Query 029690
Match_columns 189
No_of_seqs 176 out of 1455
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 18:28:00 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/029690.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2309-2313//hhsearch_pdb/029690hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3y_A Epididymal secretory gl 1.0 1 1 159.8 13.9 110 64-175 30-151 (215)
2 2f8a_A Glutathione peroxidase 1.0 1 1 157.4 14.1 111 64-175 21-143 (208)
3 3dwv_A Glutathione peroxidase- 1.0 1 1 156.7 8.8 113 63-175 20-137 (187)
4 2r37_A Glutathione peroxidase 1.0 1 1 155.8 13.9 109 65-175 13-133 (207)
5 3kij_A Probable glutathione pe 1.0 1 1 155.5 13.9 111 63-174 12-128 (180)
6 2p31_A CL683, glutathione pero 1.0 1 1 152.7 12.8 125 61-186 21-159 (181)
7 2gs3_A PHGPX, GPX-4, phospholi 1.0 1 1 150.5 14.9 113 61-174 21-138 (185)
8 4g2e_A Peroxiredoxin; redox pr 1.0 1 1 149.4 5.4 92 63-163 4-96 (157)
9 2obi_A PHGPX, GPX-4, phospholi 1.0 1 1 148.7 14.7 112 62-174 20-136 (183)
10 2p5q_A Glutathione peroxidase 1.0 1 1 146.9 12.6 110 63-172 6-120 (170)
No 1
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=159.84 Aligned_cols=110 Identities=39% Similarity=0.684 Sum_probs=100.4
Q ss_pred CCCCCCCCEEEECCC-CCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf 379821481886799-9956468669988999986378946489799999999986029809999846999999999988
Q 029690 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (189)
Q Consensus 64 ~~g~~~p~f~l~d~~-g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~~ 142 (189)
.....+|+|++.|.+ |+.+++++++||++||+||++|||+|+ +++.|++++++|+++|++|++|++|.++.+++++.+
T Consensus 30 ~~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~ 108 (215)
T 2i3y_A 30 DEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNK 108 (215)
T ss_dssp CCCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHH
T ss_pred CCCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEECCCCCCHH-HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 2258767867663799978719993998899999678897757-699999999984549869999975324767889999
Q ss_pred HHHHHHHH------HCCCCCCEECCCC-----CHHHHHHHHHCC
Q ss_conf 99999976------3796432011653-----059999988507
Q 029690 143 QIQEFACT------RFKAEFPIFDKVL-----ALQLYKFYKQKI 175 (189)
Q Consensus 143 ~~~~~~~~------~~~~~fp~~~D~~-----~~~~~~~l~~~~ 175 (189)
++++|+ + +++++||++.|.+ .+++|.+++...
T Consensus 109 ~i~~f~-~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~ 151 (215)
T 2i3y_A 109 EILPGL-KYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSC 151 (215)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS
T ss_pred HHHHHH-HHCCCHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHC
T ss_conf 999999-8413021168653357663368855205799988507
No 2
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=1.00 E-value=1 Score=157.38 Aligned_cols=111 Identities=41% Similarity=0.653 Sum_probs=100.4
Q ss_pred CCCCCCCCEEEECCC-CCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf 379821481886799-9956468669988999986378946489799999999986029809999846999999999988
Q 029690 64 QSKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (189)
Q Consensus 64 ~~g~~~p~f~l~d~~-g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~~ 142 (189)
..+..+|+|++.+.+ |+.+++++++||++||+||++|||+|+.++|.|++++++|+++|+.|++|++|.++.+++++.+
T Consensus 21 ~~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~ 100 (208)
T 2f8a_A 21 QSMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNE 100 (208)
T ss_dssp -CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHH
T ss_pred HHCCCCCCEEEEECCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 10476476386627899790699939998999998789946788899999999971679869999988745656889989
Q ss_pred HHHHHHHH------HCCCCCCEECCCC-----CHHHHHHHHHCC
Q ss_conf 99999976------3796432011653-----059999988507
Q 029690 143 QIQEFACT------RFKAEFPIFDKVL-----ALQLYKFYKQKI 175 (189)
Q Consensus 143 ~~~~~~~~------~~~~~fp~~~D~~-----~~~~~~~l~~~~ 175 (189)
++++|+ + +++++||++.|.+ ..++|.+++...
