Query 029714
Match_columns 189
No_of_seqs 129 out of 1053
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 03:20:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029714.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029714hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 4.3E-66 1.5E-70 449.4 16.7 189 1-189 127-315 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 7.3E-66 2.5E-70 448.3 17.2 189 1-189 131-319 (319)
3 3uw0_A Pectinesterase; right-h 100.0 2.7E-54 9.4E-59 381.1 14.7 165 1-180 175-364 (364)
4 2nsp_A Pectinesterase A; micha 100.0 4.7E-54 1.6E-58 377.1 14.6 166 1-180 149-340 (342)
5 3grh_A YBHC, acyl-COA thioeste 100.0 9.9E-47 3.4E-51 336.5 12.2 137 1-145 242-416 (422)
6 1xg2_A Pectinesterase 1; prote 96.0 0.044 1.5E-06 47.0 10.0 90 8-112 113-204 (317)
7 2nsp_A Pectinesterase A; micha 96.0 0.035 1.2E-06 48.1 9.5 90 10-113 137-230 (342)
8 1gq8_A Pectinesterase; hydrola 95.9 0.043 1.5E-06 47.1 9.4 90 8-112 117-208 (319)
9 3grh_A YBHC, acyl-COA thioeste 95.3 0.085 2.9E-06 47.1 9.4 90 7-112 227-330 (422)
10 3uw0_A Pectinesterase; right-h 95.1 0.11 3.7E-06 45.4 9.4 85 12-112 165-254 (364)
11 1ru4_A Pectate lyase, PEL9A; p 92.8 0.53 1.8E-05 41.4 9.2 89 8-110 132-227 (400)
12 2hp4_A T-cell surface glycopro 29.3 32 0.0011 23.4 2.4 22 14-37 90-111 (114)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=4.3e-66 Score=449.43 Aligned_cols=189 Identities=62% Similarity=1.047 Sum_probs=176.4
Q ss_pred CccccceeeecCCcEEeecCEEeeeceeEecCcceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEccEEeecC
Q 029714 1 MLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATS 80 (189)
Q Consensus 1 ~~g~QDTL~~~~gr~yf~~c~I~G~vDfIfG~g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 80 (189)
|+|+|||||++++||||++|+|+|+||||||+|+|+||+|+|+++++..++.++||||+|+++++++||||+||+|++++
T Consensus 127 f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 127 IDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp EECSTTCEEECSSEEEEESCEEEESSSCEEECCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred eCccccceeecCccEEEEeeEEEeceeEEcCCceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 68999999999999999999999999999999999999999999887666789999999999999999999999999988
Q ss_pred CCCCCCCcccEEecCCCCCCCcEEEEcCcCCCcccCCCCCCCCCCCCCCccEEEEeecccCCCCCCCceeeccceeeCCH
Q 029714 81 DLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSA 160 (189)
Q Consensus 81 ~~~~~~~~~~~yLGRpW~~~s~vv~~~~~l~~~I~~~GW~~w~~~~~~~t~~f~Ey~n~GpGa~~s~Rv~w~~~~~~lt~ 160 (189)
++.+...+.++||||||++++++||++|+|+++|+|+||.+|++..++++++|+||+|+|||+++++||+|+++++++++
T Consensus 207 ~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~l~~~ 286 (317)
T 1xg2_A 207 DLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDP 286 (317)
T ss_dssp TTGGGTTTSCEEEECCSSTTCEEEEESCEECTTBCTTCSCCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEEECCH
T ss_pred CccccccceeEEeecccCCCceEEEEecccCCcccccccccCCCCCCcCceEEEEEcCCCCCCCcccccccccccccCCH
Confidence 65432223589999999999999999999999999999999998888899999999999999999999999998877788
Q ss_pred HHHhcCCccccccCCCCCCCCCCCCCCCC
Q 029714 161 TEAQAFTPGSFIAGSSWLGSTGFPFSLGL 189 (189)
Q Consensus 161 ~eA~~yt~~~~~~g~~W~p~~~~p~~~~~ 189 (189)
+||++|++.+||+|++|+|.+++||.+||
T Consensus 287 ~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 315 (317)
T 1xg2_A 287 AKAMPFTVAKLIQGGSWLRSTGVAYVDGL 315 (317)
T ss_dssp HHHGGGSHHHHSCTHHHHGGGCCCCCCSS
