Query 029676
Match_columns 189
No_of_seqs 57 out of 59
Neff 3.6
Searched_HMMs 13730
Date Tue Mar 26 18:29:42 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/029676.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_2295-2299//hhsearch_scop/029676hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3buxb2 a.48.1.1 (B:48-177) N- 19.9 23 0.0017 13.6 3.8 44 86-130 70-114 (130)
2 d1b3ta_ d.58.8.1 (A:) Epstein 9.3 31 0.0023 12.9 -0.0 68 30-102 52-121 (147)
3 d1zkea1 a.30.6.1 (A:1-79) Hypo 6.4 40 0.0029 12.3 -0.5 16 141-156 28-43 (79)
4 d1n1ba1 a.102.4.1 (A:64-270) ( 4.5 89 0.0065 10.5 0.9 12 140-152 43-54 (207)
5 d2olra1 c.91.1.1 (A:228-540) P 4.3 27 0.0019 13.3 -2.6 19 115-133 222-240 (313)
6 d1ku0a_ c.69.1.18 (A:) Lipase 4.2 94 0.0069 10.3 0.5 8 27-34 317-324 (388)
7 d1xkga1 d.3.1.1 (A:4-305) Majo 4.1 92 0.0067 10.4 0.1 14 155-168 107-120 (302)
8 d1cs8a_ d.3.1.1 (A:) (Pro)cath 3.9 1E+02 0.0073 10.2 0.3 14 155-168 117-130 (316)
9 d1j3ba1 c.91.1.1 (A:212-529) P 3.6 34 0.0025 12.8 -2.5 20 38-64 16-35 (318)
10 d1t61c2 d.169.1.6 (C:115-225) 3.4 1.1E+02 0.0084 9.9 1.7 16 63-83 11-26 (111)
No 1
>d3buxb2 a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cbl) {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.90 E-value=23 Score=13.60 Aligned_cols=44 Identities=20% Similarity=0.135 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7678999999898423306-88763356644228999999999866
Q 029676 86 FLFSSLVAQGVKLAINLRN-SVVVDDEFKAHFNANLLRCLMIASAA 130 (189)
Q Consensus 86 FLfSSLvA~gLKl~i~l~~-~~~~~~~~~a~in~~~LR~gmL~sa~ 130 (189)
.-+.+|.++| ||++.|.+ +++......++..|..-++-.+-|-.
T Consensus 70 iyl~nL~~K~-kq~i~LFK~~kekmfde~S~~Rr~LtKLsLiFSHM 114 (130)
T d3buxb2 70 VFMENLMKKT-KQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM 114 (130)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHGGGGGSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999-99999988635766312208888768999999999
No 2
>d1b3ta_ d.58.8.1 (A:) Epstein barr virus nuclear antigen-1 (ebna1) {Epstein-Barr virus [TaxId: 10376]}
Probab=9.33 E-value=31 Score=12.93 Aligned_cols=68 Identities=21% Similarity=0.150 Sum_probs=38.2
Q ss_pred EECCHHHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 20304678887763244999--98887766655799888980000003577642136776789999998984233
Q 029676 30 VNVNSLFTVAVFVGLSLSPP--GPEHQSSRSHYQESKCVAGPEVSRMLTVYEVVSFSFFLFSSLVAQGVKLAINL 102 (189)
Q Consensus 30 VnVNSLFTiAVFiGLs~~~~--~~~~q~~~sl~~~~~C~a~~~ia~~Lv~FeV~SFsfFLfSSLvA~gLKl~i~l 102 (189)
.+-+|++.+---++|+...- .|--.-+-..+..|.=-||+-.+. -+.-|-.||-.++.|.++|.+|+=
T Consensus 52 gsKts~YnLRR~lal~ipe~RltpL~RLPyG~a~gpGPqPgPl~ES-----~~~yFlvFlqt~~fAe~~kDAi~D 121 (147)
T d1b3ta_ 52 GSKTSLYNLRRGTALAIPQCRLTPLSRLPFGMAPGPGPQPGPLRES-----IVCYFMVFLQTHIFAEVLKDAIKD 121 (147)
T ss_dssp SCHHHHHHHHHHHHHHCTTCEECCCEEEECCCCSSSSCCCCTTCEE-----EEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHH-----EEEEEEEEEEHHHHHHHHHHHHHH
T ss_conf 7876236566677630522021432346667689999989762010-----136664532045789999999999
No 3
>d1zkea1 a.30.6.1 (A:1-79) Hypothetical protein HP1531 {Helicobacter pylori [TaxId: 210]}
Probab=6.40 E-value=40 Score=12.33 Aligned_cols=16 Identities=31% Similarity=0.476 Sum_probs=12.9
Q ss_pred HHHHHHHHHHEEEEEC
Q ss_conf 9978875442112213
Q 029676 141 LSMVKVVEIQMGIFSC 156 (189)
Q Consensus 141 lsmvnvVQIkLG~LsC 156 (189)
+|++|+|.||-|...-
T Consensus 28 iS~vDyImIKRGS~Dm 43 (79)
