BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029716
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/189 (87%), Positives = 175/189 (92%), Gaps = 6/189 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 142 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 198
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 199 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 258
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQ RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAYGAYPV
Sbjct: 259 VRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAYGAYPV 315
Query: 181 YGSHQQQVS 189
YG+HQQQVS
Sbjct: 316 YGNHQQQVS 324
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 73 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 132
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 133 GDENERSQAMTEMNGVYCSSRPMRI 157
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 340 bits (871), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/189 (87%), Positives = 175/189 (92%), Gaps = 6/189 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 236 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 293 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 352
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQ RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAYGAYPV
Sbjct: 353 VRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAYGAYPV 409
Query: 181 YGSHQQQVS 189
YG+HQQQVS
Sbjct: 410 YGNHQQQVS 418
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 105
++ N TI+VG L + + L F+ GE+AS+K+ K G GFV+F + AE
Sbjct: 80 NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139
Query: 106 EALHKLNGTVI--GKQSVRLSW 125
+ L G ++ Q RL+W
Sbjct: 140 KVLQGYAGVLMPNTDQPFRLNW 161
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 167 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 226
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 227 GDENERSQAMTEMNGVYCSSRPMRI 251
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/192 (85%), Positives = 173/192 (90%), Gaps = 11/192 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS GGYASNGA QS+GDS NTTIFV
Sbjct: 124 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGA---SVQSDGDSMNTTIFV 180
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 181 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 240
Query: 121 VRLSWGRNPANKQ-----FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
VRLSWGRNPANKQ RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAY
Sbjct: 241 VRLSWGRNPANKQANSLFMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAY 297
Query: 176 GAYPVYGSHQQQ 187
GAYPVYG+HQQQ
Sbjct: 298 GAYPVYGNHQQQ 309
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQ 97
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+
Sbjct: 54 MGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVR 113
Query: 98 FANRENAEEALHKLNGTVIGKQSVRL 123
F + +A+ ++NG + +R+
Sbjct: 114 FGDENERSQAMTEMNGVYCSSRPMRI 139
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 167/189 (88%), Positives = 178/189 (94%), Gaps = 4/189 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ GGY SNGA QG QS+GDS+NTTIFV
Sbjct: 245 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ----GGYGSNGASAQGFQSDGDSNNTTIFV 300
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCGFVQFANR+NAEEAL KLNGTVIGKQ+
Sbjct: 301 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQT 360
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQFRAD+G+ W+GAYYGGQVYDGYGYA+PPP+DPSMYAAAAAAYGAYP+
Sbjct: 361 VRLSWGRNPANKQFRADFGSPWNGAYYGGQVYDGYGYALPPPHDPSMYAAAAAAYGAYPI 420
Query: 181 YGSHQQQVS 189
YGSHQQQVS
Sbjct: 421 YGSHQQQVS 429
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 98
Q Q EG N TI++G L + + L F GEIAS+K+ + +G GFV+F
Sbjct: 82 QKQQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEF 141
Query: 99 ANRENAEEALHKLNGTVI--GKQSVRLSW 125
AE+ L G ++ +Q RL+W
Sbjct: 142 LTHATAEKVLQNYGGILMPNTEQPFRLNW 170
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + ++ + +IFVG L +VTD L++ F S+Y + + K+ KG GFV+F
Sbjct: 176 GDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRF 235
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 236 GDDSERTQAMTEMNGVYCSSRPMRI 260
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/190 (83%), Positives = 170/190 (89%), Gaps = 8/190 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSR MRIGAATPRKS+GYQ Q GGY SNGA GQ Q++GDS+NTTIFV
Sbjct: 261 MTEMNGVYCSSRAMRIGAATPRKSTGYQHQ----GGYVSNGASGQAFQADGDSTNTTIFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+QPFSQYGEI SVKIPVGKGCGFVQFA+R NAEEAL KLNGTVIGKQ+
Sbjct: 317 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQT 376
Query: 121 VRLSWGRNPANK-QFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 179
VRLSWGRNPANK Q R+D+GNQW GAYYGGQ+YDGYGYA+PPP+DPSMY AA YGAYP
Sbjct: 377 VRLSWGRNPANKQQLRSDFGNQWGGAYYGGQIYDGYGYALPPPHDPSMY---AAPYGAYP 433
Query: 180 VYGSHQQQVS 189
VYGSHQQQVS
Sbjct: 434 VYGSHQQQVS 443
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + ++ + +IFVG L +VTD L + F S+Y + + K+ KG GFV+F
Sbjct: 192 GDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRF 251
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG +++R+
Sbjct: 252 GDDNERTQAMTEMNGVYCSSRAMRI 276
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N T+++G L + + L F+ GEI S+K+ + +G GFV+F AE+ L
Sbjct: 108 NRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVL 167
Query: 109 HKLNGTVI--GKQSVRLSW 125
G ++ +Q RL+W
Sbjct: 168 QNYAGILMPNTEQPFRLNW 186
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 167/189 (88%), Gaps = 15/189 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS QS+GDS NTTIFV
Sbjct: 236 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSH------------VQSDGDSMNTTIFV 283
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAE+AL KLNGTVIGKQ+
Sbjct: 284 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 343
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQ RAD+GNQWSGAYYGGQVYDGYGYA+PPP+DP+MY AAAYGAYPV
Sbjct: 344 VRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPTMY---AAAYGAYPV 400
Query: 181 YGSHQQQVS 189
YG+HQQQVS
Sbjct: 401 YGNHQQQVS 409
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 105
++ N TI+VG L + + L F+ GE+AS+K+ K G GFV+F + AE
Sbjct: 80 NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139
Query: 106 EALHKLNGTVI--GKQSVRLSW 125
+ L G ++ Q RL+W
Sbjct: 140 KVLQGYAGVLMPNTDQPFRLNW 161
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +V+D L + F+ +Y + + K+ KG GFV+F
Sbjct: 167 GDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRF 226
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 227 GDENERSQAMTEMNGVYCSSRPMRI 251
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 171/189 (90%), Gaps = 5/189 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-YASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+YCSSRPMRIGAATPRKSSGYQQQ+SSQGG Y++NG QG QSEGDS+NTTIF
Sbjct: 236 MTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIF 295
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVTDEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR +AEEAL KLNGTVIGKQ
Sbjct: 296 VGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQ 355
Query: 120 SVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 179
+VRLSWGRNPANKQFR D+GNQW+GAYYGG +YDGYGY + P+DPSMY AAYGAY
Sbjct: 356 TVRLSWGRNPANKQFR-DFGNQWNGAYYGGHIYDGYGYGLASPHDPSMY---HAAYGAYT 411
Query: 180 VYGSHQQQV 188
VYG+HQQQV
Sbjct: 412 VYGNHQQQV 420
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S N TI+VG L + + L FS GEI+S+K+ + +G GFV+F + AE+
Sbjct: 81 SENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEK 140
Query: 107 ALHKLNGTVI--GKQSVRLSW 125
L +G + +Q+ RL+W
Sbjct: 141 VLQNYSGMFMPSTEQTFRLNW 161
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +VTD L + FS ++ + + K+ + KG GFV+F
Sbjct: 167 GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRF 226
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 227 GDDNERSQAMTEMNGIYCSSRPMRI 251
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/189 (83%), Positives = 168/189 (88%), Gaps = 7/189 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ GGY SNGA QG QS+GDSSN TIFV
Sbjct: 248 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ----GGYGSNGASSQGFQSDGDSSNATIFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+QPFSQYGEI SVKIPV KGCGFVQFANR NAEEAL KLNGTVIGKQ+
Sbjct: 304 GGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCGFVQFANRNNAEEALQKLNGTVIGKQT 363
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNP +KQ RAD+ + W+GAYYGGQVYDGYGYA+PPP+DPS Y AAAYGAYP+
Sbjct: 364 VRLSWGRNPGHKQHRADFSSPWNGAYYGGQVYDGYGYALPPPHDPSTY---AAAYGAYPM 420
Query: 181 YGSHQQQVS 189
YG+HQQQVS
Sbjct: 421 YGNHQQQVS 429
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRE 102
S GD N TI +G L + + L F+ GEIAS+K+ + +G GFV+F
Sbjct: 91 SSGD--NKTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHA 148
Query: 103 NAEEALHKLNGTVI--GKQSVRLSW 125
AE+ L G ++ +Q RL+W
Sbjct: 149 TAEKVLQNYGGILMPNTEQPFRLNW 173
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + ++ + +IFVG L +VTD L++ F S+Y + S K+ KG GFV+F
Sbjct: 179 GDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRF 238
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 239 GDDTERTQAMTEMNGVYCSSRPMRI 263
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/189 (78%), Positives = 161/189 (85%), Gaps = 12/189 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+QQ G SNG Q SE DS+NTTIFV
Sbjct: 225 MTQMNGVYCSSRPMRIGAATPRKSSGHQQ------GGLSNGTANQ---SEADSTNTTIFV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT IGKQ+
Sbjct: 276 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQT 335
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQFR D+G+ W+GAYYG +YDGYGYA+PP +DPS+Y AAAYGAYP+
Sbjct: 336 VRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPSIY---AAAYGAYPL 392
Query: 181 YGSHQQQVS 189
YG HQQQVS
Sbjct: 393 YGGHQQQVS 401
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
Y QY++Q P Q+ N TI++G L + + L + F+ GEI+S+K
Sbjct: 52 YHHQYAAQ--------PQHQHQNGSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIK 103
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+ + +G GFV+F + AE+ L G ++ +Q RL+W
Sbjct: 104 VIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNAEQPFRLNW 150
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTD L + F S Y + + K+ KG GFV+F + +A
Sbjct: 165 DLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQA 224
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG + +R+
Sbjct: 225 MTQMNGVYCSSRPMRI 240
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/189 (78%), Positives = 160/189 (84%), Gaps = 12/189 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+QQ G SNG Q SE DS+NTTIFV
Sbjct: 249 MTQMNGVYCSSRPMRIGAATPRKSSGHQQ------GGQSNGTANQ---SEADSTNTTIFV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT IGKQ+
Sbjct: 300 GGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQT 359
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQFR D+GN W+GAYYG +YDGYGYA+ P +DPS+Y AAAYGAYP+
Sbjct: 360 VRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIY---AAAYGAYPL 416
Query: 181 YGSHQQQVS 189
YG HQQQVS
Sbjct: 417 YGGHQQQVS 425
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N TI++G L + + L + F+ GEI+S+K+ + +G GFV+F + AE+ L
Sbjct: 96 NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVL 155
Query: 109 HKLNGTVI--GKQSVRLSW 125
G ++ +Q RL+W
Sbjct: 156 QNYAGILMPNTEQPFRLNW 174
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTD L + F S Y + + K+ KG GFV+F + +A
Sbjct: 189 DLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQA 248
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG + +R+
Sbjct: 249 MTQMNGVYCSSRPMRI 264
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 290 bits (741), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/189 (80%), Positives = 163/189 (86%), Gaps = 1/189 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY SNG P QG Q + DS+NTTIFV
Sbjct: 269 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-SNGGPAQGSQPDADSTNTTIFV 327
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+DEDLRQPF QYGEI SVKIPV + QFANR +AEEAL KLNGT IGKQ+
Sbjct: 328 GGLDPNVSDEDLRQPFVQYGEIVSVKIPVEERVWVWQFANRNDAEEALQKLNGTFIGKQT 387
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRL WGRNPANKQ R D+GNQW+G YYGG YDGYGYA PP +DP MYAAAAAAYGAYP+
Sbjct: 388 VRLFWGRNPANKQSRGDFGNQWTGPYYGGHFYDGYGYAFPPQHDPGMYAAAAAAYGAYPI 447
Query: 181 YGSHQQQVS 189
YG+HQQQVS
Sbjct: 448 YGTHQQQVS 456
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + + S+ +IFVG L +VTD L + F ++Y + + K+ KG GFV+F
Sbjct: 200 GDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPSVKAAKVVFDANTGRSKGYGFVRF 259
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 260 GDDNERSQAMTEMNGVYCSSRPMRI 284
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 57 TIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALH 109
TI+VG L N DED LR F+ E+AS+K+ K G GFV+F AE+ L
Sbjct: 118 TIWVGDL-LNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 110 KLNGTVI--GKQSVRLSW 125
+ + Q RL+W
Sbjct: 177 TYSCMTMPNVDQPFRLNW 194
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/189 (79%), Positives = 160/189 (84%), Gaps = 11/189 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRK+SGYQQ G SNG Q SE DS+NTTIFV
Sbjct: 232 MTEMNGVYCSSRPMRIGAATPRKTSGYQQ------GSQSNGTSSQ---SEADSTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT EDL+QPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT IGKQ
Sbjct: 283 GGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQM 342
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+PANKQFRAD+GN WSGAYYGG VYDGYGYA+PPP DPS+YAAAA AYP+
Sbjct: 343 VRLSWGRSPANKQFRADFGNAWSGAYYGGPVYDGYGYALPPPYDPSIYAAAAYG--AYPI 400
Query: 181 YGSHQQQVS 189
YG +QQQVS
Sbjct: 401 YGGYQQQVS 409
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+ N T++VG L + + L + F+ GEI+S+K+ + +G GFV+F + A++
Sbjct: 77 AENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADK 136
Query: 107 ALHKLNGTVI--GKQSVRLSW 125
L G ++ +Q RL+W
Sbjct: 137 VLQNYAGILMPNTEQPFRLNW 157
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + + + +IFVG L +VTD L + F+ +Y + + K+ KG GFV+F
Sbjct: 163 GDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRF 222
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 223 GDDNERSQAMTEMNGVYCSSRPMRI 247
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 285 bits (728), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 147/193 (76%), Positives = 157/193 (81%), Gaps = 16/193 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIGAATPRK+SGYQQ G SNG Q SE DS+NTTIFV
