Query 029687
Match_columns 189
No_of_seqs 222 out of 1703
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 16:54:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14116 gpmA phosphoglyceromu 100.0 7.7E-29 1.7E-33 203.7 12.1 107 81-188 1-113 (228)
2 PRK13463 phosphatase PhoE; Pro 100.0 9.6E-29 2.1E-33 199.5 12.2 108 81-189 2-109 (203)
3 PRK15004 alpha-ribazole phosph 100.0 2E-28 4.4E-33 196.7 12.3 106 82-188 1-106 (199)
4 PRK14119 gpmA phosphoglyceromu 100.0 2.2E-28 4.8E-33 200.8 12.4 107 81-188 1-113 (228)
5 PRK14117 gpmA phosphoglyceromu 100.0 8.4E-28 1.8E-32 197.8 12.2 107 81-188 1-113 (230)
6 PRK14118 gpmA phosphoglyceromu 99.9 1.6E-27 3.5E-32 195.7 12.4 106 82-188 1-112 (227)
7 PRK01295 phosphoglyceromutase; 99.9 3.2E-27 7E-32 191.3 12.7 105 81-186 2-111 (206)
8 PRK01112 phosphoglyceromutase; 99.9 5.9E-27 1.3E-31 192.7 12.3 106 81-187 1-135 (228)
9 PRK14120 gpmA phosphoglyceromu 99.9 8.4E-27 1.8E-31 194.1 12.8 109 79-188 2-116 (249)
10 TIGR03848 MSMEG_4193 probable 99.9 7.5E-27 1.6E-31 188.2 11.3 98 83-180 1-98 (204)
11 COG0406 phoE Broad specificity 99.9 1.3E-26 2.9E-31 186.7 12.3 107 81-188 2-110 (208)
12 TIGR03162 ribazole_cobC alpha- 99.9 1.4E-26 3.1E-31 181.9 11.2 102 84-188 1-102 (177)
13 PRK03482 phosphoglycerate muta 99.9 2.3E-26 5E-31 186.7 12.7 102 81-183 1-102 (215)
14 TIGR01258 pgm_1 phosphoglycera 99.9 2.8E-26 6E-31 190.5 12.8 106 82-188 1-112 (245)
15 PRK14115 gpmA phosphoglyceromu 99.9 3.2E-26 6.9E-31 190.4 12.7 106 82-188 1-112 (247)
16 PRK13462 acid phosphatase; Pro 99.9 3.2E-26 7E-31 185.1 11.4 103 80-188 4-109 (203)
17 PRK07238 bifunctional RNase H/ 99.9 1.7E-25 3.8E-30 195.4 13.1 111 78-189 168-279 (372)
18 smart00855 PGAM Phosphoglycera 99.9 9.5E-25 2E-29 168.2 11.3 104 83-188 1-107 (155)
19 PF00300 His_Phos_1: Histidine 99.9 4.3E-25 9.2E-30 168.6 8.3 105 83-188 1-107 (158)
20 PTZ00322 6-phosphofructo-2-kin 99.9 5.7E-24 1.2E-28 198.2 10.1 107 80-189 418-544 (664)
21 KOG0235 Phosphoglycerate mutas 99.9 1.5E-23 3.3E-28 169.9 9.1 104 80-184 4-112 (214)
22 PTZ00123 phosphoglycerate muta 99.8 6.2E-20 1.3E-24 151.6 10.2 91 94-185 1-96 (236)
23 COG0588 GpmA Phosphoglycerate 99.8 1.9E-20 4.2E-25 150.4 6.8 103 81-184 1-108 (230)
24 cd07067 HP_PGM_like Histidine 99.8 4.5E-18 9.7E-23 130.1 9.1 80 83-163 1-83 (153)
25 PTZ00122 phosphoglycerate muta 99.7 1.1E-16 2.3E-21 136.7 11.6 78 81-164 102-190 (299)
26 PRK10848 phosphohistidine phos 99.7 4.2E-16 9.1E-21 121.6 10.3 77 82-163 1-81 (159)
27 COG2062 SixA Phosphohistidine 99.7 2.3E-16 4.9E-21 123.3 8.7 68 81-152 1-71 (163)
28 TIGR00249 sixA phosphohistidin 99.7 3.2E-16 6.9E-21 121.4 9.2 76 82-162 1-80 (152)
29 PRK15416 lipopolysaccharide co 99.7 5E-16 1.1E-20 125.2 10.4 87 79-169 52-139 (201)
30 cd07040 HP Histidine phosphata 99.6 6.6E-16 1.4E-20 117.2 8.6 77 83-160 1-81 (153)
31 PRK06193 hypothetical protein; 99.6 2.2E-15 4.9E-20 122.1 12.1 74 77-150 38-117 (206)
32 KOG4754 Predicted phosphoglyce 99.6 1E-14 2.2E-19 117.3 8.7 102 80-182 13-138 (248)
33 KOG0234 Fructose-6-phosphate 2 99.3 1.7E-12 3.7E-17 114.4 7.1 102 80-186 238-341 (438)
34 KOG4609 Predicted phosphoglyce 99.1 1.6E-10 3.4E-15 93.5 5.2 78 78-163 91-172 (284)
35 KOG3734 Predicted phosphoglyce 99.0 1.2E-09 2.6E-14 91.6 8.1 86 80-165 11-132 (272)
36 cd07061 HP_HAP_like Histidine 98.0 1.7E-05 3.8E-10 65.0 6.4 58 82-151 4-73 (242)
37 PF00328 His_Phos_2: Histidine 97.0 0.0012 2.6E-08 55.9 4.8 44 108-151 62-116 (347)
38 PRK10172 phosphoanhydride phos 96.2 0.034 7.3E-07 50.1 9.3 45 107-151 71-130 (436)
39 PRK10173 glucose-1-phosphatase 96.0 0.055 1.2E-06 48.5 9.5 70 82-151 33-128 (413)
40 KOG3720 Lysosomal & prostatic 95.9 0.03 6.5E-07 50.1 7.4 44 108-151 70-127 (411)
41 KOG1057 Arp2/3 complex-interac 89.6 0.41 8.9E-06 45.9 3.9 44 108-151 511-571 (1018)
42 KOG1382 Multiple inositol poly 79.6 3.5 7.6E-05 37.4 4.9 44 108-151 132-182 (467)
43 KOG3672 Histidine acid phospha 72.3 13 0.00029 33.3 6.4 41 108-148 168-223 (487)
No 1
>PRK14116 gpmA phosphoglyceromutase; Provisional
Probab=99.96 E-value=7.7e-29 Score=203.67 Aligned_cols=107 Identities=28% Similarity=0.403 Sum_probs=97.1
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcCC---CCe
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPL 155 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~~---~~v 155 (189)
|++|||||||+|.+|..++++|+.|. |||+.|++||+.+++.|++ ..++.|||||+.||+|||+++.+..+ +++
T Consensus 1 m~~l~LVRHGeT~~N~~~~~~G~~D~-pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~qTA~~i~~~~~~~~~~~ 79 (228)
T PRK14116 1 MAKLVLIRHGQSEWNLSNQFTGWVDV-DLSEKGVEEAKKAGRLIKEAGLEFDQAYTSVLTRAIKTLHYALEESDQLWIPE 79 (228)
T ss_pred CCEEEEEeCCCCCCccccCcCCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCcCCCCc
Confidence 47899999999999999999999984 8999999999999999984 68999999999999999999976543 678
Q ss_pred eecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 156 AFIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 156 ~~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
.++++|+|++||+|||++++++.+.+|+. +..|
T Consensus 80 ~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w 113 (228)
T PRK14116 80 TKTWRLNERHYGALQGLNKKETAEKYGDEQVHIW 113 (228)
T ss_pred ccCcccccccchhhcCCCHHHHHHHhhhhHHHHH
Confidence 89999999999999999999999999986 4444
No 2
>PRK13463 phosphatase PhoE; Provisional
Probab=99.96 E-value=9.6e-29 Score=199.51 Aligned_cols=108 Identities=29% Similarity=0.363 Sum_probs=102.2
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCCEEEECchHHHHHHHHHHHhcCCCCeeecCC
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~~ 160 (189)
+++|||||||++.+|..++++|+.| .|||+.|++||+.+++.+....++.|||||+.||+|||+.+++..++++.++++
T Consensus 2 ~~~i~lvRHG~t~~n~~~~~~G~~d-~~Lt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 80 (203)
T PRK13463 2 KTTVYVTRHGETEWNVAKRMQGRKN-SALTENGILQAKQLGERMKDLSIHAIYSSPSERTLHTAELIKGERDIPIIADEH 80 (203)
T ss_pred ceEEEEEeCCCCccchhCcccCCCC-CCcCHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHHhcCCCCceECcC
Confidence 4789999999999999999999988 589999999999999999988999999999999999999998888889999999
Q ss_pred cccccCCccCCCCHHHHHHHhHHHHHhhC
Q 029687 161 LKEAHLFFLEGMKNEIYGEQLGRLGRRSC 189 (189)
Q Consensus 161 L~E~~~G~~eG~~~~ei~~~~p~~~~~~~ 189 (189)
|+|+++|+|||++.+++.+.||+.+++|+
T Consensus 81 l~E~~~G~~eG~~~~e~~~~~p~~~~~~~ 109 (203)
T PRK13463 81 FYEINMGIWEGQTIDDIERQYPDDIQLFW 109 (203)
T ss_pred ceeCCCCccCCCcHHHHhhhCHHHHHHHH
Confidence 99999999999999999999999988763
No 3
>PRK15004 alpha-ribazole phosphatase; Provisional
Probab=99.96 E-value=2e-28 Score=196.73 Aligned_cols=106 Identities=26% Similarity=0.296 Sum_probs=100.9
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCCEEEECchHHHHHHHHHHHhcCCCCeeecCCc
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSL 161 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~~L 161 (189)
|+|||||||+|.+|..+++.|+.| .|||+.|++||+.+++.+++.+++.|||||+.||+|||+++++..++++.++++|
T Consensus 1 ~~i~lvRHG~t~~n~~~~~~G~~d-~pLt~~G~~Qa~~~~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L 79 (199)
T PRK15004 1 MRLWLVRHGETQANVDGLYSGHAP-TPLTARGIEQAQNLHTLLRDVPFDLVLCSELERAQHTARLVLSDRQLPVHIIPEL 79 (199)
T ss_pred CeEEEEeCCCCccccCCcEeCCCC-CCcCHHHHHHHHHHHHHHhCCCCCEEEECchHHHHHHHHHHHhcCCCCceeChhh
Confidence 579999999999999999999988 5899999999999999999999999999999999999999998888899999999
Q ss_pred ccccCCccCCCCHHHHHHHhHHHHHhh
Q 029687 162 KEAHLFFLEGMKNEIYGEQLGRLGRRS 188 (189)
Q Consensus 162 ~E~~~G~~eG~~~~ei~~~~p~~~~~~ 188 (189)
+|++||.|||++.+++.+.+|+.+.+|
T Consensus 80 ~E~~~G~~eg~~~~~~~~~~~~~~~~~ 106 (199)
T PRK15004 80 NEMFFGDWEMRHHRDLMQEDAENYAAW 106 (199)
T ss_pred eeCCCcccCCCCHHHHHHHCHHHHHHH
Confidence 999999999999999999999988776
No 4
>PRK14119 gpmA phosphoglyceromutase; Provisional
Probab=99.96 E-value=2.2e-28 Score=200.78 Aligned_cols=107 Identities=27% Similarity=0.354 Sum_probs=97.2
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcC---CCCe
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPL 155 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~---~~~v 155 (189)
