Query 029711
Match_columns 189
No_of_seqs 179 out of 1489
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 02:28:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029711.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029711hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02954 phosphoserine phospha 99.9 3.9E-21 8.3E-26 157.4 13.2 117 72-188 1-117 (224)
2 KOG1615 Phosphoserine phosphat 99.8 4.3E-20 9.2E-25 149.7 11.7 116 74-189 7-122 (227)
3 TIGR00338 serB phosphoserine p 99.7 1.9E-16 4.1E-21 129.2 12.0 111 76-188 7-118 (219)
4 COG0560 SerB Phosphoserine pho 99.7 4.1E-16 8.9E-21 128.9 10.8 108 81-189 3-111 (212)
5 PRK09552 mtnX 2-hydroxy-3-keto 99.6 2.2E-15 4.7E-20 123.9 11.7 104 83-188 3-107 (219)
6 PRK11133 serB phosphoserine ph 99.6 2.9E-15 6.3E-20 131.0 11.7 107 80-188 107-214 (322)
7 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.6 1.8E-14 3.8E-19 115.3 11.7 105 82-188 3-113 (201)
8 TIGR01488 HAD-SF-IB Haloacid D 99.6 3.7E-14 8E-19 111.4 11.3 103 85-188 1-106 (177)
9 PLN02770 haloacid dehalogenase 99.5 7.7E-14 1.7E-18 117.0 10.9 118 68-187 7-140 (248)
10 TIGR03333 salvage_mtnX 2-hydro 99.5 1.3E-13 2.8E-18 113.1 11.1 101 86-188 2-103 (214)
11 TIGR03351 PhnX-like phosphonat 99.4 1.2E-12 2.6E-17 106.7 12.1 104 83-188 1-120 (220)
12 COG0637 Predicted phosphatase/ 99.4 8.7E-13 1.9E-17 109.3 11.4 105 82-187 1-118 (221)
13 PLN03243 haloacid dehalogenase 99.4 9.1E-13 2E-17 111.9 11.5 105 80-187 21-141 (260)
14 PRK11587 putative phosphatase; 99.4 1.5E-12 3.3E-17 106.7 11.1 100 82-185 2-113 (218)
15 PRK13288 pyrophosphatase PpaX; 99.4 8.7E-13 1.9E-17 107.4 9.2 101 82-187 2-114 (214)
16 PRK13226 phosphoglycolate phos 99.4 1.7E-12 3.7E-17 107.4 10.1 105 80-186 9-126 (229)
17 TIGR01489 DKMTPPase-SF 2,3-dik 99.4 3.2E-12 7E-17 101.0 10.8 101 85-188 3-105 (188)
18 TIGR02137 HSK-PSP phosphoserin 99.4 2.4E-12 5.2E-17 105.7 9.9 97 84-189 2-101 (203)
19 COG0546 Gph Predicted phosphat 99.4 2.4E-12 5.2E-17 106.2 9.9 106 81-188 2-122 (220)
20 PRK13225 phosphoglycolate phos 99.4 2.6E-12 5.6E-17 109.9 9.7 104 82-188 61-175 (273)
21 PLN02575 haloacid dehalogenase 99.4 5.7E-12 1.2E-16 112.4 11.9 105 81-187 129-248 (381)
22 PRK13582 thrH phosphoserine ph 99.4 4.6E-12 1E-16 102.1 10.3 97 83-188 1-100 (205)
23 TIGR02009 PGMB-YQAB-SF beta-ph 99.4 1.2E-11 2.5E-16 97.8 11.7 95 83-180 1-113 (185)
24 TIGR01449 PGP_bact 2-phosphogl 99.4 6.4E-12 1.4E-16 101.6 10.4 100 86-187 1-117 (213)
25 PRK10826 2-deoxyglucose-6-phos 99.3 1.5E-11 3.2E-16 100.8 12.3 106 81-188 5-125 (222)
26 PRK13478 phosphonoacetaldehyde 99.3 1.6E-11 3.6E-16 103.7 12.0 103 81-187 2-133 (267)
27 TIGR01422 phosphonatase phosph 99.3 1.6E-11 3.5E-16 102.6 11.8 101 83-187 2-131 (253)
28 PRK13222 phosphoglycolate phos 99.3 1.8E-11 3.9E-16 99.6 11.5 106 81-188 4-126 (226)
29 PRK13223 phosphoglycolate phos 99.3 1.5E-11 3.2E-16 104.8 10.3 105 81-187 11-133 (272)
30 PRK06698 bifunctional 5'-methy 99.3 1.3E-11 2.7E-16 112.3 9.7 106 81-188 239-363 (459)
31 PRK11590 hypothetical protein; 99.3 1.8E-11 3.8E-16 100.4 9.5 104 82-188 5-129 (211)
32 PLN02940 riboflavin kinase 99.3 5.2E-11 1.1E-15 106.3 11.8 104 81-187 9-125 (382)
33 PRK10725 fructose-1-P/6-phosph 99.3 8E-11 1.7E-15 93.5 11.6 104 79-187 1-118 (188)
34 TIGR01990 bPGM beta-phosphoglu 99.3 7.2E-11 1.6E-15 93.3 11.1 94 85-181 1-113 (185)
35 PRK10563 6-phosphogluconate ph 99.3 8.6E-11 1.9E-15 96.0 11.8 101 82-187 3-117 (221)
36 PRK14988 GMP/IMP nucleotidase; 99.2 5.9E-11 1.3E-15 98.3 10.8 35 153-187 91-125 (224)
37 TIGR01454 AHBA_synth_RP 3-amin 99.2 4.1E-11 8.9E-16 96.9 8.7 98 86-187 1-107 (205)
38 TIGR02253 CTE7 HAD superfamily 99.2 1.4E-10 3E-15 94.4 10.8 33 154-186 93-125 (221)
39 COG4359 Uncharacterized conser 99.2 1.6E-10 3.5E-15 93.5 10.7 104 83-188 2-106 (220)
40 PF06888 Put_Phosphatase: Puta 99.2 1.9E-10 4.1E-15 96.7 10.5 100 85-188 2-106 (234)
41 PLN02779 haloacid dehalogenase 99.2 9.2E-11 2E-15 100.7 8.8 34 154-187 143-176 (286)
42 TIGR02252 DREG-2 REG-2-like, H 99.2 3.3E-10 7.1E-15 91.3 11.0 100 84-183 1-133 (203)
43 TIGR01428 HAD_type_II 2-haloal 99.2 4.9E-10 1.1E-14 90.0 11.5 105 83-187 1-124 (198)
44 PRK09449 dUMP phosphatase; Pro 99.1 6.1E-10 1.3E-14 91.0 11.6 103 82-187 2-126 (224)
45 TIGR01545 YfhB_g-proteo haloac 99.1 3E-10 6.6E-15 93.6 9.0 107 82-189 4-129 (210)
46 TIGR02254 YjjG/YfnB HAD superf 99.1 4.9E-10 1.1E-14 90.9 9.8 104 83-187 1-128 (224)
47 TIGR01548 HAD-SF-IA-hyp1 haloa 99.1 3.7E-10 7.9E-15 91.1 8.9 103 85-188 2-139 (197)
48 KOG2914 Predicted haloacid-hal 99.1 8.6E-10 1.9E-14 92.0 11.1 104 79-185 6-122 (222)
49 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.1 3.8E-10 8.2E-15 90.7 8.3 104 85-188 1-120 (202)
50 TIGR02247 HAD-1A3-hyp Epoxide 99.1 4.3E-10 9.4E-15 91.2 8.6 30 153-182 92-121 (211)
51 PRK09456 ?-D-glucose-1-phospha 99.1 8.4E-10 1.8E-14 89.2 9.8 102 84-185 1-114 (199)
52 PLN02919 haloacid dehalogenase 99.1 6.8E-10 1.5E-14 110.2 10.5 107 78-187 70-193 (1057)
53 PHA02597 30.2 hypothetical pro 99.0 1.8E-09 3.8E-14 86.9 8.8 95 82-182 1-100 (197)
54 PF13419 HAD_2: Haloacid dehal 99.0 5.4E-10 1.2E-14 85.9 5.2 99 86-187 1-109 (176)
55 TIGR01549 HAD-SF-IA-v1 haloaci 98.9 4.2E-09 9.2E-14 81.1 8.3 91 85-187 1-96 (154)
56 TIGR01672 AphA HAD superfamily 98.9 3.8E-09 8.3E-14 88.9 8.5 98 69-187 46-150 (237)
57 TIGR01509 HAD-SF-IA-v3 haloaci 98.9 5.9E-09 1.3E-13 81.7 7.6 31 154-184 84-114 (183)
58 TIGR01993 Pyr-5-nucltdase pyri 98.8 1.2E-08 2.6E-13 81.1 8.0 95 84-187 1-113 (184)
59 PRK10748 flavin mononucleotide 98.8 4.1E-08 9E-13 81.7 10.1 29 154-183 112-140 (238)
60 TIGR01493 HAD-SF-IA-v2 Haloaci 98.8 3.3E-08 7.2E-13 77.7 8.1 96 85-187 1-115 (175)
61 KOG3120 Predicted haloacid deh 98.7 1E-07 2.2E-12 79.3 10.0 103 82-188 12-118 (256)
62 PF12710 HAD: haloacid dehalog 98.7 1.8E-08 4E-13 79.7 4.4 32 158-189 92-123 (192)
63 PLN02811 hydrolase 98.6 2.8E-07 6.1E-12 75.6 9.8 92 90-184 1-107 (220)
64 cd01427 HAD_like Haloacid deha 98.5 9.4E-08 2E-12 69.9 4.5 35 154-188 23-57 (139)
65 PRK08238 hypothetical protein; 98.5 2.3E-07 5E-12 85.3 6.8 92 85-188 12-105 (479)
66 COG1011 Predicted hydrolase (H 98.4 2.7E-06 5.8E-11 69.1 9.3 32 154-186 98-129 (229)
67 TIGR01681 HAD-SF-IIIC HAD-supe 98.3 7.6E-07 1.6E-11 67.7 5.2 33 155-187 29-62 (128)
68 PRK11009 aphA acid phosphatase 98.2 3.7E-06 7.9E-11 70.9 6.2 29 153-181 112-140 (237)
69 TIGR01662 HAD-SF-IIIA HAD-supe 98.2 3.7E-06 8E-11 63.4 5.6 27 155-181 25-51 (132)
70 TIGR01684 viral_ppase viral ph 98.1 3.3E-06 7.2E-11 73.2 5.3 31 157-187 148-178 (301)
71 TIGR01544 HAD-SF-IE haloacid d 98.1 1.8E-05 3.9E-10 68.2 9.6 48 141-188 107-154 (277)
72 TIGR01533 lipo_e_P4 5'-nucleot 98.1 1.3E-05 2.9E-10 68.6 8.7 74 81-183 73-146 (266)
73 TIGR01685 MDP-1 magnesium-depe 98.1 6.7E-07 1.5E-11 72.0 0.5 34 153-186 43-77 (174)
74 PHA03398 viral phosphatase sup 98.0 6.4E-06 1.4E-10 71.5 5.1 31 157-187 150-180 (303)
75 TIGR01664 DNA-3'-Pase DNA 3'-p 98.0 6.2E-06 1.3E-10 65.6 4.3 28 155-182 42-69 (166)
76 TIGR01691 enolase-ppase 2,3-di 97.9 0.00022 4.8E-09 59.4 11.1 33 154-186 94-126 (220)
77 PLN02645 phosphoglycolate phos 97.8 3.5E-05 7.5E-10 66.9 6.0 59 68-182 13-71 (311)
78 PRK08942 D,D-heptose 1,7-bisph 97.8 2.2E-05 4.8E-10 62.5 4.4 27 155-181 29-55 (181)
79 PF06941 NT5C: 5' nucleotidase 97.8 3.2E-05 7E-10 62.3 4.3 92 84-183 2-101 (191)
80 smart00775 LNS2 LNS2 domain. T 97.6 8.2E-05 1.8E-09 58.7 4.5 30 156-185 28-57 (157)
81 KOG3085 Predicted hydrolase (H 97.6 0.00052 1.1E-08 57.9 9.0 104 80-183 4-141 (237)
82 PF03767 Acid_phosphat_B: HAD 97.4 0.00012 2.6E-09 61.2 3.1 37 147-183 107-143 (229)
83 PF12689 Acid_PPase: Acid Phos 97.2 6.5E-05 1.4E-09 60.3 -0.3 29 154-182 44-72 (169)
84 TIGR01675 plant-AP plant acid 97.2 0.0016 3.4E-08 54.8 8.0 74 81-184 75-149 (229)
85 TIGR01680 Veg_Stor_Prot vegeta 97.2 0.0013 2.8E-08 56.7 7.1 36 148-183 138-173 (275)
86 TIGR01686 FkbH FkbH-like domai 97.1 0.00026 5.7E-09 61.6 2.6 33 155-187 31-63 (320)
87 PLN02177 glycerol-3-phosphate 97.1 0.0026 5.7E-08 59.0 8.8 31 155-189 110-140 (497)
88 TIGR01663 PNK-3'Pase polynucle 97.1 0.00076 1.7E-08 63.0 5.2 27 156-182 198-224 (526)
89 PHA02530 pseT polynucleotide k 97.0 0.0011 2.3E-08 56.7 4.6 34 154-187 186-219 (300)
90 PRK05446 imidazole glycerol-ph 96.9 0.00081 1.8E-08 59.9 3.9 27 154-180 29-55 (354)
91 PLN02499 glycerol-3-phosphate 96.8 0.0049 1.1E-07 57.0 7.8 26 163-189 101-126 (498)
92 PLN02887 hydrolase family prot 96.8 0.0021 4.5E-08 60.7 5.4 31 68-98 290-323 (580)
93 PRK10187 trehalose-6-phosphate 96.3 0.0071 1.5E-07 51.5 5.4 15 83-97 14-28 (266)
94 TIGR00213 GmhB_yaeD D,D-heptos 96.3 0.0035 7.7E-08 49.7 3.2 28 155-182 26-53 (176)
95 smart00577 CPDc catalytic doma 96.3 0.0027 5.9E-08 49.1 2.5 34 154-188 44-77 (148)
96 PRK06769 hypothetical protein; 96.1 0.0057 1.2E-07 48.6 3.2 28 155-182 28-55 (173)
97 TIGR01656 Histidinol-ppas hist 96.0 0.0068 1.5E-07 46.7 3.1 28 155-182 27-54 (147)
98 KOG3109 Haloacid dehalogenase- 95.9 0.062 1.3E-06 45.1 8.8 101 81-188 13-131 (244)
99 TIGR01261 hisB_Nterm histidino 95.8 0.0083 1.8E-07 47.4 3.0 26 155-180 29-54 (161)
100 PRK01158 phosphoglycolate phos 95.5 0.0073 1.6E-07 49.2 1.8 18 82-99 2-19 (230)
101 PRK14502 bifunctional mannosyl 95.5 0.018 3.9E-07 55.4 4.6 19 81-99 414-432 (694)
102 PTZ00174 phosphomannomutase; P 95.5 0.008 1.7E-07 50.3 2.0 19 81-99 3-21 (247)
103 PF13344 Hydrolase_6: Haloacid 95.4 0.015 3.3E-07 42.4 3.1 29 155-183 14-42 (101)
104 PRK09484 3-deoxy-D-manno-octul 95.4 0.01 2.2E-07 47.6 2.2 23 75-97 13-35 (183)
105 PRK14501 putative bifunctional 95.3 0.042 9.1E-07 53.1 6.4 28 69-96 476-505 (726)
106 TIGR01668 YqeG_hyp_ppase HAD s 95.2 0.025 5.3E-07 44.8 3.9 32 155-186 43-75 (170)
107 TIGR02244 HAD-IG-Ncltidse HAD 95.1 0.022 4.8E-07 50.6 3.8 35 154-188 183-217 (343)
108 PRK15126 thiamin pyrimidine py 95.1 0.012 2.6E-07 49.5 2.0 17 82-98 1-17 (272)
109 PRK10530 pyridoxal phosphate ( 95.1 0.012 2.6E-07 49.0 1.9 26 156-181 138-163 (272)
110 TIGR01689 EcbF-BcbF capsule bi 95.1 0.014 2.9E-07 44.8 1.9 15 83-97 1-15 (126)
111 PRK10976 putative hydrolase; P 95.0 0.013 2.8E-07 49.0 1.9 17 83-99 2-18 (266)
112 TIGR02245 HAD_IIID1 HAD-superf 94.9 0.032 6.9E-07 45.8 3.8 33 155-188 45-77 (195)
113 TIGR02250 FCP1_euk FCP1-like p 94.9 0.02 4.3E-07 45.2 2.5 34 154-188 57-90 (156)
114 COG0561 Cof Predicted hydrolas 94.9 0.014 3.1E-07 48.7 1.8 19 81-99 1-19 (264)
115 COG4229 Predicted enolase-phos 94.8 0.17 3.7E-06 41.5 7.8 30 153-182 101-130 (229)
116 PLN02423 phosphomannomutase 94.8 0.016 3.5E-07 48.6 2.0 18 81-98 4-22 (245)
117 TIGR01487 SPP-like sucrose-pho 94.7 0.017 3.8E-07 46.8 1.9 17 83-99 1-17 (215)
118 PRK10513 sugar phosphate phosp 94.7 0.017 3.6E-07 48.4 1.8 17 82-98 2-18 (270)
119 PRK03669 mannosyl-3-phosphogly 94.4 0.024 5.2E-07 47.9 2.0 20 80-99 4-23 (271)
120 PF00702 Hydrolase: haloacid d 94.3 0.021 4.7E-07 45.3 1.5 35 154-188 126-160 (215)
121 PLN02205 alpha,alpha-trehalose 94.3 0.11 2.4E-06 51.4 6.6 28 70-97 581-610 (854)
122 PRK00192 mannosyl-3-phosphogly 94.1 0.028 6.1E-07 47.5 1.8 17 82-98 3-19 (273)
123 PF08235 LNS2: LNS2 (Lipin/Ned 94.1 0.13 2.9E-06 40.8 5.5 24 85-108 1-24 (157)
124 PLN02580 trehalose-phosphatase 94.0 0.14 3.1E-06 46.2 6.3 21 76-96 111-132 (384)
125 COG2503 Predicted secreted aci 94.0 0.14 3.1E-06 43.6 5.9 75 81-184 77-151 (274)
126 TIGR02251 HIF-SF_euk Dullard-l 94.0 0.043 9.4E-07 43.3 2.6 34 154-188 41-74 (162)
127 TIGR02726 phenyl_P_delta pheny 93.9 0.031 6.7E-07 44.7 1.6 18 80-97 4-21 (169)
128 TIGR01670 YrbI-phosphatas 3-de 93.8 0.028 6E-07 43.8 1.2 15 83-97 1-15 (154)
129 PF00702 Hydrolase: haloacid d 93.5 0.045 9.8E-07 43.4 2.0 17 83-99 1-17 (215)
130 PLN02151 trehalose-phosphatase 93.5 0.19 4E-06 45.0 6.0 22 75-96 89-111 (354)
131 COG1778 Low specificity phosph 93.2 0.041 8.9E-07 43.9 1.2 21 77-97 2-22 (170)
132 TIGR01482 SPP-subfamily Sucros 92.9 0.042 9E-07 44.5 0.9 14 86-99 1-14 (225)
133 PRK12702 mannosyl-3-phosphogly 92.8 0.063 1.4E-06 46.9 1.9 16 83-98 1-16 (302)
134 TIGR01456 CECR5 HAD-superfamil 92.7 0.069 1.5E-06 46.6 2.1 15 85-99 2-16 (321)
135 TIGR01656 Histidinol-ppas hist 92.6 0.065 1.4E-06 41.2 1.6 16 84-99 1-16 (147)
136 TIGR01525 ATPase-IB_hvy heavy 92.6 0.1 2.2E-06 48.8 3.2 35 154-188 383-418 (556)
137 PF08645 PNK3P: Polynucleotide 92.3 0.07 1.5E-06 42.1 1.4 16 84-99 1-16 (159)
138 TIGR01511 ATPase-IB1_Cu copper 92.2 0.12 2.7E-06 48.5 3.2 35 154-188 404-438 (562)
139 PF08282 Hydrolase_3: haloacid 92.0 0.087 1.9E-06 42.3 1.7 22 159-180 83-104 (254)
140 PF11019 DUF2608: Protein of u 92.0 0.97 2.1E-05 38.3 8.1 32 155-186 81-112 (252)
141 TIGR01512 ATPase-IB2_Cd heavy 91.8 0.14 3E-06 47.8 3.0 35 154-188 361-396 (536)
142 TIGR01452 PGP_euk phosphoglyco 91.7 0.1 2.2E-06 44.4 1.8 27 156-183 144-170 (279)
143 PRK10444 UMP phosphatase; Prov 91.5 0.1 2.2E-06 44.0 1.7 17 83-99 1-17 (248)
144 TIGR00099 Cof-subfamily Cof su 91.5 0.095 2.1E-06 43.6 1.5 14 85-98 1-14 (256)
145 TIGR02463 MPGP_rel mannosyl-3- 91.2 0.11 2.3E-06 42.2 1.5 15 85-99 1-15 (221)
146 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.2 0.12 2.6E-06 43.4 1.7 17 83-99 1-17 (249)
147 TIGR02461 osmo_MPG_phos mannos 91.0 0.12 2.5E-06 42.9 1.5 13 85-97 1-13 (225)
148 PLN03064 alpha,alpha-trehalose 90.8 0.51 1.1E-05 47.2 6.0 80 68-188 574-656 (934)
149 PF03031 NIF: NLI interacting 90.1 0.14 3.1E-06 39.5 1.2 34 154-188 35-68 (159)
150 TIGR01670 YrbI-phosphatas 3-de 90.1 0.26 5.5E-06 38.3 2.6 26 163-188 36-61 (154)
151 COG0647 NagD Predicted sugar p 90.1 0.14 3.1E-06 44.0 1.3 22 78-99 3-24 (269)
152 PF13344 Hydrolase_6: Haloacid 89.9 0.17 3.7E-06 36.8 1.4 14 86-99 1-14 (101)
153 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.7 0.17 3.8E-06 42.6 1.5 30 156-185 121-150 (257)
154 TIGR01484 HAD-SF-IIB HAD-super 89.7 0.17 3.8E-06 40.4 1.4 14 85-98 1-14 (204)
155 TIGR01486 HAD-SF-IIB-MPGP mann 89.6 0.16 3.5E-06 42.3 1.2 15 85-99 1-15 (256)
156 COG5083 SMP2 Uncharacterized p 88.5 0.39 8.5E-06 44.2 2.9 26 80-105 371-397 (580)
157 TIGR02471 sucr_syn_bact_C sucr 88.0 0.24 5.2E-06 40.7 1.2 15 85-99 1-15 (236)
158 TIGR01460 HAD-SF-IIA Haloacid 87.9 0.22 4.7E-06 41.4 0.9 14 86-99 1-14 (236)
159 TIGR00685 T6PP trehalose-phosp 87.8 0.29 6.3E-06 40.7 1.6 15 83-97 3-17 (244)
160 PLN03063 alpha,alpha-trehalose 87.0 1.4 3.1E-05 43.3 6.1 28 69-96 491-520 (797)
161 TIGR01459 HAD-SF-IIA-hyp4 HAD- 86.7 0.38 8.2E-06 39.9 1.7 29 157-186 140-168 (242)
162 PF08645 PNK3P: Polynucleotide 86.4 0.62 1.3E-05 36.7 2.6 25 156-180 30-54 (159)
163 PF05822 UMPH-1: Pyrimidine 5' 86.4 0.94 2E-05 38.6 3.9 48 141-188 76-123 (246)
164 PF03031 NIF: NLI interacting 85.5 0.46 1E-05 36.6 1.5 16 84-99 1-16 (159)
165 TIGR00213 GmhB_yaeD D,D-heptos 85.2 0.47 1E-05 37.4 1.5 13 84-96 2-14 (176)
166 PF05152 DUF705: Protein of un 84.6 0.65 1.4E-05 40.4 2.1 20 80-99 119-138 (297)
167 PRK06769 hypothetical protein; 83.6 0.71 1.5E-05 36.5 1.8 16 81-96 2-17 (173)
168 COG4030 Uncharacterized protei 83.6 4.1 8.9E-05 34.8 6.4 47 141-189 70-116 (315)
169 PLN03017 trehalose-phosphatase 83.2 0.96 2.1E-05 40.6 2.7 21 75-95 102-123 (366)
170 PRK11033 zntA zinc/cadmium/mer 82.8 1.2 2.7E-05 43.3 3.4 35 154-188 567-601 (741)
171 PF09419 PGP_phosphatase: Mito 81.5 0.88 1.9E-05 36.5 1.6 17 80-96 38-54 (168)
172 TIGR01522 ATPase-IIA2_Ca golgi 81.3 1.4 3E-05 43.8 3.2 34 155-188 528-561 (884)
173 PRK10671 copA copper exporting 81.2 1.5 3.2E-05 43.2 3.3 35 154-188 649-683 (834)
174 KOG2134 Polynucleotide kinase 81.2 0.57 1.2E-05 42.4 0.5 29 71-99 63-91 (422)
175 TIGR01261 hisB_Nterm histidino 80.9 1 2.2E-05 35.5 1.8 14 84-97 2-15 (161)
176 TIGR01485 SPP_plant-cyano sucr 80.6 0.9 2E-05 37.7 1.5 12 85-96 3-14 (249)
177 COG5663 Uncharacterized conser 80.4 3.9 8.5E-05 33.2 4.9 28 154-182 71-98 (194)
178 TIGR01497 kdpB K+-transporting 80.0 1.6 3.4E-05 42.3 3.1 35 154-188 445-479 (675)
179 COG0731 Fe-S oxidoreductases [ 79.8 2.6 5.7E-05 36.8 4.1 33 153-185 90-123 (296)
180 KOG2470 Similar to IMP-GMP spe 79.8 7 0.00015 35.4 6.7 33 154-186 239-271 (510)
181 TIGR02726 phenyl_P_delta pheny 78.9 1.7 3.7E-05 34.7 2.5 26 163-188 42-67 (169)
182 COG1877 OtsB Trehalose-6-phosp 77.8 1.3 2.9E-05 38.0 1.7 17 81-97 16-32 (266)
183 COG2179 Predicted hydrolase of 77.8 1.8 4E-05 34.9 2.4 17 81-97 26-42 (175)
184 KOG4549 Magnesium-dependent ph 77.8 2.8 6.1E-05 32.5 3.2 32 154-185 43-74 (144)
185 smart00577 CPDc catalytic doma 77.6 1.6 3.4E-05 33.5 1.9 16 83-98 2-17 (148)
186 COG2179 Predicted hydrolase of 77.5 3.4 7.4E-05 33.4 3.8 35 154-188 45-79 (175)
187 COG4996 Predicted phosphatase 77.5 1.3 2.8E-05 34.6 1.4 15 84-98 1-15 (164)
188 TIGR01668 YqeG_hyp_ppase HAD s 76.6 2.4 5.3E-05 33.3 2.8 24 75-99 18-41 (170)
189 PRK01122 potassium-transportin 76.3 2.8 6E-05 40.7 3.6 35 154-188 444-478 (679)
190 COG0241 HisB Histidinol phosph 76.2 3.2 6.9E-05 33.8 3.3 26 155-180 31-56 (181)
191 TIGR01689 EcbF-BcbF capsule bi 75.3 3.7 7.9E-05 31.3 3.3 30 155-184 24-53 (126)
192 PRK13762 tRNA-modifying enzyme 74.8 3.3 7.2E-05 36.3 3.4 29 154-182 141-169 (322)
193 TIGR02250 FCP1_euk FCP1-like p 73.6 2.2 4.9E-05 33.4 1.8 19 81-99 4-22 (156)
194 COG4502 5'(3')-deoxyribonucleo 73.5 1.8 3.9E-05 34.3 1.2 30 148-180 63-92 (180)
195 KOG2882 p-Nitrophenyl phosphat 73.4 2.2 4.8E-05 37.4 1.9 26 74-99 13-38 (306)
196 PRK14010 potassium-transportin 73.4 3.5 7.7E-05 39.9 3.4 35 154-188 440-474 (673)
197 TIGR01647 ATPase-IIIA_H plasma 72.6 3.6 7.8E-05 40.2 3.4 35 154-188 441-475 (755)
198 KOG3128 Uncharacterized conser 72.3 3.7 8.1E-05 35.4 2.9 48 141-188 124-171 (298)
199 TIGR01116 ATPase-IIA1_Ca sarco 71.0 4.3 9.2E-05 40.6 3.5 35 154-188 536-570 (917)
200 PRK09484 3-deoxy-D-manno-octul 70.9 4.1 8.9E-05 32.4 2.8 27 162-188 55-81 (183)
201 COG3700 AphA Acid phosphatase 69.7 4.8 0.0001 33.1 2.9 30 156-185 115-144 (237)
202 PF05116 S6PP: Sucrose-6F-phos 69.5 3.5 7.6E-05 34.5 2.2 14 83-96 2-15 (247)
203 TIGR02251 HIF-SF_euk Dullard-l 69.4 3 6.5E-05 32.7 1.7 15 84-98 2-16 (162)
204 PF05761 5_nucleotid: 5' nucle 69.0 4.8 0.0001 37.1 3.2 34 155-188 183-216 (448)
205 COG2217 ZntA Cation transport 67.8 5.9 0.00013 38.7 3.6 35 154-188 536-570 (713)
206 TIGR01524 ATPase-IIIB_Mg magne 67.6 5.4 0.00012 39.6 3.4 35 154-188 514-548 (867)
207 PTZ00445 p36-lilke protein; Pr 66.3 2.6 5.7E-05 35.2 0.8 29 154-182 181-209 (219)
208 KOG2882 p-Nitrophenyl phosphat 66.1 7.2 0.00016 34.2 3.5 30 154-183 37-66 (306)
209 PF02358 Trehalose_PPase: Treh 65.9 3.1 6.7E-05 34.3 1.2 12 87-98 1-12 (235)
210 TIGR03365 Bsubt_queE 7-cyano-7 65.8 5.7 0.00012 33.2 2.8 29 154-182 83-111 (238)
211 PRK15122 magnesium-transportin 65.2 5.8 0.00013 39.6 3.1 35 154-188 549-583 (903)
212 TIGR01523 ATPase-IID_K-Na pota 65.0 6.6 0.00014 40.0 3.5 35 154-188 645-679 (1053)
213 TIGR01494 ATPase_P-type ATPase 64.5 7.5 0.00016 35.8 3.5 35 154-188 346-380 (499)
214 PRK10517 magnesium-transportin 64.1 6.4 0.00014 39.3 3.2 35 154-188 549-583 (902)
215 PLN02382 probable sucrose-phos 64.0 3.9 8.4E-05 37.1 1.5 13 85-97 11-23 (413)
216 TIGR01517 ATPase-IIB_Ca plasma 63.9 7.5 0.00016 38.9 3.6 34 155-188 579-612 (941)
217 PF06901 FrpC: RTX iron-regula 63.1 5.5 0.00012 33.1 2.1 37 54-96 35-71 (271)
218 TIGR01459 HAD-SF-IIA-hyp4 HAD- 61.6 5.6 0.00012 32.9 1.9 22 78-99 3-24 (242)
219 TIGR01106 ATPase-IIC_X-K sodiu 61.3 7.8 0.00017 39.1 3.2 35 154-188 567-601 (997)
220 TIGR01657 P-ATPase-V P-type AT 59.5 10 0.00022 38.5 3.7 35 154-188 655-689 (1054)
221 cd05014 SIS_Kpsf KpsF-like pro 56.6 13 0.00029 27.0 3.1 31 155-185 58-88 (128)
222 TIGR03470 HpnH hopanoid biosyn 56.0 13 0.00029 32.3 3.4 29 153-181 82-110 (318)
223 TIGR02109 PQQ_syn_pqqE coenzym 54.5 16 0.00035 31.9 3.8 28 154-181 64-91 (358)
224 TIGR02244 HAD-IG-Ncltidse HAD 53.8 7.1 0.00015 34.8 1.4 19 80-98 9-27 (343)
225 cd05008 SIS_GlmS_GlmD_1 SIS (S 53.7 16 0.00035 26.5 3.1 30 156-185 58-87 (126)
226 TIGR01652 ATPase-Plipid phosph 51.8 12 0.00027 37.9 2.9 34 154-187 630-663 (1057)
227 TIGR02495 NrdG2 anaerobic ribo 51.3 20 0.00042 28.2 3.5 29 154-182 73-101 (191)
228 COG0241 HisB Histidinol phosph 51.1 9 0.00019 31.1 1.5 17 82-98 4-20 (181)
229 COG0474 MgtA Cation transport 49.9 18 0.00039 36.3 3.6 36 153-188 545-580 (917)
230 TIGR01452 PGP_euk phosphoglyco 49.8 11 0.00023 32.0 1.8 18 82-99 1-18 (279)
231 PRK10076 pyruvate formate lyas 48.9 19 0.00042 29.7 3.2 29 154-182 49-78 (213)
232 PTZ00445 p36-lilke protein; Pr 48.7 17 0.00038 30.4 2.8 30 155-184 75-104 (219)
233 PRK05301 pyrroloquinoline quin 48.6 22 0.00047 31.4 3.6 28 154-181 73-100 (378)
234 KOG3189 Phosphomannomutase [Li 48.5 11 0.00023 31.7 1.5 15 84-98 12-26 (252)
235 KOG0207 Cation transport ATPas 47.8 19 0.00041 36.1 3.3 35 154-188 722-756 (951)
236 COG1180 PflA Pyruvate-formate 47.8 15 0.00032 31.2 2.4 29 154-182 95-123 (260)
237 KOG2469 IMP-GMP specific 5'-nu 47.2 9.6 0.00021 34.8 1.1 29 158-186 201-229 (424)
238 COG3769 Predicted hydrolase (H 46.3 13 0.00027 31.7 1.6 16 81-96 5-20 (274)
239 TIGR01458 HAD-SF-IIA-hyp3 HAD- 45.0 15 0.00032 30.8 1.9 17 83-99 1-17 (257)
240 COG4275 Uncharacterized conser 44.8 22 0.00047 27.5 2.6 43 70-112 32-78 (143)
241 TIGR03127 RuMP_HxlB 6-phospho 44.8 24 0.00052 27.5 3.0 32 155-186 83-114 (179)
242 cd05710 SIS_1 A subgroup of th 44.7 26 0.00057 25.7 3.1 30 156-185 59-88 (120)
243 COG4996 Predicted phosphatase 44.4 21 0.00046 28.0 2.5 30 154-183 40-69 (164)
244 cd05013 SIS_RpiR RpiR-like pro 43.9 26 0.00057 25.2 2.9 29 157-185 73-101 (139)
245 PLN03190 aminophospholipid tra 43.5 24 0.00053 36.4 3.5 33 154-186 725-757 (1178)
246 PLN03017 trehalose-phosphatase 43.3 28 0.00062 31.3 3.5 34 154-188 132-165 (366)
247 KOG0204 Calcium transporting A 42.8 25 0.00054 35.3 3.3 35 154-188 646-680 (1034)
248 PF01380 SIS: SIS domain SIS d 42.7 29 0.00064 25.0 3.0 31 155-185 64-94 (131)
249 COG1334 FlaG Uncharacterized f 42.5 6.5 0.00014 29.9 -0.5 24 70-97 95-118 (120)
250 PRK11145 pflA pyruvate formate 41.1 25 0.00054 29.0 2.7 29 154-182 81-110 (246)
251 PF09828 Chrome_Resist: Chroma 40.9 32 0.0007 26.7 3.1 43 70-112 30-76 (135)
252 TIGR02826 RNR_activ_nrdG3 anae 40.6 29 0.00062 27.0 2.8 26 157-182 74-99 (147)
253 cd06539 CIDE_N_A CIDE_N domain 40.5 29 0.00063 24.4 2.5 19 83-101 40-58 (78)
254 cd05006 SIS_GmhA Phosphoheptos 40.3 32 0.0007 26.9 3.1 30 155-184 112-141 (177)
255 COG2216 KdpB High-affinity K+ 40.3 30 0.00065 33.0 3.2 32 155-186 447-478 (681)
256 TIGR02494 PFLE_PFLC glycyl-rad 40.2 26 0.00057 29.7 2.8 28 154-181 136-164 (295)
257 KOG0202 Ca2+ transporting ATPa 39.2 33 0.00071 34.4 3.4 35 154-188 583-617 (972)
258 PF09419 PGP_phosphatase: Mito 38.0 38 0.00083 27.1 3.2 28 154-181 58-87 (168)