Sbjct: 230 MTEMNGVYCSSRPMRIGAATPRKTSGYQQ------GSQSNGISSQ---SEADSTNTTIFV 280
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR----ENAEEALHKLNGTVI 116
GGLD NVT EDL+QPFSQYGEI SVKIPVGKGCGF +R +NAEEAL KLNGT I
Sbjct: 281 GGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTICNSRSPGPKNAEEALQKLNGTTI 340
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 176
GKQ VRLSWGRNPANKQFRAD+GN WSGAYYGG VYDGYGYA+PP +DPS+Y AAAYG
Sbjct: 341 GKQMVRLSWGRNPANKQFRADFGNAWSGAYYGGPVYDGYGYALPPSHDPSIY---AAAYG 397
Query: 177 AYPVYGSHQQQVS 189
AYP+YG HQQQVS
Sbjct: 398 AYPIYGGHQQQVS 410
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + + + +IFVG L +VTD L + FS +Y + + K+ KG GFV
Sbjct: 159 GTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFV 218
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL 123
+F + + +A+ ++NG + +R+
Sbjct: 219 RFGDDDERSQAMTEMNGVYCSSRPMRI 245
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+ N T++VG L + + L + F+ GEI+S+K+ + +G GFV+F + AE+
Sbjct: 75 AENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEK 134
Query: 107 ALHKLNGTVI--GKQSVRLSW 125
L G ++ +Q RL+W
Sbjct: 135 VLQNYAGILMPNTEQPFRLNW 155
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 281 bits (719), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/190 (80%), Positives = 171/190 (90%), Gaps = 5/190 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCSSRPMRIGAATP+KSSGYQQQYSSQG YASNG+ G QS+GD +NTTIF+
Sbjct: 244 MTEMNGIYCSSRPMRIGAATPKKSSGYQQQYSSQG-YASNGSFSHGHQSDGDFTNTTIFI 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVTDEDL+Q FSQ+GEI SVKIPVGKGCGF+QFANR+NAEEAL KLNGTVIGKQ+
Sbjct: 303 GGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQT 362
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPND-PSMYAAAAAAYGAYP 179
VRLSWGR+P NKQ+R DYGN WSGAYYGGQVY GYGYA+P P D P+MY AAAYGAYP
Sbjct: 363 VRLSWGRSPTNKQYRGDYGNHWSGAYYGGQVYGGYGYALPLPYDPPTMY---AAAYGAYP 419
Query: 180 VYGSHQQQVS 189
+YG+HQQQV+
Sbjct: 420 MYGTHQQQVN 429
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S N TI+VG L + + L F+ GEI+S+K+ + +G GFV+F + AE+
Sbjct: 89 SENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEK 148
Query: 107 ALHKLNGTVI--GKQSVRLSWG 126
L + ++ +Q+ RL+W
Sbjct: 149 VLQNYSSILMPNTEQAFRLNWA 170
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQF 98
G + + S+ +IFVG L +VTD L + F S+Y + + K+ KG GFV+F
Sbjct: 175 GDKRSENGSDLSIFVGDLAADVTDSVLHETFASKYSSVKAAKVVYDPNTGCSKGYGFVRF 234
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 235 GDDNERSQAMTEMNGIYCSSRPMRI 259
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 272 bits (695), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 154/190 (81%), Gaps = 16/190 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EMNGV+CSSR MRIGAATPRKSSGYQQ G SNG P Q S+ DS+NTTIFV
Sbjct: 246 LNEMNGVFCSSRAMRIGAATPRKSSGYQQ------GGQSNGTPSQ---SDTDSTNTTIFV 296
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+ T EDLRQPFSQYGEI SVKIPVGKGCGFVQFANR NAEEAL KLNGT +GKQ+
Sbjct: 297 GGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQT 356
Query: 121 VRLSWGRNPANKQFRADYGNQWSG-AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 179
VRLSWGRNPANKQFR+++G+ W+G AYYGG YDGYGYA+P P D SMYAA AYP
Sbjct: 357 VRLSWGRNPANKQFRSEFGSPWNGPAYYGGPAYDGYGYAMPHPYDQSMYAA------AYP 410
Query: 180 VYGSHQQQVS 189
+YG HQQQVS
Sbjct: 411 MYGGHQQQVS 420
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEE 106
+ N T++VG L + + L + F+ GEI S+K+ K G GFV+F + AE+
Sbjct: 90 ADNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEK 149
Query: 107 ALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
L G ++ +Q RL+W R+D
Sbjct: 150 VLQTYAGMLMPNTEQPFRLNWATFSTGDHKRSD 182
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTD L + FS +Y + + K+ KG GFV+F + +A
Sbjct: 186 DLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKA 245
Query: 108 LHKLNGTVIGKQSVRL 123
L+++NG +++R+
Sbjct: 246 LNEMNGVFCSSRAMRI 261
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/190 (72%), Positives = 152/190 (80%), Gaps = 14/190 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNGVYCSSRPMRIGAATPRKSSG+Q GG + G QSE DS+NTTIFV
Sbjct: 249 MTQMNGVYCSSRPMRIGAATPRKSSGHQP-----GGQTN----GTSSQSEADSTNTTIFV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NVTDEDL+Q FSQYGEIASVKIPVGKGCGFVQFANR NAEEAL KLNGT+IGKQ+
Sbjct: 300 GGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQT 359
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPP-NDPSMYAAAAAAYGAYP 179
VRLSWGRNPA KQFR D G+ W+G Y+ +YDGYGYA+P P +DPSMY AYG YP
Sbjct: 360 VRLSWGRNPAYKQFRLDVGS-WAGPYFPSPIYDGYGYAMPSPHHDPSMY---PLAYGGYP 415
Query: 180 VYGSHQQQVS 189
+YG H QQVS
Sbjct: 416 IYGGHSQQVS 425
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N T+++G L + + L + F+ GEI SVK+ + +G GF +F + AE+ L
Sbjct: 96 NKTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVL 155
Query: 109 HKLNGTVI--GKQSVRLSW 125
G ++ Q+ RL+W
Sbjct: 156 QNYAGILMPNADQAFRLNW 174
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQF 98
G + + ++ +IFVG L +VTD L + FS Y + + K+ KG GFV+F
Sbjct: 180 GDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRF 239
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 240 GDESERSQAMTQMNGVYCSSRPMRI 264
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/189 (72%), Positives = 150/189 (79%), Gaps = 12/189 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY +GA +SEGD+ NTTIFV
Sbjct: 258 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQ----GGYMPSGA---FTRSEGDTINTTIFV 310
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTDEDL+QPFS++GEI SVKIPVGKGCGFVQF NR NAEEAL KLNGTVIGKQ+
Sbjct: 311 GGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 370
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQ R YGNQW YYGGQ Y+GYGY +P P DP MY AA YP+
Sbjct: 371 VRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPRMYPAAP----YYPM 425
Query: 181 YGSHQQQVS 189
YG HQQQVS
Sbjct: 426 YGGHQQQVS 434
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 193 ENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 252
Query: 103 NAEEALHKLNGTVIGKQSVRL 123
+A+ ++NG +++R+
Sbjct: 253 ERTKAMTEMNGVKCSSRAMRI 273
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS--QYGEIASVKIPVGK------GCGF 95
G Q+ + N TI+VG L + + L F+ + EI S+K+ K G GF
Sbjct: 91 GNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGF 150
Query: 96 VQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
V+F + + A++ L + NG + Q RL+W
Sbjct: 151 VEFESHDVADKVLQEFNGAPMPNTDQPFRLNW 182
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 147/189 (77%), Gaps = 12/189 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY NG + EGD NTTIFV
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQQ----GGYMPNGTLTR---PEGDIMNTTIFV 308
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTDEDL+QPF+++GEI SVKIPVGKGCGFVQF NR NAEEAL KLNGTVIGKQ+
Sbjct: 309 GGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQT 368
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQ R YGNQW YYGGQ Y+GYGY +P P DP MY AA YP+
Sbjct: 369 VRLSWGRNPANKQPRDKYGNQWVDPYYGGQFYNGYGYMVPQP-DPRMYPAAP----YYPM 423
Query: 181 YGSHQQQVS 189
YG HQQQVS
Sbjct: 424 YGGHQQQVS 432
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 103 NAEEALHKLNGTVIGKQSVRL 123
+A+ ++NG +++R+
Sbjct: 251 ERTKAMTEMNGVKCSSRAMRI 271
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS--QYGEIASVKIP------VGKGCGF 95
G Q+ + N TI+VG L + + L F+ EI SVK+ + +G GF
Sbjct: 89 GNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGF 148
Query: 96 VQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
V+F + + A++ L + NGT + Q RL+W
Sbjct: 149 VEFESHDVADKVLREFNGTTMPNTDQPFRLNW 180
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 150/179 (83%), Gaps = 5/179 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCSSRPMRIG ATP+K S YQQQYSSQ GG+ASNG QG QS+GDS+N
Sbjct: 231 ITEMNGAYCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGTMAQGSQSDGDSNN 290
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGG+D +VTDEDLRQPFSQ+GE+ SVK+P GKGC FVQFANR+NAE+AL LNGT
Sbjct: 291 TTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTT 350
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
IGKQ+VRLSWGR PANKQ+R D+GNQW GAY+GGQ Y GYGYA+PP DP MY AAAA+
Sbjct: 351 IGKQTVRLSWGRTPANKQWRGDHGNQWHGAYFGGQGYAGYGYAMPPNQDPGMYVAAAAS 409
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVKI K G GFV+F + AE+ L
Sbjct: 81 TVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAAEKVLQS 140
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
+G+++ Q RL+W + RAD G+ S
Sbjct: 141 YSGSMMPNTDQPFRLNWASFAGER--RADAGSDLS 173
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKG 92
N A G + S+ +IFVG L +VTD L++ F ++Y + K+ KG
Sbjct: 156 NWASFAGERRADAGSDLSIFVGDLAADVTDAMLQETFATKYASVKGAKVVADSNTGRSKG 215
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
GFV+F + A+ ++NG + +R+
Sbjct: 216 YGFVRFGDENEKTRAITEMNGAYCSSRPMRI 246
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/179 (74%), Positives = 150/179 (83%), Gaps = 5/179 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG +CSSRPMRIG ATP+K S YQQQYSSQ GG+ASNGA QG QS+GDS+N
Sbjct: 216 MMEMNGAFCSSRPMRIGVATPKKPSAYQQQYSSQALVLAGGHASNGAMAQGSQSDGDSNN 275
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVGKGC FVQFANR+NAE+AL LNGT
Sbjct: 276 TTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTT 335
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
IGKQ+VRLSWGR PANKQ+R D+GNQW G Y+GGQ Y GYGYA+PP DP MY AAAA+
Sbjct: 336 IGKQTVRLSWGRTPANKQWRGDHGNQWHGGYFGGQGYAGYGYAMPPNQDPGMYVAAAAS 394
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI+VG L + + L FS GE++SVKI K G GFV+F +R AE+ L
Sbjct: 66 TIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKVLQS 125
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
+G+++ +Q RL+W + RAD G+ S
Sbjct: 126 YSGSMMPNTEQPFRLNWASFAGER--RADPGSDLS 158
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F+ +Y + K+ + KG GFV+F +
Sbjct: 155 SDLSIFVGDLAADVTDSMLQETFAGKYPSVKGAKVVIDSNTGRSKGYGFVRFGDENEKTR 214
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 215 AMMEMNGAFCSSRPMRI 231
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 150/182 (82%), Gaps = 6/182 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 161 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 220
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFANR +AE+AL +LNGTV
Sbjct: 221 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 280
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
IGKQ+VRLSWGRNPA+KQ+R D NQW+GAYYGGQ Y G P NDP+MY AAAA Y
Sbjct: 281 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGYGYAMPQNDPNMY-AAAATY 339
Query: 176 GA 177
GA
Sbjct: 340 GA 341
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + D LR F GE++S+KI K G GFV+F +R AE+ LH
Sbjct: 10 TLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKILHS 69
Query: 111 LNGTVI--GKQSVRLSW 125
NGT++ +Q RL+W
Sbjct: 70 YNGTLMPNTEQPFRLNW 86
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 100 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 159
Query: 107 ALHKLNGTVIGKQSVRL 123
A++++NG + +R+
Sbjct: 160 AMNEMNGIYCSSRPMRI 176
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 150/182 (82%), Gaps = 6/182 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 235 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFANR +AE+AL +LNGTV
Sbjct: 295 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 354
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
IGKQ+VRLSWGRNPA+KQ+R D NQW+GAYYGGQ Y G P NDP+MY AAAA Y
Sbjct: 355 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGYGYAMPQNDPNMY-AAAATY 413
Query: 176 GA 177
GA
Sbjct: 414 GA 415
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEI--ASVKIPVGK------GCGFVQFANRENAEEAL 108
T++VG L + D LR F GE+ +S+KI K G GFV+F +R AE+ L
Sbjct: 82 TLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKIL 141
Query: 109 HKLNGTVI--GKQSVRLSW 125
H NGT++ +Q RL+W
Sbjct: 142 HSYNGTLMPNTEQPFRLNW 160
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 174 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 233
Query: 107 ALHKLNGTVIGKQSVRL 123
A++++NG + +R+
Sbjct: 234 AMNEMNGIYCSSRPMRI 250
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 145/189 (76%), Gaps = 2/189 (1%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCSSR MRIG ATP+K S QQYSSQGG+ASNGA Q Q++ D SNTT+FV
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSA-MQQYSSQGGHASNGAATQTSQTDSDLSNTTVFV 295
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTDE+LRQ FSQ+G + SVKIP GKGCGFVQF+ R AE+A+ KLNGTVIG Q+
Sbjct: 296 GGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQT 355
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNPANKQFR D G+QW+G YYG Q Y GYGY D SMY A AA +
Sbjct: 356 VRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQD-SMYGAGAAHGASSNG 414
Query: 181 YGSHQQQVS 189
YG+H+Q VS
Sbjct: 415 YGNHEQSVS 423
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENA 104
G N TI++G L + + L F+Q GE+ SVK+ K GF++F E A
Sbjct: 74 GSEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAA 133
Query: 105 EEALHKLNGTVI--GKQSVRLSWGRNPANKQFRADYG 139
E+ L NGT++ +Q RL+W ++ RAD G
Sbjct: 134 EKVLQSYNGTMMPNAEQPFRLNWSAFSTGEK-RADVG 169
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANREN 103
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 104 AEEALHKLNGTVIGKQSVRL 123
A+ ++NG +++R+
Sbjct: 233 RSRAMTEMNGIYCSSRAMRI 252
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/182 (74%), Positives = 150/182 (82%), Gaps = 6/182 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNG+YCSSRPMRIG ATP+K+SGYQQQYSSQ GG ASNGA QG Q+ GDS+N
Sbjct: 253 MNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN 312
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDEDLRQ FSQ+GE+ SVKIPVGKGCGFVQFANR +AE+AL +LNGTV
Sbjct: 313 TTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTV 372
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
IGKQ+VRLSWGRNPA+KQ+R D NQW+GAYYGGQ Y G P NDP+MY AAAA Y
Sbjct: 373 IGKQTVRLSWGRNPASKQWRNDSNNQWNGAYYGGQGYGGGYGYAMPQNDPNMY-AAAATY 431
Query: 176 GA 177
GA
Sbjct: 432 GA 433
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F ++Y + K+ KG GFV+F +
Sbjct: 192 SDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSR 251
Query: 107 ALHKLNGTVIGKQSVRL 123
A++++NG + +R+
Sbjct: 252 AMNEMNGIYCSSRPMRI 268
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/194 (65%), Positives = 149/194 (76%), Gaps = 6/194 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S QQQYSSQ GGYASNGA G QS+GD+SN
Sbjct: 290 MTEMNGVYCSSRAMRIGVATPKKPSA-QQQYSSQAVILSGGYASNGAATHGSQSDGDASN 348
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 349 TTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 408
