BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029713
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLI1|BH036_ARATH Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2
SV=1
Length = 174
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLMG 75
ER RR +M +LY++L S++P S DQ++EA YIK LQ ++ + R++ LM
Sbjct: 10 ERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSVRRDDLMV 69
Query: 76 IEKPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGSALEVVLTT-GLDFQFMFIETIRLL 134
+ + +++ + +G + + + +E++L++ Q F +++L
Sbjct: 70 LSRGSLLGSSNGDFKEDVEMISG--KNHVVVRQCLVGVEIMLSSRCCGGQPRFSSVLQVL 127
Query: 135 HEEGVEIVNASFNVVEDTIFHTIHSK 160
E G+ ++N+ ++V+D + +TI ++
Sbjct: 128 SEYGLCLLNSISSIVDDRLVYTIQAE 153
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLMG 75
ER RR ++ + L S+VP+ M+ SL L +A YIK LQ ++ M+
Sbjct: 400 ERQRREKLNQRFYALRSVVPNISKMDKASL---LGDAISYIKELQEKVKIME-------- 448
Query: 76 IEKPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGSALEVVLTTGLDFQFMFIETIRLLH 135
D T S + S TIT SP+++I M + V + + LD I+ +
Sbjct: 449 ----DERVGTDKSLSESNTITVE-ESPEVDIQAMNEEVVVRVISPLD-SHPASRIIQAMR 502
Query: 136 EEGVEIVNASFNVVEDTIFHTIHSKQIGDSGSD 168
V ++ A ++ EDT+FHT K ++GSD
Sbjct: 503 NSNVSLMEAKLSLAEDTMFHTFVIKS--NNGSD 533
>sp|Q9STJ7|BH118_ARATH Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118
PE=2 SV=1
Length = 163
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 13 KTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKER 72
K IE+ RR +M +LY++L S++P + S DQ+ A YI LQ N++ + +++
Sbjct: 7 KEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRD- 65
Query: 73 LMGIEKPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGSALEVVLTTGLDFQFMFIETIR 132
D + S SS S + I +E+VL+ Q F ++
Sbjct: 66 -------DLVLLSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSI---LQTPFSSVLQ 115
Query: 133 LLHEEGVEIVNASFNVVEDTIFHTIHSK 160
+L E G+ ++ + V D + HT+ ++
Sbjct: 116 VLREHGLYVLGYICSSVNDRLIHTLQAE 143
>sp|Q9LN95|BH055_ARATH Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2
SV=1
Length = 257
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 2 ENNPSSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQT 61
++ P + R K +ER RR + +L+ L ++P Q S D + EA YIK LQ
Sbjct: 69 DDEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQK 128
Query: 62 NLERMKERKERLM-GIEKPDAAAATSSSGNSSGTITT-GLRSPQIEIHEMGSALEVVLTT 119
++ + E+++R+ I P + S +S T + G + + + LE+V++
Sbjct: 129 KIKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSC 188
Query: 120 GLDFQFMFIETIRLL-HEEGVEIVNASFNVVEDTIFHTIHSK 160
+ ++LL E+ IV+ + HTI S+
Sbjct: 189 CNRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASE 230
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLMG 75
ER RR ++ + L S+VP+ M+ SL L +A YI L L+ M+ +ERL
Sbjct: 438 ERQRREKLNQRFYALRSVVPNISKMDKASL---LGDAVSYINELHAKLKVMEAERERLGY 494
Query: 76 IEKPDAAAATSSSGNSSG-TITTGLRSPQIEIHEMGSALEVVLTTGLDFQFMFIETIRLL 134
P + + + +SG +T + P +E H R+
Sbjct: 495 SSNPPISLDSDINVQTSGEDVTVRINCP-LESHPAS---------------------RIF 532
Query: 135 H---EEGVEIVNASFNVVEDTIFHTIHSK 160
H E VE++N++ V +DT+ HT K
Sbjct: 533 HAFEESKVEVINSNLEVSQDTVLHTFVVK 561
>sp|Q9M1K1|ORG2_ARATH Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1
Length = 253
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 1 MENNPSS-SRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRL 59
++NNP + + ER+RR ++ L+S+L S +P + S+P+ + ++ KYI L
Sbjct: 64 IDNNPVVVKKLNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPEL 123