T ss_pred HHHHHhhHHhhcCCCCCcCCCCccccccc
Confidence 99999999999999899999999999997
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=7.3e-66 Score=448.33 Aligned_cols=189 Identities=85% Similarity=1.387 Sum_probs=176.1
Q ss_pred CccccceeeecCCcEEeecCEEeeeceeEecCcceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEccEEeecC
Q 029714 1 MLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATS 80 (189)
Q Consensus 1 ~~g~QDTL~~~~gr~yf~~c~I~G~vDfIfG~g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 80 (189)
|+|+|||||++++||||++|+|+|+||||||+|+|+||+|+|+++++..++.++||||+|+++++++||||+||+|++++
T Consensus 131 f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 131 ILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp EECSTTCEEECSSEEEEESCEEEESSSCEEESCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred ECccceeeeecCccEEEEecEEEeeeeEEecCCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 68999999999999999999999999999999999999999999887666789999999999999999999999999987
Q ss_pred CCCCCCCcccEEecCCCCCCCcEEEEcCcCCCcccCCCCCCCCCCCCCCccEEEEeecccCCCCCCCceeeccceeeCCH
Q 029714 81 DLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSA 160 (189)
Q Consensus 81 ~~~~~~~~~~~yLGRpW~~~s~vv~~~~~l~~~I~~~GW~~w~~~~~~~t~~f~Ey~n~GpGa~~s~Rv~w~~~~~~lt~ 160 (189)
++.+...+.++||||||++++++||++|+|+++|+|+||.+|++..++++++|+||+|+|||+++++||+|+++++++++
T Consensus 211 ~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~l~~~ 290 (319)
T 1gq8_A 211 DLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSS 290 (319)
T ss_dssp TTGGGGGGSCEEEECCSSTTCEEEEESCEECTTBCTTCCCCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEECCCH
T ss_pred CccccccceeEEecccCCCcceEEEEeccCCCcccccccCcCCCCCCCCeeEEEEEccccCCCCcccccccccccccCCH
Confidence 65432223479999999999999999999999999999999998888899999999999999999999999998877788
Q ss_pred HHHhcCCccccccCCCCCCCCCCCCCCCC
Q 029714 161 TEAQAFTPGSFIAGSSWLGSTGFPFSLGL 189 (189)
Q Consensus 161 ~eA~~yt~~~~~~g~~W~p~~~~p~~~~~ 189 (189)
+||++|++.+||+|++|+|.+++||.+||
T Consensus 291 ~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 291 TEAQGFTPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp HHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred HHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence 99999999999999899999999999997
No 3
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=2.7e-54 Score=381.13 Aligned_cols=165 Identities=30% Similarity=0.542 Sum_probs=141.4
Q ss_pred Cccccceeeec-CCcEEeecCEEeeeceeEecCcceeeEecEEEEecCCC--CCcceEEecCCCCCCCCeeEEEEccEEe
Q 029714 1 MLAYQDTLYVH-SNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNS--GQKNMVTAQGRADPNQNTGIVIQKSRIG 77 (189)
Q Consensus 1 ~~g~QDTL~~~-~gr~yf~~c~I~G~vDfIfG~g~a~fe~c~i~~~~~~~--~~~~~itA~~r~~~~~~~G~vf~~c~i~ 77 (189)
|+|+|||||++ .+||||++|+|||+||||||+|+|+||+|+|+++++.. ...++||||+| ++++++||||+||+|+
T Consensus 175 f~G~QDTLy~~~~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~-~~~~~~G~vf~~c~i~ 253 (364)
T 3uw0_A 175 LEGYQDTLYSKTGSRSYFSDCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPST-LTTSPYGLIFINSRLT 253 (364)
T ss_dssp EECSBSCEEECTTCEEEEESCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEECC-CTTCSCCEEEESCEEE
T ss_pred EEecccceEeCCCCCEEEEcCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCCc-CCCCCcEEEEEeeEEe
Confidence 68999999999 89999999999999999999999999999999986532 34699999975 4677899999999999
Q ss_pred ecCCCCCCCCcccEEecCCCCCC--------------CcEEEEcCcCCCcccCCCCCCCCCCCC--------CCccEEEE