|++|||||||+|.+|..++++|+.|. |||+.|++||+++++.|+. ..++.|||||+.||+|||+++++.. ++++
T Consensus 1 m~~l~LvRHGeT~~N~~~~~~G~~D~-pLt~~G~~QA~~l~~~L~~~~~~~d~i~sSpL~Ra~~TA~~i~~~~~~~~~~~ 79 (228)
T PRK14119 1 MPKLILCRHGQSEWNAKNLFTGWEDV-NLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPV 79 (228)
T ss_pred CCEEEEEeCCCCCcccCCCccCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEeCccHHHHHHHHHHHHhcccCCCCe
Confidence 46899999999999999999999984 8999999999999999984 5799999999999999999998654 3678
Q ss_pred eecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 156 AFIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 156 ~~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
.++++|+|++||+|||++++++.++||+. +..|
T Consensus 80 ~~~~~LrE~~fG~weG~~~~ei~~~~~~~~~~~w 113 (228)
T PRK14119 80 YKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIW 113 (228)
T ss_pred eECCCccccccccccCCcHHHHHHHccHHHHHHH
Confidence 99999999999999999999999999986 4455
No 5
>PRK14117 gpmA phosphoglyceromutase; Provisional
Probab=99.95 E-value=8.4e-28 Score=197.80 Aligned_cols=107 Identities=29% Similarity=0.321 Sum_probs=96.6
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHh---cCCCCe
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQ---GRDEPL 155 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~---~~~~~v 155 (189)
|++|||||||+|.+|..++++|+.|. |||+.|++||+.+++.|+ ...++.|||||+.||+|||+++.. ..++++
T Consensus 1 m~~l~LvRHG~t~~n~~~~~qG~~D~-~Lt~~G~~qa~~~~~~l~~~~~~~~~i~sSpl~Ra~~TA~~i~~~~~~~~~~~ 79 (230)
T PRK14117 1 MVKLVFARHGESEWNKANLFTGWADV-DLSEKGTQQAIDAGKLIKEAGIEFDLAFTSVLKRAIKTTNLALEASDQLWVPV 79 (230)
T ss_pred CCEEEEEeCccccCcccCCcCCCCCC-CcCHHHHHHHHHHHHHHHHcCCCCCEEEECCcHHHHHHHHHHHHhcccCCCCc
Confidence 47899999999999999999999985 899999999999999998 468999999999999999998864 245788
Q ss_pred eecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 156 AFIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 156 ~~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
.++++|+|++||.|||++++++.+.||+. +..|
T Consensus 80 ~~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w 113 (230)
T PRK14117 80 EKSWRLNERHYGGLTGKNKAEAAEQFGDEQVHIW 113 (230)
T ss_pred eeCCccccccchhhcCCCHHHHHHHccHHHHHHH
Confidence 99999999999999999999999999986 4444
No 6
>PRK14118 gpmA phosphoglyceromutase; Provisional
Probab=99.95 E-value=1.6e-27 Score=195.73 Aligned_cols=106 Identities=30% Similarity=0.403 Sum_probs=95.6
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcC---CCCee
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DEPLA 156 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~---~~~v~ 156 (189)
|+|||||||+|.+|..++++|+.|. |||+.|++||+.+++.|++ ..++.|||||+.||+|||+++++.. ++++.
T Consensus 1 m~l~LvRHG~t~~n~~~~~~G~~d~-~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSpl~Ra~~TA~~i~~~~~~~~~~~~ 79 (227)
T PRK14118 1 MELVFIRHGFSEWNAKNLFTGWRDV-NLTERGVEEAKAAGKKLKEAGYEFDIAFTSVLTRAIKTCNIVLEESNQLWIPQV 79 (227)
T ss_pred CEEEEEecCCCccccccCcCCCCCC-CCCHHHHHHHHHHHHHHHhcCCCCCEEEEeChHHHHHHHHHHHHhcCCCCCCee
Confidence 5799999999999999999999985 8999999999999999984 5799999999999999999998654 36788
Q ss_pred ecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 157 FIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 157 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
++++|+|++||+|||++++++.+.+|+. +..|
T Consensus 80 ~~~~LrE~~fG~wEG~~~~ei~~~~p~~~~~~w 112 (227)
T PRK14118 80 KNWRLNERHYGALQGLDKKATAEQYGDEQVHIW 112 (227)
T ss_pred cCCccccccCccccCCcHHHHHHHhhHHHHHHH
Confidence 9999999999999999999999999976 4444
No 7
>PRK01295 phosphoglyceromutase; Provisional
Probab=99.95 E-value=3.2e-27 Score=191.31 Aligned_cols=105 Identities=27% Similarity=0.390 Sum_probs=96.7
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCC---CCe
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD---EPL 155 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~---~~v 155 (189)
.++|||||||+|.+|..++++|+.| .|||+.|++||+.++++|+ ..+++.|||||+.||+|||++|++.++ +++
T Consensus 2 ~~~i~LVRHGet~~n~~~~~~G~~d-~~Lt~~G~~qA~~~~~~L~~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~~~ 80 (206)
T PRK01295 2 SRTLVLVRHGQSEWNLKNLFTGWRD-PDLTEQGVAEAKAAGRKLKAAGLKFDIAFTSALSRAQHTCQLILEELGQPGLET 80 (206)
T ss_pred CceEEEEeCCCCcccccCCcCCCCC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEeCCcHHHHHHHHHHHHHcCCCCCCe
Confidence 4789999999999999999999988 5899999999999999998 467999999999999999999988775 789
Q ss_pred eecCCcccccCCccCCCCHHHHHHHhHHHHH
Q 029687 156 AFIDSLKEAHLFFLEGMKNEIYGEQLGRLGR 186 (189)
Q Consensus 156 ~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~ 186 (189)
.++++|+|++||+|+|++.+++.+.+|+.+.
T Consensus 81 ~~~~~L~E~~~G~~eg~~~~e~~~~~~~~~~ 111 (206)
T PRK01295 81 IRDQALNERDYGDLSGLNKDDARAKWGEEQV 111 (206)
T ss_pred EECCcccccccccccCCcHHHHHHHchHHHH
Confidence 9999999999999999999999999987543
No 8
>PRK01112 phosphoglyceromutase; Provisional
Probab=99.94 E-value=5.9e-27 Score=192.67 Aligned_cols=106 Identities=24% Similarity=0.322 Sum_probs=96.3
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCCEEEECchHHHHHHHHHHHhc----------
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQG---------- 150 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~l~~~---------- 150 (189)
|++|||||||++.+|..++++|+.| .|||+.|++||..++++|++.+++.|||||+.||+|||+.+.+.
T Consensus 1 M~~L~LvRHGqt~~n~~~~~~G~~D-~~Lte~G~~Qa~~l~~~L~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (228)
T PRK01112 1 MALLILLRHGQSVWNAKNLFTGWVD-IPLSQQGIAEAIAAGEKIKDLPIDCIFTSTLVRSLMTALLAMTNHSSGKIPYIV 79 (228)
T ss_pred CcEEEEEeCCCCccccccccCCCCC-CCcCHHHHHHHHHHHHHhhcCCCCEEEEcCcHHHHHHHHHHHHhhccccccccc
Confidence 5789999999999999999999998 48999999999999999999999999999999999999998742
Q ss_pred -------------------CCCCeeecCCcccccCCccCCCCHHHHHHHhHHHHHh
Q 029687 151 -------------------RDEPLAFIDSLKEAHLFFLEGMKNEIYGEQLGRLGRR 187 (189)
Q Consensus 151 -------------------~~~~v~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~ 187 (189)
..+++..+++|+|++||+|||++++++.+.+|+.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~E~~~G~~eG~~~~ei~~~~~~~~~~ 135 (228)
T PRK01112 80 HEEDDKKWMSRIYSDEEPEQMIPLFQSSALNERMYGELQGKNKAETAEKFGEEQVK 135 (228)
T ss_pred ccccccccccccccccccccCCCeeecCccccccccccCCCCHHHHHHHCcHHHHH
Confidence 2357888999999999999999999999999876543
No 9
>PRK14120 gpmA phosphoglyceromutase; Provisional
Probab=99.94 E-value=8.4e-27 Score=194.07 Aligned_cols=109 Identities=26% Similarity=0.263 Sum_probs=98.0
Q ss_pred CCCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcC---CC
Q 029687 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGR---DE 153 (189)
Q Consensus 79 ~~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~---~~ 153 (189)
.+|++|||||||+|.+|..++++|+.|. |||+.|++||+.+++.|+. ..++.|||||+.||+|||+++++.. ++
T Consensus 2 ~~m~~i~LVRHGqt~~n~~~~~~G~~D~-pLTe~G~~QA~~~a~~l~~~~~~~~~IysSpl~Ra~qTA~~i~~~~~~~~~ 80 (249)
T PRK14120 2 MMTYTLVLLRHGESEWNAKNLFTGWVDV-DLTEKGEAEAKRGGELLAEAGVLPDVVYTSLLRRAIRTANLALDAADRLWI 80 (249)
T ss_pred CCCcEEEEEeCCCCcccccCCcCCCCCC-CcCHHHHHHHHHHHHHHHhcCCCCCEEEecChHHHHHHHHHHHHhcccCCC
Confidence 3678999999999999999999999885 8999999999999999984 4689999999999999999996533 46
Q ss_pred CeeecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 154 PLAFIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 154 ~v~~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
++.++++|+|++||.|||+++.++.++||+. +..|
T Consensus 81 ~i~~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~w 116 (249)
T PRK14120 81 PVRRSWRLNERHYGALQGKDKAETKAEYGEEQFMLW 116 (249)
T ss_pred CeEECCCcccccccccCCCCHHHHHHHccHHHHHHH
Confidence 7899999999999999999999999999974 6665
No 10
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family. A three-gene system broadly conserved among the Actinobacteria includes MSMEG_4193 and homologs, a subgroup among the larger phosphoglycerate mutase family protein (pfam00300). Another member of the trio is a probable kinase, related to phosphatidylinositol kinases; that context supports the hypothesis that this protein acts as a phosphomutase.
