Query 029668
Match_columns 190
No_of_seqs 140 out of 970
Neff 5.0
Searched_HMMs 29240
Date Tue Mar 26 18:14:03 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/029668.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2290-2294//hhsearch_pdb/029668hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 1.0 1 1 118.5 0.3 83 49-134 1-92 (93)
2 2alg_A Non-specific lipid tran 1.0 1 1 108.9 -0.3 79 50-133 2-91 (92)
3 1afh_A Maize nonspecific lipid 1.0 1 1 106.9 1.4 80 50-133 2-92 (93)
4 1bwo_A NS-LTP1, nonspecific li 1.0 1 1 105.5 0.5 78 50-133 1-90 (90)
5 1siy_A LTP 1, NS-LTP1, nonspec 1.0 1 1 104.5 0.7 78 50-133 1-90 (91)
6 1t12_A LTP 1, nonspecific lipi 1.0 1 1 104.2 0.7 77 50-133 2-90 (91)
7 2rkn_A DIR1 protein, AT5G48485 1.0 1 1 95.6 0.5 72 49-126 2-75 (77)
8 1l6h_A LTP2, non-specific lipi 1.0 1 1 86.8 0.2 64 57-131 6-69 (69)
9 1n89_A Lipid transfer protein; 1.0 1 1 86.4 1.1 61 57-125 5-65 (67)
10 3ob4_A Conglutin, maltose ABC 1.0 1 1 41.1 -4.8 81 49-132 370-490 (500)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=1.00 E-value=1 Score=118.49 Aligned_cols=83 Identities=27% Similarity=0.539 Sum_probs=70.6
Q ss_pred CCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 99845411061047778728999999993128999823408-----9863250035888667667988985201214999
Q 029668 49 EDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-----NPICLCQLLGKNNTYGIKIDITRALKLPSVCGVT 123 (190)
Q Consensus 49 ~~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-----~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~ 123 (190)
..+|.+++..|+||++|+++++ .|+..||+++++|+.. |++|+|+++++......+||.+|+..||++|||+
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~---~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~ 77 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGP---GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVN 77 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSS---CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCC---CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
T ss_conf 9878999989885899983999---9998303479999998258643999999387640126776889998514743778
Q ss_pred CC----CCCCCCCCC
Q ss_conf 99----988999898
Q 029668 124 TP----PVNLCSLAG 134 (190)
Q Consensus 124 ~p----P~s~C~~~g 134 (190)
+| |.+||+++.
T Consensus 78 ~p~~Is~~~dC~~v~ 92 (93)
T 2ljo_A 78 IPYKISTTTNCNTVK 92 (93)
T ss_dssp CSSCCSTTCCGGGCC
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 999888888888878
No 2
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=1.00 E-value=1 Score=108.89 Aligned_cols=79 Identities=22% Similarity=0.501 Sum_probs=66.2
Q ss_pred CCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCC-------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 98454110610477787289999999931289998234-------08986325003588866766798898520121499
Q 029668 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLV-------ESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (190)
Q Consensus 50 ~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~-------~~~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv 122 (190)
.+|.+++..|+||++|+++++ .|+..||++|++++ +.++.|+|.+... ..++ +||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~---~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~-~~~~-~in~~~A~~LP~~Cgv 76 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLS-ASVP-GVNPNNAAALPGKCGV 76 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHH-HHST-TCCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHCCCCHHHHCCCC---CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCC-CCCHHHHHHHHHHCCC
T ss_conf 874788875267488880899---9888999989999866046677886773546766-5467-6584889998887689
Q ss_pred CCC----CCCCCCCC
Q ss_conf 999----98899989
