Citrus Sinensis ID: 029705

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTLGF
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHcccccHHHHccccccccHHHHHHHHHHHHccccccccEEcccccccccccccHHHHHHcHHcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHcccccHccccccccccHHHHHHHHHHcccccEEEEEEccccccccccEEcHHHHHccccHccccccccHcHHHcccccccccccHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
masklaamVPFSCILVLMLLGLassnidqdkaECADKVVALATClpyvggdaktptvdccgglkQLLDKSKKCLCLLikdkddpslglkinstlaanlptachspanvsecinllhlppnspdakvfqgfsnltqghggtpatavgsnskngspsadqksdggkasRLLGLEMAVWGFSLHFLLVTLGF
Flexible Loop (DISEMBL)
MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPyvggdaktptVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTLGF
Low Complexity Region (SEG)
MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGlkqlldkskkclcllikdkddPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTLGF
Disordered region (IsUnstruct)
*****AAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLP*************************************************LLGLEMAVWGFSLHFLLVTL**
Disordered Region (DISOPRED)
**********FSCILVLMLLGLA**************VVALATCLPYVG*DAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANV**************************************************************LEMAVWGFSLHFLLVTLGF
Disordered Region (DISEMBL)
MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQG***************************KASRLLGLEMAVWGFSLHFLLVTLGF
Disordered Region (DISPRO)
**SKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPP*********************************************ASRLLGLEMAVWGFSLHFLLVTLGF
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (HMMTOP)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTLGF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q9C7F7	193	Uncharacterized GPI-ancho	no	no	0.798	0.782	0.313	2e-10
Q8VYI9	182	Non-specific lipid-transf	no	no	0.402	0.417	0.373	3e-06
Q9ZQI8	169	Non-specific lipid-transf	no	no	0.465	0.520	0.293	5e-05
Q9FFY3	151	Lipid transfer-like prote	no	no	0.539	0.675	0.294	0.0005

>sp|Q9C7F7|UGPI5_ARATH Uncharacterized GPI-anchored protein At1g27950 OS=Arabidopsis thaliana GN=At1g27950 PE=1 SV=1

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 15/166 (9%)

Query: 33  ECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLK--- 89
           EC      +  CL +  G A  P+  CC  ++ + ++  KCLC +I+        LK   
Sbjct: 34  ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLG 93

Query: 90  INSTLAANLPTACH-SPANVSECINLLHLPPNSPDAKVFQGFSNLT--QGHGGTPATAVG 146
           +       LPT+C    A+++ C  LL + P+SPDA VF   +  T     G +PAT   
Sbjct: 94  VQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPATPAT 153

Query: 147 SNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLL---VTLGF 189
           S  K GS SA    DG     ++ L +A+   S    L   VTLG 
Sbjct: 154 STDKGGSASA---KDG---HAVVALAVALMAVSFVLTLPRHVTLGM 193

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYI9|NLTL5_ARATH Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 7/83 (8%)

Query: 33  ECADKVVALATCLPYV--GGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKI 90
           +C+  ++ +A CL +V  GG    P   CC GLK +L    +CLC   K     SLG+ +
Sbjct: 42  DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSA--SLGVTL 99

Query: 91  NSTLAANLPTAC--HSPANVSEC 111
           N T A+ LP AC  H+P +++ C
Sbjct: 100 NITKASTLPAACKLHAP-SIATC 121

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQI8|NLTL2_ARATH Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1

 Score = 47.8 bits (112), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 14  ILVLMLLGLASSNIDQDKAECADKVVALATCLPYV--GGDAKTPTVDCCGGLKQLLDKSK 71
           +++  ++ L S        +C+  ++ +A CL +V  G     P   CC GLK ++    
Sbjct: 7   LMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGP 66

Query: 72  KCLCLLIKDKDDPSLGLKINSTLAANLPTACH 103
           +CLC   K+    SLGL ++ + AA+LP+ C 
Sbjct: 67  ECLCEAFKNSG--SLGLTLDLSKAASLPSVCK 96

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFY3|VAS_ARATH Lipid transfer-like protein VAS OS=Arabidopsis thaliana GN=VAS PE=2 SV=1

 Score = 44.3 bits (103), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 5   LAAMVPFSCILVLMLLGLASS-NIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGL 63
           +  M  FS  +VL+L+  +S   I+     C ++   LA CL Y+ G  + P V CC  L
Sbjct: 2   MMGMKFFSFYVVLLLVAASSGMRINGQSVSCLNQ---LAPCLNYLNGTKEVPQV-CCNPL 57

Query: 64  KQLLDKSKKCLCLLIKDK---DDPSLGLKINSTLAANLPTACHSPANVSECI 112
           K ++  + +CLC +I ++        G+ +N   A  LP  C    N   C+
Sbjct: 58  KSVIRNNPECLCRMISNRWSSQAERAGIDVND--AQMLPARCGEHVNPIACL 107

Promotes the number of phloem (pro)cambial and pericycle cells.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
400131570	193	T4.9 [Malus x robusta]	0.984	0.963	0.555	2e-49
224076010	190	predicted protein [Populus trichocarpa]	0.920	0.915	0.570	2e-49
225435694	188	PREDICTED: non-specific lipid-transfer p	0.957	0.962	0.532	6e-49
449517551	187	PREDICTED: uncharacterized GPI-anchored	0.947	0.957	0.534	3e-46
297746435	171	unnamed protein product [Vitis vinifera]	0.867	0.959	0.556	4e-46
224148111	166	predicted protein [Populus trichocarpa]	0.730	0.831	0.640	4e-46
449452729	187	PREDICTED: uncharacterized GPI-anchored	0.947	0.957	0.529	5e-46
255580080	145	lipid binding protein, putative [Ricinus	0.687	0.896	0.669	1e-45
224057104	189	predicted protein [Populus trichocarpa]	0.851	0.851	0.563	1e-45
351724279	182	uncharacterized protein LOC100305590 pre	0.751	0.780	0.587	4e-45

>gi|400131570|emb|CCH50970.1| T4.9 [Malus x robusta]

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 137/189 (72%), Gaps = 3/189 (1%)

Query: 3   SKLAAMVPFSCILVLM-LLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCG 61
           SK  ++   SC LVL+ L+G  S NIDQDKAECAD++V LA CLPYVGGDAK+PT+DCC 
Sbjct: 4   SKNVSVQVLSCTLVLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCCS 63

Query: 62  GLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNS 121
           G+K ++ KSKKCLC+LIKD+DDP LGLKIN+TLA NLP++CH P N+S C++LL+LP NS
Sbjct: 64  GIKVVVQKSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSNS 123

Query: 122 PDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASR-LLGLEMAVWGFSL 180
           PDAK+F+ + N T+    T A     NS +    A +KSDGG   + L+G+EM ++G  L
Sbjct: 124 PDAKMFRDYENKTEARSSTTAPISSGNSTSSGTVAQEKSDGGSLGKSLMGIEM-LFGSLL 182

Query: 181 HFLLVTLGF 189
            F +  L F
Sbjct: 183 LFYIPHLVF 191

Source: Malus x robusta

Species: Malus x robusta

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076010|ref|XP_002304871.1| predicted protein [Populus trichocarpa] gi|222842303|gb|EEE79850.1| predicted protein [Populus trichocarpa]

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 130/177 (73%), Gaps = 3/177 (1%)

Query: 14  ILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKC 73
           +++LML+G A S+  QD+AECAD++V LATCLPYV  DAK PT+DCC GLKQ+LDKSKKC
Sbjct: 16  LVLLMLVGSAKSDFQQDRAECADQLVGLATCLPYVSDDAKAPTLDCCSGLKQVLDKSKKC 75

Query: 74  LCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNL 133
           LC+LIKD+D+P+LG+K N +L A LP+ CHSP NV+ECINLLHLP NSPDAK F+GF+N+
Sbjct: 76  LCVLIKDRDNPNLGIKFNVSLVAKLPSLCHSPVNVTECINLLHLPANSPDAKFFEGFANV 135

Query: 134 TQ-GHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTLGF 189
           TQ G   TP  +  S   N S +A++ SD   A+R L  E+      L F   ++GF
Sbjct: 136 TQSGSIDTPVGSGSSIGSNPSSAAEKSSDERPANRWLVAEIVCGSLLLAF--TSVGF 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435694|ref|XP_002283442.1| PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Vitis vinifera]

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 99/186 (53%), Positives = 137/186 (73%), Gaps = 5/186 (2%)

Query: 1   MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCC 60
           MASK A +     ++++MLL  AS++  +D+ ECAD++V LATCLPYVGG+ K+PT+DCC
Sbjct: 1   MASKYAVLGLLDMLVIMMLLMSASADFAKDREECADQLVGLATCLPYVGGEGKSPTLDCC 60