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
IGKQ+VRLSWGR+PANKQ RAD G+QW+G Y G Q Y GYGY D MYA AA
Sbjct: 409 IGKQAVRLSWGRSPANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYG 468
Query: 176 GAYPVYGSHQQQVS 189
+ YG+HQQ VS
Sbjct: 469 ASSNGYGNHQQPVS 482
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 137 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 196
Query: 109 HKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NGT++ +Q RL+W ++ RA+ G+ +S
Sbjct: 197 QSYNGTMMPNAEQPFRLNWAGFSTGEK-RAETGSDFS 232
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 229 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 288
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG +++R+
Sbjct: 289 AMTEMNGVYCSSRAMRI 305
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/194 (64%), Positives = 147/194 (75%), Gaps = 6/194 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S ++Q YSSQ GGYASNGA G QS+GDSSN
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSAHEQ-YSSQAVILSGGYASNGAATHGSQSDGDSSN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 295 TTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 354
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
IGKQ+VRLSWGR+PANKQ R D G+QW+G Y G Q Y GYGY D MYA AA
Sbjct: 355 IGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYG 414
Query: 176 GAYPVYGSHQQQVS 189
+ YG+HQQ VS
Sbjct: 415 ASSNRYGNHQQPVS 428
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 83 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 142
Query: 109 HKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NGT++ +Q RL+W ++ RA+ G+ +S
Sbjct: 143 QSYNGTMMPNTEQPFRLNWAGFSTGEK-RAETGSDFS 178
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG +++R+
Sbjct: 235 AMTEMNGVYCSSRAMRI 251
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 142/177 (80%), Gaps = 9/177 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSRPMRIG ATP+K+ GYQQQYSSQ GG+A+NGA QG SEGD +N
Sbjct: 254 MTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQGSHSEGDLNN 313
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVGKGCGFVQFA+R+NAEEA+H LNGTV
Sbjct: 314 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTV 373
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAA 172
IGKQ+VRLSWGR+P NK +R+D +G Y+GGQ Y G+G+A+ D +M A A
Sbjct: 374 IGKQTVRLSWGRSPGNKHWRSDS----NGGYFGGQSYGGHGFAVRQNQDIAMQPATA 426
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ S K+ K G GFV+F +R AE+ L
Sbjct: 102 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVLQN 161
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NGT++ Q+ RL+W A ++ +D
Sbjct: 162 YNGTMMPNTDQAFRLNWATFSAGERRSSD 190
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+S +S+ +IFVG L +VTD L++ F+ +Y I K+ + KG GFV+F +
Sbjct: 187 RSSDATSDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGD 246
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 247 ENERTRAMTEMNGVYCSSRPMRI 269
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/179 (70%), Positives = 151/179 (84%), Gaps = 5/179 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
M EMNGVYCSSRPMRIG ATP+KS YQQQYSSQ GG+A NG+ QG QS+GDS+N
Sbjct: 257 MMEMNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQSDGDSNN 316
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGG+D +++DEDLRQPFSQ+GE+ SVKIP GKGCGFVQFA+R++AE+AL LNGT
Sbjct: 317 TTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTT 376
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
IGKQ+VRLSWGR+PANKQ+R D+ NQW+GAY+GGQ Y GYGYA+ P D +MY AAAA+
Sbjct: 377 IGKQTVRLSWGRSPANKQWRGDHNNQWNGAYFGGQGYGGYGYAMAPNQDQNMYVAAAAS 435
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI+VG L + + L FS GE+ SVK+ K G GF++F + AE+ L
Sbjct: 107 TIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQN 166
Query: 111 LNGTVI--GKQSVRLSW 125
NG+++ Q RL+W
Sbjct: 167 YNGSMMPNADQPFRLNW 183
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------ 89
+ N A G + S+ +IFVG L +VTD L++ FS +Y + K+
Sbjct: 179 FRLNWASFAGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGR 238
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
KG GFV+F + A+ ++NG + +R+
Sbjct: 239 SKGYGFVRFGDENERSRAMMEMNGVYCSSRPMRI 272
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 136 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 183
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 184 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 243
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 244 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 300
Query: 179 PVYGSHQQQVS 189
P YG +QQQVS
Sbjct: 301 PFYG-NQQQVS 310
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 74 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 133
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 134 HAMTEMNGVYCSTRPMRI 151
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 142 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 189
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 190 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 249
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 250 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 306
Query: 179 PVYGSHQQQVS 189
P YG +QQQVS
Sbjct: 307 PFYG-NQQQVS 316
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 80 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 139
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 140 HAMTEMNGVYCSTRPMRI 157
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 171 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 219 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 278
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 279 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 335
Query: 179 PVYGSHQQQVS 189
P YG +QQQVS
Sbjct: 336 PFYG-NQQQVS 345
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 109 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 168
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 169 HAMTEMNGVYCSTRPMRI 186
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 108
N TI+VG L + + L F GE+ ++K+ K G GFV+F + AE+ L
Sbjct: 18 NKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVL 77
Query: 109 HKLNGTVI--GKQSVRLSW 125
G ++ Q R++W
Sbjct: 78 EGFAGHIMPNTDQPFRINW 96
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 145/191 (75%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 267 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 314
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 315 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 374
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D G+QW +G YY Y GYGY P P DP MY AAAYGAY
Sbjct: 375 VRLSWGRNPANKQLRSDNGSQWNNGMYYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 431
Query: 179 PVYGSHQQQVS 189
P YG +QQQVS
Sbjct: 432 PFYG-NQQQVS 441
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+F +
Sbjct: 205 ASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKT 264
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 265 HAMTEMNGVYCSTRPMRI 282
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P+ G N TI+VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 106 PRGGGQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 165
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
AE+ L G ++ Q R++W
Sbjct: 166 HAAAEKVLEGFAGHIMPNTDQPFRINW 192
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 141/193 (73%), Gaps = 5/193 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ----GGYASNGAPGQGPQSEGDSSNT 56
MTEMNG+YCSSR MRIG ATP+K S QQ + GG+ASNGA Q Q++ D SNT
Sbjct: 237 MTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAATQTSQTDSDLSNT 296
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T+FVGGLD VTDE+LRQ FSQ+G + SVKIP GKGCGFVQF+ R AE+A+ KLNGTVI
Sbjct: 297 TVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVI 356
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 176
G Q+VRLSWGRNPANKQFR D G+QW+G YYG Q Y GYGY D SMY A AA
Sbjct: 357 GAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQD-SMYGAGAAHGA 415
Query: 177 AYPVYGSHQQQVS 189
+ YG+H+Q VS
Sbjct: 416 SSNGYGNHEQSVS 428
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L F+Q GE+ SVK+ K GF++F E AE+ L
Sbjct: 78 NRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVL 137
Query: 109 HKLNGTVI--GKQSVRLSWGRNPANKQFRADYG 139
NGT++ +Q RL+W + ++ RAD G
Sbjct: 138 QSYNGTMMPNAEQPFRLNWSAFSSGEK-RADVG 169
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANREN 103
G S+ +IFVG L +VTD LR F S+Y + K+ + KG GFV+F +
Sbjct: 173 GSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESE 232
Query: 104 AEEALHKLNGTVIGKQSVRL 123
A+ ++NG +++R+
Sbjct: 233 RSRAMTEMNGIYCSSRAMRI 252
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 145/191 (75%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRK+SG ++G G +S+GD +NTT+FV
Sbjct: 203 MTEMNGVYCSTRPMRIGPATPRKTSG------------TSGPTGSAARSDGDLTNTTVFV 250
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 251 GGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQT 310
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D G+QW +G +Y Y GYGY P P DP MY AAAYGAY
Sbjct: 311 VRLSWGRNPANKQLRSDNGSQWNNGMFYAASPFYSGYGYPAPFPADPGMY---AAAYGAY 367
Query: 179 PVYGSHQQQVS 189
P YG +QQQVS
Sbjct: 368 PFYG-NQQQVS 377
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQ 97
G + +S+ +IFVG L +V D L + FS+ Y + K+ + KG GFV+
Sbjct: 133 MGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVR 192
Query: 98 FANRENAEEALHKLNGTVIGKQSVRL 123
F + A+ ++NG + +R+
Sbjct: 193 FGDDNEKTHAMTEMNGVYCSTRPMRI 218
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/195 (67%), Positives = 150/195 (76%), Gaps = 8/195 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSR MRIG ATP+K S QQQYSSQ GGYASNGA G QS+GD+SN
Sbjct: 236 MTEMNGVYCSSRAMRIGVATPKKPSA-QQQYSSQAVILSGGYASNGAATHGSQSDGDASN 294
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 295 TTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 354
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
IGKQ+VRLSWGR ANKQ RAD G+QW+G Y G Q Y GYGY D MYA AAAY
Sbjct: 355 IGKQAVRLSWGR-TANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAAY 413
Query: 176 GAYPV-YGSHQQQVS 189
GA YG+HQQ VS
Sbjct: 414 GASSNGYGNHQQPVS 428
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FSQ GE+ SVKI K GFV+F AE+ L
Sbjct: 83 NKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 142
Query: 109 HKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NGT++ +Q RL+W ++ RA+ G+ +S
Sbjct: 143 QSYNGTMMPNAEQPFRLNWAGFSTGEK-RAETGSDFS 178
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S+Y + K+ V KG GFV+F +
Sbjct: 175 SDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSR 234
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG +++R+
Sbjct: 235 AMTEMNGVYCSSRAMRI 251
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 142/191 (74%), Gaps = 17/191 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRKSSG S +S+GD +NTT+FV
Sbjct: 256 MTEMNGVYCSTRPMRIGPATPRKSSGNSGSTGSSA------------RSDGDLTNTTVFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DLRQ FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 304 GGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQT 363
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYGGQ-VYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D GNQW +G YY Y+GYGY P DP MY AAAYGAY
Sbjct: 364 VRLSWGRNPANKQLRSDNGNQWNNGMYYAASPFYNGYGYPAAPFPDPGMY--TAAAYGAY 421
Query: 179 PVYGSHQQQVS 189
P YG +QQQVS
Sbjct: 422 PFYG-NQQQVS 431
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 194 ASDHSIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 253
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGVYCSTRPMRI 271
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ K G GFV+F + A
Sbjct: 99 GQEENKTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAA 158
Query: 105 EEALHKLNGTVI--GKQSVRLSW 125
E+ L G ++ Q R++W
Sbjct: 159 EKVLDGFAGHIMPNTDQPFRINW 181
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 143/191 (74%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRIG ATPRKSSG S +S+GD +NTT+FV
Sbjct: 305 MTEMNGVYCSTRPMRIGPATPRKSSGTSGSTGSSA------------RSDGDLTNTTVFV 352
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV+++DL+Q FSQYGEI+SVKIPVGK CGFVQF R+NAE+AL LNG+ IGKQ+
Sbjct: 353 GGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQT 412
Query: 121 VRLSWGRNPANKQFRADYGNQW-SGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGRNPANKQ R+D GNQW +G YY Y+GYGY P DP MY AAAYGAY
Sbjct: 413 VRLSWGRNPANKQLRSDNGNQWNNGMYYAPSPFYNGYGYPAAPFPDPGMY---AAAYGAY 469
Query: 179 PVYGSHQQQVS 189
P+YG +QQQVS
Sbjct: 470 PLYG-NQQQVS 479
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 243 ASDHSIFVGDLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 302
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 303 NAMTEMNGVYCSTRPMRI 320
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ K G GFV+F + A
Sbjct: 148 GQEENKTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAA 207
Query: 105 EEALHKLNGTVI--GKQSVRLSW 125
E+ L G ++ Q R++W
Sbjct: 208 EKVLDGFAGHIMPNTDQPFRINW 230
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 126/143 (88%), Gaps = 4/143 (2%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
QSE DS+NTTIFVGGLDPNVTDEDLRQ FSQYGEI SVK+PVGKGCGFVQFA R NAEEA
Sbjct: 3 QSEADSTNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEEA 62
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRADY-GNQWSGAYYGGQVYDGYGYAIPPPNDPS 166
L KLNGTVIGKQ+VRLSWGRNPANKQFR D+ GN WSG YYG VYDGYGYA+PPP+DPS
Sbjct: 63 LQKLNGTVIGKQTVRLSWGRNPANKQFRMDFGGNHWSGTYYGAPVYDGYGYALPPPHDPS 122
Query: 167 MYAAAAAAYGAYPVYGSHQQQVS 189
+YAAA A AYP+YG HQQQV+
Sbjct: 123 IYAAAYA---AYPIYGGHQQQVN 142
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 144/193 (74%), Gaps = 18/193 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 142 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 191 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQN 250
Query: 121 VRLSWGRNPANKQFRADYGNQWS--GAYYGG-QVYDGYGY-AIPPPNDPSMYAAAAAAYG 176
VRLSWGRNPANKQFR D GNQW+ G YY Y+GYGY A P DP MY AA AYG
Sbjct: 251 VRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMY--AAPAYG 308
Query: 177 AYPVYGSHQQQVS 189
AYP YG +QQQVS
Sbjct: 309 AYPFYG-NQQQVS 320
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + +S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F
Sbjct: 73 GDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRF 132
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 133 GDDSEKTQAMTEMNGVYCSSRPMRI 157