Q 029668 123 TTP----PVNLCSLA 133 (190)
Q Consensus 123 ~~p----P~s~C~~~ 133 (190)
++| +.+||+++
T Consensus 77 ~~p~~is~~~dC~~v 91 (92)
T 2alg_A 77 SIPYKISASTNCATV 91 (92)
T ss_dssp CCSSCSSTTSCGGGC
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 989998778778668
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=1.00 E-value=1 Score=106.90 Aligned_cols=80 Identities=24% Similarity=0.503 Sum_probs=65.4
Q ss_pred CCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 9845411061047778728999999993128999823408-------986325003588866766798898520121499
Q 029668 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKNNTYGIKIDITRALKLPSVCGV 122 (190)
Q Consensus 50 ~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-------~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv 122 (190)
.+|.+++..|+||++|+++++ ..|+..||++|+++++. +..|+|..... ..++ +||.++|+.||++||+
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~-~~~~-~in~~~A~~LP~~C~v 77 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAA-AGVS-GLNAGNAASIPSKCGV 77 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSC--CSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHH-TTST-TCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCCHHHHCCCC--CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC-CCCC-CCCHHHHHHHHHHCCC
T ss_conf 876888876047488881899--99869998989998876137888866487443666-5456-7698999999997689
Q ss_pred CCC----CCCCCCCC
Q ss_conf 999----98899989
Q 029668 123 TTP----PVNLCSLA 133 (190)
Q Consensus 123 ~~p----P~s~C~~~ 133 (190)
++| +.+||+++
T Consensus 78 ~~p~~is~~~dC~~v 92 (93)
T 1afh_A 78 SIPYTISTSTDCSRV 92 (93)
T ss_dssp CCSSCCSTTCCSSSC
T ss_pred CCCCCCCCCCCCCCC
T ss_conf 989998877777668
No 4
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=1.00 E-value=1 Score=105.52 Aligned_cols=78 Identities=28% Similarity=0.496 Sum_probs=63.5
Q ss_pred CCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCCCCC-CCCCCCCCHHHHHHHHCCCC
Q ss_conf 9845411061047778728999999993128999823408-------986325003588-86676679889852012149
Q 029668 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKN-NTYGIKIDITRALKLPSVCG 121 (190)
Q Consensus 50 ~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-------~~~CLC~~l~~~-~~lg~~In~trA~~LP~~Cg 121 (190)
.+|++++..|+||++|+++++ .|+..||++|+++++. +..|+|. ++. ..++ +||.++|+.||++||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~---~Ps~~CC~~lk~l~~~a~t~~dr~~~ClCl--k~~~~~~~-~in~~~A~~LP~~C~ 74 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGP---GPSGQCCDGVKNLHNQARSQSDRQSACNCL--KGIARGIH-NLNEDNARSIPPKCG 74 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCS---CCCHHHHHHHHHHHHHCCSHHHHHHHHHHH--HHHHTTCT-TCCHHHHHTHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHCCCC---CCCHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCHHCCC-CCCHHHHHHHHHHCC
T ss_conf 987888886036388882899---988799587899876404778887637672--57500058-869999999999769
Q ss_pred CCCC----CCCCCCCC
Q ss_conf 9999----98899989
Q 029668 122 VTTP----PVNLCSLA 133 (190)
Q Consensus 122 v~~p----P~s~C~~~ 133 (190)
+++| +.+||+++
T Consensus 75 v~~p~~is~~~dC~~v 90 (90)
T 1bwo_A 75 VNLPYTISLNIDCSRV 90 (90)
T ss_dssp CCCSSCCCTTCCGGGC
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 9999998877888879
No 5
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=1.00 E-value=1 Score=104.52 Aligned_cols=78 Identities=24% Similarity=0.579 Sum_probs=64.0
Q ss_pred CCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCCCCC-CCCCCCCCHHHHHHHHCCCC
Q ss_conf 9845411061047778728999999993128999823408-------986325003588-86676679889852012149
Q 029668 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKN-NTYGIKIDITRALKLPSVCG 121 (190)
Q Consensus 50 ~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-------~~~CLC~~l~~~-~~lg~~In~trA~~LP~~Cg 121 (190)