Probab=99.94 E-value=7.5e-27 Score=188.19 Aligned_cols=98 Identities=29% Similarity=0.309 Sum_probs=92.5
Q ss_pred EEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCCEEEECchHHHHHHHHHHHhcCCCCeeecCCcc
Q 029687 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSLK 162 (189)
Q Consensus 83 ~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~~L~ 162 (189)
+||||||||+.+|..++++|+.|+.|||+.|++||+.+++.|++.+++.|||||+.||+|||+++++.+++++.++++|+
T Consensus 1 ~i~lvRHG~t~~n~~~~~~g~~~d~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~ 80 (204)
T TIGR03848 1 TVILVRHGRSTANTAGTLAGRTPGVDLDERGREQAAALAERLADLPIAAIVSSPLERCRETAEPIAEARGLPPRVDERLG 80 (204)
T ss_pred CEEEEeCCCCCccccccccCCCCCCCcCHHHHHHHHHHHHHHhcCCCCEEEeCcHHHHHHHHHHHHHhcCCCceECcccc
Confidence 48999999999999999999986568999999999999999999999999999999999999999988889999999999
Q ss_pred cccCCccCCCCHHHHHHH
Q 029687 163 EAHLFFLEGMKNEIYGEQ 180 (189)
Q Consensus 163 E~~~G~~eG~~~~ei~~~ 180 (189)
|++||+|+|++++++.+.
T Consensus 81 E~~~G~~eG~~~~e~~~~ 98 (204)
T TIGR03848 81 ECDYGDWTGRELKELAKE 98 (204)
T ss_pred cCCCCeeCCcCHHHHhCc
Confidence 999999999999998754
No 11
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
Probab=99.94 E-value=1.3e-26 Score=186.70 Aligned_cols=107 Identities=38% Similarity=0.450 Sum_probs=101.9
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCCCCeeec
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRDEPLAFI 158 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~ 158 (189)
+++|||||||||.+|..++++|+.| .|||+.|++||+.+++.|. +..++.||+||+.||+|||+.+++.++.++.++
T Consensus 2 ~~~i~lvRHGqt~~n~~~~~~G~~d-~pLt~~G~~QA~~l~~~l~~~~~~~~~i~sS~l~Ra~~TA~~~a~~~~~~~~~~ 80 (208)
T COG0406 2 MMRLYLVRHGETEWNVEGRLQGWTD-SPLTEEGRAQAEALAERLAARDIGFDAIYSSPLKRAQQTAEPLAEELGLPLEVD 80 (208)
T ss_pred ceEEEEEecCCccccccccccCCCC-CCCCHHHHHHHHHHHHHHhhcCCCCCEEEECchHHHHHHHHHHHHhcCCCceec
Confidence 5889999999999999999999766 5899999999999999999 689999999999999999999999999999999
Q ss_pred CCcccccCCccCCCCHHHHHHHhHHHHHhh
Q 029687 159 DSLKEAHLFFLEGMKNEIYGEQLGRLGRRS 188 (189)
Q Consensus 159 ~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~ 188 (189)
+.|+|+++|+|||++.+++.+.+|+.+..|
T Consensus 81 ~~l~E~~~G~~eg~~~~e~~~~~p~~~~~~ 110 (208)
T COG0406 81 DRLREIDFGDWEGLTIDELAEEPPEELAAW 110 (208)
T ss_pred CCeeEeecccccCCcHHHHHHhCHHHHHHH
Confidence 999999999999999999999999998877
No 12
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=99.94 E-value=1.4e-26 Score=181.90 Aligned_cols=102 Identities=29% Similarity=0.329 Sum_probs=95.1
Q ss_pred EEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCCEEEECchHHHHHHHHHHHhcCCCCeeecCCccc
Q 029687 84 VTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDSLKE 163 (189)
Q Consensus 84 i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~~L~E 163 (189)
|||||||++.+|..+++ |..| .|||+.|++||+.+++.|++..++.|||||+.||+|||++++..+++++.++++|+|
T Consensus 1 i~lvRHg~t~~n~~~~~-g~~d-~~Lt~~G~~qa~~l~~~l~~~~~~~i~sSpl~Ra~qTA~~i~~~~~~~~~~~~~L~E 78 (177)
T TIGR03162 1 LYLIRHGETDVNAGLCY-GQTD-VPLAEKGAEQAAALREKLADVPFDAVYSSPLSRCRELAEILAERRGLPIIKDPRLRE 78 (177)
T ss_pred CEEEeCCCCccCCCcee-CCCC-CCcChhHHHHHHHHHHHhcCCCCCEEEECchHHHHHHHHHHHhhcCCCceECCcccc
Confidence 68999999999998888 8877 589999999999999999989999999999999999999999888889999999999
Q ss_pred ccCCccCCCCHHHHHHHhHHHHHhh
Q 029687 164 AHLFFLEGMKNEIYGEQLGRLGRRS 188 (189)
Q Consensus 164 ~~~G~~eG~~~~ei~~~~p~~~~~~ 188 (189)
+++|.|+|++.+++.+.+| .+.+|
T Consensus 79 ~~~G~~~g~~~~~~~~~~~-~~~~~ 102 (177)
T TIGR03162 79 MDFGDWEGRSWDEIPEAYP-ELDAW 102 (177)
T ss_pred ccCCccCCCCHHHHHHhCH-HHHHH
Confidence 9999999999999999998 45555
No 13
>PRK03482 phosphoglycerate mutase; Provisional
Probab=99.94 E-value=2.3e-26 Score=186.73 Aligned_cols=102 Identities=32% Similarity=0.398 Sum_probs=95.1
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCCEEEECchHHHHHHHHHHHhcCCCCeeecCC
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~~ 160 (189)
|++|||||||++.+|..++++|..| .|||+.|++||+.+++.|....++.|||||+.||+|||+++++.+++++.++++
T Consensus 1 m~~i~lvRHG~t~~n~~~~~~g~~d-~~Lt~~G~~qA~~~~~~l~~~~~~~I~sSpl~Ra~qTA~~i~~~~~~~~~~~~~ 79 (215)
T PRK03482 1 MLQVYLVRHGETQWNAERRIQGQSD-SPLTAKGEQQAMQVAERAKELGITHIISSDLGRTRRTAEIIAQACGCDIIFDPR 79 (215)
T ss_pred CcEEEEEeCCCcccccccccCCCCC-CCcCHHHHHHHHHHHHHHhcCCCCEEEECCcHHHHHHHHHHHHhcCCCeeEChh
Confidence 5789999999999999998999887 589999999999999999988999999999999999999999888899999999
Q ss_pred cccccCCccCCCCHHHHHHHhHH
Q 029687 161 LKEAHLFFLEGMKNEIYGEQLGR 183 (189)
Q Consensus 161 L~E~~~G~~eG~~~~ei~~~~p~ 183 (189)
|+|+++|.|+|++.+++...++.
T Consensus 80 L~E~~~G~~eg~~~~~~~~~~~~ 102 (215)
T PRK03482 80 LRELNMGVLEKRHIDSLTEEEEG 102 (215)
T ss_pred ccccCCccccCCcHHHHHhhHHH
Confidence 99999999999999998766553
No 14
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1. Most members of this family are phosphoglycerate mutase (EC 5.4.2.1). This enzyme interconverts 2-phosphoglycerate and 3-phosphoglycerate. The enzyme is transiently phosphorylated on an active site histidine by 2,3-diphosphoglyerate, which is both substrate and product. Some members of this family have are phosphoglycerate mutase as a minor activity and act primarily as a bisphoglycerate mutase, interconverting 2,3-diphosphoglycerate and 1,3-diphosphoglycerate (EC 5.4.2.4). This model is designated as a subfamily for this reason. The second and third paralogs in S. cerevisiae are somewhat divergent and apparently inactive (see PUBMED:9544241) but are also part of this subfamily phylogenetically.
Probab=99.94 E-value=2.8e-26 Score=190.54 Aligned_cols=106 Identities=29% Similarity=0.355 Sum_probs=96.3
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcCC---CCee
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLA 156 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~~---~~v~ 156 (189)
|+|||||||+|.+|..++++|+.| .+||+.|++||+.+++.|+. ..++.|||||+.||+|||++++..++ .++.
T Consensus 1 ~~l~lVRHGqt~~n~~~~~~G~~D-~~Lt~~G~~QA~~la~~L~~~~~~~d~iysSpl~Ra~qTA~ii~~~~~~~~~~i~ 79 (245)
T TIGR01258 1 MKLVLVRHGESEWNALNLFTGWVD-VKLSEKGQQEAKRAGELLKEEGYEFDVAYTSLLKRAIHTLNIALDELDQLWIPVK 79 (245)
T ss_pred CEEEEEeCCCcCccccCCcCCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcChHHHHHHHHHHHHhcCCCCCCee
Confidence 579999999999999999999988 48999999999999999974 57899999999999999999988765 6788
Q ss_pred ecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 157 FIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 157 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
++++|+|++||+|||++++++.+.||+. +..|
T Consensus 80 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~w 112 (245)
T TIGR01258 80 KSWRLNERHYGALQGLNKAETAAKYGEEQVNIW 112 (245)
T ss_pred eCcccccccCCCCcCCCHHHHHHHhhHHHHHHH
Confidence 8999999999999999999999999975 4444
No 15
>PRK14115 gpmA phosphoglyceromutase; Provisional
Probab=99.94 E-value=3.2e-26 Score=190.39 Aligned_cols=106 Identities=31% Similarity=0.410 Sum_probs=96.3
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcCC---CCee
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRD---EPLA 156 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~~---~~v~ 156 (189)
|+|||||||+|.+|..++++|+.| .|||+.|++||+.+++.|+. ..++.|||||+.||+|||+.+.+.++ +++.