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 144/193 (74%), Gaps = 18/193 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 258 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 306
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 307 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQN 366
Query: 121 VRLSWGRNPANKQFRADYGNQWS--GAYYGG-QVYDGYGY-AIPPPNDPSMYAAAAAAYG 176
VRLSWGRNPANKQFR D GNQW+ G YY Y+GYGY A P DP MY AA AYG
Sbjct: 367 VRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMY--AAPAYG 424
Query: 177 AYPVYGSHQQQVS 189
AYP YG+ QQQVS
Sbjct: 425 AYPFYGN-QQQVS 436
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 196 ASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 255
Query: 106 EALHKLNGTVIGKQSVRL 123
+A+ ++NG + +R+
Sbjct: 256 QAMTEMNGVYCSSRPMRI 273
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P G N +++VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 97 PHQPGQEENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 156
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
AE+ L +G ++ Q RL+W
Sbjct: 157 HAAAEKVLEGFSGHIMPNTDQPFRLNW 183
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 136/176 (77%), Gaps = 11/176 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRI AATPRKS+G Q QYS + G + G+ QG S+ D +NTTIFV
Sbjct: 244 MTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRAG--NGGSHAQGFPSDNDLNNTTIFV 301
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGFVQF NR +AEEAL +L+GTVI +Q+
Sbjct: 302 GRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQT 361
Query: 121 VRLSWGRNPANKQFRADYG-------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 169
VRLSWGR+PANKQ G NQW+GAYY GQ Y+ YGYA PPP DP+MYA
Sbjct: 362 VRLSWGRSPANKQQPQPQGQQPQSDPNQWNGAYY-GQGYESYGYA-PPPQDPAMYA 415
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG LD +V+D L++ F S+Y + + K+ + KG GFV+F A+
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 246 EMNGVYCSTRPMRIS 260
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQS + T++VG L + + L FS GE+ S KI K G GF++F
Sbjct: 85 PQSSDEVK--TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFIT 142
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
R AE+ + NGT++ +Q R++W
Sbjct: 143 RTAAEKIMQTYNGTLMPNTEQVFRMNW 169
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 144/193 (74%), Gaps = 18/193 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S S+G GD +NTT+FV
Sbjct: 255 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAA--RSDG---------GDLTNTTVFV 303
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++EDLRQ FSQYGEI+SVKIP+GK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 304 GGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQN 363
Query: 121 VRLSWGRNPANKQFRADYGNQWS--GAYYGG-QVYDGYGY-AIPPPNDPSMYAAAAAAYG 176
VRLSWGRNPANKQFR D GNQW+ G YY Y+GYGY A P DP MY AA AYG
Sbjct: 364 VRLSWGRNPANKQFRGDNGNQWNNGGMYYAAPPFYNGYGYPAAAPFPDPGMY--AAPAYG 421
Query: 177 AYPVYGSHQQQVS 189
AYP YG+ QQQVS
Sbjct: 422 AYPFYGN-QQQVS 433
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQF 98
G + +S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F
Sbjct: 186 GDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRF 245
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 246 GDDSEKTQAMTEMNGVYCSSRPMRI 270
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P G N +++VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 94 PHQPGQEENKSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 153
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
AE+ L +G ++ Q RL+W
Sbjct: 154 HAAAEKVLEGFSGHIMPNTDQPFRLNW 180
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 136/176 (77%), Gaps = 12/176 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RPMRI AATPRKS+G Q QYS +G + G+ QG S+ D +NTTIFV
Sbjct: 244 MTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRG---NGGSHAQGFPSDNDLNNTTIFV 300
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPN TDEDLRQ F QYGE+ SVKIPVGKGCGFVQF NR +AEEAL +L+GTVI +Q+
Sbjct: 301 GRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQT 360
Query: 121 VRLSWGRNPANKQFRADYG-------NQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 169
VRLSWGR+PANKQ G NQW+GAYY GQ Y+ YGYA PPP DP+MYA
Sbjct: 361 VRLSWGRSPANKQQPQPQGQQPQSDPNQWNGAYY-GQGYESYGYA-PPPQDPAMYA 414
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG LD +V+D L++ F S+Y + + K+ + KG GFV+F A+
Sbjct: 186 SIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEESERARAMT 245
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPND 164
++NG + +R+S A + A +Q+SG GG G+ P ND
Sbjct: 246 EMNGVYCSTRPMRIS----AATPRKSAGVQHQYSGRGNGGSHAQGF----PSDND 292
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQS + T++VG L + + L FS GE+ S KI K G GF++F
Sbjct: 85 PQSSDEVK--TLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFIT 142
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
R AE+ + NGT++ +Q R++W
Sbjct: 143 RTAAEKIMQTYNGTLMPNTEQVFRMNW 169
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 122/142 (85%), Gaps = 5/142 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNGVYCSSRPMRIG ATP+K+ G+QQQYSSQ GG+++NGA QG SEGD +N
Sbjct: 253 MTEMNGVYCSSRPMRIGVATPKKTYGFQQQYSSQAVVLAGGHSANGAVAQGSHSEGDINN 312
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD + +DEDLRQPF Q+GE+ SVKIPVGKGCGFVQFA+R+NAEEA+ LNGTV
Sbjct: 313 TTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTV 372
Query: 116 IGKQSVRLSWGRNPANKQFRAD 137
IGKQ+VRLSWGR+P NK +R+D
Sbjct: 373 IGKQTVRLSWGRSPGNKHWRSD 394
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ S K+ K G GFV+F +R AE+ L
Sbjct: 101 TVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVLQN 160
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NGT++ Q+ RL+W A ++ +D
Sbjct: 161 YNGTMMPNTDQAFRLNWATFSAGERRSSD 189
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+S +S+ +IFVG L +VTD L+ F+ +Y I K+ + KG GFV+F +
Sbjct: 186 RSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGD 245
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 246 ENERTRAMTEMNGVYCSSRPMRI 268
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/189 (70%), Positives = 146/189 (77%), Gaps = 9/189 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQQ GGY NGA + EGD+ NTTIFV
Sbjct: 264 MTEMNGVKCSSRAMRIGPATPRKTTGYQQQ----GGYMPNGALTR---PEGDTLNTTIFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VTD+DLRQPFS++GEI SVKIPVGKGCGFVQF NR +AEEAL KLNGTVIGKQ+
Sbjct: 317 GGLDSSVTDDDLRQPFSEFGEIVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQT 376
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRN ANKQ R YGNQW YYGGQ Y+GYGY +P P DP MY A G +
Sbjct: 377 VRLSWGRNQANKQPRDKYGNQWVAPYYGGQYYNGYGYMVPQP-DPRMYPATPYGGGYR-M 434
Query: 181 YGSHQQQVS 189
YG HQQQVS
Sbjct: 435 YGGHQQQVS 443
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 199 ENNGPDLSIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDEN 258
Query: 103 NAEEALHKLNGTVIGKQSVRL 123
+A+ ++NG +++R+
Sbjct: 259 ERTKAMTEMNGVKCSSRAMRI 279
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASV 85
Y Q S + S G Q+ + N TI+VG L + + L F S GEI V
Sbjct: 79 YHQYPSHHLHHQSRGNNNNKHQNASNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIV 138
Query: 86 KIPV--------GKGCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 126
+ V +G GFV+F + + A++ L + NGT + +Q RL+W
Sbjct: 139 SVKVIRNKHNGLSEGYGFVEFDSHDVADKVLQEFNGTTMPDTEQPFRLNWA 189
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 221 bits (564), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/155 (69%), Positives = 127/155 (81%), Gaps = 8/155 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
MTEMNG+YCSSRPMR+G ATP+K S QQQ+SSQ GGYASNG+ G QS+GDSSN
Sbjct: 185 MTEMNGIYCSSRPMRVGVATPKKPSA-QQQFSSQAVILSGGYASNGSATHGSQSDGDSSN 243
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD +VTDE+LRQ F+Q+GE+ SVKIP GKGCGFVQF++R +A+EA+ KL+G +
Sbjct: 244 TTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAI 303
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 150
IGKQ+VRLSWGR+PANKQ R D GN G YYG Q
Sbjct: 304 IGKQAVRLSWGRSPANKQMRTDSGN--GGGYYGRQ 336
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC------GFVQFANRENAEEAL 108
N TI++G L + + L FS GE+ SVKI K GFV+F AE+ L
Sbjct: 32 NKTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVL 91
Query: 109 HKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NGT++ +Q RL+W A ++ RA+ G+ +S
Sbjct: 92 QSYNGTMMPNAEQPFRLNWAAFSAGEK-RAETGSDFS 127
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD LR F S++ + K+ V KG GFV+F +
Sbjct: 124 SDFSIFVGDLASDVTDTMLRDTFASRFPSVKGAKVVVDANTGHSKGYGFVRFGDESERSR 183
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 184 AMTEMNGIYCSSRPMRV 200
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 218 bits (555), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 136/180 (75%), Gaps = 6/180 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNG+YCSSRPMRIG ATP+K+SGYQQ Y+SQ + G P QG QS+ +S+NT
Sbjct: 252 MTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNT 311
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLD +V+DEDL+Q FS++G++ SVKIP+GKGCGFVQFANR+NAE+A+ LNGTVI
Sbjct: 312 TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVI 371
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
GKQ+VRLSWGR+ NKQ+R D NQW+ G Y++P DP+M+ AAAA
Sbjct: 372 GKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNMHPTAAAA 431
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 47 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
P+ +G + T+++G L P + + L F+ GE++SVK+ K G GFV+F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 100 NRENAEEALHKLNGTVIGKQSV--RLSWGRNPANKQFRADYGNQWS 143
+ AE+ L NGT++ + RL+W AN + R D G+ S
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDR-RPDTGSDLS 194
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ FS +Y + K+ + KG GFV+F +
Sbjct: 191 SDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTR 250
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 251 AMTEMNGIYCSSRPMRI 267
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 136/180 (75%), Gaps = 6/180 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNG+YCSSRPMRIG ATP+K+SGYQQ Y+SQ + G P QG QS+ +S+NT
Sbjct: 251 MTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSDSESNNT 310
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLD +V+DEDL+Q FS++G++ SVKIP+GKGCGFVQFANR+NAE+A+ LNGTVI
Sbjct: 311 TIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVI 370
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
GKQ+VRLSWGR+ NKQ+R D NQW+ G Y++P DP+M+ AAAA
Sbjct: 371 GKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSVPQHQDPNMHPTAAAA 430
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 47 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
P+ +G + T+++G L P + + L F+ GE++SVK+ K G GFV+F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 100 NRENAEEALHKLNGTVIGKQSV--RLSWGRNPANKQFRADYGNQWS 143
+ AE+ L NGT++ + RL+W AN + R D G+ S
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDR-RPDTGSDLS 194
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F S+Y + K+ + KG GF +F +
Sbjct: 191 SDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENERTR 249
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 250 AMTEMNGIYCSSRPMRI 266
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 133/181 (73%), Gaps = 16/181 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNG----APGQGPQSEGDSSNT 56
MTEMNGVYC SRPMRI ATP+KS G QQ YS +G Y + GQG QS+ D +NT
Sbjct: 204 MTEMNGVYCCSRPMRINEATPKKSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNNT 263
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLDPN TDEDLRQ F +GEI VKIPVGKGCGFVQF NR +AEEAL KL+GT+I
Sbjct: 264 TIFVGGLDPNATDEDLRQVFGPFGEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTII 323
Query: 117 GKQSVRLSWGRNPANKQFRADYG-------NQWS--GAYYG-GQVYDGYGYAIPPPNDPS 166
G+QS+RLSWGR+PANKQ A +G NQW+ GAYY GQ Y+ YGYA PP DP+
Sbjct: 324 GQQSIRLSWGRSPANKQ-TASWGVQPQPDPNQWNGGGAYYSYGQGYEAYGYA-PPAQDPT 381
Query: 167 M 167
M
Sbjct: 382 M 382
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P V D L++ F S+Y + S K+ + KG GFV+F + A+
Sbjct: 146 SIFVGDLGPEVIDILLQETFQSRYSSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMT 205
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R++
Sbjct: 206 EMNGVYCCSRPMRIN 220
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA-SVKIPVGK------GCGF 95
P G GD T ++VG L + + L+ FS GE+ SVKI K G GF
Sbjct: 39 PFHGELQSGDEIKT-LWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGF 97
Query: 96 VQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
V+ +R +AE L L+GT + RL+W
Sbjct: 98 VELDSRASAERILQTLHGTPMPNSPHPFRLNW 129
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 215 bits (547), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 119/143 (83%), Gaps = 6/143 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPGQGPQSEGDSS 54
MTEMNGVYCSSRPMR+G ATP+K+ G QQYSSQ GG SNGA QG QSEGDS+
Sbjct: 273 MTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSN 332
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTTIFVGGLD +++DEDLRQPF Q+G++ SVKIPVGKGCGFVQ A+R+NAEEA+ LNGT
Sbjct: 333 NTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT 392
Query: 115 VIGKQSVRLSWGRNPANKQFRAD 137
VIGKQ+VRLSWGR+P NK +R D
Sbjct: 393 VIGKQTVRLSWGRSPGNKHWRND 415
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI++G L + + L F+ GE+AS K+ K G GFV+F R AE+ L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 111 LNGTVI--GKQSVRLSW 125
NGT++ Q+ RL+W
Sbjct: 177 FNGTMMPNTDQAFRLNW 193
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ +++ +++ G G+ SE +S+ ++FVG L +VTD L++ F
Sbjct: 179 GTMMPNTDQAFRLNWAT---FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETF 234
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
S++ I K+ + KG GFV+F + A+ ++NG + +R+
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRV 288
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 139/195 (71%), Gaps = 20/195 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S GD +NTT+FV
Sbjct: 244 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSAR-----------PDGGDLTNTTVFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 293 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQA 352
Query: 121 VRLSWGRNPANKQFRADYGN-QWS--GAYYGGQVY--DGYGY-AIPPPNDPSMYAAAAAA 174
VRLSWGRNPANKQFR D GN QW G YY + GYGY A P DP MY AA A
Sbjct: 353 VRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPDPGMY--AAPA 410
Query: 175 YGAYPVYGSHQQQVS 189
YGAYP YG +QQQVS
Sbjct: 411 YGAYPFYG-NQQQVS 424
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
P G N TI+VG L + + L F GE+ ++K+ K G GFV+F +
Sbjct: 83 PHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYS 142
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