T Consensus 101 ~i~~f~-~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~ 143 (208)
T 2f8a_A 101 EILNSL-KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREAL 143 (208)
T ss_dssp HHHHHH-HHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHS
T ss_pred HHHHHH-HHCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCC
T ss_conf 999998-7403233566323887776047987547999998418
No 3
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=1.00 E-value=1 Score=156.67 Aligned_cols=113 Identities=50% Similarity=0.871 Sum_probs=102.0
Q ss_pred CCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf 13798214818867999956468669988999986378946489799999999986029809999846999999999988
Q 029690 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (189)
Q Consensus 63 ~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~~ 142 (189)
...+.++|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++|+++++|++|.++.+++++.+
T Consensus 20 ~~~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~ 99 (187)
T 3dwv_A 20 MSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEE 99 (187)
T ss_dssp CTTCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTT
T ss_pred HCCCCCCCCEEEECCCCCEEEHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHH
T ss_conf 35877658758886899995189908988999995688987288899999999986208869999988655778999999
Q ss_pred HHHHHHHHHCCCCCCEECCCC-----CHHHHHHHHHCC
Q ss_conf 999999763796432011653-----059999988507
Q 029690 143 QIQEFACTRFKAEFPIFDKVL-----ALQLYKFYKQKI 175 (189)
Q Consensus 143 ~~~~~~~~~~~~~fp~~~D~~-----~~~~~~~l~~~~ 175 (189)
++++|+.++++++||++.|.+ ..++|++++...
T Consensus 100 ~~~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~ 137 (187)
T 3dwv_A 100 EIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTK 137 (187)
T ss_dssp HHHHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHS
T ss_pred HHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 99999985249987402003567743368999987516
No 4
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=1.00 E-value=1 Score=155.77 Aligned_cols=109 Identities=37% Similarity=0.626 Sum_probs=99.2
Q ss_pred CCCCCCCEEEECCC-CCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHH
Q ss_conf 79821481886799-99564686699889999863789464897999999999860298099998469999999999889
Q 029690 65 SKTSVHDFSVKDAK-GQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQ 143 (189)
Q Consensus 65 ~g~~~p~f~l~d~~-g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~~~ 143 (189)
....+|+|++.|.+ |+.+++++++||++||+||++|||+| .++|.|++++++|+++|++||+|++|.++.+++++.++
T Consensus 13 ~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~ 91 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSE 91 (207)
T ss_dssp --CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHH
T ss_pred CCCCCCCEEEEECCCCCEECHHHHCCCEEEEEEECCCCCCH-HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHH
T ss_conf 45766770756379997874999389889999967889874-77999999999843498799999775457679999999
Q ss_pred HHHHHHH------HCCCCCCEECCCC-----CHHHHHHHHHCC
Q ss_conf 9999976------3796432011653-----059999988507
Q 029690 144 IQEFACT------RFKAEFPIFDKVL-----ALQLYKFYKQKI 175 (189)
Q Consensus 144 ~~~~~~~------~~~~~fp~~~D~~-----~~~~~~~l~~~~ 175 (189)
+++|+ + +++++||++.|.+ .+++|.++....
T Consensus 92 i~~f~-~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~ 133 (207)
T 2r37_A 92 ILPTL-KYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSC 133 (207)
T ss_dssp HHHHH-HHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHS
T ss_pred HHHHH-HHCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHC
T ss_conf 99999-7424010368665246674368856325899998547
No 5
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=1.00 E-value=1 Score=155.52 Aligned_cols=111 Identities=41% Similarity=0.759 Sum_probs=101.1
Q ss_pred CCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf 13798214818867999956468669988999986378946489799999999986029809999846999999999988
Q 029690 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (189)
Q Consensus 63 ~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~~ 142 (189)
..+|..+|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++|+.+++|++|.++.+++++++
T Consensus 12 ~~~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~ 91 (180)
T 3kij_A 12 KPKINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSK 91 (180)
T ss_dssp CCCCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHH
T ss_pred CCCCCCCCCEEEECCCCCEECHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 57767635248866899995089939988999998068987488999999999984518869999877745667999999
Q ss_pred HHHHHHHHH-CCCCCCEECCCC-----CHHHHHHHHHC
Q ss_conf 999999763-796432011653-----05999998850
Q 029690 143 QIQEFACTR-FKAEFPIFDKVL-----ALQLYKFYKQK 174 (189)
Q Consensus 143 ~~~~~~~~~-~~~~fp~~~D~~-----~~~~~~~l~~~ 174 (189)
++++|+ ++ ++++||++.+.+ ..+++.++...
