BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029668
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVC7|XYP11_ARATH Xylogen-like protein 11 OS=Arabidopsis thaliana GN=XYP11 PE=1 SV=2
Length = 176
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 35 APGPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICL 94
AP P A GPS SP + CL +LN+SDC SYV GSN P+ CCPELAG+V+S+P C+
Sbjct: 25 APEPIAADGPS-SPVN-CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECV 82
Query: 95 CQLLGKNNT--YGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAP 140
C L G + +G+K+D RA +L ++CGV P +LCS+ G P +P
Sbjct: 83 CNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFPTISP 130
>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080
OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1
Length = 182
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 76/130 (58%)
Query: 37 GPSMAFGPSPSPEDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQ 96
G S +P+P DC T +LNM+DCLS+V+ G V P+ CC L +++++ CLC+
Sbjct: 28 GASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCE 87
Query: 97 LLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSG 156
+ + G+ ++IT+A LP+ C + P + C L+ P AP +PG A+ G +
Sbjct: 88 AFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGF 147
Query: 157 LAASPSNGNN 166
LA +PS+GN+
Sbjct: 148 LAPNPSSGND 157
>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820
OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1
Length = 169
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 51 DCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDI 110
DC + +LNM+DCLS+VT GS V P+ CC L +V + P CLC+ + + G+ +D+
Sbjct: 26 DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85
Query: 111 TRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNNDNAA 170
++A LPSVC V PP C L + +G P +PG P +G A +P+ + NAA
Sbjct: 86 SKAASLPSVCKVAAPPSARCGL------SVSGDPPATAPGLSPTAG-AGAPALSSGANAA 138
Query: 171 S 171
+
Sbjct: 139 T 139
>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp.
japonica GN=LTPL1 PE=1 SV=1
Length = 178
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 44 PSPSPEDDCLTKVLNMSDCLSYVTEGSNV-TVPDKPCCPELAGLVESNPI--CLCQLLGK 100
P+P+P DC + L ++DCL YVT G + P K CC E+ G ++ + CLC
Sbjct: 32 PAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAAF-T 90
Query: 101 NNTYGIKIDITRALKLPSVCGVTTPPVNLC 130
+ T + I+ITRAL LP+ CG + C
Sbjct: 91 SKTLPLPINITRALHLPAACGADASAFSKC 120
>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis
thaliana GN=At1g27950 PE=1 SV=1
Length = 193
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYG---- 105
D+C ++ CL + T T+P K CC + + E +P CLC ++ + T G
Sbjct: 33 DECNQDFQKVTLCLDFAT--GKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALK 90
Query: 106 -IKIDITRALKLPSVCGVTTPPVNLC-SLAGVPIEAP-------TGSPGPASPGTQPPSG 156
+ + + ++LP+ C + + C L G+ +P + P +P + P+
Sbjct: 91 DLGVQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPAT 150
Query: 157 LAASPSNGNNDNAASGNAGSVLCLLVGL-AVAFLI 190
A S G + +A G+A V+ L V L AV+F++
Sbjct: 151 PATSTDKGGSASAKDGHA--VVALAVALMAVSFVL 183
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 35.4 bits (80), Expect = 0.23, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 132 LAGVPIEAPTGSPGPASPGTQPPSGLAASPSNG 164
+AG P P G+ GP S G PP G +P+N
Sbjct: 607 MAGRPPRPPRGAQGPNSGGNTPPGGSPVAPTNA 639
>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2
SV=1
Length = 151
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 62 CLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIK---IDITRALKLPS 118
CL+Y+ V + CC L ++ +NP CLC+++ + + ID+ A LP+
Sbjct: 39 CLNYLNGTKEV---PQVCCNPLKSVIRNNPECLCRMISNRWSSQAERAGIDVNDAQMLPA 95