AE L +G ++ Q RL+W
Sbjct: 143 HAAAERVLEGFSGHIMPNTDQPFRLNW 169
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 182 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 241
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 242 HAMTEMNGVYCSSRPMRI 259
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 139/195 (71%), Gaps = 20/195 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S GD +NTT+FV
Sbjct: 142 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA-----------RPDGGDLTNTTVFV 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 191 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQA 250
Query: 121 VRLSWGRNPANKQFRADYGN-QWS--GAYYGGQVY--DGYGY-AIPPPNDPSMYAAAAAA 174
VRLSWGRNPANKQFR D GN QW G YY + GYGY A P DP MY AA A
Sbjct: 251 VRLSWGRNPANKQFRGDNGNMQWKNGGVYYAAPPFYNGGYGYPAAAPFPDPGMY--AAPA 308
Query: 175 YGAYPVYGSHQQQVS 189
YGAYP YG +QQQVS
Sbjct: 309 YGAYPFYG-NQQQVS 322
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 80 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 139
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 140 HAMTEMNGVYCSSRPMRI 157
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 118/143 (82%), Gaps = 6/143 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ------GGYASNGAPGQGPQSEGDSS 54
MTEMNGVYCSSRPMR+G ATP+K+ G QQYSSQ GG SNGA QG QSEGDS+
Sbjct: 273 MTEMNGVYCSSRPMRVGVATPKKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSN 332
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTTIFVGGLD +++DEDLRQPF Q+G++ SVKIPVGKGCGFVQ A+R+NAEEA+ LNGT
Sbjct: 333 NTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGT 392
Query: 115 VIGKQSVRLSWGRNPANKQFRAD 137
VIGKQ+VRLSWGR+P NK R D
Sbjct: 393 VIGKQTVRLSWGRSPGNKHGRND 415
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
TI++G L + + L F+ GE+AS K+ K G GFV+F R AE+ L
Sbjct: 117 TIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQN 176
Query: 111 LNGTVI--GKQSVRLSW 125
NGT++ Q+ RL+W
Sbjct: 177 FNGTMMPNTDQAFRLNW 193
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ +++ +++ G G+ SE +S+ ++FVG L +VTD L++ F
Sbjct: 179 GTMMPNTDQAFRLNWAT---FSAAGGGGERRSSEA-TSDLSVFVGDLAIDVTDAMLQETF 234
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
S++ I K+ + KG GFV+F + A+ ++NG + +R+
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRV 288
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 144/189 (76%), Gaps = 18/189 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+RIG ATPR++SG S +P + QS+GD +N T++V
Sbjct: 251 MTEMNGVYCSTRPIRIGPATPRRTSG-----------DSGSSPPR--QSDGDLTNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL L+G+ IGKQ+
Sbjct: 298 GGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFVNRADAEEALQALSGSTIGKQA 357
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+MY AAAYGAYP
Sbjct: 358 VRLSWGRSPASKQPRGDSGHRRNGMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPF 413
Query: 181 YGSHQQQVS 189
YG+ QQ VS
Sbjct: 414 YGN-QQLVS 421
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTD+ L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDRT 248
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 249 HAMTEMNGVYCSTRPIRI 266
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 100 TIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQN 159
Query: 111 LNGTVI--GKQSVRLSW 125
G V+ ++ +L+W
Sbjct: 160 FAGHVMPNTDRAFKLNW 176
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 125/151 (82%), Gaps = 6/151 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+R++AE+A+ LNGTV
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAY 146
IGK +VRLSWGR+P NKQ+R D G QW+G Y
Sbjct: 381 IGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY 410
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 108 LHKLNGTVIGKQSVRL 123
L ++NG + +R+
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 111 LNGTVI--GKQSVRLSW 125
+G+V+ Q R++W
Sbjct: 169 YSGSVMPNSDQPFRINW 185
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 125/151 (82%), Gaps = 6/151 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 218 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 277
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+R++AE+A+ LNGTV
Sbjct: 278 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 337
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAY 146
IGK +VRLSWGR+P NKQ+R D G QW+G Y
Sbjct: 338 IGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY 367
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 158 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 217
Query: 108 LHKLNGTVIGKQSVRL 123
L ++NG + +R+
Sbjct: 218 LTEMNGAYCSNRQMRV 233
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 66 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 125
Query: 111 LNGTVI--GKQSVRLSW 125
+G+V+ Q R++W
Sbjct: 126 YSGSVMPNSDQPFRINW 142
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 123/151 (81%), Gaps = 6/151 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ +NG+ G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+D +VTDEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA R++AE+A+ LNGTV
Sbjct: 321 ATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNGTV 380
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAY 146
IGK +VRLSWGR+P NKQ+R D G QW+G Y
Sbjct: 381 IGKNTVRLSWGRSP-NKQWRGDSGQQWNGGY 410
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L + F +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 108 LHKLNGTVIGKQSVRL 123
L ++NG + +R+
Sbjct: 261 LTEMNGAYCSNRQMRV 276
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GF++F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQN 168
Query: 111 LNGTVI--GKQSVRLSW 125
+G+++ Q R++W
Sbjct: 169 YSGSLMPNSDQPFRINW 185
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 209 bits (531), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 131/168 (77%), Gaps = 5/168 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++++ Y QQ SQ + G G G S+G+S+N+TIFV
Sbjct: 277 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFV 336
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VT+EDL QPFSQ+GE+ SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +
Sbjct: 337 GGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNT 396
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 168
VRLSWGR+P NKQ+R+D GNQW+G Y GQ Y+ GYA D +MY
Sbjct: 397 VRLSWGRSP-NKQWRSDTGNQWNGGYSRGQGYNN-GYA---NQDSNMY 439
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 125 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 184
Query: 111 LNGTVI--GKQSVRLSW 125
+G + +Q RL+W
Sbjct: 185 FSGVTMPNAEQPFRLNW 201
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 217 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 276
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG + +R+
Sbjct: 277 MTEMNGAFCSSRQMRV 292
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 130/168 (77%), Gaps = 5/168 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CSSR MR+G ATP++++ Y QQ SQ + G G G S+G+S+N+TIFV
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFV 331
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQFANR++AEEA+ LNGTVIGK +
Sbjct: 332 GGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNT 391
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 168
VRLSWGR+P NKQ+R+D GNQW+G Y GQ Y+ GYA D +MY
Sbjct: 392 VRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNN-GYA---NQDSNMY 434
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 111 LNGTVI--GKQSVRLSW 125
+G + +Q RL+W
Sbjct: 180 FSGVTMPNAEQPFRLNW 196
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG + +R+
Sbjct: 272 MTEMNGAFCSSRQMRV 287
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 141/185 (76%), Gaps = 17/185 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 203 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 249
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 250 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 309
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+P++KQ RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 310 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 365
Query: 181 YGSHQ 185
YGS Q
Sbjct: 366 YGSQQ 370
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 141 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 200
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 201 HAMTEMNGAYCSTRPIRI 218
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 141/185 (76%), Gaps = 17/185 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 256 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 362
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+P++KQ RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 363 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 418
Query: 181 YGSHQ 185
YGS Q
Sbjct: 419 YGSQQ 423
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 194 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 253
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGAYCSTRPIRI 271
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ + G GFV+F + +A
Sbjct: 99 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 158
Query: 105 EEALHKLNGTVI--GKQSVRLSW 125
E+AL G V+ + +L+W
Sbjct: 159 EKALQNFTGHVMPNTDRPFKLNW 181
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 141/185 (76%), Gaps = 17/185 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 256 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 362
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+P++KQ RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 363 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 418
Query: 181 YGSHQ 185
YGS Q
Sbjct: 419 YGSQQ 423
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 194 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 253
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGAYCSTRPIRI 271
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ + G GFV+F + +A
Sbjct: 99 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 158
Query: 105 EEALHKLNGTVI--GKQSVRLSW 125
E+AL G V+ + +L+W
Sbjct: 159 EKALQNFTGHVMPNTDRPFKLNW 181
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 145/189 (76%), Gaps = 18/189 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 253 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 299
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQFA+R +AEEAL LNG++IGKQ+
Sbjct: 300 GGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGKQA 359
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+P++KQ R D GN+ + YYG Y GYGYA P P+ P+MY AAAYGAYP+
Sbjct: 360 VRLSWGRSPSHKQSRGDSGNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPM 415
Query: 181 YGSHQQQVS 189
YG +QQ VS
Sbjct: 416 YG-NQQLVS 423
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 191 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 250
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 251 HAMSEMNGVYCSTRPIRI 268
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 88 PAAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFV 147
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+F + +AE+AL G V+ ++ +L+W
Sbjct: 148 EFFSHASAEKALQNFTGHVMPNTDRAFKLNW 178
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 144/189 (76%), Gaps = 18/189 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + PG S+GDS+N T++V
Sbjct: 217 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSTNRTVYV 263
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VIGKQ+
Sbjct: 264 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQA 323
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+P++KQ RAD G++ + YYG Y GYGYA P P+ P+MY AAAYGAYPV
Sbjct: 324 VRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGAYPV 379
Query: 181 YGSHQQQVS 189
YGS QQ VS
Sbjct: 380 YGS-QQLVS 387
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + F+ +Y + K+ + +G GFV+F + +
Sbjct: 155 ASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 214
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 215 HAMTEMNGAYCSTRPIRI 232
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ + G GFV+F + +A
Sbjct: 60 GCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSA 119
Query: 105 EEALHKLNGTVI--GKQSVRLSW 125
E+AL G V+ + +L+W
Sbjct: 120 EKALQNFTGHVMPNTDRPFKLNW 142
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 134/199 (67%), Gaps = 21/199 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSN 55
M+EMNGVYCS+RPMRI AATP+K+ G QQQYS G A P ++ D++N
Sbjct: 172 MSEMNGVYCSTRPMRISAATPKKTIGVQQQYSL--GKAMYPVPAYTTSVPVLPADYDANN 229
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF R +AEEA+ K+ G +
Sbjct: 230 TTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKI 289
Query: 116 IGKQSVRLSWGRNPANKQFRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYA 169
IG+Q VR SWGRNPA KQ +G NQWS AYYG G YD YGY + DPS+Y
Sbjct: 290 IGQQVVRTSWGRNPAAKQDLTTWGQQVDPNQWS-AYYGYGGTYDAYGYGV--VQDPSLY- 345
Query: 170 AAAAAYGAYPVYGSHQQQV 188
YGAY Y S+ QQV
Sbjct: 346 ----GYGAYSGYASYPQQV 360
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+FA+ A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMS 173
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 174 EMNGVYCSTRPMRIS 188
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 81 YNGTQMPGTEQTFRLNWA 98
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 116/138 (84%), Gaps = 6/138 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-----GGYASNGAPGQGPQSEGDSSN 55
+TEMNG YCS+R MR+G ATP+++ QQQ+SSQ GG+ SNG+ G G QS+G+S+N
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTN 320
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TIFVGG+DP+V DEDLRQPFSQ+GE+ SVKIPVGKGCGFVQFA+R++AE+A+ LNGTV
Sbjct: 321 ATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTV 380
Query: 116 IGKQSVRLSWGRNPANKQ 133
IGK +VRLSWGR+P NKQ
Sbjct: 381 IGKNTVRLSWGRSP-NKQ 397
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ ++FVG L P+VTD L + FS +Y + S K+ + KG GFV+F + A
Sbjct: 201 DLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRA 260
Query: 108 LHKLNGTVIGKQSVRLSWG---RNPANKQ 133
L ++NG + +R+ R AN+Q
Sbjct: 261 LTEMNGAYCSNRQMRVGIATPKRAIANQQ 289
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE++SVK+ K G GFV+F +R AEE L
Sbjct: 109 TLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQN 168
Query: 111 LNGTVI--GKQSVRLSW 125
+G+V+ Q R++W
Sbjct: 169 YSGSVMPNSDQPFRINW 185
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 133/191 (69%), Gaps = 28/191 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG--------------------GYA-- 38
MTEMNG +CSSR MR+G ATP++++ Y QQ SQG G A
Sbjct: 272 MTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQGLITCLDALNIASEVNCNVFIGLALT 331