Query: 61  GGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPN 120
            GLKQ+L K++KCLC+LIKD++DP+LGLKIN+TLA  LP+ACH+PAN+S C  LL LP  
Sbjct: 61  TGLKQVLQKARKCLCILIKDRNDPNLGLKINATLAMGLPSACHAPANISACPALLQLPAG 120

Query: 121 SPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSL 180
           SPDAK+F+ + N T     T   +  +NS +GS SA+ KSDGG+  R +G+E+    F L
Sbjct: 121 SPDAKIFEEYGNSTAASKSTSVASAKANSSSGS-SAEMKSDGGR-RRWVGVELV---FGL 175

Query: 181 HFLLVT 186
            FL+V+
Sbjct: 176 LFLIVS 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517551|ref|XP_004165809.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950-like [Cucumis sativus]

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/187 (53%), Positives = 133/187 (71%), Gaps = 8/187 (4%)

Query: 1   MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCC 60
           MAS L+    F C  +L+L   A+S+IDQD+ +C+D+++ LA CLPYV GDAKTPT+DCC
Sbjct: 1   MASALSTF-SFICNFLLLLASFAASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCC 59

Query: 61  GGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPN 120
            GLKQ++ KSKKCLC+LIKDKDDP+LGLKIN +LA  LP ACH+PAN++ECI+LLHL PN
Sbjct: 60  SGLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPN 119

Query: 121 SPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPS-ADQKSDGGKASRLLGLEMAVWGFS 179
           S +AK+F+  SN T     +P T V     +GS S A++KSDGG   R +G    +    
Sbjct: 120 STEAKIFKE-SNPTSEPSSSPDTKV-----HGSSSVANEKSDGGMGKRWIGGTEMIVKIL 173

Query: 180 LHFLLVT 186
           L F +++
Sbjct: 174 LGFFILS 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746435|emb|CBI16491.3| unnamed protein product [Vitis vinifera]

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/169 (55%), Positives = 127/169 (75%), Gaps = 5/169 (2%)

Query: 18  MLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLL 77
           MLL  AS++  +D+ ECAD++V LATCLPYVGG+ K+PT+DCC GLKQ+L K++KCLC+L
Sbjct: 1   MLLMSASADFAKDREECADQLVGLATCLPYVGGEGKSPTLDCCTGLKQVLQKARKCLCIL 60

Query: 78  IKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGH 137
           IKD++DP+LGLKIN+TLA  LP+ACH+PAN+S C  LL LP  SPDAK+F+ + N T   
Sbjct: 61  IKDRNDPNLGLKINATLAMGLPSACHAPANISACPALLQLPAGSPDAKIFEEYGNSTAAS 120

Query: 138 GGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVT 186
             T   +  +NS +GS SA+ KSDGG+  R +G+E+    F L FL+V+
Sbjct: 121 KSTSVASAKANSSSGS-SAEMKSDGGR-RRWVGVELV---FGLLFLIVS 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224148111|ref|XP_002336593.1| predicted protein [Populus trichocarpa] gi|222836272|gb|EEE74693.1| predicted protein [Populus trichocarpa]

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/139 (64%), Positives = 111/139 (79%), Gaps = 1/139 (0%)

Query: 14  ILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKC 73
           +++LML+G A S+  QD+AECAD++V LATCLPYV  DAK PT+DCC GLKQ+LDKSKKC
Sbjct: 16  LVLLMLVGSAKSDFQQDRAECADQLVGLATCLPYVSDDAKAPTLDCCSGLKQVLDKSKKC 75

Query: 74  LCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNL 133
           LC+LIKD+D+P+LG+K N +L A LP+ CHSP NV+ECINLLHLP NSPDAK F+GF+N+
Sbjct: 76  LCVLIKDRDNPNLGIKFNVSLVAKLPSLCHSPVNVTECINLLHLPANSPDAKFFEGFANI 135

Query: 134 TQ-GHGGTPATAVGSNSKN 151
           TQ G   TP    G   K+
Sbjct: 136 TQSGSIDTPVLGSGRKLKS 154

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452729|ref|XP_004144111.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950-like [Cucumis sativus]

 Score =  189 bits (479), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 99/187 (52%), Positives = 133/187 (71%), Gaps = 8/187 (4%)

Query: 1   MASKLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCC 60
           MAS L+    F C  +L+L   ++S+IDQD+ +C+D+++ LA CLPYV GDAKTPT+DCC
Sbjct: 1   MASALSTF-SFICNFLLLLASFSASDIDQDRTDCSDQLIGLAQCLPYVSGDAKTPTIDCC 59

Query: 61  GGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPN 120
            GLKQ++ KSKKCLC+LIKDKDDP+LGLKIN +LA  LP ACH+PAN++ECI+LLHL PN
Sbjct: 60  SGLKQVVQKSKKCLCVLIKDKDDPNLGLKINGSLALALPHACHAPANITECISLLHLSPN 119

Query: 121 SPDAKVFQGFSNLTQGHGGTPATAVGSNSKNGSPS-ADQKSDGGKASRLLGLEMAVWGFS 179
           S +AK+F+  SN T     +P T V     +GS S A++KSDGG   R +G    +    
Sbjct: 120 STEAKIFKE-SNPTSEPSSSPDTKV-----HGSSSVANEKSDGGMGKRWIGGTEMIVKIL 173

Query: 180 LHFLLVT 186
           L F +++
Sbjct: 174 LGFFILS 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580080|ref|XP_002530873.1| lipid binding protein, putative [Ricinus communis] gi|223529562|gb|EEF31513.1| lipid binding protein, putative [Ricinus communis]

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/130 (66%), Positives = 109/130 (83%)

Query: 20  LGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIK 79
           +G  SS+  QD+AECA+++V LATCLPYVGG AKTPT+DCC GLK +LDKS+KCLC+LIK
Sbjct: 16  VGCGSSDFAQDRAECANQLVGLATCLPYVGGTAKTPTLDCCTGLKSVLDKSRKCLCVLIK 75

Query: 80  DKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGHGG 139
           D+D+P LG+K N+TLAA LP ACH+P NV+ECI+LLHLPP+SPDAKVF GF+N+T G+G 
Sbjct: 76  DRDNPDLGIKFNATLAAFLPAACHAPVNVTECIDLLHLPPSSPDAKVFAGFANVTGGNGT 135

Query: 140 TPATAVGSNS 149
           T A A   N+
Sbjct: 136 TTAVATSGNT 145

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057104|ref|XP_002299127.1| predicted protein [Populus trichocarpa] gi|118488583|gb|ABK96104.1| unknown [Populus trichocarpa] gi|222846385|gb|EEE83932.1| predicted protein [Populus trichocarpa]

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 119/165 (72%), Gaps = 4/165 (2%)

Query: 6   AAMVPFSCILVL-MLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLK 64
           A+ +P  CILVL ML+G A S+  QD+ ECAD++V LATCLPYVGGDAK PT+DCC GLK
Sbjct: 9   ASAIP--CILVLLMLVGTARSDFQQDRTECADQLVGLATCLPYVGGDAKAPTIDCCSGLK 66

Query: 65  QLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDA 124
           Q+LDKS KCLC+LIKD+D+P LG+K N +L A LP+ CH+P NV+ CI++LHLP  SPDA
Sbjct: 67  QVLDKSVKCLCVLIKDRDNPDLGIKFNVSLVAKLPSLCHAPVNVTNCIDILHLPAGSPDA 126

Query: 125 KVFQGFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLL 169
           KVF GF+N+T G    P  +  S     S +A++      A+R L
Sbjct: 127 KVFAGFANIT-GSVAAPVASANSTGSKSSTAAEKSGAERPANRWL 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724279|ref|NP_001237564.1| uncharacterized protein LOC100305590 precursor [Glycine max] gi|255626001|gb|ACU13345.1| unknown [Glycine max]

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 115/143 (80%), Gaps = 1/143 (0%)

Query: 21  GLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKD 80
           G A S++ +D+  CADK++ LA+C+PYVGG+AKTPT+DCC GLK +LD+SKKCLC+LIKD
Sbjct: 18  GFAKSDLSKDREGCADKLIDLASCVPYVGGEAKTPTIDCCTGLKAVLDRSKKCLCILIKD 77

Query: 81  KDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLTQGHGGT 140
           +DDP+LG+KIN+TLA  LP+ACHSPAN+++C++LLHL PNSPDAKVF+GF    + +  T
Sbjct: 78  RDDPNLGIKINATLAIQLPSACHSPANITQCVDLLHLAPNSPDAKVFEGFQKSAKTNSST 137