.+|.+++..|+||++|+++++ .|+..||++|+++++. +..|+|. ++. ..++ +||.++|+.||++||
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~---~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~~~~~~-~in~~~A~~LP~~Cg 74 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGG---VVPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAAGAVR-GINPNNAEALPGKCG 74 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCS---CCCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHHTTCCS-SCCHHHHHHHHHHHT
T ss_pred CCHHHHHHHCCCCHHHHHCCC---CCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCCCCCC-CCCHHHHHHHHHHCC
T ss_conf 987788776057389880899---986799888899876503678887678066--77622257-759999999999769
Q ss_pred CCCC----CCCCCCCC
Q ss_conf 9999----98899989
Q 029668 122 VTTP----PVNLCSLA 133 (190)
Q Consensus 122 v~~p----P~s~C~~~ 133 (190)
+++| +.+||+++
T Consensus 75 v~~p~~is~~~dC~~v 90 (91)
T 1siy_A 75 VNIPYKISTSTNCNSI 90 (91)
T ss_dssp CCCSSCSCTTSCSSTT
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 9989998878778668
No 6
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=1.00 E-value=1 Score=104.24 Aligned_cols=77 Identities=31% Similarity=0.635 Sum_probs=64.1
Q ss_pred CCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC-------CCCCCCCCCCCC-CCCCCCCCHHHHHHHHCCCC
Q ss_conf 9845411061047778728999999993128999823408-------986325003588-86676679889852012149
Q 029668 50 DDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVES-------NPICLCQLLGKN-NTYGIKIDITRALKLPSVCG 121 (190)
Q Consensus 50 ~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~-------~~~CLC~~l~~~-~~lg~~In~trA~~LP~~Cg 121 (190)
.+|.+++..|+||++|+++++ . |+ .||++|+++++. ++.|+|. ++. ..++ +||.++|+.||++||
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~--~-P~-~CC~gv~~l~~~a~t~~dr~~~ClCl--k~~~~~~~-~in~~~A~~LP~~C~ 74 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTG--P-LG-RCCGGVKALVNSARTTEDRQIACTCL--KSAAGAIS-GINLGKAAGLPSTCG 74 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSS--C-CT-THHHHHHHHHHTTCSTHHHHHHHHHH--HHHHHHCT-TCCHHHHHHHHHHTT
T ss_pred CCHHHHHHHCCCCHHHHCCCC--C-HH-HHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCCC-CCCHHHHHHHHHHCC
T ss_conf 776788876047289882899--7-69-99999999986405778887568874--46522157-768068988888768
Q ss_pred CCCC----CCCCCCCC
Q ss_conf 9999----98899989
Q 029668 122 VTTP----PVNLCSLA 133 (190)
Q Consensus 122 v~~p----P~s~C~~~ 133 (190)
+++| +.+||+++
T Consensus 75 v~~p~~is~~~dC~~v 90 (91)
T 1t12_A 75 VNIPYKISPSTDCSKV 90 (91)
T ss_dssp CCCSSCSSSSSCCTTC
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 9989998877777668
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=95.61 Aligned_cols=72 Identities=28% Similarity=0.614 Sum_probs=61.1
Q ss_pred CCCCHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 99845411061047778728999999993128999823408986325003588--8667667988985201214999999
Q 029668 49 EDDCLTKVLNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKN--NTYGIKIDITRALKLPSVCGVTTPP 126 (190)
Q Consensus 49 ~~~C~~~l~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~~~~CLC~~l~~~--~~lg~~In~trA~~LP~~Cgv~~pP 126 (190)
..+|.+++.+|++|++|+++++ ...|+..||++||+ .|+.|||.+++++ ..+ +||.++|+.||++||+++|+
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~-~~~Ps~~CC~~lk~---~~~~ClC~~~~~~~~~~~--gin~~~A~~LP~~Cgv~~p~ 75 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKEN-PTSPSQPCCTALQH---ADFACLCGYKNSPWLGSF--GVDPELASALPKQCGLANAP 75 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSS-CCCCCHHHHHHHTT---CCHHHHHTTTTCHHHHHH--TBCHHHHHHHHHHTTCSCCC
T ss_pred CCHHHHHHHHHHHCHHHHCCCC-CCCCCHHHHHHHHH---CCCCCCCCCCCCCCHHHC--CCCHHHHHHHHHHCCCCCCC
T ss_conf 5617768886750799881899-99988899999984---696883722177404641--75999999999986999999