Query: 39 -SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
+ G G G S+G+S+N+TIFVGGLD +VT+EDL QPFS +GE+ SVKIPVGKGCGFVQ
Sbjct: 332 LAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQ 391
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGY 157
FANR++AEEA+ LNGTVIGK +VRLSWGR+P NKQ+R+D GNQW+G Y GQ Y+ GY
Sbjct: 392 FANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYSRGQGYNN-GY 449
Query: 158 AIPPPNDPSMY 168
A D +MY
Sbjct: 450 A---NQDSNMY 457
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS E++SVK+ K G GFV+F +R AEEAL
Sbjct: 120 TLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQS 179
Query: 111 LNGTVI--GKQSVRLSW 125
+G + +Q RL+W
Sbjct: 180 FSGVTMPNAEQPFRLNW 196
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+V+D L + F+ +Y + K+ + KG GFV+F + A
Sbjct: 212 DLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRA 271
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG + +R+
Sbjct: 272 MTEMNGAFCSSRQMRV 287
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 130/179 (72%), Gaps = 16/179 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG++CSSRPMR G AT +K++G+QQ Y A+ P Q S+ D +NTTIFV
Sbjct: 231 MTEMNGMFCSSRPMRTGPATTKKTTGFQQPYPK----AAAAVPPQVVASDNDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF NR +AEEAL L+GTV+G+Q+
Sbjct: 287 GGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQA 346
Query: 121 VRLSWGRNPANKQFRADYG--------NQWSG-AYYG-GQVYD-GYGYAIPPPNDPSMY 168
+RLSWGR+PANKQ + NQW+G AYYG GQ YD GYGYA P P DP+MY
Sbjct: 347 IRLSWGRSPANKQVQTPGWVQPQQPDPNQWNGAAYYGYGQGYDAGYGYA-PQPQDPNMY 404
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ +++ G P GP + IFVG L +VTD L++ F
Sbjct: 142 GAQMPNTEQFYRLNWATFG--IGEKRPEMGP-------DYPIFVGDLASDVTDYLLQETF 192
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
S+Y + K+ KG GFV+F + A+ ++NG + +R
Sbjct: 193 RSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTEMNGMFCSSRPMR 245
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + ++ F E+ SVKI K G GFV+FA+ AE L
Sbjct: 80 TLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQN 139
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + +Q RL+W
Sbjct: 140 HNGAQMPNTEQFYRLNWA 157
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 136/189 (71%), Gaps = 15/189 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG++CSSRPMR G AT +K++G+QQ Y A+ P Q S+ D +NTTIFV
Sbjct: 231 MTEMNGMFCSSRPMRTGPATTKKTTGFQQPYPKA---AAAAVPPQVVASDNDPNNTTIFV 287
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE LRQ F Q+GE+ VKIPVGK CGFVQF NR +AEEAL L+GTV+G+Q+
Sbjct: 288 GGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGTVLGQQA 347
Query: 121 VRLSWGRNPANKQFRA--------DYGNQWSG-AYYG-GQVYD-GYGYAIPPPNDPSMYA 169
+RLSWGR+PANKQ + NQW+G AYYG GQ YD GYGYA P P DP+MY+
Sbjct: 348 IRLSWGRSPANKQVQTPGWVQPQQPDPNQWNGAAYYGYGQGYDAGYGYA-PQPQDPNMYS 406
Query: 170 AAAAAYGAY 178
A AYG Y
Sbjct: 407 YAPYAYGNY 415
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHK 110
IFVG L +VTD L++ F S+Y + K+ KG GFV+F + A+ +
Sbjct: 174 IFVGDLASDVTDYLLQETFRSRYQTVKGAKVVSDRVTGRSKGYGFVRFGDENEQVRAMTE 233
Query: 111 LNGTVIGKQSVR 122
+NG + +R
Sbjct: 234 MNGMFCSSRPMR 245
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + ++ F E+ SVKI K G GFV+FA+ AE L
Sbjct: 80 TLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHAGAERFLQN 139
Query: 111 LNGTVI--GKQSVRLSW 125
NG + +Q RL+W
Sbjct: 140 HNGAQMPNTEQFYRLNW 156
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 125/187 (66%), Gaps = 32/187 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNGV C R MRIG ATPRK SGY QQ
Sbjct: 243 MLEMNGVKCCGRAMRIGPATPRKPSGYHQQ------------------------------ 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GLD +VTD+DLRQPF+ YGEI SVKIPVGKGCGF+QF NRENAEEAL KLNG++IGKQ+
Sbjct: 273 -GLDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQFVNRENAEEALEKLNGSMIGKQT 331
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGRNP NKQ R +Y +QW YYGGQ Y+GYGY +PPP DP MYAAA G YPV
Sbjct: 332 VRLSWGRNPGNKQPRGEYADQWVEPYYGGQYYNGYGYMMPPPVDPRMYAAAPYG-GGYPV 390
Query: 181 YGSHQQQ 187
Y HQQQ
Sbjct: 391 YSGHQQQ 397
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANR 101
Q+ ++ N TI+VG L + + L FS GEI+SVK+ K G GFV+F +
Sbjct: 83 QNASNTENKTIWVGDLLHWMDENYLNSSFSSAGEISSVKVIRNKHTGLTEGYGFVEFVSH 142
Query: 102 ENAEEALHKLNGTVI--GKQSVRLSW 125
+ AE+ L +LNG + +Q RL+W
Sbjct: 143 DVAEKVLQELNGEAMLNAEQPFRLNW 168
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P VTD L Q FS+ Y + + K+ + KG GFV+F + +A
Sbjct: 183 DLSIFVGDLAPEVTDTMLEQIFSEKYPSVKNAKVVIDGNTGRSKGYGFVRFGDDSERSKA 242
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG +++R+
Sbjct: 243 MLEMNGVKCCGRAMRI 258
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 137/199 (68%), Gaps = 19/199 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAPGQGPQSEGDSSNTT 57
MTEMN VYCS+RPMRI AATP+KS+G+QQQY+ + Y A + P Q QS+ D +NTT
Sbjct: 1 MTEMNNVYCSTRPMRISAATPKKSAGFQQQYTPKVAYQTPAYSAPPAQVFQSD-DQNNTT 59
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
IFVGGLDP V+DEDLRQ F Q+GE+ VKIPV KGCGFVQF NR AEEAL +++GTVIG
Sbjct: 60 IFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGTVIG 119
Query: 118 KQSVRLSWGRNPANK--------QFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 169
+Q+VRLSWGR+PA K Q +AD NQW+GAYYG P DPS Y
Sbjct: 120 QQTVRLSWGRSPATKQDQPAGWGQAQAD-ANQWNGAYYGYGQGYDAYGYA-APQDPSTY- 176
Query: 170 AAAAAYGAYPVYGSHQQQV 188
YGAYP G++QQQ
Sbjct: 177 ----GYGAYPSSGNYQQQT 191
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 144/189 (76%), Gaps = 16/189 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+RIG ATPR+++G + + PG S+GDS+N T++V
Sbjct: 256 MTEMNGVYCSTRPIRIGPATPRRTAGD----------SGSSTPGH---SDGDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQ+ NR +AEEAL LNG+VIGKQ+
Sbjct: 303 GGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGKQA 362
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSWGR+P++KQ R D GN+ + YYG Y GYGYA P P+ P+M AAAAAYGAYP
Sbjct: 363 VRLSWGRSPSHKQPRGDSGNRRNNMYYGTPFYGGYGYASPVPH-PNM-YAAAAAYGAYPF 420
Query: 181 YGSHQQQVS 189
YG +QQ VS
Sbjct: 421 YG-NQQLVS 428
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTDE L + F S+Y + K+ + +G GFV+F +
Sbjct: 195 SDHSIFVGDLAADVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGEDSDKSR 254
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 255 AMTEMNGVYCSTRPIRI 271
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 91 PAAGSGGNACEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFV 150
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+F + +A++AL G + + +L+W
Sbjct: 151 EFYSHASADKALQNFTGHAMPNTDRPFKLNW 181
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 133/193 (68%), Gaps = 16/193 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R +AEEA+ ++ GTV
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAA 174
IG+ VR+SWGR+P KQ AD +QWS AYYG GQ YD Y Y DPS+Y A
Sbjct: 313 IGQLVVRISWGRSPTAKQ--AD-PSQWSSAYYGYGQGYDAYPYG--ATQDPSLY-----A 362
Query: 175 YGAYPVYGSHQQQ 187
YGAY Y + QQ
Sbjct: 363 YGAYAGYLQYPQQ 375
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 102 YNGTQMPGTEQTFRLNWA 119
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 195 EMNGVYCSTRPMRIS 209
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 130/192 (67%), Gaps = 15/192 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG---YASNGAPGQGPQSEGDSSNTT 57
MTEMNGV+CS+RPMRI AATP+K++ YQQQY++ + AP Q ++ D +NTT
Sbjct: 174 MTEMNGVFCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADNDITNTT 233
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
IFVG LDPNVT+E+LR F Q+GEI VKIPVG+GCGFVQFA R +AEEA+ ++ G VIG
Sbjct: 234 IFVGNLDPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIG 293
Query: 118 KQSVRLSWGRNPANKQFRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYG 176
+Q VR+SWGR A D QWS AYYG GQ YD Y Y DPS+Y AYG
Sbjct: 294 QQPVRISWGRKQARSTLILD---QWS-AYYGYGQGYDAYAYG--ATQDPSLY-----AYG 342
Query: 177 AYPVYGSHQQQV 188
AY Y + QQV
Sbjct: 343 AYAGYPQYPQQV 354
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 23 TLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAERILQT 82
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 83 YNGTQMPGTEQTFRLNWA 100
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F + A+
Sbjct: 116 SIFVGDLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMT 175
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPND 164
++NG + +R+S ++ Y + A Y Y +P ND
Sbjct: 176 EMNGVFCSTRPMRISAATPKKTAAYQQQYAT--AKAIYPLPAYTAPVQVVPADND 228
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 134/186 (72%), Gaps = 15/186 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 332
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
+RLSWGR+P NKQ + D NQW+ YYG Q YD YGYA PP DP+MY AY AY
Sbjct: 333 IRLSWGRSPGNKQPQQDQ-NQWNAGYYGYPPQGYDPYGYAR-PPQDPAMY-----AYAAY 385
Query: 179 PVYGSH 184
P YG++
Sbjct: 386 PGYGNY 391
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 148 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+F + + A+ ++NG + +R+ N N
Sbjct: 208 KFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NG ++ G Q +L+W + A ++ R D G+ ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK-RGDDGSDYT 161
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 134/186 (72%), Gaps = 15/186 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 332
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
+RLSWGR+P NKQ + D NQW+ YYG Q YD YGY + PP DP+MY AY AY
Sbjct: 333 IRLSWGRSPGNKQPQQDQ-NQWNAGYYGYPPQGYDPYGY-VRPPQDPAMY-----AYAAY 385
Query: 179 PVYGSH 184
P YG++
Sbjct: 386 PGYGNY 391
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 148 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+F + + A+ ++NG + +R+ N N
Sbjct: 208 KFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NG ++ G Q +L+W + A ++ R D G+ ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK-RGDDGSDYT 161
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 134/186 (72%), Gaps = 15/186 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 219 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 273 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 332
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
+RLSWGR+P NKQ + D NQW+ YYG Q YD YGY + PP DP+MY AY AY
Sbjct: 333 IRLSWGRSPGNKQPQQDQ-NQWNAGYYGYPPQGYDPYGY-VRPPQDPAMY-----AYAAY 385
Query: 179 PVYGSH 184
P YG++
Sbjct: 386 PGYGNY 391
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 148 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+F + + A+ ++NG + +R+ N N
Sbjct: 208 KFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 68 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 127
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NG ++ G Q +L+W + A ++ R D G+ ++
Sbjct: 128 YNGQMMPNGNQVFKLNWATSGAGEK-RGDDGSDYT 161
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 134/186 (72%), Gaps = 15/186 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG A+ +K+ G QQQ S+ Y + QG S+ D +NTT+FV
Sbjct: 263 MTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSAT--YQNT----QGTDSDSDPNNTTVFV 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 317 GGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 376
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
+RLSWGR+P NKQ + D NQW+ YYG Q YD YGY + PP DP+MY AY AY
Sbjct: 377 IRLSWGRSPGNKQPQQDQ-NQWNAGYYGYPPQGYDPYGY-VRPPQDPAMY-----AYAAY 429
Query: 179 PVYGSH 184
P YG++
Sbjct: 430 PGYGNY 435
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F + Y + K+ KG GFV
Sbjct: 192 GAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFV 251
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+F + + A+ ++NG + +R+ N N
Sbjct: 252 KFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 286
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ S KI K G GF++F + AE+ L
Sbjct: 112 TLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQG 171
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
NG ++ G Q +L+W + A ++ R D G+ ++
Sbjct: 172 YNGQMMPNGNQVFKLNWATSGAGEK-RGDDGSDYT 205
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 127/176 (72%), Gaps = 10/176 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-----SSGY----QQQYSSQGGYASNGAPGQGPQSEG 51
MTEMNG YCS+RP+RIG ATPR +S Y + + + G Y + QS+
Sbjct: 267 MTEMNGAYCSTRPIRIGPATPRDLQPTSASAYGLVAKARANIWGEYVGDSGSSPPRQSDS 326
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
DS+N TI+VGGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL L
Sbjct: 327 DSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGL 386
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
NG+ IGKQ+VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 387 NGSTIGKQAVRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 441
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 205 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 264
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 265 HAMTEMNGAYCSTRPIRI 282
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 140/189 (74%), Gaps = 19/189 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 251 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEAL LNG++IGKQ+
Sbjct: 298 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQA 356
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSW R+P++KQ R D N+ + YYG Y GYGYA P P+ P+MY AAAYG YP+
Sbjct: 357 VRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGTYPL 412
Query: 181 YGSHQQQVS 189
YG +QQ VS
Sbjct: 413 YG-NQQLVS 420
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 248
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 249 HAMSEMNGVYCSTRPIRI 266
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 86 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 145
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+F + +AE+AL G V+ + +L+W
Sbjct: 146 EFFSHASAEKALQNFTGHVMPNTDRPFKLNW 176
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 140/189 (74%), Gaps = 19/189 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 251 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 297
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEAL LNG++IGKQ+
Sbjct: 298 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQA 356
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSW R+P++KQ R D N+ + YYG Y GYGYA P P+ P+MY AAAYG YP+
Sbjct: 357 VRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGTYPL 412
Query: 181 YGSHQQQVS 189
YG +QQ VS
Sbjct: 413 YG-NQQLVS 420
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 189 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 248
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 249 HAMSEMNGVYCSTRPIRI 266
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 86 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 145