T d1zkea1 28 LSLGDFIEIKRGSMDM 43 (79)
T ss_dssp CCHHHHHHHHTTSSCC
T ss_pred HHHHHHHEEECCCCCC
T ss_conf 2246761011376657
No 4
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=4.51 E-value=89 Score=10.48 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=4.8
Q ss_pred HHHHHHHHHHHEE
Q ss_conf 9997887544211
Q 029676 140 MLSMVKVVEIQMG 152 (189)
Q Consensus 140 mlsmvnvVQIkLG 152 (189)
.|.|||.+| |||
T Consensus 43 ~L~lID~lq-RLG 54 (207)
T d1n1ba1 43 QLELIHDLK-YLG 54 (207)
T ss_dssp HHHHHHHHH-HTT
T ss_pred HHHHHHHHH-HCC
T ss_conf 999999999-868
No 5
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=4.27 E-value=27 Score=13.29 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 4228999999999866677
Q 029676 115 HFNANLLRCLMIASAAGSV 133 (189)
Q Consensus 115 ~in~~~LR~gmL~sa~GSV 133 (189)
+|..+.-|-++-+-.-|++
T Consensus 222 Ri~l~~TR~ii~ai~~G~l 240 (313)
T d2olra1 222 RISIKDTRAIIDAILNGSL 240 (313)
T ss_dssp BCCHHHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHHCCC
T ss_conf 4777899999999985223
No 6
>d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=4.21 E-value=94 Score=10.35 Aligned_cols=8 Identities=75% Similarity=0.912 Sum_probs=0.0
Q ss_pred CCEEECCH
Q ss_conf 23120304
Q 029676 27 DGIVNVNS 34 (189)
Q Consensus 27 D~iVnVNS 34 (189)
||+||+.|
T Consensus 317 DGlV~v~S 324 (388)
T d1ku0a_ 317 DGIVNTIS 324 (388)
T ss_dssp SSSSBGGG
T ss_pred CCCCCHHH
T ss_conf 88658855
No 7
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]}
Probab=4.12 E-value=92 Score=10.41 Aligned_cols=14 Identities=29% Similarity=0.660 Sum_probs=0.0
Q ss_pred ECCCCCHHHHHHHH
Q ss_conf 13981000002100
Q 029676 155 SCGNEHVLQAVASM 168 (189)
Q Consensus 155 sCGs~~a~~avvpL 168 (189)
.||+-||++++..+
T Consensus 107 ~CGsCwAfa~~~~l 120 (302)
T d1xkga1 107 GCGSAWAFSGVAAT 120 (302)
T ss_dssp SSBCHHHHHHHHHH
T ss_pred CCCEEHHHHHHHHH
T ss_conf 56531042567769
No 8
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.88 E-value=1e+02 Score=10.19 Aligned_cols=14 Identities=21% Similarity=0.584 Sum_probs=0.0
Q ss_pred ECCCCCHHHHHHHH
Q ss_conf 13981000002100
Q 029676 155 SCGNEHVLQAVASM 168 (189)
Q Consensus 155 sCGs~~a~~avvpL 168 (189)
.||+-||++++..+
T Consensus 117 ~CGsCwAfa~~~~~ 130 (316)
T d1cs8a_ 117 QCGSCWAFSATGAL 130 (316)
T ss_dssp SSSCHHHHHHHHHH
T ss_pred CCCEEEEHHHHHHH
T ss_conf 77503100256778
No 9
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=3.60 E-value=34 Score=12.75 Aligned_cols=20 Identities=35% Similarity=0.431 Sum_probs=0.0
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 887763244999988877666557998
Q 029676 38 VAVFVGLSLSPPGPEHQSSRSHYQESK 64 (189)
Q Consensus 38 iAVFiGLs~~~~~~~~q~~~sl~~~~~ 64 (189)
+|+|.|||.|-- +||+.+|+
T Consensus 16 valffGLSGTGK-------TTLs~~~~ 35 (318)
T d1j3ba1 16 VAVFFGLSGTGK-------TTLSTDPE 35 (318)
T ss_dssp EEEEEECTTSCH-------HHHTCBTT
T ss_pred EEEEECCCCCCC-------CCCCCCCC
T ss_conf 899973687981-------42210798
No 10
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]}
Probab=3.36 E-value=1.1e+02 Score=9.88 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCEEEEEEEHH
Q ss_conf 988898000000357764213
Q 029676 63 SKCVAGPEVSRMLTVYEVVSF 83 (189)
Q Consensus 63 ~~C~a~~~ia~~Lv~FeV~SF 83 (189)
|+|.+|-. -+|+.|||
T Consensus 11 P~CP~g~~-----~LW~GYSf 26 (111)
T d1t61c2 11 PHCPAGWR-----SLWIGYSF 26 (111)
T ss_dssp CCCCTTEE-----EEEEEEEE
T ss_pred CCCCCCCH-----HHHCEECE
T ss_conf 97998750-----13230340
Done!