Query: 60 QTNLERMKERKERLM 74
Q ++R+ ++KE ++
Sbjct: 124 QQQVKRLIQKKEEIL 138
>sp|Q9FLI0|BH120_ARATH Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120
PE=2 SV=2
Length = 204
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 8/149 (5%)
Query: 13 KTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKER 72
+ IER RR +M L+++L S +P + ++ D ++ A +IK QT ++ + R++
Sbjct: 32 RNIERQRRQEMAILFASLRSQLPLKYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDE 91
Query: 73 LMGIEKPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGSALEVV---LTTGLDFQFMFIE 129
L K + TS +G+ SG+ ++ + + S EVV L +GL+ +
Sbjct: 92 L----KREIGDPTSLTGSGSGSGSSRSEPASVMVQPCVSGFEVVVSSLASGLE-AWPLSR 146
Query: 130 TIRLLHEEGVEIVNASFNVVEDTIFHTIH 158
+ +LH +G+E++++ V + + +TI
Sbjct: 147 VLEVLHGQGLEVISSLTARVNERLMYTIQ 175
>sp|Q9LQ08|BH125_ARATH Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125
PE=2 SV=1
Length = 259
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 2 ENNPSSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQT 61
+++ S + + IER RR ++ +L+ L +++P Q S D + +A YIK LQ
Sbjct: 68 DDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKDLQI 127
Query: 62 NLERMKERKERLMGIEKPDAAAATSSSG 89
++ + E++ R ++K +A T+ S
Sbjct: 128 KIKELNEKRNR---VKKVISATTTTHSA 152
>sp|Q9STJ6|BH126_ARATH Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126
PE=2 SV=1
Length = 221
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 2 ENNPSSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQT 61
++N + + IER RR +M L++TL + +P + ++ D ++ A +IK +
Sbjct: 37 DDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEA 96
Query: 62 NLERMKERKERL-----MGIE-KPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGSALEV 115
++ + R++ L G + PD S G S T + P + S LEV
Sbjct: 97 RIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPA--TVMVQPHV------SGLEV 148
Query: 116 VLTTGLDF--QFMFIETIRLLHEEGVEIVNASFNVVEDTIFHTIH 158
V+++ + + + E+G+E++++ V D + HTI
Sbjct: 149 VVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRVNDRLMHTIQ 193
>sp|Q9FYE6|BH101_ARATH Transcription factor bHLH101 OS=Arabidopsis thaliana GN=BHLH101
PE=2 SV=1
Length = 240
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLM 74
ER+RR ++ ALYS+L +++P S+P + KYI + L+R+ RKE L+
Sbjct: 74 ERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQRLSRRKEELL 132
>sp|Q9M1K0|ORG3_ARATH Transcription factor ORG3 OS=Arabidopsis thaliana GN=ORG3 PE=1 SV=1
Length = 258
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 1 MENNPSS-SRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRL 59
++NNP + + ER+RR ++ +L+S+L S +P + S+P + + KYI L
Sbjct: 69 IDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPEL 128
Query: 60 Q 60
Q
Sbjct: 129 Q 129
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 12 RKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKE 71
R ER RR ++ L +VP+ + T+ D L+EA +Y+K LQ ++ + E ++
Sbjct: 195 RSIAERVRRTRISDRIRKLQELVPNMD--KQTNTADMLEEAVEYVKVLQRQIQELTEEQK 252
Query: 72 RLMGIEK 78
R I K
Sbjct: 253 RCTCIPK 259
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 12 RKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKE 71
R ER RR ++ L +VP+ + T+ D L+EA +Y+K LQ+ ++ + E+++
Sbjct: 192 RSIAERVRRTRISDRIRRLQELVPNMD--KQTNTADMLEEAVEYVKALQSQIQELTEQQK 249
Query: 72 RL 73
R
Sbjct: 250 RC 251
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 7 SSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNL--- 63
