BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029701
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XJ35|CLPR1_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 1,
chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1
Length = 387
Score = 277 bits (709), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/189 (70%), Positives = 158/189 (83%), Gaps = 2/189 (1%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
MWLD+DN +KPIYLYINS GTQNEK E+VG+ET+AYAIAD ++YCKS VYT+NCGMA+GQ
Sbjct: 201 MWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQ 260
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AAMLLS+G KGYR +QP+SSTKLYLP V RSSG DMW KAK+L+AN E YIELLAKGT
Sbjct: 261 AAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGT 320
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEKRDYDMMLAQQMSMEREAGG 180
GK KE+I +DI+RPKY+QA+ AI YG+ADKI DSQD+++EKRDYD LAQ+ R GG
Sbjct: 321 GKSKEQINEDIKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQRAM--RPGGG 378
Query: 181 PQAAPSGFR 189
AAP+G R
Sbjct: 379 SPAAPAGLR 387
>sp|Q9L4P4|CLPR_SYNE7 Putative ATP-dependent Clp protease proteolytic subunit-like
OS=Synechococcus elongatus (strain PCC 7942) GN=clpR
PE=3 SV=1
Length = 228
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+FDN KPIY YINS+GT +++G ET+A+AI D M Y K V+T+ G A G
Sbjct: 64 LYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGT 123
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AAM+LS G G R P+++ L P G + G +D+ +AK++ AN + +E+ A+ T
Sbjct: 124 AAMILSGGTPGNRASLPHATIVLNQPRTG-AQGQASDIQIRAKEVLANKRTMLEIFARNT 182
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+ + +A+D R YM +A+ YGL D+++DS+
Sbjct: 183 GQDPDRLARDTDRMLYMTPAQAVEYGLIDRVLDSR 217
>sp|P74466|CLPR_SYNY3 Putative ATP-dependent Clp protease proteolytic subunit-like
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=clpR
PE=3 SV=1
Length = 225
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L FD+ KPIY YINS+GT ++VG ET+A+AI D + Y K V+T+ G A G
Sbjct: 62 LYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGT 121
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AAM+LS G KGYR P+++ L G + G TD+ +AK++ +N ++ +E+L+ T
Sbjct: 122 AAMILSSGTKGYRASLPHATIVLNQNRTG-AQGQATDIQIRAKEVISNKQTMLEILSLNT 180
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154
G+ +E++AKD+ R Y+ +A YGL D++++S
Sbjct: 181 GQTQEKLAKDMDRTFYLTPAQAKEYGLIDRVLES 214
>sp|Q8LB10|CLPR4_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 4,
chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1
Length = 305
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L +++ KPIYLYINS+GT + E +G +T+A+AI D M Y K ++T+ G A+G+
Sbjct: 135 LYLQYEDEEKPIYLYINSTGT-TKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGE 193
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AA+LL+ GAKG R P+S+ + P + R G TD+ K+++ ++L +K
Sbjct: 194 AALLLTAGAKGNRSALPSSTIMIKQP-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHI 252
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
GK E+I D++RPKY EA+ YG+ DK++
Sbjct: 253 GKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284
>sp|Q8L770|CLPR3_ARATH ATP-dependent Clp protease proteolytic subunit-related protein 3,
chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1
Length = 330
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 99/154 (64%), Gaps = 3/154 (1%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
M+L + + +PIY+YINS+GT + E+VG E++ +AI D++ K++V+TV G A GQ
Sbjct: 151 MYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQ 210
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSG--PVTDMWRKAKDLEANAESYIELLAK 118
A +LLS G KG R + P++ + P V SSG P +D+ +AK++ N + +ELL+K
Sbjct: 211 ACLLLSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSK 269
Query: 119 GTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
