Your job contains 1 sequence.
>029670
MSINIVVAMAGLEVHHSSHQQFEPMSTSCKADEIFSTPSYSHLADREFLVTEESTNHNGS
TELLRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVN
QVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICRFVYVLLL
LAHHFEPFWG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029670
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179474 - symbol:AT5G25560 species:3702 "Arabi... 542 2.7e-52 1
TAIR|locus:2172656 - symbol:AT5G22920 species:3702 "Arabi... 490 8.8e-47 1
TAIR|locus:2099212 - symbol:AT3G62970 species:3702 "Arabi... 429 2.6e-40 1
TAIR|locus:2180074 - symbol:MIEL1 "MYB30-Interacting E3 L... 419 2.9e-39 1
FB|FBgn0031816 - symbol:CG16947 species:7227 "Drosophila ... 278 4.3e-24 1
DICTYBASE|DDB_G0281595 - symbol:rchy "RING finger and CHY... 275 5.3e-24 1
ZFIN|ZDB-GENE-040801-73 - symbol:rchy1 "ring finger and C... 273 8.7e-24 1
POMBASE|SPAC2F3.16 - symbol:SPAC2F3.16 "ubiquitin-protein... 272 1.9e-23 1
UNIPROTKB|J3KQJ2 - symbol:RCHY1 "RING finger and CHY zinc... 265 6.1e-23 1
UNIPROTKB|Q96PM5 - symbol:RCHY1 "RING finger and CHY zinc... 265 6.1e-23 1
UNIPROTKB|A4IFE2 - symbol:RCHY1 "RCHY1 protein" species:9... 263 1.0e-22 1
UNIPROTKB|J9NZR5 - symbol:RCHY1 "Uncharacterized protein"... 261 1.6e-22 1
MGI|MGI:1915348 - symbol:Rchy1 "ring finger and CHY zinc ... 261 1.6e-22 1
RGD|1359180 - symbol:Rchy1 "ring finger and CHY zinc fing... 260 2.1e-22 1
UNIPROTKB|D6RAF6 - symbol:RCHY1 "RING finger and CHY zinc... 251 1.9e-21 1
CGD|CAL0003730 - symbol:orf19.4658 species:5476 "Candida ... 241 3.0e-19 1
UNIPROTKB|Q5AMI8 - symbol:HYZ99 "Putative uncharacterized... 241 3.0e-19 1
TAIR|locus:2011266 - symbol:AT1G18910 species:3702 "Arabi... 240 7.6e-19 1
TAIR|locus:2089678 - symbol:BTS "BRUTUS" species:3702 "Ar... 237 1.6e-18 1
TAIR|locus:2027176 - symbol:AT1G74770 species:3702 "Arabi... 235 2.6e-18 1
UNIPROTKB|E7ETW5 - symbol:RCHY1 "RING finger and CHY zinc... 221 2.8e-18 1
UNIPROTKB|J9P7H1 - symbol:RCHY1 "Uncharacterized protein"... 218 5.8e-18 1
ASPGD|ASPL0000053938 - symbol:AN10185 species:162425 "Eme... 224 8.8e-18 1
UNIPROTKB|H0YAI4 - symbol:RCHY1 "RING finger and CHY zinc... 216 9.5e-18 1
UNIPROTKB|E7EMC8 - symbol:RCHY1 "RING finger and CHY zinc... 152 5.8e-11 1
UNIPROTKB|J3KPI0 - symbol:RCHY1 "RING finger and CHY zinc... 152 5.8e-11 1
UNIPROTKB|F1RYV2 - symbol:RCHY1 "Uncharacterized protein"... 146 2.5e-10 1
UNIPROTKB|F1P5N8 - symbol:RCHY1 "Uncharacterized protein"... 135 5.4e-09 1
CGD|CAL0003215 - symbol:orf19.6555 species:5476 "Candida ... 98 5.2e-05 1
DICTYBASE|DDB_G0270180 - symbol:DDB_G0270180 "Helper of T... 89 0.00057 1
ASPGD|ASPL0000051109 - symbol:AN1900 species:162425 "Emer... 111 0.00082 1
>TAIR|locus:2179474 [details] [associations]
symbol:AT5G25560 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AC006601
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:At.30900 eggNOG:NOG325406 InterPro:IPR017921
PROSITE:PS51270 HOGENOM:HOG000231827 KO:K10144 IPI:IPI00846535
RefSeq:NP_001078621.1 ProteinModelPortal:A8MQ89 SMR:A8MQ89
STRING:A8MQ89 EnsemblPlants:AT5G25560.2 GeneID:832631
KEGG:ath:AT5G25560 TAIR:At5g25560 OMA:HSINEES PhylomeDB:A8MQ89
ProtClustDB:CLSN2681068 Genevestigator:A8MQ89 Uniprot:A8MQ89
Length = 328
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 103/170 (60%), Positives = 122/170 (71%)
Query: 9 MAGLEVHHSSHQQFEPMSTSCKADEIFSTPSYSHLADREFLVTEESTNHNGSTE-----L 63
M + +H + QQ + MS K + S S+ H + E +E ST + E +
Sbjct: 1 MGDVYFNHFA-QQLQ-MSDQEKGE--MSRHSHPHSINEE---SESSTLERVAAESLTNKV 53
Query: 64 LRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVI 123
L +G MEYGC HYRRRC IRAPCCNEIF C HCH EA NNINVDQK RHDIPRH+V QVI
Sbjct: 54 LDRGLMEYGCPHYRRRCCIRAPCCNEIFGCHHCHYEAKNNINVDQKQRHDIPRHQVEQVI 113
Query: 124 CSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
C LCGTEQ+V Q+C++CGVCMG+YFC+ CKL+DDDTSKKQYHCDGCGICR
Sbjct: 114 CLLCGTEQEVGQICIHCGVCMGKYFCKVCKLYDDDTSKKQYHCDGCGICR 163
>TAIR|locus:2172656 [details] [associations]
symbol:AT5G22920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AB005243 Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270
HOGENOM:HOG000231827 KO:K10144 OMA:CGSYNTA EMBL:AY052362