Query: 141 PATAVGSNSKNGSPSADQKSDGG 163
           P + V S ++ GS S+ Q+  G 
Sbjct: 138 PVS-VSSGAEKGSSSSAQEKSGA 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
TAIR|locus:2035711	227	AT1G55260 [Arabidopsis thalian	0.899	0.748	0.389	5.4e-31
TAIR|locus:2050492	204	AT2G44300 [Arabidopsis thalian	0.846	0.784	0.4	2e-24
TAIR|locus:2050482	205	AT2G44290 [Arabidopsis thalian	0.947	0.873	0.342	5.3e-24
TAIR|locus:2076406	177	AT3G58550 [Arabidopsis thalian	0.724	0.774	0.347	3.2e-17
TAIR|locus:2184817	158	AT5G09370 [Arabidopsis thalian	0.576	0.689	0.361	9.7e-09
TAIR|locus:2031551	193	AT1G73890 [Arabidopsis thalian	0.714	0.699	0.260	2.6e-08
TAIR|locus:2010479	193	LTPG1 "AT1G27950" [Arabidopsis	0.798	0.782	0.304	4.2e-08
TAIR|locus:1006230669	171	AT1G03103 "AT1G03103" [Arabido	0.804	0.888	0.248	1.7e-07
TAIR|locus:2039366	183	AT2G48130 [Arabidopsis thalian	0.798	0.825	0.268	1.8e-07
TAIR|locus:2077001	170	AT3G22600 [Arabidopsis thalian	0.735	0.817	0.225	1.8e-05

TAIR|locus:2035711 AT1G55260 [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 69/177 (38%), Positives = 102/177 (57%)

Query:    14 ILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXXXXXXXX 73
             ++  MLLG  +S++ QD+ EC ++++ L+TC+PYVGGDAK PT DCC G           
Sbjct:    56 VITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKC 115

Query:    74 XXXXXXXXXXPSLGLKINSTLAANLPTACHSPA-NVSECINLLHLPPNSPDAKVFQGFSN 132
                       P LG+KIN+TLAA+LP+ACH  A N+++CI++LHLP NS  AK F+    
Sbjct:   116 VCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGR 175

Query:   133 LTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTLGF 189
             +   +  T  T +  +   G  +   KS+G K    LG+E+ +      +LLV+L F
Sbjct:   176 IEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLI------YLLVSLIF 226

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2050492 AT2G44300 [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 66/165 (40%), Positives = 91/165 (55%)

Query:     4 KLAAMVPFSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGX 63
             K+  M     ++V+ ++  A+ +  +DK EC +++V +ATCLPYV G AK+PT DCC G 
Sbjct:     5 KINLMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGL 64

Query:    64 XXXXXXXXXXXXXXXXXXXXPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPD 123
                                 P LGL+IN +LA  LP+ CH+ A+V++C  LLHL PNSPD
Sbjct:    65 KQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPD 124

Query:   124 AKVFQGFSNLTQGHGGT-PATA-VGSNSKNGSPSADQKSDGGKAS 166
             A+VF     L +G   T PA+A  GS+    S S    SD G  S
Sbjct:   125 AQVFY---QLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNS 166

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2050482 AT2G44290 [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 63/184 (34%), Positives = 96/184 (52%)

Query:     4 KLAAMVP-FSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGG 62
             K+  M    + I+V M++  A ++  +DK EC  ++V +ATCLPYV G AK+PT DCC G
Sbjct:     5 KIKVMATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSG 64

Query:    63 XXXXXXXXXXXXXXXXXXXXXPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSP 122
                                  P LGL++N +LA  LP+ CH+ A++++C  LLHL PNSP
Sbjct:    65 LKQVINSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSP 124

Query:   123 DAKVFQGFS---NLTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFS 179
             DA+VF   +   N T        +A    S + +P +   ++ G+ + + G   A   FS
Sbjct:   125 DAQVFYQLAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQ-SFS 183

Query:   180 LHFL 183
               +L
Sbjct:   184 KQWL 187

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2076406 AT3G58550 [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 49/141 (34%), Positives = 72/141 (51%)

Query:    13 CILV-LMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXXXXXX 71
             CI V +M LG+ S  + QD   C D +  L +CLP+V   AK P   CC           
Sbjct:    17 CITVAVMFLGVRSE-LSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQ 75

Query:    72 XXXX--XXXXXXXXPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQG 129
                           P LG K+++  A +LP+ACH PAN+S+C +LLHL P+SP +++F+ 
Sbjct:    76 TRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQ 135

Query:   130 FSNLTQGHGGTPATAVGSNSK 150
             F+  +    G  A +  S+ K
Sbjct:   136 FTESSSQTVGHKAVSTSSSIK 156

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2184817 AT5G09370 [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 43/119 (36%), Positives = 54/119 (45%)

Query:     8 MVPFSCILVLMLLGLA-SSNIDQDKAECADKVVALATCLPYV--GGDAKTPTVDCCGGXX 64
             M  FS    L+LL L+ SS      ++C   V+ L  CLP++  GG A TPT  CC    
Sbjct:     1 MAYFSTATSLLLLVLSVSSPYVHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLK 60

Query:    65 XXXXXXXXXXXXXXXXXXXPSLGLKINSTLAANLPTACHSPAN-VSECINLLHLPPNSP 122
                                P LG+K+N T +A LP AC   A  VS C +L   PP SP
Sbjct:    61 NILDTKPICLCEGLKKA--P-LGIKLNVTKSATLPVACKLNAPPVSACDSL---PPASP 113

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2031551 AT1G73890 [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 38/146 (26%), Positives = 60/146 (41%)

Query:    12 SCILVLMLLGLAS----SNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXX 67
             S +L+ +L+ L++      + Q  A CA ++++LA C P+V G A+ P   CC       
Sbjct:     4 STLLITLLISLSAFFLRMVLAQVPATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIY 63

Query:    68 XXXXXXXXXXXXXXXXPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVF 127
                              S    IN TLA  LP  C+ PAN S C +    P  +P     
Sbjct:    64 SQEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTCSS--SFPGEAPSDS-- 119

Query:   128 QGFSNLTQGHGGTPATAVGSNSKNGS 153
                S++      +  + +   +KN S
Sbjct:   120 ---SSVAPPPSSSTGSQISQGAKNNS 142

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2010479 LTPG1 "AT1G27950" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 50/164 (30%), Positives = 63/164 (38%)

Query:    33 ECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXXXXXXXXXXXXXXXXXXPSLGLK--- 89
             EC      +  CL +  G A  P+  CC                           LK   
Sbjct:    34 ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLG 93

Query:    90 INSTLAANLPTAC--HSPANVSECINLLHLPPNSPDAKVFQGFSNLTQ--GHGGTPATAV 145
             +       LPT+C  H+ A+++ C  LL + P+SPDA VF   +  T     G +PAT  
Sbjct:    94 VQEDKLIQLPTSCQLHN-ASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPATPA 152

Query:   146 GSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLL-VTLG 188
              S  K GS SA    DG     L    MAV  F L     VTLG
Sbjct:   153 TSTDKGGSASA---KDGHAVVALAVALMAV-SFVLTLPRHVTLG 192

GO:0003674 "molecular_function" evidence=ND

GO:0006869 "lipid transport" evidence=IEA;IMP

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:1006230669 AT1G03103 "AT1G03103" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 39/157 (24%), Positives = 60/157 (38%)

Query:    14 ILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXXXXXXXX 73
             IL L++           +A C D + +L+ CL Y+ G + +P+  CC             
Sbjct:     5 ILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPEC 64

Query:    74 XXXXXXXXXXPSLGLKINSTLAANLPTACH-SPANVSECINLLHLPPNSPDAKVFQGFSN 132
                          G K N TLA NLPTAC+    + S C    ++P   P A    G   
Sbjct:    65 LCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLP-ANTPVGSPR 123

Query:   133 LTQGHGGTPATAVGSNSKNGSPSADQKSDGGKASRLL 169
                   GT + A   N+ +GS      ++    S ++
Sbjct:   124 SAPSPSGTTSPA---NTPSGSKKFPLSNESSSKSNVI 157

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2039366 AT2G48130 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 43/160 (26%), Positives = 65/160 (40%)

Query:    11 FSCILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXXXXX 70
             ++   V ++  L S    Q  + C   +  L+ CL Y+ G++ TP+  CC          
Sbjct:     7 YAITFVALVAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNSTTPSQPCCS-RLDSVIKS 65

Query:    71 XXXXXXXXXXXXXPSLGLKINSTLAANLPTACH--SPANVSECINLLHLPPNSPDAKVFQ 128
                          P++GL IN T A  LP AC+  +P  +++C N    P   P A    
Sbjct:    66 SPQCICSAVNSPIPNIGLNINRTQALQLPNACNIQTPP-LTQC-NAATGPTAQPPAP--- 120