259 smart00266 CAD Domains present 37.4 33 0.0007 23.9 2.3 18 83-100 38-55 (74)
260 cd06537 CIDE_N_B CIDE_N domain 37.3 24 0.00053 25.0 1.7 18 84-101 40-57 (81)
261 PRK14129 heat shock protein Hs 37.1 31 0.00067 25.6 2.3 25 81-105 17-42 (105)
262 PRK13937 phosphoheptose isomer 37.0 39 0.00085 26.9 3.2 31 155-185 117-147 (188)
263 TIGR00441 gmhA phosphoheptose 37.0 38 0.00083 26.0 3.0 30 156-185 91-120 (154)
264 PRK13717 conjugal transfer pro 36.7 18 0.0004 27.8 1.1 19 76-94 38-56 (128)
265 TIGR03278 methan_mark_10 putat 36.2 37 0.00081 30.9 3.2 28 154-181 85-113 (404)
266 KOG2116 Protein involved in pl 36.1 27 0.00059 33.9 2.3 23 83-105 530-552 (738)
267 smart00497 IENR1 Intron encode 35.9 48 0.001 20.3 2.9 27 84-110 3-30 (53)
268 COG4087 Soluble P-type ATPase 35.0 28 0.00061 27.3 1.9 33 153-186 28-60 (152)
269 COG0602 NrdG Organic radical a 34.8 49 0.0011 27.2 3.5 28 155-182 83-110 (212)
270 TIGR02668 moaA_archaeal probab 34.7 49 0.0011 28.1 3.6 28 154-181 67-95 (302)
271 cd06589 GH31 The enzymes of gl 34.6 46 0.001 28.0 3.4 26 155-180 63-88 (265)
272 cd05005 SIS_PHI Hexulose-6-pho 33.8 46 0.00099 26.0 3.0 30 155-184 86-115 (179)
273 PF05761 5_nucleotid: 5' nucle 33.5 25 0.00054 32.5 1.6 18 80-97 9-26 (448)
274 TIGR02493 PFLA pyruvate format 33.4 46 0.001 27.0 3.1 28 154-181 76-104 (235)
275 cd01615 CIDE_N CIDE_N domain, 33.3 30 0.00065 24.3 1.7 17 84-100 41-57 (78)
276 PF08620 RPAP1_C: RPAP1-like, 32.8 16 0.00035 25.4 0.2 9 87-95 4-12 (73)
277 cd06536 CIDE_N_ICAD CIDE_N dom 32.5 31 0.00068 24.4 1.7 17 84-100 43-59 (80)
278 PRK10671 copA copper exporting 31.1 37 0.00079 33.6 2.5 24 75-98 509-532 (834)
279 cd06595 GH31_xylosidase_XylS-l 30.6 58 0.0013 27.9 3.4 25 155-179 71-95 (292)
280 KOG0323 TFIIF-interacting CTD 30.6 38 0.00083 32.8 2.4 35 154-189 200-234 (635)
281 COG0263 ProB Glutamate 5-kinas 30.4 54 0.0012 29.6 3.1 23 159-181 32-54 (369)
282 PRK00414 gmhA phosphoheptose i 29.6 61 0.0013 26.0 3.2 30 156-185 123-152 (192)
283 KOG1605 TFIIF-interacting CTD 29.2 36 0.00077 29.3 1.8 19 80-98 86-104 (262)
284 KOG1154 Gamma-glutamyl kinase 29.2 60 0.0013 27.9 3.1 25 159-183 36-60 (285)
285 PF06189 5-nucleotidase: 5'-nu 27.9 27 0.00059 30.1 0.9 15 85-99 123-137 (264)
286 cd04795 SIS SIS domain. SIS (S 27.5 72 0.0016 21.1 2.8 24 155-178 58-81 (87)
287 PRK11337 DNA-binding transcrip 27.1 69 0.0015 27.0 3.2 31 156-186 199-229 (292)
288 PRK11557 putative DNA-binding 26.8 64 0.0014 27.0 2.9 31 155-185 186-216 (278)
289 cd05017 SIS_PGI_PMI_1 The memb 26.7 78 0.0017 23.0 3.1 26 156-181 55-80 (119)
290 PF01976 DUF116: Protein of un 26.1 71 0.0015 25.2 2.9 24 159-182 74-97 (158)
291 PF02017 CIDE-N: CIDE-N domain 26.0 42 0.00092 23.5 1.4 17 84-100 41-57 (78)
292 cd06594 GH31_glucosidase_YihQ 25.9 75 0.0016 27.7 3.3 26 154-179 67-92 (317)
293 COG2044 Predicted peroxiredoxi 25.8 97 0.0021 23.6 3.4 29 154-182 58-86 (120)
294 cd06591 GH31_xylosidase_XylS X 25.7 79 0.0017 27.4 3.4 25 154-178 62-86 (319)
295 cd06538 CIDE_N_FSP27 CIDE_N do 25.6 49 0.0011 23.3 1.6 18 84-101 40-57 (79)
296 cd06599 GH31_glycosidase_Aec37 25.6 79 0.0017 27.4 3.3 25 154-178 69-93 (317)
297 PRK15482 transcriptional regul 25.2 76 0.0016 26.8 3.1 32 154-185 192-223 (285)
298 cd04906 ACT_ThrD-I_1 First of 25.2 89 0.0019 21.5 3.0 26 158-183 53-78 (85)
299 PRK13938 phosphoheptose isomer 24.7 83 0.0018 25.6 3.1 30 156-185 125-154 (196)
300 PF13588 HSDR_N_2: Type I rest 24.6 66 0.0014 23.0 2.3 26 158-183 68-93 (112)
301 PRK11543 gutQ D-arabinose 5-ph 24.6 79 0.0017 27.0 3.1 32 155-186 100-131 (321)
302 COG2810 Predicted type IV rest 24.3 78 0.0017 27.2 2.9 26 156-181 82-107 (284)
303 cd06598 GH31_transferase_CtsZ 24.2 90 0.0019 27.1 3.4 26 154-179 66-91 (317)
304 smart00851 MGS MGS-like domain 23.7 1E+02 0.0022 21.2 3.1 13 162-174 4-16 (90)
305 cd06592 GH31_glucosidase_KIAA1 22.9 95 0.0021 26.7 3.3 25 155-179 67-91 (303)
306 cd06593 GH31_xylosidase_YicI Y 22.9 96 0.0021 26.5 3.3 26 154-179 62-87 (308)
307 PRK13936 phosphoheptose isomer 22.8 89 0.0019 25.1 2.9 28 156-183 123-150 (197)
308 cd06597 GH31_transferase_CtsY 22.6 97 0.0021 27.3 3.4 22 156-177 83-104 (340)
309 PRK13361 molybdenum cofactor b 22.5 1.1E+02 0.0023 26.7 3.6 28 154-181 72-101 (329)
310 cd04256 AAK_P5CS_ProBA AAK_P5C 22.1 88 0.0019 26.9 2.9 24 159-182 35-58 (284)
311 COG1778 Low specificity phosph 22.1 95 0.0021 25.0 2.8 23 164-186 44-66 (170)
312 PRK11382 frlB fructoselysine-6 21.9 94 0.002 27.2 3.1 31 156-186 104-134 (340)
313 COG3882 FkbH Predicted enzyme 21.7 55 0.0012 30.9 1.6 15 81-95 220-234 (574)
314 PF13580 SIS_2: SIS domain; PD 21.6 76 0.0016 23.9 2.2 24 156-179 115-138 (138)
315 TIGR02666 moaA molybdenum cofa 21.5 1.2E+02 0.0026 26.2 3.7 28 154-181 70-99 (334)
316 PRK10892 D-arabinose 5-phospha 21.4 89 0.0019 26.8 2.8 31 155-185 105-135 (326)
317 KOG0206 P-type ATPase [General 21.2 1.9E+02 0.004 30.2 5.3 33 153-185 649-681 (1151)
318 PF13394 Fer4_14: 4Fe-4S singl 21.1 32 0.0007 24.7 0.0 26 158-183 65-92 (119)
319 cd06603 GH31_GANC_GANAB_alpha 21.1 1.1E+02 0.0023 26.8 3.3 26 154-179 60-85 (339)
320 TIGR00393 kpsF KpsF/GutQ famil 21.0 96 0.0021 25.6 2.9 31 155-185 58-88 (268)
321 PRK10886 DnaA initiator-associ 20.5 1.1E+02 0.0024 24.9 3.0 30 156-185 121-150 (196)
322 cd06600 GH31_MGAM-like This fa 20.1 1.1E+02 0.0025 26.4 3.3 25 154-178 60-84 (317)
323 PF13353 Fer4_12: 4Fe-4S singl 20.1 1.1E+02 0.0024 22.3 2.8 27 157-183 69-96 (139)
324 PRK13402 gamma-glutamyl kinase 20.0 1.1E+02 0.0024 27.4 3.2 23 159-181 31-53 (368)
No 1
>PLN02954 phosphoserine phosphatase
Probab=99.86 E-value=3.9e-21 Score=157.39 Aligned_cols=117 Identities=85% Similarity=1.368 Sum_probs=103.7
Q ss_pred ChHHHHhhhcCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHh
Q 029711 72 PSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEK 151 (189)
Q Consensus 72 ~~~~~~~~~~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~ 151 (189)
|||+++++|+++|+++|||||||+|++++..+++.+|......+++.++++|.+++.+.+..++..+....+.+.++++.
T Consensus 1 ~~~~~~~~~~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PLN02954 1 PSKDVLELWRSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPSLSQVEEFLEK 80 (224)
T ss_pred ChHHHHHHHccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 79999999999999999999999999999999999998766678888899999999998888877765566677777776
Q ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 152 ~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
....++||+.++|++|+++|++++|+||+.+..++++
T Consensus 81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~ 117 (224)
T PLN02954 81 RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPV 117 (224)
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHH
Confidence 5567999999999999999999999999999988765
No 2
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.3e-20 Score=149.67 Aligned_cols=116 Identities=60% Similarity=0.983 Sum_probs=109.9
Q ss_pred HHHHhhhcCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCC
Q 029711 74 KEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRP 153 (189)
Q Consensus 74 ~~~~~~~~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~ 153 (189)
+|+.++|+..++||||||.|++..|.++++|+++|....+.++++++|+|.++|+++++.|+..+++..+++++++...+
T Consensus 7 ~e~~~~~~~~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v~~~k 86 (227)
T KOG1615|consen 7 SELAKLWRSADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFVIKQK 86 (227)
T ss_pred HHHHHHHHhcCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHHhcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999888888888887777
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
+.+.||++|++..|+++|.+++++|+|++.++++++
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va 122 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA 122 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH
Confidence 899999999999999999999999999999999874
No 3
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.70 E-value=1.9e-16 Score=129.20 Aligned_cols=111 Identities=37% Similarity=0.555 Sum_probs=90.7
Q ss_pred HHhhhcCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCC
Q 029711 76 VLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPP 154 (189)
Q Consensus 76 ~~~~~~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~eel~~~~~~~~~ 154 (189)
+-++..++++++|||||||+|++.+..+++.+|.+....++..+++.|..++.+.+..++..+.+ +.+.+..+.+. .
T Consensus 7 ~~~~~~~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 84 (219)
T TIGR00338 7 LSPLLRSKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPVELLKEVREN--L 84 (219)
T ss_pred chhhhccCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCHHHHHHHHhc--C
Confidence 44567888999999999999999999999888886555566677788888998888877766544 45555656554 4
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+++||+.++|+.|+++|++++|+||+....++++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~ 118 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHV 118 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHH
Confidence 7999999999999999999999999998887654
No 4
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.67 E-value=4.1e-16 Score=128.93 Aligned_cols=108 Identities=40% Similarity=0.590 Sum_probs=98.7
Q ss_pred cCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHhCCCCCCcc
Q 029711 81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEKRPPRLSPG 159 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~eel~~~~~~~~~~l~pG 159 (189)
++.++++|||||||++.++++.++...|.......+..+.+.|.+++.+.++.++..+++ +.+.++++.++. .+++||
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~-~~l~~g 81 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF-LRLTPG 81 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc-CcCCcc
Confidence 567899999999999988999999999998888899999999999999999999998888 678888888874 589999
Q ss_pred HHHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 160 IDELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 160 ~~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
+.+++++|+++|++++|+|+|+..++++++
T Consensus 82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia 111 (212)
T COG0560 82 AEELVAALKAAGAKVVIISGGFTFLVEPIA 111 (212)
T ss_pred HHHHHHHHHHCCCEEEEEcCChHHHHHHHH
Confidence 999999999999999999999999998874
No 5
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.64 E-value=2.2e-15 Score=123.87 Aligned_cols=104 Identities=18% Similarity=0.335 Sum_probs=86.7
Q ss_pred CceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHHHHHHHhCCCCCCccHH
Q 029711 83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGID 161 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~eel~~~~~~~~~~l~pG~~ 161 (189)
.++++|||||||++++....+++.++. ...+++..+++.|++++.+.+..++..+... .+++.+++... ..++||+.
T Consensus 3 ~~~vifDfDgTi~~~d~~~~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~pG~~ 80 (219)
T PRK09552 3 SIQIFCDFDGTITNNDNIIAIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSNLKEEIIQFLLET-AEIREGFH 80 (219)
T ss_pred CcEEEEcCCCCCCcchhhHHHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCCchHHHHHHHHhC-CCcCcCHH
Confidence 458999999999999987776777764 3345677788889999999999999887653 46666766553 68999999
Q ss_pred HHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 162 ELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 162 elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
++|++|+++|++++|+||+.+.+++++
T Consensus 81 e~l~~l~~~g~~~~IvS~~~~~~i~~i 107 (219)
T PRK09552 81 EFVQFVKENNIPFYVVSGGMDFFVYPL 107 (219)
T ss_pred HHHHHHHHcCCeEEEECCCcHHHHHHH
Confidence 999999999999999999999998875
No 6
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.63 E-value=2.9e-15 Score=130.97 Aligned_cols=107 Identities=39% Similarity=0.522 Sum_probs=91.5
Q ss_pred hcCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH-HHHHHHHHhCCCCCCc
Q 029711 80 WRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL-SQVQDFLEKRPPRLSP 158 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~-eel~~~~~~~~~~l~p 158 (189)
++++++++|||||||+..++++++++.+|.+.....++.+++.|.+++.+.+..++..+.+.. +.++.+.+. .+++|
T Consensus 107 ~~~~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~il~~v~~~--l~l~p 184 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANILQQVREN--LPLMP 184 (322)
T ss_pred ccCCCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHHHHHHHHh--CCCCh
Confidence 467899999999999999999999999999888788888899999999999998888776643 334444443 58999
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 159 GIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
|+.++|++|+++|++++|+||+++.+++++
T Consensus 185 Ga~elL~~Lk~~G~~~aIvSgg~~~~~~~l 214 (322)
T PRK11133 185 GLTELVLKLQALGWKVAIASGGFTYFADYL 214 (322)
T ss_pred hHHHHHHHHHHcCCEEEEEECCcchhHHHH
Confidence 999999999999999999999998777653
No 7
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.59 E-value=1.8e-14 Score=115.26 Aligned_cols=105 Identities=20% Similarity=0.241 Sum_probs=77.4
Q ss_pred CCceEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-----CHHHHHHHHHhCCCC
Q 029711 82 TADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-----SLSQVQDFLEKRPPR 155 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-----~~eel~~~~~~~~~~ 155 (189)
++|+++|||||||+|++. +..+...+|...........+..|.+++.+.+......+.. ..+++.+++++ ..
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 80 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKE--IS 80 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHh--CC
Confidence 688999999999999765 55565667765333333345666888888776544333211 34556666655 47
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
++||+.++|+.|+++|++++|+||+...+++++
T Consensus 81 ~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~ 113 (201)
T TIGR01491 81 LRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKV 113 (201)
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHH
Confidence 999999999999999999999999999888765
No 8
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.56 E-value=3.7e-14 Score=111.45 Aligned_cols=103 Identities=35% Similarity=0.565 Sum_probs=83.4
Q ss_pred eEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHHHH-HHHhCCCCCCccHH
Q 029711 85 AVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQD-FLEKRPPRLSPGID 161 (189)
Q Consensus 85 avIFDmDGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~eel~~-~~~~~~~~l~pG~~ 161 (189)
+++|||||||++.++ +..+....|......++...++.|.+++.+.+..++..+.+. .+++.+ ++.+. .+++||+.
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 79 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQ-VALRPGAR 79 (177)
T ss_pred CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhc-CCcCcCHH
Confidence 479999999999998 455555666544556788888989999999998888777663 355554 66554 57899999
Q ss_pred HHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 162 ELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 162 elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
++|+.|+++|++++|+|++.+.+++++
T Consensus 80 ~~l~~l~~~g~~~~ivS~~~~~~i~~~ 106 (177)
T TIGR01488 80 ELISWLKERGIDTVIVSGGFDFFVEPV 106 (177)
T ss_pred HHHHHHHHCCCEEEEECCCcHHHHHHH
Confidence 999999999999999999999988875
No 9
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.52 E-value=7.7e-14 Score=117.01 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=79.1
Q ss_pred CCCCChHHHHhhhcCCceEEEECCCcccccch-----HHHHHHHcCC----CccHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 029711 68 ENTLPSKEVLQLWRTADAVCFDVDSTVCVDEG-----IDELAEFCGA----GKAVAEWTARAMGGSVPFEEALAARLSLF 138 (189)
Q Consensus 68 ~~~~~~~~~~~~~~~~kavIFDmDGTLiDse~-----~~~la~~~G~----~~~~~~~~~~~~gG~~~~~e~l~~~~~~~ 138 (189)
+|...||+-++-..+++++||||||||+|++. +..+++++|. +..........+| .+..+.+...+...
T Consensus 7 ~~~~~~~~~~~~~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G--~~~~~~~~~~~~~~ 84 (248)
T PLN02770 7 ENSVESKSSLSGLAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAG--KHNEDIALGLFPDD 84 (248)
T ss_pred cccccccccccccCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCC--CCHHHHHHHHcCcc
Confidence 68888888888889999999999999999985 3445556653 2232223333344 35555554333211
Q ss_pred CCC----HHHHHHHHHh---CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 139 KPS----LSQVQDFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 139 ~~~----~eel~~~~~~---~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
... .+.+.+.+.. ....++||+.++|++|+++|++++|+||+.+..++.
T Consensus 85 ~~~~~~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~ 140 (248)
T PLN02770 85 LERGLKFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAEL 140 (248)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHH
Confidence 001 1112222321 247899999999999999999999999999887764
No 10
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.51 E-value=1.3e-13 Score=113.10 Aligned_cols=101 Identities=16% Similarity=0.322 Sum_probs=83.8
Q ss_pred EEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHHHHHHHHhCCCCCCccHHHHH
Q 029711 86 VCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQVQDFLEKRPPRLSPGIDELV 164 (189)
Q Consensus 86 vIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~eel~~~~~~~~~~l~pG~~elL 164 (189)
++|||||||++.+++..+++.++. +...++..+++.|.+++.+.+..++..+..+ .+++.+++.+ ..+++||+.++|
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~l~pg~~e~l 79 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAP-PEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLE-TAEIREGFREFV 79 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCc-HHHHHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHh-cCcccccHHHHH
Confidence 799999999999998887776654 2345667778888899999998888877554 4577776655 368999999999
Q ss_pred HHHHHCCCeEEEEcCCchhhhhhc
Q 029711 165 KKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 165 ~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
++|+++|++++|+|++.+.+++++
T Consensus 80 ~~l~~~g~~~~IvS~~~~~~i~~i 103 (214)
T TIGR03333 80 AFINEHGIPFYVISGGMDFFVYPL 103 (214)
T ss_pred HHHHHCCCeEEEECCCcHHHHHHH
Confidence 999999999999999999988875
No 11
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.45 E-value=1.2e-12 Score=106.74 Aligned_cols=104 Identities=23% Similarity=0.279 Sum_probs=69.0
Q ss_pred CceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH---HH----HHHHHH
Q 029711 83 ADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL---SQ----VQDFLE 150 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~---ee----l~~~~~ 150 (189)
++++||||||||+|+.. +..+++++|......+....+.+ .+..+.+...+.....+. ++ +.+.+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMG--QSKIEAIRALLALDGADEAEAQAAFADFEERLA 78 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcC--CCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 47899999999999875 34455667876554343333454 455666655443211121 11 122221
Q ss_pred ----hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 151 ----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 151 ----~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.....++||+.++|++|+++|++++|+||+....++.+
T Consensus 79 ~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~ 120 (220)
T TIGR03351 79 EAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERL 120 (220)
T ss_pred HHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHH
Confidence 22368999999999999999999999999998876643
No 12
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.45 E-value=8.7e-13 Score=109.28 Aligned_cols=105 Identities=22% Similarity=0.215 Sum_probs=67.0
Q ss_pred CCceEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCC-CHHHHHHHHHhccC-CCHHHHHHH----H-
Q 029711 82 TADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSV-PFEEALAARLSLFK-PSLSQVQDF----L- 149 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~-~~~e~l~~~~~~~~-~~~eel~~~----~- 149 (189)
+++++||||||||+||+.+ ..+++.+|.....+..... .++.. .....+........ ......... .
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIREL-HGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEA 79 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHH-HCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHH
Confidence 4789999999999999874 4556678987654344433 44322 22222222222111 111111111 1
Q ss_pred H-hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 150 E-KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 150 ~-~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
. ....++.||+.++|+.|+++|++++++||+.+..++.
T Consensus 80 ~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~ 118 (221)
T COG0637 80 LELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAER 118 (221)
T ss_pred hhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHH
Confidence 1 1247899999999999999999999999998776654
No 13
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.44 E-value=9.1e-13 Score=111.88 Aligned_cols=105 Identities=23% Similarity=0.237 Sum_probs=71.4
Q ss_pred hcCCceEEEECCCcccccc-h-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCH---HHH----H
Q 029711 80 WRTADAVCFDVDSTVCVDE-G-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSL---SQV----Q 146 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse-~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~---eel----~ 146 (189)
-..+++|||||||||+||+ . |..+++.+|......+.....+| .+..+.+...+.. ..+. +++ .
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G--~~~~~~~~~l~~~-~~~~~~~~~l~~~~~ 97 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEG--MKNEQAISEVLCW-SRDFLQMKRLAIRKE 97 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhcc-CCCHHHHHHHHHHHH
Confidence 4568999999999999995 3 33455678887555555556666 5556665544331 1111 111 1
Q ss_pred HHH---HhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 147 DFL---EKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 147 ~~~---~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.++ ......++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 98 ~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~ 141 (260)
T PLN03243 98 DLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLER 141 (260)
T ss_pred HHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHH
Confidence 222 12236789999999999999999999999999876654
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.42 E-value=1.5e-12 Score=106.67 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=64.1
Q ss_pred CCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC--HHHHHHH--HH--
Q 029711 82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS--LSQVQDF--LE-- 150 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~--~eel~~~--~~-- 150 (189)
++++|||||||||+|++. +..+++++|.+. .+.....+| .+..+.++......... .+.+..+ +.