EMBL:BT002635 EMBL:DQ059131 IPI:IPI00531172 RefSeq:NP_197683.1
UniGene:At.19948 ProteinModelPortal:Q9FFB6 SMR:Q9FFB6 STRING:Q9FFB6
EnsemblPlants:AT5G22920.1 GeneID:832356 KEGG:ath:AT5G22920
TAIR:At5g22920 InParanoid:Q9FFB6 PhylomeDB:Q9FFB6
ProtClustDB:CLSN2686096 Genevestigator:Q9FFB6 Uniprot:Q9FFB6
Length = 291
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 80/121 (66%), Positives = 96/121 (79%)
Query: 53 ESTNHNGSTELLRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRH 112
E+ + L+ G YGC HYRRRC+IRAPCC+EIFDCRHCHNEA ++++++Q RH
Sbjct: 7 ENEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIEQHHRH 66
Query: 113 DIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGIC 172
++PRHEV++VICSLC TEQ VQQ C NCGVCMG+YFC CK FDDD SKKQYHCD CGIC
Sbjct: 67 ELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCDECGIC 126
Query: 173 R 173
R
Sbjct: 127 R 127
>TAIR|locus:2099212 [details] [associations]
symbol:AT3G62970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039
EMBL:CP002686 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:2.20.28.10 InterPro:IPR017921
PROSITE:PS51270 KO:K10144 IPI:IPI00526827 RefSeq:NP_191856.4
UniGene:At.34017 ProteinModelPortal:F4IZL5 SMR:F4IZL5
EnsemblPlants:AT3G62970.1 GeneID:825472 KEGG:ath:AT3G62970
OMA:QYRCPIC Uniprot:F4IZL5
Length = 287
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 69/107 (64%), Positives = 86/107 (80%)
Query: 67 GFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSL 126
G ++GC+HY+RRC+IRAPCCN IF CRHCHN++ N++ D K RHD+ R V QV+CS+
Sbjct: 29 GKFQFGCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSLP-DPKERHDLVRQNVKQVVCSI 87
Query: 127 CGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
C TEQ+V +VC NCGV MGEYFC+ CK FDDD SK+Q+HCD CGICR
Sbjct: 88 CQTEQEVAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDCGICR 134
>TAIR|locus:2180074 [details] [associations]
symbol:MIEL1 "MYB30-Interacting E3 Ligase 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:2.20.28.10
eggNOG:NOG325406 InterPro:IPR017921 PROSITE:PS51270
HOGENOM:HOG000231827 KO:K10144 EMBL:AY064060 EMBL:AY096370
IPI:IPI00537535 RefSeq:NP_197366.1 UniGene:At.20087
ProteinModelPortal:Q8VZK0 SMR:Q8VZK0 IntAct:Q8VZK0 STRING:Q8VZK0
EnsemblPlants:AT5G18650.1 GeneID:831983 KEGG:ath:AT5G18650
TAIR:At5g18650 InParanoid:Q8VZK0 OMA:IEATIMP PhylomeDB:Q8VZK0
ProtClustDB:CLSN2686576 ArrayExpress:Q8VZK0 Genevestigator:Q8VZK0
Uniprot:Q8VZK0
Length = 267
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 70/111 (63%), Positives = 85/111 (76%)
Query: 64 LRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNI-NVDQKLRHDIPRHEVNQV 122
L G M +GC+HY+RRC+IRAPCCNE+FDCRHCHNE+ + + N+ RHD+ R +V QV
Sbjct: 9 LHFGKMGFGCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLRNIYD--RHDLVRQDVKQV 66
Query: 123 ICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
ICS+C TEQ QVC NCGV MGEYFC C +DDDT K+Q+HCD CGICR
Sbjct: 67 ICSVCDTEQPAAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCGICR 117
>FB|FBgn0031816 [details] [associations]
symbol:CG16947 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039 EMBL:AE014134
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270
GeneTree:ENSGT00390000008853 EMBL:BT088896 RefSeq:NP_609030.1
UniGene:Dm.8556 SMR:Q9VMD4 IntAct:Q9VMD4 MINT:MINT-290684
STRING:Q9VMD4 EnsemblMetazoa:FBtr0079271 EnsemblMetazoa:FBtr0331186
GeneID:33901 KEGG:dme:Dmel_CG16947 UCSC:CG16947-RA
FlyBase:FBgn0031816 InParanoid:Q9VMD4 OMA:TNTKEPN OrthoDB:EOG4FTTG2
GenomeRNAi:33901 NextBio:785834 Uniprot:Q9VMD4
Length = 433
Score = 278 (102.9 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 49/105 (46%), Positives = 63/105 (60%)
Query: 69 MEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCG 128
+ +GC HY+RR PCCN+ + CR CH+E N H R + ++ICS C
Sbjct: 180 LRFGCAHYKRRAMFVTPCCNKFYKCRFCHDE--NET-------HHFDRKTLTELICSECN 230
Query: 129 TEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
T Q V++ C+NCGV G+Y C C LFDD K+QYHC GCGICR
Sbjct: 231 TRQTVREQCLNCGVRFGKYTCLICNLFDD-ADKQQYHCHGCGICR 274
>DICTYBASE|DDB_G0281595 [details] [associations]
symbol:rchy "RING finger and CHY zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 dictyBase:DDB_G0281595
GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000042 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:2.20.28.10 eggNOG:NOG325406
InterPro:IPR017921 PROSITE:PS51270 OMA:CGSYNTA RefSeq:XP_640522.1
ProteinModelPortal:Q54TR9 STRING:Q54TR9 EnsemblProtists:DDB0204548
GeneID:8623132 KEGG:ddi:DDB_G0281595 InParanoid:Q54TR9
Uniprot:Q54TR9
Length = 342
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C+I+A CC I+ CR CH A + +N +H+I RH +V+C C T Q
Sbjct: 32 GCKHYARNCKIKAACCGRIYVCRLCH--ADDPVN----FKHEINRHATKEVLCMFCQTLQ 85
Query: 132 KVQQVCVN--CGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
V + C+N C YFC+ CK +DD +KK YHCD CGICR
Sbjct: 86 PVSKQCINNDCNKEFARYFCDVCKFYDDSPTKKIYHCDKCGICR 129
>ZFIN|ZDB-GENE-040801-73 [details] [associations]
symbol:rchy1 "ring finger and CHY zinc finger domain
containing 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184
InterPro:IPR004039 ZFIN:ZDB-GENE-040801-73 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270 CTD:25898
HOVERGEN:HBG062959 KO:K10144 EMBL:AF262047 IPI:IPI00497938
RefSeq:NP_997765.1 UniGene:Dr.12392 ProteinModelPortal:Q90ZZ0
SMR:Q90ZZ0 STRING:Q90ZZ0 GeneID:321875 KEGG:dre:321875
InParanoid:Q90ZZ0 NextBio:20807566 ArrayExpress:Q90ZZ0
Uniprot:Q90ZZ0
Length = 264
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 48/102 (47%), Positives = 63/102 (61%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC + + CR CH D + H + R +V +V C++C T Q
Sbjct: 7 GCEHYVRSCLLKAPCCGKFYVCRLCH---------DAEETHQMDRFKVQEVKCAVCNTIQ 57
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
+ QQ+C C V GEY+C+ C LFD D KKQYHC CGICR
Sbjct: 58 EAQQICKECEVKFGEYYCDICHLFDKD--KKQYHCQPCGICR 97
>POMBASE|SPAC2F3.16 [details] [associations]
symbol:SPAC2F3.16 "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039
PomBase:SPAC2F3.16 Prosite:PS00518 EMBL:CU329670 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HSSP:Q13049 Gene3D:2.20.28.10 PIR:T38548 RefSeq:NP_594394.1
ProteinModelPortal:O14099 SMR:O14099 EnsemblFungi:SPAC2F3.16.1
GeneID:2541608 KEGG:spo:SPAC2F3.16 eggNOG:NOG325406 OMA:HECSERG
OrthoDB:EOG4M9519 NextBio:20802702 InterPro:IPR017921
PROSITE:PS51270 Uniprot:O14099
Length = 425
Score = 272 (100.8 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 45/102 (44%), Positives = 59/102 (57%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC HY R C+++ C+E + CRHCHN+A + H + R V ++C +C Q
Sbjct: 141 GCSHYMRNCKVQCFDCHEWYTCRHCHNDACD---------HVLERPAVENMLCMICSKVQ 191
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
Q C C CMG Y+C CKL+DDD +K YHCD CGICR
Sbjct: 192 PAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICR 233
>UNIPROTKB|J3KQJ2 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017921
PROSITE:PS51270 EMBL:AC096759 RefSeq:NP_001008925.1
UniGene:Hs.48297 GeneID:25898 KEGG:hsa:25898 CTD:25898
HGNC:HGNC:17479 KO:K10144 ChiTaRS:RCHY1 ProteinModelPortal:J3KQJ2
Ensembl:ENST00000451788 Uniprot:J3KQJ2
Length = 200
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/102 (46%), Positives = 61/102 (59%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH+ N D H + R +V +V C C Q
Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
QQ C C GEY+C+ C LFD D KKQYHC+ CGICR
Sbjct: 70 HAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICR 109
>UNIPROTKB|Q96PM5 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0002039 "p53
binding" evidence=IPI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0031398 "positive
regulation of protein ubiquitination" evidence=IDA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR004039 Prosite:PS00518 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH471057 GO:GO:0031398
GO:GO:0004842 GO:GO:0032436 Pathway_Interaction_DB:ar_tf_pathway
GO:GO:0000151 GO:GO:0042787 GO:GO:0051865 BRENDA:6.3.2.19
Gene3D:2.20.28.10 eggNOG:NOG325406 InterPro:IPR017921
PROSITE:PS51270 EMBL:GQ250944 EMBL:AF247041 EMBL:AF255666
EMBL:AF305424 EMBL:AB209072 EMBL:AY888047 EMBL:AK091501
EMBL:AC096759 EMBL:BC047393 IPI:IPI00289787 IPI:IPI00552384
IPI:IPI00552504 RefSeq:NP_001008925.1 RefSeq:NP_001009922.1
RefSeq:NP_056251.2 UniGene:Hs.48297 PDB:2JRJ PDB:2K2C PDB:2K2D
PDBsum:2JRJ PDBsum:2K2C PDBsum:2K2D ProteinModelPortal:Q96PM5