T Consensus 1 ~~i~LVRHGqt~~n~~~~~~G~~D-~pLte~G~~QA~~la~~L~~~~~~~d~IysSpl~Ra~qTA~~i~~~~~~~~~~~~ 79 (247)
T PRK14115 1 TKLVLIRHGESQWNKENRFTGWTD-VDLSEKGVSEAKAAGKLLKEEGYTFDVAYTSVLKRAIRTLWIVLDELDQMWLPVE 79 (247)
T ss_pred CEEEEEECCCcccccccCcCCCCC-CCcCHHHHHHHHHHHHHHHhcCCCCCEEEEcCCHHHHHHHHHHHHHcCCCCCCce
Confidence 579999999999999999999988 48999999999999999984 57899999999999999999987765 4789
Q ss_pred ecCCcccccCCccCCCCHHHHHHHhHHH-HHhh
Q 029687 157 FIDSLKEAHLFFLEGMKNEIYGEQLGRL-GRRS 188 (189)
Q Consensus 157 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~-~~~~ 188 (189)
++++|+|++||+|||++++++.+.+|+. +..|
T Consensus 80 ~~~~L~E~~fG~~eG~~~~ei~~~~~~~~~~~~ 112 (247)
T PRK14115 80 KSWRLNERHYGALQGLNKAETAAKYGDEQVKIW 112 (247)
T ss_pred ECccccccccccccCCCHHHHHHHhhHHHHHHH
Confidence 9999999999999999999999999975 4444
No 16
>PRK13462 acid phosphatase; Provisional
Probab=99.94 E-value=3.2e-26 Score=185.11 Aligned_cols=103 Identities=30% Similarity=0.323 Sum_probs=92.2
Q ss_pred CCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcCCCC--EEEECchHHHHHHHHHHHhcCCCCe-e
Q 029687 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNIYFD--QCFSSPICRAKSTAEILWQGRDEPL-A 156 (189)
Q Consensus 80 ~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~~~~--~I~sSpl~Ra~qTA~~l~~~~~~~v-~ 156 (189)
.+++|||||||+|.+|..++++|+.|. |||+.|++||+.+++.++...++ .|||||+.||+|||+.+. .++ .
T Consensus 4 ~~~~i~LvRHG~t~~n~~~~~~G~~d~-pLt~~G~~QA~~l~~~l~~~~~~~~~i~sSpl~Ra~qTA~~i~----~~~~~ 78 (203)
T PRK13462 4 RNHRLLLLRHGETEWSKSGRHTGRTEL-ELTETGRTQAELAGQALGELELDDPLVISSPRRRALDTAKLAG----LTVDE 78 (203)
T ss_pred cccEEEEEeCCCCCcccCCCccCCCCC-CCCHHHHHHHHHHHHHHHhCCCCCCEEEECchHHHHHHHHHhc----Ccccc
Confidence 578999999999999999999999884 89999999999999999977777 799999999999999882 233 6
Q ss_pred ecCCcccccCCccCCCCHHHHHHHhHHHHHhh
Q 029687 157 FIDSLKEAHLFFLEGMKNEIYGEQLGRLGRRS 188 (189)
Q Consensus 157 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~ 188 (189)
++++|+|++||.|||++.+|+.+.+|+ |..|
T Consensus 79 ~~~~LrE~~~G~~eG~~~~ei~~~~~~-~~~~ 109 (203)
T PRK13462 79 VSGLLAEWDYGSYEGLTTPQIRESEPD-WLVW 109 (203)
T ss_pred cCccccccCCccccCCcHHHHHHhCch-HHhh
Confidence 799999999999999999999999997 3344
No 17
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional
Probab=99.93 E-value=1.7e-25 Score=195.42 Aligned_cols=111 Identities=29% Similarity=0.295 Sum_probs=104.2
Q ss_pred cCCCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcC-CCCEEEECchHHHHHHHHHHHhcCCCCee
Q 029687 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI-YFDQCFSSPICRAKSTAEILWQGRDEPLA 156 (189)
Q Consensus 78 ~~~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~-~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~ 156 (189)
...+++|||||||++.+|..++++|..| .|||+.|++||+.+++.|... +++.|||||+.||+|||+.+.+.++.++.
T Consensus 168 ~~~~~~i~LvRHGet~~n~~~~~~g~~D-~~Lt~~G~~QA~~l~~~l~~~~~~d~i~sSpl~Ra~qTA~~i~~~~~~~~~ 246 (372)
T PRK07238 168 RGTPTRLLLLRHGQTELSVQRRYSGRGN-PELTEVGRRQAAAAARYLAARGGIDAVVSSPLQRARDTAAAAAKALGLDVT 246 (372)
T ss_pred CCCceEEEEEeCCCCCcccCCeeeCCCC-CCcCHHHHHHHHHHHHHHhccCCCCEEEECChHHHHHHHHHHHHhcCCCcE
Confidence 3467999999999999999999999888 489999999999999999977 89999999999999999999998888999
Q ss_pred ecCCcccccCCccCCCCHHHHHHHhHHHHHhhC
Q 029687 157 FIDSLKEAHLFFLEGMKNEIYGEQLGRLGRRSC 189 (189)
Q Consensus 157 ~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~~ 189 (189)
++++|+|++||+|+|++.+++.+.+|+.+..|+
T Consensus 247 ~~~~L~E~~~G~~eg~~~~ei~~~~p~~~~~w~ 279 (372)
T PRK07238 247 VDDDLIETDFGAWEGLTFAEAAERDPELHRAWL 279 (372)
T ss_pred ECccceeCCCCccCCCCHHHHHHHCHHHHHHHH
Confidence 999999999999999999999999999998885
No 18
>smart00855 PGAM Phosphoglycerate mutase family. Phosphoglycerate mutase (PGAM) and bisphosphoglycerate mutase (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate PUBMED:2847721, PUBMED:2831102, PUBMED:10958932. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein.
Probab=99.92 E-value=9.5e-25 Score=168.24 Aligned_cols=104 Identities=33% Similarity=0.338 Sum_probs=93.9
Q ss_pred EEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc---CCCCEEEECchHHHHHHHHHHHhcCCCCeeecC
Q 029687 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN---IYFDQCFSSPICRAKSTAEILWQGRDEPLAFID 159 (189)
Q Consensus 83 ~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~---~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~ 159 (189)
+|||||||++.+|..+.+.|..| .|||+.|++||+.+++.|.. ..++.|||||+.||+|||+.+.+.++.++ +++
T Consensus 1 ~i~lvRHG~s~~n~~~~~~g~~d-~~Lt~~G~~qa~~~a~~l~~~~~~~~~~i~sSpl~Ra~qTa~~i~~~~~~~~-~~~ 78 (155)
T smart00855 1 RLYLIRHGETEANREGRLTGWTD-SPLTELGRAQAEALGELLASLGRLRFDVIYSSPLLRARETAEALAIALGLGE-VDP 78 (155)
T ss_pred CEEEEeCCCCcccccCeEcCCCC-CCCCHHHHHHHHHHHHHHHhccCCCCCEEEeCchHHHHHHHHHHHHhcCCCC-CCh
Confidence 48999999999998888888755 68999999999999999985 58999999999999999999998877664 889
Q ss_pred CcccccCCccCCCCHHHHHHHhHHHHHhh
Q 029687 160 SLKEAHLFFLEGMKNEIYGEQLGRLGRRS 188 (189)
Q Consensus 160 ~L~E~~~G~~eG~~~~ei~~~~p~~~~~~ 188 (189)
.|+|+++|.|+|++.+++.+.+|+.+..|
T Consensus 79 ~L~E~~~G~~~g~~~~~~~~~~~~~~~~~ 107 (155)
T smart00855 79 RLRERDYGAWEGLTKEEERAKAWTRPADW 107 (155)
T ss_pred hhhhcccceecCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999887665
No 19
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members. Phosphoglycerate mutase (5.4.2.1 from EC) (PGAM) and bisphosphoglycerate mutase (5.4.2.4 from EC) (BPGM) are structurally related enzymes that catalyse reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate [, , ]. Both enzymes can catalyse three different reactions with different specificities, the isomerization of 2-phosphoglycerate (2-PGA) to 3-phosphoglycerate (3-PGA) with 2,3-diphosphoglycerate (2,3-DPG) as the primer of the reaction, the synthesis of 2,3-DPG from 1,3-DPG with 3-PGA as a primer and the degradation of 2,3-DPG to 3-PGA (phosphatase 3.1.3.13 from EC activity). In mammals, PGAM is a dimeric protein with two isoforms, the M (muscle) and B (brain) forms. In yeast, PGAM is a tetrameric protein. BPGM is a dimeric protein and is found mainly in erythrocytes where it plays a major role in regulating haemoglobin oxygen affinity as a consequence of controlling 2,3-DPG concentration. The catalytic mechanism of both PGAM and BPGM involves the formation of a phosphohistidine intermediate []. A number of other proteins including, the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [] that catalyses both the synthesis and the degradation of fructose-2,6-bisphosphate and bacterial alpha-ribazole-5'-phosphate phosphatase, which is involved in cobalamin biosynthesis, contain this domain [].; PDB: 1C80_A 1C7Z_B 1TIP_B 1C81_A 1FBT_A 1RII_B 3OI7_B 3LL4_A 3LG2_B 3F3K_B ....
Probab=99.92 E-value=4.3e-25 Score=168.60 Aligned_cols=105 Identities=34% Similarity=0.395 Sum_probs=97.0
Q ss_pred EEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCCCCeeecCC
Q 029687 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRDEPLAFIDS 160 (189)
Q Consensus 83 ~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~~~~ 160 (189)
+|||||||++.+|..+++.|+.|. |||+.|++||+.+++.|. ...++.|||||+.||+|||+.+++.++.++.+++.