TG E +A ++RP YM A +A +G+ D+I+
Sbjct: 270 HTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 303
>sp|Q7N0L3|CLPP_PHOLL ATP-dependent Clp protease proteolytic subunit OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=clpP PE=3
SV=1
Length = 207
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ A+++ EL+AK T
Sbjct: 113 GAFLLTAGAKGKRICLPNSRVMIHQPL-GGFQGQATDIEIHAQEILKVKSRMNELMAKHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
G+P EEIAKD +R +++ A EA+ YGL DKI +D
Sbjct: 172 GRPIEEIAKDTERDRFLSADEAVEYGLVDKIFTHRD 207
>sp|Q7NEW1|CLPP2_GLOVI ATP-dependent Clp protease proteolytic subunit 2 OS=Gloeobacter
violaceus (strain PCC 7421) GN=clpP2 PE=3 SV=1
Length = 218
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 90/153 (58%), Gaps = 8/153 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ +KPI +YINS G G ET A+A+ D M + + + T+ G+A G
Sbjct: 58 LYLESEDNAKPIEIYINSPGV-------AGFETSAFAVYDTMRHVRMPIKTICLGLAGGF 110
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
+A+L++ G KG R PNS LY P G + G TD+ +A++L + +LL+ T
Sbjct: 111 SALLMAAGTKGQRMSLPNSRIILYQPY-GGARGQATDINIRAQELLTTKRTLNQLLSIHT 169
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153
GK E+I KD +R YM +EA+ YGL DK+++
Sbjct: 170 GKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLE 202
>sp|Q60107|CLPP_YEREN ATP-dependent Clp protease proteolytic subunit OS=Yersinia
enterocolitica GN=clpP PE=3 SV=1
Length = 207
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+AK T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAKHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A EA+ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSADEAVEYGLVDSVFTRRD 207
>sp|A1JNN2|CLPP_YERE8 ATP-dependent Clp protease proteolytic subunit OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=clpP PE=3 SV=1
Length = 207
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+AK T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAKHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A EA+ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSADEAVEYGLVDSVFTRRD 207
>sp|Q7VAR9|CLPP2_PROMA ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=clpP2 PE=3
SV=1
Length = 200
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD ++++KPIYLYINS G G+ T AI D M Y KS V T+ G+A
Sbjct: 52 LYLDSEDSTKPIYLYINSPG---------GSVTAGLAIYDTMKYVKSDVVTICVGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS G K R P+S ++ P+ G S +D+ +AK++ + +A+ T
Sbjct: 103 GAFLLSAGTKNKRLALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAA 158
G+P E+I KD R ++ AKEA YGL DK+I + A
Sbjct: 163 GQPFEKIEKDTDRDYFLSAKEAKDYGLIDKVISHPNEA 200
>sp|O67357|CLPP_AQUAE ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus
(strain VF5) GN=clpP PE=3 SV=1
Length = 201
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ + K IYLYINS G G+ T AI D M Y K V T+ G A
Sbjct: 56 LFLESQDPDKDIYLYINSPG---------GSVTAGLAIYDTMQYIKPDVVTICMGQAASM 106
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A+LL+ GA G R P+S ++ P+ G G TD+ A++++ E I++LAK T
Sbjct: 107 GAILLAAGAPGKRYALPHSRIMIHQPL-GGIQGQATDIIIHAEEIKRIKEMLIDILAKHT 165
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
G+PK++IA DI+R +M EA YGL DK+I+ ++
Sbjct: 166 GQPKDKIANDIERDYFMSPYEAKDYGLIDKVIEKRE 201
>sp|P74467|CLPP3_SYNY3 Probable ATP-dependent Clp protease proteolytic subunit 3
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=clpP3
PE=3 SV=1
Length = 202
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 9/154 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD D+ SKPIYLYINS G G+ T AI D M Y K++V T+ G+A
Sbjct: 52 LYLDSDDPSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKAEVITICVGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GA G R P++ ++ P+ G TD+ +A+++ + E++A+ T
