Query 029686
Match_columns 189
No_of_seqs 193 out of 1486
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 18:36:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/029686.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2304-2308//hhsearch_pdb/029686hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u79_A FKBP-type peptidyl-prol 1.0 1 1 144.5 10.7 102 79-180 2-104 (129)
2 2lkn_A AH receptor-interacting 1.0 1 1 144.3 5.5 86 86-177 7-97 (165)
3 3uf8_A Ubiquitin-like protein 1.0 1 1 144.1 11.4 98 81-184 96-194 (209)
4 1fd9_A Protein (macrophage inf 1.0 1 1 143.7 9.8 97 80-184 97-194 (213)
5 1jvw_A Macrophage infectivity 1.0 1 1 143.6 8.4 97 80-184 28-126 (167)
6 3oe2_A Peptidyl-prolyl CIS-tra 1.0 1 1 143.4 10.5 101 73-184 101-202 (219)
7 3jxv_A 70 kDa peptidyl-prolyl 1.0 1 1 139.2 0.0 89 86-180 241-332 (356)
8 1q6h_A FKBP-type peptidyl-prol 1.0 1 1 138.6 10.5 93 81-181 113-206 (224)
9 1kt0_A FKBP51, 51 kDa FK506-bi 1.0 1 1 138.1 7.2 93 86-184 28-122 (457)
10 2y78_A Peptidyl-prolyl CIS-tra 1.0 1 1 136.6 12.3 97 81-183 20-117 (133)
No 1
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=1.00 E-value=1 Score=144.49 Aligned_cols=102 Identities=50% Similarity=0.894 Sum_probs=95.5
Q ss_pred CCCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCC
Q ss_conf 99998166699738999855988878999979999999962991896455688268999489871688999772999999
Q 029686 79 DPPCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVP 158 (189)
Q Consensus 79 ~~~~~~~~~~sG~~y~~~~~G~G~~~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~ 158 (189)
+..+.++++++|++|+++++|+|..++.||.|.+||++++.||++|++++++++|+.|.+|.+++++||+++|.|+++|+
T Consensus 2 ~~~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~ 81 (129)
T 1u79_A 2 TTSCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIP 81 (129)
T ss_dssp ---CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBC
T ss_pred CCCCCCEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHCCCCCCC
T ss_conf 97786089999739999883889879999999999999989999998368888888999699884278999751555656
Q ss_pred CCCCCCE-EEEECCCCCCCCCCC
Q ss_conf 8557955-999669998998899
Q 029686 159 PMHVGTW-KTQTPDSTRVSIRAR 180 (189)
Q Consensus 159 lmk~Ge~-~v~iP~~layG~~g~ 180 (189)
+|++|++ ++.+|++++||+++.
T Consensus 82 ~m~~Ge~~~v~ip~~~aYG~~~~ 104 (129)
T 1u79_A 82 PMLTGGKRTLRIPPELAYGDRGA 104 (129)
T ss_dssp CCBTTCEEEEEECGGGTTGGGCE
T ss_pred CCCCCCEEEEEECHHHCCCCCCC
T ss_conf 65999999999996996398887
No 2
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=144.33 Aligned_cols=86 Identities=21% Similarity=0.267 Sum_probs=80.6
Q ss_pred ECCCCCEEEEEECCCCCCC--CCCCEEEEEEEEEECC--CCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf 6699738999855988878--9999799999999629--91896455688268999489871688999772999999855
Q 029686 86 FARSGLGYCDIASGSGVEA--PYGELINVHYTARFAD--GIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMH 161 (189)
Q Consensus 86 ~~~sG~~y~~~~~G~G~~~--~~gd~V~v~y~~~~~~--G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~lmk 161 (189)
.+.+|++|+++++|+|..| ++||.|.|||++++.| |++||||+++++|+.|.+|.+++|+||+++|.+ |+
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~------M~ 80 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCT------MR 80 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTT------CC
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHC------CC
T ss_conf 167982999987786899889999999999999980899648876121798779995589724799999852------86
Q ss_pred CCCE-EEEECCCCCCCC
Q ss_conf 7955-999669998998
Q 029686 162 VGTW-KTQTPDSTRVSI 177 (189)
Q Consensus 162 ~Ge~-~v~iP~~layG~ 177 (189)
+|++ +|+|||+++||+
T Consensus 81 ~Ge~~~~~ipp~laYG~ 97 (165)
T 2lkn_A 81 EGEIAQFLCDIKHVVLY 97 (165)
T ss_dssp TTCEEEEECCHHHHSSH
T ss_pred CCCEEEEEECHHHHCCC
T ss_conf 47469999998994687
No 3
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=1.00 E-value=1 Score=144.08 Aligned_cols=98 Identities=38% Similarity=0.597 Sum_probs=91.6
Q ss_pred CCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 99816669973899985598887899997999999996299189645568826899948987168899977299999985
Q 029686 81 PCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (189)
Q Consensus 81 ~~~~~~~~sG~~y~~~~~G~G~~~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~lm 160 (189)
...+.++++|++|+++++|+|..|+.||.|.+||++++.||++|+++++++.|+.|.+|.+++++||+++|.+ |