T Consensus 1 ~i~liRHg~~~~n~~~~~~~~~d~-~Lt~~G~~qA~~~~~~l~~~~~~~~~i~~Sp~~R~~qTA~~~~~~~~~~~~~~~~ 79 (158)
T PF00300_consen 1 RIYLIRHGESEFNAEGRVQGDSDP-PLTERGREQARQLGEYLAERDIQIDVIYSSPLRRCIQTAEIIAEGLGIEIIVDPR 79 (158)
T ss_dssp EEEEEE-S-BHHHHTTBCGTTSST-GBEHHHHHHHHHHHHHHHHTTSSCSEEEEESSHHHHHHHHHHHHHHTSEEEEEGG
T ss_pred CEEEEECCccccccCCCcCCCCCc-cccHHHHHHHHhhcccccccccCceEEecCCcchhhhhhchhhcccccccccccc
Confidence 589999999999998889998885 899999999999999998 88999999999999999999999988889999999
Q ss_pred cccccCCccCCCCHHHHHHHhHHHHHhh
Q 029687 161 LKEAHLFFLEGMKNEIYGEQLGRLGRRS 188 (189)
Q Consensus 161 L~E~~~G~~eG~~~~ei~~~~p~~~~~~ 188 (189)
|+|+++|.|+|++..++.+.+|+.+..|
T Consensus 80 l~E~~~g~~~g~~~~~~~~~~~~~~~~~ 107 (158)
T PF00300_consen 80 LREIDFGDWEGRPFDEIEEKFPDEFEAW 107 (158)
T ss_dssp GSCCGCGGGTTSBHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccchhhHHhhhhcccchh
Confidence 9999999999999999999999777666
No 20
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.90 E-value=5.7e-24 Score=198.18 Aligned_cols=107 Identities=19% Similarity=0.069 Sum_probs=96.4
Q ss_pred CCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcC---CCCEEEECchHHHHHHHHHHHhc------
Q 029687 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI---YFDQCFSSPICRAKSTAEILWQG------ 150 (189)
Q Consensus 80 ~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~---~~~~I~sSpl~Ra~qTA~~l~~~------ 150 (189)
.+|+|||||||||.+|..++++| | .|||+.|++||+++++.+++. .++.|||||+.||+|||+++.+.
T Consensus 418 ~~m~i~LiRHGeT~~n~~~r~~G--d-~pLt~~G~~qA~~l~~~l~~~~~~~~~~V~sSpl~Ra~~TA~~i~~~~~~~~~ 494 (664)
T PTZ00322 418 TPMNLYLTRAGEYVDLLSGRIGG--N-SRLTERGRAYSRALFEYFQKEISTTSFTVMSSCAKRCTETVHYFAEESILQQS 494 (664)
T ss_pred CCceEEEEecccchhhhcCccCC--C-CccCHHHHHHHHHHHHHHHhccCCCCcEEEcCCcHHHHHHHHHHHhccccccc
Confidence 45789999999999999999988 4 589999999999999999853 46799999999999999998753
Q ss_pred -----------CCCCeeecCCcccccCCccCCCCHHHHHHHhHHHHHhhC
Q 029687 151 -----------RDEPLAFIDSLKEAHLFFLEGMKNEIYGEQLGRLGRRSC 189 (189)
Q Consensus 151 -----------~~~~v~~~~~L~E~~~G~~eG~~~~ei~~~~p~~~~~~~ 189 (189)
+++++..+++|+|++||+|||++++|+.+.||+.|.+|+
T Consensus 495 ~~~~a~~~~~~~~~~~~~~~~L~Ei~fG~wEG~t~~ei~~~~p~~~~~~~ 544 (664)
T PTZ00322 495 TASAASSQSPSLNCRVLYFPTLDDINHGDCEGQLLSDVRRTMPNTLQSMK 544 (664)
T ss_pred cccccccccccccccccchhhhCcCCCcccCCCCHHHHHHhCcHHHHHHH
Confidence 356788999999999999999999999999999999884
No 21
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.5e-23 Score=169.88 Aligned_cols=104 Identities=36% Similarity=0.524 Sum_probs=97.7
Q ss_pred CCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCC---CC
Q 029687 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD---EP 154 (189)
Q Consensus 80 ~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~---~~ 154 (189)
...+++|||||||+||..++++|+.|+ +||+.|.+||.++++.+. ++.++.+|||++.||.|||+.+.+..+ ++
T Consensus 4 ~~~~lvlvRHGes~wN~e~~~~G~~D~-~Lte~G~~qA~~~~~~l~~~~~~~~~~~tS~l~RakqT~~~il~~~~~~~~p 82 (214)
T KOG0235|consen 4 NTFRLVLVRHGESEWNKENIFQGWIDA-PLTEKGEEQAKAAAQRLKDLNIEFDVCYTSDLKRAKQTAELILEELKQKKVP 82 (214)
T ss_pred cceEEEEEecCchhhhhhCcccccccC-ccChhhHHHHHHHHHHHHhcCCcccEEecCHHHHHHHHHHHHHHhhccCCcc
Confidence 567899999999999999999999997 899999999999999999 456888899999999999999998876 88
Q ss_pred eeecCCcccccCCccCCCCHHHHHHHhHHH
Q 029687 155 LAFIDSLKEAHLFFLEGMKNEIYGEQLGRL 184 (189)
Q Consensus 155 v~~~~~L~E~~~G~~eG~~~~ei~~~~p~~ 184 (189)
+..+.+|+|++||+++|+...|+.+.+++.
T Consensus 83 v~~~~~L~ER~yG~l~Gl~~~e~~~~~g~~ 112 (214)
T KOG0235|consen 83 VLYTWRLNERHYGDLQGLNKRETAKRYGEE 112 (214)
T ss_pred eEechhhchhhhccccCccHHHHHHHcchh
Confidence 999999999999999999999999999977
No 22
>PTZ00123 phosphoglycerate mutase like-protein; Provisional
Probab=99.82 E-value=6.2e-20 Score=151.59 Aligned_cols=91 Identities=31% Similarity=0.415 Sum_probs=82.9
Q ss_pred CCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCC---CCeeecCCcccccCCc
Q 029687 94 WNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD---EPLAFIDSLKEAHLFF 168 (189)
Q Consensus 94 ~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~---~~v~~~~~L~E~~~G~ 168 (189)
+|..++++|+.| .|||+.|++||+.+++.|+ +..++.|||||+.||+|||+++.+.++ +++.++++|+|++||.
T Consensus 1 ~N~~~~~qG~~D-~pLTe~G~~QA~~l~~~L~~~~~~~d~iysSpl~Ra~qTA~~i~~~~~~~~~~~~~~~~L~E~~~G~ 79 (236)
T PTZ00123 1 WNKENRFTGWTD-VPLSEKGVQEAREAGKLLKEKGFRFDVVYTSVLKRAIKTAWIVLEELGQLHVPVIKSWRLNERHYGA 79 (236)
T ss_pred CcccCceeCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCEEEECChHHHHHHHHHHHHhcCCCCCCceeCchhhhccccc
Confidence 577889999998 5899999999999999997 478999999999999999999987665 5788999999999999
Q ss_pred cCCCCHHHHHHHhHHHH
Q 029687 169 LEGMKNEIYGEQLGRLG 185 (189)
Q Consensus 169 ~eG~~~~ei~~~~p~~~ 185 (189)
|||++++++.+.+|+.+
T Consensus 80 ~EG~~~~ei~~~~~~~~ 96 (236)
T PTZ00123 80 LQGLNKSETAEKHGEEQ 96 (236)
T ss_pred ccCCCHHHHHHHccHHH
Confidence 99999999999999863
No 23
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.9e-20 Score=150.38 Aligned_cols=103 Identities=30% Similarity=0.411 Sum_probs=96.0
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcC---CCCe
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGR---DEPL 155 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~---~~~v 155 (189)
|++++|+||||++||..+.+.||.|. +||++|++||...|+.|+ ++.||.+|||-+.||++|+.++.... .+++
T Consensus 1 ~~~Lvl~RHGqSeWN~~NlFtGW~Dv-~LtekG~~EA~~ag~llk~~~~~~dia~TS~L~RAi~T~~i~L~e~d~~~ipv 79 (230)
T COG0588 1 MMKLVLLRHGQSEWNKENLFTGWVDV-DLTEKGISEAKAAGKLLKEEGLEFDIAYTSVLKRAIKTLNIVLEESDQLWIPV 79 (230)
T ss_pred CceEEEEecCchhhhhcCceeeeeec-CcchhhHHHHHHHHHHHHHcCCCcceeehHHHHHHHHHHHHHhhhhcccCcch
Confidence 46899999999999999999999996 799999999999999999 48999999999999999999998765 5788
Q ss_pred eecCCcccccCCccCCCCHHHHHHHhHHH
Q 029687 156 AFIDSLKEAHLFFLEGMKNEIYGEQLGRL 184 (189)
Q Consensus 156 ~~~~~L~E~~~G~~eG~~~~ei~~~~p~~ 184 (189)
...-+|+|++||.++|...++..++|.+.
T Consensus 80 ~kswrLNERhYG~LqGlnK~~t~~kyGee 108 (230)
T COG0588 80 IKSWRLNERHYGALQGLNKAETAAKYGEE 108 (230)
T ss_pred hhHHHhhhhhhhhhhcCChHHHHHHHhHH
Confidence 88899999999999999999999999854
No 24
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phos
Probab=99.75 E-value=4.5e-18 Score=130.13 Aligned_cols=80 Identities=44% Similarity=0.645 Sum_probs=72.1
Q ss_pred EEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcC--CCCEEEECchHHHHHHHHHHHhcC-CCCeeecC
Q 029687 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRAKSTAEILWQGR-DEPLAFID 159 (189)
Q Consensus 83 ~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~--~~~~I~sSpl~Ra~qTA~~l~~~~-~~~v~~~~ 159 (189)
+|||||||++.++......+..| +|||+.|++||+.+++.|... .++.|||||+.||+|||+.+++.+ +.++..++
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d-~~Lt~~G~~qa~~~~~~l~~~~~~~~~i~~Sp~~Ra~qTa~~l~~~~~~~~~~~~~ 79 (153)
T cd07067 1 RLYLVRHGESEWNAEGRFQGWTD-VPLTEKGREQARALGKRLKELGIKFDRIYSSPLKRAIQTAEIILEELPGLPVEVDP 79 (153)
T ss_pred CEEEEECCCCcccccCcccCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCEEEECcHHHHHHHHHHHHHhcCCCCceeCc
Confidence 48999999999988766666666 689999999999999999965 899999999999999999999887 78899999
Q ss_pred Cccc
Q 029687 160 SLKE 163 (189)
Q Consensus 160 ~L~E 163 (189)
.|+|
T Consensus 80 ~L~e 83 (153)
T cd07067 80 RLRE 83 (153)
T ss_pred cchH
Confidence 9999
No 25
>PTZ00122 phosphoglycerate mutase; Provisional
Probab=99.70 E-value=1.1e-16 Score=136.67 Aligned_cols=78 Identities=32% Similarity=0.315 Sum_probs=66.9
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCCC--CCCcHHHHHHHHHHHHHHhcC--------CCCEEEECchHHHHHHHHHHHhc
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSNL--SVLTEAGVRQAERCRKALRNI--------YFDQCFSSPICRAKSTAEILWQG 150 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d~--~pLt~~G~~qA~~~~~~l~~~--------~~~~I~sSpl~Ra~qTA~~l~~~ 150 (189)
.++||||||||+.++. ..|+ .+||+.|++||+.+++.|++. .++.|||||+.||+|||+++++.