S+ D ER RR ++ + L+++VP + M+ S+ L +A K+IK LQ +
Sbjct: 148 SNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASV---LGDALKHIKYLQERVGEL 204
Query: 64 -ERMKERKERLMGIEKPDAAAATSSSGNSSGTITTG---LRSPQIEI 106
E+ KER+ M + K ++ + S + G L P+IE+
Sbjct: 205 EEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEV 251
>sp|P03966|MYCN_MOUSE N-myc proto-oncogene protein OS=Mus musculus GN=Mycn PE=2 SV=2
Length = 462
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 6 SSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLER 65
S R + +ER RRN +++ + TL VP E + L +AT+Y+ LQ N +
Sbjct: 378 SERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEHQ 437
Query: 66 MKERKERLMG 75
+ KE+L
Sbjct: 438 LLLEKEKLQA 447
>sp|Q63379|MYCN_RAT N-myc proto-oncogene protein OS=Rattus norvegicus GN=Mycn PE=3 SV=1
Length = 462
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 6 SSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLER 65
S R + +ER RRN +++ + TL VP E + L +AT+Y+ LQ N +
Sbjct: 378 SERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHALQANEHQ 437
Query: 66 MKERKERLMG 75
+ KE+L
Sbjct: 438 LLLEKEKLQA 447
>sp|Q7SX95|MAD3_DANRE Max dimerization protein 3 OS=Danio rerio GN=mxd3 PE=2 SV=1
Length = 200
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 5 PSSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLE 64
P +SR+ +E++RR Q++ L VP + + L +A +IK+LQ E
Sbjct: 55 PGNSRSVHNELEKHRRAQLRHCLEQLKQQVPLSSDSSRNTTLNLLRQAQLHIKKLQEQDE 114
Query: 65 RMKERKERL 73
R K K+RL
Sbjct: 115 RAKLLKDRL 123
>sp|P23999|MYCS_RAT Protein S-Myc OS=Rattus norvegicus GN=Mycs PE=3 SV=1
Length = 429
Score = 33.5 bits (75), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 9 RTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTN------ 62
R + +ER RR+ M++ + L +VP E + L +AT+YI LQT+
Sbjct: 348 RRNHNRMERQRRDIMRSSFLNLRDLVPELVHNEKAAKVVILKKATEYIHTLQTDESKLLV 407
Query: 63 -LERMKERKERLM 74
E++ ERK++L+
Sbjct: 408 EREKLYERKQQLL 420
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 8 SRTDR-KTI--ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLE 64
++TDR +T+ ER RR +MK L S+VP+ M+ S+ + +A Y++ LQ+
Sbjct: 125 TKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASI---VGDAVLYVQELQS--- 178
Query: 65 RMKERKERLMGIE------------KPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGSA 112
+ K+ K + G+E PDA G + ++ I++ E G
Sbjct: 179 QAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFY 238
Query: 113 LEVVLTTG 120
+ +V G
Sbjct: 239 VRLVCNKG 246
>sp|Q5V0I9|AUBA_HALMA RNA-binding protein AU-1 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=aubA PE=3
SV=1
Length = 466
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 15/67 (22%)
Query: 132 RLLHEEGVEIVNASFNVVED-------------TIFHTIHSKQIGDSGSDHDASARISER 178
RLL E G E+V AS +ED T+ T + +G G DHDA+A +++R
Sbjct: 15 RLLREAGHEVVQAS-GPIEDRFDGEFADERAAVTVTTTDDQQGVGVIG-DHDAAAAVTDR 72
Query: 179 LKKFGQD 185
L + G+D
Sbjct: 73 LTELGRD 79
>sp|Q9FKQ6|BH099_ARATH Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2
SV=1
Length = 296
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 9 RTDRKTIERNRRNQMKALYSTLNSIVP--HQRPMEATSLPDQLDEATKYIKRLQTNLERM 66
R + +ERNRR QM S L S++P + +P + S+ ++ Y+K+L+ L+ +
Sbjct: 101 RMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASI---IEGTISYLKKLEQRLQSL 157
Query: 67 K 67
+
Sbjct: 158 E 158
>sp|P13902|INO4_YEAST Protein INO4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=INO4 PE=1 SV=1