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~--~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP--DEVLNFIHG--KQAITSLRHFMAGASEAEIQAEFTRLEQIEAT 77 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH--HHHHHHHcC--CCHHHHHHHHhccCCcHHHHHHHHHHHHHHHh
Confidence 578999999999999975 344556788753 333333333 44444444332211111 1112211 11
Q ss_pred -hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 151 -KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 151 -~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.....++||+.++|+.|+++|++++|+||+....+
T Consensus 78 ~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~ 113 (218)
T PRK11587 78 DTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVA 113 (218)
T ss_pred hhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHH
Confidence 12468999999999999999999999999987654
No 15
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.42 E-value=8.7e-13 Score=107.45 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=65.4
Q ss_pred CCceEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH----HHHHHHh-
Q 029711 82 TADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ----VQDFLEK- 151 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~ee----l~~~~~~- 151 (189)
++++|+|||||||+|++.. ..+++++|......+.+...+| .+..+.+... . ....++ +..++..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 76 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIG--PSLHDTFSKI-D--ESKVEEMITTYREFNHEH 76 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhC--cCHHHHHHhc-C--HHHHHHHHHHHHHHHHHh
Confidence 5789999999999998753 3445566654222333445554 4555544421 1 111112 2222221
Q ss_pred --CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 152 --RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 152 --~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
....++||+.++|++|+++|++++|+||+.+..++.
T Consensus 77 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~ 114 (214)
T PRK13288 77 HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEM 114 (214)
T ss_pred hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHH
Confidence 136799999999999999999999999999877654
No 16
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.40 E-value=1.7e-12 Score=107.43 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=67.6
Q ss_pred hcCCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHH----HHHHH
Q 029711 80 WRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQ----VQDFL 149 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~ee----l~~~~ 149 (189)
-.+++++||||||||+|+.. +..+...+|.+....+.....++ .+....+......... ..++ +.+.+
T Consensus 9 ~~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (229)
T PRK13226 9 VRFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVS--KGARAMLAVAFPELDAAARDALIPEFLQRY 86 (229)
T ss_pred cccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhh--hHHHHHHHHHhccCChHHHHHHHHHHHHHH
Confidence 36679999999999999975 33455577875322344454554 3444444333222211 1111 22222
Q ss_pred Hh---CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 150 EK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 150 ~~---~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
.. ....++||+.++|++|+++|++++|+||+....+.
T Consensus 87 ~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~ 126 (229)
T PRK13226 87 EALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLAR 126 (229)
T ss_pred HHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 21 13689999999999999999999999999877654
No 17
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.39 E-value=3.2e-12 Score=100.97 Aligned_cols=101 Identities=18% Similarity=0.277 Sum_probs=73.2
Q ss_pred eEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCC--CCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCccHHH
Q 029711 85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGG--SVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE 162 (189)
Q Consensus 85 avIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG--~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG~~e 162 (189)
+++|||||||+|.+....+++.++.+ ...+.......+ ..++.+.+...+.....+.+++.+.+.+ .+++||+.+
T Consensus 3 ~iiFD~dgTL~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~~ 79 (188)
T TIGR01489 3 VVVSDFDGTITLNDSDDWITDKFGPP-EANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKS--APIDPGFKE 79 (188)
T ss_pred EEEEeCCCcccCCCchHHHHHhcCcc-hhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHh--CCCCccHHH
Confidence 68999999999999888888887743 333444444432 3445555554443332255667777765 489999999
Q ss_pred HHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 163 LVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 163 lL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+|+.|+++|++++|+||+....++.+
T Consensus 80 ll~~l~~~g~~~~i~S~~~~~~~~~~ 105 (188)
T TIGR01489 80 FIAFIKEHGIDFIVISDGNDFFIDPV 105 (188)
T ss_pred HHHHHHHcCCcEEEEeCCcHHHHHHH
Confidence 99999999999999999998877653
No 18
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.38 E-value=2.4e-12 Score=105.70 Aligned_cols=97 Identities=16% Similarity=0.258 Sum_probs=78.9
Q ss_pred ceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--C-CHHHHHHHHHhCCCCCCccH
Q 029711 84 DAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPGI 160 (189)
Q Consensus 84 kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~-~~eel~~~~~~~~~~l~pG~ 160 (189)
.+++|||||||++. .|.+++...|.... .. ..++...+.++++.++..+. + +.++++++++. ++++||+
T Consensus 2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~--~~---~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~--i~l~pga 73 (203)
T TIGR02137 2 EIACLDLEGVLVPE-IWIAFAEKTGIDAL--KA---TTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIAT--LKPLEGA 73 (203)
T ss_pred eEEEEeCCcccHHH-HHHHHHHHcCCcHH--HH---HhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHh--CCCCccH
Confidence 56999999999975 68899998886432 22 34566789999988887763 5 77888888876 4799999
Q ss_pred HHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 161 DELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 161 ~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
.++|++|++++ +++|+||+++.++++++
T Consensus 74 ~ell~~lk~~~-~~~IVS~~~~~~~~~il 101 (203)
T TIGR02137 74 VEFVDWLRERF-QVVILSDTFYEFSQPLM 101 (203)
T ss_pred HHHHHHHHhCC-eEEEEeCChHHHHHHHH
Confidence 99999999975 99999999999998763
No 19
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.38 E-value=2.4e-12 Score=106.18 Aligned_cols=106 Identities=17% Similarity=0.240 Sum_probs=71.3
Q ss_pred cCCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-----HHHH----H
Q 029711 81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-----LSQV----Q 146 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-----~eel----~ 146 (189)
+++++++||+||||+|+.. +...++.+|.+....+.+...++ ....+.+.......... .+.+ .
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIG--LGLDELIERLLGEADEEAAAELVERLREEFL 79 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhc--CCHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 5689999999999999875 33455677887433455666665 45455554433321111 1111 1
Q ss_pred HHHHhC-CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 147 DFLEKR-PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 147 ~~~~~~-~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.+.+. ...++||+.++|++|+++|++++|+||+++..++.+
T Consensus 80 ~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~ 122 (220)
T COG0546 80 TAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDIL 122 (220)
T ss_pred HHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHH
Confidence 222222 147999999999999999999999999999888764
No 20
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.37 E-value=2.6e-12 Score=109.86 Aligned_cols=104 Identities=20% Similarity=0.167 Sum_probs=68.0
Q ss_pred CCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHH----HHHHHHHh-
Q 029711 82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLS----QVQDFLEK- 151 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~e----el~~~~~~- 151 (189)
++++++|||||||+||+. +..+++.+|.+....+...+.++ .+..+.++. +.......+ ++.+.+..
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g--~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~ 137 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQ--WSSRTIVRR-AGLSPWQQARLLQRVQRQLGDC 137 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhC--ccHHHHHHH-cCCCHHHHHHHHHHHHHHHHhh
Confidence 478999999999999974 34455677876433444555555 344444432 221000111 12222222
Q ss_pred -CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 152 -RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 152 -~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
....++||+.++|+.|+++|++++|+||+.+..++.+
T Consensus 138 ~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~ 175 (273)
T PRK13225 138 LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAF 175 (273)
T ss_pred cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 1357899999999999999999999999998877643
No 21
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.37 E-value=5.7e-12 Score=112.43 Aligned_cols=105 Identities=20% Similarity=0.178 Sum_probs=72.2
Q ss_pred cCCceEEEECCCcccccch-H-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHHH----HHHH
Q 029711 81 RTADAVCFDVDSTVCVDEG-I-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLSQ----VQDF 148 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~-~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~ee----l~~~ 148 (189)
.+.++|||||||||+|++. + ..+++.+|......+.....+| .+..+.+...+..... ..++ +.++
T Consensus 129 ~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G--~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~ 206 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEG--MKNEQAISEVLCWSRDPAELRRMATRKEEI 206 (381)
T ss_pred CCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHhhccCCHHHHHHHHHHHHHH
Confidence 4578999999999999874 2 3355677887655555566665 6666666654432111 1111 2223
Q ss_pred HHh---CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 149 LEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 149 ~~~---~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
+.+ ....++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 207 y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~ 248 (381)
T PLN02575 207 YQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLEN 248 (381)
T ss_pred HHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHH
Confidence 321 235789999999999999999999999999887764
No 22
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.37 E-value=4.6e-12 Score=102.12 Aligned_cols=97 Identities=19% Similarity=0.296 Sum_probs=75.4
Q ss_pred CceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--C-CHHHHHHHHHhCCCCCCcc
Q 029711 83 ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--P-SLSQVQDFLEKRPPRLSPG 159 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~-~~eel~~~~~~~~~~l~pG 159 (189)
+++++|||||||++ +.|..+++.+|.+.. . .+..+..++...+..++..+. + +.+++..+++. .+++||
T Consensus 1 ~~~v~FD~DGTL~~-~~~~~~~~~~g~~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~--~~~~pg 72 (205)
T PRK13582 1 MEIVCLDLEGVLVP-EIWIAFAEKTGIPEL-R----ATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIAT--LDPLPG 72 (205)
T ss_pred CeEEEEeCCCCChh-hHHHHHHHHcCChHH-H----HHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHh--CCCCCC
Confidence 57899999999996 577778888887532 1 123455678888777766543 2 56777777766 478999
Q ss_pred HHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 160 IDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 160 ~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.++|+.|+++ ++++|+||+.+.+++++
T Consensus 73 ~~e~L~~L~~~-~~~~IvS~~~~~~~~~~ 100 (205)
T PRK13582 73 AVEFLDWLRER-FQVVILSDTFYEFAGPL 100 (205)
T ss_pred HHHHHHHHHhc-CCEEEEeCCcHHHHHHH
Confidence 99999999999 99999999999988764
No 23
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.35 E-value=1.2e-11 Score=97.85 Aligned_cols=95 Identities=26% Similarity=0.348 Sum_probs=62.0
Q ss_pred CceEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CCCHHHH-------HHH
Q 029711 83 ADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KPSLSQV-------QDF 148 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~~~eel-------~~~ 148 (189)
+++|+|||||||+|++.. ..+++.+|.+.. .++....+ | .+..+.+...+... ..+.+++ .++
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD-KQYNTSLG-G-LSREDILRAILKLRKPGLSLETIHQLAERKNEL 77 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC-HHHHHHcC-C-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 479999999999999864 334556787643 34444344 3 45555555443322 1122221 122
Q ss_pred HH----hCCCCCCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 149 LE----KRPPRLSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 149 ~~----~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
+. .....++||+.++|+.|+++|++++|+||+
T Consensus 78 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~ 113 (185)
T TIGR02009 78 YRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS 113 (185)
T ss_pred HHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc
Confidence 22 223689999999999999999999999998
No 24
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.35 E-value=6.4e-12 Score=101.57 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=63.3
Q ss_pred EEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHH---H----HHHHHHh
Q 029711 86 VCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLS---Q----VQDFLEK 151 (189)
Q Consensus 86 vIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~e---e----l~~~~~~ 151 (189)
|||||||||+|++.. ....+++|......+.+...++ .+..+.+...+..... +.+ + +.+.+.+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIG--NGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEE 78 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhc--ccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHH
Confidence 689999999998752 3344567775322344445554 3444444443332211 211 1 2222222
Q ss_pred ---CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 152 ---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 152 ---~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
....++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 79 ~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~ 117 (213)
T TIGR01449 79 VAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARP 117 (213)
T ss_pred hccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHH
Confidence 136799999999999999999999999998876654
No 25
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.35 E-value=1.5e-11 Score=100.82 Aligned_cols=106 Identities=21% Similarity=0.242 Sum_probs=68.1
Q ss_pred cCCceEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc--cCC-CHHH-HH---HH
Q 029711 81 RTADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL--FKP-SLSQ-VQ---DF 148 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~--~~~-~~ee-l~---~~ 148 (189)
.++++|+|||||||+|++.. ..++..+|......+.+...++ ............. +.. ..++ .. +.
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLG--LRIDQVVDLWYARQPWNGPSRQEVVQRIIAR 82 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhC--CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 35899999999999999752 3355567876544345555665 3333333322211 111 2212 11 11
Q ss_pred HH---hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 149 LE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 149 ~~---~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+. .....++||+.++|+.|+++|++++|+||+....++.+
T Consensus 83 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~ 125 (222)
T PRK10826 83 VISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAV 125 (222)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHH
Confidence 11 11368999999999999999999999999988776653
No 26
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.33 E-value=1.6e-11 Score=103.66 Aligned_cols=103 Identities=21% Similarity=0.198 Sum_probs=63.3
Q ss_pred cCCceEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHH-------------HHhccCCC
Q 029711 81 RTADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAA-------------RLSLFKPS 141 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~-------------~~~~~~~~ 141 (189)
+++++|||||||||+|++. +..++..+|.+... +.....+| .+..+.+.. .++. ..+
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~-~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~ 77 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITL-EEARGPMG--LGKWDHIRALLKMPRVAARWQAVFGR-LPT 77 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCH-HHHHHhcC--CCHHHHHHHHHhcHHHHHHHHHHhCC-CCC
Confidence 4579999999999999853 22344567876443 33344444 232222211 1111 111
Q ss_pred HHHH-------HHHHH---hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 142 LSQV-------QDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 142 ~eel-------~~~~~---~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.+++ .+.+. .....++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~ 133 (267)
T PRK13478 78 EADVDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDV 133 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHH
Confidence 1211 11111 1136899999999999999999999999999876653
No 27
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.33 E-value=1.6e-11 Score=102.62 Aligned_cols=101 Identities=21% Similarity=0.225 Sum_probs=62.1
Q ss_pred CceEEEECCCcccccch------HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHH-------------HHhccCCCHH
Q 029711 83 ADAVCFDVDSTVCVDEG------IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAA-------------RLSLFKPSLS 143 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~------~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~-------------~~~~~~~~~e 143 (189)
+++|||||||||+|++. +...+..+|.+....+ ....+| .+..+.+.. .++. ..+.+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~-~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 77 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEE-ARGPMG--LGKWDHIRALLKMPAVAERWRAKFGR-LPTEA 77 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHH-HHHhcC--ccHHHHHHHHhcCHHHHHHHHHHhCC-CCCHH
Confidence 68999999999999853 2334456777544333 334443 232222211 1111 11121
Q ss_pred H-------HHHHHH---hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 144 Q-------VQDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 144 e-------l~~~~~---~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
+ +.+.+. .....++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~ 131 (253)
T TIGR01422 78 DIEAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDV 131 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHH
Confidence 1 111111 1236899999999999999999999999999877654
No 28
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.32 E-value=1.8e-11 Score=99.64 Aligned_cols=106 Identities=18% Similarity=0.179 Sum_probs=68.4
Q ss_pred cCCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC-C-CHHH-------HH
Q 029711 81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK-P-SLSQ-------VQ 146 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~-~-~~ee-------l~ 146 (189)
.++++++||+||||+|+.. +..+++.+|......+.....++ .+..+.+...+.... . +.++ +.
T Consensus 4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (226)
T PRK13222 4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVG--NGADVLVERALTWAGREPDEELLEKLRELFD 81 (226)
T ss_pred CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhC--ccHHHHHHHHHhhccCCccHHHHHHHHHHHH
Confidence 5689999999999999874 33455567765322334444454 344444444332211 1 2111 22
Q ss_pred HHHHh---CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 147 DFLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 147 ~~~~~---~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.+.. ....++||+.++|+.|+++|++++|+||+....++++
T Consensus 82 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~ 126 (226)
T PRK13222 82 RHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPL 126 (226)
T ss_pred HHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 22322 1367999999999999999999999999998776543
No 29
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.30 E-value=1.5e-11 Score=104.85 Aligned_cols=105 Identities=19% Similarity=0.173 Sum_probs=68.1
Q ss_pred cCCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc-c--CC-C---HHH----
Q 029711 81 RTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL-F--KP-S---LSQ---- 144 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~-~--~~-~---~ee---- 144 (189)
+.+++|||||||||+|++. +..+++.+|......+.....++ .+..+.+...+.. + .+ + .++
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVG--NGAPVLVRRALAGSIDHDGVDDELAEQALAL 88 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhC--hhHHHHHHHHhcccccccCCCHHHHHHHHHH
Confidence 5678999999999999965 44556678876433343444554 3444444433221 1 01 1 112
Q ss_pred HHHHHHh--CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 145 VQDFLEK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 145 l~~~~~~--~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
+.+.+.. ....++||+.++|+.|+++|++++|+||++...+++
T Consensus 89 ~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~ 133 (272)
T PRK13223 89 FMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAP 133 (272)
T ss_pred HHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHH
Confidence 2222322 125789999999999999999999999998876654
No 30
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.29 E-value=1.3e-11 Score=112.27 Aligned_cols=106 Identities=23% Similarity=0.328 Sum_probs=66.5
Q ss_pred cCCceEEEECCCcccccchH-----HHHHHHcCC-----CccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHH----H
Q 029711 81 RTADAVCFDVDSTVCVDEGI-----DELAEFCGA-----GKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQ----V 145 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~-----~~la~~~G~-----~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~ee----l 145 (189)
++++++||||||||+|++.. ....++++. .....+.+...+| .+..+.+.......... .++ +
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~l~~~~~~~~~~~~~~~~ 316 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMG--VPLPKVWEALLPDHSLEIREQTDAYF 316 (459)
T ss_pred HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcC--CChHHHHHHHhhhcchhHHHHHHHHH
Confidence 44689999999999999863 233334421 1111234555555 45555555443322111 121 2
Q ss_pred HHHH----HhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 146 QDFL----EKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 146 ~~~~----~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.+.+ .....+++||+.++|++|+++|++++|+||+.+..++.+
T Consensus 317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~ 363 (459)
T PRK06698 317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAI 363 (459)
T ss_pred HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHH
Confidence 2222 122468999999999999999999999999999887653
No 31
>PRK11590 hypothetical protein; Provisional
Probab=99.29 E-value=1.8e-11 Score=100.39 Aligned_cols=104 Identities=18% Similarity=0.195 Sum_probs=63.1
Q ss_pred CCceEEEECCCcccccchHH---HHH-HHcCCCccHHHHHHHHhCCCCCHHHHHHH-HH-------hccCC-CHHHHH--
Q 029711 82 TADAVCFDVDSTVCVDEGID---ELA-EFCGAGKAVAEWTARAMGGSVPFEEALAA-RL-------SLFKP-SLSQVQ-- 146 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~~~---~la-~~~G~~~~~~~~~~~~~gG~~~~~e~l~~-~~-------~~~~~-~~eel~-- 146 (189)
..++++|||||||++.+... ..+ .++|............++ ......... .. ....+ +.++++
T Consensus 5 ~~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig--~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 82 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIG--LGLLVKGRAARWPMSLLLWGCTFGHSEARLQAL 82 (211)
T ss_pred cceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhc--cCcccchhhhhhhHHHHHHHHHcCCCHHHHHHH
Confidence 56799999999999877533 233 566655332233334444 222111111 10 00112 333322
Q ss_pred --HH---HHhCCCCCCccHHHHH-HHHHHCCCeEEEEcCCchhhhhhc
Q 029711 147 --DF---LEKRPPRLSPGIDELV-KKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 147 --~~---~~~~~~~l~pG~~elL-~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.+ +... ..++||+.++| +.|+++|++++||||+++.+++++
T Consensus 83 ~~~f~~~~~~~-~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~i 129 (211)
T PRK11590 83 EADFVRWFRDN-VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQV 129 (211)
T ss_pred HHHHHHHHHHh-CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHH
Confidence 22 3332 46799999999 578889999999999999998865
No 32
>PLN02940 riboflavin kinase
Probab=99.26 E-value=5.2e-11 Score=106.29 Aligned_cols=104 Identities=22% Similarity=0.249 Sum_probs=68.7
Q ss_pred cCCceEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHH----HHHHH
Q 029711 81 RTADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQ----VQDFL 149 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~ee----l~~~~ 149 (189)
.++++|||||||||+|++.. ..+++.+|..... +.....+| .+..+.+...+.... ...++ +.+.+
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~-~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG-REAQKIVG--KTPLEAAATVVEDYGLPCSTDEFNSEITPLL 85 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCH-HHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 45899999999999999763 3455577876443 33455555 344444443333221 12222 22222
Q ss_pred Hh--CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 150 EK--RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 150 ~~--~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.+ ....++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 86 ~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~ 125 (382)
T PLN02940 86 SEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEA 125 (382)
T ss_pred HHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHH
Confidence 21 236789999999999999999999999998877653
No 33
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.26 E-value=8e-11 Score=93.52 Aligned_cols=104 Identities=15% Similarity=0.109 Sum_probs=64.4
Q ss_pred hhcCCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHHH----
Q 029711 79 LWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQD---- 147 (189)
Q Consensus 79 ~~~~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~eel~~---- 147 (189)
|+.+++++||||||||+|++. +..+...+|.+... +.....+| .+..+.+........ ...+++..
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~-~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE-QAMVALNG--SPTWRIAQAIIELNQADLDPHALAREKTE 77 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH-HHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 356789999999999999975 33455567876443 33444454 344444443332211 12222221
Q ss_pred HHH---hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 148 FLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 148 ~~~---~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
++. .....++|| .++|..|+++ ++++|+||+.+..++.
T Consensus 78 ~~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~ 118 (188)
T PRK10725 78 AVKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEA 118 (188)
T ss_pred HHHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHH
Confidence 121 123567886 5899999865 8999999998877654
No 34
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.25 E-value=7.2e-11 Score=93.29 Aligned_cols=94 Identities=30% Similarity=0.392 Sum_probs=60.1
Q ss_pred eEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC-C-CHHHH-------HHHH-
Q 029711 85 AVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK-P-SLSQV-------QDFL- 149 (189)
Q Consensus 85 avIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~-~-~~eel-------~~~~- 149 (189)
++||||||||+|++. +..+++.+|.+.. .+......+ .+..+.+...+.... . +.+.+ .+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~-~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFD-EEFNESLKG--VSREDSLERILDLGGKKYSEEEKEELAERKNDYYV 77 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCC-HHHHHHhcC--CChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 589999999999985 3455567787643 233344443 455555554443221 1 22111 1112
Q ss_pred ---Hh-CCCCCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 150 ---EK-RPPRLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 150 ---~~-~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.. ....++||+.++|++|+++|++++|+||+.
T Consensus 78 ~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~ 113 (185)
T TIGR01990 78 ELLKELTPADVLPGIKNLLDDLKKNNIKIALASASK 113 (185)
T ss_pred HHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc
Confidence 11 134789999999999999999999999874
No 35
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.25 E-value=8.6e-11 Score=95.99 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=66.2
Q ss_pred CCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccC--CCHHHHHHHHH----
Q 029711 82 TADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFK--PSLSQVQDFLE---- 150 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~--~~~eel~~~~~---- 150 (189)
++++++||+||||+|++. +..++..+|.+....+....+.+ .+..+.+........ .+.+++...+.
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKG--VKLYEIIDIISKEHGVTLAKAELEPVYRAEVA 80 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 589999999999999865 33455577876544444444443 555555554433222 13333332221
Q ss_pred ---hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 151 ---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 151 ---~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.....++||+.++|+.| +++++|+||+.+..++.
T Consensus 81 ~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~ 117 (221)
T PRK10563 81 RLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQH 117 (221)
T ss_pred HHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHH
Confidence 12368999999999998 49999999998876654
No 36
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.25 E-value=5.9e-11 Score=98.30 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=31.1
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
...++||+.++|+.|+++|++++|+||+.+..++.
T Consensus 91 ~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~ 125 (224)
T PRK14988 91 RAVLREDTVPFLEALKASGKRRILLTNAHPHNLAV 125 (224)
T ss_pred cCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHH
Confidence 36899999999999999999999999998776653
No 37
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.23 E-value=4.1e-11 Score=96.94 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=61.6
Q ss_pred EEEECCCcccccchH-----HHHHHH-cCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCC-HHH-HHHHHH-hCCCCC
Q 029711 86 VCFDVDSTVCVDEGI-----DELAEF-CGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPS-LSQ-VQDFLE-KRPPRL 156 (189)
Q Consensus 86 vIFDmDGTLiDse~~-----~~la~~-~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~-~ee-l~~~~~-~~~~~l 156 (189)
+||||||||+|+... ...... +|.+....+...+.++ .++.+.+.. ++. ... .+. ....++ .....+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 76 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLG--RYFPDIMRI-MGL-PLEMEEPFVRESYRLAGEVEV 76 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhC--ccHHHHHHH-cCC-CHHHHHHHHHHHHHhhccccc
Confidence 689999999999763 333344 4654322344555565 455555442 221 111 111 112222 124789
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
+||+.++|++|+++|++++|+||+....++.
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~ 107 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRARS 107 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHH
Confidence 9999999999999999999999998776654
No 38
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.21 E-value=1.4e-10 Score=94.36 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=29.8
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
..++||+.++|+.|+++|++++|+||+....+.
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~ 125 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQW 125 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHH
Confidence 589999999999999999999999999876544
No 39
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.20 E-value=1.6e-10 Score=93.50 Aligned_cols=104 Identities=21% Similarity=0.429 Sum_probs=87.3
Q ss_pred CceEEE-ECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCccHH
Q 029711 83 ADAVCF-DVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGID 161 (189)
Q Consensus 83 ~kavIF-DmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG~~ 161 (189)
.+.++| |||||++-.+..+.+...+|.+.. .........+++++.+.+...++.+..+.+++.+.+.+. +.+.||++
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf~~~e~-k~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk~-i~Idp~fK 79 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTFGPGEW-KALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLKD-IKIDPGFK 79 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhccCchHH-HHHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHhh-cccCccHH
Confidence 345555 999999998889999999998754 366677788889999999998887755667777766652 68999999
Q ss_pred HHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 162 ELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 162 elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
++++++++++++++|+|+|..++|.++
T Consensus 80 ef~e~ike~di~fiVvSsGm~~fI~~l 106 (220)
T COG4359 80 EFVEWIKEHDIPFIVVSSGMDPFIYPL 106 (220)
T ss_pred HHHHHHHHcCCCEEEEeCCCchHHHHH
Confidence 999999999999999999999999875
No 40
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.18 E-value=1.9e-10 Score=96.66 Aligned_cols=100 Identities=21% Similarity=0.283 Sum_probs=78.6
Q ss_pred eEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHHHHHHHHHhCCCCCCccHH
Q 029711 85 AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLSQVQDFLEKRPPRLSPGID 161 (189)
Q Consensus 85 avIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~eel~~~~~~~~~~l~pG~~ 161 (189)
+++||||+||+|.++...+.+.++.+....++...+-. ..+.+.+...+..+ .+ +.+++.+.++.. ++.||+.
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~--~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~i--p~~pgm~ 77 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPK--GGWTEYMDRVLQLLHEQGVTPEDIRDALRSI--PIDPGMK 77 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccc--cchHHHHHHHHHHHHHcCCCHHHHHHHHHcC--CCCccHH
Confidence 68999999999999988888888776543444443332 35666666666555 23 788888888774 8999999
Q ss_pred HHHHHH--HHCCCeEEEEcCCchhhhhhc
Q 029711 162 ELVKKL--KANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 162 elL~~L--k~~Gi~laIVSs~~~~~i~~i 188 (189)
++++.+ +..|+.++|+|.+...+|+.+
T Consensus 78 ~~l~~l~~~~~~~~~~IiSDaNs~fI~~i 106 (234)
T PF06888_consen 78 ELLRFLAKNQRGFDLIIISDANSFFIETI 106 (234)
T ss_pred HHHHHHHhcCCCceEEEEeCCcHhHHHHH
Confidence 999999 568999999999999999876
No 41
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.18 E-value=9.2e-11 Score=100.72 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=31.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
+.++||+.++|+.|+++|++++|+||+....+..
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~ 176 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSK 176 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHH
Confidence 5899999999999999999999999999876654
No 42
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.17 E-value=3.3e-10 Score=91.31 Aligned_cols=100 Identities=16% Similarity=0.167 Sum_probs=59.0
Q ss_pred ceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHH----H---------hC-C-CCCHHH----HHHHHHhccC
Q 029711 84 DAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTAR----A---------MG-G-SVPFEE----ALAARLSLFK 139 (189)
Q Consensus 84 kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~----~---------~g-G-~~~~~e----~l~~~~~~~~ 139 (189)
++|+|||||||+|++. +..+.+.+|......+.... + ++ . ..+..+ .+...+....
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 5899999999999864 34455677876433221111 1 00 0 134322 2222222221
Q ss_pred -CCH----HHHHHHHH----hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 140 -PSL----SQVQDFLE----KRPPRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 140 -~~~----eel~~~~~----~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
... +.+.++++ .....++||+.++|+.|+++|++++|+||+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~ 133 (203)
T TIGR02252 81 VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR 133 (203)
T ss_pred CCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh
Confidence 111 12233332 123478999999999999999999999998764
No 43
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.15 E-value=4.9e-10 Score=90.04 Aligned_cols=105 Identities=20% Similarity=0.199 Sum_probs=59.7
Q ss_pred CceEEEECCCcccccchHHHHH-HHcCCC-ccH---------HHHHHHHhCCC-CCHHHHHHHH----HhccCC--CHHH
Q 029711 83 ADAVCFDVDSTVCVDEGIDELA-EFCGAG-KAV---------AEWTARAMGGS-VPFEEALAAR----LSLFKP--SLSQ 144 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~~~la-~~~G~~-~~~---------~~~~~~~~gG~-~~~~e~l~~~----~~~~~~--~~ee 144 (189)
+++|+|||||||+|++.....+ +.++.. ... .........|. .++.+..... +..... ..+.