SMR:Q96PM5 DIP:DIP-43981N IntAct:Q96PM5 MINT:MINT-3057007
STRING:Q96PM5 PhosphoSite:Q96PM5 DMDM:32700008
REPRODUCTION-2DPAGE:Q96PM5 PaxDb:Q96PM5 PRIDE:Q96PM5 DNASU:25898
Ensembl:ENST00000324439 Ensembl:ENST00000505105
Ensembl:ENST00000513257 GeneID:25898 KEGG:hsa:25898 UCSC:uc003hij.3
UCSC:uc003hil.3 CTD:25898 GeneCards:GC04M076405 HGNC:HGNC:17479
HPA:HPA030339 MIM:607680 neXtProt:NX_Q96PM5 PharmGKB:PA38240
HOGENOM:HOG000231827 HOVERGEN:HBG062959 InParanoid:Q96PM5 KO:K10144
OMA:QYHCNGC OrthoDB:EOG4JWVDX PhylomeDB:Q96PM5 ChiTaRS:RCHY1
EvolutionaryTrace:Q96PM5 GenomeRNAi:25898 NextBio:47351
ArrayExpress:Q96PM5 Bgee:Q96PM5 CleanEx:HS_RCHY1
Genevestigator:Q96PM5 GermOnline:ENSG00000163743 Uniprot:Q96PM5
Length = 261
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 47/102 (46%), Positives = 61/102 (59%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH+ N D H + R +V +V C C Q
Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
QQ C C GEY+C+ C LFD D KKQYHC+ CGICR
Sbjct: 70 HAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICR 109
>UNIPROTKB|A4IFE2 [details] [associations]
symbol:RCHY1 "RCHY1 protein" species:9913 "Bos taurus"
[GO:0051865 "protein autoubiquitination" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0032436
GO:GO:0000151 GO:GO:0042787 GO:GO:0051865 Gene3D:2.20.28.10
eggNOG:NOG325406 InterPro:IPR017921 PROSITE:PS51270 CTD:25898
HOGENOM:HOG000231827 HOVERGEN:HBG062959 KO:K10144 OrthoDB:EOG4JWVDX
GeneTree:ENSGT00390000008853 OMA:CGSYNTA EMBL:DAAA02018118
EMBL:BC134539 IPI:IPI00701961 RefSeq:NP_001077223.1
UniGene:Bt.13497 SMR:A4IFE2 STRING:A4IFE2
Ensembl:ENSBTAT00000009461 GeneID:540733 KEGG:bta:540733
InParanoid:A4IFE2 NextBio:20878802 Uniprot:A4IFE2
Length = 261
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 47/102 (46%), Positives = 60/102 (58%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH+ N D H + R +V +V C C Q
Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
QQ C C GEY+C C LFD D KKQYHC+ CGICR
Sbjct: 70 HAQQTCEECSTLFGEYYCSVCHLFDKD--KKQYHCENCGICR 109
>UNIPROTKB|J9NZR5 [details] [associations]
symbol:RCHY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001878 InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184 SMART:SM00343
InterPro:IPR004039 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 CTD:25898 KO:K10144
GeneTree:ENSGT00390000008853 OMA:CGSYNTA EMBL:AAEX03016672
RefSeq:XP_855781.3 Ensembl:ENSCAFT00000047092 GeneID:612746
KEGG:cfa:612746 Uniprot:J9NZR5
Length = 259
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 47/102 (46%), Positives = 60/102 (58%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH+ N D H + R +V +V C C Q
Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
QQ C C GEY+C C LFD D KKQYHC+ CGICR
Sbjct: 70 HAQQSCEECSTLFGEYYCSICHLFDKD--KKQYHCENCGICR 109
>MGI|MGI:1915348 [details] [associations]
symbol:Rchy1 "ring finger and CHY zinc finger domain
containing 1" species:10090 "Mus musculus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO] [GO:0002039 "p53 binding"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=ISO] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR004039 MGI:MGI:1915348 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
GO:GO:0032436 GO:GO:0000151 GO:GO:0042787 GO:GO:0051865
BRENDA:6.3.2.19 Gene3D:2.20.28.10 eggNOG:NOG325406
InterPro:IPR017921 PROSITE:PS51270 CTD:25898 HOGENOM:HOG000231827
HOVERGEN:HBG062959 KO:K10144 OrthoDB:EOG4JWVDX ChiTaRS:RCHY1
EMBL:AF071222 EMBL:AF276959 EMBL:AF305423 EMBL:AK018364
EMBL:AK018488 EMBL:AK078397 EMBL:BC057143 IPI:IPI00133161
RefSeq:NP_080833.1 UniGene:Mm.159453 PDB:2DKT PDB:2ECM PDBsum:2DKT
PDBsum:2ECM ProteinModelPortal:Q9CR50 SMR:Q9CR50 STRING:Q9CR50
PhosphoSite:Q9CR50 PaxDb:Q9CR50 PRIDE:Q9CR50
Ensembl:ENSMUST00000031345 GeneID:68098 KEGG:mmu:68098
UCSC:uc008yby.1 GeneTree:ENSGT00390000008853 InParanoid:Q9CR50
OMA:CGSYNTA EvolutionaryTrace:Q9CR50 NextBio:326416 Bgee:Q9CR50
Genevestigator:Q9CR50 GermOnline:ENSMUSG00000029397 Uniprot:Q9CR50
Length = 261
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 46/102 (45%), Positives = 61/102 (59%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH+ N D H + R +V +V C C Q