Q 029714 78 ATSDLKPVQGSFPTYLGRPWKEY--------------SRTVIMQSSITDVIHPAGWHEWDGNFA--------LNTLFYGE 135 (189)
Q Consensus 78 ~~~~~~~~~~~~~~yLGRpW~~~--------------s~vv~~~~~l~~~I~~~GW~~w~~~~~--------~~t~~f~E 135 (189)
+++++.. +++||||||+++ +|||||+|+|+++| +||.+|++... .++++|+|
T Consensus 254 ~~~~~~~----~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~E 327 (364)
T 3uw0_A 254 KEPGVPA----NSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFE 327 (364)
T ss_dssp ECTTCCS----SCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEE
T ss_pred cCCCCcc----ccEEeccccccccccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEE
Confidence 9876432 478999999985 49999999999999 99999976421 24678999
Q ss_pred eecccCCCCCCCceeeccceeeCCHHHHhcCCccccccCCCCCCC
Q 029714 136 HQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGS 180 (189)
Q Consensus 136 y~n~GpGa~~s~Rv~w~~~~~~lt~~eA~~yt~~~~~~g~~W~p~ 180 (189)
|+|+|||++++.+ +.+|+++||++|++++||+| |+|.
T Consensus 328 y~n~GpGa~~~~~------r~~ls~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 328 ANSQGPGAAINEG------RRQLSAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp ESCBSTTCCCSTT------SCBCCHHHHGGGSHHHHSTT--CCC-
T ss_pred EeCCCCCCCcCCc------eeECCHHHHhhccHHHhhcC--CCCC
Confidence 9999999986432 23569999999999999987 9984
No 4
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=4.7e-54 Score=377.15 Aligned_cols=166 Identities=35% Similarity=0.597 Sum_probs=143.0
Q ss_pred CccccceeeecCCcEEeecCEEeeeceeEecCcceeeEecEEEEecCCC-C---CcceEEecCCCCCCCCeeEEEEccEE
Q 029714 1 MLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNS-G---QKNMVTAQGRADPNQNTGIVIQKSRI 76 (189)
Q Consensus 1 ~~g~QDTL~~~~gr~yf~~c~I~G~vDfIfG~g~a~fe~c~i~~~~~~~-~---~~~~itA~~r~~~~~~~G~vf~~c~i 76 (189)
|+|+|||||++.+||||++|+|||+||||||+|+|+||+|+|+++++.. + ..++||||++ ++++++||||+||+|
T Consensus 149 f~G~QDTLy~~~gr~~~~~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~-~~~~~~G~vf~~c~i 227 (342)
T 2nsp_A 149 LVGYQATLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPST-NINQKYGLVITNSRV 227 (342)
T ss_dssp EECSTTCEEECSSEEEEESCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEECC-BTTCSCCEEEESCEE
T ss_pred EecccceEEECCCCEEEEcCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccCC-CCCCCCEEEEEcCEE
Confidence 6899999999999999999999999999999999999999999986432 2 1389999975 567899999999999
Q ss_pred eecCCCCCCCCcccEEecCCCCCCC--------------cEEEEcCcCCCcccCCCCCCCCCCC--------CCCccEEE
Q 029714 77 GATSDLKPVQGSFPTYLGRPWKEYS--------------RTVIMQSSITDVIHPAGWHEWDGNF--------ALNTLFYG 134 (189)
Q Consensus 77 ~~~~~~~~~~~~~~~yLGRpW~~~s--------------~vv~~~~~l~~~I~~~GW~~w~~~~--------~~~t~~f~ 134 (189)
+++++... .+++||||||++++ |+|||+|+|+++|+ ||.+|++.. ..++++|+
T Consensus 228 ~~~~~~~~---~~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~ 302 (342)
T 2nsp_A 228 IRESDSVP---AKSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFF 302 (342)
T ss_dssp EESSTTSC---TTCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEE
T ss_pred ecCCCCCc---cccEEEEeccccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEE
Confidence 99876332 24899999999998 99999999999998 999998642 23578999
Q ss_pred EeecccCCCCCCCceeeccceeeCCHHHHhcCCccccccCCCCCCC
Q 029714 135 EHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGS 180 (189)
Q Consensus 135 Ey~n~GpGa~~s~Rv~w~~~~~~lt~~eA~~yt~~~~~~g~~W~p~ 180 (189)
||+|+|||++++. + +.+|+++||++|++.+||+| |+|.