T Consensus 102 ~~~L~LVRHGq~~~~~------~~d~~~~~LTe~G~~QA~~lg~~L~~~~~~~~~~~~~d~IysSPL~RA~qTAeiIa~~ 175 (299)
T PTZ00122 102 QRQIILVRHGQYINES------SNDDNIKRLTELGKEQARITGKYLKEQFGEILVDKKVKAIYHSDMTRAKETAEIISEA 175 (299)
T ss_pred eeEEEEEECCCCCCCC------CCCcccCCCCHHHHHHHHHHHHHHHHhhccccccCCCCEEEEcCcHHHHHHHHHHHHh
Confidence 3899999999965542 3443 359999999999999999864 89999999999999999999886
Q ss_pred C-CCCeeecCCcccc
Q 029687 151 R-DEPLAFIDSLKEA 164 (189)
Q Consensus 151 ~-~~~v~~~~~L~E~ 164 (189)
+ ++++.++++|+|.
T Consensus 176 ~~~~~v~~d~~LrEG 190 (299)
T PTZ00122 176 FPGVRLIEDPNLAEG 190 (299)
T ss_pred CCCCCceeCcccccC
Confidence 6 5889999999994
No 26
>PRK10848 phosphohistidine phosphatase; Provisional
Probab=99.67 E-value=4.2e-16 Score=121.64 Aligned_cols=77 Identities=22% Similarity=0.348 Sum_probs=61.7
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcCCCC--eee
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEP--LAF 157 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~~~~--v~~ 157 (189)
|+|||||||++.++.. +.. ++|||++|++||+.+++++.. ..++.|||||+.||+|||+++++..+.+ +..
T Consensus 1 m~l~lvRHg~a~~~~~----~d~-~rpLt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~ 75 (159)
T PRK10848 1 MQVFIMRHGDAALDAA----SDS-VRPLTTCGCDESRLMANWLKGQKVDIERVLVSPYLRAEQTLEVVGECLNLPASAEV 75 (159)
T ss_pred CEEEEEeCCCCCCCCC----CCc-CCCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCHHHHHHHHHHHHHHhCCCCceEE
Confidence 5799999999988742 233 368999999999999999984 5689999999999999999998876644 334
Q ss_pred cCCccc
Q 029687 158 IDSLKE 163 (189)
Q Consensus 158 ~~~L~E 163 (189)
.+.|.+
T Consensus 76 ~~~l~~ 81 (159)
T PRK10848 76 LPELTP 81 (159)
T ss_pred ccCCCC
Confidence 444443
No 27
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=99.67 E-value=2.3e-16 Score=123.31 Aligned_cols=68 Identities=32% Similarity=0.424 Sum_probs=60.4
Q ss_pred CcEEEEEcCCCCCCCCCCcccCCCC-CCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCC
Q 029687 81 PKKVTLVRHGLSSWNDEGRVQGSSN-LSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD 152 (189)
Q Consensus 81 ~~~i~LiRHGet~~n~~~~~~g~~d-~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~ 152 (189)
|++|||+|||++.+...+ ..| ++|||++|++++..+|++|+ +..+|.|+|||+.||+|||+++.+.++
T Consensus 1 m~~L~LmRHgkA~~~~~~----~~D~dR~Lt~~G~~ea~~~a~~L~~~~~~~D~VL~Spa~Ra~QTae~v~~~~~ 71 (163)
T COG2062 1 MMRLYLMRHGKAEWAAPG----IADFDRPLTERGRKEAELVAAWLAGQGVEPDLVLVSPAVRARQTAEIVAEHLG 71 (163)
T ss_pred CceEEEeecccccccCCC----CCCccCcCCHHHHHHHHHHHHHHHhcCCCCCEEEeChhHHHHHHHHHHHHhhC
Confidence 589999999999987654 123 58999999999999999999 467899999999999999999999887
No 28
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=99.67 E-value=3.2e-16 Score=121.40 Aligned_cols=76 Identities=24% Similarity=0.375 Sum_probs=62.8
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc--CCCCEEEECchHHHHHHHHHHHhcCCCC--eee
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN--IYFDQCFSSPICRAKSTAEILWQGRDEP--LAF 157 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~--~~~~~I~sSpl~Ra~qTA~~l~~~~~~~--v~~ 157 (189)
|+|||||||++.++.. +..| +|||+.|++||+.++++|.+ ..++.|||||+.||+|||+.+++.++.+ +..
T Consensus 1 m~l~LvRHg~a~~~~~----~d~d-r~Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~ 75 (152)
T TIGR00249 1 MQLFIMRHGDAALDAA----SDSV-RPLTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSSAEV 75 (152)
T ss_pred CEEEEEeCCCcccccC----CCCC-CCcCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcceEE
Confidence 5799999999988764 3444 78999999999999999985 5789999999999999999999877643 444
Q ss_pred cCCcc
Q 029687 158 IDSLK 162 (189)
Q Consensus 158 ~~~L~ 162 (189)
.+.|.
T Consensus 76 ~~~l~ 80 (152)
T TIGR00249 76 LEGLT 80 (152)
T ss_pred ccCcC
Confidence 44444
No 29
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=99.66 E-value=5e-16 Score=125.20 Aligned_cols=87 Identities=20% Similarity=0.102 Sum_probs=68.3
Q ss_pred CCCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcC-CCCEEEECchHHHHHHHHHHHhcCCCCeee
Q 029687 79 SYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI-YFDQCFSSPICRAKSTAEILWQGRDEPLAF 157 (189)
Q Consensus 79 ~~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~-~~~~I~sSpl~Ra~qTA~~l~~~~~~~v~~ 157 (189)
...++||||||||+.....+ .+..|.+|||++|++||..+++++++. ..+.|||||+.||+|||++++. +.++.+
T Consensus 52 ~~~~~L~LiRHGet~~~~~~--~~~sD~RpLTerG~~qA~~lg~~L~~~~~~d~I~sSpa~Ra~qTAe~ia~--~~~v~~ 127 (201)
T PRK15416 52 KQHPVVVLFRHAERCDRSDN--QCLSDKTGITVKGTQDARELGKAFSADIPDYDLYSSNTVRTIQSATWFSA--GKKLTV 127 (201)
T ss_pred cCCCEEEEEeCccccCccCC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCCHHHHHHHHHHhc--CCCcEe
Confidence 35678999999998322111 112333789999999999999999853 3479999999999999999976 456888
Q ss_pred cCCcccccCCcc
Q 029687 158 IDSLKEAHLFFL 169 (189)
Q Consensus 158 ~~~L~E~~~G~~ 169 (189)
+++|+|.+.+.+
T Consensus 128 ~~~Lye~~~~~~ 139 (201)
T PRK15416 128 DKRLSDCGNGIY 139 (201)
T ss_pred cHHHhhcCchhH
Confidence 999999887754
No 30
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent Hi
Probab=99.64 E-value=6.6e-16 Score=117.20 Aligned_cols=77 Identities=43% Similarity=0.543 Sum_probs=66.4
Q ss_pred EEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhcC--CCCEEEECchHHHHHHHHHHHhcC--CCCeeec
Q 029687 83 KVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRNI--YFDQCFSSPICRAKSTAEILWQGR--DEPLAFI 158 (189)
Q Consensus 83 ~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~~--~~~~I~sSpl~Ra~qTA~~l~~~~--~~~v~~~ 158 (189)
+|||||||++.++..+...+..| .|||++|++||..+++.++.. .++.|||||+.||+|||+.+...+ +.++..+
T Consensus 1 ~i~liRHg~~~~~~~~~~~~~~d-~~Lt~~G~~qa~~l~~~l~~~~~~~~~v~sSp~~R~~~Ta~~~~~~~~~~~~~~~~ 79 (153)
T cd07040 1 VLYLVRHGEREPNAEGRFTGWGD-GPLTEKGRQQARELGKALRERYIKFDRIYSSPLKRAIQTAEIILEGLFEGLPVEVD 79 (153)
T ss_pred CEEEEeCCCCccccCCCccCCCC-CCcCHHHHHHHHHHHHHHHHhCCCCCEEEECChHHHHHHHHHHHHHhcCCCCeEEC
Confidence 37999999999988776667777 589999999999999999966 899999999999999999999876 5556555
Q ss_pred CC
Q 029687 159 DS 160 (189)
Q Consensus 159 ~~ 160 (189)
+.
T Consensus 80 ~~ 81 (153)
T cd07040 80 PR 81 (153)
T ss_pred HH
Confidence 44
No 31
>PRK06193 hypothetical protein; Provisional
Probab=99.64 E-value=2.2e-15 Score=122.10 Aligned_cols=74 Identities=26% Similarity=0.328 Sum_probs=64.2
Q ss_pred ccCCCcEEEEEcCCCCCCCCCCcccCCCC----CCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhc
Q 029687 77 LISYPKKVTLVRHGLSSWNDEGRVQGSSN----LSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQG 150 (189)
Q Consensus 77 ~~~~~~~i~LiRHGet~~n~~~~~~g~~d----~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~ 150 (189)
......+|||||||++++|..+.+.|+.| ++|||++|++||..++++++ +..++.|||||+.||+|||++++..