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+F + +AE+AL G V+ + +L+W
Sbjct: 146 EFFSHASAEKALQNFTGHVMPNTDRPFKLNW 176
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 133/199 (66%), Gaps = 19/199 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA-----PGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R +AEEA+ ++ GTV
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 IGKQSVRLSWGRNPANKQ-FRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDPSMY 168
IG+ VR+SWGR+P KQ +G +QWS AYYG GQ YD Y Y DPS+Y
Sbjct: 313 IGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYG--ATQDPSLY 370
Query: 169 AAAAAAYGAYPVYGSHQQQ 187
AYGAY Y + QQ
Sbjct: 371 -----AYGAYAGYLQYPQQ 384
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 102 YNGTQMPGTEQTFRLNWA 119
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 195 EMNGVYCSTRPMRIS 209
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 133/199 (66%), Gaps = 19/199 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS-----NGAPGQGPQSEGDSSN 55
MTEMNGVYCS+RPMRI AATP+K++G+QQQY++ P Q ++ D +N
Sbjct: 193 MTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LDPNVT+E+L+Q FSQ+GE+ VKIP G+GCGFVQF R +AEEA+ ++ GTV
Sbjct: 253 TTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTV 312
Query: 116 IGKQSVRLSWGRNPANKQ-FRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDPSMY 168
IG+ VR+SWGR+P KQ +G +QWS AYYG GQ YD Y Y DPS+Y
Sbjct: 313 IGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYG--ATQDPSLY 370
Query: 169 AAAAAAYGAYPVYGSHQQQ 187
AYGAY Y + QQ
Sbjct: 371 -----AYGAYAGYLQYPQQ 384
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 42 TLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQA 101
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 102 YNGTQMPGTEQTFRLNWA 119
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+F++ A+
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 195 EMNGVYCSTRPMRIS 209
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 140/189 (74%), Gaps = 19/189 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNGVYCS+RP+RIG ATPR+SSG + PG S+GDSSN T++V
Sbjct: 200 MSEMNGVYCSTRPIRIGPATPRRSSGDSGSST----------PGH---SDGDSSNRTVYV 246
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEAL LNG++IGKQ+
Sbjct: 247 GGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQA 305
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
VRLSW R+P++KQ R D N+ + YYG Y GYGYA P P+ P+MY AAAYG YP+
Sbjct: 306 VRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYGTYPL 361
Query: 181 YGSHQQQVS 189
YG +QQ VS
Sbjct: 362 YG-NQQLVS 369
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 138 ASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKS 197
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 198 HAMSEMNGVYCSTRPIRI 215
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
P G G N TI+VG L + + L F GE+ ++K+ + G GFV
Sbjct: 35 PSSGSGGNGCEENKTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFV 94
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+F + +AE+AL G V+ + +L+W
Sbjct: 95 EFFSHASAEKALQNFTGHVMPNTDRPFKLNW 125
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 126/182 (69%), Gaps = 12/182 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 226 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+R +AEEAL LNGT++G Q+
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQN 338
Query: 121 VRLSWGRNPANKQFRADYGNQWSG--AYYGG--QVYDGYGYAIPPPNDPSMYAAAAAAYG 176
VRLSWGR+PANKQ + D NQW+G +Y+GG Q Y+ Y YA P DP+MY + A Y
Sbjct: 339 VRLSWGRSPANKQTQQD-PNQWNGSSSYFGGYAQGYENYAYAPPAGQDPNMYGSYPAGYA 397
Query: 177 AY 178
+Y
Sbjct: 398 SY 399
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 37 YASNGAPGQG----PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK- 91
+A N P Q P S D T +++G L + + L FS GE+ SVK+ K
Sbjct: 52 WAPNAQPPQQSAVPPPSSADEVKT-LWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 92 -----GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
G GF++F +R AE L NGT++ G Q+ RL+W
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNW 151
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGA 145
A+ A+ ++ G + + +R+ + +N + +A Y N GA
Sbjct: 217 ADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGA 265
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 133/195 (68%), Gaps = 18/195 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAPGQGPQSEGDSSNTT 57
MTEMNGV+CS+RPMRI ATP+K++ +QQQY+ + + AP Q ++GD +NTT
Sbjct: 172 MTEMNGVFCSTRPMRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSADGDVTNTT 231
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
IFVG LDPN T+EDLRQ F Q GEIASVKIP G+GCGFVQFA R +AEEA+ ++ G VIG
Sbjct: 232 IFVGNLDPNATEEDLRQTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIG 291
Query: 118 KQSVRLSWGRNPANKQFRADYG---NQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAA 173
+Q VR+SWG+ + A +G +QW+ AYYG GQ YD Y Y +DPS+Y
Sbjct: 292 QQPVRISWGK---KQDLTATWGQQVDQWN-AYYGYGQGYDAYAYG--GTHDPSLY----- 340
Query: 174 AYGAYPVYGSHQQQV 188
AY AY Y + QQV
Sbjct: 341 AYNAYAGYPQYPQQV 355
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMT 173
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYG 139
++NG + +R+S F+ Y
Sbjct: 174 EMNGVFCSTRPMRISMATPKKTTSFQQQYA 203
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------ 91
A+ APG Q T+++G L + L F+ GE+ S+KI K
Sbjct: 2 AAPTAPGGYHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPE 61
Query: 92 GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 126
G GFV+F + AE L NGT + +Q+ RL+W
Sbjct: 62 GYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWA 98
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 126/182 (69%), Gaps = 12/182 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 226 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+R +AEEAL LNGT++G Q+
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQN 338
Query: 121 VRLSWGRNPANKQFRADYGNQWSG--AYYGG--QVYDGYGYAIPPPNDPSMYAAAAAAYG 176
VRLSWGR+PANKQ + D NQW+G +Y+GG Q Y+ Y YA P DP+MY + A Y
Sbjct: 339 VRLSWGRSPANKQTQQD-PNQWNGSSSYFGGYAQGYENYAYAPPAGQDPNMYGSYPAGYA 397
Query: 177 AY 178
+Y
Sbjct: 398 SY 399
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FS GE+ SVK+ K G GF++F +R AE L
Sbjct: 75 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEFISRAGAERVLQT 134
Query: 111 LNGTVI--GKQSVRLSW 125
NGT++ G Q+ RL+W
Sbjct: 135 FNGTIMPNGGQNFRLNW 151
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 157 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRF 216
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGA 145
A+ A+ ++ G + + +R+ + +N + +A Y N GA
Sbjct: 217 ADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGA 265
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 126/182 (69%), Gaps = 12/182 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + +Q AS P G Q+E D +NTTIFV
Sbjct: 224 MTEMQGVLCSTRPMRIGPAS-------NKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 276
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTDE L+Q F+QYGE+ VKIP GK CGFVQFA+R +AEEAL LNGT++G Q+
Sbjct: 277 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLLGGQN 336
Query: 121 VRLSWGRNPANKQFRADYGNQWSGA--YYGG--QVYDGYGYAIPPPNDPSMYAAAAAAYG 176
VRLSWGR+PANKQ + D NQW+G+ Y+GG Q Y+ Y YA P DP+MY + A Y
Sbjct: 337 VRLSWGRSPANKQTQQD-PNQWNGSSGYFGGYAQGYENYAYAPPAGQDPNMYGSYPAGYA 395
Query: 177 AY 178
+Y
Sbjct: 396 SY 397
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FS GE+ SVK+ K G GF++F +R AE L
Sbjct: 73 TLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKLNNQSEGYGFLEFISRAGAERVLQT 132
Query: 111 LNGTVI--GKQSVRLSW 125
NGT++ G Q+ RL+W
Sbjct: 133 YNGTIMPNGGQNFRLNW 149
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQF 98
G + DS + TIFVG L +V+D L + F ++Y + K+ + KG GFV+F
Sbjct: 155 GEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRF 214
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGA 145
A+ A+ ++ G + + +R+ + +N + +A Y N GA
Sbjct: 215 ADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGA 263
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 132/208 (63%), Gaps = 28/208 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ-----------QYSSQGGYASNGAPGQGPQS 49
M+EMNGVYCSSRPMRI AATP+KS G Q ++ Y + +P P
Sbjct: 160 MSEMNGVYCSSRPMRISAATPKKSLGPAQLNPKVDAVSPVAVATYAAYGAQPSPQAFP-V 218
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ D +NTTIFVGGLDP V DEDLR F Q+GE+ VKIP GKGCGFVQF +R AEEAL
Sbjct: 219 DNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQ 278
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYG-------NQW-SGAYYGG--QVYDGYGYAI 159
+L+ TVIG Q+VRLSWGR+P NKQ AD G NQW +G YY G Q YD YGY
Sbjct: 279 RLHQTVIGTQAVRLSWGRSPGNKQ-TADPGWGQHQDPNQWNAGGYYQGYAQGYDQYGYPA 337
Query: 160 PPPNDPSMYAAAAAAYGAYPVYGSHQQQ 187
PP DP A A YG YP YG++ QQ
Sbjct: 338 QPPQDP-----AYAQYGNYPGYGNYPQQ 360
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F ++Y + K+ KG GFV+F + A+
Sbjct: 102 SIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMS 161
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 162 EMNGVYCSSRPMRIS 176
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQS + T++VG L + + L F GE+ SVKI K G GFV+F +
Sbjct: 1 PQSHEEVK--TLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVS 58
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSW 125
AE+ L NGT + +Q RL+W
Sbjct: 59 HAAAEKILQAYNGTQMPNTEQPFRLNW 85
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 130/204 (63%), Gaps = 23/204 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ--------QYSSQGGYASNGAPGQGPQSEGD 52
M+EMNG+YCSSRPMRI AATP+KS G Q ++ Y + +P P ++ D
Sbjct: 195 MSEMNGIYCSSRPMRISAATPKKSLGPNQLNPKVSPVAVATYAAYGAQPSPQAFP-TDND 253
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTTIFVGGLDP V DEDLR F Q+GE+ VKIP GKGCGFVQF +R AEEAL +L+
Sbjct: 254 PNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLH 313
Query: 113 GTVIGKQSVRLSWGRNPANKQF------RADYGNQWSGA-YYGG--QVYDGYGYAIPPPN 163
TVIG Q+VRLSWGR+P NKQ NQW+ A YY G Q YD YGY P P
Sbjct: 314 QTVIGTQAVRLSWGRSPGNKQTSDPAWGHHQDPNQWNAAGYYQGYAQGYDQYGYPAPAPQ 373
Query: 164 DPSMYAAAAAAYGAYPVYGSHQQQ 187
DP A A YG YP YG++ QQ
Sbjct: 374 DP-----AYAQYGNYPGYGNYPQQ 392
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
G Q + T++VG L + + L F GE+ SVKI K G GFV+F
Sbjct: 33 GMQPQHHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFV 92
Query: 100 NRENAEEALHKLNGTVI--GKQSVRLSW 125
+ AE+ L NGT + +Q RL+W
Sbjct: 93 SHVAAEKILQAYNGTQMPNTEQPFRLNW 120
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F ++Y + K+ KG GFV+F + A+
Sbjct: 137 SIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMS 196
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 197 EMNGIYCSSRPMRIS 211
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 126/171 (73%), Gaps = 18/171 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS DS+N T++V
Sbjct: 256 MTEMNGVYCSTRPIRVGPATPRRSQG-----------DSGTSPPR--QSHVDSTNRTVYV 302
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF NR +AEEALH LNG+ IGKQ+
Sbjct: 303 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTIGKQA 362
Query: 121 VRLSWGRNPANKQFRADYGNQ----WSGAYYGGQVYDGYGYAIPPPNDPSM 167
VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 363 VRLSWGRSPASKQSRGDSGHRRNGNCNGMYYGTPFYGGYGYASPIPH-PNM 412
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
SS+ +IFVG L +VTD L + FS +Y + K+ + +G GFV+F + +
Sbjct: 194 SSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKI 253
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 254 HAMTEMNGVYCSTRPIRV 271
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENA 104
G N TI+VG L + + L F GE+ ++K+ V +G GF++F +A
Sbjct: 99 GGEDNRTIWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSA 158
Query: 105 EEALHKLNGTVI--GKQSVRLSW 125
E+AL +G V+ ++ +L+W
Sbjct: 159 EKALQNFSGHVMPNTDRAFKLNW 181
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 123/167 (73%), Gaps = 14/167 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 89 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 135
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 136 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQA 195
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 196 VRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 241
Score = 42.7 bits (99), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 27 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 86
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 87 HAMTEMNGAYCSTRPIRI 104
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 127/186 (68%), Gaps = 13/186 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG++CS+RPMRIG A +K G QQ Q N QG Q E D +NTTIFV
Sbjct: 242 MNEMNGMFCSTRPMRIGPAATKKPVGGQQ---FQKASFQNT---QGNQGESDPNNTTIFV 295
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR AE+AL LNGT +G QS
Sbjct: 296 GGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQS 355
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
+RLSWGR+P+NKQ + D G Y Q Y+ YGYA PPP DP+MY YGAYP
Sbjct: 356 IRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA-PPPQDPNMY------YGAYPG 408
Query: 181 YGSHQQ 186
YG++QQ
Sbjct: 409 YGNYQQ 414
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ+ ++++G L P + + L FSQ GE+ SVK+ K G GF++ A
Sbjct: 81 PQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 140
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
R AE L NGT++ +Q+ RL+W A ++ RAD
Sbjct: 141 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGER-RAD 178
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 171 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 230
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL 123
+F + A++++NG + +R+
Sbjct: 231 RFGDEGEQLRAMNEMNGMFCSTRPMRI 257
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 123/167 (73%), Gaps = 14/167 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 142 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 189 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQA 248
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 249 VRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 294
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 80 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 139
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 140 HAMTEMNGAYCSTRPIRI 157
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 125/171 (73%), Gaps = 18/171 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS+ DS+N T++V
Sbjct: 261 MTEMNGVYCSTRPIRVGPATPRRSQG-----------DSGSSPPR--QSDVDSTNRTVYV 307
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF NR +AEEAL LNG IGKQ+
