Query 029679
Match_columns 189
No_of_seqs 213 out of 2241
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 18:18:57 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/029679.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2300-2303//hhsearch_pdb/029679hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tui_C Methionine import ATP-b 1.0 1 1 139.0 10.6 105 73-182 20-135 (366)
2 3rlf_A Maltose/maltodextrin im 1.0 1 1 137.2 10.3 99 76-183 2-106 (381)
3 3fvq_A Fe(3+) IONS import ATP- 1.0 1 1 136.6 7.5 97 76-181 3-109 (359)
4 1v43_A Sugar-binding transport 1.0 1 1 131.7 7.4 96 75-179 9-110 (372)
5 2yyz_A Sugar ABC transporter, 1.0 1 1 131.2 8.2 95 76-179 2-102 (359)
6 1z47_A CYSA, putative ABC-tran 1.0 1 1 131.0 10.4 100 74-182 11-117 (355)
7 2it1_A 362AA long hypothetical 1.0 1 1 130.9 11.1 98 76-182 2-105 (362)
8 1g29_1 MALK, maltose transport 1.0 1 1 129.8 11.1 98 76-182 2-111 (372)
9 3d31_A Sulfate/molybdate ABC t 1.0 1 1 129.6 8.4 96 77-182 1-102 (348)
10 1oxx_K GLCV, glucose, ABC tran 1.0 1 1 129.5 7.8 99 76-181 2-111 (353)
No 1
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=1.00 E-value=1 Score=138.99 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=83.0
Q ss_pred CCCCEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCC----
Q ss_conf 8977499964389837544011021162168549949999869999576999999974132589950231699999----
Q 029679 73 REIPVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKP---- 148 (189)
Q Consensus 73 ~~~~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~~---- 148 (189)
...++|+++|+++.|+.....+.+|+++||++++|+++||+|+||||||||+|+|+|+++ |++|++...+...
T Consensus 20 ~~~~mi~v~~ls~~y~~~~~~~~aL~~vsl~i~~Gei~~IiGpnGaGKSTLlr~i~GL~~---p~~G~I~i~G~~i~~~~ 96 (366)
T 3tui_C 20 DDKHMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER---PTEGSVLVDGQELTTLS 96 (366)
T ss_dssp ---CCEEEEEEEEEEECSSSEEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSC---CSEEEEEETTEECSSCC
T ss_pred CCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCEEEEECCEECCCCC
T ss_conf 998659998489993898877378874699984898999995899559999999966999---99629999999987589
Q ss_pred -------CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf -------8748997067787778866846669999997499
Q 029679 149 -------PDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGG 182 (189)
Q Consensus 149 -------~~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g~ 182 (189)
++.+++++|+ +.+++. +++.+|+.+++...+.
T Consensus 97 ~~~~~~~r~~Ig~v~Q~-~~l~~~-~TV~env~~~~~~~~~ 135 (366)
T 3tui_C 97 ESELTKARRQIGMIFQH-FNLLSS-RTVFGNVALPLELDNT 135 (366)
T ss_dssp HHHHHHHHTTEEEECSS-CCCCTT-SCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHCCEEEEECC-CCCCCC-CCHHHHHHHHHHHCCC
T ss_conf 87999873868999278-756888-8999999999986599
No 2
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=1.00 E-value=1 Score=137.25 Aligned_cols=99 Identities=16% Similarity=0.246 Sum_probs=79.8
Q ss_pred CEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC------CC
Q ss_conf 749996438983754401102116216854994999986999957699999997413258995023169999------98
Q 029679 76 PVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK------PP 149 (189)
Q Consensus 76 ~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~------~~ 149 (189)
.+|+++|+++.|+.. .+|+++||++++|++++|+||||||||||+|+|+|+++ |++|++...+.. ..