No 8
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=1.00 E-value=1 Score=86.77 Aligned_cols=64 Identities=28% Similarity=0.657 Sum_probs=54.2
Q ss_pred CCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 061047778728999999993128999823408986325003588866766798898520121499999988999
Q 029668 57 LNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTPPVNLCS 131 (190)
Q Consensus 57 ~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~~pP~s~C~ 131 (190)
..|.+|++||++++ .|+.+||++||+ +..|+|+++++. .++..||.++|+.||++||+++| +|+
T Consensus 6 ~~L~pC~~~v~~~~---~Ps~~CC~~lk~----~~~ClC~~~k~~-~~~~~in~~~A~~Lp~~Cgv~~P---~C~ 69 (69)
T 1l6h_A 6 GQLTVCTGAIAGGA---RPTAACCSSLRA----QQGCFCQFAKDP-RYGRYVNSPNARKAVSSCGIALP---TCH 69 (69)
T ss_dssp TTHHHHHHHHTTCC---STTHHHHHHHHH----HHHHHHHHTTCS-SHHHHTTTTTGGGCCCCCSSCSC---CCC
T ss_pred HHCCCCHHHHCCCC---CCCHHHHHHHCC----CCCCCCCCCCCC-CCCCCCCHHHHHHHHHHCCCCCC---CCC
T ss_conf 21345889882898---988799996677----887879203583-30025598999999997699999---989
No 9
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=1.00 E-value=1 Score=86.44 Aligned_cols=61 Identities=30% Similarity=0.617 Sum_probs=52.7
Q ss_pred CCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 061047778728999999993128999823408986325003588866766798898520121499999
Q 029668 57 LNMSDCLSYVTEGSNVTVPDKPCCPELAGLVESNPICLCQLLGKNNTYGIKIDITRALKLPSVCGVTTP 125 (190)
Q Consensus 57 ~~LspCl~YVt~gs~~~~Ps~~CC~aLk~l~~~~~~CLC~~l~~~~~lg~~In~trA~~LP~~Cgv~~p 125 (190)
..|.+|++||++++ .|+.+||++||+ +..|+|+++++. .++..||.++|+.||++|||++|
T Consensus 5 ~~L~pC~~~v~~~~---~Ps~~CC~~lk~----~~~ClC~~~k~~-~~~~~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 5 SQLAVCASAILSGA---KPSGECCGNLRA----QQGCFCQYAKDP-TYGQYIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp STTHHHHHHHTTCC---CCCHHHHHHHHH----HSSHHHHGGGCS-TTHHHHTCHHHHHHHHHHTSCCS
T ss_pred HHCCCCHHHHCCCC---CCCHHHHHHHCC----CCCCCCCCCCCC-CCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 12455788881899---988799996677----787879203584-30135598999999997699999
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=1.00 E-value=1 Score=41.12 Aligned_cols=81 Identities=21% Similarity=0.456 Sum_probs=50.8
Q ss_pred CCCCHHHHC--CCCCCHHHHHCC----CCCC------------------CCC-------HHHHHHHHHCCCCCCCCCCCC
Q ss_conf 998454110--610477787289----9999------------------999-------312899982340898632500
Q 029668 49 EDDCLTKVL--NMSDCLSYVTEG----SNVT------------------VPD-------KPCCPELAGLVESNPICLCQL 97 (190)
Q Consensus 49 ~~~C~~~l~--~LspCl~YVt~g----s~~~------------------~Ps-------~~CC~aLk~l~~~~~~CLC~~ 97 (190)
.+.|...+. +|.+|..|+... +... .+. ..||+.|+.+-+ +++|.|+.
T Consensus 370 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cc~~l~~~~~-~~~c~c~~ 448 (500)
T 3ob4_A 370 ARRCQSQLERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFEN-NQRCMCEA 448 (500)
T ss_dssp SCCHHHHHHHCCCHHHHHHHHHHHHTTSCC--CCCSSTTSCC---------------CHHHHHHHHGGGTT-CHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCHH
T ss_conf 99999998761687479999998641421001589996779999984356797643689999999972775-55556589
Q ss_pred CCCC-C-CC-------CCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 3588-8-66-------7667988985201214999999889998
Q 029668 98 LGKN-N-TY-------GIKIDITRALKLPSVCGVTTPPVNLCSL 132 (190)
Q Consensus 98 l~~~-~-~l-------g~~In~trA~~LP~~Cgv~~pP~s~C~~ 132 (190)
+... + .. ....=..+|..||..||+.. ...|..
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~--~~~c~~ 490 (500)
T 3ob4_A 449 LQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRA--PQRCDL 490 (500)
T ss_dssp HHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCC--CSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC--CCCCCC
T ss_conf 999999999876667789999999863714109998--753776
Done!