Query: 119 VCGVTTPPV 127
CG P+
Sbjct: 96 RCGEHVNPI 104
>sp|A1TJ24|ATKA_ACIAC Potassium-transporting ATPase A chain OS=Acidovorax citrulli
(strain AAC00-1) GN=kdpA PE=3 SV=1
Length = 601
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 97 LLGKNNTY-GIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPS 155
++G+ Y G KI++ R +KL SV + TP + L A V + AP G G A+PG S
Sbjct: 437 MIGRTPEYLGKKIEV-REMKLTSVAILVTPLLVLVGTA-VAVLAPAGQAGIANPGAHGFS 494
Query: 156 GLAASPSNGNNDNAAS 171
+ + ++ N+N ++
Sbjct: 495 EVLYALTSAANNNGSA 510
>sp|Q2W612|ATKA_MAGSA Potassium-transporting ATPase A chain OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=kdpA PE=3
SV=1
Length = 556
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 97 LLGKNNTY-GIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPS 155
++G+ Y G KI+ R +KL +V + PV + + G+ I P G G A+ G P
Sbjct: 389 MVGRTPEYLGKKIE-AREIKL-AVIAILATPVAVLGIGGLAITLPMGQAGIAAAG---PH 443
Query: 156 GLA----ASPSNGNNDNAASG 172
GL+ A S GNN+ +A G
Sbjct: 444 GLSEVLYAFASAGNNNGSAFG 464
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 32.7 bits (73), Expect = 1.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 126 PVNLCSLAGVPIEAPTGSPGPASPGTQPPSGLAASPSNGNN 166
PV L V AP G+PG A P +P L ++P+ G +
Sbjct: 244 PVKQLVLQPVKGSAPAGNPGAAGPPLKPAVTLTSTPTQGES 284
>sp|Q28UI7|AROA_JANSC 3-phosphoshikimate 1-carboxyvinyltransferase OS=Jannaschia sp.
(strain CCS1) GN=aroA PE=3 SV=1
Length = 450
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 62 CLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTY-------GIKIDITRAL 114
C + +TEGS+V VP+ P AGL E+ + +G + TY G + RA
Sbjct: 253 CAAIITEGSDVLVPNIGLNPTRAGLFET-----LRDMGADLTYENPREEGGEPVADLRAK 307
Query: 115 KLPSVCGVTTPPVNLCSL 132
P + G+ PP S+
Sbjct: 308 FSPDMKGIEVPPERAASM 325
>sp|E1B7X9|SMRCD_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 OS=Bos
taurus GN=SMARCAD1 PE=3 SV=2
Length = 1028
Score = 32.3 bits (72), Expect = 2.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 138 EAPTGSPGPASPGTQPPSGLAASPSNGNNDNAASGNAGS 176
EAP +P P+ PG P L+A N + + +G S
Sbjct: 19 EAPEATPQPSQPGPSSPISLSAEEENAEGEVSRAGTPDS 57
>sp|C5CPD4|ATKA_VARPS Potassium-transporting ATPase A chain OS=Variovorax paradoxus
(strain S110) GN=kdpA PE=3 SV=1
Length = 575
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 97 LLGKNNTY-GIKIDITRALKLPSVCGVTTPPVNLCSLAGVPIEAPTGSPGPASPGTQPPS 155
++G+ Y G KI++ R +KL S+ + TP + L A V + A G G A+PG S
Sbjct: 412 MIGRTPEYLGKKIEV-REMKLISIAILVTPVLVLAGTA-VAVLAGAGKAGIANPGAHGFS 469
Query: 156 GLAASPSNGNNDN 168
+ + S+ N+N
Sbjct: 470 EILYALSSAANNN 482
>sp|Q5RAG2|ESYT1_PONAB Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 PE=2 SV=2
Length = 1104
Score = 31.6 bits (70), Expect = 3.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 136 PIEAPTGSP-GPASPGTQPPSGLAASPSNGNNDNAASGNAGSVLCLLVGLAVAFLI 190
P +PT P P+ P QPP+ A A G AG L +L L+
Sbjct: 9 PSPSPTDQPSAPSDPTGQPPAAHAKPDPGSGGQPAGPGAAGEALAVLTSFGKRLLV 64
>sp|O36393|HELI_ALHV1 Probable ATP-dependent helicase 44 OS=Alcelaphine herpesvirus 1
(strain C500) GN=44 PE=3 SV=1
Length = 783
Score = 30.8 bits (68), Expect = 5.3, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 60 SDCLSYVTEGSNVTVPDKPCCPELAGLVESNPI 92
SDC SY++ +N+ +P+ C P + L S P+
Sbjct: 507 SDCASYISALNNIPIPEVLCAPAHSELACSEPL 539
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,225,280
Number of Sequences: 539616
Number of extensions: 3846650
Number of successful extensions: 15133
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 14736
Number of HSP's gapped (non-prelim): 562
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)