Query:   129 GFSNLTQGHGGTPATAVGSNSKNGSPSADQKSDG-GKASR 167
               +  T     TP +  G+ S  G  S    S G G +SR
Sbjct:   121 SPTEKTPDVTLTPTSLPGARSGVGGGSKTVPSVGTGSSSR 160

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2077001 AT3G22600 [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 34/151 (22%), Positives = 63/151 (41%)

Query:    14 ILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGXXXXXXXXXXX 73
             + + + + + SS +   ++ C + +++++ CL Y+ G++ +P   CC             
Sbjct:     8 VFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDC 67

Query:    74 XXXXXXXXXXPSLGLKINSTLAANLPTACH--SPANVSECI-------NLLHLPPNSPDA 124
                         LG+ +N T A  LP AC+  +P  VS C        +    P  SP++
Sbjct:    68 LCQVLNGGGS-QLGINVNQTQALGLPRACNVQTPP-VSRCNTGGGGGGSTSDSPAESPNS 125

Query:   125 K-VFQGFSNLTQGHGGTPATAVGSNSKNGSP 154
                  G   +  G G  P ++ GS+ K   P
Sbjct:   126 SGPGNGSKTVPVGEGDGPPSSDGSSIKFSFP 156

GO:0005886 "plasma membrane" evidence=ISM

GO:0006869 "lipid transport" evidence=IEA;ISS

GO:0008289 "lipid binding" evidence=IEA;ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	189
cd00010	63	cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibit	8e-15
pfam14368	95	pfam14368, LTP_2, Probable lipid transfer	3e-08
pfam00234	74	pfam00234, Tryp_alpha_amyl, Protease inhibitor/see	5e-08
smart00499	79	smart00499, AAI, Plant lipid transfer protein / se	9e-07
cd01960	89	cd01960, nsLTP1, nsLTP1: Non-specific lipid-transf	2e-06
cd01959	66	cd01959, nsLTP2, nsLTP2: Non-specific lipid-transf	3e-04

>gnl|CDD|237980 cd00010, AAI_LTSS, AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

 Score = 65.5 bits (160), Expect = 8e-15
 Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 41  LATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPT 100
           LA CL Y+ G A  P  DCC GLK ++    KCLC  +       LGL  N+T A  LP 
Sbjct: 1   LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASLLGL-KNATRALALPA 59

Query: 101 ACH 103
           AC 
Sbjct: 60  ACG 62

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges. Length = 63

>gnl|CDD|222713 pfam14368, LTP_2, Probable lipid transfer

 Score = 49.0 bits (117), Expect = 3e-08
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 14  ILVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKC 73
           + VL+    A+       A CAD ++               P+  CC  LK  +     C
Sbjct: 2   LAVLLASAAAAPPAPASAASCADSLLPC--LGYCYVNGTAAPSPACCAALKAAVKADVPC 59

Query: 74  LCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSEC 111
           LC L+      + G  IN T A  LP AC   +  S+C
Sbjct: 60  LCDLVTSP--LAAGFGINLTRAVALPKACGLTSPPSKC 95

The members of this family are probably involved in lipid transfer. The family has several highly conserved cysteines, paired in various ways. Length = 95

>gnl|CDD|215810 pfam00234, Tryp_alpha_amyl, Protease inhibitor/seed storage/LTP family

 Score = 47.9 bits (114), Expect = 5e-08
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINST 93
           C   ++ LA C  Y+ G  + P+  CC  L+QL     +C C  I+       G  IN  
Sbjct: 1   CGQVLLKLAPCAGYLQGGCQVPSQQCCSQLRQL---QAQCRCTAIRAIVLGIEG--INPQ 55

Query: 94  LAANLPTAC 102
            AA+LP+ C
Sbjct: 56  AAASLPSMC 64

This family is composed of trypsin-alpha amylase inhibitors, seed storage proteins and lipid transfer proteins from plants. Length = 74

>gnl|CDD|214698 smart00499, AAI, Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

 Score = 44.7 bits (105), Expect = 9e-07
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 34  CADKVVALATCLPYVGGDAKTPTV--DCCGGLKQLLDKSKKCLCLLIKDKDDPSLG-LKI 90
           C   ++ LA CL Y+ G ++       CC  L+ L     +C CL ++      L    +
Sbjct: 1   CGQVLLQLAPCLSYLVGGSRGAPPSQQCCSQLRGLNSA--QCRCLALRAAVLGILEIPGL 58

Query: 91  NSTLAANLPTACHSPANVSEC 111
           N+  AA+LP+AC  P   ++C
Sbjct: 59  NAQNAASLPSACGVPPPYTDC 79

Length = 79

>gnl|CDD|238926 cd01960, nsLTP1, nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 11/78 (14%)

Query: 33  ECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLL-------DKSKKCLCLLIKDKDDPS 85
            C      LA CL Y+ G    P+  CC G+K L        D+   C CL    K   +
Sbjct: 2   SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCL----KSAAA 57

Query: 86  LGLKINSTLAANLPTACH 103
               +N   AA LP  C 
Sbjct: 58  GISGLNPGRAAGLPGKCG 75

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans. Length = 89

>gnl|CDD|238925 cd01959, nsLTP2, nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 38  VVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAAN 97
              L+ CLP + G +  P+  CC  LK+     + CLC   K   +PSL   +NS  A  
Sbjct: 3   PTQLSPCLPAILGGSP-PSAACCAKLKE----QQSCLCQYAK---NPSLKQYVNSPNARK 54

Query: 98  LPTACHSPA 106
           +  AC  P 
Sbjct: 55  VLAACGVPY 63

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene expression has been observed in barley and rice developing seeds, during Zinnia elegans cell differentiation, and under abiotic stress conditions in barley roots. The nsLTP2 of Brassica rapa has also been identified as a potent allergen. Length = 66

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
PF14368	96	LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A	99.51
cd01960	89	nsLTP1 nsLTP1: Non-specific lipid-transfer protein	99.5
cd04660	73	nsLTP_like nsLTP_like: Non-specific lipid-transfer	99.48
cd00010	63	AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI),	99.43
cd01959	66	nsLTP2 nsLTP2: Non-specific lipid-transfer protein	99.36
smart00499	79	AAI Plant lipid transfer protein / seed storage pr	99.06
PF00234	90	Tryp_alpha_amyl: Protease inhibitor/seed storage/L	98.63
PF14547	85	Hydrophob_seed: Hydrophobic seed protein	93.39
cd01958	85	HPS_like HPS_like: Hydrophobic Protein from Soybea	91.24

>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A

Probab=99.51  E-value=1.4e-15  Score=111.00  Aligned_cols=80  Identities=35%  Similarity=0.739  Sum_probs=49.5

Q ss_pred             ccCCcchhhhhcccCChhhhcCCCCCCChhchHHHHhhhcCCCcceeeeecCCCCCCCCCCCCHHHHhhhhccCCCCCCc
Q 029705           29 QDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANV  108 (189)
Q Consensus        29 ~~~~~C~~~l~~L~pCl~yvtg~~~~PS~~CC~~lk~v~~~~~~CLC~~ik~~~~~~l~~~IN~trA~~LP~~Cgi~~p~  108 (189)
                      ....+|.+.+....+|+.|+.++ ..|++.||+++|++.+.+..|+|.++++..  ..+++||.+|++.||++||++.|.
T Consensus        17 ~~~~~c~~~l~~c~~~~~~~~~~-~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~--~~~~~in~~~a~~Lp~~Cg~~~~~   93 (96)
T PF14368_consen   17 ACCCSCANSLLPCCPCLCYVTGG-PAPSAACCSALKSVVQADPPCLCQLLNSPG--APGFGINVTRALALPAACGVPVPP   93 (96)
T ss_dssp             -BTTB-HCCCCHH--HHHHHCC------HHHHHHHCC----HCCHHHCCCC-CC--HCHHCCTCHHHHHHHHHCTSS-S-
T ss_pred             CCcchhHHHHhccccchhccCCC-CCCCHHHHHHHHHhccCCCCCHHHhcCccc--cccCCcCHHHHHHHHHHcCCCCCC
Confidence            45567866544344448888854 689999999999998889999999888742  135689999999999999999976


Q ss_pred             Ccc
Q 029705          109 SEC  111 (189)
Q Consensus       109 s~C  111 (189)
                      ++|
T Consensus        94 ~~C   96 (96)
T PF14368_consen   94 SKC   96 (96)
T ss_dssp             ---
T ss_pred             CCC
Confidence            666

>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.50  E-value=1.5e-14  Score=105.90  Aligned_cols=73  Identities=30%  Similarity=0.627  Sum_probs=58.7