T Consensus 38 ~l~~~~~L~LvRHGet~~n~~~~~~gd~d~~~~~rpLt~~G~~qA~~l~~~L~~~~~~~d~V~sSpl~Ra~qTA~il~~~ 117 (206)
T PRK06193 38 SLQKGGYVIYFRHAATDRSQADQDTSDMDDCSTQRNLSEEGREQARAIGEAFRALAIPVGKVISSPYCRAWETAQLAFGR 117 (206)
T ss_pred HHhcCCEEEEEeCccCCCCccCCcccccccCcCCCCCCHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhcc
Confidence 34577899999999999888777777654 46899999999999999998 4679999999999999999998754
No 32
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.57 E-value=1e-14 Score=117.28 Aligned_cols=102 Identities=24% Similarity=0.228 Sum_probs=78.5
Q ss_pred CCcEEEEEcCCCCCCCCCCcccCCC----C--CCCCcHHHHHHHHHHHHHHh--cC--CCCEEEECchHHHHHHHHHHHh
Q 029687 80 YPKKVTLVRHGLSSWNDEGRVQGSS----N--LSVLTEAGVRQAERCRKALR--NI--YFDQCFSSPICRAKSTAEILWQ 149 (189)
Q Consensus 80 ~~~~i~LiRHGet~~n~~~~~~g~~----d--~~pLt~~G~~qA~~~~~~l~--~~--~~~~I~sSpl~Ra~qTA~~l~~ 149 (189)
..++||||||||..+|+.+.-.-.. | |+.||+.|++|+.++++.+. ++ .++.|++||++||+||+...++
T Consensus 13 r~KtiyLvRHgQg~HNV~g~~~h~ay~s~~~fD~~LTplG~~Qv~~l~~~~~A~qL~~~ieliv~SPMrRtLqT~v~~f~ 92 (248)
T KOG4754|consen 13 RCKTIYLVRHGQGIHNVAGEEDHKAYWSEDYFDPHLTPLGWKQVDNLRKHLMAKQLPNKIELIVVSPMRRTLQTMVIAFG 92 (248)
T ss_pred cceEEEEEeccccccccCcccchhhhhhhhccccccCHHHHHHHHHHhhhhhhhhcCCceeEEEechHHHHHHHHHHHhc
Confidence 5799999999999999875321111 1 47899999999999999886 34 4999999999999999998876
Q ss_pred cC-------CCCeeecCCc----ccccCCcc---CCCCHHHHHHHhH
Q 029687 150 GR-------DEPLAFIDSL----KEAHLFFL---EGMKNEIYGEQLG 182 (189)
Q Consensus 150 ~~-------~~~v~~~~~L----~E~~~G~~---eG~~~~ei~~~~p 182 (189)
.. ..++.+.+.+ +| ..|+| .+.+..++.+.||
T Consensus 93 ~~~~e~g~~~~p~~vsp~~i~~~rE-~lG~hpCD~r~~v~~~~~lfp 138 (248)
T KOG4754|consen 93 GYLAEDGEDPAPVKVSPPFIAVCRE-TLGDHPCDRRSSVTDLMKLFP 138 (248)
T ss_pred ceeccCCCcCCceeecchHHHHHHH-HhCCCcccccchhHHHHhhcc
Confidence 53 2467777877 66 24444 3667788888777
No 33
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism]
Probab=99.35 E-value=1.7e-12 Score=114.37 Aligned_cols=102 Identities=28% Similarity=0.272 Sum_probs=86.6
Q ss_pred CCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh-cCCCC-EEEECchHHHHHHHHHHHhcCCCCeee
Q 029687 80 YPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR-NIYFD-QCFSSPICRAKSTAEILWQGRDEPLAF 157 (189)
Q Consensus 80 ~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~-~~~~~-~I~sSpl~Ra~qTA~~l~~~~~~~v~~ 157 (189)
.+.+|||+|||++..|..++..|. ++|+++|.+-|+.+.+.+. ....+ .||||+..||+|||+.+... ..+..
T Consensus 238 ~pR~i~l~r~geS~~n~~griggd---s~ls~~g~~ya~~l~~f~~~~~~~dl~vwts~~~rti~ta~~l~~~--~~~~~ 312 (438)
T KOG0234|consen 238 TPRTIYLTRHGESEFNVEGRIGGD---SPLSERGSQYAKSLIKFVEEQSSSDLDVWTSQRKRTIQTAEGLKLD--YSVEQ 312 (438)
T ss_pred CCceEEEEecCCCccccccccCCc---ccccHHHHHHHHHHHHHHhhhcccCceeccchHHHHhhhHhhcCcc--hhhhh
Confidence 568999999999999999887644 4799999999999999987 33444 89999999999999944221 22577
Q ss_pred cCCcccccCCccCCCCHHHHHHHhHHHHH
Q 029687 158 IDSLKEAHLFFLEGMKNEIYGEQLGRLGR 186 (189)
Q Consensus 158 ~~~L~E~~~G~~eG~~~~ei~~~~p~~~~ 186 (189)
...|+|++.|.++|++.+||.+.||+.+.
T Consensus 313 ~~~Ldei~ag~~~g~t~eeI~~~~p~e~~ 341 (438)
T KOG0234|consen 313 WKALDEIDAGVCEGLTYEEIETNYPEEFA 341 (438)
T ss_pred HhhcCcccccccccccHHHHHHhCchhhh
Confidence 88999999999999999999999999875
No 34
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only]
Probab=99.07 E-value=1.6e-10 Score=93.55 Aligned_cols=78 Identities=32% Similarity=0.376 Sum_probs=62.4
Q ss_pred cCCCcEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHh--cCCCCEEEECchHHHHHHHHHHHhcCC--C
Q 029687 78 ISYPKKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALR--NIYFDQCFSSPICRAKSTAEILWQGRD--E 153 (189)
Q Consensus 78 ~~~~~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~--~~~~~~I~sSpl~Ra~qTA~~l~~~~~--~ 153 (189)
.+....|+||||||-... |..+ .||+.|++||+..|+.|+ ++.++.|+.|.+.||.+||.+|.++++ +
T Consensus 91 akatRhI~LiRHgeY~~~------g~~~--hLTelGReQAE~tGkRL~elglk~d~vv~StM~RA~ETadIIlk~l~d~l 162 (284)
T KOG4609|consen 91 AKATRHIFLIRHGEYHVD------GSLE--HLTELGREQAELTGKRLAELGLKFDKVVASTMVRATETADIILKHLPDDL 162 (284)
T ss_pred hhhhceEEEEeccceecc------Cchh--hcchhhHHHHHHHhHHHHHcCCchhhhhhhhhhhhHHHHHHHHHhCCCcc
Confidence 346789999999985322 2333 699999999999999999 689999999999999999999999875 2
Q ss_pred CeeecCCccc
Q 029687 154 PLAFIDSLKE 163 (189)
Q Consensus 154 ~v~~~~~L~E 163 (189)
...-.+.|+|
T Consensus 163 k~~s~~ll~E 172 (284)
T KOG4609|consen 163 KRVSCPLLRE 172 (284)
T ss_pred ceeccccccc
Confidence 3444455555
No 35
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=99.01 E-value=1.2e-09 Score=91.58 Aligned_cols=86 Identities=26% Similarity=0.271 Sum_probs=69.2
Q ss_pred CCcEEEEEcCCCCCCCCCCc------------------------------ccCCCCCCCCcHHHHHHHHHHHHHHh--cC
Q 029687 80 YPKKVTLVRHGLSSWNDEGR------------------------------VQGSSNLSVLTEAGVRQAERCRKALR--NI 127 (189)
Q Consensus 80 ~~~~i~LiRHGet~~n~~~~------------------------------~~g~~d~~pLt~~G~~qA~~~~~~l~--~~ 127 (189)
..+.|++|||||...+.-+. ..|...|+|||..|.-|++..|+.|. +.
T Consensus 11 ~~~~i~vmRHgERvD~if~~~W~~~~~~~~~~y~~~d~n~p~~l~qr~~~~~~y~~d~pit~~g~~~~~~~gr~l~~a~~ 90 (272)
T KOG3734|consen 11 VPRNIFVMRHGERVDNIFGKLWLKTCARPDGKYVPDDMNMPFRLPQRIRSPKGYPIDPPITVSGFIQCKLIGRELLNAGI 90 (272)
T ss_pred CCceEEEEEcccccccccchhhhhhhcCCCCCcCCCCccCCccccccccCcccCccCCCccchhHHHHHHHHHHHHhcCC
Confidence 56889999999976532211 11122357899999999999999887 68
Q ss_pred CCCEEEECchHHHHHHHHHHHhcCC----CCeeecCCccccc
Q 029687 128 YFDQCFSSPICRAKSTAEILWQGRD----EPLAFIDSLKEAH 165 (189)
Q Consensus 128 ~~~~I~sSpl~Ra~qTA~~l~~~~~----~~v~~~~~L~E~~ 165 (189)
.++.||+||..||+|||..+.+..+ ..+.++|.|-|..
T Consensus 91 ~i~~ifcSPs~r~VqTa~~i~~~~g~e~~~~i~vePgL~e~~ 132 (272)
T KOG3734|consen 91 AIDVIFCSPSLRCVQTAAKIKKGLGIEKKLKIRVEPGLFEPE 132 (272)
T ss_pred CcceeecCCchhHHHHHHHHHHhhchhcCeeEEecchhcchh
Confidence 8999999999999999999988776 5789999999864
No 36
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been
Probab=97.98 E-value=1.7e-05 Score=65.02 Aligned_cols=58 Identities=26% Similarity=0.131 Sum_probs=47.3
Q ss_pred cEEEEEcCCCCCCCCCCcccCCCCCCCCcHHHHHHHHHHHHHHhc-----C-------CCCEEEECchHHHHHHHHHHHh
Q 029687 82 KKVTLVRHGLSSWNDEGRVQGSSNLSVLTEAGVRQAERCRKALRN-----I-------YFDQCFSSPICRAKSTAEILWQ 149 (189)
Q Consensus 82 ~~i~LiRHGet~~n~~~~~~g~~d~~pLt~~G~~qA~~~~~~l~~-----~-------~~~~I~sSpl~Ra~qTA~~l~~ 149 (189)
+.++++|||+..- ..||+.|++|+..+|+.++. . ..-.|++|+..||+|||+.+..