Sbjct: 19 GCEHYDRACLLKAPCCDKLYTCRLCHDT-----NED----HQLDRFKVKEVQCINCEKLQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
QQ C +C GEY+C C LFD D K+QYHC+ CGICR
Sbjct: 70 HAQQTCEDCSTLFGEYYCSICHLFDKD--KRQYHCESCGICR 109
>RGD|1359180 [details] [associations]
symbol:Rchy1 "ring finger and CHY zinc finger domain containing
1, E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0002039 "p53 binding" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005102
"receptor binding" evidence=IPI] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA;ISO]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0051865 "protein
autoubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184
InterPro:IPR004039 RGD:1359180 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0032436 GO:GO:0000151
GO:GO:0042787 GO:GO:0051865 Gene3D:2.20.28.10 EMBL:CH474060
eggNOG:NOG325406 InterPro:IPR017921 PROSITE:PS51270 CTD:25898
HOGENOM:HOG000231827 HOVERGEN:HBG062959 KO:K10144 OrthoDB:EOG4JWVDX
GeneTree:ENSGT00390000008853 OMA:CGSYNTA EMBL:BC083739
IPI:IPI00197118 RefSeq:NP_001007619.1 UniGene:Rn.2007 SMR:Q5XIE4
STRING:Q5XIE4 Ensembl:ENSRNOT00000003470 GeneID:289508
KEGG:rno:289508 UCSC:RGD:1359180 InParanoid:Q5XIE4 NextBio:629923
Genevestigator:Q5XIE4 Uniprot:Q5XIE4
Length = 261
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 46/102 (45%), Positives = 59/102 (57%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH D H + R +V +V C C Q
Sbjct: 19 GCEHYDRACLLKAPCCDKLYTCRLCH---------DTHEDHQLDRFKVKEVQCINCEKLQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
QQ C +C GEY+C C LFD D KKQYHC+ CGICR
Sbjct: 70 HAQQTCEDCSTLFGEYYCSICHLFDKD--KKQYHCESCGICR 109
>UNIPROTKB|D6RAF6 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] InterPro:IPR008913 Pfam:PF05495
PROSITE:PS51266 GO:GO:0008270 InterPro:IPR017921 PROSITE:PS51270
EMBL:AC096759 HGNC:HGNC:17479 ChiTaRS:RCHY1 IPI:IPI00964860
ProteinModelPortal:D6RAF6 SMR:D6RAF6 Ensembl:ENST00000504085
HOGENOM:HOG000130812 ArrayExpress:D6RAF6 Bgee:D6RAF6 Uniprot:D6RAF6
Length = 107
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 45/100 (45%), Positives = 59/100 (59%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC+HY R C ++APCC++++ CR CH+ N D H + R +V +V C C Q
Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQ 69
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGI 171
QQ C C GEY+C+ C LFD D KKQYHC+ CGI
Sbjct: 70 HAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGI 107
>CGD|CAL0003730 [details] [associations]
symbol:orf19.4658 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184
InterPro:IPR004039 CGD:CAL0003730 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACQ01000005
EMBL:AACQ01000006 Gene3D:2.20.28.10 eggNOG:NOG325406
InterPro:IPR017921 PROSITE:PS51270 RefSeq:XP_722729.1
RefSeq:XP_722875.1 ProteinModelPortal:Q5AMI8 GeneID:3635474
GeneID:3635699 KEGG:cal:CaO19.12128 KEGG:cal:CaO19.4658
Uniprot:Q5AMI8
Length = 796
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 42/104 (40%), Positives = 58/104 (55%)
Query: 71 YGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTE 130
+GC HY+ C+I P C + + CR CH+ Q L H + R+EV ++C C T
Sbjct: 421 FGCSHYQTNCKIECPTCFKWYTCRFCHDS--------QTLDHKLIRNEVKHILCMYCHTP 472
Query: 131 QKVQQ-VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
Q + C+NC + YFC C L+D+D +K YHCD CGICR
Sbjct: 473 QIPESNYCINCEQELANYFCSKCILYDNDQTKDIYHCDKCGICR 516
>UNIPROTKB|Q5AMI8 [details] [associations]
symbol:HYZ99 "Putative uncharacterized protein HYZ99"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184
InterPro:IPR004039 CGD:CAL0003730 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AACQ01000005
EMBL:AACQ01000006 Gene3D:2.20.28.10 eggNOG:NOG325406
InterPro:IPR017921 PROSITE:PS51270 RefSeq:XP_722729.1
RefSeq:XP_722875.1 ProteinModelPortal:Q5AMI8 GeneID:3635474
GeneID:3635699 KEGG:cal:CaO19.12128 KEGG:cal:CaO19.4658
Uniprot:Q5AMI8
Length = 796
Score = 241 (89.9 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 42/104 (40%), Positives = 58/104 (55%)
Query: 71 YGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTE 130
+GC HY+ C+I P C + + CR CH+ Q L H + R+EV ++C C T