Sbjct: 103 GAFLLASGAPGKRLALPHARIMIHQPMGGTGRRQATDIDIEAREILRIRQQLNEIMAQRT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154
G+ E+IAKD R ++ A EA YGL DK+I++
Sbjct: 163 GQTVEKIAKDTDRDYFLSAAEAKEYGLIDKVIEN 196
>sp|Q5FL55|CLPP_LACAC ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM)
GN=clpP PE=3 SV=1
Length = 195
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD + +K I LYINS G G T AI D M + KS V T+ GMA
Sbjct: 48 LFLDAQDNTKDISLYINSPG---------GVITSGLAIMDTMNFIKSDVSTIAIGMAASM 98
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A++LL+ G KG R PNS+ ++ P+ G + G TD+ A ++ + + E+L + T
Sbjct: 99 ASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIAANEILKSRKKINEILHETT 157
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
G+P E+I KD +R Y+ A+EA YGL D+I+
Sbjct: 158 GQPLEKIQKDTERDNYLTAEEAKEYGLIDEIM 189
>sp|A8YUD9|CLPP_LACH4 ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
helveticus (strain DPC 4571) GN=clpP PE=3 SV=1
Length = 194
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD + +K I LYINS G G T AI D M + KS V T+ GMA
Sbjct: 48 LFLDAQDNTKDISLYINSPG---------GVITSGLAIMDTMNFIKSDVSTIAIGMAASM 98
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A++LL+ G KG R PNS+ ++ P+ G + G TD+ A ++ + + E+L + T
Sbjct: 99 ASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIAANEILKSRKKINEILHETT 157
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
G+P E+I KD +R Y+ A+EA YGL D+I+
Sbjct: 158 GQPLEKIQKDTERDNYLTAEEAKEYGLIDEIM 189
>sp|Q9L4P3|CLPP3_SYNE7 ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus
elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1
Length = 199
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD +++SKPIYLYINS G G+ T AI D M Y KS V T+ G+A
Sbjct: 52 LYLDSEDSSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSPVITICLGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL G+KG R P+S ++ P+ G +D+ +AK++ + +++A T
Sbjct: 103 GAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
G+P E+I KD R +M A+EA YGL D++I
Sbjct: 163 GQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194
>sp|Q5N1Q7|CLPP2_SYNP6 ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=clpP2 PE=3 SV=1
Length = 199
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD +++SKPIYLYINS G G+ T AI D M Y KS V T+ G+A
Sbjct: 52 LYLDSEDSSKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSPVITICLGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL G+KG R P+S ++ P+ G +D+ +AK++ + +++A T
Sbjct: 103 GAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
G+P E+I KD R +M A+EA YGL D++I
Sbjct: 163 GQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194
>sp|Q21KA9|CLPP_SACD2 ATP-dependent Clp protease proteolytic subunit OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=clpP
PE=3 SV=1
Length = 212
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G+ T +I D M + K V T+ G A
Sbjct: 64 LFLEAENPDKDIHLYINSPG---------GSVTAGLSIYDTMQFIKPDVSTMCIGQACSM 114
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PN+ T ++ P G + G +D+ +A+++ E E++A T
Sbjct: 115 GAFLLTAGAKGKRFCLPNARTMIHQPS-GGAQGQASDIHIQAQEILKLRERLNEIMAGHT 173
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+ EEIA+D +R ++M A E++ YGL DK+++ +
Sbjct: 174 GRGVEEIARDTERDRFMSAHESVEYGLIDKVLERR 208
>sp|C4Z1T6|CLPP_EUBE2 ATP-dependent Clp protease proteolytic subunit OS=Eubacterium
eligens (strain ATCC 27750 / VPI C15-48) GN=clpP PE=3
SV=1
Length = 193
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ SK I+ YINS G G+ + +AI D M Y K V T+ GMA
Sbjct: 49 LFLEAEDPSKDIHFYINSPG---------GSVSAGFAIYDTMQYIKCDVSTICIGMAASM 99
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS GAKG R PN+ ++ P G + G T++ A+++ E+LA T
Sbjct: 100 GAFLLSGGAKGKRLALPNAEIMIHQPS-GGARGQETEIRIVAENILKTRNKLNEILAANT 158
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
GK EEI++D +R YM A+EA+ YGL D +++ +
Sbjct: 159 GKSVEEISRDTERDNYMTAQEAVAYGLIDSVVEKR 193