Length = 151
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 9 RTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKE 68
R + + E+ RR +A++ L ++VP +P E+ S E Y+K L + L + E
Sbjct: 47 RINHVSSEKKRRELERAIFDELVAVVPDLQPQESRS------ELIIYLKSL-SYLSWLYE 99
Query: 69 RKERLMG--IEKPDAAAATSSSGNSSGTITTGLRS--PQIEIHEMG 110
R E+L I K +A +SSS + +R P+ I E+G
Sbjct: 100 RNEKLRKQIIAKHEAKTGSSSSSDPVQEQNGNIRDLVPKELIWELG 145
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERM 66
ER RR+++ TL +VP+ + S+ LDE +Y+K+LQ + M
Sbjct: 222 ERKRRDKINQRMKTLQKLVPNSSKTDKASM---LDEVIEYLKQLQAQVSMM 269
>sp|B1KJM2|T23O_SHEWM Tryptophan 2,3-dioxygenase OS=Shewanella woodyi (strain ATCC 51908
/ MS32) GN=kynA PE=3 SV=1
Length = 286
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 52 ATKYIKRLQTNLERMKERKERLMGIEKPDAAAATSSSGNSSGTITTGLRSPQ-------- 103
A K I R++ L ++ + L + D + G SSG + G R +
Sbjct: 88 AFKVISRVKQILNQLTQSWNILSTLTPVDYLKFRDALGRSSGFQSYGYRKIEFLLGNKNA 147
Query: 104 --IEIHEMGSALEVVLTTGLDFQFMFIETIRLLHEEGVEIVNASFN 147
I++HE + L L+ ++ E IR+LH++G+ I +++ N
Sbjct: 148 DLIQVHESNEQVHSELQGILERPSLYDEVIRVLHKQGLPIDDSALN 193
>sp|Q9ZVB5|BH100_ARATH Transcription factor bHLH100 OS=Arabidopsis thaliana GN=BHLH100
PE=2 SV=1
Length = 242
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQ 60
ER RR ++ ++S+L S +P + S+ + +A KYI LQ
Sbjct: 70 ERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQ 114
>sp|P20389|MYC2_MARMO N-myc 2 proto-oncogene protein OS=Marmota monax GN=N-MYC2 PE=4 SV=1
Length = 454
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 9 RTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKE 68
R + +ER RRN +++ ++TL VP E + L +A +Y+ LQ ++
Sbjct: 373 RRNHNILERQRRNDLRSSFTTLRDHVPELVKNEKAAKVVILKKACEYVHYLQAKEHQLLM 432
Query: 69 RKERL 73
KE+L
Sbjct: 433 EKEKL 437
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKE 71
ER RR ++ + L++++P + + ++ LD+A +K+LQ L +KE KE
Sbjct: 124 ERKRREKLSEKFIALSALLPGLKKADKVTI---LDDAISRMKQLQEQLRTLKEEKE 176
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERK 70
ER RR ++ + L ++VP+ M+ TSL L++A YI L++ E ++ K
Sbjct: 348 ERMRREKLNHRFYALRAVVPNVSKMDKTSL---LEDAVCYINELKSKAENVELEK 399
>sp|Q64210|MYC2_SPEBE N-myc 2 proto-oncogene protein OS=Spermophilus beecheyi GN=N-MYC2
PE=4 SV=1
Length = 454
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 6 SSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLER 65
S R + +ER RRN +++ ++TL VP E + L +A +Y+ LQ +
Sbjct: 370 SVRRRNHNILERQRRNDLRSSFTTLRDHVPELVKNEKAAKVVILKKACEYVHYLQAKEHQ 429
Query: 66 MKERKERL 73
+ KE+L
Sbjct: 430 LLMEKEKL 437
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 6 SSSRTDRKTIE-RNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNL 63
S+ TD +++ R+RR+++ + L S+VP M+ S+ LDEA Y+K L+ +
Sbjct: 41 STLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSM---LDEAISYVKFLKAQI 96
>sp|P15171|MYCB_XENLA Transcriptional regulator Myc-B OS=Xenopus laevis GN=myc-b PE=2
SV=1
Length = 420
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 9 RTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYI-------KRLQT 61
R +ER RRN++K + L VP R E L +AT+Y +RL
Sbjct: 338 RRTHNVLERQRRNELKLSFFALRDQVPRWRNNEKAPKVVILKKATEYAISMQEDERRLIR 397
Query: 62 NLERMKERKERL 73
E++K RKE+L
Sbjct: 398 ETEQLKYRKEQL 409
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 15 IERNRRNQMKALYSTLNSIVPH---QRPMEATSLPDQLDEATKYIKRLQTNLERMKERKE 71
+ERNRR QM + L S++P QR +A+ + A Y+K L+ L+ M+ ++