Sbjct: 421 FGCSHYQTNCKIECPTCFKWYTCRFCHDS--------QTLDHKLIRNEVKHILCMYCHTP 472
Query: 131 QKVQQ-VCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
Q + C+NC + YFC C L+D+D +K YHCD CGICR
Sbjct: 473 QIPESNYCINCEQELANYFCSKCILYDNDQTKDIYHCDKCGICR 516
>TAIR|locus:2011266 [details] [associations]
symbol:AT1G18910 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 Pfam:PF01814 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR012312 Gene3D:2.20.28.10 InterPro:IPR017921
PROSITE:PS51270 IPI:IPI00536491 RefSeq:NP_173325.2 UniGene:At.15067
UniGene:At.50934 ProteinModelPortal:F4IDY5 SMR:F4IDY5
EnsemblPlants:AT1G18910.1 GeneID:838472 KEGG:ath:AT1G18910
OMA:DICKSIH Uniprot:F4IDY5
Length = 1254
Score = 240 (89.5 bits), Expect = 7.6e-19, P = 7.6e-19
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 71 YGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTE 130
+GC+HY+R C++ APCCN+++ C CH+E VD H + R ++ +++C C
Sbjct: 1018 FGCKHYKRSCKLLAPCCNKLYTCIRCHDE-----EVD----HLLDRKQITKMMCMKCMII 1068
Query: 131 QKVQQVCVN--CGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
Q V C N C MG+Y+C+ CKLFDDD ++ YHC C +CR
Sbjct: 1069 QPVGASCSNISCSSSMGKYYCKICKLFDDD--REIYHCPYCNLCR 1111
>TAIR|locus:2089678 [details] [associations]
symbol:BTS "BRUTUS" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0010106 "cellular response to iron ion
starvation" evidence=IEP] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 Pfam:PF01814 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0010106 InterPro:IPR012312 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 EMBL:AY094471 EMBL:BT005819
IPI:IPI00527325 RefSeq:NP_188457.1 UniGene:At.43728
UniGene:At.69146 ProteinModelPortal:Q8LPQ5 SMR:Q8LPQ5 STRING:Q8LPQ5
PRIDE:Q8LPQ5 EnsemblPlants:AT3G18290.1 GeneID:821357
KEGG:ath:AT3G18290 TAIR:At3g18290 HOGENOM:HOG000005958
InParanoid:Q8LPQ5 KO:K16276 OMA:HKAISKD PhylomeDB:Q8LPQ5
ProtClustDB:CLSN2684371 Genevestigator:Q8LPQ5 Uniprot:Q8LPQ5
Length = 1254
Score = 237 (88.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 50/140 (35%), Positives = 79/140 (56%)
Query: 43 LADREFLVTEESTNHNGSTEL-LRKGFME-----YGCQHYRRRCRIRAPCCNEIFDCRHC 96
+A ++ L E T NG EL F + YGC+HY+R C++RA CC+++F CR C
Sbjct: 970 IAAQQKLPKEAETAVNGDVELGCSPSFRDPEKQIYGCEHYKRNCKLRAACCDQLFTCRFC 1029
Query: 97 HNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCV--NC-GVCMGEYFCESCK 153
H++ ++ ++D+KL V +++C C Q V +C +C G M +++C CK
Sbjct: 1030 HDKVSDH-SMDRKL--------VTEMLCMRCLKVQPVGPICTTPSCDGFPMAKHYCSICK 1080
Query: 154 LFDDDTSKKQYHCDGCGICR 173
LFDD+ + YHC C +CR
Sbjct: 1081 LFDDE--RAVYHCPFCNLCR 1098
>TAIR|locus:2027176 [details] [associations]
symbol:AT1G74770 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006826 "iron ion transport" evidence=RCA]
[GO:0010043 "response to zinc ion" evidence=RCA] [GO:0010106
"cellular response to iron ion starvation" evidence=RCA]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039 Pfam:PF01814
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR012312 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 IPI:IPI00548578
RefSeq:NP_177615.2 UniGene:At.34843 ProteinModelPortal:F4HVS0
SMR:F4HVS0 PRIDE:F4HVS0 EnsemblPlants:AT1G74770.1 GeneID:843816
KEGG:ath:AT1G74770 OMA:GHLMHST ArrayExpress:F4HVS0 Uniprot:F4HVS0
Length = 1259
Score = 235 (87.8 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 40/105 (38%), Positives = 62/105 (59%)
Query: 71 YGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTE 130
+GC HY+R C++ APCC+++F C CH D++ H + R ++ +++C C
Sbjct: 1023 FGCNHYKRNCKLLAPCCDKLFTCIRCH---------DEEADHSVDRKQITKMMCMKCLLI 1073
Query: 131 QKVQQVCVN--CGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
Q + C N C MG+YFC+ CKL+DD+ +K YHC C +CR
Sbjct: 1074 QPIGANCSNTSCKSSMGKYFCKICKLYDDE--RKIYHCPYCNLCR 1116
>UNIPROTKB|E7ETW5 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001841 InterPro:IPR008913
Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270 EMBL:AC096759
HGNC:HGNC:17479 ChiTaRS:RCHY1 IPI:IPI00966948
ProteinModelPortal:E7ETW5 SMR:E7ETW5 Ensembl:ENST00000512706
UCSC:uc010iir.3 ArrayExpress:E7ETW5 Bgee:E7ETW5 Uniprot:E7ETW5
Length = 239
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 41/90 (45%), Positives = 52/90 (57%)