>sp|Q9K888|CLPP2_BACHD ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=clpP2 PE=3 SV=1
Length = 194
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 10/154 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K IYLYINS G G+ + +AI D M + K ++T+ GMA
Sbjct: 50 LFLEAENPKKDIYLYINSPG---------GSTSAGFAIYDTMQFVKPSIHTICTGMAASF 100
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AA+LL G KG R PNS ++ P G + G +D+ AK + E + + ++ T
Sbjct: 101 AAILLLAGTKGKRFALPNSEIMIHQPS-GGAQGQASDLAITAKRILGIREKLVTVTSERT 159
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154
G+ E++AKD+ R +M A+EA+ YG+ D+II S
Sbjct: 160 GQSPEKVAKDMDRDYFMSAEEALEYGIVDQIITS 193
>sp|B2GAL4|CLPP_LACF3 ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
fermentum (strain NBRC 3956 / LMG 18251) GN=clpP PE=3
SV=1
Length = 196
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD +++K IYLYINS G G T AI D M + KS V T+ GMA
Sbjct: 49 LFLDAQDSTKDIYLYINSPG---------GVVTSGMAIYDTMNFIKSDVQTIVIGMAASM 99
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A++L+S G KG R P+S+ ++ P G + G T++ A+++ + E+LAK +
Sbjct: 100 ASVLVSSGTKGKRFGLPHSTVMIHQPS-GGAQGQQTEIQIAAEEILKTRKMINEILAKNS 158
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
G+ E++ +D +R Y+ A+EA+ YGL D ++DS +
Sbjct: 159 GQSFEQVEQDTERDHYLTAQEAVDYGLLDGVMDSNN 194
>sp|B2KCS5|CLPP_ELUMP ATP-dependent Clp protease proteolytic subunit OS=Elusimicrobium
minutum (strain Pei191) GN=clpP PE=3 SV=1
Length = 195
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 11/155 (7%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD +++ + I LYINS G G T AI D M + K+ + T+ G A
Sbjct: 47 LYLDAEDSEREINLYINSPG---------GLVTAGLAIYDTMQFIKAPITTICMGQAMSF 97
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVV--GRSSGPVTDMWRKAKDLEANAESYIELLAK 118
A+LL+ G+KG R P++ ++ P++ G SG VTD+ ++ +L N E +++LA
Sbjct: 98 GAVLLAAGSKGKRYALPHARIMIHQPLIWGGGISGQVTDIEIESNELRKNKEHLLDILAH 157
Query: 119 GTGKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153
TG+ KE+I +D +R YM A+EA YGL D+++D
Sbjct: 158 HTGQDKEKIRQDSERNYYMSAQEAKAYGLIDEVLD 192
>sp|Q6D827|CLPP_ERWCT ATP-dependent Clp protease proteolytic subunit OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=clpP PE=3 SV=1
Length = 207
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K IYLYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+AK T
Sbjct: 113 GAFLLTAGAKGKRICLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKAKMNELMAKHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P E I +D +R +++ A EA+ YGL D + ++
Sbjct: 172 GQPLEAIERDTERDRFLSASEAVEYGLVDSVFTNR 206
>sp|Q74K84|CLPP_LACJO ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
johnsonii (strain CNCM I-12250 / La1 / NCC 533) GN=clpP
PE=3 SV=1
Length = 195
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD + +K I LYINS G G T AI D M + KS V T+ GMA
Sbjct: 48 LFLDAQDNTKDISLYINSPG---------GVITSGLAIMDTMNFIKSDVSTIAIGMAASM 98
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A++LL+ G KG R PNS+ ++ P+ G + G TD+ A ++ + + ++L + T
Sbjct: 99 ASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIAANEILKSRKKLNQILHETT 157
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P ++I KD +R Y+ A+EA YGL D+I+ +Q
Sbjct: 158 GQPLDKILKDTERDNYLSAEEAKDYGLIDEILVNQ 192
>sp|Q042E8|CLPP_LACGA ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus
gasseri (strain ATCC 33323 / DSM 20243) GN=clpP PE=3
SV=1
Length = 195
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD + +K I LYINS G G T AI D M + KS V T+ GMA
Sbjct: 48 LFLDAQDNTKDISLYINSPG---------GVITSGLAIMDTMNFIKSDVSTIAIGMAASM 98
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A++LL+ G KG R PNS+ ++ P+ G + G TD+ A ++ + + ++L + T
Sbjct: 99 ASILLTSGTKGKRFALPNSTVLIHQPL-GGAQGQQTDIQIAANEILKSRKKLNQILHETT 157
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P ++I KD +R Y+ A+EA YGL D+I+ +Q