Sbjct: 120 VERNRRKQMNEYLAVLRSLMPSSYAQRGDQASI----VGGAINYVKELEHILQSMEPKRT 175
Query: 72 RLMGIEKPDAAAATSSSGNSSGTITTGLRSPQ 103
R D +S+ + G T PQ
Sbjct: 176 RTH-----DPKGDKTSTSSLVGPFTDFFSFPQ 202
>sp|P18444|MYCN_CHICK N-myc proto-oncogene protein OS=Gallus gallus GN=MYCN PE=3 SV=1
Length = 441
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 6 SSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLER 65
S R + +ER RRN +++ + TL VP E + L +AT+Y+ LQ ++
Sbjct: 357 SERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEQK 416
Query: 66 MKERKERL 73
+ KE+L
Sbjct: 417 LLLEKEKL 424
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKER 69
E+ RR+++ L S++P+ + S+ LDEA +Y+K+LQ ++ + R
Sbjct: 206 EKRRRSRINEKMKALQSLIPNSNKTDKASM---LDEAIEYLKQLQLQVQMLTMR 256
>sp|Q8CNQ3|MGT_STAES Monofunctional glycosyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=mgt PE=3 SV=1
Length = 269
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 TIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKER 69
T+++N N + S L S + + + A S+ D D + YI R++TNLE+MK++
Sbjct: 200 TVDKNNSNMSQI--SVLQSAILASK-VNAPSVYDVNDMSNNYINRVKTNLEKMKQQ 252
>sp|Q5HN60|MGT_STAEQ Monofunctional glycosyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=mgt PE=3 SV=1
Length = 269
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 14 TIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKER 69
T+++N N + S L S + + + A S+ D D + YI R++TNLE+MK++
Sbjct: 200 TVDKNNSNMSQI--SVLQSAILASK-VNAPSVYDVNDMSNNYINRVKTNLEKMKQQ 252
>sp|P70562|BHA15_RAT Class A basic helix-loop-helix protein 15 OS=Rattus norvegicus
GN=Bhlha15 PE=1 SV=1
Length = 197
Score = 30.8 bits (68), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLMG 75
ER R +++ + L ++PH R + S + L A YIK L + M RL G
Sbjct: 81 ERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATILTMSS--SRLPG 138
Query: 76 IEKPDAA 82
+E P A
Sbjct: 139 LEAPGPA 145
>sp|Q9QYC3|BHA15_MOUSE Class A basic helix-loop-helix protein 15 OS=Mus musculus
GN=Bhlha15 PE=2 SV=1
Length = 197
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLMG 75
ER R +++ + L ++PH R + S + L A YIK L + M RL G
Sbjct: 81 ERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATILTMSS--SRLPG 138
Query: 76 IEKPDAAAA 84
+E P A
Sbjct: 139 LEAPGPAPG 147
>sp|Q9MTH5|YCF1_OENEH Putative membrane protein ycf1 OS=Oenothera elata subsp. hookeri
GN=ycf1 PE=3 SV=3
Length = 2463
Score = 30.8 bits (68), Expect = 5.2, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 33/69 (47%)
Query: 5 PSSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLE 64
P D + + N+++A++ ++ + ++ + T PD D+ + K + LE
Sbjct: 1443 PEEKVADPEKEPSDLDNELRAVWDEIDKVTKERKKIVFTPKPDSPDKLVQAKKNILKKLE 1502
Query: 65 RMKERKERL 73
R+K R+ +
Sbjct: 1503 RIKSRRHKF 1511
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 14 TIERNRRNQMKALYSTLNSIVP--HQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKE 71
T+ERNRR QM + L S++P + + + S+ + +YI LQ L+ ++ +K+
Sbjct: 106 TVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASI---IGGVVEYISELQQVLQSLEAKKQ 162
Query: 72 R 72
R
Sbjct: 163 R 163
>sp|Q731H9|BIOF_BACC1 Putative 8-amino-7-oxononanoate synthase OS=Bacillus cereus (strain
ATCC 10987) GN=bioF PE=3 SV=1
Length = 395
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKERKERLMG 75
+R R N + L L + P QR + T +D T Y++ L +KE+ ++
Sbjct: 150 KRYRHNDLDHLEKLLKTASPEQRKLIVTDTVFSMDGDTAYVRELV----ELKEKYGAILI 205
Query: 76 IEKPDAAAATSSSGNSSGTITTGLRSPQIEIHEMGS 111