Query: 84 APCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGVC 143
APCC++++ CR CH+ N D H + R +V +V C C Q QQ C C
Sbjct: 9 APCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQHAQQTCEECSTL 59
Query: 144 MGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
GEY+C+ C LFD D KKQYHC+ CGICR
Sbjct: 60 FGEYYCDICHLFDKD--KKQYHCENCGICR 87
>UNIPROTKB|J9P7H1 [details] [associations]
symbol:RCHY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001878 InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184 SMART:SM00343
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017921 PROSITE:PS51270
GeneTree:ENSGT00390000008853 EMBL:AAEX03016672
Ensembl:ENSCAFT00000043608 Uniprot:J9P7H1
Length = 248
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 43/95 (45%), Positives = 53/95 (55%)
Query: 80 CRIR-APCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCV 138
C I APCC++++ CR CH+ N D H + R +V +V C C Q QQ C
Sbjct: 48 CSILLAPCCDKLYTCRLCHDN-----NED----HQLDRFKVKEVQCINCEKIQHAQQSCE 98
Query: 139 NCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
C GEY+C C LFD D KKQYHC+ CGICR
Sbjct: 99 ECSTLFGEYYCSICHLFDKD--KKQYHCENCGICR 131
>ASPGD|ASPL0000053938 [details] [associations]
symbol:AN10185 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR008913 Pfam:PF05495
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266 SMART:SM00184
InterPro:IPR004039 EMBL:BN001308 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 EnsemblFungi:CADANIAT00001219
HOGENOM:HOG000208913 OMA:CIERSTQ Uniprot:C8VRT7
Length = 522
Score = 224 (83.9 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 39/102 (38%), Positives = 57/102 (55%)
Query: 72 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
GC HY+R +++ C + + CR CH+E + H++ R + ++C LCG Q
Sbjct: 101 GCPHYQRNVKLQCFECKKWYTCRFCHDEVED---------HNLNRPKTENMLCMLCGHAQ 151
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
Q C CG +Y+C CKL+D+D SK YHC+ CGICR
Sbjct: 152 PAAQYCKWCGGLAAQYYCVECKLWDNDASKSIYHCNDCGICR 193
>UNIPROTKB|H0YAI4 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR008913
Pfam:PF05495 PROSITE:PS51266 GO:GO:0008270 InterPro:IPR017921
PROSITE:PS51270 EMBL:AC096759 HGNC:HGNC:17479 ChiTaRS:RCHY1
Ensembl:ENST00000513909 Bgee:H0YAI4 Uniprot:H0YAI4
Length = 111
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 45/114 (39%), Positives = 59/114 (51%)
Query: 72 GCQHYRRRCRIR--------------APCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRH 117
GC+HY R C ++ APCC++++ CR CH+ N D H + R
Sbjct: 9 GCEHYDRGCLLKVTPSMDSSLTSFRQAPCCDKLYTCRLCHDN-----NED----HQLDRF 59
Query: 118 EVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGI 171
+V +V C C Q QQ C C GEY+C+ C LFD D KKQYHC+ CGI
Sbjct: 60 KVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGI 111
>UNIPROTKB|E7EMC8 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001841 InterPro:IPR008913
PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039 GO:GO:0005634
GO:GO:0005737 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270 EMBL:AC096759
HGNC:HGNC:17479 ChiTaRS:RCHY1 IPI:IPI00965022
ProteinModelPortal:E7EMC8 SMR:E7EMC8 Ensembl:ENST00000507014
ArrayExpress:E7EMC8 Bgee:E7EMC8 Uniprot:E7EMC8
Length = 212
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
K QQ C C GEY+C+ C LFD D KKQYHC+ CGICR
Sbjct: 30 KAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICR 69
>UNIPROTKB|J3KPI0 [details] [associations]
symbol:RCHY1 "RING finger and CHY zinc finger
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51266
SMART:SM00184 InterPro:IPR004039 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 EMBL:AC096759 HGNC:HGNC:17479
ChiTaRS:RCHY1 ProteinModelPortal:J3KPI0 Ensembl:ENST00000380840
Uniprot:J3KPI0
Length = 221
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
K QQ C C GEY+C+ C LFD D KKQYHC+ CGICR
Sbjct: 30 KAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICR 69
>UNIPROTKB|F1RYV2 [details] [associations]
symbol:RCHY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR008913 Pfam:PF05495 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51266 SMART:SM00184 InterPro:IPR004039 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0032436