T Consensus 2 ~~l~~~~l~~~yg~~----~~L~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~---p~~G~I~i~G~~~~~~~~~~ 74 (381)
T 3rlf_A 2 ASVQLQNVTKAWGEV----VVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLET---ITSGDLFIGEKRMNDTPPAE 74 (381)
T ss_dssp CCEEEEEEEEEETTE----EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSC---CSEEEEEETTEECTTCCGGG
T ss_pred CEEEEEEEEEEECCE----EEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCEEEEECCEECCCCCHHH
T ss_conf 789998489998999----99965689987998999996899559999999976998---89719999999998799778
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 7489970677877788668466699999974999
Q 029679 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGGE 183 (189)
Q Consensus 150 ~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g~~ 183 (189)
+..++++| ...+++. +++.+|+.+++...+.+
T Consensus 75 r~ig~VfQ-~~~l~p~-ltV~eni~~~~~~~~~~ 106 (381)
T 3rlf_A 75 RGVGMVFQ-SYALYPH-LSVAENMSFGLKLAGAK 106 (381)
T ss_dssp SCEEEECT-TCCCCTT-SCHHHHHTHHHHHTTCC
T ss_pred CCEEEEEC-CCCCCCC-CCHHHHHHHHHHHCCCC
T ss_conf 88899906-8757899-99999999999775999
No 3
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=1.00 E-value=1 Score=136.64 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=77.4
Q ss_pred CEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC--------
Q ss_conf 749996438983754401102116216854994999986999957699999997413258995023169999--------
Q 029679 76 PVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK-------- 147 (189)
Q Consensus 76 ~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~-------- 147 (189)
++|+++|+++.|+.. .+|+++||++++||+++|+||||||||||+|+|+|++. |++|++...+..
T Consensus 3 ~~l~i~~ls~~y~~~----~~L~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~---p~~G~I~i~G~~i~~~~~~~ 75 (359)
T 3fvq_A 3 AALHIGHLSKSFQNT----PVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQ---PDSGEISLSGKTIFSKNTNL 75 (359)
T ss_dssp CCEEEEEEEEEETTE----EEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSC---CSEEEEEETTEEEESSSCBC
T ss_pred CEEEEEEEEEEECCE----EEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCCEEEECCEECCCCCCCC
T ss_conf 689999699998998----88975389995998999999998059999999966998---99738999999975455665
Q ss_pred --CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf --9874899706778777886684666999999749
Q 029679 148 --PPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRG 181 (189)
Q Consensus 148 --~~~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g 181 (189)
.++..++++| ...+++. +++.+|+.+++...+
T Consensus 76 ~~~~r~ig~vfQ-~~~l~p~-ltV~eni~~~l~~~~ 109 (359)
T 3fvq_A 76 PVRERRLGYLVQ-EGVLFPH-LTVYRNIAYGLGNGK 109 (359)
T ss_dssp CGGGSCCEEECT-TCCCCTT-SCHHHHHHTTSTTSS
T ss_pred CHHHCCEEEEEC-CCCCCCC-CCHHHHHHHHHHHCC
T ss_conf 541088899907-8757899-999999999998769
No 4
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=1.00 E-value=1 Score=131.68 Aligned_cols=96 Identities=11% Similarity=0.163 Sum_probs=76.2
Q ss_pred CCEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC------C
Q ss_conf 7749996438983754401102116216854994999986999957699999997413258995023169999------9
Q 029679 75 IPVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK------P 148 (189)
Q Consensus 75 ~~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~------~ 148 (189)
+.+|+++++++.|+. . .+++++||++++|++++|+|+||||||||+|+|+|+++ |++|++...+.. .
T Consensus 9 M~~l~~~~l~~~y~~--~--~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~i~g~~i~~~~~~ 81 (372)
T 1v43_A 9 MVEVKLENLTKRFGN--F--TAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEE---PTEGRIYFGDRDVTYLPPK 81 (372)
T ss_dssp CCCEEEEEEEEEETT--E--EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSC---CSEEEEEETTEECTTSCGG
T ss_pred EEEEEEEEEEEEECC--E--EEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCEEEEECCEECCCCCHH
T ss_conf 016999989999899--7--88865489997998999999999869999999976998---8840999999999879865
Q ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 8748997067787778866846669999997
Q 029679 149 PDVATVLPMDGFHLYLSQLDAMEDPKEAHAR 179 (189)
Q Consensus 149 ~~v~~vi~~~~~~l~~~~ltv~enl~~~~~~ 179 (189)
.+..++++|+ ..++++ +++.+|+.+++..