T Consensus 96 g~t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~g------M 169 (209)
T 3uf8_A 96 GSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG------M 169 (209)
T ss_dssp CCCCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTT------C
T ss_pred CCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHC------C
T ss_conf 4422288893599999768887689999999999999899989987156687789996898535369999708------8
Q ss_pred CCCCE-EEEECCCCCCCCCCCCCCE
Q ss_conf 57955-9996699989988999960
Q 029686 161 HVGTW-KTQTPDSTRVSIRARTCRM 184 (189)
Q Consensus 161 k~Ge~-~v~iP~~layG~~g~~~~i 184 (189)
++|++ ++++||++|||++|.+..|
T Consensus 170 ~~Ge~~~v~Ipp~~aYG~~g~~~~I 194 (209)
T 3uf8_A 170 KVGGVRRLTIPPQLGYGARGAAGVI 194 (209)
T ss_dssp BTTCEEEEEECGGGTTTTTCBTTTB
T ss_pred CCCCEEEEEECCHHHCCCCCCCCCC
T ss_conf 9987899998937857877877775
No 4
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=1.00 E-value=1 Score=143.72 Aligned_cols=97 Identities=29% Similarity=0.436 Sum_probs=89.1
Q ss_pred CCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC
Q ss_conf 99981666997389998559888789999799999999629918964556882689994898716889997729999998
Q 029686 80 PPCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPP 159 (189)
Q Consensus 80 ~~~~~~~~~sG~~y~~~~~G~G~~~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~l 159 (189)
....+.++++|++|+++++|+|..|+.||.|.+||++++.||++|++++.++.|+.|.+ +++|+||+++|.+
T Consensus 97 ~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~g------ 168 (213)
T 1fd9_A 97 NKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQL------ 168 (213)
T ss_dssp HSTTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTT------
T ss_pred CCCCCEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEC--CCHHHHHHHHHCC------
T ss_conf 03792788995099998667886688999999999999789989861466689779986--8655679999748------
Q ss_pred CCCCCE-EEEECCCCCCCCCCCCCCE
Q ss_conf 557955-9996699989988999960
Q 029686 160 MHVGTW-KTQTPDSTRVSIRARTCRM 184 (189)
Q Consensus 160 mk~Ge~-~v~iP~~layG~~g~~~~i 184 (189)
|++|++ +|+||++++||.++.+..|
T Consensus 169 Mk~Gek~~v~IP~~laYG~~g~~~~I 194 (213)
T 1fd9_A 169 MPAGSTWEIYVPSGLAYGPRSVGGPI 194 (213)
T ss_dssp CCTTCEEEEEECGGGTTTTCCCSSSC
T ss_pred CCCCCEEEEEECCHHCCCCCCCCCCC
T ss_conf 99998899998954316766778887
No 5
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=1.00 E-value=1 Score=143.57 Aligned_cols=97 Identities=31% Similarity=0.433 Sum_probs=88.8
Q ss_pred CCCCEEECCCCCEEEEEECCCCCC-CCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCC
Q ss_conf 999816669973899985598887-8999979999999962991896455688268999489871688999772999999
Q 029686 80 PPCEFSFARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVP 158 (189)
Q Consensus 80 ~~~~~~~~~sG~~y~~~~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~ 158 (189)
....+.++++|++|+++++|+|.. |+.||.|.+||++++.||++|++++.++.|+.|.+ +++|+||+++|.+
T Consensus 28 ~~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~g----- 100 (167)
T 1jvw_A 28 AQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQL----- 100 (167)
T ss_dssp HSTTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTT-----
T ss_pred CCCCCEECCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEE--CCHHHHHHHHHCC-----
T ss_conf 479918999977999997677876899999999999999899999960565688789993--8666879999738-----
Q ss_pred CCCCCCE-EEEECCCCCCCCCCCCCCE
Q ss_conf 8557955-9996699989988999960
Q 029686 159 PMHVGTW-KTQTPDSTRVSIRARTCRM 184 (189)
Q Consensus 159 lmk~Ge~-~v~iP~~layG~~g~~~~i 184 (189)
|++|++ +|+||++++||.++.++.|
T Consensus 101 -Mk~Ge~~~~~Ip~~laYG~~g~~~~I 126 (167)
T 1jvw_A 101 -MREGDRWRLFIPYDLAYGVTGGGGMI 126 (167)
T ss_dssp -CCTTCEEEEEECGGGTTTTTCSSSSS
T ss_pred -CCCCCEEEEEECCHHHCCCCCCCCCC
T ss_conf -89998899998955617877878875
No 6
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=1.00 E-value=1 Score=143.38 Aligned_cols=101 Identities=20% Similarity=0.339 Sum_probs=89.5
Q ss_pred HHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHC
Q ss_conf 65312999998166699738999855988878999979999999962991896455688268999489871688999772
Q 029686 73 YYATTADPPCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGIL 152 (189)
Q Consensus 73 ~~~~~~~~~~~~~~~~sG~~y~~~~~G~G~~~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~ 152 (189)
.+...+.....+.++++|++|+++++|+|..|..||.|.+||++++.||++|+++ +.|+.|.+| ++|+||+++|.