T Consensus 1 ik~viFD~dgTLiD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSVVERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDESA 80 (198)
T ss_pred CcEEEEeCCCcCccHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 4789999999999988743322 222211 000 11111122332 2443332222 222211 2222
Q ss_pred HHHHHHh-CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 145 VQDFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 145 l~~~~~~-~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
...+.+. ....++||+.++|+.|+++|++++|+||++...++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~ 124 (198)
T TIGR01428 81 ADRLAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKS 124 (198)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHH
Confidence 3333221 135789999999999999999999999999877654
No 44
>PRK09449 dUMP phosphatase; Provisional
Probab=99.14 E-value=6.1e-10 Score=91.04 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=60.1
Q ss_pred CCceEEEECCCcccccch---HHHHHHHcCCCccHHHHHHH-----------HhCCCCCHHHHHHHHH----hccCCCHH
Q 029711 82 TADAVCFDVDSTVCVDEG---IDELAEFCGAGKAVAEWTAR-----------AMGGSVPFEEALAARL----SLFKPSLS 143 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~---~~~la~~~G~~~~~~~~~~~-----------~~gG~~~~~e~l~~~~----~~~~~~~e 143 (189)
++++|+|||||||+|.+. +..+++.+|..... +.... +..|..+..+....++ ..+..+.+
T Consensus 2 ~~k~iiFDlDGTLid~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PRK09449 2 KYDWILFDADETLFHFDAFAGLQRMFSRYGVDFTA-EDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVTPG 80 (224)
T ss_pred CccEEEEcCCCchhcchhhHHHHHHHHHhCCCCcH-HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 579999999999998543 33445567765322 11111 1122233332221111 11111222
Q ss_pred HHHH----HHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 144 QVQD----FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 144 el~~----~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
++.+ .+.. ...++||+.++|+.|+ +|++++|+||+....++.
T Consensus 81 ~~~~~~~~~~~~-~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~ 126 (224)
T PRK09449 81 ELNSAFLNAMAE-ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQV 126 (224)
T ss_pred HHHHHHHHHHhh-cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHH
Confidence 2222 2223 2579999999999999 689999999998776553
No 45
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.12 E-value=3e-10 Score=93.56 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=60.5
Q ss_pred CCceEEEECCCcccccchHHHHHHHc-CCCc----cHHHHHH-----HHhCCCCCHHHHHHHHH-hccCC-CHHHHHH--
Q 029711 82 TADAVCFDVDSTVCVDEGIDELAEFC-GAGK----AVAEWTA-----RAMGGSVPFEEALAARL-SLFKP-SLSQVQD-- 147 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~~~~la~~~-G~~~----~~~~~~~-----~~~gG~~~~~e~l~~~~-~~~~~-~~eel~~-- 147 (189)
..+.++|||||||++.+++..+..+. +... ....... ....+..+... ....+ ..+.+ +.+++++
T Consensus 4 ~~~la~FDfDgTLt~~ds~~~fl~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~g~~~~~l~~~~ 82 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNALLVIPLLPIIAIALLIGGRAARWP-MSLLLWACTFGHREAHLQDLE 82 (210)
T ss_pred cCcEEEEcCCCCCccCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccccccchh-hHHHHHHHHcCCCHHHHHHHH
Confidence 56789999999999999865444322 1100 0000010 01111112111 11111 12233 4433332
Q ss_pred --HHHhC--CCCCCccHHHHHH-HHHHCCCeEEEEcCCchhhhhhcC
Q 029711 148 --FLEKR--PPRLSPGIDELVK-KLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 148 --~~~~~--~~~l~pG~~elL~-~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
+.+.. ...++||+.++|+ +++++|++++||||+++.++++++
T Consensus 83 ~~f~~~~~~~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia 129 (210)
T TIGR01545 83 ADFVAAFRDKVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY 129 (210)
T ss_pred HHHHHHHHHhCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH
Confidence 22211 2368999999996 788899999999999999998763
No 46
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.11 E-value=4.9e-10 Score=90.90 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=62.3
Q ss_pred CceEEEECCCcccccchH-----HHHHHHcCCCccHH----------HHHHHHhCCCCCHHHHHHHHH----hccCC--C
Q 029711 83 ADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVA----------EWTARAMGGSVPFEEALAARL----SLFKP--S 141 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~----------~~~~~~~gG~~~~~e~l~~~~----~~~~~--~ 141 (189)
+++|+|||||||+|+... ..+...+|...... .++..+..|..+..+....++ ..... .
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD 80 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence 579999999999998763 33444567653211 112223334444443322221 11111 2
Q ss_pred HHHHHHHHH---hCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 142 LSQVQDFLE---KRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 142 ~eel~~~~~---~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.+.+.+.+. .....++||+.++|++|+++ ++++|+||+....++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~ 128 (224)
T TIGR02254 81 EALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYK 128 (224)
T ss_pred HHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHH
Confidence 222332222 11368999999999999999 9999999998877664
No 47
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.11 E-value=3.7e-10 Score=91.07 Aligned_cols=103 Identities=14% Similarity=0.129 Sum_probs=59.1
Q ss_pred eEEEECCCcccccchH-----HHHHHHcCC-CccHHHHHHHHhC-CCC--CH---HHHHHHHHhcc------CC-CHHH-
Q 029711 85 AVCFDVDSTVCVDEGI-----DELAEFCGA-GKAVAEWTARAMG-GSV--PF---EEALAARLSLF------KP-SLSQ- 144 (189)
Q Consensus 85 avIFDmDGTLiDse~~-----~~la~~~G~-~~~~~~~~~~~~g-G~~--~~---~e~l~~~~~~~------~~-~~ee- 144 (189)
++||||||||+|++.. ....+.+|. ... .+.+...++ |.. .+ ...+...+... .. ..+.
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVT-HADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 6899999999999863 344556663 333 334444443 111 11 11111222110 01 2233
Q ss_pred ---HHHHHHhC------------CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 145 ---VQDFLEKR------------PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 145 ---l~~~~~~~------------~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.+++... ...+.+++.++|+.|+++|++++|+||+++..++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~ 139 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKF 139 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 23333321 123455669999999999999999999998877653
No 48
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.10 E-value=8.6e-10 Score=91.99 Aligned_cols=104 Identities=25% Similarity=0.230 Sum_probs=71.2
Q ss_pred hhcCCceEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC--CHHHHHHHHH-
Q 029711 79 LWRTADAVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP--SLSQVQDFLE- 150 (189)
Q Consensus 79 ~~~~~kavIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~eel~~~~~- 150 (189)
++....+++|||||||+||+. +..+...+|...+ .+...+.+| ..-.++.+..+..+.. +.+++....+
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~-~~~~~~~mG--~~~~eaa~~~~~~~~dp~s~ee~~~e~~~ 82 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYP-WDVKVKSMG--KRTSEAARLFVKKLPDPVSREEFNKEEEE 82 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCCh-HHHHHHHcC--CCHHHHHHHHHhhcCCCCCHHHHHHHHHH
Confidence 456778999999999999986 3456678888443 455555665 3334554444422222 4444332221
Q ss_pred ----h-CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 151 ----K-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 151 ----~-~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
. ....++||+.++++.|+.+|++++++|++.+...
T Consensus 83 ~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~ 122 (222)
T KOG2914|consen 83 ILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASF 122 (222)
T ss_pred HHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccH
Confidence 1 1368999999999999999999999999976654
No 49
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.09 E-value=3.8e-10 Score=90.75 Aligned_cols=104 Identities=15% Similarity=0.175 Sum_probs=63.5
Q ss_pred eEEEECCCcccccchHHHHHHH-cCC--Cc------cHHHHHHHHhCCCCCHHHHHHHHH-hccCC-CHHHHHHHHH---
Q 029711 85 AVCFDVDSTVCVDEGIDELAEF-CGA--GK------AVAEWTARAMGGSVPFEEALAARL-SLFKP-SLSQVQDFLE--- 150 (189)
Q Consensus 85 avIFDmDGTLiDse~~~~la~~-~G~--~~------~~~~~~~~~~gG~~~~~e~l~~~~-~~~~~-~~eel~~~~~--- 150 (189)
+++|||||||+++++...+... ++. .. ........+..+..+..+...... ..+.+ +.+++..+.+
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~ 80 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEFV 80 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4799999999999885443332 111 11 001112222222223333333222 23455 5555544433
Q ss_pred -h-CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 151 -K-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 151 -~-~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+ ....++||+.++|+.++++|++++|+|++++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~ 120 (202)
T TIGR01490 81 NQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPL 120 (202)
T ss_pred HHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH
Confidence 2 1246899999999999999999999999999988775
No 50
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.09 E-value=4.3e-10 Score=91.23 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=27.5
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
...++||+.++|+.|+++|++++|+||+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 367999999999999999999999999864
No 51
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.08 E-value=8.4e-10 Score=89.20 Aligned_cols=102 Identities=17% Similarity=0.076 Sum_probs=63.0
Q ss_pred ceEEEECCCcccccchHHHHHH---HcCCCcc-H------HHHHHHHhCCCCCHHHHHHHHHhccCC--CHHHHHHHHHh
Q 029711 84 DAVCFDVDSTVCVDEGIDELAE---FCGAGKA-V------AEWTARAMGGSVPFEEALAARLSLFKP--SLSQVQDFLEK 151 (189)
Q Consensus 84 kavIFDmDGTLiDse~~~~la~---~~G~~~~-~------~~~~~~~~gG~~~~~e~l~~~~~~~~~--~~eel~~~~~~ 151 (189)
.++||||||||+|.+....++. ..+.... . ...+.+...|.++..+.+......... +.+++.+.+.+
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHGWQA 80 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3799999999999865333221 2232210 0 012334445667766655444333321 33444444433
Q ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 152 RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 152 ~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
....++||+.++|+.|+++|++++|+||++...+
T Consensus 81 ~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred HHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 2246899999999999999999999999986554
No 52
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.07 E-value=6.8e-10 Score=110.18 Aligned_cols=107 Identities=23% Similarity=0.262 Sum_probs=69.1
Q ss_pred hhhcCCceEEEECCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHH----HH
Q 029711 78 QLWRTADAVCFDVDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLS----QV 145 (189)
Q Consensus 78 ~~~~~~kavIFDmDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~e----el 145 (189)
+-|+++++|||||||||+|++.. ..+++++|.+....+ ....++ .+..+.+....... .+ +.+ ++
T Consensus 70 ~~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~-~~~~~G--~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 146 (1057)
T PLN02919 70 EEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVED-FVPFMG--TGEANFLGGVASVKGVKGFDPDAAKKRF 146 (1057)
T ss_pred CcCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHH-HHHHhC--CCHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 45778999999999999999864 344567787654333 344454 44444443322211 11 211 22
Q ss_pred HHHH-Hh----CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 146 QDFL-EK----RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 146 ~~~~-~~----~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.+.+ +. ....++||+.++|++|+++|++++|+||+.+..++.
T Consensus 147 ~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~ 193 (1057)
T PLN02919 147 FEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDA 193 (1057)
T ss_pred HHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHH
Confidence 2222 11 123479999999999999999999999999877654
No 53
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.01 E-value=1.8e-09 Score=86.88 Aligned_cols=95 Identities=8% Similarity=0.033 Sum_probs=54.2
Q ss_pred CCceEEEECCCcccccch-HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH-HHHHHHh---CCCCC
Q 029711 82 TADAVCFDVDSTVCVDEG-IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ-VQDFLEK---RPPRL 156 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~-~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~ee-l~~~~~~---~~~~l 156 (189)
|+|++||||||||+|... +..+.+.+|.+. .+ +...+++.. ...+...+.......++ +..+.+. ....+
T Consensus 1 m~k~viFDlDGTLiD~~~~~~~~~~~~g~~~--~~-~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGLPYFAQKYNIPT--DH-ILKMIQDER--FRDPGELFGCDQELAKKLIEKYNNSDFIRYLSA 75 (197)
T ss_pred CCcEEEEecCCceEchhhccHHHHHhcCCCH--HH-HHHHHhHhh--hcCHHHHhcccHHHHHHHhhhhhHHHHHHhccC
Confidence 479999999999999543 445667788753 22 233333211 11112222210000111 1222211 13579
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+||+.++|+.|+++ ++++++||+..
T Consensus 76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~ 100 (197)
T PHA02597 76 YDDALDVINKLKED-YDFVAVTALGD 100 (197)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcc
Confidence 99999999999987 46788888763
No 54
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.99 E-value=5.4e-10 Score=85.88 Aligned_cols=99 Identities=26% Similarity=0.363 Sum_probs=62.4
Q ss_pred EEEECCCcccccchH-----HH-HHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHH----HHHHHHhCCCC
Q 029711 86 VCFDVDSTVCVDEGI-----DE-LAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQ----VQDFLEKRPPR 155 (189)
Q Consensus 86 vIFDmDGTLiDse~~-----~~-la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~ee----l~~~~~~~~~~ 155 (189)
|+||+||||+|++.. .. +.+.+|.... .+......+ .+..+.+...+........+ +.++.......
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEIS-AEELRELFG--KSYEEALERLLERFGIDPEEIQELFREYNLESKLQ 77 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHH-HHHHHHHTT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGEE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCC-HHHHHHHhC--CCHHHHHHHhhhccchhHHHHHHHhhhhhhhhccc
Confidence 699999999998762 11 2345555422 233333333 45555555444322111222 22322123468
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
++||+.++|+.|+++|++++|+||+....++.
T Consensus 78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~ 109 (176)
T PF13419_consen 78 PYPGVRELLERLKAKGIPLVIVSNGSRERIER 109 (176)
T ss_dssp ESTTHHHHHHHHHHTTSEEEEEESSEHHHHHH
T ss_pred hhhhhhhhhhhcccccceeEEeecCCcccccc
Confidence 99999999999999999999999999887654
No 55
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.94 E-value=4.2e-09 Score=81.12 Aligned_cols=91 Identities=21% Similarity=0.240 Sum_probs=56.1
Q ss_pred eEEEECCCcccccch-----HHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCcc
Q 029711 85 AVCFDVDSTVCVDEG-----IDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG 159 (189)
Q Consensus 85 avIFDmDGTLiDse~-----~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG 159 (189)
+++||+||||+|+.. |....+++|.. .+. +....+ ...... ..... ..+++.. +.. ....+||
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~--~~~-~~~~~g--~~~~~~-~~~~~----~~~~~~~-~~~-~~~~~~g 68 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED--FQA-LKALRG--LAEELL-YRIAT----SFEELLG-YDA-EEAYIRG 68 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhccc--HHH-HHHHHc--cChHHH-HHHHH----HHHHHhC-cch-hheeccC
Confidence 489999999999864 34455566642 222 233332 222111 11111 1222222 222 2467899
Q ss_pred HHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 160 IDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 160 ~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
+.++|+.|+++|++++|+||+.+..+..
T Consensus 69 ~~e~l~~L~~~g~~~~i~T~~~~~~~~~ 96 (154)
T TIGR01549 69 AADLLKRLKEAGIKLGIISNGSLRAQKL 96 (154)
T ss_pred HHHHHHHHHHCcCeEEEEeCCchHHHHH
Confidence 9999999999999999999999877654
No 56
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.93 E-value=3.8e-09 Score=88.90 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=59.7
Q ss_pred CCCChH-HHHhhhcCCc--eEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHH
Q 029711 69 NTLPSK-EVLQLWRTAD--AVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145 (189)
Q Consensus 69 ~~~~~~-~~~~~~~~~k--avIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel 145 (189)
.+|.|= ++.+-+...+ +|+||+||||+|+.... .+|......+.+....+ ..+.+.+
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~~l~g--~~~w~~~-------------- 105 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGF----WRGKKTFSPGSEDYLKN--QVFWEKV-------------- 105 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHH----hCCcccCCHHHhhhhcC--hHHHHHH--------------
Confidence 567663 3333344443 99999999999987644 25655322222222222 1222222
Q ss_pred HHHHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCC----chhhhhh
Q 029711 146 QDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGG----FRHMINV 187 (189)
Q Consensus 146 ~~~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~----~~~~i~~ 187 (189)
.+.... ...+++++.++|++|+++|+++++|||+ .+..++.
T Consensus 106 ~~~~~~-~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ 150 (237)
T TIGR01672 106 NNGWDE-FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKT 150 (237)
T ss_pred HHhccc-CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHH
Confidence 122222 2467788999999999999999999998 5445443
No 57
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.89 E-value=5.9e-09 Score=81.74 Aligned_cols=31 Identities=26% Similarity=0.480 Sum_probs=28.8
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
..++||+.++|+.|+++|++++|+||+....
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~ 114 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH 114 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH
Confidence 5889999999999999999999999998764
No 58
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.84 E-value=1.2e-08 Score=81.13 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=55.2
Q ss_pred ceEEEECCCcccccch-----HHHH-----HHHcCCCccHHH-HHHH---HhCCCCCHHHHHHHHHhccCCCHHHHHHHH
Q 029711 84 DAVCFDVDSTVCVDEG-----IDEL-----AEFCGAGKAVAE-WTAR---AMGGSVPFEEALAARLSLFKPSLSQVQDFL 149 (189)
Q Consensus 84 kavIFDmDGTLiDse~-----~~~l-----a~~~G~~~~~~~-~~~~---~~gG~~~~~e~l~~~~~~~~~~~eel~~~~ 149 (189)
++++|||||||+|++. +... ...+|....... .... ..+ .+....+. . ...+.+++.+.+
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g--~~~~~~~~-~---~~~~~~~~~~~~ 74 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYG--TTLAGLMI-L---HEIDADEYLRYV 74 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHc--hHHHHHHH-h---hCCCHHHHHHHH
Confidence 4799999999999863 2211 124566532111 1111 122 23333221 1 112344444444
Q ss_pred HhC----CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 150 EKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 150 ~~~----~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.+. ...++||+.++|+.|+ ++++|+||+++..+..
T Consensus 75 ~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~ 113 (184)
T TIGR01993 75 HGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARR 113 (184)
T ss_pred hccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHH
Confidence 431 3568999999999998 5799999999876654
No 59
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=98.80 E-value=4.1e-08 Score=81.73 Aligned_cols=29 Identities=14% Similarity=0.191 Sum_probs=25.8
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
..++||+.++|+.|+++ ++++|+||+...
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 67999999999999975 999999998754
No 60
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=98.77 E-value=3.3e-08 Score=77.68 Aligned_cols=96 Identities=19% Similarity=0.146 Sum_probs=53.3
Q ss_pred eEEEECCCcccccchHH-HHHH----HcCCC-------ccHHHHHHHHhCCCCCHHH----HHHHHHhccC--CCHHHHH
Q 029711 85 AVCFDVDSTVCVDEGID-ELAE----FCGAG-------KAVAEWTARAMGGSVPFEE----ALAARLSLFK--PSLSQVQ 146 (189)
Q Consensus 85 avIFDmDGTLiDse~~~-~la~----~~G~~-------~~~~~~~~~~~gG~~~~~e----~l~~~~~~~~--~~~eel~ 146 (189)
+++||+||||+|++... .... .++.. .....+....+++..++.+ .+......+. .+.+...
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 80 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPKYGE 80 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 58999999999998632 2222 22210 0012334445555555554 2333322221 1232222
Q ss_pred HHHHh-CCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 147 DFLEK-RPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 147 ~~~~~-~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.+.+. ....++||+.++|+ +++|+||+.+..++.
T Consensus 81 ~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~ 115 (175)
T TIGR01493 81 RLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQ 115 (175)
T ss_pred HHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHH
Confidence 22211 13579999999998 489999999877654
No 61
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.72 E-value=1e-07 Score=79.28 Aligned_cols=103 Identities=12% Similarity=0.151 Sum_probs=77.4
Q ss_pred CCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhcc--CC-CHHHHHHHHHhCCCCCCc
Q 029711 82 TADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLF--KP-SLSQVQDFLEKRPPRLSP 158 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~--~~-~~eel~~~~~~~~~~l~p 158 (189)
+..+++||||-||+|.++...+...++......+....+-. --|.+.+.+.+..+ .+ +.+++.+.++.. ++.|
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~--~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~i--P~~P 87 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPK--GFWNELMDRVFKELHEQGVRIAEIKQVLRSI--PIVP 87 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhccc--chHHHHHHHHHHHHHHcCCCHHHHHHHHhcC--CCCc
Confidence 44588999999999999888888887766443333332221 12555555555444 23 678888888885 8999
Q ss_pred cHHHHHHHHHHCCC-eEEEEcCCchhhhhhc
Q 029711 159 GIDELVKKLKANNK-NVYLISGGFRHMINVC 188 (189)
Q Consensus 159 G~~elL~~Lk~~Gi-~laIVSs~~~~~i~~i 188 (189)
|+.++++.+++.|. .+.|||.+...+|+.+
T Consensus 88 gmv~lik~~ak~g~~eliIVSDaNsfFIe~~ 118 (256)
T KOG3120|consen 88 GMVRLIKSAAKLGCFELIIVSDANSFFIEEI 118 (256)
T ss_pred cHHHHHHHHHhCCCceEEEEecCchhHHHHH
Confidence 99999999999995 9999999999999875
No 62
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.68 E-value=1.8e-08 Score=79.67 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=28.7
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 158 PGIDELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 158 pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
|++.++|++++++|++++|+|+++..++++++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~ 123 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA 123 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH
Confidence 56669999999999999999999999998763
No 63
>PLN02811 hydrolase
Probab=98.62 E-value=2.8e-07 Score=75.62 Aligned_cols=92 Identities=20% Similarity=0.264 Sum_probs=57.4
Q ss_pred CCCcccccchH-----HHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhc--cCC--CHHHH----HHHHHh--CCC
Q 029711 90 VDSTVCVDEGI-----DELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSL--FKP--SLSQV----QDFLEK--RPP 154 (189)
Q Consensus 90 mDGTLiDse~~-----~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~--~~~--~~eel----~~~~~~--~~~ 154 (189)
|||||+||+.. ..+...+|.... .+....++| .+..+.+...... ... ..+++ ..++.. ...
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~-~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFD-WSLKAKMMG--KKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTS 77 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCC-HHHHHHccC--CCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhC
Confidence 79999999864 344557787643 344555565 3444433333221 111 12222 122221 136
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
.++||+.++|+.|+++|++++|+||+.+..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 789999999999999999999999998653
No 64
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.55 E-value=9.4e-08 Score=69.92 Aligned_cols=35 Identities=26% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
..++||+.++|+.|+++|++++|+||+.+..++.+
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~ 57 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLEL 57 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHH
Confidence 57999999999999999999999999998877653
No 65
>PRK08238 hypothetical protein; Validated
Probab=98.50 E-value=2.3e-07 Score=85.33 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=57.4
Q ss_pred eEEEECCCcccccchHHHHHHHc-CCC-ccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCccHHH
Q 029711 85 AVCFDVDSTVCVDEGIDELAEFC-GAG-KAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGIDE 162 (189)
Q Consensus 85 avIFDmDGTLiDse~~~~la~~~-G~~-~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG~~e 162 (189)
-++||+||||+.++.+.+....+ ... ...-........|. ..+++.+....+ +.....+++||+.+
T Consensus 12 pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~----a~lK~~~a~~~~--------~d~~~lp~~pga~e 79 (479)
T PRK08238 12 PLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGK----AALKRRLARRVD--------LDVATLPYNEEVLD 79 (479)
T ss_pred CEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcH----HHHHHHHHhhcC--------CChhhCCCChhHHH
Confidence 68999999999999987766542 111 11111111122232 122222111100 01112468899999
Q ss_pred HHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 163 LVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 163 lL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+|++++++|++++|+||+++..++++
T Consensus 80 ~L~~lk~~G~~v~LaTas~~~~a~~i 105 (479)
T PRK08238 80 YLRAERAAGRKLVLATASDERLAQAV 105 (479)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 99999999999999999999988865
No 66
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=98.37 E-value=2.7e-06 Score=69.12 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=28.1
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
.+++|++.+.|+.|+.+ ++++|+||+.+....
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~ 129 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQE 129 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHH
Confidence 58999999999999999 999999998765443
No 67
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.34 E-value=7.6e-07 Score=67.74 Aligned_cols=33 Identities=21% Similarity=0.057 Sum_probs=28.8
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCC-chhhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGG-FRHMINV 187 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~-~~~~i~~ 187 (189)
.++||+.++|++|+++|++++|+||+ ...++..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~ 62 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYE 62 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHH
Confidence 47999999999999999999999999 6665543
No 68
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.18 E-value=3.7e-06 Score=70.90 Aligned_cols=29 Identities=14% Similarity=0.173 Sum_probs=26.3
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
...++||+.++|+.|+++|+++++|||..
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~ 140 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRT 140 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36799999999999999999999999953
No 69
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.17 E-value=3.7e-06 Score=63.36 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=25.7
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.++||+.++|+.|+++|++++|+||+.
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQS 51 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence 479999999999999999999999998
No 70
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.14 E-value=3.3e-06 Score=73.18 Aligned_cols=31 Identities=26% Similarity=0.216 Sum_probs=27.8
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.||+.++|++|+++|++++|+||+.+..+..
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~ 178 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVE 178 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHH
Confidence 3899999999999999999999999887654
No 71
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.13 E-value=1.8e-05 Score=68.18 Aligned_cols=48 Identities=15% Similarity=0.398 Sum_probs=43.0
Q ss_pred CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 141 ~~eel~~~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.+++.+++++....+.||+.+++++|+++|++++|+|+|+...++++
T Consensus 107 ~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~v 154 (277)
T TIGR01544 107 PKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEV 154 (277)
T ss_pred CHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHH
Confidence 577888888755689999999999999999999999999999988765
No 72
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.13 E-value=1.3e-05 Score=68.61 Aligned_cols=74 Identities=12% Similarity=0.224 Sum_probs=48.8
Q ss_pred cCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCccH
Q 029711 81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI 160 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG~ 160 (189)
.+..+||||+|+|++|.... .+... .+| .++ +.+...++.......++||+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y--~~~~~-------------~~~-~~~-------------~~~~w~~wv~~~~a~~ipGA 123 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPY--QGYQV-------------LNN-KPF-------------DPETWDKWVQAAQAKPVAGA 123 (266)
T ss_pred CCCCEEEEeCccccccChHH--HHHHh-------------cCC-CcC-------------CHHHHHHHHHcCCCCcCccH
Confidence 34679999999999986432 11110 011 010 11122333333356899999
Q ss_pred HHHHHHHHHCCCeEEEEcCCchh
Q 029711 161 DELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 161 ~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
.++|++|+++|++++++||....
T Consensus 124 ~e~L~~L~~~G~~v~iVTnR~~~ 146 (266)
T TIGR01533 124 LDFLNYANSKGVKIFYVSNRSEK 146 (266)
T ss_pred HHHHHHHHHCCCeEEEEeCCCcc
Confidence 99999999999999999998743
No 73
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.11 E-value=6.7e-07 Score=72.04 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=29.6
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCC-chhhhh
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGG-FRHMIN 186 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~-~~~~i~ 186 (189)
...++||+.++|+.|+++|++++|+||+ ....++
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~ 77 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAY 77 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHH
Confidence 3679999999999999999999999998 665543
No 74
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.04 E-value=6.4e-06 Score=71.47 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=27.6
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.||+.++|++|+++|++++|+||+.+..+..
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~ 180 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVH 180 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHH
Confidence 4899999999999999999999998877654
No 75
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.02 E-value=6.2e-06 Score=65.62 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=26.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.++||+.++|+.|+++|++++|+||++.
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3689999999999999999999999875
No 76
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.86 E-value=0.00022 Score=59.38 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=29.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
..++||+.++|+.|+++|++++|+||+.....+
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~ 126 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQK 126 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 579999999999999999999999999866443
No 77
>PLN02645 phosphoglycolate phosphatase
Probab=97.83 E-value=3.5e-05 Score=66.94 Aligned_cols=59 Identities=17% Similarity=0.334 Sum_probs=47.4
Q ss_pred CCCCChHHHHhhhcCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHH
Q 029711 68 ENTLPSKEVLQLWRTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQD 147 (189)
Q Consensus 68 ~~~~~~~~~~~~~~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~ 147 (189)
+...+.+++.++...+++++||+||||++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~D~DGtl~~~~------------------------------------------------- 43 (311)
T PLN02645 13 AQLLTLENADELIDSVETFIFDCDGVIWKGD------------------------------------------------- 43 (311)
T ss_pred cccCCHHHHHHHHHhCCEEEEeCcCCeEeCC-------------------------------------------------
Confidence 3456677888888899999999999998730
Q ss_pred HHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 148 ~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.++||+.+.|+.|+++|++++++||++.
T Consensus 44 -------~~~~ga~e~l~~lr~~g~~~~~~TN~~~ 71 (311)
T PLN02645 44 -------KLIEGVPETLDMLRSMGKKLVFVTNNST 71 (311)
T ss_pred -------ccCcCHHHHHHHHHHCCCEEEEEeCCCC
Confidence 1357888888888888888888888763
No 78
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.83 E-value=2.2e-05 Score=62.53 Aligned_cols=27 Identities=22% Similarity=0.207 Sum_probs=25.6
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.++||+.++|++|+++|++++|+||+.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 579999999999999999999999986
No 79
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.75 E-value=3.2e-05 Score=62.30 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=46.3
Q ss_pred ce-EEEECCCcccccch-HH-HHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCC-CHHHHHHHHHh----CCCC
Q 029711 84 DA-VCFDVDSTVCVDEG-ID-ELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKP-SLSQVQDFLEK----RPPR 155 (189)
Q Consensus 84 ka-vIFDmDGTLiDse~-~~-~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~-~~eel~~~~~~----~~~~ 155 (189)
+. |++||||||.|... +. .+.+.+|..... ....+.+ ... ...++.... ..+.+.+++.+ ...+
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n~~~~~~~~~---~~~~~~~-~~~----~~~~g~~~~e~~~~~~~~~~~~~~f~~l~ 73 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFNEEFGKNPEL---TPEDITG-YWD----WEKWGITEPEFYEKLWRFYEEPGFFSNLP 73 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHHHHTTTS-------GGGGTS-SSH----HHHHHHHSTTHHHHHHHHHTSTTTTTT--
T ss_pred CcEEEEECCCCCcccHHHHHHHHHHHcCCCCCC---CHHHhhh-hhH----HHHhCCCCHHHHHHHHHHHhChhhhcCCC
Confidence 45 89999999999764 33 344456655111 0000110 011 111111111 12233333321 1368
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
+.||+.|+|+.|.+.|+.+.++|+.+..