Sbjct: 158 GQPLDKILKDTERDNYLSAEEAKDYGLIDEILVNQ 192
>sp|Q8RHJ8|CLPP_FUSNN ATP-dependent Clp protease proteolytic subunit OS=Fusobacterium
nucleatum subsp. nucleatum (strain ATCC 25586 / CIP
101130 / JCM 8532 / LMG 13131) GN=clpP PE=3 SV=1
Length = 193
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I +YINS G G+ TD AI D M Y K V TV G A
Sbjct: 48 LYLEAEDPEKDIIMYINSPG---------GSVTDGMAIYDTMNYIKPDVQTVCVGQAASM 98
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVV-GRSSGPVTDMWRKAKDLEANAESYIELLAKG 119
A LL+ GAKG R NS ++ P++ G G TD+ A +L + ELLAK
Sbjct: 99 GAFLLAAGAKGKRFALENSRIMIHQPLISGGLKGQATDISIHANELLKIKDRLAELLAKN 158
Query: 120 TGKPKEEIAKDIQRPKYMQAKEAIVYGLADKI 151
TGK KE+I +D +R Y+ ++EA+ YGL D +
Sbjct: 159 TGKTKEQILRDTERDNYLSSEEAVNYGLIDSV 190
>sp|B4EU53|CLPP_PROMH ATP-dependent Clp protease proteolytic subunit OS=Proteus mirabilis
(strain HI4320) GN=clpP PE=3 SV=1
Length = 207
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I LYINS G G T +I D M Y K+ V T+ G A
Sbjct: 62 LFLEAENPEKDINLYINSPG---------GVITAGMSIYDTMQYIKADVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS GAKG R PNS ++ P+ G G TD+ A+++ EL+A+ T
Sbjct: 113 GAFLLSAGAKGKRICLPNSRVMIHQPL-GGYQGQATDIQIHAQEILKVKSRMNELMAQHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKI 151
GK EEI +D +R +++ A EA+ YGL DK+
Sbjct: 172 GKSIEEIERDTERDRFLSANEALEYGLVDKV 202
>sp|Q93AD7|CLPP_CYAP8 ATP-dependent Clp protease proteolytic subunit OS=Cyanothece sp.
(strain PCC 8801) GN=clpP PE=3 SV=1
Length = 199
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD ++ KPIYLYINS G G+ T AI D M Y KS V T+ G+A
Sbjct: 52 LYLDSEDPGKPIYLYINSPG---------GSVTAGMAIYDTMQYIKSDVITICVGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ G G R P++ ++ P+ G TD+ +A ++ + E+LA T
Sbjct: 103 GAFLLASGTPGKRLALPHARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAHKT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+ E+I KD R YM A+EA YGL DK+I+ +
Sbjct: 163 GQTIEKIQKDTDRDYYMSAEEAQAYGLIDKVIEDR 197
>sp|A0Q2L1|CLPP_CLONN ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi
(strain NT) GN=clpP PE=3 SV=1
Length = 195
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K IYLYINS G G+ T AI D M Y K V T+ GMA
Sbjct: 49 LFLEAEDPDKDIYLYINSPG---------GSITAGMAIYDTMQYIKPDVSTICIGMAASM 99
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P +G G TD+ A + + +L++ T
Sbjct: 100 GAFLLTAGAKGKRFALPNSEIMIHQP-LGGFQGQATDIGIHANRILKIKDKLNSILSERT 158
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P E I KD++R +M+A+EA YGL D +I S+
Sbjct: 159 GQPLEVIKKDVERDNFMEAEEAKEYGLIDDVITSR 193
>sp|Q0ST53|CLPP_CLOPS ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain SM101 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I+LYINS G G+ T AI D M Y K V T+ GMA
Sbjct: 50 LFLESEDPDKDIHLYINSPG---------GSITSGMAIYDTMQYIKPDVSTICIGMAASM 100
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS GAKG R PN+ ++ P+ G G TD+ AK + + ++L++ T
Sbjct: 101 GAFLLSSGAKGKRFALPNAEIMIHQPL-GGFQGQATDIDIHAKRILKIKDKLNQILSENT 159
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153
+P E+I D++R +M+A EA+ YGL DK+I+
Sbjct: 160 NQPLEKIKVDVERDYFMEASEAVEYGLIDKVIE 192
>sp|Q8XKK1|CLPP_CLOPE ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain 13 / Type A) GN=clpP PE=3 SV=1
Length = 194
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I+LYINS G G+ T AI D M Y K V T+ GMA
Sbjct: 50 LFLESEDPDKDIHLYINSPG---------GSITSGMAIYDTMQYIKPDVSTICIGMAASM 100
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS GAKG R PN+ ++ P+ G G TD+ AK + + ++L++ T
Sbjct: 101 GAFLLSSGAKGKRFALPNAEIMIHQPL-GGFQGQATDIDIHAKRILKIKDKLNQILSENT 159
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153
+P E+I D++R +M+A EA+ YGL DK+I+
Sbjct: 160 NQPLEKIKVDVERDYFMEASEAVEYGLIDKVIE 192