T Consensus 303 EY~n~GpGa~~~~---~---~~~l~~~ea~~~t~~~~i~~--W~p~ 340 (342)
T 2nsp_A 303 EYKSYGAGATVSK---D---RRQLTDAQAAEYTQSKVLGD--WTPT 340 (342)
T ss_dssp EESCBSTTCCCST---T---SCBCCHHHHGGGSHHHHHTT--CCCC
T ss_pred EEecccCCCCCCC---C---ceECCHHHHHhhhHHhhhcc--CCCC
Confidence 9999999998742 1 13569999999999999986 9986
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=9.9e-47 Score=336.54 Aligned_cols=137 Identities=26% Similarity=0.320 Sum_probs=118.6
Q ss_pred Cccccceeee------------cCCcEEeecCEEeeeceeEecCcceeeEecEEEEecCCCCCcceEEecCCCCCCCCee
Q 029714 1 MLAYQDTLYV------------HSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTG 68 (189)
Q Consensus 1 ~~g~QDTL~~------------~~gr~yf~~c~I~G~vDfIfG~g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G 68 (189)
|+|||||||+ +.+||||++|+|||+||||||+|+||||+|+|+++++..+..++|||+ |+++++++|
T Consensus 242 f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~ITA~-~t~~~~~~G 320 (422)
T 3grh_A 242 ILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAP-ATLSNIYYG 320 (422)
T ss_dssp EECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEEEE-CCBTTCCCC
T ss_pred EEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEEec-CCCCCCCCE
Confidence 6899999998 468999999999999999999999999999999987654457999998 566788999
Q ss_pred EEEEccEEeecCCCCCCCCcccEEecCCCCCCCc----EEEEcCcCCCcccC-CCCCCCCCCC-C---------------
Q 029714 69 IVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSR----TVIMQSSITDVIHP-AGWHEWDGNF-A--------------- 127 (189)
Q Consensus 69 ~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~s~----vv~~~~~l~~~I~~-~GW~~w~~~~-~--------------- 127 (189)
|||+||+|+++++ +++||||||+++++ |||++|+|+++|+| +||.+|.... +
T Consensus 321 fvf~nC~ita~~~-------~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~~~~~~~~~~~~~ 393 (422)
T 3grh_A 321 FLAVNSRFNAFGD-------GVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQ 393 (422)
T ss_dssp EEEESCEEEECSS-------SCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCCCCCEEETTTEEE
T ss_pred EEEECCEEEeCCC-------CCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCccccccccccccccc
Confidence 9999999998642 48999999999987 79999999999998 9999994321 0
Q ss_pred -----CCccEEEEeecccCCCCC
Q 029714 128 -----LNTLFYGEHQNAGAGAGT 145 (189)
Q Consensus 128 -----~~t~~f~Ey~n~GpGa~~ 145 (189)
.+..||+||+|+|+|+-.
T Consensus 394 r~l~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 394 RNLNDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp CCTTCTTSCEEEEESCBSGGGC-
T ss_pred ccCCCcchhheeEecccCCCccc
Confidence 124599999999999864
No 6
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.99 E-value=0.044 Score=47.04 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=60.7
Q ss_pred eeecCCcEEeecCEEeeeceeEecC-cceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEccEEeecCCCCCCC
Q 029714 8 LYVHSNRQFFVNCLIAGTVDFIFGN-AAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQ 86 (189)
Q Consensus 8 L~~~~gr~yf~~c~I~G~vDfIfG~-g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~ 86 (189)
|++...|.-|++|.|.|.-|-||-. ++.+|++|.|.=. --+|.-.+ --||++|+|.........