T Consensus 74 p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 9999999999999999888888877643
No 80
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.61 E-value=8.2e-05 Score=58.72 Aligned_cols=30 Identities=13% Similarity=0.304 Sum_probs=23.2
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
+.||+.++++.++++|++++++|+.+...+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~ 57 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQA 57 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHH
Confidence 357888888888888888888888875544
No 81
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.56 E-value=0.00052 Score=57.92 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=62.8
Q ss_pred hcCCceEEEECCCcccccc-----hHHHHHHHcCCCccHH---HHHHHH-------------hCCCCCHHHHHHHHHhc-
Q 029711 80 WRTADAVCFDVDSTVCVDE-----GIDELAEFCGAGKAVA---EWTARA-------------MGGSVPFEEALAARLSL- 137 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse-----~~~~la~~~G~~~~~~---~~~~~~-------------~gG~~~~~e~l~~~~~~- 137 (189)
...+++++||++|||+... .+..+++.+|.+.... ..+.+. ..|.++..+.....+..
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 4567899999999999743 2556778888872211 111111 11334444444433322
Q ss_pred cC--C-C-HHHHHH-----HHHh---CCCCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 138 FK--P-S-LSQVQD-----FLEK---RPPRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 138 ~~--~-~-~eel~~-----~~~~---~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
+. + . .++..+ .+.. ....+.+|+.++++.||++|+.++++||....
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r 141 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDR 141 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHH
Confidence 11 1 1 222221 2222 14568889999999999999999999998654
No 82
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.40 E-value=0.00012 Score=61.24 Aligned_cols=37 Identities=19% Similarity=0.344 Sum_probs=29.6
Q ss_pred HHHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 147 DFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 147 ~~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
++......+..||+.++++.++++|++|.++||-...
T Consensus 107 ~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 107 EWVASGKAPAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp HHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred HHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 3333333478999999999999999999999997654
No 83
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.23 E-value=6.5e-05 Score=60.33 Aligned_cols=29 Identities=21% Similarity=0.285 Sum_probs=20.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+.++|++.++|++|+++|++++++|....
T Consensus 44 v~lypdv~~iL~~L~~~gv~lavASRt~~ 72 (169)
T PF12689_consen 44 VSLYPDVPEILQELKERGVKLAVASRTDE 72 (169)
T ss_dssp E---TTHHHHHHHHHHCT--EEEEE--S-
T ss_pred EEeCcCHHHHHHHHHHCCCEEEEEECCCC
Confidence 68999999999999999999999996543
No 84
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.23 E-value=0.0016 Score=54.76 Aligned_cols=74 Identities=23% Similarity=0.275 Sum_probs=50.2
Q ss_pred cCCceEEEECCCcccccchHHHHHHH-cCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCcc
Q 029711 81 RTADAVCFDVDSTVCVDEGIDELAEF-CGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPG 159 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~~~la~~-~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG 159 (189)
.+..++|||+|.|++++-. ..+.+ +|... . +.+.+.++......+..||
T Consensus 75 dg~~A~V~DIDET~LsN~p--y~~~~~~g~~~-------------~---------------~~~~~~~wv~~~~apaip~ 124 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIP--YYKKHGYGTEK-------------T---------------DPTAFWLWLGKGAAPALPE 124 (229)
T ss_pred CCCcEEEEccccccccCHH--HHHHhccCCCc-------------C---------------CHHHHHHHHHcCCCCCCHH
Confidence 3678999999999998533 22221 22110 0 1112233444445689999
Q ss_pred HHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 160 IDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 160 ~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
+.++++.|+++|+++.++||-....
T Consensus 125 al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 125 GLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred HHHHHHHHHHCCCEEEEEcCCChHH
Confidence 9999999999999999999987543
No 85
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.18 E-value=0.0013 Score=56.65 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=29.9
Q ss_pred HHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 148 ~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
+......+..||+.++.+.++++|+++.++||-...
T Consensus 138 Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 138 FVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred HHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 334334688999999999999999999999998643
No 86
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.15 E-value=0.00026 Score=61.65 Aligned_cols=33 Identities=21% Similarity=0.106 Sum_probs=29.6
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
.++||+.++|+.|+++|+.++|+|++....+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~ 63 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKK 63 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Confidence 358999999999999999999999999887654
No 87
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.10 E-value=0.0026 Score=59.04 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=24.1
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
.++|.+.+.+ +++|.. +|||++++.+++|++
T Consensus 110 ~l~~~a~~~~---~~~g~~-vvVSASp~~~Vepfa 140 (497)
T PLN02177 110 DVHPETWRVF---NSFGKR-YIITASPRIMVEPFV 140 (497)
T ss_pred hcCHHHHHHH---HhCCCE-EEEECCcHHHHHHHH
Confidence 3777777654 567755 999999999999874
No 88
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.09 E-value=0.00076 Score=62.95 Aligned_cols=27 Identities=22% Similarity=0.330 Sum_probs=25.2
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
++||+.+.|+.|+++|++++|+||...
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 689999999999999999999999765
No 89
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.97 E-value=0.0011 Score=56.67 Aligned_cols=34 Identities=26% Similarity=0.239 Sum_probs=30.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
..++||+.++|+.|+++|++++++||++....+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~ 219 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEED 219 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHH
Confidence 4789999999999999999999999999877654
No 90
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.94 E-value=0.00081 Score=59.87 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=25.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
..++||+.++|++|+++|++++|+||+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 478999999999999999999999995
No 91
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=96.79 E-value=0.0049 Score=57.05 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=22.4
Q ss_pred HHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 163 LVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 163 lL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
.++..+++| +++|+|.+++-++++++
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFa 126 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFA 126 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHH
Confidence 556677888 99999999999999874
No 92
>PLN02887 hydrolase family protein
Probab=96.78 E-value=0.0021 Score=60.75 Aligned_cols=31 Identities=16% Similarity=0.092 Sum_probs=21.5
Q ss_pred CCCCChH---HHHhhhcCCceEEEECCCcccccc
Q 029711 68 ENTLPSK---EVLQLWRTADAVCFDVDSTVCVDE 98 (189)
Q Consensus 68 ~~~~~~~---~~~~~~~~~kavIFDmDGTLiDse 98 (189)
+.+-+.| .+-....++|+++|||||||++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~iKLIa~DLDGTLLn~d 323 (580)
T PLN02887 290 EKSDDRKKEGSLRFYKPKFSYIFCDMDGTLLNSK 323 (580)
T ss_pred ccccchhhhcchhhhccCccEEEEeCCCCCCCCC
Confidence 4444444 233345678999999999999864
No 93
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.34 E-value=0.0071 Score=51.46 Aligned_cols=15 Identities=33% Similarity=0.304 Sum_probs=12.6
Q ss_pred CceEEEECCCccccc
Q 029711 83 ADAVCFDVDSTVCVD 97 (189)
Q Consensus 83 ~kavIFDmDGTLiDs 97 (189)
-.+++||+||||++.
T Consensus 14 ~~li~~D~DGTLl~~ 28 (266)
T PRK10187 14 NYAWFFDLDGTLAEI 28 (266)
T ss_pred CEEEEEecCCCCCCC
Confidence 358899999999973
No 94
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.31 E-value=0.0035 Score=49.67 Aligned_cols=28 Identities=14% Similarity=0.246 Sum_probs=26.5
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.++||+.++|++|+++|++++|+||++.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5899999999999999999999999985
No 95
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.31 E-value=0.0027 Score=49.14 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=30.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
..++||+.++|++|+ ++++++|+||+.+.+++.+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~i 77 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPV 77 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHH
Confidence 578999999999999 6799999999999987754
No 96
>PRK06769 hypothetical protein; Validated
Probab=96.05 E-value=0.0057 Score=48.62 Aligned_cols=28 Identities=25% Similarity=0.290 Sum_probs=26.1
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.++||+.++|++|+++|++++|+||+..
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 5799999999999999999999999874
No 97
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.96 E-value=0.0068 Score=46.67 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=26.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.++||+.++|+.|+++|++++|+||+.+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 4799999999999999999999999873
No 98
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.93 E-value=0.062 Score=45.13 Aligned_cols=101 Identities=18% Similarity=0.268 Sum_probs=58.8
Q ss_pred cCCceEEEECCCcccccch-HH---------HHHHHcCCCccHH-HHH---HHHhCCCCCHHHHHHHHHhccCCCHHHHH
Q 029711 81 RTADAVCFDVDSTVCVDEG-ID---------ELAEFCGAGKAVA-EWT---ARAMGGSVPFEEALAARLSLFKPSLSQVQ 146 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~-~~---------~la~~~G~~~~~~-~~~---~~~~gG~~~~~e~l~~~~~~~~~~~eel~ 146 (189)
.+++.++||+|.||....+ +. ++.+++|...... +.. .+-.| .+. ..+... + ...+.+++.
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG--~t~-aGL~~~-~-~~~d~deY~ 87 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYG--LTM-AGLKAV-G-YIFDADEYH 87 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHh--HHH-HHHHHh-c-ccCCHHHHH
Confidence 3899999999999998643 22 2334667764211 111 11111 110 111110 0 011466777
Q ss_pred HHHHhC----CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 147 DFLEKR----PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 147 ~~~~~~----~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+++... ..++.|-.+.+|-.|+.++ ..+-||+.+.-+..+
T Consensus 88 ~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~ 131 (244)
T KOG3109|consen 88 RFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRI 131 (244)
T ss_pred HHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHH
Confidence 766521 2567778889998888776 889999998766543
No 99
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.77 E-value=0.0083 Score=47.44 Aligned_cols=26 Identities=19% Similarity=0.319 Sum_probs=25.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
.++||+.++|++|+++|++++|+||+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 68999999999999999999999997
No 100
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.51 E-value=0.0073 Score=49.18 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=15.4
Q ss_pred CCceEEEECCCcccccch
Q 029711 82 TADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~ 99 (189)
++|+++|||||||++++.
T Consensus 2 ~~kli~~DlDGTLl~~~~ 19 (230)
T PRK01158 2 KIKAIAIDIDGTITDKDR 19 (230)
T ss_pred ceeEEEEecCCCcCCCCC
Confidence 478999999999998753
No 101
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.50 E-value=0.018 Score=55.35 Aligned_cols=19 Identities=21% Similarity=0.123 Sum_probs=15.7
Q ss_pred cCCceEEEECCCcccccch
Q 029711 81 RTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~ 99 (189)
+..|++++|+||||++.+.
T Consensus 414 ~~~KLIfsDLDGTLLd~d~ 432 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLT 432 (694)
T ss_pred ceeeEEEEECcCCCcCCCC
Confidence 4567999999999999653
No 102
>PTZ00174 phosphomannomutase; Provisional
Probab=95.47 E-value=0.008 Score=50.30 Aligned_cols=19 Identities=26% Similarity=0.351 Sum_probs=16.4
Q ss_pred cCCceEEEECCCcccccch
Q 029711 81 RTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~ 99 (189)
+++|+++|||||||++++.
T Consensus 3 ~~~klia~DlDGTLL~~~~ 21 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRN 21 (247)
T ss_pred CCCeEEEEECcCCCcCCCC
Confidence 4689999999999999763
No 103
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.41 E-value=0.015 Score=42.40 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=24.8
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
.++||+.++|++|+++|++++++||++..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~ 42 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSR 42 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 57999999999999999999999999743
No 104
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.38 E-value=0.01 Score=47.56 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=19.4
Q ss_pred HHHhhhcCCceEEEECCCccccc
Q 029711 75 EVLQLWRTADAVCFDVDSTVCVD 97 (189)
Q Consensus 75 ~~~~~~~~~kavIFDmDGTLiDs 97 (189)
++++.++++++++||+||||++.
T Consensus 13 ~~~~~~~~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 13 DVMAKAENIRLLICDVDGVFSDG 35 (183)
T ss_pred HHHHHhhCceEEEEcCCeeeecC
Confidence 35566778999999999999985
No 105
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.28 E-value=0.042 Score=53.07 Aligned_cols=28 Identities=18% Similarity=0.357 Sum_probs=20.9
Q ss_pred CCCChHHHHhhhcC--CceEEEECCCcccc
Q 029711 69 NTLPSKEVLQLWRT--ADAVCFDVDSTVCV 96 (189)
Q Consensus 69 ~~~~~~~~~~~~~~--~kavIFDmDGTLiD 96 (189)
+.++-+.+.+.++. .++++||+||||++
T Consensus 476 ~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~ 505 (726)
T PRK14501 476 TPAAAEEIIARYRAASRRLLLLDYDGTLVP 505 (726)
T ss_pred CccCHHHHHHHHHhccceEEEEecCccccC
Confidence 34455566666654 67999999999997
No 106
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.21 E-value=0.025 Score=44.83 Aligned_cols=32 Identities=16% Similarity=0.386 Sum_probs=27.9
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCc-hhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGF-RHMIN 186 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~-~~~i~ 186 (189)
.++||+.++|+.|+++|++++|+||+. ...++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~ 75 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAK 75 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHH
Confidence 468999999999999999999999998 45444
No 107
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=95.14 E-value=0.022 Score=50.59 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=31.9
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+...||+.++|+.|+++|++++|+||+...+++.+
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~i 217 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKG 217 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHH
Confidence 56799999999999999999999999999888754
No 108
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=95.12 E-value=0.012 Score=49.50 Aligned_cols=17 Identities=29% Similarity=0.505 Sum_probs=15.0
Q ss_pred CCceEEEECCCcccccc
Q 029711 82 TADAVCFDVDSTVCVDE 98 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse 98 (189)
++|+++|||||||++++
T Consensus 1 m~kli~~DlDGTLl~~~ 17 (272)
T PRK15126 1 MARLAAFDMDGTLLMPD 17 (272)
T ss_pred CccEEEEeCCCcCcCCC
Confidence 47899999999999865
No 109
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.10 E-value=0.012 Score=49.03 Aligned_cols=26 Identities=12% Similarity=-0.050 Sum_probs=18.5
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.++++.++++.++..+..+.++++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~ 163 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHE 163 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecC
Confidence 35677778888877777777777654
No 110
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.06 E-value=0.014 Score=44.77 Aligned_cols=15 Identities=20% Similarity=0.481 Sum_probs=13.3
Q ss_pred CceEEEECCCccccc
Q 029711 83 ADAVCFDVDSTVCVD 97 (189)
Q Consensus 83 ~kavIFDmDGTLiDs 97 (189)
+|+++||+||||++.
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 479999999999975
No 111
>PRK10976 putative hydrolase; Provisional
Probab=95.04 E-value=0.013 Score=49.04 Aligned_cols=17 Identities=24% Similarity=0.274 Sum_probs=14.9
Q ss_pred CceEEEECCCcccccch
Q 029711 83 ADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~ 99 (189)
+|+++|||||||++++.
T Consensus 2 ikli~~DlDGTLl~~~~ 18 (266)
T PRK10976 2 YQVVASDLDGTLLSPDH 18 (266)
T ss_pred ceEEEEeCCCCCcCCCC
Confidence 68999999999999753
No 112
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=94.91 E-value=0.032 Score=45.82 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=27.7
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
..+|++.++|+.+-+ .+.++|=|++...+++++
T Consensus 45 ~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~ 77 (195)
T TIGR02245 45 LMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIK 77 (195)
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHH
Confidence 468999999999886 799999999988887764
No 113
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=94.89 E-value=0.02 Score=45.19 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=30.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.++||+.++|+.|++ +++++|+|++.+.+++++
T Consensus 57 v~~rPgv~efL~~l~~-~yel~I~T~~~~~yA~~v 90 (156)
T TIGR02250 57 TKLRPFLHEFLKEASK-LYEMHVYTMGTRAYAQAI 90 (156)
T ss_pred EEECCCHHHHHHHHHh-hcEEEEEeCCcHHHHHHH
Confidence 5789999999999994 499999999999998875
No 114
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=94.87 E-value=0.014 Score=48.74 Aligned_cols=19 Identities=21% Similarity=0.305 Sum_probs=16.4
Q ss_pred cCCceEEEECCCcccccch
Q 029711 81 RTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~ 99 (189)
+++|+++|||||||++++.
T Consensus 1 ~~~kli~~DlDGTLl~~~~ 19 (264)
T COG0561 1 MMIKLLAFDLDGTLLDSNK 19 (264)
T ss_pred CCeeEEEEcCCCCccCCCC
Confidence 3678999999999999764
No 115
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=94.84 E-value=0.17 Score=41.54 Aligned_cols=30 Identities=30% Similarity=0.388 Sum_probs=27.6
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
..++||++.+.|+.-++.|++++|-|+|.-
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV 130 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSV 130 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCc
Confidence 368999999999999999999999999864
No 116
>PLN02423 phosphomannomutase
Probab=94.82 E-value=0.016 Score=48.61 Aligned_cols=18 Identities=33% Similarity=0.606 Sum_probs=14.7
Q ss_pred cCCceEE-EECCCcccccc
Q 029711 81 RTADAVC-FDVDSTVCVDE 98 (189)
Q Consensus 81 ~~~kavI-FDmDGTLiDse 98 (189)
+++++++ |||||||++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~ 22 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPR 22 (245)
T ss_pred CccceEEEEeccCCCcCCC
Confidence 5667666 99999999975
No 117
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=94.73 E-value=0.017 Score=46.81 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=14.4
Q ss_pred CceEEEECCCcccccch
Q 029711 83 ADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~ 99 (189)
+|+++|||||||++.+.
T Consensus 1 ik~v~~DlDGTLl~~~~ 17 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNR 17 (215)
T ss_pred CcEEEEecCCCcCCCCc
Confidence 47899999999998653
No 118
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=94.72 E-value=0.017 Score=48.37 Aligned_cols=17 Identities=18% Similarity=0.427 Sum_probs=15.1
Q ss_pred CCceEEEECCCcccccc
Q 029711 82 TADAVCFDVDSTVCVDE 98 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse 98 (189)
++|+++|||||||++.+
T Consensus 2 ~~kli~~DlDGTLl~~~ 18 (270)
T PRK10513 2 AIKLIAIDMDGTLLLPD 18 (270)
T ss_pred ceEEEEEecCCcCcCCC
Confidence 47899999999999865
No 119
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.39 E-value=0.024 Score=47.90 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=16.8
Q ss_pred hcCCceEEEECCCcccccch
Q 029711 80 WRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse~ 99 (189)
++.++++++||||||++++.
T Consensus 4 ~~~~~lI~~DlDGTLL~~~~ 23 (271)
T PRK03669 4 LQDPLLIFTDLDGTLLDSHT 23 (271)
T ss_pred cCCCeEEEEeCccCCcCCCC
Confidence 36789999999999998653
No 120
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=94.35 E-value=0.021 Score=45.27 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=30.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.+++||+.++|+.|+++|++++|+||.....+..+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~ 160 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAI 160 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHH
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccc
Confidence 46899999999999999999999999877665543
No 121
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.31 E-value=0.11 Score=51.39 Aligned_cols=28 Identities=18% Similarity=0.390 Sum_probs=20.5
Q ss_pred CCChHHHHhhhcC--CceEEEECCCccccc
Q 029711 70 TLPSKEVLQLWRT--ADAVCFDVDSTVCVD 97 (189)
Q Consensus 70 ~~~~~~~~~~~~~--~kavIFDmDGTLiDs 97 (189)
.++-+++...++. .+++++|+||||++.
T Consensus 581 ~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~ 610 (854)
T PLN02205 581 KLSMEHIVSAYKRTTTRAILLDYDGTLMPQ 610 (854)
T ss_pred ccCHHHHHHHHHhhcCeEEEEecCCcccCC
Confidence 4555666666554 679999999999953
No 122
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.08 E-value=0.028 Score=47.49 Aligned_cols=17 Identities=24% Similarity=0.129 Sum_probs=14.9
Q ss_pred CCceEEEECCCcccccc
Q 029711 82 TADAVCFDVDSTVCVDE 98 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse 98 (189)
++|++++|+||||++++
T Consensus 3 ~~kli~~DlDGTLl~~~ 19 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHH 19 (273)
T ss_pred cceEEEEcCcccCcCCC
Confidence 58999999999999843
No 123
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.05 E-value=0.13 Score=40.81 Aligned_cols=24 Identities=21% Similarity=0.382 Sum_probs=16.8
Q ss_pred eEEEECCCcccccchHHHHHHHcC
Q 029711 85 AVCFDVDSTVCVDEGIDELAEFCG 108 (189)
Q Consensus 85 avIFDmDGTLiDse~~~~la~~~G 108 (189)
.|++|+||||+.++.+-.+....|
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G 24 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILG 24 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccC
Confidence 379999999999876444433333
No 124
>PLN02580 trehalose-phosphatase
Probab=94.04 E-value=0.14 Score=46.15 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=13.5
Q ss_pred HHhhhcCC-ceEEEECCCcccc
Q 029711 76 VLQLWRTA-DAVCFDVDSTVCV 96 (189)
Q Consensus 76 ~~~~~~~~-kavIFDmDGTLiD 96 (189)
+....+.. .+++||+||||..
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaP 132 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSP 132 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCC
Confidence 33333433 3667799999985
No 125
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=94.04 E-value=0.14 Score=43.61 Aligned_cols=75 Identities=17% Similarity=0.289 Sum_probs=49.3
Q ss_pred cCCceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHHHHHHHhCCCCCCccH
Q 029711 81 RTADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQVQDFLEKRPPRLSPGI 160 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel~~~~~~~~~~l~pG~ 160 (189)
.+.++|+.|+|-|++|.....-..-..+.+. +++....+.+.....+.||+
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f-----------------------------~pe~Wd~wV~a~~sk~vpGA 127 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGF-----------------------------TPETWDKWVQAKKSKAVPGA 127 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCC-----------------------------CccchHHHHhhcccccCccH
Confidence 3456999999999999643211111111111 12223334443346789999
Q ss_pred HHHHHHHHHCCCeEEEEcCCchhh
Q 029711 161 DELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 161 ~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
.|++++.-++|..+.-+||-.+..
T Consensus 128 ~eFl~Yvn~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 128 VEFLNYVNSNGGKIFYISNRDQEN 151 (274)
T ss_pred HHHHHHHHhcCcEEEEEeccchhc
Confidence 999999999999999999986653
No 126
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=94.00 E-value=0.043 Score=43.25 Aligned_cols=34 Identities=9% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
...+||+.++|+.|.+. +.++|.|++.+.+++++
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~i 74 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPV 74 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHH
Confidence 56899999999999987 99999999999998875
No 127
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=93.87 E-value=0.031 Score=44.71 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=16.4
Q ss_pred hcCCceEEEECCCccccc
Q 029711 80 WRTADAVCFDVDSTVCVD 97 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDs 97 (189)
++.+|+++||+||||+|.
T Consensus 4 ~~~i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 4 AKNIKLVILDVDGVMTDG 21 (169)
T ss_pred cccCeEEEEeCceeeECC
Confidence 567999999999999996
No 128
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=93.85 E-value=0.028 Score=43.81 Aligned_cols=15 Identities=20% Similarity=0.271 Sum_probs=13.3
Q ss_pred CceEEEECCCccccc
Q 029711 83 ADAVCFDVDSTVCVD 97 (189)
Q Consensus 83 ~kavIFDmDGTLiDs 97 (189)
+|+++||+||||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 478999999999993
No 129
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=93.53 E-value=0.045 Score=43.38 Aligned_cols=17 Identities=35% Similarity=0.616 Sum_probs=14.4
Q ss_pred CceEEEECCCcccccch
Q 029711 83 ADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~ 99 (189)
+++++||.||||++++.
T Consensus 1 i~~i~fDktGTLt~~~~ 17 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKM 17 (215)
T ss_dssp ESEEEEECCTTTBESHH
T ss_pred CeEEEEecCCCcccCeE
Confidence 47899999999988753
No 130
>PLN02151 trehalose-phosphatase
Probab=93.53 E-value=0.19 Score=44.98 Aligned_cols=22 Identities=23% Similarity=0.241 Sum_probs=14.7
Q ss_pred HHHhhhcCC-ceEEEECCCcccc
Q 029711 75 EVLQLWRTA-DAVCFDVDSTVCV 96 (189)
Q Consensus 75 ~~~~~~~~~-kavIFDmDGTLiD 96 (189)
+++...... .++++|+||||+.
T Consensus 89 ~~~~~~~~~~~ll~lDyDGTL~P 111 (354)
T PLN02151 89 EILHKSEGKQIVMFLDYDGTLSP 111 (354)
T ss_pred HHHHhhcCCceEEEEecCccCCC
Confidence 445554433 4667799999984
No 131
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=93.20 E-value=0.041 Score=43.91 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=18.2
Q ss_pred HhhhcCCceEEEECCCccccc
Q 029711 77 LQLWRTADAVCFDVDSTVCVD 97 (189)
Q Consensus 77 ~~~~~~~kavIFDmDGTLiDs 97 (189)
++...++|.+|||.||||+|.
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG 22 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDG 22 (170)
T ss_pred hhhhhhceEEEEeccceeecC
Confidence 345688999999999999996
No 132
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=92.95 E-value=0.042 Score=44.48 Aligned_cols=14 Identities=21% Similarity=0.330 Sum_probs=11.9
Q ss_pred EEEECCCcccccch
Q 029711 86 VCFDVDSTVCVDEG 99 (189)
Q Consensus 86 vIFDmDGTLiDse~ 99 (189)
++|||||||+|++.
T Consensus 1 i~~DlDGTLl~~~~ 14 (225)
T TIGR01482 1 IASDIDGTLTDPNR 14 (225)
T ss_pred CeEeccCccCCCCc
Confidence 58999999999753
No 133
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.78 E-value=0.063 Score=46.89 Aligned_cols=16 Identities=19% Similarity=0.061 Sum_probs=13.9
Q ss_pred CceEEEECCCcccccc
Q 029711 83 ADAVCFDVDSTVCVDE 98 (189)
Q Consensus 83 ~kavIFDmDGTLiDse 98 (189)
+|+|++||||||+|.+
T Consensus 1 ~KLIftDLDGTLLd~~ 16 (302)
T PRK12702 1 MRLVLSSLDGSLLDLE 16 (302)
T ss_pred CcEEEEeCCCCCcCCC
Confidence 5789999999999954
No 134
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.72 E-value=0.069 Score=46.60 Aligned_cols=15 Identities=20% Similarity=0.450 Sum_probs=13.7
Q ss_pred eEEEECCCcccccch
Q 029711 85 AVCFDVDSTVCVDEG 99 (189)
Q Consensus 85 avIFDmDGTLiDse~ 99 (189)
+++|||||||++++.
T Consensus 2 ~~ifD~DGvL~~g~~ 16 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK 16 (321)
T ss_pred EEEEeCcCceECCcc
Confidence 689999999999876
No 135
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.65 E-value=0.065 Score=41.18 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=14.0
Q ss_pred ceEEEECCCcccccch
Q 029711 84 DAVCFDVDSTVCVDEG 99 (189)
Q Consensus 84 kavIFDmDGTLiDse~ 99 (189)
++++||+||||+++..
T Consensus 1 ~~~~~d~dgtl~~~~~ 16 (147)
T TIGR01656 1 PALFLDRDGVINEDTV 16 (147)
T ss_pred CeEEEeCCCceeccCC
Confidence 4789999999999874
No 136
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=92.62 E-value=0.1 Score=48.83 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=32.2
Q ss_pred CCCCccHHHHHHHHHHCC-CeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANN-KNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~G-i~laIVSs~~~~~i~~i 188 (189)
..++||+.++|++|+++| ++++|+||.++..++.+
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i 418 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAV 418 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHH
Confidence 679999999999999999 99999999998887764
No 137
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=92.26 E-value=0.07 Score=42.09 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=11.7
Q ss_pred ceEEEECCCcccccch
Q 029711 84 DAVCFDVDSTVCVDEG 99 (189)
Q Consensus 84 kavIFDmDGTLiDse~ 99 (189)
|.+.||+||||+.+.+
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 5789999999998643
No 138
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=92.20 E-value=0.12 Score=48.49 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.1
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.+++||+.++|++|+++|++++|+||..+..++.+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~i 438 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAV 438 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence 56899999999999999999999999999887765
No 139
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=92.04 E-value=0.087 Score=42.32 Aligned_cols=22 Identities=18% Similarity=0.452 Sum_probs=16.0
Q ss_pred cHHHHHHHHHHCCCeEEEEcCC
Q 029711 159 GIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~ 180 (189)
-+.++++.++++++.+.+.|..
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~~ 104 (254)
T PF08282_consen 83 DVKKILKYLKEHNISFFFYTDD 104 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS
T ss_pred chhheeehhhhcccccccccce
Confidence 4567788888888777777644
No 140
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.95 E-value=0.97 Score=38.35 Aligned_cols=32 Identities=9% Similarity=0.200 Sum_probs=26.3
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
.+-+.+.++|+.|+.+|+++.-+|..+..+..
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~ 112 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMED 112 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHH
Confidence 46678999999999999999999988755443
No 141
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=91.77 E-value=0.14 Score=47.79 Aligned_cols=35 Identities=23% Similarity=0.309 Sum_probs=31.9
Q ss_pred CCCCccHHHHHHHHHHCCC-eEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNK-NVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi-~laIVSs~~~~~i~~i 188 (189)
.+++||+.++|++|+++|+ +++|+||.+...++.+
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i 396 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERV 396 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHH
Confidence 5799999999999999999 9999999998877654
No 142
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=91.69 E-value=0.1 Score=44.44 Aligned_cols=27 Identities=7% Similarity=0.080 Sum_probs=23.4
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
-++|+.++++.|+++|+ ++|+||....
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~ 170 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPW 170 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCC
Confidence 47899999999999997 7999998764
No 143
>PRK10444 UMP phosphatase; Provisional
Probab=91.54 E-value=0.1 Score=44.00 Aligned_cols=17 Identities=24% Similarity=0.296 Sum_probs=14.7
Q ss_pred CceEEEECCCcccccch
Q 029711 83 ADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~ 99 (189)
+++++||+||||++++.