T Consensus 82 ~r~ig~v~Q~-~~l~~~-ltv~eni~~~~~~ 110 (372)
T 1v43_A 82 DRNISMVFQS-YAVWPH-MTVYENIAFPLKI 110 (372)
T ss_dssp GGTEEEEEC-------C-CCHHHHHHTTCC-
T ss_pred HCCEEEEECC-CCCCCC-CCHHHHHHHHHHH
T ss_conf 6858999167-645799-8899999988876
No 5
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=131.17 Aligned_cols=95 Identities=16% Similarity=0.234 Sum_probs=75.8
Q ss_pred CEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC------CC
Q ss_conf 749996438983754401102116216854994999986999957699999997413258995023169999------98
Q 029679 76 PVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK------PP 149 (189)
Q Consensus 76 ~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~------~~ 149 (189)
.+|+++|+++.|+. . .+++++||++++|++++|+|+||||||||+|+|+|+++ |++|++...+.. .+
T Consensus 2 ~~l~~~~l~~~y~~--~--~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~i~g~~i~~~~~~~ 74 (359)
T 2yyz_A 2 PSIRVVNLKKYFGK--V--KAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYK---PTSGEIYFDDVLVNDIPPKY 74 (359)
T ss_dssp CCEEEEEEEEEETT--E--EEEEEEEEEECTTCEEEEECSTTSSHHHHHHHHHTSSC---CSEEEEEETTEECTTSCGGG
T ss_pred CEEEEEEEEEEECC--E--EEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCCEEEECCEECCCCCHHH
T ss_conf 58999979999899--8--88965589986998999996898239999999977998---89629999999998798645
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 748997067787778866846669999997
Q 029679 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHAR 179 (189)
Q Consensus 150 ~v~~vi~~~~~~l~~~~ltv~enl~~~~~~ 179 (189)
+..++++| ...++++ +++.+|+.++++.
T Consensus 75 r~ig~v~Q-~~~l~~~-ltv~eni~~~~~~ 102 (359)
T 2yyz_A 75 REVGMVFQ-NYALYPH-MTVFENIAFPLRA 102 (359)
T ss_dssp TTEEEECS-SCCCCTT-SCHHHHHHGGGSS
T ss_pred CCEEEEEC-CCCCCCC-CCHHHHHHHHHHH
T ss_conf 84899906-8645799-8899999999976
No 6
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=1.00 E-value=1 Score=130.96 Aligned_cols=100 Identities=14% Similarity=0.257 Sum_probs=79.3
Q ss_pred CCCEEEEEEEEEEC-CCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC-----
Q ss_conf 97749996438983-754401102116216854994999986999957699999997413258995023169999-----
Q 029679 74 EIPVVEARCMDEVY-DALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK----- 147 (189)
Q Consensus 74 ~~~~i~~~~l~~~y-~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~----- 147 (189)
+.++|+++|+++.| +.. .+++++||++++|++++|+|+||||||||+|+|+|+++ |++|.+...+..
T Consensus 11 ~~~~l~~~~l~~~y~g~~----~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~i~g~~i~~~~ 83 (355)
T 1z47_A 11 GSMTIEFVGVEKIYPGGA----RSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLER---PTKGDVWIGGKRVTDLP 83 (355)
T ss_dssp CCEEEEEEEEEECCTTST----TCEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSC---CSEEEEEETTEECTTCC
T ss_pred CCCEEEEEEEEEEECCCC----EEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC---CCCCEEEECCEECCCCC
T ss_conf 986699997999975997----89963489997997999998999709999999967998---89619999999998687
Q ss_pred -CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf -98748997067787778866846669999997499
Q 029679 148 -PPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGG 182 (189)
Q Consensus 148 -~~~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g~ 182 (189)
.++..++++|+ ..+++. +++.+|+.+++...+.