Q ss_pred             cchhhhhcccCChhhhcCCCCCCChhchHHHHhhhcC-----CCcceeeeecCCCCCCCCCC-CCHHHHhhhhccCCCCC
Q 029705           33 ECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDK-----SKKCLCLLIKDKDDPSLGLK-INSTLAANLPTACHSPA  106 (189)
Q Consensus        33 ~C~~~l~~L~pCl~yvtg~~~~PS~~CC~~lk~v~~~-----~~~CLC~~ik~~~~~~l~~~-IN~trA~~LP~~Cgi~~  106 (189)
                      +|..++..|.||++|++|++..|+++||++++++++.     +..|+|..+++..   .++. ||.+||++||++||++.
T Consensus         2 ~C~~v~~~l~~C~~y~~g~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C~~~~~---~~~~~i~~~~a~~LP~~C~v~~   78 (89)
T cd01960           2 SCGQVTSLLAPCLGYLTGGGPAPSPACCSGVKSLNGLAKTTADRQAACNCLKSAA---AGISGLNPGRAAGLPGKCGVSI   78 (89)
T ss_pred             CHHHHHhhHHhHHHHHhCCCCCCChHHhhhhHHHhhccCCCCchhhhhhcccccc---cccCCCCHHHHHhChHhcccCC
Confidence            6999999999999999988778999999999999753     2345555456532   2333 99999999999999997


Q ss_pred             Cc
Q 029705          107 NV  108 (189)
Q Consensus       107 p~  108 (189)
                      ++
T Consensus        79 ~~   80 (89)
T cd01960          79 PY   80 (89)
T ss_pred             CC
Confidence            54

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.

>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3

Probab=99.48  E-value=2.9e-14  Score=101.25  Aligned_cols=71  Identities=34%  Similarity=0.695  Sum_probs=57.4

Q ss_pred             chhhhhcccCChhhhcCCC--CCCChhchHHHHhhhcCCCcceeeeecCCCCCCCCCCCCHHHHhhhhccCCCCCCcCcc
Q 029705           34 CADKVVALATCLPYVGGDA--KTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSEC  111 (189)
Q Consensus        34 C~~~l~~L~pCl~yvtg~~--~~PS~~CC~~lk~v~~~~~~CLC~~ik~~~~~~l~~~IN~trA~~LP~~Cgi~~p~s~C  111 (189)
                      |+..+..|.+|++|+++++  ..|+..||+++|++   +..|+|.+++..   .+. .||.++|+.||+.||+++|.++|
T Consensus         1 C~~~~~~L~~C~~yl~~~~~~~~Ps~~CC~~vk~~---~~~C~C~~~~~~---~~~-~i~~~~a~~Lp~~Cgv~~p~~~C   73 (73)
T cd04660           1 CNMDLDLLAECQPYVTGPNPPPPPSRECCAALRRA---DLPCLCRYKTSL---VLQ-IIDPDKAVYLPAKCGLPLPPSSC   73 (73)
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCHHHHHHHHcC---CcCCEeeccCCC---ccc-ccCHHHHHHHHHHcCCCCCCCCC
Confidence            5666788999999999876  36899999999985   556999977642   223 49999999999999999865666

Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.

>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins

Probab=99.43  E-value=7.1e-14  Score=95.57  Aligned_cols=62  Identities=42%  Similarity=0.844  Sum_probs=52.9

Q ss_pred             ccCChhhhcCCCCCCChhchHHHHhhhcCCCcceeeeecCCCCCCCCCCC-CHHHHhhhhccCCC
Q 029705           41 LATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKI-NSTLAANLPTACHS  104 (189)
Q Consensus        41 L~pCl~yvtg~~~~PS~~CC~~lk~v~~~~~~CLC~~ik~~~~~~l~~~I-N~trA~~LP~~Cgi  104 (189)
                      |.||++|+++++..|+++||++++++.+.++.|+|+++++.....  ..+ |.++++.||++||+
T Consensus         1 L~~C~~y~~~~~~~Ps~~CC~~l~~~~~~~~~ClC~~~~~~~~~~--~~~~~~~~a~~LP~~Cgv   63 (63)
T cd00010           1 LAPCLSYLTGGATAPPSDCCSGLKSVVKSDPKCLCAALNGPGASL--LGLKNATRALALPAACGL   63 (63)
T ss_pred             CcchHHHHcCCCCCCChHHHHHHHHHHhcChhhHHHHHcCccccc--cCcccHHHHHhchHhcCC
Confidence            579999999887789999999999999889999999998754322  234 79999999999996

Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.

>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes

Probab=99.36  E-value=5e-13  Score=93.85  Aligned_cols=61  Identities=38%  Similarity=0.751  Sum_probs=52.8

Q ss_pred             hcccCChhhhcCCCCCCChhchHHHHhhhcCCCcceeeeecCCCCCCCCCCCCHHHHhhhhccCCCCCC
Q 029705           39 VALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPAN  107 (189)
Q Consensus        39 ~~L~pCl~yvtg~~~~PS~~CC~~lk~v~~~~~~CLC~~ik~~~~~~l~~~IN~trA~~LP~~Cgi~~p  107 (189)
                      .+|.+|++|++++ ..||.+||+.+|+    +..|||.|+++   +.++..||.++|++||++||+++|
T Consensus         4 ~~L~~C~~ai~~~-~~Ps~~CC~~Lk~----~~~CLC~y~~~---p~l~~~i~~~~A~~l~~~Cgv~~P   64 (66)
T cd01959           4 TQLSPCLPAILGG-SPPSAACCAKLKE----QQSCLCQYAKN---PSLKQYVNSPNARKVLAACGVPYP   64 (66)
T ss_pred             hhcccCHHHHhCC-CCCCHHHHHHHhc----CCCCeeeeecC---ccHHhhcCcHHHHHHHHHcCCCCC
Confidence            4799999999975 5799999999999    45899998876   455556999999999999999986

In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp

>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family

Probab=99.06  E-value=1.6e-10  Score=79.85  Aligned_cols=76  Identities=34%  Similarity=0.737  Sum_probs=58.7

Q ss_pred             chhhhhcccCChhhhcCC--CCCCChhchHHHHhhhcCCCcceeeeecCCCCCCCC-CCCCHHHHhhhhccCCCCCCcCc
Q 029705           34 CADKVVALATCLPYVGGD--AKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLG-LKINSTLAANLPTACHSPANVSE  110 (189)
Q Consensus        34 C~~~l~~L~pCl~yvtg~--~~~PS~~CC~~lk~v~~~~~~CLC~~ik~~~~~~l~-~~IN~trA~~LP~~Cgi~~p~s~  110 (189)
                      |...+..+.+|++|+++.  ...|+.+||++++++.  +..|+|.+++........ ..++..++..||+.||+..+++.
T Consensus         1 C~~~~~~~~~c~~~~~~~~~~~~p~~~CC~~l~~~~--~~~C~C~~~~~~~~~~~~~~~~~~~~a~~lp~~C~~~~~~~~   78 (79)
T smart00499        1 CGQVLLQLAPCLSYLTGGSPGAPPSQQCCSQLRGLN--SAQCRCLALRAAVLGILEIPGVNAQNAASLPSACGVPPPYTD   78 (79)
T ss_pred             ChhhhhhHHhhHHHHcCCCCCCCCchHHHHHHHHhc--ccCCcchhhhcccccccchhhhhHHHHHhhHHhcCCCCCCCC
Confidence            666777788999999986  4578999999999986  788999987764221110 02699999999999999986544


Q ss_pred             c
Q 029705          111 C  111 (189)
Q Consensus       111 C  111 (189)
                      |
T Consensus        79 C   79 (79)
T smart00499       79 C   79 (79)
T ss_pred             C
Confidence            4

>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]

Probab=98.63  E-value=4.6e-10  Score=81.37  Aligned_cols=70  Identities=33%  Similarity=0.754  Sum_probs=54.8

Q ss_pred             hcccCChhhhcCCCCCCChhchHHHHhhhcCCCcceeeeecCCCCCC--------CCCCCCHHHHhhhhccCCCCCCcCc
Q 029705           39 VALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPS--------LGLKINSTLAANLPTACHSPANVSE  110 (189)
Q Consensus        39 ~~L~pCl~yvtg~~~~PS~~CC~~lk~v~~~~~~CLC~~ik~~~~~~--------l~~~IN~trA~~LP~~Cgi~~p~s~  110 (189)
                      ..+.+|..|++++...|+..||++|+++   +..|.|..|+......        ....++..+|..||+.||++.++++
T Consensus        13 ~~l~~c~~~~~~~~~~~~~~CC~~L~~l---~~~C~C~~i~~~~~~~~~q~~~~~~~~~~~~~~a~~LP~~C~v~~~~~~   89 (90)
T PF00234_consen   13 VRLSPCLPYLQGGCQQPSQQCCQQLRQL---DPQCRCEAIRQMVRQVIQQQQQGGQEMQIMAQRAQNLPSMCNVSPPYTD   89 (90)
T ss_dssp             SHHHGGHHHHTTSSSHHHHHHHHHHHHH---HHHHHHHHHHHHHHHSHHCTSTCSHHHHHHHHHHHHHHHHTTSSSSSS-
T ss_pred             ccccccHHHHhcccccchHHHhHHHHHH---hHHhhCHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            4489999999987667999999999998   7799999876531110        0125899999999999999987655


Q ss_pred             c
Q 029705          111 C  111 (189)
Q Consensus       111 C  111 (189)
                      |
T Consensus        90 C   90 (90)
T PF00234_consen   90 C   90 (90)
T ss_dssp             G
T ss_pred             C
Confidence            5

The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....