T Consensus 1 ~~~v~~DlDGtL~~~~~ 17 (248)
T PRK10444 1 IKNVICDIDGVLMHDNV 17 (248)
T ss_pred CcEEEEeCCCceEeCCe
Confidence 47899999999999864
No 144
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=91.53 E-value=0.095 Score=43.56 Aligned_cols=14 Identities=29% Similarity=0.517 Sum_probs=12.1
Q ss_pred eEEEECCCcccccc
Q 029711 85 AVCFDVDSTVCVDE 98 (189)
Q Consensus 85 avIFDmDGTLiDse 98 (189)
+++|||||||++.+
T Consensus 1 li~~DlDGTLl~~~ 14 (256)
T TIGR00099 1 LIFIDLDGTLLNDD 14 (256)
T ss_pred CEEEeCCCCCCCCC
Confidence 47899999999964
No 145
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=91.24 E-value=0.11 Score=42.22 Aligned_cols=15 Identities=27% Similarity=0.202 Sum_probs=12.4
Q ss_pred eEEEECCCcccccch
Q 029711 85 AVCFDVDSTVCVDEG 99 (189)
Q Consensus 85 avIFDmDGTLiDse~ 99 (189)
.+++||||||++++.
T Consensus 1 ~i~~DlDGTLL~~~~ 15 (221)
T TIGR02463 1 WVFSDLDGTLLDSHS 15 (221)
T ss_pred CEEEeCCCCCcCCCC
Confidence 478999999999653
No 146
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.21 E-value=0.12 Score=43.42 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=14.7
Q ss_pred CceEEEECCCcccccch
Q 029711 83 ADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~ 99 (189)
+++++||+||||++...
T Consensus 1 ~~~~~~D~DGtl~~~~~ 17 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKE 17 (249)
T ss_pred CCEEEEeCCCceEcCCe
Confidence 47899999999999764
No 147
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=91.00 E-value=0.12 Score=42.91 Aligned_cols=13 Identities=23% Similarity=0.312 Sum_probs=11.4
Q ss_pred eEEEECCCccccc
Q 029711 85 AVCFDVDSTVCVD 97 (189)
Q Consensus 85 avIFDmDGTLiDs 97 (189)
+++|||||||++.
T Consensus 1 li~~DlDGTLl~~ 13 (225)
T TIGR02461 1 VIFTDLDGTLLPP 13 (225)
T ss_pred CEEEeCCCCCcCC
Confidence 4789999999985
No 148
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=90.85 E-value=0.51 Score=47.16 Aligned_cols=80 Identities=18% Similarity=0.333 Sum_probs=50.9
Q ss_pred CCCCChHHHHhhhcC--CceEEEECCCcccccchHHHHHHHcCCCccHHHHHHHHhCCCCCHHHHHHHHHhccCCCHHHH
Q 029711 68 ENTLPSKEVLQLWRT--ADAVCFDVDSTVCVDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFKPSLSQV 145 (189)
Q Consensus 68 ~~~~~~~~~~~~~~~--~kavIFDmDGTLiDse~~~~la~~~G~~~~~~~~~~~~~gG~~~~~e~l~~~~~~~~~~~eel 145 (189)
...++.+.+++.+.. ..+++||+||||+... ..+. . . . ...
T Consensus 574 ~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~---------~~P~---~---~--~-------------~~~------- 616 (934)
T PLN03064 574 PPQLPPEDAIQRYLQSNNRLLILGFNATLTEPV---------DTPG---R---R--G-------------DQI------- 616 (934)
T ss_pred CCCCCHHHHHHHHHhccceEEEEecCceeccCC---------CCcc---c---c--c-------------ccc-------
Confidence 356677777776655 4588899999998621 0000 0 0 0 000
Q ss_pred HHHHHhCCCCCCccHHHHHHHHHHC-CCeEEEEcCCchhhhhhc
Q 029711 146 QDFLEKRPPRLSPGIDELVKKLKAN-NKNVYLISGGFRHMINVC 188 (189)
Q Consensus 146 ~~~~~~~~~~l~pG~~elL~~Lk~~-Gi~laIVSs~~~~~i~~i 188 (189)
......+.|++.++|+.|.+. +..++|+||-....++.+
T Consensus 617 ----~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~ 656 (934)
T PLN03064 617 ----KEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDEN 656 (934)
T ss_pred ----cccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHH
Confidence 001135678888888888875 578999999888777654
No 149
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=90.14 E-value=0.14 Score=39.48 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=26.1
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
..++||+.++|++|. +.+.++|.|++...+++++
T Consensus 35 v~~RP~l~~FL~~l~-~~~ev~i~T~~~~~ya~~v 68 (159)
T PF03031_consen 35 VKLRPGLDEFLEELS-KHYEVVIWTSASEEYAEPV 68 (159)
T ss_dssp EEE-TTHHHHHHHHH-HHCEEEEE-SS-HHHHHHH
T ss_pred EeeCchHHHHHHHHH-HhceEEEEEeehhhhhhHH
Confidence 467999999999994 5599999999998888765
No 150
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=90.12 E-value=0.26 Score=38.32 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=22.9
Q ss_pred HHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 163 LVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 163 lL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+|++|+++|++++|+||++...+..+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~ 61 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDR 61 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHH
Confidence 89999999999999999998766543
No 151
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=90.09 E-value=0.14 Score=43.98 Aligned_cols=22 Identities=18% Similarity=0.323 Sum_probs=18.8
Q ss_pred hhhcCCceEEEECCCcccccch
Q 029711 78 QLWRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 78 ~~~~~~kavIFDmDGTLiDse~ 99 (189)
++..++++++||+||||++...
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~ 24 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNE 24 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCc
Confidence 4567899999999999999764
No 152
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.89 E-value=0.17 Score=36.80 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=12.0
Q ss_pred EEEECCCcccccch
Q 029711 86 VCFDVDSTVCVDEG 99 (189)
Q Consensus 86 vIFDmDGTLiDse~ 99 (189)
++||+||||++...
T Consensus 1 ~l~D~dGvl~~g~~ 14 (101)
T PF13344_consen 1 FLFDLDGVLYNGNE 14 (101)
T ss_dssp EEEESTTTSEETTE
T ss_pred CEEeCccEeEeCCC
Confidence 68999999999654
No 153
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.75 E-value=0.17 Score=42.62 Aligned_cols=30 Identities=13% Similarity=0.047 Sum_probs=25.7
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.++++.+.++.|+..+++++|+||+.+.+.
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~ 150 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYK 150 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCc
Confidence 467899999999999999999999876544
No 154
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=89.71 E-value=0.17 Score=40.37 Aligned_cols=14 Identities=29% Similarity=0.441 Sum_probs=12.0
Q ss_pred eEEEECCCcccccc
Q 029711 85 AVCFDVDSTVCVDE 98 (189)
Q Consensus 85 avIFDmDGTLiDse 98 (189)
+++||+||||++.+
T Consensus 1 li~~D~DgTL~~~~ 14 (204)
T TIGR01484 1 LLFFDLDGTLLDPN 14 (204)
T ss_pred CEEEeCcCCCcCCC
Confidence 47899999999865
No 155
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=89.59 E-value=0.16 Score=42.31 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=12.7
Q ss_pred eEEEECCCcccccch
Q 029711 85 AVCFDVDSTVCVDEG 99 (189)
Q Consensus 85 avIFDmDGTLiDse~ 99 (189)
+++|||||||++++.
T Consensus 1 li~~DlDGTll~~~~ 15 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG 15 (256)
T ss_pred CEEEcCCCCCcCCCC
Confidence 478999999999764
No 156
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=88.47 E-value=0.39 Score=44.19 Aligned_cols=26 Identities=23% Similarity=0.587 Sum_probs=20.0
Q ss_pred hcC-CceEEEECCCcccccchHHHHHH
Q 029711 80 WRT-ADAVCFDVDSTVCVDEGIDELAE 105 (189)
Q Consensus 80 ~~~-~kavIFDmDGTLiDse~~~~la~ 105 (189)
|++ .+.||||+||||+.++.|-.+..
T Consensus 371 wr~n~kiVVsDiDGTITkSD~~Ghv~~ 397 (580)
T COG5083 371 WRNNKKIVVSDIDGTITKSDALGHVKQ 397 (580)
T ss_pred EeCCCcEEEEecCCcEEehhhHHHHHH
Confidence 444 67899999999999998744443
No 157
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=88.00 E-value=0.24 Score=40.72 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=12.4
Q ss_pred eEEEECCCcccccch
Q 029711 85 AVCFDVDSTVCVDEG 99 (189)
Q Consensus 85 avIFDmDGTLiDse~ 99 (189)
++++||||||++++.
T Consensus 1 li~~DlDgTLl~~~~ 15 (236)
T TIGR02471 1 LIITDLDNTLLGDDE 15 (236)
T ss_pred CeEEeccccccCCHH
Confidence 478899999999653
No 158
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=87.93 E-value=0.22 Score=41.43 Aligned_cols=14 Identities=21% Similarity=0.489 Sum_probs=12.5
Q ss_pred EEEECCCcccccch
Q 029711 86 VCFDVDSTVCVDEG 99 (189)
Q Consensus 86 vIFDmDGTLiDse~ 99 (189)
++||+||||++++.
T Consensus 1 ~lfD~DGvL~~~~~ 14 (236)
T TIGR01460 1 FLFDIDGVLWLGHK 14 (236)
T ss_pred CEEeCcCccCcCCc
Confidence 58999999999875
No 159
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=87.78 E-value=0.29 Score=40.75 Aligned_cols=15 Identities=33% Similarity=0.344 Sum_probs=12.7
Q ss_pred CceEEEECCCccccc
Q 029711 83 ADAVCFDVDSTVCVD 97 (189)
Q Consensus 83 ~kavIFDmDGTLiDs 97 (189)
..+++||+||||+..
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 468899999999973
No 160
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=87.00 E-value=1.4 Score=43.27 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=20.3
Q ss_pred CCCChHHHHhhhcC--CceEEEECCCcccc
Q 029711 69 NTLPSKEVLQLWRT--ADAVCFDVDSTVCV 96 (189)
Q Consensus 69 ~~~~~~~~~~~~~~--~kavIFDmDGTLiD 96 (189)
..++-+.+++.++. ..+++||+||||+.
T Consensus 491 ~~l~~~~~~~~y~~a~~rll~LDyDGTL~~ 520 (797)
T PLN03063 491 LELPEQDVIQQYSKSNNRLLILGFYGTLTE 520 (797)
T ss_pred CCCCHHHHHHHHHhccCeEEEEecCccccC
Confidence 35566666666655 45888999999984
No 161
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=86.74 E-value=0.38 Score=39.94 Aligned_cols=29 Identities=17% Similarity=0.106 Sum_probs=24.9
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
+|++.++++.|+++|+++ |+||+...+..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~ 168 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQ 168 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccC
Confidence 689999999999999997 88999876654
No 162
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=86.40 E-value=0.62 Score=36.68 Aligned_cols=25 Identities=16% Similarity=0.534 Sum_probs=21.8
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
+.|++.+.|+.|++.|+.++|+||=
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCc
Confidence 4568999999999999999999985
No 163
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=86.38 E-value=0.94 Score=38.57 Aligned_cols=48 Identities=21% Similarity=0.421 Sum_probs=35.3
Q ss_pred CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 141 ~~eel~~~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+.+++.+..++....+++|+.++++.|+++++|+.|.|+|--..|+.+
T Consensus 76 ~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~v 123 (246)
T PF05822_consen 76 TKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEV 123 (246)
T ss_dssp BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHH
T ss_pred CHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHH
Confidence 455667777766689999999999999999999999999988877654
No 164
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=85.49 E-value=0.46 Score=36.59 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=12.9
Q ss_pred ceEEEECCCcccccch
Q 029711 84 DAVCFDVDSTVCVDEG 99 (189)
Q Consensus 84 kavIFDmDGTLiDse~ 99 (189)
|.++||+||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 5799999999999764
No 165
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=85.24 E-value=0.47 Score=37.38 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=11.8
Q ss_pred ceEEEECCCcccc
Q 029711 84 DAVCFDVDSTVCV 96 (189)
Q Consensus 84 kavIFDmDGTLiD 96 (189)
++++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999994
No 166
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=84.61 E-value=0.65 Score=40.43 Aligned_cols=20 Identities=45% Similarity=0.951 Sum_probs=17.1
Q ss_pred hcCCceEEEECCCcccccch
Q 029711 80 WRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse~ 99 (189)
|+....|+||||.||+.++.
T Consensus 119 ~~~phVIVfDlD~TLItd~~ 138 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEG 138 (297)
T ss_pred CCCCcEEEEECCCcccccCC
Confidence 67788999999999997653
No 167
>PRK06769 hypothetical protein; Validated
Probab=83.65 E-value=0.71 Score=36.51 Aligned_cols=16 Identities=25% Similarity=0.298 Sum_probs=14.1
Q ss_pred cCCceEEEECCCcccc
Q 029711 81 RTADAVCFDVDSTVCV 96 (189)
Q Consensus 81 ~~~kavIFDmDGTLiD 96 (189)
.++++++||.||||.-
T Consensus 2 ~~~~~~~~d~d~~~~~ 17 (173)
T PRK06769 2 TNIQAIFIDRDGTIGG 17 (173)
T ss_pred CCCcEEEEeCCCcccC
Confidence 5799999999999943
No 168
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=83.57 E-value=4.1 Score=34.82 Aligned_cols=47 Identities=17% Similarity=0.302 Sum_probs=36.2
Q ss_pred CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 141 ~~eel~~~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
+.+.+.++-+.. .++.||+.+.++.|.+. .+-+|+|-+.+++++++|
T Consensus 70 t~~dlrr~sE~s-a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a 116 (315)
T COG4030 70 TNRDLRRISELS-AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA 116 (315)
T ss_pred cHHHHHHHHHhh-cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH
Confidence 456666666553 68999999999988755 677888888888887654
No 169
>PLN03017 trehalose-phosphatase
Probab=83.24 E-value=0.96 Score=40.64 Aligned_cols=21 Identities=19% Similarity=0.396 Sum_probs=14.3
Q ss_pred HHHhhhcCCc-eEEEECCCccc
Q 029711 75 EVLQLWRTAD-AVCFDVDSTVC 95 (189)
Q Consensus 75 ~~~~~~~~~k-avIFDmDGTLi 95 (189)
++.......+ ++++|+||||+
T Consensus 102 ~~~~~~~~k~~llflD~DGTL~ 123 (366)
T PLN03017 102 QIMEASRGKQIVMFLDYDGTLS 123 (366)
T ss_pred HHHHHhcCCCeEEEEecCCcCc
Confidence 4455455544 55679999999
No 170
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=82.78 E-value=1.2 Score=43.30 Aligned_cols=35 Identities=14% Similarity=0.154 Sum_probs=31.8
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.+++||+.+.|+.|+++|++++++||.....++.+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~i 601 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAI 601 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 47999999999999999999999999988877665
No 171
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=81.52 E-value=0.88 Score=36.51 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=15.0
Q ss_pred hcCCceEEEECCCcccc
Q 029711 80 WRTADAVCFDVDSTVCV 96 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiD 96 (189)
..++++++||+|+||+.
T Consensus 38 ~~Gik~li~DkDNTL~~ 54 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTP 54 (168)
T ss_pred hcCceEEEEcCCCCCCC
Confidence 36799999999999985
No 172
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=81.26 E-value=1.4 Score=43.78 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.9
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+++||+.+.|+.|++.|+++.++||-....+..+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~i 561 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSI 561 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 7899999999999999999999999988776654
No 173
>PRK10671 copA copper exporting ATPase; Provisional
Probab=81.23 E-value=1.5 Score=43.24 Aligned_cols=35 Identities=11% Similarity=0.163 Sum_probs=31.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.+++||+.+.|+.|+++|++++++||.....++.+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~i 683 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAI 683 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 47899999999999999999999999998877654
No 174
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=81.18 E-value=0.57 Score=42.37 Aligned_cols=29 Identities=17% Similarity=0.189 Sum_probs=24.7
Q ss_pred CChHHHHhhhcCCceEEEECCCcccccch
Q 029711 71 LPSKEVLQLWRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 71 ~~~~~~~~~~~~~kavIFDmDGTLiDse~ 99 (189)
|-+.++.....+-|.+-||+||||||+.+
T Consensus 63 L~i~~~~~v~~~~K~i~FD~dgtlI~t~s 91 (422)
T KOG2134|consen 63 LQIFTLPKVNGGSKIIMFDYDGTLIDTKS 91 (422)
T ss_pred eEEeeccccCCCcceEEEecCCceeecCC
Confidence 55567788888899999999999999875
No 175
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=80.94 E-value=1 Score=35.51 Aligned_cols=14 Identities=21% Similarity=0.323 Sum_probs=12.7
Q ss_pred ceEEEECCCccccc
Q 029711 84 DAVCFDVDSTVCVD 97 (189)
Q Consensus 84 kavIFDmDGTLiDs 97 (189)
++++||.||||+++
T Consensus 2 ~~~~~d~dg~l~~~ 15 (161)
T TIGR01261 2 KILFIDRDGTLIEE 15 (161)
T ss_pred CEEEEeCCCCcccc
Confidence 68999999999994
No 176
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=80.63 E-value=0.9 Score=37.70 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=10.6
Q ss_pred eEEEECCCcccc
Q 029711 85 AVCFDVDSTVCV 96 (189)
Q Consensus 85 avIFDmDGTLiD 96 (189)
+|+.||||||++
T Consensus 3 li~tDlDGTLl~ 14 (249)
T TIGR01485 3 LLVSDLDNTLVD 14 (249)
T ss_pred EEEEcCCCcCcC
Confidence 577899999997
No 177
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=80.42 E-value=3.9 Score=33.19 Aligned_cols=28 Identities=14% Similarity=0.218 Sum_probs=18.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
..+..++...|..++++ .+++-+|+--+
T Consensus 71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~ 98 (194)
T COG5663 71 ALLAQLVKQVLPSLKEE-HRLIYITARKA 98 (194)
T ss_pred HHHHHHHHHHhHHHHhh-ceeeeeehhhH
Confidence 35667888888888765 55666655443
No 178
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=80.02 E-value=1.6 Score=42.30 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=31.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++||+.+.++.|++.|+++.++|+-....+..+
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~i 479 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAI 479 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 47999999999999999999999999988777654
No 179
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=79.79 E-value=2.6 Score=36.80 Aligned_cols=33 Identities=27% Similarity=0.583 Sum_probs=29.5
Q ss_pred CCCCCccHHHHHHHHHHCC-CeEEEEcCCchhhh
Q 029711 153 PPRLSPGIDELVKKLKANN-KNVYLISGGFRHMI 185 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~G-i~laIVSs~~~~~i 185 (189)
.+.++|..-++|+.+|+.| ++++|||||..+.+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv 123 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDV 123 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHH
Confidence 4789999999999999999 79999999987443
No 180
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=79.77 E-value=7 Score=35.40 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=29.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
+.-.|....+++.|+++|.++.++||++-.+++
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd 271 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVD 271 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhh
Confidence 345678899999999999999999999988775
No 181
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=78.95 E-value=1.7 Score=34.66 Aligned_cols=26 Identities=15% Similarity=0.010 Sum_probs=21.9
Q ss_pred HHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 163 LVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 163 lL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-|+.|+++|++++|+||+....++.+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHH
Confidence 46778899999999999998877653
No 182
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=77.82 E-value=1.3 Score=38.01 Aligned_cols=17 Identities=18% Similarity=0.141 Sum_probs=14.0
Q ss_pred cCCceEEEECCCccccc
Q 029711 81 RTADAVCFDVDSTVCVD 97 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDs 97 (189)
.+.++++||+||||.+-
T Consensus 16 a~~~~~~lDyDGTl~~i 32 (266)
T COG1877 16 ARKRLLFLDYDGTLTEI 32 (266)
T ss_pred ccceEEEEecccccccc
Confidence 34579999999999884
No 183
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=77.82 E-value=1.8 Score=34.87 Aligned_cols=17 Identities=24% Similarity=0.265 Sum_probs=15.5
Q ss_pred cCCceEEEECCCccccc
Q 029711 81 RTADAVCFDVDSTVCVD 97 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDs 97 (189)
.+++++++|+|.||+.=
T Consensus 26 ~Gikgvi~DlDNTLv~w 42 (175)
T COG2179 26 HGIKGVILDLDNTLVPW 42 (175)
T ss_pred cCCcEEEEeccCceecc
Confidence 78999999999999973
No 184
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=77.77 E-value=2.8 Score=32.48 Aligned_cols=32 Identities=16% Similarity=0.071 Sum_probs=28.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
...|+.+...|..|+++|++++++|+++..-+
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~i 74 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQI 74 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHH
Confidence 46899999999999999999999999976543
No 185
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=77.55 E-value=1.6 Score=33.55 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=13.7
Q ss_pred CceEEEECCCcccccc
Q 029711 83 ADAVCFDVDSTVCVDE 98 (189)
Q Consensus 83 ~kavIFDmDGTLiDse 98 (189)
.+.+++|+||||+.+.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 4578999999999974
No 186
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=77.47 E-value=3.4 Score=33.36 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=30.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
....|.+.+-++.+++.|+++.|+||+.+.-+..+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~ 79 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARA 79 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhh
Confidence 56889999999999999999999999988766643
No 187
>COG4996 Predicted phosphatase [General function prediction only]
Probab=77.46 E-value=1.3 Score=34.64 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=12.7
Q ss_pred ceEEEECCCcccccc
Q 029711 84 DAVCFDVDSTVCVDE 98 (189)
Q Consensus 84 kavIFDmDGTLiDse 98 (189)
.+++||.|||+.|.-
T Consensus 1 ~~i~~d~d~t~wdhh 15 (164)
T COG4996 1 RAIVFDADKTLWDHH 15 (164)
T ss_pred CcEEEeCCCcccccc
Confidence 378999999999953
No 188
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=76.55 E-value=2.4 Score=33.32 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=18.8
Q ss_pred HHHhhhcCCceEEEECCCcccccch
Q 029711 75 EVLQLWRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 75 ~~~~~~~~~kavIFDmDGTLiDse~ 99 (189)
++++ ..++++++||+||||++...
T Consensus 18 ~~~~-~~~v~~vv~D~Dgtl~~~~~ 41 (170)
T TIGR01668 18 DLLK-KVGIKGVVLDKDNTLVYPDH 41 (170)
T ss_pred HHHH-HCCCCEEEEecCCccccCCC
Confidence 4555 36889999999999997543
No 189
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=76.30 E-value=2.8 Score=40.65 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=31.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++||+.+.++.||+.|+++.++||-....+..+
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aI 478 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAI 478 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 36899999999999999999999999887776654
No 190
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=76.22 E-value=3.2 Score=33.75 Aligned_cols=26 Identities=15% Similarity=0.342 Sum_probs=24.1
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
.+.||+.+.+..|++.|++++||||-
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQ 56 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQ 56 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECC
Confidence 57899999999999999999999993
No 191
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=75.32 E-value=3.7 Score=31.33 Aligned_cols=30 Identities=13% Similarity=0.000 Sum_probs=26.4
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
.+.+++.+.|+.|+++|+.++++|+-+...
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 477899999999999999999999987654
No 192
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=74.77 E-value=3.3 Score=36.32 Aligned_cols=29 Identities=28% Similarity=0.594 Sum_probs=26.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+.++|.+.++++.++++|+.++|.|||..
T Consensus 141 PlL~p~l~eli~~~k~~Gi~~~L~TNG~~ 169 (322)
T PRK13762 141 PTLYPYLPELIEEFHKRGFTTFLVTNGTR 169 (322)
T ss_pred ccchhhHHHHHHHHHHcCCCEEEECCCCC
Confidence 56789999999999999999999999964
No 193
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=73.56 E-value=2.2 Score=33.43 Aligned_cols=19 Identities=16% Similarity=0.186 Sum_probs=15.5
Q ss_pred cCCceEEEECCCcccccch
Q 029711 81 RTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~ 99 (189)
.+...+++|+|.||+.+..
T Consensus 4 ~~kl~LVLDLDeTLihs~~ 22 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTK 22 (156)
T ss_pred CCceEEEEeCCCCcccccc
Confidence 4456789999999999864
No 194
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=73.53 E-value=1.8 Score=34.28 Aligned_cols=30 Identities=23% Similarity=0.479 Sum_probs=24.8
Q ss_pred HHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 148 FLEKRPPRLSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 148 ~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
+++. ..+.|+++++++.|-+. +.++|||.+
T Consensus 63 fFRn--L~V~p~aq~v~keLt~~-y~vYivtaa 92 (180)
T COG4502 63 FFRN--LGVQPFAQTVLKELTSI-YNVYIVTAA 92 (180)
T ss_pred hhhh--cCccccHHHHHHHHHhh-heEEEEEec
Confidence 4444 57899999999999755 899999987
No 195
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=73.39 E-value=2.2 Score=37.37 Aligned_cols=26 Identities=27% Similarity=0.423 Sum_probs=21.5
Q ss_pred HHHHhhhcCCceEEEECCCcccccch
Q 029711 74 KEVLQLWRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 74 ~~~~~~~~~~kavIFDmDGTLiDse~ 99 (189)
++.-++..+++.++||+||+|+..+.
T Consensus 13 ~~~~e~l~~~DtfifDcDGVlW~g~~ 38 (306)
T KOG2882|consen 13 EEARELLDSFDTFIFDCDGVLWLGEK 38 (306)
T ss_pred HHHHHHHhhcCEEEEcCCcceeecCC
Confidence 45566778899999999999999764
No 196
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=73.35 E-value=3.5 Score=39.91 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=31.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++||+.+.+++||+.|+++.++||-....+..+
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aI 474 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATI 474 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 47999999999999999999999999887766654
No 197
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=72.63 E-value=3.6 Score=40.18 Aligned_cols=35 Identities=9% Similarity=0.134 Sum_probs=30.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++.+.|+.|++.|+++.++||-....+..+
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 37899999999999999999999999887666554
No 198
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=72.28 E-value=3.7 Score=35.40 Aligned_cols=48 Identities=21% Similarity=0.386 Sum_probs=40.8
Q ss_pred CHHHHHHHHHhCCCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 141 SLSQVQDFLEKRPPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 141 ~~eel~~~~~~~~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+..++.++.++....+++|..++++.|+.+++++.|.|.|.-..++.+
T Consensus 124 ~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev 171 (298)
T KOG3128|consen 124 SKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEV 171 (298)
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHH
Confidence 467777887766678999999999999999999999999987776643
No 199
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=70.96 E-value=4.3 Score=40.56 Aligned_cols=35 Identities=14% Similarity=0.295 Sum_probs=30.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++||+.+.|+.|++.|+++.++||-....+..+
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~i 570 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI 570 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 47899999999999999999999999876555443
No 200
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=70.89 E-value=4.1 Score=32.40 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=22.8
Q ss_pred HHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 162 ELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 162 elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
..++.|+++|++++|+||.+...+.++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~ 81 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDR 81 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHH
Confidence 477888999999999999988777654
No 201
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=69.69 E-value=4.8 Score=33.14 Aligned_cols=30 Identities=10% Similarity=0.194 Sum_probs=23.1
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
+.+-+.++|+.+..+|-.++.+|+..+--+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~ 144 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKT 144 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcc
Confidence 445577888888999999999998765433
No 202
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=69.51 E-value=3.5 Score=34.55 Aligned_cols=14 Identities=21% Similarity=0.245 Sum_probs=11.9
Q ss_pred CceEEEECCCcccc
Q 029711 83 ADAVCFDVDSTVCV 96 (189)
Q Consensus 83 ~kavIFDmDGTLiD 96 (189)
.++++.|+||||++
T Consensus 2 ~~ll~sDlD~Tl~~ 15 (247)
T PF05116_consen 2 PRLLASDLDGTLID 15 (247)
T ss_dssp SEEEEEETBTTTBH
T ss_pred CEEEEEECCCCCcC
Confidence 45789999999994
No 203
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=69.43 E-value=3 Score=32.71 Aligned_cols=15 Identities=20% Similarity=0.423 Sum_probs=13.2
Q ss_pred ceEEEECCCcccccc
Q 029711 84 DAVCFDVDSTVCVDE 98 (189)
Q Consensus 84 kavIFDmDGTLiDse 98 (189)
+.+++|+|+||+.+.
T Consensus 2 ~~lvlDLDeTLi~~~ 16 (162)
T TIGR02251 2 KTLVLDLDETLVHST 16 (162)
T ss_pred cEEEEcCCCCcCCCC
Confidence 578999999999874
No 204
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=69.01 E-value=4.8 Score=37.14 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=25.8
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
...|.+..+|+.||+.|.++.|+|||.-.+++.+
T Consensus 183 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~ 216 (448)
T PF05761_consen 183 HKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAV 216 (448)
T ss_dssp E--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHH
T ss_pred cCCchHHHHHHHHHhcCceEEEecCCCCchhhhh
Confidence 3468999999999999999999999998887653
No 205
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=67.80 E-value=5.9 Score=38.70 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-.++|++.+.|+.||++|+++.++||=.+..++.+
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~i 570 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAI 570 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 47999999999999999999999999988877665
No 206
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=67.59 E-value=5.4 Score=39.62 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=30.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++.+.|+.|++.|+++.++||-....+..+
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aI 548 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI 548 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 36899999999999999999999999877666544
No 207
>PTZ00445 p36-lilke protein; Provisional
Probab=66.33 E-value=2.6 Score=35.24 Aligned_cols=29 Identities=7% Similarity=-0.141 Sum_probs=22.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+...++-.+=++..++.|+....++++..
T Consensus 181 ~LFIDD~~~NVeaA~~lGi~ai~f~~~e~ 209 (219)
T PTZ00445 181 ILFIDDDMNNCKNALKEGYIALHVTGNEG 209 (219)
T ss_pred eEeecCCHHHHHHHHHCCCEEEEcCChHh
Confidence 34667777778888889999988887644
No 208
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=66.07 E-value=7.2 Score=34.22 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=27.1
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
-.+.||+.|.++.|++.|..+.++||....