T Consensus 84 ~~~r~ig~v~Q~-~~l~~~-ltv~eni~~~l~~~~~ 117 (355)
T 1z47_A 84 PQKRNVGLVFQN-YALFQH-MTVYDNVSFGLREKRV 117 (355)
T ss_dssp GGGSSEEEECGG-GCCCTT-SCHHHHHHHHHHHTTC
T ss_pred HHHCCEEEEECC-CCCCCC-CCHHHHHHHHHHHCCC
T ss_conf 645748999268-635789-8899999999977499
No 7
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=1.00 E-value=1 Score=130.86 Aligned_cols=98 Identities=13% Similarity=0.209 Sum_probs=77.7
Q ss_pred CEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC------CC
Q ss_conf 749996438983754401102116216854994999986999957699999997413258995023169999------98
Q 029679 76 PVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVK------PP 149 (189)
Q Consensus 76 ~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~------~~ 149 (189)
.+|+++|+++.|+.. .+++++||++++|++++|+|+||||||||+|+|+|+++ |++|.+...+.. ..
T Consensus 2 ~~l~~~~l~~~y~~~----~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~i~g~~i~~~~~~~ 74 (362)
T 2it1_A 2 VEIKLENIVKKFGNF----TALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYK---PTSGKIYFDEKDVTELPPKD 74 (362)
T ss_dssp CCEEEEEEEEESSSS----EEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSC---CSEEEEEETTEECTTSCGGG
T ss_pred CEEEEEEEEEEECCE----EEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCEEEEECCEECCCCCHHH
T ss_conf 679999699998997----88975589997998999999999359999999966998---88509999999998699757
Q ss_pred CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 748997067787778866846669999997499
Q 029679 150 DVATVLPMDGFHLYLSQLDAMEDPKEAHARRGG 182 (189)
Q Consensus 150 ~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g~ 182 (189)
+..++++| ...++++ +++.+|+.+++...+.
T Consensus 75 r~ig~v~Q-~~~l~~~-ltv~eni~~~~~~~~~ 105 (362)
T 2it1_A 75 RNVGLVFQ-NWALYPH-MTVYKNIAFPLELRKA 105 (362)
T ss_dssp TTEEEECT-TCCCCTT-SCHHHHHHHHHHHTTC
T ss_pred CCEEEEEC-CCCCCCC-CCHHHHHHHHHHHCCC
T ss_conf 84899946-7645789-8799999999876489
No 8
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=1.00 E-value=1 Score=129.85 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=77.9
Q ss_pred CEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCC---------
Q ss_conf 74999643898375440110211621685499499998699995769999999741325899502316999---------
Q 029679 76 PVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQV--------- 146 (189)
Q Consensus 76 ~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~--------- 146 (189)
.+|+++|+++.|+. . .+++++||++++|++++|+|+||||||||+|+|+|+++ |++|++...+.
T Consensus 2 ~~l~~~~l~~~y~~--~--~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~i~g~~~~~~~~~~ 74 (372)
T 1g29_1 2 AGVRLVDVWKVFGE--V--TAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEE---PSRGQIYIGDKLVADPEKGI 74 (372)
T ss_dssp EEEEEEEEEEEETT--E--EEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSC---CSEEEEEETTEEEEEGGGTE
T ss_pred CEEEEEEEEEEECC--E--EEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCCEEEECCEECCCCCCCC
T ss_conf 78999969999899--8--88831389996998999999999379999999976998---99638999999986544434
Q ss_pred --C-CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf --9-98748997067787778866846669999997499
Q 029679 147 --K-PPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRGG 182 (189)
Q Consensus 147 --~-~~~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g~ 182 (189)
. .++..++++| ...++++ +++.+|+.+++...+.