T Consensus 4 ~v~~~~RHg~r~p------------~~LT~~G~~q~~~~G~~lr~~y~~~~~~~~~~~~~~~~~ss~~~Rt~~Sa~~~~~ 71 (242)
T cd07061 4 QVQVLSRHGDRYP------------GELTPFGRQQAFELGRYFRQRYGELLLLHSYNRSDLYIRSSDSQRTLQSAQAFLA 71 (242)
T ss_pred EEEEEEecCCCCc------------hhhhHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEEECCCcHHHHHHHHHHH
Confidence 4578999998632 25999999999999999972 1 1226899999999999999988
Q ss_pred cC
Q 029687 150 GR 151 (189)
Q Consensus 150 ~~ 151 (189)
++
T Consensus 72 gl 73 (242)
T cd07061 72 GL 73 (242)
T ss_pred hc
Confidence 75
No 37
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The relationship between the two branches is not evident by (PSI-)BLAST but is clear from more sensitive sequence searches and structural comparisons []. The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated. Acid phosphatases (3.1.3.2 from EC) are a heterogeneous group of proteins that hydrolyse phosphate esters, optimally at low pH. It has been shown [] that a number of acid phosphatases, from both prokaryotes and eukaryotes, share two regions of sequence similarity, each centred around a conserved histidine residue. These two histidines seem to be involved in the enzymes' catalytic mechanism [, ]. The first histidine is located in the N-terminal section and forms a phosphohistidine intermediate while the second is located in the C-terminal section and possibly acts as proton donor. Enzymes belonging to this family are called 'histidine acid phosphatases' and include: Escherichia coli pH 2.5 acid phosphatase (gene appA). E. coli glucose-1-phosphatase (3.1.3.10 from EC) (gene agp). Yeast constitutive and repressible acid phosphatases (genes PHO3 and PHO5). Schizosaccharomyces pombe acid phosphatase (gene pho1). Aspergillus awamori phytases A and B (3.1.3.8 from EC) (gene phyA and phyB). Mammalian lysosomal and prostatic acid phosphatase. Several Caenorhabditis elegans hypothetical proteins. ; GO: 0003993 acid phosphatase activity; PDB: 1DKN_A 1DKQ_A 1DKL_B 1DKP_A 1DKM_A 1DKO_A 2GFI_B 3IT1_B 3IT0_B 3IT3_B ....
Probab=96.95 E-value=0.0012 Score=55.86 Aligned_cols=44 Identities=27% Similarity=0.210 Sum_probs=36.7
Q ss_pred CCcHHHHHHHHHHHHHHhc----C-------CCCEEEECchHHHHHHHHHHHhcC
Q 029687 108 VLTEAGVRQAERCRKALRN----I-------YFDQCFSSPICRAKSTAEILWQGR 151 (189)
Q Consensus 108 pLt~~G~~qA~~~~~~l~~----~-------~~~~I~sSpl~Ra~qTA~~l~~~~ 151 (189)
.||+.|.+|...+|++++. + .--.|++|...||++||+.+..++
T Consensus 62 ~LT~~G~~q~~~lG~~lr~~Y~~l~~~~~~~~~v~vrSt~~~Rt~~Sa~af~~Gl 116 (347)
T PF00328_consen 62 QLTPRGMEQHYQLGKRLRERYPGLFPDNYNPEQVYVRSTNKQRTIQSAQAFLQGL 116 (347)
T ss_dssp SBTHHHHHHHHHHHHHHHHHHHTSSTSSS-TTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHHHHHHHHHhccccccccceeEEEeccchHHHHHHHHHHHH
Confidence 5999999999999999982 1 122588999999999999987654
No 38
>PRK10172 phosphoanhydride phosphorylase; Provisional
Probab=96.24 E-value=0.034 Score=50.14 Aligned_cols=45 Identities=18% Similarity=0.110 Sum_probs=35.2
Q ss_pred CCCcHHHHHHHHHHHHHHhc------C-------CCC--EEEECchHHHHHHHHHHHhcC
Q 029687 107 SVLTEAGVRQAERCRKALRN------I-------YFD--QCFSSPICRAKSTAEILWQGR 151 (189)
Q Consensus 107 ~pLt~~G~~qA~~~~~~l~~------~-------~~~--~I~sSpl~Ra~qTA~~l~~~~ 151 (189)
..||++|..|...+|++++. + ..+ .|++++..||+.||+.+..++
T Consensus 71 GqLT~~G~~~~~~lG~~lR~rY~~~~lL~~~~c~~~~~v~v~a~~~~RTi~SAqafl~Gl 130 (436)
T PRK10172 71 GWLTPRGGELVTLLGHYQRQRLVADGLLAAKGCPQPGQVAAIADVDQRTRKTGEAFLAGL 130 (436)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEeCCchHHHHHHHHHHHhc
Confidence 35999999999999998862 1 122 577888899999999886654
No 39
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional
Probab=96.00 E-value=0.055 Score=48.50 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=46.6
Q ss_pred cEEEEEcCCCCCCCC-C---------CcccCCC-CCCCCcHHHHHHHHHHHHHHhc------C-------CC--CEEEEC
Q 029687 82 KKVTLVRHGLSSWND-E---------GRVQGSS-NLSVLTEAGVRQAERCRKALRN------I-------YF--DQCFSS 135 (189)
Q Consensus 82 ~~i~LiRHGet~~n~-~---------~~~~g~~-d~~pLt~~G~~qA~~~~~~l~~------~-------~~--~~I~sS 135 (189)
+.++|-|||--.--. . ..+.-|. ....||.+|..+...+|++++. + .. -.|+++
T Consensus 33 ~vvilsRHg~R~P~~~~~~~l~~~t~~~Wp~w~~~~G~LT~~G~~~~~~~G~~~r~~~~~~~ll~~~~cp~~~~v~~~a~ 112 (413)
T PRK10173 33 QVLMMSRHNLRAPLANNGSVLEQSTPNAWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAQQGLVKSGECPPPDTVYAYAN 112 (413)
T ss_pred EEEEEeecccCCCCCCcchhhhhcCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcCeEEEEeC
Confidence 668899999522111 1 1111121 1245999999999999997762 1 11 258899
Q ss_pred chHHHHHHHHHHHhcC
Q 029687 136 PICRAKSTAEILWQGR 151 (189)
Q Consensus 136 pl~Ra~qTA~~l~~~~ 151 (189)
+..||++||+.+..++
T Consensus 113 ~~~RT~~Sa~afl~Gl 128 (413)
T PRK10173 113 SLQRTVATAQFFITGA 128 (413)
T ss_pred CchHHHHHHHHHHHhc
Confidence 9999999999887654
No 40
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism]
Probab=95.89 E-value=0.03 Score=50.08 Aligned_cols=44 Identities=23% Similarity=0.182 Sum_probs=36.5
Q ss_pred CCcHHHHHHHHHHHHHHhc---C---------CCC--EEEECchHHHHHHHHHHHhcC
Q 029687 108 VLTEAGVRQAERCRKALRN---I---------YFD--QCFSSPICRAKSTAEILWQGR 151 (189)
Q Consensus 108 pLt~~G~~qA~~~~~~l~~---~---------~~~--~I~sSpl~Ra~qTA~~l~~~~ 151 (189)
.||+.|.+|+..+|++|++ . ... .|.||+..||+.||+.+..++
T Consensus 70 qLT~~G~~Q~~~LG~~LR~rYvr~~~fL~~~y~~~ev~iRStd~nRtl~SAqs~laGl 127 (411)
T KOG3720|consen 70 QLTDRGMEQMFELGRFLRKRYVRYGNFLSPKYNPKEVYIRSTDVNRTLMSAQSVLAGL 127 (411)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhccccCCcccCcceEEEecCCccHHHHHHHHHHHhh
Confidence 5999999999999999984 1 111 477999999999999887654
No 41
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton]
Probab=89.56 E-value=0.41 Score=45.87 Aligned_cols=44 Identities=30% Similarity=0.202 Sum_probs=37.5
Q ss_pred CCcHHHHHHHHHHHHHHhcC-----------------CCCEEEECchHHHHHHHHHHHhcC
Q 029687 108 VLTEAGVRQAERCRKALRNI-----------------YFDQCFSSPICRAKSTAEILWQGR 151 (189)
Q Consensus 108 pLt~~G~~qA~~~~~~l~~~-----------------~~~~I~sSpl~Ra~qTA~~l~~~~ 151 (189)
.||..|+-||..+|+.++.. .--.||+|+..|-+-||+++++++
T Consensus 511 elT~agr~QAeeLGr~FR~~~~gg~g~gllrLhst~rhDlKIYaSdEgRVqmtAaaFAkgL 571 (1018)
T KOG1057|consen 511 ELTHAGRYQAEELGRQFRCDYPGGQGLGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGL 571 (1018)
T ss_pred EecchhHhhHHHHHHHHHhcCCCCCCcceeeehhhhhccceeEecCcchHHHHHHHHHHHH
Confidence 59999999999999999832 112599999999999999998864
No 42
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only]
Probab=79.56 E-value=3.5 Score=37.43 Aligned_cols=44 Identities=16% Similarity=0.104 Sum_probs=35.8
Q ss_pred CCcHHHHHHHHHHHHHHhc-------CCCCEEEECchHHHHHHHHHHHhcC
Q 029687 108 VLTEAGVRQAERCRKALRN-------IYFDQCFSSPICRAKSTAEILWQGR 151 (189)
Q Consensus 108 pLt~~G~~qA~~~~~~l~~-------~~~~~I~sSpl~Ra~qTA~~l~~~~ 151 (189)
.|...|+..|.++++.+-. ...-.|+++-..||.+||+.++.++
T Consensus 132 ~l~~~g~~~a~R~~r~f~~~y~~~~n~~~y~i~tt~~~R~~dSA~~F~~GL 182 (467)
T KOG1382|consen 132 QLEDEGRMLAKRLARRFPALYYELENPTVYNINTTASQRVVDSAQAFAYGL 182 (467)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcCCceEEeeccchHHHHHHHHHHHhhh
Confidence 4888999999999987752 2233589999999999999998776
No 43
>KOG3672 consensus Histidine acid phosphatase [General function prediction only]
Probab=72.34 E-value=13 Score=33.30 Aligned_cols=41 Identities=22% Similarity=0.124 Sum_probs=32.7
Q ss_pred CCcHHHHHHHHHHHHHHhc--------C-------CCCEEEECchHHHHHHHHHHH
Q 029687 108 VLTEAGVRQAERCRKALRN--------I-------YFDQCFSSPICRAKSTAEILW 148 (189)
Q Consensus 108 pLt~~G~~qA~~~~~~l~~--------~-------~~~~I~sSpl~Ra~qTA~~l~ 148 (189)
.||.+|..|-..+|+.+.. . .-..|+|+-+.||.|+|-.+.
T Consensus 168 ~LT~~G~~QhL~~G~~~r~~Y~k~~lk~~pN~~sv~~lyv~TT~y~RT~QSaLA~l 223 (487)
T KOG3672|consen 168 MLTAEGALQHLRLGKYFRHRYEKTKLKADPNQRSVADLYVVTTKYNRTVQSALAFL 223 (487)
T ss_pred ceeHHhHHHHHhhhHHHHHHHhhccccCCccccccceeEEEeccccHHHHHHHHHH
Confidence 4999999999999998862 1 112499999999999997763
Done!