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStk 66 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTK 66 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcc
Confidence 468999999999999999999999998653
No 209
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=65.93 E-value=3.1 Score=34.27 Aligned_cols=12 Identities=25% Similarity=0.202 Sum_probs=7.4
Q ss_pred EEECCCcccccc
Q 029711 87 CFDVDSTVCVDE 98 (189)
Q Consensus 87 IFDmDGTLiDse 98 (189)
+||+||||.+-.
T Consensus 1 ~lDyDGTL~p~~ 12 (235)
T PF02358_consen 1 FLDYDGTLAPIV 12 (235)
T ss_dssp EEE-TTTSS---
T ss_pred CcccCCccCCCC
Confidence 689999999843
No 210
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=65.78 E-value=5.7 Score=33.19 Aligned_cols=29 Identities=28% Similarity=0.267 Sum_probs=25.9
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+.+.+++.++++.+++.|+++.|-|||..
T Consensus 83 Pll~~~l~~li~~l~~~g~~v~leTNGtl 111 (238)
T TIGR03365 83 PALQKPLGELIDLGKAKGYRFALETQGSV 111 (238)
T ss_pred hhhhHhHHHHHHHHHHCCCCEEEECCCCC
Confidence 44668999999999999999999999974
No 211
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=65.20 E-value=5.8 Score=39.64 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=30.1
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++.+.|+.|++.|+++.++||-....+..+
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aI 583 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKI 583 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 36899999999999999999999999877665544
No 212
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=65.00 E-value=6.6 Score=39.96 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=30.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++.+.|+.|++.|+++.++||-....+..+
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~i 679 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAI 679 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHH
Confidence 47999999999999999999999999877665544
No 213
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=64.53 E-value=7.5 Score=35.77 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=30.8
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-++.|++.+.+++|++.|+++.++|+-....+..+
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~i 380 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAI 380 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 47999999999999999999999999987766543
No 214
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=64.10 E-value=6.4 Score=39.34 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=30.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++.+.|+.|++.|+++.++||-....+..+
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 583 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKV 583 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 36899999999999999999999999876665544
No 215
>PLN02382 probable sucrose-phosphatase
Probab=63.98 E-value=3.9 Score=37.14 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=10.9
Q ss_pred eEEEECCCccccc
Q 029711 85 AVCFDVDSTVCVD 97 (189)
Q Consensus 85 avIFDmDGTLiDs 97 (189)
+|+-||||||+++
T Consensus 11 lI~sDLDGTLL~~ 23 (413)
T PLN02382 11 MIVSDLDHTMVDH 23 (413)
T ss_pred EEEEcCCCcCcCC
Confidence 5566999999986
No 216
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=63.88 E-value=7.5 Score=38.94 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=30.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
+++|++.+.|+.|++.|+++.++||-....+..+
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i 612 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 612 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHH
Confidence 7899999999999999999999999877665544
No 217
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=63.09 E-value=5.5 Score=33.08 Aligned_cols=37 Identities=24% Similarity=0.212 Sum_probs=25.0
Q ss_pred cccchhhhccccCCCCCCChHHHHhhhcCCceEEEECCCcccc
Q 029711 54 ASVQPLEASALGRSENTLPSKEVLQLWRTADAVCFDVDSTVCV 96 (189)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kavIFDmDGTLiD 96 (189)
++++.+++...-.|.|..|- ..=-+.|-||||||++-
T Consensus 35 kavsaqq~KEq~~~nN~~Pm------TGFE~~v~~D~~GT~m~ 71 (271)
T PF06901_consen 35 KAVSAQQAKEQTSFNNPEPM------TGFEHTVTFDFQGTKMV 71 (271)
T ss_pred ccccchhhhhhcccCCCCCc------ccceeeEEEeccceEEE
Confidence 34445566666677888772 22235788999999975
No 218
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=61.56 E-value=5.6 Score=32.87 Aligned_cols=22 Identities=14% Similarity=0.108 Sum_probs=18.2
Q ss_pred hhhcCCceEEEECCCcccccch
Q 029711 78 QLWRTADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 78 ~~~~~~kavIFDmDGTLiDse~ 99 (189)
++..++++++||+||||++...
T Consensus 3 ~~~~~~~~~~~D~dG~l~~~~~ 24 (242)
T TIGR01459 3 DLINDYDVFLLDLWGVIIDGNH 24 (242)
T ss_pred hhhhcCCEEEEecccccccCCc
Confidence 3557799999999999998653
No 219
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=61.32 E-value=7.8 Score=39.14 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=30.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-++.|++.+.|+.|+++|+++.++||-....+..+
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~i 601 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAI 601 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 47899999999999999999999999887665543
No 220
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=59.51 E-value=10 Score=38.53 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=30.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-++.|++.+.|+.|++.|+++.++||-....+..+
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~i 689 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHV 689 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 47999999999999999999999999876655443
No 221
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=56.61 E-value=13 Score=27.03 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=25.7
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.-.+.+.+.++.+|++|.++..+|+....-+
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 3567899999999999999999999765443
No 222
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=56.03 E-value=13 Score=32.30 Aligned_cols=29 Identities=45% Similarity=0.690 Sum_probs=26.2
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.+.+.|.+.++++.++++|..+.|+|||.
T Consensus 82 EPLL~pdl~eiv~~~~~~g~~v~l~TNG~ 110 (318)
T TIGR03470 82 EPLLHPEIDEIVRGLVARKKFVYLCTNAL 110 (318)
T ss_pred cccccccHHHHHHHHHHcCCeEEEecCce
Confidence 35688999999999999999999999996
No 223
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=54.53 E-value=16 Score=31.91 Aligned_cols=28 Identities=29% Similarity=0.392 Sum_probs=25.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
+.+.|++.++++.++++|+.+.|.|||.
T Consensus 64 Pll~~~~~~ii~~~~~~g~~~~l~TNG~ 91 (358)
T TIGR02109 64 PLARPDLVELVAHARRLGLYTNLITSGV 91 (358)
T ss_pred ccccccHHHHHHHHHHcCCeEEEEeCCc
Confidence 5678999999999999999999999996
No 224
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=53.80 E-value=7.1 Score=34.80 Aligned_cols=19 Identities=21% Similarity=0.281 Sum_probs=16.2
Q ss_pred hcCCceEEEECCCcccccc
Q 029711 80 WRTADAVCFDVDSTVCVDE 98 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse 98 (189)
+.+++++-||||.||+.=.
T Consensus 9 l~~i~~~GFDmDyTLa~Y~ 27 (343)
T TIGR02244 9 LEKIQVFGFDMDYTLAQYK 27 (343)
T ss_pred cccCCEEEECccccccccC
Confidence 3679999999999999843
No 225
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=53.65 E-value=16 Score=26.47 Aligned_cols=30 Identities=7% Similarity=0.010 Sum_probs=24.7
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
-.+.+.+.++.+|++|.++..+|+.+..-+
T Consensus 58 ~t~e~~~~~~~a~~~g~~vi~iT~~~~s~l 87 (126)
T cd05008 58 ETADTLAALRLAKEKGAKTVAITNVVGSTL 87 (126)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChH
Confidence 456788999999999999999999865443
No 226
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=51.77 E-value=12 Score=37.89 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=29.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINV 187 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~ 187 (189)
-++.||+.+.|+.|++.|+++.++||-....+..
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~ 663 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAIN 663 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHH
Confidence 4799999999999999999999999976655443
No 227
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=51.30 E-value=20 Score=28.25 Aligned_cols=29 Identities=24% Similarity=0.461 Sum_probs=24.9
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+.+.|.+.++++.+++.|+.+.|.||+..
T Consensus 73 Pll~~~l~~li~~~~~~g~~v~i~TNg~~ 101 (191)
T TIGR02495 73 PTLQAGLPDFLRKVRELGFEVKLDTNGSN 101 (191)
T ss_pred ccCcHhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 45677888999999999999999999964
No 228
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=51.14 E-value=9 Score=31.13 Aligned_cols=17 Identities=29% Similarity=0.517 Sum_probs=14.1
Q ss_pred CCceEEEECCCcccccc
Q 029711 82 TADAVCFDVDSTVCVDE 98 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse 98 (189)
..+++++|-||||...-
T Consensus 4 ~~k~lflDRDGtin~d~ 20 (181)
T COG0241 4 DQKALFLDRDGTINIDK 20 (181)
T ss_pred CCcEEEEcCCCceecCC
Confidence 36899999999998743
No 229
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=49.87 E-value=18 Score=36.31 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=30.8
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
.-++.|++.+.|+.|++.|+++.++||=....+..+
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aI 580 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAI 580 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHH
Confidence 358999999999999999999999999776655443
No 230
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=49.84 E-value=11 Score=31.95 Aligned_cols=18 Identities=28% Similarity=0.458 Sum_probs=15.1
Q ss_pred CCceEEEECCCcccccch
Q 029711 82 TADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 82 ~~kavIFDmDGTLiDse~ 99 (189)
.+++++||+||||+++..
T Consensus 1 ~~~~~~~D~DGtl~~~~~ 18 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGER 18 (279)
T ss_pred CccEEEEeCCCceEcCCe
Confidence 368999999999998653
No 231
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=48.92 E-value=19 Score=29.65 Aligned_cols=29 Identities=7% Similarity=0.106 Sum_probs=24.3
Q ss_pred CCCCcc-HHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPG-IDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG-~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+.+.++ +.++++.+|+.|+.++|.|||..
T Consensus 49 Pllq~~fl~~l~~~~k~~gi~~~leTnG~~ 78 (213)
T PRK10076 49 VLMQAEFATRFLQRLRLWGVSCAIETAGDA 78 (213)
T ss_pred HHcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 345566 58999999999999999999954
No 232
>PTZ00445 p36-lilke protein; Provisional
Probab=48.66 E-value=17 Score=30.42 Aligned_cols=30 Identities=20% Similarity=0.342 Sum_probs=25.8
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
.+.|.+..++..|++.|++++|||=+....
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 468889999999999999999999776543
No 233
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=48.63 E-value=22 Score=31.44 Aligned_cols=28 Identities=29% Similarity=0.430 Sum_probs=25.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
+.+.|++.++++.++++|+.+.|.|||.
T Consensus 73 Pll~~~~~~il~~~~~~g~~~~i~TNG~ 100 (378)
T PRK05301 73 PLLRKDLEELVAHARELGLYTNLITSGV 100 (378)
T ss_pred cCCchhHHHHHHHHHHcCCcEEEECCCc
Confidence 5678999999999999999999999995
No 234
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=48.50 E-value=11 Score=31.69 Aligned_cols=15 Identities=33% Similarity=0.428 Sum_probs=12.2
Q ss_pred ceEEEECCCcccccc
Q 029711 84 DAVCFDVDSTVCVDE 98 (189)
Q Consensus 84 kavIFDmDGTLiDse 98 (189)
-+++||.||||.-..
T Consensus 12 ~l~lfdvdgtLt~~r 26 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPR 26 (252)
T ss_pred eEEEEecCCcccccc
Confidence 478899999998743
No 235
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=47.83 E-value=19 Score=36.14 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=30.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++...+..||+.|++++++||-.+..++.+
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~sv 756 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSV 756 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHH
Confidence 47999999999999999999999999887666544
No 236
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=47.80 E-value=15 Score=31.24 Aligned_cols=29 Identities=21% Similarity=0.165 Sum_probs=25.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
..-.+.+.++++.+|++|+++++.|||+-
T Consensus 95 ~~q~e~~~~~~~~ake~Gl~~~l~TnG~~ 123 (260)
T COG1180 95 TLQAEFALDLLRAAKERGLHVALDTNGFL 123 (260)
T ss_pred hhhHHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 45567889999999999999999999963
No 237
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=47.20 E-value=9.6 Score=34.82 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=22.5
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 158 PGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 158 pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
+-...+|..++..|.++.++||+.-.+.+
T Consensus 201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd 229 (424)
T KOG2469|consen 201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTD 229 (424)
T ss_pred CccccchHHHHhhccceEEeeccccchhh
Confidence 34455899999999999999998655443
No 238
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=46.34 E-value=13 Score=31.74 Aligned_cols=16 Identities=19% Similarity=0.183 Sum_probs=12.5
Q ss_pred cCCceEEEECCCcccc
Q 029711 81 RTADAVCFDVDSTVCV 96 (189)
Q Consensus 81 ~~~kavIFDmDGTLiD 96 (189)
.+..+|+-|+||||++
T Consensus 5 ~~~~lIFtDlD~TLl~ 20 (274)
T COG3769 5 QMPLLIFTDLDGTLLP 20 (274)
T ss_pred ccceEEEEcccCcccC
Confidence 3455666699999999
No 239
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=45.00 E-value=15 Score=30.85 Aligned_cols=17 Identities=12% Similarity=0.429 Sum_probs=14.3
Q ss_pred CceEEEECCCcccccch
Q 029711 83 ADAVCFDVDSTVCVDEG 99 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~ 99 (189)
+|+++||+||||++.+.
T Consensus 1 ~k~i~~D~DGtl~~~~~ 17 (257)
T TIGR01458 1 VKGVLLDISGVLYISDA 17 (257)
T ss_pred CCEEEEeCCCeEEeCCC
Confidence 47899999999998654
No 240
>COG4275 Uncharacterized conserved protein [Function unknown]
Probab=44.84 E-value=22 Score=27.53 Aligned_cols=43 Identities=23% Similarity=0.265 Sum_probs=33.7
Q ss_pred CCChHHHHhhhcCCceEEEECCCcccccc----hHHHHHHHcCCCcc
Q 029711 70 TLPSKEVLQLWRTADAVCFDVDSTVCVDE----GIDELAEFCGAGKA 112 (189)
Q Consensus 70 ~~~~~~~~~~~~~~kavIFDmDGTLiDse----~~~~la~~~G~~~~ 112 (189)
.+++.+++..-+...++=||+||+-+..- +++.+.+++|++.+
T Consensus 32 ~v~~~~v~~~~~~fgAvpfdi~gv~~th~~e~~sFd~~l~~fgLd~p 78 (143)
T COG4275 32 FVEPAEVLAVGKEFGAVPFDIDGVELTHVGERCSFDTMLAKFGLDGP 78 (143)
T ss_pred eecchhccchhhhcCCcceeecceeEEeeeeeecHHHHHHHhCCCcH
Confidence 46777777777888999999999987642 37788888998754
No 241
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=44.82 E-value=24 Score=27.54 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=25.8
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
.-.+.+.+.++.+|++|.++..+|+.....+.
T Consensus 83 G~t~~~i~~~~~ak~~g~~ii~IT~~~~s~la 114 (179)
T TIGR03127 83 GETESLVTVAKKAKEIGATVAAITTNPESTLG 114 (179)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEECCCCCchH
Confidence 34677889999999999999999997654443
No 242
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=44.66 E-value=26 Score=25.68 Aligned_cols=30 Identities=10% Similarity=-0.058 Sum_probs=24.9
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
-.+.+.+.++.+|++|.++..+|+.....+
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPL 88 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcH
Confidence 467889999999999999999998765443
No 243
>COG4996 Predicted phosphatase [General function prediction only]
Probab=44.39 E-value=21 Score=28.01 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=26.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
..++|.+++++.+++..|+-+..+|=+...
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~ 69 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFED 69 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchH
Confidence 679999999999999999999999866543
No 244
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=43.86 E-value=26 Score=25.23 Aligned_cols=29 Identities=14% Similarity=0.083 Sum_probs=23.9
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.+.+.++++.++++|.+++++|+.....+
T Consensus 73 ~~~~~~~~~~a~~~g~~iv~iT~~~~~~l 101 (139)
T cd05013 73 TKETVEAAEIAKERGAKVIAITDSANSPL 101 (139)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCCCChh
Confidence 46688999999999999999999765433
No 245
>PLN03190 aminophospholipid translocase; Provisional
Probab=43.49 E-value=24 Score=36.45 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=28.7
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
-++.||+.+.|+.|++.|+++.++||-....+.
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi 757 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAI 757 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 479999999999999999999999997655443
No 246
>PLN03017 trehalose-phosphatase
Probab=43.31 E-value=28 Score=31.33 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=28.9
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
..+.|++.+.|+.|. +|++++|+||.....+..+
T Consensus 132 a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 132 AFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred ccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHh
Confidence 368899999999999 8899999999988776643
No 247
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=42.79 E-value=25 Score=35.32 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=30.9
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+.+||+.+.++.|+..|+++-.||+-.-.-++.+
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAI 680 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAI 680 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHH
Confidence 58999999999999999999999999876666554
No 248
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=42.68 E-value=29 Score=24.98 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=25.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.-.....+.++.+|++|.++.++|+....-+
T Consensus 64 g~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l 94 (131)
T PF01380_consen 64 GETRELIELLRFAKERGAPVILITSNSESPL 94 (131)
T ss_dssp STTHHHHHHHHHHHHTTSEEEEEESSTTSHH
T ss_pred ccchhhhhhhHHHHhcCCeEEEEeCCCCCch
Confidence 3567788999999999999999998755443
No 249
>COG1334 FlaG Uncharacterized flagellar protein FlaG [Cell motility and secretion]
Probab=42.54 E-value=6.5 Score=29.91 Aligned_cols=24 Identities=25% Similarity=0.317 Sum_probs=20.4
Q ss_pred CCChHHHHhhhcCCceEEEECCCccccc
Q 029711 70 TLPSKEVLQLWRTADAVCFDVDSTVCVD 97 (189)
Q Consensus 70 ~~~~~~~~~~~~~~kavIFDmDGTLiDs 97 (189)
.+|++++++++..++ |+.|.|+|.
T Consensus 95 qIPpee~L~l~~r~~----d~~gil~dk 118 (120)
T COG1334 95 QIPPEEALELAARMR----DVIGILFDK 118 (120)
T ss_pred hCChHHHHHHHHHHH----Hhhhheeec
Confidence 789999999988876 888888774
No 250
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=41.11 E-value=25 Score=28.95 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=24.2
Q ss_pred CCCCccH-HHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGI-DELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~-~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
+.+.++. .++++.+++.|+++++.|||..
T Consensus 81 Pll~~~~~~~l~~~~k~~g~~i~l~TNG~~ 110 (246)
T PRK11145 81 AILQAEFVRDWFRACKKEGIHTCLDTNGFV 110 (246)
T ss_pred HhcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 3466774 5999999999999999999973
No 251
>PF09828 Chrome_Resist: Chromate resistance exported protein; InterPro: IPR018634 Members of this family of bacterial proteins are involved in the reduction of chromate accumulation and are essential for chromate resistance [, ].
Probab=40.92 E-value=32 Score=26.68 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=33.4
Q ss_pred CCChHHHHhhhcCCceEEEECCCcccccc----hHHHHHHHcCCCcc
Q 029711 70 TLPSKEVLQLWRTADAVCFDVDSTVCVDE----GIDELAEFCGAGKA 112 (189)
Q Consensus 70 ~~~~~~~~~~~~~~kavIFDmDGTLiDse----~~~~la~~~G~~~~ 112 (189)
.+|+.++++......++=|||+|+=+... +++.+.+.+|+..+
T Consensus 30 fv~~~~v~~~~~~~~A~pFD~~ga~~tH~g~~cTFe~ll~~f~L~dp 76 (135)
T PF09828_consen 30 FVPPPEVLDVACPFDAIPFDIPGAEFTHRGDRCTFEVLLASFGLDDP 76 (135)
T ss_pred EeCchhhccccccCCCCcccCCCCeeeeeCCcccHHHHHHHhCCCCH
Confidence 45666778888889999999999877643 37888888998643
No 252
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=40.58 E-value=29 Score=26.96 Aligned_cols=26 Identities=19% Similarity=0.162 Sum_probs=22.9
Q ss_pred CccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 157 SPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.+.+.++++.+|+.|+++.|-||+..
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 46789999999999999999999754
No 253
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=40.55 E-value=29 Score=24.44 Aligned_cols=19 Identities=21% Similarity=0.151 Sum_probs=15.2
Q ss_pred CceEEEECCCcccccchHH
Q 029711 83 ADAVCFDVDSTVCVDEGID 101 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~~ 101 (189)
.-.++.+-|||.+|+|.+.
T Consensus 40 ~~~lvL~eDGT~Vd~EeyF 58 (78)
T cd06539 40 LVTLVLEEDGTVVDTEEFF 58 (78)
T ss_pred CcEEEEeCCCCEEccHHHH
Confidence 4578899999999987643
No 254
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=40.34 E-value=32 Score=26.87 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=25.3
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
.-.+.+.+.++.+|++|.++..+|+....-
T Consensus 112 G~t~~~i~~~~~ak~~Ga~vI~IT~~~~s~ 141 (177)
T cd05006 112 GNSPNVLKALEAAKERGMKTIALTGRDGGK 141 (177)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCCCc
Confidence 456889999999999999999999875443
No 255
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=40.29 E-value=30 Score=33.01 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=27.9
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
.+.||++|-+.+||+.|++.+.+|+-..-.+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa 478 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAA 478 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHH
Confidence 48899999999999999999999998765443
No 256
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=40.20 E-value=26 Score=29.68 Aligned_cols=28 Identities=21% Similarity=0.377 Sum_probs=24.3
Q ss_pred CCCCccH-HHHHHHHHHCCCeEEEEcCCc
Q 029711 154 PRLSPGI-DELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~-~elL~~Lk~~Gi~laIVSs~~ 181 (189)
+.+.|.. .++++++++.|+.+.|.|||.
T Consensus 136 Pll~~~~l~~l~~~~k~~g~~~~i~TnG~ 164 (295)
T TIGR02494 136 PLLQPEFALALLQACHERGIHTAVETSGF 164 (295)
T ss_pred hhchHHHHHHHHHHHHHcCCcEeeeCCCC
Confidence 4567775 699999999999999999996
No 257
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=39.17 E-value=33 Score=34.43 Aligned_cols=35 Identities=11% Similarity=0.237 Sum_probs=31.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVC 188 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i 188 (189)
-+++|++.+.++.|++.|+++.++||-...-+..+
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 57999999999999999999999999887776655
No 258
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=37.97 E-value=38 Score=27.08 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=24.1
Q ss_pred CCCCccHHHHHHHHHHCCC--eEEEEcCCc
Q 029711 154 PRLSPGIDELVKKLKANNK--NVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi--~laIVSs~~ 181 (189)
..+.|.+.+.++.|++.+. +++|+||+.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 4688999999999999876 499999983
No 259
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=37.45 E-value=33 Score=23.92 Aligned_cols=18 Identities=22% Similarity=0.320 Sum_probs=14.6
Q ss_pred CceEEEECCCcccccchH
Q 029711 83 ADAVCFDVDSTVCVDEGI 100 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~ 100 (189)
.-.++.+-|||.+|+|.+
T Consensus 38 ~~~l~L~eDGT~VddEey 55 (74)
T smart00266 38 PVTLVLEEDGTIVDDEEY 55 (74)
T ss_pred CcEEEEecCCcEEccHHH
Confidence 347889999999998754
No 260
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=37.27 E-value=24 Score=25.00 Aligned_cols=18 Identities=17% Similarity=0.126 Sum_probs=14.9
Q ss_pred ceEEEECCCcccccchHH
Q 029711 84 DAVCFDVDSTVCVDEGID 101 (189)
Q Consensus 84 kavIFDmDGTLiDse~~~ 101 (189)
-.++.+-|||.+|+|.+.
T Consensus 40 ~~lvLeeDGT~Vd~EeyF 57 (81)
T cd06537 40 LTLVLEEDGTAVDSEDFF 57 (81)
T ss_pred eEEEEecCCCEEccHHHH
Confidence 578899999999987643
No 261
>PRK14129 heat shock protein HspQ; Provisional
Probab=37.06 E-value=31 Score=25.62 Aligned_cols=25 Identities=32% Similarity=0.319 Sum_probs=19.2
Q ss_pred cCCceEEEECCCcccccchH-HHHHH
Q 029711 81 RTADAVCFDVDSTVCVDEGI-DELAE 105 (189)
Q Consensus 81 ~~~kavIFDmDGTLiDse~~-~~la~ 105 (189)
-++++||||+|-+.-.++.| ..+++
T Consensus 17 ~~yrGVV~DVDP~fs~~e~w~~~ia~ 42 (105)
T PRK14129 17 LGYLGVVVDIDPEYSLEEPSPDELAV 42 (105)
T ss_pred cCCCeEEEeeCCCcCCCchhHHhhcc
Confidence 46889999999999877765 44544
No 262
>PRK13937 phosphoheptose isomerase; Provisional
Probab=37.00 E-value=39 Score=26.93 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=25.7
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
--.+.+.+.++.+|++|.++..+|+.....+
T Consensus 117 G~t~~~~~~~~~ak~~g~~~I~iT~~~~s~L 147 (188)
T PRK13937 117 GNSPNVLAALEKARELGMKTIGLTGRDGGKM 147 (188)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEeCCCCChh
Confidence 3568899999999999999999999765443
No 263
>TIGR00441 gmhA phosphoheptose isomerase. Involved in lipopolysaccharide biosynthesis it may have a role in virulence in Haemophilus ducreyi.
Probab=37.00 E-value=38 Score=26.03 Aligned_cols=30 Identities=10% Similarity=0.068 Sum_probs=25.0
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
-.+.+.+.++.+|++|.++..+|+.....+
T Consensus 91 ~t~~~~~~~~~a~~~g~~ii~iT~~~~s~l 120 (154)
T TIGR00441 91 NSKNVLKAIEAAKDKGMKTITLAGKDGGKM 120 (154)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCCch
Confidence 467889999999999999999998765433
No 264
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=36.70 E-value=18 Score=27.77 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=16.1
Q ss_pred HHhhhcCCceEEEECCCcc
Q 029711 76 VLQLWRTADAVCFDVDSTV 94 (189)
Q Consensus 76 ~~~~~~~~kavIFDmDGTL 94 (189)
++-.|+....+.|||.+||
T Consensus 38 ~~~~~~~P~iV~FDmK~Tl 56 (128)
T PRK13717 38 GIVRLNAPVTAAFNMKQTV 56 (128)
T ss_pred HHhhcCCCeEEEEehHHHH
Confidence 5556778889999999999
No 265
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=36.16 E-value=37 Score=30.89 Aligned_cols=28 Identities=25% Similarity=0.245 Sum_probs=24.9
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEE-cCCc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLI-SGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIV-Ss~~ 181 (189)
+..+|.+.++|+.+++.|++++|. ||+.
T Consensus 85 pl~~~~l~eLl~~lk~~gi~taI~~TnG~ 113 (404)
T TIGR03278 85 VSCYPELEELTKGLSDLGLPIHLGYTSGK 113 (404)
T ss_pred cccCHHHHHHHHHHHhCCCCEEEeCCCCc
Confidence 567899999999999999999996 9964
No 266
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=36.14 E-value=27 Score=33.94 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=17.9
Q ss_pred CceEEEECCCcccccchHHHHHH
Q 029711 83 ADAVCFDVDSTVCVDEGIDELAE 105 (189)
Q Consensus 83 ~kavIFDmDGTLiDse~~~~la~ 105 (189)
-+.||=|+||||+.++.+-.+.-
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp 552 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLP 552 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhh
Confidence 35888999999999987654443
No 267
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=35.91 E-value=48 Score=20.25 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=21.8
Q ss_pred ceEEEECCCccc-ccchHHHHHHHcCCC
Q 029711 84 DAVCFDVDSTVC-VDEGIDELAEFCGAG 110 (189)
Q Consensus 84 kavIFDmDGTLi-Dse~~~~la~~~G~~ 110 (189)
...++|.||+++ ..++..+.++.+|..
T Consensus 3 ~V~~~d~~~~~i~~f~S~~eAa~~lg~~ 30 (53)
T smart00497 3 PVYVYDLDGNLIGEFSSIREAAKYLGIS 30 (53)
T ss_pred cEEEEeCCCCEEEEecCHHHHHHHhCCC
Confidence 467899999998 456788888888885
No 268
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=35.01 E-value=28 Score=27.26 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=27.6
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
.-++++.+.+.|+.|++. ++++|+|+-..-.+.
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~ 60 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLV 60 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHH
Confidence 357999999999999999 999999987654443
No 269
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=34.78 E-value=49 Score=27.24 Aligned_cols=28 Identities=29% Similarity=0.292 Sum_probs=24.6
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.+.|++.++++.++++|+++.+=||+.-
T Consensus 83 ~~~~~l~~Ll~~l~~~g~~~~lETngti 110 (212)
T COG0602 83 LLQPNLLELLELLKRLGFRIALETNGTI 110 (212)
T ss_pred CCcccHHHHHHHHHhCCceEEecCCCCc
Confidence 4456999999999999999999998853
No 270
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=34.66 E-value=49 Score=28.09 Aligned_cols=28 Identities=21% Similarity=0.484 Sum_probs=24.2
Q ss_pred CCCCccHHHHHHHHHHCCC-eEEEEcCCc
Q 029711 154 PRLSPGIDELVKKLKANNK-NVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi-~laIVSs~~ 181 (189)
+.+.+++.++++.+++.|+ .+.|.||+.
T Consensus 67 Pll~~~l~~iv~~l~~~g~~~v~i~TNG~ 95 (302)
T TIGR02668 67 PLLRKDLIEIIRRIKDYGIKDVSMTTNGI 95 (302)
T ss_pred cccccCHHHHHHHHHhCCCceEEEEcCch
Confidence 5677889999999999888 899999985
No 271
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=34.63 E-value=46 Score=27.98 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=22.9
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCC
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGG 180 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~ 180 (189)
.-+|+..++++.|+++|+++++....