T Consensus 101 ~fl~~n~~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~ 175 (219)
T 3oe2_A 101 TFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQ 175 (219)
T ss_dssp HHHHHHHTSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHT
T ss_pred HHHHHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECC---CCCEEEEEC--CHHHHHHHHHH
T ss_conf 9999715479938999971999996678856778988999999997799785246---995799814--42078999981
Q ss_pred CCCCCCCCCCCCE-EEEECCCCCCCCCCCCCCE
Q ss_conf 9999998557955-9996699989988999960
Q 029686 153 GGDGVPPMHVGTW-KTQTPDSTRVSIRARTCRM 184 (189)
Q Consensus 153 g~~~l~lmk~Ge~-~v~iP~~layG~~g~~~~i 184 (189)
+ |++|++ +++|||+++||.+|.+..|
T Consensus 176 g------Mk~Gek~~v~IPp~lAYG~~g~~~~I 202 (219)
T 3oe2_A 176 N------MPTGAKWRLVIPSDQAYGAEGAGDLI 202 (219)
T ss_dssp T------CCTTCEEEEEECGGGTTTTTCBTTTB
T ss_pred C------CCCCCEEEEEECCHHCCCCCCCCCCC
T ss_conf 8------99987799998915607988888888
No 7
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=1.00 E-value=1 Score=139.16 Aligned_cols=89 Identities=19% Similarity=0.289 Sum_probs=81.9
Q ss_pred ECCCCCEEEEEECCCC-CCCCCCCEEEEEEEEEECCCCEEECC-CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 6699738999855988-87899997999999996299189645-568826899948987168899977299999985579
Q 029686 86 FARSGLGYCDIASGSG-VEAPYGELINVHYTARFADGIIFDSS-YKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVG 163 (189)
Q Consensus 86 ~~~sG~~y~~~~~G~G-~~~~~gd~V~v~y~~~~~~G~~~~ss-~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~lmk~G 163 (189)
..+.+++|+++++|.| ..|+.||.|++||++++.||++|+++ +.+++|+.|.+|.+++|+||+++|.+ |++|
T Consensus 241 ~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~g------m~~G 314 (356)
T 3jxv_A 241 GDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLN------MKKG 314 (356)
T ss_dssp STTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTT------CCBT
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHC------CCCC
T ss_conf 3565226776303544577998899999999998999789645666886779997997613479998727------8989
Q ss_pred CE-EEEECCCCCCCCCCC
Q ss_conf 55-999669998998899
Q 029686 164 TW-KTQTPDSTRVSIRAR 180 (189)
Q Consensus 164 e~-~v~iP~~layG~~g~ 180 (189)
|+ ++.+||+++||.++.