+++ A+ S G I L + +I+IH MG+
Sbjct: 206 VDEAHASGIYGSGGAGLSHIEEDL-AQKIDIH-MGT 239
>sp|P04198|MYCN_HUMAN N-myc proto-oncogene protein OS=Homo sapiens GN=MYCN PE=1 SV=2
Length = 464
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 6 SSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLER 65
S R + +ER RRN +++ + TL VP E + L +AT+Y+ LQ +
Sbjct: 380 SERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQ 439
Query: 66 MKERKERLMG 75
+ KE+L
Sbjct: 440 LLLEKEKLQA 449
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 16 ERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERM 66
ER RR+++ L ++P+ ++ S+ LDEA +Y+K LQ ++ M
Sbjct: 352 ERRRRDRINEKMRALQELIPNCNKVDKASM---LDEAIEYLKSLQLQVQIM 399
>sp|Q61976|MYCN_MARMO N-myc proto-oncogene protein OS=Marmota monax GN=MYCN PE=3 SV=1
Length = 460
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 6 SSSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLER 65
S R + +ER RRN +++ + TL VP E + L +AT+Y+ LQ +
Sbjct: 376 SERRRNHNILERQRRNDLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAEEHQ 435
Query: 66 MKERKERLMG 75
+ KE+L
Sbjct: 436 LLLEKEKLQA 445
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 13 KTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERM 66
K ER RR++ L ++P+ + SL LDEA KY++ LQ ++ M
Sbjct: 235 KLYERKRRDEFNKKMRALQDLLPNCYKDDKASL---LDEAIKYMRTLQLQVQMM 285
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 10 TDRKTIE-RNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKE 68
TD +T+ R RR ++ L ++VP M+ S+ LDEA Y+K L+ ++ ++
Sbjct: 277 TDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASM---LDEAANYLKFLRAQVKALEN 333
Query: 69 RKERL 73
+ +L
Sbjct: 334 LRPKL 338
>sp|P31822|POL_FIVT2 Pol polyprotein OS=Feline immunodeficiency virus (isolate TM2)
GN=pol PE=3 SV=1
Length = 1124
Score = 30.4 bits (67), Expect = 7.2, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 78 KPDAAAAT--SSSG---------NSSGTITTGLRSPQIEIHEMGSALEVVLTTGLDFQFM 126
KP AA +T +S+G N+ GT TT R P+I+I G ++ +L TG D +
Sbjct: 16 KPSAANSTICTSNGGETIRFINYNTIGTTTTLERRPEIQIFVNGHPIKFLLDTGADITIL 75
>sp|P06295|MYC_AVIMD Viral myc transforming protein OS=Avian myelocytomatosis virus HBI
GN=MYC PE=3 SV=2
Length = 416
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 9 RTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQTNLERMKE 68
R +ER RRN++K + L +P E L +AT+Y+ +Q++ R+
Sbjct: 333 RRTHNVLERQRRNELKLRFFALRDQIPEVANNEKAPKVGILKKATEYVLSIQSDEHRLIA 392
Query: 69 RKERL 73
KE+L
Sbjct: 393 EKEQL 397
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 7 SSRTDRKTIERNRRNQMKALYSTLNSIVPHQRPMEATSLPDQLDEATKYIKRLQ 60
S+ D ER RR ++ + L++++P + M+ S+ L +A K+IK LQ
Sbjct: 122 SNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASV---LGDAIKHIKYLQ 172
>sp|P02177|MYG_ESCGI Myoglobin OS=Eschrichtius gibbosus GN=MB PE=1 SV=2
Length = 154
Score = 30.0 bits (66), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 149 VEDTIFHTIHSKQIGDSGSDHDASARISERLKKFGQDGSA 188
+ D I H +HS+ GD G+ DA A +++ L+ F +D +A
Sbjct: 108 ISDAIIHVLHSRHPGDFGA--DAQAAMNKALELFRKDIAA 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.343
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,111,225
Number of Sequences: 539616
Number of extensions: 2335971
Number of successful extensions: 8294
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 8185
Number of HSP's gapped (non-prelim): 195
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)