T Consensus 113 l~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~------vDFIfG~~--------~avf~~c~i~~~~~~~~~- 177 (317)
T 1xg2_A 113 LRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGT------VDFIFGNA--------AVVFQKCQLVARKPGKYQ- 177 (317)
T ss_dssp EEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEES------SSCEEECC--------EEEEESCEEEECCCSTTC-
T ss_pred EEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEec------eeEEcCCc--------eEEEeeeEEEEeccCCCC-
Confidence 4566678999999999999999954 7899999999842 34677432 279999999875421110
Q ss_pred CcccEEecCCC-CCCCcEEEEcCcCCC
Q 029714 87 GSFPTYLGRPW-KEYSRTVIMQSSITD 112 (189)
Q Consensus 87 ~~~~~yLGRpW-~~~s~vv~~~~~l~~ 112 (189)
...-+-=||.= ....-.+|.+|.|..
T Consensus 178 ~~~itA~~r~~~~~~~G~vf~~c~i~~ 204 (317)
T 1xg2_A 178 QNMVTAQGRTDPNQATGTSIQFCNIIA 204 (317)
T ss_dssp CEEEEEECCCCTTSCCEEEEESCEEEE
T ss_pred ccEEEecCcCCCCCCcEEEEECCEEec
Confidence 00012235532 233468899999964
No 7
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.98 E-value=0.035 Score=48.07 Aligned_cols=90 Identities=13% Similarity=0.279 Sum_probs=60.3
Q ss_pred ecCCcEEeecCEEeeeceeEec-CcceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEccEEeecCCCCCCCCc
Q 029714 10 VHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGS 88 (189)
Q Consensus 10 ~~~gr~yf~~c~I~G~vDfIfG-~g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~ 88 (189)
+...|.-|++|.|.|.-|=||- .++.+|.+|.|.= .--+|.-.+ --||++|+|.........+..
T Consensus 137 v~~d~~~f~~c~f~G~QDTLy~~~gr~~~~~c~I~G------~vDFIFG~a--------~a~f~~c~i~~~~~~~~~~~~ 202 (342)
T 2nsp_A 137 KSGDRAYFKDVSLVGYQATLYVSGGRSFFSDCRISG------TVDFIFGDG--------TALFNNCDLVSRYRADVKSGN 202 (342)
T ss_dssp TTCBSEEEEEEEEECSTTCEEECSSEEEEESCEEEE------SEEEEEESS--------EEEEESCEEEECCCTTSCTTS
T ss_pred eccCcEEEEeeEEecccceEEECCCCEEEEcCEEEe------ceEEEeCCc--------eEEEecCEEEEecCccccccc
Confidence 4566889999999999999995 4789999999993 245787543 278999999875321110000
Q ss_pred ccEEe---cCCCCCCCcEEEEcCcCCCc
Q 029714 89 FPTYL---GRPWKEYSRTVIMQSSITDV 113 (189)
Q Consensus 89 ~~~yL---GRpW~~~s~vv~~~~~l~~~ 113 (189)
...|+ +|+-....-.||.+|+|...
T Consensus 203 ~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 203 VSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp CCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred CceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 01233 34333344589999999643
No 8
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=95.88 E-value=0.043 Score=47.12 Aligned_cols=90 Identities=23% Similarity=0.265 Sum_probs=60.7
Q ss_pred eeecCCcEEeecCEEeeeceeEecC-cceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEccEEeecCCCCCCC
Q 029714 8 LYVHSNRQFFVNCLIAGTVDFIFGN-AAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQ 86 (189)
Q Consensus 8 L~~~~gr~yf~~c~I~G~vDfIfG~-g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~ 86 (189)
|++...|.-|++|.|.|.-|=+|-. ++.+|++|.|.=. .-+|.-.+ --||++|+|.........