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 128 (180)
T 3kij_A 92 EVESFA-RKNYGVTFPIFHKIKILGSEGEPAFRFLVDS 128 (180)
T ss_dssp HHHHHH-HHHHCCCSCBBCCCCCSSTTCCHHHHHHHHH
T ss_pred HHHHHH-HHHCCCCCCEEEEEECCCCCCCHHHHHHHHC
T ss_conf 999999-8743999721335641686520789998751
No 6
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=152.72 Aligned_cols=125 Identities=37% Similarity=0.667 Sum_probs=104.4
Q ss_pred HCCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 00137982148188679999564686699889999863789464897999999999860298099998469999999999
Q 029690 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (189)
Q Consensus 61 ~~~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~ 140 (189)
...++|+.+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++|+++++.+++|++|.++.+++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~ 100 (181)
T 2p31_A 21 QSMQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDS 100 (181)
T ss_dssp ------CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSC
T ss_pred CCCCCCCCCCCEEEECCCCCEECHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
T ss_conf 76886775476476658999953799099889999953679886889999999999851288799999876778888899
Q ss_pred HHHHHHHHHHH-CCCCCCEECCCC-----CHHHHHHHHHCCC--------CCCCCCCCEE
Q ss_conf 88999999763-796432011653-----0599999885079--------9820124327
Q 029690 141 NEQIQEFACTR-FKAEFPIFDKVL-----ALQLYKFYKQKIH--------SHGFAYACRI 186 (189)
Q Consensus 141 ~~~~~~~~~~~-~~~~fp~~~D~~-----~~~~~~~l~~~~~--------~~g~~~~~~~ 186 (189)
.+++++|+ ++ ++++||++.|.+ ..++|.++....+ ..-+|..+++
T Consensus 101 ~~~~~~~~-~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i 159 (181)
T 2p31_A 101 NKEIESFA-RRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV 159 (181)
T ss_dssp HHHHHHHH-HHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE
T ss_pred HHHHHHHH-HHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCE
T ss_conf 99999999-860499954576304678550465534342699864543169999699989
No 7
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=150.45 Aligned_cols=113 Identities=47% Similarity=0.799 Sum_probs=101.1
Q ss_pred HCCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 00137982148188679999564686699889999863789464897999999999860298099998469999999999
Q 029690 61 MASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGD 140 (189)
Q Consensus 61 ~~~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~ 140 (189)
....+|+.+|+|++.|.+|+.+++++++||++||+||++|||+|+.+++.|++++++|+++|+++++|++|.++.+++++
T Consensus 21 ~~~~~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~ 100 (185)
T 2gs3_A 21 QSMRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGS 100 (185)
T ss_dssp GGGGGCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSC
T ss_pred HHCCCCCCCCCCEEECCCCCEEEHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
T ss_conf 23167887677266768999965899699889999845889860889999999999865288499999886557779999
Q ss_pred HHHHHHHHHHHCCCCCCEECCC--C---CHHHHHHHHHC
Q ss_conf 8899999976379643201165--3---05999998850
Q 029690 141 NEQIQEFACTRFKAEFPIFDKV--L---ALQLYKFYKQK 174 (189)
Q Consensus 141 ~~~~~~~~~~~~~~~fp~~~D~--~---~~~~~~~l~~~ 174 (189)
++++++|+ ++++++||++.|. + ..++|+++...