>PF14547 Hydrophob_seed: Hydrophobic seed protein

Probab=93.39  E-value=0.024  Score=41.74  Aligned_cols=72  Identities=29%  Similarity=0.538  Sum_probs=47.2

Q ss_pred             hhcccCChhhhc----CCCCCCChhchHHHHhhhcCC-CcceeeeecCCCCCCCC-CCCCHHHHh-hhhccCCCCCCc-C
Q 029705           38 VVALATCLPYVG----GDAKTPTVDCCGGLKQLLDKS-KKCLCLLIKDKDDPSLG-LKINSTLAA-NLPTACHSPANV-S  109 (189)
Q Consensus        38 l~~L~pCl~yvt----g~~~~PS~~CC~~lk~v~~~~-~~CLC~~ik~~~~~~l~-~~IN~trA~-~LP~~Cgi~~p~-s  109 (189)
                      ..+|.-|.+.+.    ..+..+..+||.-++.+.+.+ ..|||..+|..   .++ +++|....+ .|-..||...|. +
T Consensus         6 ~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~AA~CLC~aika~---vlg~i~~~ipv~l~~lln~CGk~~p~gf   82 (85)
T PF14547_consen    6 ALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDAAVCLCTAIKAN---VLGLINVNIPVALNLLLNACGKTVPSGF   82 (85)
T ss_pred             chhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchHHHHHHHHHhhh---cccccccccccHHHHHHHHhCCcCcCCC
Confidence            345677777761    112346789999999998754 57999988753   245 444454444 456789988743 6


Q ss_pred             ccc
Q 029705          110 ECI  112 (189)
Q Consensus       110 ~C~  112 (189)
                      +|+
T Consensus        83 ~C~   85 (85)
T PF14547_consen   83 TCP   85 (85)
T ss_pred             cCC
Confidence            774

>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins

Probab=91.24  E-value=0.21  Score=36.86  Aligned_cols=75  Identities=28%  Similarity=0.549  Sum_probs=48.4

Q ss_pred             chhhhhcccCChhhhcCC----CCCCChhchHHHHhhhcCC-CcceeeeecCCCCCCCCCCCCHHHHhhh-hccCCCCCC
Q 029705           34 CADKVVALATCLPYVGGD----AKTPTVDCCGGLKQLLDKS-KKCLCLLIKDKDDPSLGLKINSTLAANL-PTACHSPAN  107 (189)
Q Consensus        34 C~~~l~~L~pCl~yvtg~----~~~PS~~CC~~lk~v~~~~-~~CLC~~ik~~~~~~l~~~IN~trA~~L-P~~Cgi~~p  107 (189)
                      |-....+|.-|.+-+..-    +..|..+||.-++.+.+-+ ..|+|..+|..   .+++.+|....+.+ -..||-..|
T Consensus         4 CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldAA~CLCtaikan---~lgi~~~~pv~l~llln~CGk~~P   80 (85)
T cd01958           4 CPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDAAVCLCTAIKAN---ILGISINIPVALSLLLNSCGRNVP   80 (85)
T ss_pred             CCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhheeeeeeeeeecc---ccCcccccChhHHHHHHHHcCcCC
Confidence            443444566666655321    2357789999999997754 57999988852   35666656656554 467888775


Q ss_pred             c-Ccc
Q 029705          108 V-SEC  111 (189)
Q Consensus       108 ~-s~C  111 (189)
                      . ++|
T Consensus        81 ~gf~C   85 (85)
T cd01958          81 PGFTC   85 (85)
T ss_pred             CCCcC
Confidence            3 444

In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	189
1afh_A	93	Maize nonspecific lipid transfer protein; lipid-bi	4e-12
1bwo_A	90	NS-LTP1, nonspecific lipid-transfer protein; wheat	8e-08
1siy_A	91	LTP 1, NS-LTP1, nonspecific lipid-transfer protein	9e-08
2alg_A	92	Non-specific lipid transfer protein; LTP, NS-LTP,	5e-07
1t12_A	91	LTP 1, nonspecific lipid-transfer protein 1; cyste	7e-07
1l6h_A	69	LTP2, non-specific lipid transfer protein; NSLTP2,	4e-05
1n89_A	67	Lipid transfer protein; lipid transport; HET: PGM;	8e-05

>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A* Length = 93

 Score = 58.7 bits (142), Expect = 4e-12
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 7/75 (9%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSK-----KCLCLLIKDKDDPSLGL 88
           C     A+A C+ Y  G    P+  CC G++ L + ++     +  C  +K+      G 
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSG- 62

Query: 89  KINSTLAANLPTACH 103
            +N+  AA++P+ C 
Sbjct: 63  -LNAGNAASIPSKCG 76

>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A* Length = 90

 Score = 47.1 bits (112), Expect = 8e-08
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSK-----KCLCLLIKDKDDPSLGL 88
           C      +  CL YV G    P+  CC G+K L ++++     +  C  +K         
Sbjct: 3   CGHVDSLVRPCLSYVQGGPG-PSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHN- 60

Query: 89  KINSTLAANLPTACH 103
            +N   A ++P  C 
Sbjct: 61  -LNEDNARSIPPKCG 74

>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var} Length = 91

 Score = 47.2 bits (112), Expect = 9e-08
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKS-----KKCLCLLIKDKDDPSLGL 88
           C      LA C+ ++      P   CC G+K +L+ S     ++ +C  +K       G 
Sbjct: 3   CGQVQGNLAQCIGFLQKGGVVP-PSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRG- 60

Query: 89  KINSTLAANLPTACH 103
            IN   A  LP  C 
Sbjct: 61  -INPNNAEALPGKCG 74

>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A* Length = 92

 Score = 45.2 bits (107), Expect = 5e-07
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 12/77 (15%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLL-------DKSKKCLCLLIKDKDDPSL 86
           C     +LA C+PYV G    P   CC G++ +        D+   C CL    K   + 
Sbjct: 4   CGQVSSSLAPCIPYVRGGGAVP-PACCNGIRNVNNLARTTPDRQAACNCL----KQLSAS 58

Query: 87  GLKINSTLAANLPTACH 103
              +N   AA LP  C 
Sbjct: 59  VPGVNPNNAAALPGKCG 75

>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum} Length = 91

 Score = 44.8 bits (106), Expect = 7e-07
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSK-----KCLCLLIKDKDDPSLGL 88
           C      LA CL Y+          CCGG+K L++ ++     +  C  +K       G 
Sbjct: 4   CGQVTSNLAPCLAYLRNTGPLGR--CCGGVKALVNSARTTEDRQIACTCLKSAAGAISG- 60

Query: 89  KINSTLAANLPTACH 103
            IN   AA LP+ C 
Sbjct: 61  -INLGKAAGLPSTCG 74

>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1 Length = 69

 Score = 39.4 bits (92), Expect = 4e-05
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 38  VVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAAN 97
              L  C   + G A+ PT  CC  L+      + C C   KD   P  G  +NS  A  
Sbjct: 5   AGQLTVCTGAIAGGAR-PTAACCSSLRA----QQGCFCQFAKD---PRYGRYVNSPNARK 56

Query: 98  LPTACHSP 105
             ++C   
Sbjct: 57  AVSSCGIA 64

>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A* Length = 67

 Score = 38.3 bits (89), Expect = 8e-05
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 38  VVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAAN 97
              LA C   +   AK P+ +CCG L+      + C C   KD   P+ G  I S  A +
Sbjct: 4   ASQLAVCASAILSGAK-PSGECCGNLRA----QQGCFCQYAKD---PTYGQYIRSPHARD 55

Query: 98  LPTACHSP 105
             T+C   
Sbjct: 56  TLTSCGLA 63

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	189
d1fk5a_	93	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	2e-13
d1mida_	91	a.52.1.1 (A:) Plant non-specific lipid-transfer pr	4e-12
d1l6ha_	69	a.52.1.1 (A:) Non-specific lipid-transfer protein	4e-05
d1tuka1	67	a.52.1.1 (A:1-67) Non-specific lipid-transfer prot	1e-04