>sp|Q0TQK2|CLPP_CLOP1 ATP-dependent Clp protease proteolytic subunit OS=Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
GN=clpP PE=3 SV=1
Length = 194
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I+LYINS G G+ T AI D M Y K V T+ GMA
Sbjct: 50 LFLESEDPDKDIHLYINSPG---------GSITSGMAIYDTMQYIKPDVSTICIGMAASM 100
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS GAKG R PN+ ++ P+ G G TD+ AK + + ++L++ T
Sbjct: 101 GAFLLSSGAKGKRFALPNAEIMIHQPL-GGFQGQATDIDIHAKRILKIKDKLNQILSENT 159
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIID 153
+P E+I D++R +M+A EA+ YGL DK+I+
Sbjct: 160 NQPLEKIKVDVERDYFMEASEAVEYGLIDKVIE 192
>sp|Q2NV79|CLPP_SODGM ATP-dependent Clp protease proteolytic subunit OS=Sodalis
glossinidius (strain morsitans) GN=clpP PE=3 SV=2
Length = 194
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
M+L+ +N K IYLYINS G G T +I D M + K V T G A
Sbjct: 49 MFLEAENPEKDIYLYINSPG---------GVITAGMSIYDTMQFIKPDVSTFCMGQAASM 99
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ A+++ EL+AK T
Sbjct: 100 GAFLLAAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAREILKVKARMNELMAKHT 158
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P E I +D +R +++ A EA+ YGL D ++ +
Sbjct: 159 GQPLEVIERDTERDRFLSAPEAVDYGLVDSVLSQR 193
>sp|B0SZQ2|CLPP_CAUSK ATP-dependent Clp protease proteolytic subunit OS=Caulobacter sp.
(strain K31) GN=clpP PE=3 SV=1
Length = 208
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I +YINS G G T AI D M Y KS V TV GMA
Sbjct: 57 LFLESENPKKEIAMYINSPG---------GVVTAGLAIYDTMQYIKSPVSTVCMGMAASM 107
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
++LL GA G+R PN+ ++ P G G +D+ R A+D+ E+ K T
Sbjct: 108 GSLLLQAGAPGHRIALPNARIMVHQPS-GGFRGQASDIERHAEDIIKTKRRLNEIYVKHT 166
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDAAYEK 161
G+ EE+ K + R +M A+EA +GL D I +S+D A EK
Sbjct: 167 GRTYEEVEKTLDRDHFMSAEEAKAWGLIDHINESRDEADEK 207
>sp|Q2RL31|CLPP_MOOTA ATP-dependent Clp protease proteolytic subunit OS=Moorella
thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1
Length = 199
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I+LYINS G G+ + AI D M Y + V T+ G+A
Sbjct: 50 LFLEAEDPDKDIHLYINSPG---------GSISAGMAIFDTMQYIRPDVSTICVGLAASM 100
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G + G D+ AK + A ++ +L++ T
Sbjct: 101 GAFLLAAGAKGKRFALPNSEIMIHQPM-GGTQGQAVDIEIHAKRILAIRDNLNRILSEIT 159
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GKP E+IA+D R +M A+EA YGL D++I ++
Sbjct: 160 GKPLEQIARDTDRDHFMTAREAREYGLIDEVITKRE 195
>sp|A8F754|CLPP_THELT ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
lettingae (strain ATCC BAA-301 / DSM 14385 / TMO)
GN=clpP PE=3 SV=1
Length = 199
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I LYINS G G+ T AI D M Y KS V T+ G A
Sbjct: 53 LFLEAEDPDKDIQLYINSPG---------GSVTAGLAIYDTMQYIKSDVVTICVGQAASM 103
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AA+LL+ G KG R PN+ L+ P+ G + GPV D+ K+L +L++ T
Sbjct: 104 AAVLLASGTKGKRFALPNARIMLHQPL-GGAEGPVKDVEIITKELLRIKNLINTILSEKT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P + I KD R +M A EA+ YGL DK+I+S+
Sbjct: 163 GQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIESK 197
>sp|Q9K709|CLPP1_BACHD ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
/ JCM 9153 / C-125) GN=clpP1 PE=3 SV=1
Length = 194
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L ++ K I LYINS G G+ T AI D M Y K V T+ GMA
Sbjct: 49 LFLQAEDPDKDISLYINSPG---------GSITAGMAIYDTMQYIKPNVSTICIGMAASM 99
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G + G +D+ + + E+ +LA+ T
Sbjct: 100 GAFLLAAGAKGKRFALPNSEVMIHQPL-GGTRGQASDIEIHTRRILEMRETLNRILAERT 158
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDS 154
G+P E+IAKD R +M A++A YGL DK+I++
Sbjct: 159 GQPLEQIAKDTDRDNFMTAEKAREYGLIDKVIET 192
>sp|Q3AVC3|CLPP3_SYNS9 ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus
sp. (strain CC9902) GN=clpP3 PE=3 SV=1
Length = 200
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD +++SKPIYLYINS G G+ T AI D + Y KS+V T+ G+A
Sbjct: 52 LYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTIQYVKSEVVTICVGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ G KG R P+S ++ P+ G S +D+ +A+++ + LA +
Sbjct: 103 GAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHSLADMS 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
G+ E+I KD R ++ A+EA+ YGL D++I
Sbjct: 163 GQTFEKIEKDTDRDYFLSAEEAMAYGLIDRVI 194
>sp|Q66DT4|CLPP_YERPS ATP-dependent Clp protease proteolytic subunit OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=clpP
PE=3 SV=1
Length = 207
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+A T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAYHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|A4TPE3|CLPP_YERPP ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
(strain Pestoides F) GN=clpP PE=3 SV=1
Length = 207
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+A T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAYHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|Q1CL65|CLPP_YERPN ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=clpP PE=3 SV=1
Length = 207
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+A T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAYHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|Q8ZC65|CLPP_YERPE ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
GN=clpP PE=3 SV=1
Length = 207
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+A T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAYHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|Q1C4K8|CLPP_YERPA ATP-dependent Clp protease proteolytic subunit OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=clpP PE=3 SV=1
Length = 207
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+A T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAYHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|A7FLC4|CLPP_YERP3 ATP-dependent Clp protease proteolytic subunit OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=clpP PE=3 SV=1
Length = 207
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K I+LYINS G G T +I D M + K V T+ G A
Sbjct: 62 LFLEAENPEKDIFLYINSPG---------GVITAGMSIYDTMQFIKPDVSTICMGQACSM 112
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P+ G G TD+ AK++ EL+A T
Sbjct: 113 GAFLLTAGAKGKRFCLPNSRVMIHQPL-GGFQGQATDIEIHAKEILKVKSRMNELMAYHT 171
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
GK EEI +D +R +++ A++++ YGL D + +D
Sbjct: 172 GKSLEEIERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>sp|A4XHW0|CLPP_CALS8 ATP-dependent Clp protease proteolytic subunit
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=clpP PE=3 SV=1
Length = 195
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K IYLYINS G G+ T +AI D + Y K V T+ GMA
Sbjct: 50 LFLEAEDPDKDIYLYINSPG---------GSVTAGFAIYDTIQYIKPDVSTICVGMAASM 100
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LL+ GAKG R PNS ++ P +G G TD+ A+ + + +LA+ T
Sbjct: 101 GAFLLAAGAKGKRFALPNSEIMIHQP-IGGVRGQATDIKIHAEWILKIKQRINRILAERT 159
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+P E I +D +R +M A+EA+ YG+ DK+I+ +
Sbjct: 160 GQPIEVIERDTERDFFMTAEEALKYGIIDKVIERR 194
>sp|Q1H1G0|CLPP_METFK ATP-dependent Clp protease proteolytic subunit OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpP
PE=3 SV=1
Length = 213
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ +N K IY YINS G G+ T I D M + K V T+ G A
Sbjct: 65 LFLEAENPDKDIYFYINSPG---------GSVTAGMGIYDTMQFVKPDVSTLCVGQAASM 115
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A+LL+ GA+G R PNS ++ P+ G G +D+ AK++ E +LA T
Sbjct: 116 GALLLAAGAQGKRFCLPNSRVMIHQPL-GGFQGQASDIEIHAKEILFLREKLNHILASHT 174