T Consensus 101 ~~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~ 138 (185)
T 2gs3_A 101 NEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQ 138 (185)
T ss_dssp HHHHHHHH-HHTTCCSEEBCCCBSSSTTBCHHHHHHTTS
T ss_pred HHHHHHHH-HHCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 99999999-983999704642035871145899998754
No 8
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=1.00 E-value=1 Score=149.43 Aligned_cols=92 Identities=17% Similarity=0.244 Sum_probs=87.7
Q ss_pred CCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEE-CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCH
Q ss_conf 13798214818867999956468669988999986-37894648979999999998602980999984699999999998
Q 029690 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNV-ASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (189)
Q Consensus 63 ~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~-a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~ 141 (189)
.++|+.+|+|++.|.+|+.+++++++||++||+|| ++|||+|+.+++.+++++++++++++.+++||.| ++
T Consensus 4 l~vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~~ 75 (157)
T 4g2e_A 4 VEIGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------PP 75 (157)
T ss_dssp CCTTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------CH
T ss_pred CCCCCCCCCEEEECCCCCEEEHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCC--------CH
T ss_conf 8899998671968899989819998999499985577777854510010000000012357258654164--------13
Q ss_pred HHHHHHHHHHCCCCCCEECCCC
Q ss_conf 8999999763796432011653
Q 029690 142 EQIQEFACTRFKAEFPIFDKVL 163 (189)
Q Consensus 142 ~~~~~~~~~~~~~~fp~~~D~~ 163 (189)
+.+++|+ ++++++||++.|.+
T Consensus 76 ~~~~~~~-~~~~~~~p~l~D~~ 96 (157)
T 4g2e_A 76 FSNKAFK-EHNKLNFTILSDYN 96 (157)
T ss_dssp HHHHHHH-HHTTCCSEEEECTT
T ss_pred HHHHHHH-HHCCCCEEEEECCC
T ss_conf 5799999-97199578998697
No 9
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=1.00 E-value=1 Score=148.68 Aligned_cols=112 Identities=48% Similarity=0.823 Sum_probs=101.3
Q ss_pred CCCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCH
Q ss_conf 01379821481886799995646866998899998637894648979999999998602980999984699999999998
Q 029690 62 ASQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDN 141 (189)
Q Consensus 62 ~~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~ 141 (189)
..++|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.+++|++|.++.++++++
T Consensus 20 ~~~~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~ 99 (183)
T 2obi_A 20 DWRCARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSN 99 (183)
T ss_dssp CGGGCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCH
T ss_pred CCCCCCCCCCEEEECCCCCEEEHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCH
T ss_conf 87556734663778689999668981998899999677798858899999999999752895999998887787898999
Q ss_pred HHHHHHHHHHCCCCCCEEC--CCC---CHHHHHHHHHC
Q ss_conf 8999999763796432011--653---05999998850
Q 029690 142 EQIQEFACTRFKAEFPIFD--KVL---ALQLYKFYKQK 174 (189)
Q Consensus 142 ~~~~~~~~~~~~~~fp~~~--D~~---~~~~~~~l~~~ 174 (189)
+++++|+ ++++++||++. |.+ ..++|+++...
T Consensus 100 ~~~~~~~-~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~ 136 (183)
T 2obi_A 100 EEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQ 136 (183)
T ss_dssp HHHHHHH-HTTTCCSEEBCCCCCSSTTSCHHHHHHHTS
T ss_pred HHHHHHH-HHCCCCCEEEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999-980998657765226884333799986315
No 10
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=1.00 E-value=1 Score=146.87 Aligned_cols=110 Identities=72% Similarity=1.201 Sum_probs=98.9
Q ss_pred CCCCCCCCCEEEECCCCCEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
Q ss_conf 13798214818867999956468669988999986378946489799999999986029809999846999999999988
Q 029690 63 SQSKTSVHDFSVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNE 142 (189)
Q Consensus 63 ~~~g~~~p~f~l~d~~g~~~~l~~~~gk~vli~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vi~is~d~~~~~e~~~~~ 142 (189)
.++|..+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|++++++|+++++.+++|++|.++.+++++.+
T Consensus 6 ~~~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 85 (170)
T 2p5q_A 6 SKNPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTND 85 (170)
T ss_dssp ----CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHH
T ss_pred CCCCCCCCCEEEECCCCCEECHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 77786425338874899893479929987999997326886377799999999983429879999987877777889999
Q ss_pred HHHHHHHHHCCCCCCEE--CCCC---CHHHHHHHH
Q ss_conf 99999976379643201--1653---059999988
Q 029690 143 QIQEFACTRFKAEFPIF--DKVL---ALQLYKFYK 172 (189)
Q Consensus 143 ~~~~~~~~~~~~~fp~~--~D~~---~~~~~~~l~ 172 (189)
.+++|+.++++++||++ .|.+ ..++|+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~ 120 (170)
T 2p5q_A 86 QITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLK 120 (170)
T ss_dssp HHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 99999997368886047650357876379999998
Done!