T Consensus 315 e~~~v~ip~~~aYG~~~~ 332 (356)
T 3jxv_A 315 EVALVTIPPEYAYGSTES 332 (356)
T ss_dssp CEEEEEECGGGTTTTSCE
T ss_pred CEEEEEECHHHCCCCCCC
T ss_conf 779999996990288886
No 8
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=1.00 E-value=1 Score=138.55 Aligned_cols=93 Identities=26% Similarity=0.421 Sum_probs=86.9
Q ss_pred CCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 99816669973899985598887899997999999996299189645568826899948987168899977299999985
Q 029686 81 PCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (189)
Q Consensus 81 ~~~~~~~~sG~~y~~~~~G~G~~~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~lm 160 (189)
...+.++++|++|.++++|+|..|+.||.|.+||++++.||++|++++.++.|+.|.+ +++|+||+++|.+ |
T Consensus 113 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~g------M 184 (224)
T 1q6h_A 113 EKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKN------I 184 (224)
T ss_dssp STTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGG------S
T ss_pred CCCEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCEEEEC--CCCCHHHHHHHCC------C
T ss_conf 8995988995499999666676555898999999999689989862255688879984--8722639999718------8
Q ss_pred CCCCE-EEEECCCCCCCCCCCC
Q ss_conf 57955-9996699989988999
Q 029686 161 HVGTW-KTQTPDSTRVSIRART 181 (189)
Q Consensus 161 k~Ge~-~v~iP~~layG~~g~~ 181 (189)
++|++ +|+||++++||.++.+
T Consensus 185 k~Gek~~v~IP~~laYG~~g~~ 206 (224)
T 1q6h_A 185 KKGGKIKLVIPPELAYGKAGVP 206 (224)
T ss_dssp CTTCEEEEEECGGGTTTTTCBT
T ss_pred CCCCEEEEEECCHHHCCCCCCC
T ss_conf 9998899998953305867888
No 9
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=1.00 E-value=1 Score=138.11 Aligned_cols=93 Identities=26% Similarity=0.381 Sum_probs=86.8
Q ss_pred ECCCCCEEEEEECCCCCC-CCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 669973899985598887-8999979999999962991896455688268999489871688999772999999855795
Q 029686 86 FARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGT 164 (189)
Q Consensus 86 ~~~sG~~y~~~~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~lmk~Ge 164 (189)
.+++|++|+++++|+|.. |+.||.|.|||++++.||++|++++.++.|+.|.+|.+.+|+||+++|.+ |++|+
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~------m~~Ge 101 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT------MKRGE 101 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTT------CCTTC
T ss_pred CCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHHH------CCCCC
T ss_conf 799808999997778887899999999999999799989960278898769991884253399999962------77897
Q ss_pred E-EEEECCCCCCCCCCCCCCE
Q ss_conf 5-9996699989988999960
Q 029686 165 W-KTQTPDSTRVSIRARTCRM 184 (189)
Q Consensus 165 ~-~v~iP~~layG~~g~~~~i 184 (189)
+ .|.|||+++||..|.+..|
T Consensus 102 ~~~~~i~~~~~yg~~g~~~~i 122 (457)
T 1kt0_A 102 ICHLLCKPEYAYGSAGSLPKI 122 (457)
T ss_dssp EEEEEECGGGTTTTTCBTTTB
T ss_pred EEEEEECHHHHCCCCCCCCCC
T ss_conf 799998769913666788889
No 10
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=1.00 E-value=1 Score=136.58 Aligned_cols=97 Identities=38% Similarity=0.587 Sum_probs=90.1
Q ss_pred CCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 99816669973899985598887899997999999996299189645568826899948987168899977299999985
Q 029686 81 PCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (189)
Q Consensus 81 ~~~~~~~~sG~~y~~~~~G~G~~~~~gd~V~v~y~~~~~~G~~~~ss~~~g~p~~~~iG~~~~i~Gl~~~l~g~~~l~lm 160 (189)
...+.++++|++|+++++|+|..++.||.|.+||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |
T Consensus 20 ~~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~g------m 93 (133)
T 2y78_A 20 HMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG------M 93 (133)
T ss_dssp TTCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTT------C
T ss_pred CCCCEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCEEEEECCCCHHHHHHHHHCC------C
T ss_conf 8982789997799999768898799999999999999799999862576789889994897830899999718------8
Q ss_pred CCCCE-EEEECCCCCCCCCCCCCC
Q ss_conf 57955-999669998998899996
Q 029686 161 HVGTW-KTQTPDSTRVSIRARTCR 183 (189)
Q Consensus 161 k~Ge~-~v~iP~~layG~~g~~~~ 183 (189)
++||+ ++.+|++++||+++....
T Consensus 94 k~Ge~~~v~ip~~~aYG~~~~~~~ 117 (133)
T 2y78_A 94 KVGGVRRLTIPPQLGYGARGAGGV 117 (133)
T ss_dssp BTTCEEEEEECGGGTTTTTCBTTT
T ss_pred CCCCEEEEEECCHHHCCCCCCCCC
T ss_conf 999899999894784798887888
Done!