T Consensus 63 ~~Fpdp~~~i~~l~~~g~~~~~~~~P 88 (265)
T cd06589 63 GKFPNPKSMIDELHDNGVKLVLWIDP 88 (265)
T ss_pred hhCCCHHHHHHHHHHCCCEEEEEeCh
Confidence 46899999999999999999987654
No 272
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=33.85 E-value=46 Score=26.03 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=24.9
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHM 184 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~ 184 (189)
.-.+.+.++++.++++|.++..+|+....-
T Consensus 86 G~t~~~i~~~~~ak~~g~~iI~IT~~~~s~ 115 (179)
T cd05005 86 GETSSVVNAAEKAKKAGAKVVLITSNPDSP 115 (179)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 356788899999999999999999976443
No 273
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=33.46 E-value=25 Score=32.50 Aligned_cols=18 Identities=28% Similarity=0.431 Sum_probs=12.9
Q ss_pred hcCCceEEEECCCccccc
Q 029711 80 WRTADAVCFDVDSTVCVD 97 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDs 97 (189)
+.+++++-||||-||+.-
T Consensus 9 l~~i~~iGFDmDyTLa~Y 26 (448)
T PF05761_consen 9 LKDIDVIGFDMDYTLARY 26 (448)
T ss_dssp CCC--EEEE-TBTTTBEE
T ss_pred cccCCEEEECcccchhhc
Confidence 377899999999999873
No 274
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=33.41 E-value=46 Score=27.01 Aligned_cols=28 Identities=36% Similarity=0.498 Sum_probs=23.8
Q ss_pred CCCCccH-HHHHHHHHHCCCeEEEEcCCc
Q 029711 154 PRLSPGI-DELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~-~elL~~Lk~~Gi~laIVSs~~ 181 (189)
+.+.|+. .++++.+++.|+++.+.|||.
T Consensus 76 Pll~~~~~~~li~~~~~~g~~~~i~TNG~ 104 (235)
T TIGR02493 76 PLLQPEFLSELFKACKELGIHTCLDTSGF 104 (235)
T ss_pred cccCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 4567774 599999999999999999994
No 275
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=33.32 E-value=30 Score=24.31 Aligned_cols=17 Identities=24% Similarity=0.235 Sum_probs=14.1
Q ss_pred ceEEEECCCcccccchH
Q 029711 84 DAVCFDVDSTVCVDEGI 100 (189)
Q Consensus 84 kavIFDmDGTLiDse~~ 100 (189)
-.++.+-|||.+|+|.+
T Consensus 41 ~~lvL~eDGTeVddEeY 57 (78)
T cd01615 41 VTLVLEEDGTEVDDEEY 57 (78)
T ss_pred eEEEEeCCCcEEccHHH
Confidence 46889999999988753
No 276
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=32.78 E-value=16 Score=25.35 Aligned_cols=9 Identities=33% Similarity=0.575 Sum_probs=8.3
Q ss_pred EEECCCccc
Q 029711 87 CFDVDSTVC 95 (189)
Q Consensus 87 IFDmDGTLi 95 (189)
=|||+|.++
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 277
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=32.50 E-value=31 Score=24.36 Aligned_cols=17 Identities=24% Similarity=0.294 Sum_probs=14.1
Q ss_pred ceEEEECCCcccccchH
Q 029711 84 DAVCFDVDSTVCVDEGI 100 (189)
Q Consensus 84 kavIFDmDGTLiDse~~ 100 (189)
-.++.+-|||.+|+|.+
T Consensus 43 ~~lvL~eDGT~VddEey 59 (80)
T cd06536 43 ITLVLAEDGTIVEDEDY 59 (80)
T ss_pred eEEEEecCCcEEccHHH
Confidence 46789999999998764
No 278
>PRK10671 copA copper exporting ATPase; Provisional
Probab=31.10 E-value=37 Score=33.57 Aligned_cols=24 Identities=29% Similarity=0.356 Sum_probs=21.1
Q ss_pred HHHhhhcCCceEEEECCCcccccc
Q 029711 75 EVLQLWRTADAVCFDVDSTVCVDE 98 (189)
Q Consensus 75 ~~~~~~~~~kavIFDmDGTLiDse 98 (189)
+.++...+.+.++||-+|||+..+
T Consensus 509 ~~le~l~~v~~v~fDKTGTLT~g~ 532 (834)
T PRK10671 509 DALQRASTLDTLVFDKTGTLTEGK 532 (834)
T ss_pred HHHHhhcCCCEEEEcCCCccccCc
Confidence 568888999999999999998764
No 279
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=30.64 E-value=58 Score=27.90 Aligned_cols=25 Identities=24% Similarity=0.316 Sum_probs=22.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcC
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
..+|+..++++.|+++|+++++...
T Consensus 71 ~~FPdp~~mi~~Lh~~G~k~v~~v~ 95 (292)
T cd06595 71 KLFPDPEKLLQDLHDRGLKVTLNLH 95 (292)
T ss_pred hcCCCHHHHHHHHHHCCCEEEEEeC
Confidence 5689999999999999999988664
No 280
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=30.63 E-value=38 Score=32.76 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=31.0
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhhhhcC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMINVCC 189 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~~i~ 189 (189)
++++|++.++|+++. +=+.+.|.|=|.+.++..++
T Consensus 200 vKlRP~~~efL~~~s-klfemhVyTmg~R~YA~~i~ 234 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEAN-KLFEMHVYTMGTRDYALEIA 234 (635)
T ss_pred EEeCccHHHHHHHHH-hhceeEEEeccchHHHHHHH
Confidence 689999999999998 55999999999999987653
No 281
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=30.41 E-value=54 Score=29.60 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=19.7
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCc
Q 029711 159 GIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
...+.+..|+++|+++.|||||.
T Consensus 32 ~l~~~ia~L~~~G~eVilVSSGA 54 (369)
T COG0263 32 ELVRQVAALHKAGHEVVLVSSGA 54 (369)
T ss_pred HHHHHHHHHHhCCCEEEEEccch
Confidence 34677889999999999999985
No 282
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=29.58 E-value=61 Score=26.03 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=25.2
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
-.+.+.+.++.+|++|.++..+|+.....+
T Consensus 123 ~t~~~i~~~~~ak~~g~~iI~iT~~~~s~l 152 (192)
T PRK00414 123 NSGNIIKAIEAARAKGMKVITLTGKDGGKM 152 (192)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCChh
Confidence 468899999999999999999998754433
No 283
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=29.20 E-value=36 Score=29.30 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=16.3
Q ss_pred hcCCceEEEECCCcccccc
Q 029711 80 WRTADAVCFDVDSTVCVDE 98 (189)
Q Consensus 80 ~~~~kavIFDmDGTLiDse 98 (189)
..+.|.++.|+|+||+.+.
T Consensus 86 ~~~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHSS 104 (262)
T ss_pred cCCCceEEEeCCCcccccc
Confidence 4667899999999998875
No 284
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=29.19 E-value=60 Score=27.94 Aligned_cols=25 Identities=32% Similarity=0.385 Sum_probs=21.1
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 159 GIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
-+.|.+..|+..|+++.|||+|.-.
T Consensus 36 ~IVEqV~~L~~~G~evilVSSGaVA 60 (285)
T KOG1154|consen 36 SIVEQVSELQRMGREVILVSSGAVA 60 (285)
T ss_pred HHHHHHHHHHhcCceEEEEecchhh
Confidence 3578888999999999999998543
No 285
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=27.89 E-value=27 Score=30.06 Aligned_cols=15 Identities=33% Similarity=0.576 Sum_probs=13.1
Q ss_pred eEEEECCCcccccch
Q 029711 85 AVCFDVDSTVCVDEG 99 (189)
Q Consensus 85 avIFDmDGTLiDse~ 99 (189)
=|.||.|++|++.++
T Consensus 123 RIAFDgDaVLfsDes 137 (264)
T PF06189_consen 123 RIAFDGDAVLFSDES 137 (264)
T ss_pred EEEEcCCeEeecCcc
Confidence 478999999999775
No 286
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=27.49 E-value=72 Score=21.10 Aligned_cols=24 Identities=13% Similarity=-0.013 Sum_probs=20.9
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEc
Q 029711 155 RLSPGIDELVKKLKANNKNVYLIS 178 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVS 178 (189)
.-.+.+.++++.+|++|.++..+|
T Consensus 58 g~t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 58 GRTEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEEe
Confidence 346789999999999999999888
No 287
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=27.14 E-value=69 Score=27.05 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=25.8
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
-.+.+.++++.++++|.+++.+|+.....+.
T Consensus 199 ~t~~~~~~~~~ak~~g~~ii~IT~~~~s~la 229 (292)
T PRK11337 199 RTSDVIEAVELAKKNGAKIICITNSYHSPIA 229 (292)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCChhH
Confidence 4677999999999999999999998655443
No 288
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=26.79 E-value=64 Score=26.99 Aligned_cols=31 Identities=10% Similarity=0.014 Sum_probs=25.6
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.-.+.+.+.++.+|++|.++..+|+.....+
T Consensus 186 g~~~~~~~~~~~ak~~ga~iI~IT~~~~s~l 216 (278)
T PRK11557 186 GERRELNLAADEALRVGAKVLAITGFTPNAL 216 (278)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEcCCCCCch
Confidence 3467788999999999999999999865444
No 289
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=26.68 E-value=78 Score=22.97 Aligned_cols=26 Identities=15% Similarity=0.116 Sum_probs=21.5
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
-.+.+.+.++.++++|.+++.+|+..
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~ 80 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGG 80 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 45678888999999999999999654
No 290
>PF01976 DUF116: Protein of unknown function DUF116; InterPro: IPR002829 These archaeal and bacterial proteins have no known function. Members of this family contain seven conserved cysteines and may also be an integral membrane protein.
Probab=26.09 E-value=71 Score=25.20 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=21.1
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCch
Q 029711 159 GIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.+-++++..++.|+++.|||++.-
T Consensus 74 ~Ig~l~~lae~~g~~v~i~~Ggt~ 97 (158)
T PF01976_consen 74 DIGDLKKLAEKYGYKVYIATGGTL 97 (158)
T ss_pred chhHHHHHHHHcCCEEEEEcChHH
Confidence 577888899999999999999963
No 291
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=25.97 E-value=42 Score=23.54 Aligned_cols=17 Identities=24% Similarity=0.212 Sum_probs=13.6
Q ss_pred ceEEEECCCcccccchH
Q 029711 84 DAVCFDVDSTVCVDEGI 100 (189)
Q Consensus 84 kavIFDmDGTLiDse~~ 100 (189)
-.++.+=|||.+|+|.+
T Consensus 41 ~~lvL~eDGT~VddEey 57 (78)
T PF02017_consen 41 VRLVLEEDGTEVDDEEY 57 (78)
T ss_dssp CEEEETTTTCBESSCHH
T ss_pred cEEEEeCCCcEEccHHH
Confidence 35688999999998753
No 292
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=25.94 E-value=75 Score=27.67 Aligned_cols=26 Identities=38% Similarity=0.606 Sum_probs=21.8
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
..-+|+..++++.|+++|+++.+...
T Consensus 67 ~~~FPdp~~mi~~Lh~~G~~~~~~i~ 92 (317)
T cd06594 67 PERYPGLDELIEELKARGIRVLTYIN 92 (317)
T ss_pred hhhCCCHHHHHHHHHHCCCEEEEEec
Confidence 34689999999999999999887543
No 293
>COG2044 Predicted peroxiredoxins [General function prediction only]
Probab=25.83 E-value=97 Score=23.55 Aligned_cols=29 Identities=17% Similarity=0.356 Sum_probs=25.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCch
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.+.+|...++++.++++|+++++++-+..
T Consensus 58 ~~~~~~l~~~~~~a~e~GVk~yvCe~s~~ 86 (120)
T COG2044 58 HPNFPPLEELIKQAIEAGVKIYVCEQSLK 86 (120)
T ss_pred CCCCCCHHHHHHHHHHcCCEEEEEcchhh
Confidence 35679999999999999999999987765
No 294
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=25.69 E-value=79 Score=27.44 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=21.2
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLIS 178 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVS 178 (189)
...+|+..++++.|+++|+++++..
T Consensus 62 ~~~FPdp~~mi~~L~~~G~kv~~~i 86 (319)
T cd06591 62 PERFPDPKAMVRELHEMNAELMISI 86 (319)
T ss_pred hhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 3468999999999999999987754
No 295
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=25.64 E-value=49 Score=23.34 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=14.5
Q ss_pred ceEEEECCCcccccchHH
Q 029711 84 DAVCFDVDSTVCVDEGID 101 (189)
Q Consensus 84 kavIFDmDGTLiDse~~~ 101 (189)
-.++.+-|||.+|+|.+.
T Consensus 40 ~~lvL~eDGT~Vd~EeyF 57 (79)
T cd06538 40 SSLVLDEDGTGVDTEEFF 57 (79)
T ss_pred cEEEEecCCcEEccHHHH
Confidence 468899999999887643
No 296
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=25.61 E-value=79 Score=27.43 Aligned_cols=25 Identities=12% Similarity=0.020 Sum_probs=21.3
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLIS 178 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVS 178 (189)
...+|+..++++.|+++|+++.+..
T Consensus 69 ~~~FPdp~~mi~~L~~~g~k~~~~i 93 (317)
T cd06599 69 KDRFPDPAAFVAKFHERGIRLAPNI 93 (317)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEe
Confidence 3578999999999999999998743
No 297
>PRK15482 transcriptional regulator MurR; Provisional
Probab=25.21 E-value=76 Score=26.76 Aligned_cols=32 Identities=9% Similarity=-0.033 Sum_probs=26.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
..-.+.+.++++.++++|.+++.+|+....-+
T Consensus 192 sg~t~~~~~~~~~a~~~g~~iI~IT~~~~s~l 223 (285)
T PRK15482 192 SGSKKEIVLCAEAARKQGATVIAITSLADSPL 223 (285)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCCCCch
Confidence 34678899999999999999999999865433
No 298
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.17 E-value=89 Score=21.46 Aligned_cols=26 Identities=23% Similarity=0.208 Sum_probs=21.6
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 158 PGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 158 pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
....++++.|+++|+++.+.|++...
T Consensus 53 ~~~~~i~~~L~~~G~~~~~~~~~~~~ 78 (85)
T cd04906 53 EELAELLEDLKSAGYEVVDLSDDELA 78 (85)
T ss_pred HHHHHHHHHHHHCCCCeEECCCCHHH
Confidence 34889999999999999998887543
No 299
>PRK13938 phosphoheptose isomerase; Provisional
Probab=24.74 E-value=83 Score=25.57 Aligned_cols=30 Identities=13% Similarity=0.048 Sum_probs=24.9
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
-.+.+.+.++.+|++|.+++.+|+....-+
T Consensus 125 ~t~~vi~a~~~Ak~~G~~vI~iT~~~~s~L 154 (196)
T PRK13938 125 NSMSVLRAAKTARELGVTVVAMTGESGGQL 154 (196)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence 467889999999999999999998765433
No 300
>PF13588 HSDR_N_2: Type I restriction enzyme R protein N terminus (HSDR_N); PDB: 3H1T_A.
Probab=24.61 E-value=66 Score=23.05 Aligned_cols=26 Identities=12% Similarity=0.178 Sum_probs=20.0
Q ss_pred ccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 158 PGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 158 pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
.++.++..+++..+.+.+|+|||...
T Consensus 68 ~~~~Q~~~Y~~~~~~~~~i~tNG~~~ 93 (112)
T PF13588_consen 68 KAVEQLKSYARALGAPYGILTNGKEF 93 (112)
T ss_dssp -SHHHHHHHHHHHT-SEEEEE-SS-E
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCeE
Confidence 48899999999999999999999654
No 301
>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional
Probab=24.57 E-value=79 Score=26.99 Aligned_cols=32 Identities=9% Similarity=0.188 Sum_probs=26.0
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
--.+.+.+.++.+|++|.++..+|+....-+.
T Consensus 100 G~t~~~~~~~~~ak~~g~~vI~iT~~~~s~la 131 (321)
T PRK11543 100 GGAKELDLIIPRLEDKSIALLAMTGKPTSPLG 131 (321)
T ss_pred CCcHHHHHHHHHHHHcCCeEEEEECCCCChhH
Confidence 34677899999999999999999997655443
No 302
>COG2810 Predicted type IV restriction endonuclease [Defense mechanisms]
Probab=24.31 E-value=78 Score=27.18 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=22.7
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCc
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.--...++++++-..|..++|||||.
T Consensus 82 ~akd~qq~~~Yav~~Gv~~~iVtnGr 107 (284)
T COG2810 82 PAKDVQQLAKYAVDKGVEVGIVTNGR 107 (284)
T ss_pred chHHHHHHHHHHHhcCcEEEEEeCCe
Confidence 34467899999999999999999995
No 303
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=24.19 E-value=90 Score=27.06 Aligned_cols=26 Identities=12% Similarity=0.221 Sum_probs=21.5
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
...+|...++++.|+++|+++++...
T Consensus 66 ~~~FPdp~~mi~~L~~~G~k~~~~v~ 91 (317)
T cd06598 66 RKAFPDPAGMIADLAKKGVKTIVITE 91 (317)
T ss_pred cccCCCHHHHHHHHHHcCCcEEEEEc
Confidence 35788999999999999998887654
No 304
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=23.73 E-value=1e+02 Score=21.24 Aligned_cols=13 Identities=31% Similarity=0.360 Sum_probs=5.5
Q ss_pred HHHHHHHHCCCeE
Q 029711 162 ELVKKLKANNKNV 174 (189)
Q Consensus 162 elL~~Lk~~Gi~l 174 (189)
++++.|.+.|+++
T Consensus 4 ~~~~~l~~lG~~i 16 (90)
T smart00851 4 ELAKRLAELGFEL 16 (90)
T ss_pred HHHHHHHHCCCEE
Confidence 3344444444444
No 305
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=22.94 E-value=95 Score=26.71 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=21.5
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcC
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
.-+|+..++++.|+++|+++++..+
T Consensus 67 ~~FPdp~~mi~~l~~~G~k~~l~i~ 91 (303)
T cd06592 67 TKFPDPKGMIDQLHDLGFRVTLWVH 91 (303)
T ss_pred hhCCCHHHHHHHHHHCCCeEEEEEC
Confidence 4689999999999999999888544
No 306
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=22.87 E-value=96 Score=26.54 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=22.4
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
...+|+.+++++.|+++|+++++..+
T Consensus 62 ~~~FPd~~~~i~~l~~~G~~~~~~~~ 87 (308)
T cd06593 62 PDRFPDPEGMLSRLKEKGFKVCLWIN 87 (308)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEec
Confidence 35789999999999999999988654
No 307
>PRK13936 phosphoheptose isomerase; Provisional
Probab=22.75 E-value=89 Score=25.12 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=23.9
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRH 183 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~ 183 (189)
-.+.+.++++.+|++|.++..+|+....
T Consensus 123 ~t~~~~~~~~~ak~~g~~iI~IT~~~~s 150 (197)
T PRK13936 123 NSANVIQAIQAAHEREMHVVALTGRDGG 150 (197)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 4677899999999999999999996543
No 308
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=22.58 E-value=97 Score=27.26 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=19.3
Q ss_pred CCccHHHHHHHHHHCCCeEEEE
Q 029711 156 LSPGIDELVKKLKANNKNVYLI 177 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIV 177 (189)
-+|+..++++.|+++|+++.+.
T Consensus 83 ~FPdp~~mi~~Lh~~G~kv~l~ 104 (340)
T cd06597 83 RWPNPKGMIDELHEQGVKVLLW 104 (340)
T ss_pred cCCCHHHHHHHHHHCCCEEEEE
Confidence 5789999999999999999764
No 309
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=22.46 E-value=1.1e+02 Score=26.65 Aligned_cols=28 Identities=29% Similarity=0.419 Sum_probs=22.9
Q ss_pred CCCCccHHHHHHHHHHCCC--eEEEEcCCc
Q 029711 154 PRLSPGIDELVKKLKANNK--NVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi--~laIVSs~~ 181 (189)
+.+.+++.++++.+++.+. .+.|.||+.
T Consensus 72 Pllr~dl~~li~~i~~~~~l~~i~itTNG~ 101 (329)
T PRK13361 72 PLVRRGCDQLVARLGKLPGLEELSLTTNGS 101 (329)
T ss_pred CCccccHHHHHHHHHhCCCCceEEEEeChh
Confidence 5677889999999988764 788999985
No 310
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=22.09 E-value=88 Score=26.91 Aligned_cols=24 Identities=29% Similarity=0.466 Sum_probs=18.9
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCch
Q 029711 159 GIDELVKKLKANNKNVYLISGGFR 182 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~~~ 182 (189)
.+.+-|..|+++|+++.|||+|.-
T Consensus 35 ~l~~~i~~l~~~g~~vilVssGAv 58 (284)
T cd04256 35 SIVEQVSELQSQGREVILVTSGAV 58 (284)
T ss_pred HHHHHHHHHHHCCCEEEEEeeCcH
Confidence 345667788899999998888853
No 311
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=22.06 E-value=95 Score=24.98 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=19.2
Q ss_pred HHHHHHCCCeEEEEcCCchhhhh
Q 029711 164 VKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 164 L~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
|+.|.+.|++++|+|+.....++
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive 66 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVE 66 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHH
Confidence 56778899999999998877664
No 312
>PRK11382 frlB fructoselysine-6-P-deglycase; Provisional
Probab=21.91 E-value=94 Score=27.19 Aligned_cols=31 Identities=6% Similarity=-0.099 Sum_probs=25.4
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMIN 186 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i~ 186 (189)
-.+.+.+.++.+|++|.++..+||....-+.
T Consensus 104 eT~e~i~al~~ak~~Ga~~I~IT~~~~S~L~ 134 (340)
T PRK11382 104 KTEEVIKALELGRACGALTAAFTKRADSPIT 134 (340)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEECCCCChHH
Confidence 3567899999999999999999998765443
No 313
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.66 E-value=55 Score=30.91 Aligned_cols=15 Identities=27% Similarity=0.576 Sum_probs=0.0
Q ss_pred cCCceEEEECCCccc
Q 029711 81 RTADAVCFDVDSTVC 95 (189)
Q Consensus 81 ~~~kavIFDmDGTLi 95 (189)
+..|+++.|+|+||+
T Consensus 220 ~~kK~LVLDLDNTLW 234 (574)
T COG3882 220 KSKKALVLDLDNTLW 234 (574)
T ss_pred cccceEEEecCCccc
No 314
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=21.59 E-value=76 Score=23.87 Aligned_cols=24 Identities=25% Similarity=0.361 Sum_probs=20.1
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcC
Q 029711 156 LSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
-.|.+.+.+++.|++|.+++.+||
T Consensus 115 ~s~~vi~a~~~Ak~~G~~vIalTg 138 (138)
T PF13580_consen 115 NSPNVIEAAEEAKERGMKVIALTG 138 (138)
T ss_dssp -SHHHHHHHHHHHHTT-EEEEEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 468899999999999999998885
No 315
>TIGR02666 moaA molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine.
Probab=21.52 E-value=1.2e+02 Score=26.22 Aligned_cols=28 Identities=32% Similarity=0.504 Sum_probs=21.9
Q ss_pred CCCCccHHHHHHHHHH-CCC-eEEEEcCCc
Q 029711 154 PRLSPGIDELVKKLKA-NNK-NVYLISGGF 181 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~-~Gi-~laIVSs~~ 181 (189)
+.+.|++.++++.+++ .|+ .+.|.||+.
T Consensus 70 Pll~~~l~~li~~i~~~~gi~~v~itTNG~ 99 (334)
T TIGR02666 70 PLLRKDLVELVARLAALPGIEDIALTTNGL 99 (334)
T ss_pred ccccCCHHHHHHHHHhcCCCCeEEEEeCch
Confidence 4567888888888877 577 788888885
No 316
>PRK10892 D-arabinose 5-phosphate isomerase; Provisional
Probab=21.36 E-value=89 Score=26.82 Aligned_cols=31 Identities=23% Similarity=0.144 Sum_probs=25.8
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
--.+.+.+.++.+|++|.+++.+|+.+..-+
T Consensus 105 G~t~~~~~~~~~ak~~g~~vi~iT~~~~s~l 135 (326)
T PRK10892 105 GESSEILALIPVLKRLHVPLICITGRPESSM 135 (326)
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEECCCCCcc
Confidence 3567889999999999999999999875443
No 317
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=21.20 E-value=1.9e+02 Score=30.22 Aligned_cols=33 Identities=18% Similarity=0.421 Sum_probs=28.2
Q ss_pred CCCCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 153 PPRLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 153 ~~~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
.-++-+|+.|.|+.|++.|+++-+.||=-.+.+
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETA 681 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTGDKQETA 681 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcCcHHHHH
Confidence 357999999999999999999999998655443
No 318
>PF13394 Fer4_14: 4Fe-4S single cluster domain; PDB: 1TV8_B 1TV7_A 2FB2_A 2FB3_A.
Probab=21.11 E-value=32 Score=24.67 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=19.1
Q ss_pred ccHHHHHHHHHHCC--CeEEEEcCCchh
Q 029711 158 PGIDELVKKLKANN--KNVYLISGGFRH 183 (189)
Q Consensus 158 pG~~elL~~Lk~~G--i~laIVSs~~~~ 183 (189)
+.+.++++.+++.+ ..+.|.||+...
T Consensus 65 ~~l~~~i~~~~~~~~~~~i~i~TNg~~~ 92 (119)
T PF13394_consen 65 EDLIELIEYLKERGPEIKIRIETNGTLP 92 (119)
T ss_dssp HHHHHHHCTSTT-----EEEEEE-STTH
T ss_pred HHHHHHHHHHHhhCCCceEEEEeCCeec
Confidence 56889999999999 999999999755
No 319
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=21.07 E-value=1.1e+02 Score=26.80 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=22.3
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEcC
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLISG 179 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVSs 179 (189)
...+|+..++++.|+++|+++.+...
T Consensus 60 ~~~FPdp~~mi~~L~~~G~k~~~~~~ 85 (339)
T cd06603 60 KKKFPDPEKMQEKLASKGRKLVTIVD 85 (339)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEec
Confidence 45789999999999999999887654
No 320
>TIGR00393 kpsF KpsF/GutQ family protein. This model describes a number of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. One is GutQ, a protein of the glucitol operon. Another is KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of E. coli.
Probab=21.00 E-value=96 Score=25.58 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=25.3
Q ss_pred CCCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 155 RLSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 155 ~l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
--.+.+.+.++.+|++|.+++.+|+.....+
T Consensus 58 G~t~~~~~~~~~a~~~g~~ii~iT~~~~s~l 88 (268)
T TIGR00393 58 GESLELLNLIPHLKRLSHKIIAFTGSPNSSL 88 (268)
T ss_pred CCCHHHHHHHHHHHHcCCcEEEEECCCCCcc
Confidence 3567889999999999999999999764433
No 321
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=20.46 E-value=1.1e+02 Score=24.88 Aligned_cols=30 Identities=13% Similarity=0.053 Sum_probs=24.9
Q ss_pred CCccHHHHHHHHHHCCCeEEEEcCCchhhh
Q 029711 156 LSPGIDELVKKLKANNKNVYLISGGFRHMI 185 (189)
Q Consensus 156 l~pG~~elL~~Lk~~Gi~laIVSs~~~~~i 185 (189)
-.+.+.+.++.+|++|.++..+|+.....+
T Consensus 121 ~s~~v~~a~~~Ak~~G~~vI~IT~~~~s~l 150 (196)
T PRK10886 121 NSRDIVKAVEAAVTRDMTIVALTGYDGGEL 150 (196)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence 367789999999999999999999765443
No 322
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=20.15 E-value=1.1e+02 Score=26.45 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=21.3
Q ss_pred CCCCccHHHHHHHHHHCCCeEEEEc
Q 029711 154 PRLSPGIDELVKKLKANNKNVYLIS 178 (189)
Q Consensus 154 ~~l~pG~~elL~~Lk~~Gi~laIVS 178 (189)
...+|+.+++++.|+++|+++.+..
T Consensus 60 ~~~FPdp~~~i~~l~~~g~k~~~~~ 84 (317)
T cd06600 60 PYRFPEPKKLIDELHKRNVKLVTIV 84 (317)
T ss_pred hhcCCCHHHHHHHHHHCCCEEEEEe
Confidence 3468999999999999999987664
No 323
>PF13353 Fer4_12: 4Fe-4S single cluster domain; PDB: 3C8F_A 3CB8_A 3T7V_A 2YX0_A 3CAN_A.
Probab=20.07 E-value=1.1e+02 Score=22.29 Aligned_cols=27 Identities=15% Similarity=0.348 Sum_probs=21.6
Q ss_pred CccHHHHHHHHHHCCC-eEEEEcCCchh
Q 029711 157 SPGIDELVKKLKANNK-NVYLISGGFRH 183 (189)
Q Consensus 157 ~pG~~elL~~Lk~~Gi-~laIVSs~~~~ 183 (189)
.|.+.++++.+++++. +..+.||+...
T Consensus 69 ~~~l~~i~~~~k~~~~~~~~~~tng~~~ 96 (139)
T PF13353_consen 69 YDELLEILKYIKEKFPKKIIILTNGYTL 96 (139)
T ss_dssp HHHHHHHHHHHHHTT-SEEEEEETT--H
T ss_pred HhHHHHHHHHHHHhCCCCeEEEECCCch
Confidence 5889999999999998 89999998643
No 324
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=20.03 E-value=1.1e+02 Score=27.41 Aligned_cols=23 Identities=30% Similarity=0.458 Sum_probs=19.3
Q ss_pred cHHHHHHHHHHCCCeEEEEcCCc
Q 029711 159 GIDELVKKLKANNKNVYLISGGF 181 (189)
Q Consensus 159 G~~elL~~Lk~~Gi~laIVSs~~ 181 (189)
.+.+.|..|+++|++++||||+.
T Consensus 31 ~la~~I~~l~~~G~~vvlVsSGa 53 (368)
T PRK13402 31 GLVQQIVYLKDQGHQVVLVSSGA 53 (368)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCh
Confidence 35667788999999999999985
Done!