GO:GO:0000151 GO:GO:0042787 GO:GO:0051865 Gene3D:2.20.28.10
InterPro:IPR017921 PROSITE:PS51270 GeneTree:ENSGT00390000008853
OMA:CGSYNTA EMBL:CU929705 Ensembl:ENSSSCT00000009824 Uniprot:F1RYV2
Length = 232
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 84 APCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCG-V 142
APCC++++ CR CH+ N D H + R +V +V C C Q ++C+ G +
Sbjct: 1 APCCDKLYTCRLCHDS-----NED----HQLDRFKVKEVQCINCEKIQHANRLCIXSGHL 51
Query: 143 CMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
+ E+ C SC L + SK+Q HC CG+ R
Sbjct: 52 RVAEFCCSSCHL--RERSKQQGHCINCGLNR 80
>UNIPROTKB|F1P5N8 [details] [associations]
symbol:RCHY1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR004039 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398
GO:GO:0004842 GO:GO:0032436 GO:GO:0000151 GO:GO:0042787
GO:GO:0051865 Gene3D:2.20.28.10 InterPro:IPR017921 PROSITE:PS51270
GeneTree:ENSGT00390000008853 EMBL:AADN02016147 EMBL:AADN02016148
IPI:IPI00600077 Ensembl:ENSGALT00000038423 OMA:GWIVCND
Uniprot:F1P5N8
Length = 190
Score = 135 (52.6 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 24/42 (57%), Positives = 27/42 (64%)
Query: 132 KVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHCDGCGICR 173
+ QQ C C GE +C+ C LFD D KKQYHCD CGICR
Sbjct: 1 QAQQRCEGCSSLFGEKYCDVCHLFDRD--KKQYHCDECGICR 40
>CGD|CAL0003215 [details] [associations]
symbol:orf19.6555 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045041 "protein
import into mitochondrial intermembrane space" evidence=IEA]
InterPro:IPR008913 Pfam:PF05495 PROSITE:PS51266 CGD:CAL0003215
GO:GO:0008270 EMBL:AACQ01000016 InterPro:IPR016694
PIRSF:PIRSF017292 RefSeq:XP_721391.1 RefSeq:XP_888791.1
STRING:Q5AIG2 GeneID:3636980 GeneID:3704129 KEGG:cal:CaO19.6555
KEGG:cal:CaO19_6555 Uniprot:Q5AIG2
Length = 118
Score = 98 (39.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 28/88 (31%), Positives = 39/88 (44%)
Query: 73 CQHYRRRCRIRA---PCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGT 129
C HY + I A CCN + C CH E+ N+ D+ ++D + V+C C
Sbjct: 28 CTHYHTKLDIIAIKFKCCNNYYPCFKCHQESTNH-EPDRFDKND---NTTKAVLCGNCVN 83
Query: 130 EQKVQQVCVNCG-VCM--GEYFCESCKL 154
E V + +NCG C G F C L
Sbjct: 84 ELTVTEY-LNCGYTCTYCGGQFNPGCSL 110
>DICTYBASE|DDB_G0270180 [details] [associations]
symbol:DDB_G0270180 "Helper of Tim protein 13"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR008913 Pfam:PF05495
PROSITE:PS51266 dictyBase:DDB_G0270180 EMBL:AAFI02000005
GO:GO:0008270 eggNOG:NOG302514 OMA:CHREVSD RefSeq:XP_646602.1
EnsemblProtists:DDB0190863 GeneID:8617574 KEGG:ddi:DDB_G0270180
InParanoid:Q55C79 ProtClustDB:CLSZ2431445 Uniprot:Q55C79
Length = 118
Score = 89 (36.4 bits), Expect = 0.00057, P = 0.00057
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 73 CQHY-RRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQ 131
C+H + IRA CCN+ FDC CH E ++ ++ + + +V T +
Sbjct: 2 CKHILNTQVSIRAKCCNKWFDCADCHREVSDH-DIYKSDEMIFACKKCKKVFRKTISTFE 60
Query: 132 KVQQVCVNCGVCMGEYFCESCK 153
+ + C +C Y+ E+ K
Sbjct: 61 EADEYCPHCD---NHYYLEAVK 79
>ASPGD|ASPL0000051109 [details] [associations]
symbol:AN1900 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR008913 Pfam:PF05495 PROSITE:PS51266
EMBL:BN001307 GO:GO:0008270 EnsemblFungi:CADANIAT00008556
HOGENOM:HOG000183214 OMA:WANRMIC Uniprot:C8VKK1
Length = 698
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 28/83 (33%), Positives = 37/83 (44%)
Query: 62 ELLRKGFMEYGCQHYRRRCR-IRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVN 120
EL R+G C HY + R R CC ++F C CH+ A D P N
Sbjct: 583 ELPRRG----RCMHYSKSYRWFRFSCCQKVFPCDKCHDAAT-----------DHPNEHAN 627
Query: 121 QVICSLCGTEQKVQQVCVNCGVC 143
++IC C EQ + NCG+C
Sbjct: 628 RMICGFCSREQIYRPE--NCGIC 648
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.462 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 190 0.00091 110 3 11 22 0.37 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 607 (65 KB)
Total size of DFA: 197 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.88u 0.13s 20.01t Elapsed: 00:00:01
Total cpu time: 19.88u 0.13s 20.01t Elapsed: 00:00:01
Start: Sat May 11 06:39:10 2013 End: Sat May 11 06:39:11 2013