T Consensus 117 l~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~------vDFIfG~~--------~a~f~~c~i~~~~~~~~~- 181 (319)
T 1gq8_A 117 LRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGT------VDFIFGNA--------AVVLQDCDIHARRPGSGQ- 181 (319)
T ss_dssp EEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEES------SSCEEESC--------EEEEESCEEEECCCSTTC-
T ss_pred EEecCCcEEEEEeEECccceeeeecCccEEEEecEEEee------eeEEecCC--------cEEEEeeEEEEecCCCCC-
Confidence 4566678899999999999999954 6899999999842 34677432 278999999875421110
Q ss_pred CcccEEecCCC-CCCCcEEEEcCcCCC
Q 029714 87 GSFPTYLGRPW-KEYSRTVIMQSSITD 112 (189)
Q Consensus 87 ~~~~~yLGRpW-~~~s~vv~~~~~l~~ 112 (189)
...-+-=||.= ....-.+|.+|.|..
T Consensus 182 ~~~itA~~r~~~~~~~G~vf~~c~i~~ 208 (319)
T 1gq8_A 182 KNMVTAQGRTDPNQNTGIVIQKSRIGA 208 (319)
T ss_dssp CEEEEEECCCSTTCCCEEEEESCEEEE
T ss_pred ceEEEeCCCCCCCCCceEEEECCEEec
Confidence 00012235532 233568999999964
No 9
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=95.30 E-value=0.085 Score=47.05 Aligned_cols=90 Identities=14% Similarity=0.205 Sum_probs=61.6
Q ss_pred eeeecCCcEEeecCEEeeeceeEec-------------CcceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEc
Q 029714 7 TLYVHSNRQFFVNCLIAGTVDFIFG-------------NAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQK 73 (189)
Q Consensus 7 TL~~~~gr~yf~~c~I~G~vDfIfG-------------~g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~ 73 (189)
.|++..-|.-|++|.+.|.-|-+|= .++.+|.+|.|.= .--+|.=.+ =-||++
T Consensus 227 AL~v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeG------tVDFIFG~a--------~AvFe~ 292 (422)
T 3grh_A 227 ALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEG------DVDIVSGRG--------AVVFDN 292 (422)
T ss_dssp SEEECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEE------SEEEEEESS--------EEEEES
T ss_pred EEEecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEec------cccEEccCc--------eEEEEe
Confidence 4666677999999999999999993 4789999999983 345787532 268999
Q ss_pred cEEeecCCCCCCCCcccEEecC-CCCCCCcEEEEcCcCCC
Q 029714 74 SRIGATSDLKPVQGSFPTYLGR-PWKEYSRTVIMQSSITD 112 (189)
Q Consensus 74 c~i~~~~~~~~~~~~~~~yLGR-pW~~~s~vv~~~~~l~~ 112 (189)
|+|..-..... . .+-+.-+| +=....-.||.+|.|..
T Consensus 293 C~I~s~~~~~~-~-~g~ITA~~t~~~~~~Gfvf~nC~ita 330 (422)
T 3grh_A 293 TEFRVVNSRTQ-Q-EAYVFAPATLSNIYYGFLAVNSRFNA 330 (422)
T ss_dssp CEEEECCSSCS-S-CCEEEEECCBTTCCCCEEEESCEEEE
T ss_pred eEEEEecCCCC-C-ceEEEecCCCCCCCCEEEEECCEEEe
Confidence 99987542110 0 11222233 22233457999999974
No 10
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.10 E-value=0.11 Score=45.43 Aligned_cols=85 Identities=15% Similarity=0.247 Sum_probs=58.7
Q ss_pred CCcEEeecCEEeeeceeEec--CcceeeEecEEEEecCCCCCcceEEecCCCCCCCCeeEEEEccEEeecCCCCCCCCcc
Q 029714 12 SNRQFFVNCLIAGTVDFIFG--NAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSF 89 (189)
Q Consensus 12 ~gr~yf~~c~I~G~vDfIfG--~g~a~fe~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~ 89 (189)
.-|..|++|.+.|.-|=+|= .++.+|.+|.|.= .--+|.=.+ =-||++|+|......... ..