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ-DAA 158
G+P E+IA D R +M A++++ YG+ DK+I S+ DAA
Sbjct: 175 GQPVEKIALDTDRDNFMSAEQSVAYGIVDKVIASRADAA 213
>sp|Q8D346|CLPP_WIGBR ATP-dependent Clp protease proteolytic subunit OS=Wigglesworthia
glossinidia brevipalpis GN=clpP PE=3 SV=1
Length = 194
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K I+LYINS G G T +I D M + K +V T+ G +
Sbjct: 49 IFLESEDPEKDIFLYINSPG---------GVVTSGMSIYDTMQFIKCEVSTLCIGQSSSM 99
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AA++L+ G KG R PN+ ++ P+ G S G TD+ ++ + IELL+K T
Sbjct: 100 AALILASGEKGKRFSLPNARIMIHQPL-GGSQGQATDIAIHTTEILKIKKCMIELLSKHT 158
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQ 155
G+ E I+KD +R ++ EA++YGL DK+I +
Sbjct: 159 GQSAEIISKDTERDRFFSGSEAVIYGLIDKVITCR 193
>sp|Q8YXH5|CLPP1_NOSS1 ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=clpP1 PE=3 SV=1
Length = 204
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD ++ K IYLYINS G G+ T I D M + + V T+ G+A
Sbjct: 48 LFLDAEDPEKDIYLYINSPG---------GSVTAGMGIFDTMKHIRPDVCTICTGLAASM 98
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS GAKG R P+S ++ P+ G + G TD+ +A+++ + + LA+ T
Sbjct: 99 GAFLLSAGAKGKRMSLPHSRIMIHQPL-GGAQGQATDIEIQAREILYHKRRLNDYLAEHT 157
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQDA 157
G+P E IA+D +R +M EA YGL D++ID A
Sbjct: 158 GQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDRHAA 194
>sp|Q46JF7|CLPP2_PROMT ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus
marinus (strain NATL2A) GN=clpP2 PE=3 SV=1
Length = 200
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++LD +++SKPIYLYINS G G+ T AI D M Y KS + T+ G+A
Sbjct: 52 LYLDSEDSSKPIYLYINSPG---------GSVTAGLAIYDTMKYVKSDLVTICVGLAASM 102
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
A LLS G KG R P+S ++ P+ G + +D+ +A+++ E + +A+ T
Sbjct: 103 GAFLLSAGTKGKRLALPHSRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMT 162
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKII 152
G+ E+I KD R ++ A+EA YGL D++I
Sbjct: 163 GQTYEKIEKDTDRDYFLSAEEAKNYGLIDRVI 194
>sp|B1L812|CLPP_THESQ ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp.
(strain RQ2) GN=clpP PE=3 SV=1
Length = 203
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K +YLYINS G G+ T AI D M Y K V T+ G A
Sbjct: 58 LFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASM 108
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AA+LL+ GAKG R PN+ ++ P+ G + GP D+ ++L + +L+K T
Sbjct: 109 AAVLLAAGAKGKRYALPNARIMIHQPL-GGAEGPAKDVEIITRELLRIKDLLNRILSKHT 167
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
G+P E+I KD R +M A+EA YG+ DK++ +++
Sbjct: 168 GQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVVSTRE 203
>sp|A5IJ91|CLPP_THEP1 ATP-dependent Clp protease proteolytic subunit OS=Thermotoga
petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995)
GN=clpP PE=3 SV=1
Length = 203
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 1 MWLDFDNASKPIYLYINSSGTQNEKKESVGAETDAYAIADAMAYCKSKVYTVNCGMAYGQ 60
++L+ ++ K +YLYINS G G+ T AI D M Y K V T+ G A
Sbjct: 58 LFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASM 108
Query: 61 AAMLLSVGAKGYRGLQPNSSTKLYLPVVGRSSGPVTDMWRKAKDLEANAESYIELLAKGT 120
AA+LL+ GAKG R PN+ ++ P+ G + GP D+ ++L + +L+K T
Sbjct: 109 AAVLLAAGAKGKRYALPNARIMIHQPL-GGAEGPAKDVEIITRELLRIKDLLNRILSKHT 167
Query: 121 GKPKEEIAKDIQRPKYMQAKEAIVYGLADKIIDSQD 156
G+P E+I KD R +M A+EA YG+ DK++ +++
Sbjct: 168 GQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVVSTRE 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,441,973
Number of Sequences: 539616
Number of extensions: 2643498
Number of successful extensions: 7911
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6066
Number of HSP's gapped (non-prelim): 778
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)