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]} Length = 93

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

 Score = 61.0 bits (148), Expect = 2e-13
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSK-----KCLCLLIKDKDDPSLGL 88
           C     A+A C+ Y  G    P+  CC G++ L + ++     +  C  +K+      G 
Sbjct: 4   CGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSG- 62

Query: 89  KINSTLAANLPTAC--HSPANVSECIN 113
            +N+  AA++P+ C    P  +S   +
Sbjct: 63  -LNAGNAASIPSKCGVSIPYTISTSTD 88

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 91

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 57.5 bits (139), Expect = 4e-12
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 10/87 (11%)

Query: 34  CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSK-----KCLCLLIKDKDDPSLGL 88
           C      +  CL YV G    P+ +CC G++ L ++++     + +C  +K         
Sbjct: 3   CGQVDSKMKPCLTYVQGGP-GPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIA--RGIH 59

Query: 89  KINSTLAANLPTAC--HSPANVSECIN 113
            +N   AA++P+ C  + P  +S  I+
Sbjct: 60  NLNLNNAASIPSKCNVNVPYTISPDID 86

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]} Length = 69

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 38  VVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAAN 97
              L  C   + G A+ PT  CC  L+      + C C   KD   P  G  +NS  A  
Sbjct: 5   AGQLTVCTGAIAGGAR-PTAACCSSLRA----QQGCFCQFAKD---PRYGRYVNSPNARK 56

Query: 98  LPTACHSP 105
             ++C   
Sbjct: 57  AVSSCGIA 64

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]} Length = 67

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 38  VVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAAN 97
              LA C   +   AK P+ +CCG L+      + C C   KD   P+ G  I S  A +
Sbjct: 4   ASQLAVCASAILSGAK-PSGECCGNLRA----QQGCFCQYAKD---PTYGQYIRSPHARD 55

Query: 98  LPTACHSP 105
             T+C   
Sbjct: 56  TLTSCGLA 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d1fk5a_	93	Plant non-specific lipid-transfer protein (ns-LTP,	99.7
d1mida_	91	Plant non-specific lipid-transfer protein (ns-LTP,	99.65
d1tuka1	67	Non-specific lipid-transfer protein homologue (ns-	99.17
d1l6ha_	69	Non-specific lipid-transfer protein homologue (ns-	99.17
d1hypa_	75	Soybean hydrophobic protein {Soybean (Glycine max)	91.63
g1pnb.1	106	Napin BNIb {Rape (Brassica napus) [TaxId: 3708]}	90.33
d1s6da_	103	Methionine-rich 2S protein (albumin 8) {Common sun	89.52
d1psya_	125	2S albumin RicC3 {Castor bean (Ricinus communis) [	87.85

>d1fk5a_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Maize (Zea mays) [TaxId: 4577]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Maize (Zea mays) [TaxId: 4577]

Probab=99.70  E-value=2.5e-19  Score=112.17  Aligned_cols=82  Identities=23%  Similarity=0.599  Sum_probs=67.4

Q ss_pred             CCCCHHHHHCCCCCHHHHCCCCCCCCHHCHHHHHHHHC-----CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             78614521032177554319999988200399886234-----8985044520289999778788988983310568999
Q 029705           31 KAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLD-----KSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSP  105 (189)
Q Consensus        31 ~~~C~~~l~~LapClpYvtg~~~~PS~~CCs~lk~v~~-----~~~~CLC~lik~~~~~~lg~~IN~trA~~LP~~Cgi~  105 (189)
                      +.+|.+++..|+||++|++|++..|++.||++++++++     .++.|+|..+++....  ..+||.+|+..||++||++
T Consensus         1 Ai~C~~v~~~l~pCl~Yltg~~~~Ps~~CC~gv~~l~~~a~t~~dr~~lC~cl~~~~~~--~~~in~~ra~~LP~~C~v~   78 (93)
T d1fk5a_           1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG--VSGLNAGNAASIPSKCGVS   78 (93)
T ss_dssp             CCCHHHHHHHHGGGHHHHTTCSSSCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHT--CTTCCHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC--CCCCCHHHHHHHHHHCCCC
T ss_conf             98888988776200988818999999735688999998825776488999826513455--6785889998335744789


Q ss_pred             CCC-----CCCCCC
Q ss_conf             985-----755545
Q 029705          106 ANV-----SECINL  114 (189)
Q Consensus       106 ~p~-----s~C~~~  114 (189)
                      +|+     ++|+++
T Consensus        79 l~~pis~~~dCs~i   92 (93)
T d1fk5a_          79 IPYTISTSTDCSRV   92 (93)
T ss_dssp             CSSCCSTTCCGGGC
T ss_pred             CCCCCCCCCCCCCC
T ss_conf             99998878887767

>d1mida_ a.52.1.1 (A:) Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) {Barley (Hordeum vulgare) [TaxId: 4513]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1)
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=99.65  E-value=7e-18  Score=105.04  Aligned_cols=80  Identities=24%  Similarity=0.575  Sum_probs=65.4

Q ss_pred             CCCHHHHHCCCCCHHHHCCCCCCCCHHCHHHHHHHHCC-----CCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             86145210321775543199999882003998862348-----9850445202899997787889889833105689999
Q 029705           32 AECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDK-----SKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPA  106 (189)
Q Consensus        32 ~~C~~~l~~LapClpYvtg~~~~PS~~CCs~lk~v~~~-----~~~CLC~lik~~~~~~lg~~IN~trA~~LP~~Cgi~~  106 (189)
                      .+|.+++..|+||++|++|+ ..|+..||++++++++.     ++.|+|..+++...  ...+||.+|+..||.+||++.
T Consensus         1 i~C~~v~~~l~pCl~Yl~g~-~~P~~~CC~gv~~L~~~a~t~~d~~~lC~cl~~~~~--~~~~in~~ra~~LP~~C~v~~   77 (91)
T d1mida_           1 LNCGQVDSKMKPCLTYVQGG-PGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIAR--GIHNLNLNNAASIPSKCNVNV   77 (91)
T ss_dssp             CCHHHHHHHHGGGHHHHTTC-SCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH--TCTTCCHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC--CCCCCCHHHHHHCHHHCCCCC
T ss_conf             97888998887569998189-999930336599999880588869999883553143--577869899981567448899


Q ss_pred             CC-----CCCCCC
Q ss_conf             85-----755545
Q 029705          107 NV-----SECINL  114 (189)
Q Consensus       107 p~-----s~C~~~  114 (189)
                      |+     ++|+++
T Consensus        78 p~pis~~~dC~~i   90 (91)
T d1mida_          78 PYTISPDIDCSRI   90 (91)
T ss_dssp             CSCCCTTCCGGGC
T ss_pred             CCCCCCCCCCCCC
T ss_conf             9998888888777

>d1tuka1 a.52.1.1 (A:1-67) Non-specific lipid-transfer protein homologue (ns-LTP2) {Triticum turgidum [TaxId: 4571]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Triticum turgidum [TaxId: 4571]

Probab=99.17  E-value=9.4e-13  Score=79.64  Aligned_cols=64  Identities=33%  Similarity=0.681  Sum_probs=56.6

Q ss_pred             CHHHHHCCCCCHHHHCCCCCCCCHHCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             14521032177554319999988200399886234898504452028999977878898898331056899998
Q 029705           34 CADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPAN  107 (189)
Q Consensus        34 C~~~l~~LapClpYvtg~~~~PS~~CCs~lk~v~~~~~~CLC~lik~~~~~~lg~~IN~trA~~LP~~Cgi~~p  107 (189)
                      |+.  ++|.+|++.++++. .||.+||+.||+    |..|||+++||   |.+...||..+|..+-++||+++|
T Consensus         2 C~p--~~L~~C~~Ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~kd---P~~~~yv~spnarkv~~aCgvp~P   65 (67)
T d1tuka1           2 CQA--SQLAVCASAILSGA-KPSGECCGNLRA----QQGCFCQYAKD---PTYGQYIRSPHARDTLTSCGLAVP   65 (67)
T ss_dssp             CCG--GGGGGGHHHHHHCC-CCCHHHHHHHHH----HGGGHHHHTTC---TTTHHHHTSHHHHHHHHHTTCCCC
T ss_pred             CCH--HHCCCCHHHHHCCC-CCCHHHHHHHHH----CCCCCCEECCC---CCHHHHCCCHHHHHHHHHCCCCCC
T ss_conf             881--01332688885699-985999998984----48721101278---229987279989999996389899