T Consensus 165 ~D~~~f~~C~f~G~QDTLy~~~~gr~yf~~c~I~G------tvDFIFG~a--------~a~f~~c~i~~~~~~~~~--~~ 228 (364)
T 3uw0_A 165 SDKARFKAVKLEGYQDTLYSKTGSRSYFSDCEISG------HVDFIFGSG--------ITVFDNCNIVARDRSDIE--PP 228 (364)
T ss_dssp CEEEEEEEEEEECSBSCEEECTTCEEEEESCEEEE------SEEEEEESS--------EEEEESCEEEECCCSSCS--SC
T ss_pred CCeEEEEeeEEEecccceEeCCCCCEEEEcCEEEc------CCCEECCcc--------eEEEEeeEEEEeccCccc--CC
Confidence 45789999999999999994 5899999999983 346787533 268999999875321100 01
Q ss_pred cEEe---cCCCCCCCcEEEEcCcCCC
Q 029714 90 PTYL---GRPWKEYSRTVIMQSSITD 112 (189)
Q Consensus 90 ~~yL---GRpW~~~s~vv~~~~~l~~ 112 (189)
.-|+ +|+-....-.||.+|+|..
T Consensus 229 ~g~ITA~~~~~~~~~G~vf~~c~i~~ 254 (364)
T 3uw0_A 229 YGYITAPSTLTTSPYGLIFINSRLTK 254 (364)
T ss_dssp CEEEEEECCCTTCSCCEEEESCEEEE
T ss_pred ccEEEeCCcCCCCCcEEEEEeeEEec
Confidence 2233 4433333448999999964
No 11
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=92.76 E-value=0.53 Score=41.37 Aligned_cols=89 Identities=18% Similarity=0.063 Sum_probs=55.6
Q ss_pred eeecCCcEEeecCEEeeece---eEecCc-ceeeEecEEEEecCCC---CCcceEEecCCCCCCCCeeEEEEccEEeecC
Q 029714 8 LYVHSNRQFFVNCLIAGTVD---FIFGNA-AAVLQNCDIHARKPNS---GQKNMVTAQGRADPNQNTGIVIQKSRIGATS 80 (189)
Q Consensus 8 L~~~~gr~yf~~c~I~G~vD---fIfG~g-~a~fe~c~i~~~~~~~---~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 80 (189)
+++...+.-+++|.|++.-| +|.+.+ ..++++|+|+-..... ....-|.+... +..|.+|.+|++....
T Consensus 132 I~v~gs~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~----~g~Gn~~~~~~~~~N~ 207 (400)
T 1ru4_A 132 AYVIGSHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQK----QGPGNRFVGCRAWENS 207 (400)
T ss_dssp EEECSSSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTT----CCSCCEEESCEEESCS
T ss_pred EEEeCCCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEec----ccCCeEEECCEEeecC
Confidence 44544566899999999988 444544 7899999999764321 11123444322 1379999999998644
Q ss_pred CCCCCCCcccEEecCCCCCCCcEEEEcCcC
Q 029714 81 DLKPVQGSFPTYLGRPWKEYSRTVIMQSSI 110 (189)
Q Consensus 81 ~~~~~~~~~~~yLGRpW~~~s~vv~~~~~l 110 (189)
+. ..+|= ++++.|++.+|..
T Consensus 208 dd-------Gidl~---~~~~~v~i~nn~a 227 (400)
T 1ru4_A 208 DD-------GFDLF---DSPQKVVIENSWA 227 (400)
T ss_dssp SC-------SEECT---TCCSCCEEESCEE
T ss_pred CC-------cEEEE---ecCCCEEEEeEEE
Confidence 21 34442 3455567777654
No 12
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=29.35 E-value=32 Score=23.41 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=17.8
Q ss_pred cEEeecCEEeeeceeEecCcceee
Q 029714 14 RQFFVNCLIAGTVDFIFGNAAAVL 37 (189)
Q Consensus 14 r~yf~~c~I~G~vDfIfG~g~a~f 37 (189)
..|| |.+.-.-+++||.|..+|
T Consensus 90 g~Y~--C~~~~~~~l~Fg~g~~~~ 111 (114)
T 2hp4_A 90 GYYF--CSALSNSIMYFSHFVPVF 111 (114)
T ss_dssp EEEE--EEEEETTEEEECCCEEEC
T ss_pred EEEE--EEEecCCcEEECCCeEee
Confidence 4566 888877789999998877
Done!