T Consensus 75 ~~~~~~r~ig~v~Q-~~~l~~~-ltv~eni~~~~~~~~~ 111 (372)
T 1g29_1 75 FVPPKDRDIAMVFQ-SYALYPH-MTVYDNIAFPLKLRKV 111 (372)
T ss_dssp ECCGGGSSEEEECS-CCCCCTT-SCHHHHHHHHHHHTTC
T ss_pred CCCHHHCCEEEEEC-CCCCCCC-CCHHHHHHHHHHHCCC
T ss_conf 58876798899927-8756899-8899999999977599
No 9
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=1.00 E-value=1 Score=129.63 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=76.5
Q ss_pred EEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCC------CC
Q ss_conf 499964389837544011021162168549949999869999576999999974132589950231699999------87
Q 029679 77 VVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQVKP------PD 150 (189)
Q Consensus 77 ~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~~~------~~ 150 (189)
||+++|+++.|+. . +++++||++++|++++|+|+||||||||+|+|+|+++ |++|++...+... ++
T Consensus 1 ml~~~~l~~~y~~--~---~l~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~~~g~~i~~~~~~~r 72 (348)
T 3d31_A 1 MIEIESLSRKWKN--F---SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHV---PDSGRILLDGKDVTDLSPEKH 72 (348)
T ss_dssp CEEEEEEEEECSS--C---EEEEEEEEECTTCEEEEECCCTHHHHHHHHHHHTSSC---CSEEEEEETTEECTTSCHHHH
T ss_pred CEEEEEEEEEECC--E---EEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC---CCCCEEEECCEECCCCCHHHC
T ss_conf 9899989999799--7---9834579986998999999998109999999976998---998589999999987866438
Q ss_pred EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 48997067787778866846669999997499
Q 029679 151 VATVLPMDGFHLYLSQLDAMEDPKEAHARRGG 182 (189)
Q Consensus 151 v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g~ 182 (189)
..++++| ...++++ +++.+|+.+++...+.
T Consensus 73 ~ig~v~Q-~~~l~~~-ltv~enl~~~~~~~~~ 102 (348)
T 3d31_A 73 DIAFVYQ-NYSLFPH-MNVKKNLEFGMRMKKI 102 (348)
T ss_dssp TCEEECT-TCCCCTT-SCHHHHHHHHHHHHCC
T ss_pred CEEEEEC-CCCCCCC-CCHHHHHHHHHHHCCC
T ss_conf 6899926-7645799-8999999999977699
No 10
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=1.00 E-value=1 Score=129.49 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=76.6
Q ss_pred CEEEEEEEEEECCCCCEEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCC---------
Q ss_conf 74999643898375440110211621685499499998699995769999999741325899502316999---------
Q 029679 76 PVVEARCMDEVYDALAQRLLPTSALASNVNVKHIVGLAGPPGAGKSTLAAEVVRRINKIWPQKASSFDSQV--------- 146 (189)
Q Consensus 76 ~~i~~~~l~~~y~~~~~~~~~l~~vsl~i~~g~~~~ivG~sGsGKSTL~~~i~gl~~~~~p~~g~i~~~~~--------- 146 (189)
.+|+++|+++.|+.. ...+++++||++++|++++|+|+||||||||+|+|+|+++ |++|++...+.
T Consensus 2 ~~l~i~~l~~~y~~~--~~~vl~~vsl~i~~Ge~~~llGpnGsGKSTLLr~iaGl~~---p~~G~I~i~g~~i~~~~~~~ 76 (353)
T 1oxx_K 2 VRIIVKNVSKVFKKG--KVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDV---PSTGELYFDDRLVASNGKLI 76 (353)
T ss_dssp CCEEEEEEEEEEGGG--TEEEEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHTSSC---CSEEEEEETTEEEEETTEES
T ss_pred CEEEEEEEEEEECCE--EEEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC---CCCEEEEECCEECCCCCCCC
T ss_conf 689998699998998--2014813489997998999997999709999999967998---88409999999986555456
Q ss_pred -C-CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf -9-9874899706778777886684666999999749
Q 029679 147 -K-PPDVATVLPMDGFHLYLSQLDAMEDPKEAHARRG 181 (189)
Q Consensus 147 -~-~~~v~~vi~~~~~~l~~~~ltv~enl~~~~~~~g 181 (189)
. .++..++++|+ ..++++ +++.+|+.+++...+
T Consensus 77 ~~~~~r~ig~v~Q~-~~l~~~-ltv~eni~~~~~~~~ 111 (353)
T 1oxx_K 77 VPPEDRKIGMVFQT-WALYPN-LTAFENIAFPLTNMK 111 (353)
T ss_dssp SCGGGSCEEEEETT-SCCCTT-SCHHHHHHGGGTTSS
T ss_pred CCHHHCCEEEEECC-CCCCCC-CCHHHHHHHHHHHCC
T ss_conf 87643978999478-746799-899999999998759
Done!