>d1l6ha_ a.52.1.1 (A:) Non-specific lipid-transfer protein homologue (ns-LTP2) {Rice (Oryza sativa) [TaxId: 4530]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Non-specific lipid-transfer protein homologue (ns-LTP2)
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.17  E-value=6e-13  Score=80.61  Aligned_cols=67  Identities=31%  Similarity=0.694  Sum_probs=58.4

Q ss_pred             CCHHHHHCCCCCHHHHCCCCCCCCHHCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf             6145210321775543199999882003998862348985044520289999778788988983310568999985755
Q 029705           33 ECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSEC  111 (189)
Q Consensus        33 ~C~~~l~~LapClpYvtg~~~~PS~~CCs~lk~v~~~~~~CLC~lik~~~~~~lg~~IN~trA~~LP~~Cgi~~p~s~C  111 (189)
                      .|+.  ..|.+|++.++++. .||.+||+.||+    |..|||+++||   |.+...||..++..+-..||+++|  .|
T Consensus         2 ~C~p--~~L~~C~~ai~~g~-~PS~~CC~kLke----Q~~ClC~Y~k~---P~~~~yv~spnarkv~~aCgvp~P--~C   68 (69)
T d1l6ha_           2 GCNA--GQLTVCTGAIAGGA-RPTAACCSSLRA----QQGCFCQFAKD---PRYGRYVNSPNARKAVSSCGIALP--TC   68 (69)
T ss_dssp             CSTT--TTHHHHHHHHTTCC-STTHHHHHHHHH----HHHHHHHHTTC---SSHHHHTTTTTGGGCCCCCSSCSC--CC
T ss_pred             CCCH--HHCCCCHHHHHCCC-CCCHHHHHHHHH----CCCCCCEECCC---CCHHHHCCCHHHHHHHHHCCCCCC--CC
T ss_conf             9882--01243678884799-980999999985----38721302268---229887279989999996299998--88

>d1hypa_ a.52.1.1 (A:) Soybean hydrophobic protein {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Plant lipid-transfer and hydrophobic proteins
domain: Soybean hydrophobic protein
species: Soybean (Glycine max) [TaxId: 3847]

Probab=91.63  E-value=0.011  Score=29.74  Aligned_cols=67  Identities=27%  Similarity=0.591  Sum_probs=46.1

Q ss_pred             CCCCCHHHHCCCCCCCCHHCHHHHHHHHCC-CCCCEEEEECCCCCCCCCCCCCHHHHHH-HHCCCCCCCC-CCCCCC
Q ss_conf             321775543199999882003998862348-9850445202899997787889889833-1056899998-575554
Q 029705           40 ALATCLPYVGGDAKTPTVDCCGGLKQLLDK-SKKCLCLLIKDKDDPSLGLKINSTLAAN-LPTACHSPAN-VSECIN  113 (189)
Q Consensus        40 ~LapClpYvtg~~~~PS~~CCs~lk~v~~~-~~~CLC~lik~~~~~~lg~~IN~trA~~-LP~~Cgi~~p-~s~C~~  113 (189)
                      +|.-|.+-+.+-. .+...||.-++.+.+- ...|||..||-     .++ +|....+. |-..||...| -++|++
T Consensus         5 Klg~C~nvLg~~~-~~~~~CC~Ll~GL~dleAAvCLCtaika-----~~l-lnvpv~l~llln~Cgk~~P~gF~CP~   74 (75)
T d1hypa_           5 DLSICLNILGGSL-GTVDDCCALIGGLGDIEAIVCLCIQLRA-----LGI-LNLNRNLQLILNSCGRSYPSNATCPR   74 (75)
T ss_dssp             CCGGGGGGGGTCC-TTHHHHHHHHHTSCHHHHHHHHHHHHHH-----HTC-SCHHHHHHHHHHHTTCSSCCCCCCSC
T ss_pred             CHHHHHHHHCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHH-----HHH-CCCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf             4046999866766-7778863687637888999999999998-----631-41530099999981894909891899

>d1s6da_ a.52.1.3 (A:) Methionine-rich 2S protein (albumin 8) {Common sunflower (Helianthus annuus) [TaxId: 4232]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: Methionine-rich 2S protein (albumin 8)
species: Common sunflower (Helianthus annuus) [TaxId: 4232]

Probab=89.52  E-value=0.016  Score=29.04  Aligned_cols=74  Identities=24%  Similarity=0.441  Sum_probs=49.5

Q ss_pred             CCCCCHHHHH---CCCCCHHHHCC-----CCC------CCC-HHCHHHHHHHHCCCCCCEEEEECCCCCCCCCC---CCC
Q ss_conf             3786145210---32177554319-----999------988-20039988623489850445202899997787---889
Q 029705           30 DKAECADKVV---ALATCLPYVGG-----DAK------TPT-VDCCGGLKQLLDKSKKCLCLLIKDKDDPSLGL---KIN   91 (189)
Q Consensus        30 ~~~~C~~~l~---~LapClpYvtg-----~~~------~PS-~~CCs~lk~v~~~~~~CLC~lik~~~~~~lg~---~IN   91 (189)
                      ....|...+.   .|..|..|+..     +..      .+. ..||+.|+++   ++.|.|..|+......++.   .--
T Consensus         7 ~~q~C~~q~q~qq~L~~Cq~Yl~q~~~~~~~~~~~~~~e~~~~~CC~qL~q~---~~~CrC~~L~~avq~q~~q~~~~~~   83 (103)
T d1s6da_           7 TESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQV   83 (103)
T ss_dssp             CSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHS---CGGGSSHHHHHHTTSTTCSSTHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC---CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             6342799999868589999999999860677787557568999999999808---9777277999999988868999999


Q ss_pred             HHHHHHHHCCCCCCC
Q ss_conf             889833105689999
Q 029705           92 STLAANLPTACHSPA  106 (189)
Q Consensus        92 ~trA~~LP~~Cgi~~  106 (189)
                      ...|..||..||+..
T Consensus        84 ~q~Ak~LPs~C~i~P   98 (103)
T d1s6da_          84 MSMAHNLPIECNLMS   98 (103)
T ss_dssp             HHHHHHHHHHTTSSS
T ss_pred             HHHHHHCHHHCCCCC
T ss_conf             999985737329897

>d1psya_ a.52.1.3 (A:) 2S albumin RicC3 {Castor bean (Ricinus communis) [TaxId: 3988]}

class: All alpha proteins
fold: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
superfamily: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
family: Seed storage protein, 2S albumin
domain: 2S albumin RicC3
species: Castor bean (Ricinus communis) [TaxId: 3988]

Probab=87.85  E-value=0.013  Score=29.39  Aligned_cols=75  Identities=21%  Similarity=0.457  Sum_probs=48.1

Q ss_pred             CCCCCHHHH--HCCCCCHHHHCCCCC-----CC-----C-----------HHCHHHHHHHHCCCCCCEEEEECCCCCC--
Q ss_conf             378614521--032177554319999-----98-----8-----------2003998862348985044520289999--
Q 029705           30 DKAECADKV--VALATCLPYVGGDAK-----TP-----T-----------VDCCGGLKQLLDKSKKCLCLLIKDKDDP--   84 (189)
Q Consensus        30 ~~~~C~~~l--~~LapClpYvtg~~~-----~P-----S-----------~~CCs~lk~v~~~~~~CLC~lik~~~~~--   84 (189)
                      ....|...+  ..|..|..||.-...     .+     .           ..||.-|+.+   .+.|.|..|+.....  
T Consensus        14 ~~q~Crqe~q~q~L~sCq~Yl~qq~~~~~~~~~~~~~~~~~~~~~e~~~l~qCC~qL~q~---~~~CrC~~l~~~v~~~~   90 (125)
T d1psya_          14 SSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV---RDECQCEAIKYIAEDQI   90 (125)
T ss_dssp             SSSSHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTC---CSSHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC---CCCCCCHHHHHHHHHHH
T ss_conf             563477789765189999999999732478873112432112442417799999999848---96776899999999999


Q ss_pred             ----CCCCCC--CHHHHHHHHCCCCCCCC
Q ss_conf             ----778788--98898331056899998
Q 029705           85 ----SLGLKI--NSTLAANLPTACHSPAN  107 (189)
Q Consensus        85 ----~lg~~I--N~trA~~LP~~Cgi~~p  107 (189)
                          ..+..+  -..+|..||..||+...
T Consensus        91 qq~~~~~~~~~~~~q~Ak~LPs~C~i~~~  119 (125)
T d1psya_          91 QQGQLHGEESERVAQRAGEIVSSCGVRCM  119 (125)
T ss_dssp             HHTTCCTTCSHHHHHHHHHHHHHHTCSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCHHHCCCCCH
T ss_conf             98877789999999999857142299505