Sbjct: 308 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRADAEEALQGLNGATIGKQA 367
Query: 121 VRLSWGRNPANKQFRADYGNQW----SGAYYGGQVYDGYGYAIPPPNDPSM 167
VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 368 VRLSWGRSPASKQSRGDSGHRRNGNGNGMYYGTPFYSGYGYASPVPH-PNM 417
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
SS+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + +
Sbjct: 199 SSDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 258
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 259 HAMTEMNGVYCSTRPIRV 276
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEAL 108
N TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 108 NRTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKAL 167
Query: 109 HKLNGTVI--GKQSVRLSW 125
+G V+ ++ +L+W
Sbjct: 168 QNFSGHVMPNTDRAFKLNW 186
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 125/186 (67%), Gaps = 19/186 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG++CS+RPMRIG A +K G Q + QG Q E D +NTTIFV
Sbjct: 227 MNEMNGMFCSTRPMRIGPAATKKPVGASFQNT------------QGXQGESDPNNTTIFV 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR AE+AL LNGT +G QS
Sbjct: 275 GGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQS 334
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
+RLSWGR+P+NKQ + D G Y Q Y+ YGYA PPP DP+MY YGAYP
Sbjct: 335 IRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA-PPPQDPNMY------YGAYPG 387
Query: 181 YGSHQQ 186
YG++QQ
Sbjct: 388 YGNYQQ 393
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ+ ++++G L P + + FSQ GE+ SVK+ K G GF++ A
Sbjct: 66 PQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELAT 125
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
R AE L NGT++ +Q+ RL+W A ++ RAD
Sbjct: 126 RAAAERILQTYNGTLMPNSEQNFRLNWATLGAGER-RAD 163
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+ + TIFVG L +VTD L++ F Y + K+ KG GFV
Sbjct: 156 GAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFV 215
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
+F + A++++NG + +R+ + + P F+ G Q
Sbjct: 216 RFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGASFQNTQGXQ 262
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 121/162 (74%), Gaps = 15/162 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCS+RP+R+G ATPR+S G S +P + QS+ DS+N T++V
Sbjct: 245 MTEMNGVYCSTRPIRVGLATPRRSQG-----------DSGSSPPR--QSDVDSTNRTVYV 291
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP GK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 292 GGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALQGLNGSTIGKQA 351
Query: 121 VRLSWGRNPANKQFRADYGNQW--SGAYYGGQVYDGYGYAIP 160
+RLSWGR+P +KQ R DYG++ +G YYG Y GYGYA P
Sbjct: 352 IRLSWGRSPTSKQSRGDYGHRRNGNGMYYGTPFYGGYGYASP 393
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L +VTDE L + FS +Y + K+ + +G GFV+F + + A
Sbjct: 185 DHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTLA 244
Query: 108 LHKLNGTVIGKQSVRL 123
+ ++NG + +R+
Sbjct: 245 MTEMNGVYCSTRPIRV 260
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
TI+VG L + + L F GE+ ++K+ V +G GFV+F + +AE+AL
Sbjct: 94 TIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQN 153
Query: 111 LNGTVI--GKQSVRLSW 125
+G V+ +++ +L+W
Sbjct: 154 FSGHVMPNTERAFKLNW 170
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 185 bits (470), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 123/167 (73%), Gaps = 14/167 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RP+RIG ATPR+SSG + QS+ DS+N TI+V
Sbjct: 226 MTEMNGAYCSTRPIRIGPATPRRSSGDSGSSPPR-------------QSDSDSTNRTIYV 272
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPN T+++LR+ F++YG++ASVKIPVGK CGFVQF NR +AEEAL LNG+ IGKQ+
Sbjct: 273 GGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTIGKQA 332
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
VRLSWGR+PA+KQ R D G++ +G YYG Y GYGYA P P+ P+M
Sbjct: 333 VRLSWGRSPASKQSRGDSGHRRNGMYYGTPFYGGYGYASPLPH-PNM 378
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +VTDE L F++ Y + K+ + +G GFV+F + +
Sbjct: 164 ASDHSIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKT 223
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 224 HAMTEMNGAYCSTRPIRI 241
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 130/189 (68%), Gaps = 16/189 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG---APGQGPQSEGDSSNT 56
M+EMNGVYCS+RPMRI AA P+KSSG Q QY +++ Y + Q + D +NT
Sbjct: 169 MSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQTVLPDSDLTNT 228
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNVT+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GTVI
Sbjct: 229 TIFIGNLDPNVTEEELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVI 288
Query: 117 GKQSVRLSWGRNPANKQFR-ADYG-----NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 170
G+Q VRLSWGR+PANKQ + A +G NQWS Y G YD YGY P DPS
Sbjct: 289 GQQVVRLSWGRSPANKQDQSAAWGQQADPNQWSAYYSYG--YDPYGY----PQDPSYAYG 342
Query: 171 AAAAYGAYP 179
A A Y YP
Sbjct: 343 AYAGYAQYP 351
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 109 DHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRA 168
Query: 108 LHKLNGTVIGKQSVRLS 124
+ ++NG + +R+S
Sbjct: 169 MSEMNGVYCSTRPMRIS 185
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVK+ K G GF++F + E AE+ L
Sbjct: 18 TLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKVLQA 77
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + + + RL+W
Sbjct: 78 YNGAQMPGTELTFRLNWA 95
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 130/202 (64%), Gaps = 22/202 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ------QQYSSQGGYASNGAPGQGPQ--SEGD 52
M+EMNG YCS+RPMRI AATP+K + + +++ Y P ++ D
Sbjct: 172 MSEMNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYD 231
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
++NTTIFVG LDPN+T+E+L+Q F Q+GEIA VKIP GKGCGFVQF R +AEEA+ K+
Sbjct: 232 ANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQ 291
Query: 113 GTVIGKQSVRLSWGRNPANKQFRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDPS 166
G +IG+Q VR SWGRNPA KQ +G NQWS AYYG G YD YGY + DPS
Sbjct: 292 GKIIGQQVVRTSWGRNPAAKQDLTTWGQQVDPNQWS-AYYGYGGTYDAYGYGV--VQDPS 348
Query: 167 MYAAAAAAYGAYPVYGSHQQQV 188
+Y YGAY Y S+ QQV
Sbjct: 349 LY-----GYGAYSGYASYPQQV 365
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F +QY + K+ KG GFV+FA+ A+
Sbjct: 114 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMS 173
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 174 EMNGXYCSTRPMRIS 188
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F+ GE+ S+KI K G GFV+F + AE L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 81 YNGTQMPGTEQTFRLNWA 98
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 125/190 (65%), Gaps = 13/190 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GVYCS+RPMRI ATP+KS G+ + G P P ++ D SNTT+FV
Sbjct: 173 MTEMAGVYCSTRPMRISTATPKKSLAT----IPPKGFQNFGVP---PLTDNDPSNTTVFV 225
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +V DEDL+Q FSQ+G+I VKIP GK CGFVQF R +AEEAL KL+G+ IG+Q+
Sbjct: 226 GGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHGSTIGQQT 285
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP- 179
+RLSWGR+PANKQ NQW+G YYG PPP DP Y AYG +P
Sbjct: 286 IRLSWGRSPANKQQVQPEFNQWNGPYYGYGQGYECYGFAPPPQDPGAY-----AYGNFPQ 340
Query: 180 VYGSHQQQVS 189
YG++ QQVS
Sbjct: 341 AYGTYPQQVS 350
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGF 95
P QGP + +IFVG L P+VTD L++ F S+Y + K+ + KG GF
Sbjct: 108 PDQGP-------DFSIFVGDLAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGF 160
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLS 124
V+F + A+ ++ G + +R+S
Sbjct: 161 VRFGDEAEKMRAMTEMAGVYCSTRPMRIS 189
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L F+ E+ K+ K G GFV+F N AE+ L
Sbjct: 22 TLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYSEGYGFVEFTNHSTAEKVLQS 81
Query: 111 LNGTVIGKQSV--RLSWG 126
NGT + + RL+W
Sbjct: 82 FNGTQMPSTDIAFRLNWA 99
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 114/138 (82%), Gaps = 4/138 (2%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+GDS+N T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 15 HSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEA 74
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
L LNG+VIGKQ+VRLSWGR+P++KQ RAD G++ + YYG Y GYGYA P P+ P+M
Sbjct: 75 LQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNM 133
Query: 168 YAAAAAAYGAYPVYGSHQ 185
Y AAAYGAYPVYGS Q
Sbjct: 134 Y---AAAYGAYPVYGSQQ 148
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 129/185 (69%), Gaps = 14/185 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MT+MNG +CS+RPMRIG AT K++ QQY + Y ++ G+ +E D +NTTIFV
Sbjct: 240 MTDMNGAFCSTRPMRIGLAT-NKNAVTGQQYP-KASYQNSQTQGE---NENDPNNTTIFV 294
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTD++LR+ F +YG++ VKIP GK CGFVQFA+R AEEAL LNGT + QS
Sbjct: 295 GNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQFADRSCAEEALRLLNGTSLSGQS 354
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 179
+RLSWGR+P+NKQ + D NQW+ YYG Q Y+ YGYA P P DP+MY YG YP
Sbjct: 355 IRLSWGRSPSNKQPQPD-ANQWNAGYYGYAQGYENYGYA-PAPQDPNMY------YGNYP 406
Query: 180 VYGSH 184
YG++
Sbjct: 407 GYGNY 411
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ SVK+ K G GF++F + AE L
Sbjct: 90 TLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAERILQT 149
Query: 111 LNGTVI--GKQSVRLSW 125
NGT + G+Q+ RL+W
Sbjct: 150 YNGTPMPNGEQNFRLNW 166
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG----- 90
+ N A G D+ + TIFVG L +VTD L+ F Y + K+ +
Sbjct: 162 FRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGR 221
Query: 91 -KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
KG GFV+F + A+ +NG + +R+ N
Sbjct: 222 TKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATN 260
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/134 (69%), Positives = 104/134 (77%), Gaps = 11/134 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGVYCSSRPMRIG ATPRKSSG S +G GD +NTT+FV
Sbjct: 244 MTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSSA--RPDG---------GDLTNTTVFV 292
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+V++EDLRQ FSQYGEI+SVKIPVGK CGFVQFA R+NAE+AL LNG+ IGKQ+
Sbjct: 293 GGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGSTIGKQA 352
Query: 121 VRLSWGRNPANKQF 134
VRLSWGRNPANKQ
Sbjct: 353 VRLSWGRNPANKQL 366
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFA 99
P G N TI+VG L + + L F GE+ ++K+ K G GFV+F
Sbjct: 82 APHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFY 141
Query: 100 NRENAEEALHKLNGTVI--GKQSVRLSWG 126
+ AE L +G ++ Q RL+W
Sbjct: 142 SHAAAERVLEGFSGHIMPNTDQPFRLNWA 170
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAE 105
+S+ +IFVG L +V D L + FS +Y + K+ + KG GFV+F +
Sbjct: 182 ASDHSIFVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKT 241
Query: 106 EALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 242 HAMTEMNGVYCSSRPMRI 259
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 133/186 (71%), Gaps = 14/186 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR+G A+ +K++G Q Q SS Y + QG S+ D +NTT+FV
Sbjct: 224 MTEMNGQYCSSRPMRLGPASNKKNTGGQPQPSSTI-YQNT----QGTDSDSDPNNTTVFV 278
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 279 GGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQS 338
Query: 121 VRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
+RLSWGR+PANKQ + + NQWS G Y Q YD YGYA PP DP+MY AY Y
Sbjct: 339 IRLSWGRSPANKQPQQE-QNQWSGGGYYGYPQGYDPYGYAR-PPQDPAMY-----AYTPY 391
Query: 179 PVYGSH 184
P YG++
Sbjct: 392 PGYGNY 397
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F S+Y + S K+ KG GFV
Sbjct: 153 GAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFV 212
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+FA+ + A+ ++NG + +RL N N
Sbjct: 213 KFADLDEQTRAMTEMNGQYCSSRPMRLGPASNKKN 247
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ SVKI K G GF++F N AE+ L
Sbjct: 73 TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVLQN 132
Query: 111 LNGTVIG--KQSVRLSWGRNPANKQFRADYGNQWS 143
NG ++ Q +L+W + A ++ R D G+ ++
Sbjct: 133 YNGQMMPNVNQPFKLNWATSGAGEK-RGDDGSDYT 166
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 123/170 (72%), Gaps = 10/170 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV+CSSRPMRIG A + +SG QQ S+ Y + QG Q+E D +NTTIFV
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGGQQ--FSKTSYQN----PQGAQNENDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+R AEEAL LNGT IG Q+
Sbjct: 270 GNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQN 329
Query: 121 VRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAIPPPNDPSMY 168
+RLSWGR+P+NKQ +AD NQW+ G Y GQ Y+ Y YA P P DP+M+
Sbjct: 330 IRLSWGRSPSNKQPQAD-PNQWNGGGYYGYGQGYENYSYA-PAPQDPNMF 377
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 41 GAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GC 93
G+P GQ PQS T+++G L + + + F+ GE++SVK+ K G
Sbjct: 50 GSPQGQPPQSANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 109
Query: 94 GFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
GF++F R AE L NGT + G Q+ RL+W
Sbjct: 110 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNW 143
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ A+ ++NG + +R+
Sbjct: 207 GDESEQMRAMTEMNGVHCSSRPMRI 231
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 122/183 (66%), Gaps = 14/183 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 270 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 319
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +AEEAL L GT++G Q+
Sbjct: 320 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQN 379
Query: 121 VRLSWGRNPANKQFRADYGNQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGR+P+NKQ + NQW+G A Y G Y P DP+MY A AY Y
Sbjct: 380 VRLSWGRSPSNKQVQD--SNQWAGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAGY 437
Query: 179 PVY 181
P Y
Sbjct: 438 PNY 440
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK------GCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + Y + K+ K G GFV+F +
Sbjct: 203 EKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 262
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 263 PNEQARAMTEMNGMLCSSRPMRI 285
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 116 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 175
Query: 105 EEALHKLNGTVIGKQSV--RLSWGRNPANKQFRADY 138
E L NGT++ + RL+W + DY
Sbjct: 176 ERVLQTYNGTMMPNVELPFRLNWASAGEKRDDTPDY 211
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 122/184 (66%), Gaps = 13/184 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 270 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 319
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +AEEAL L GT++G Q+
Sbjct: 320 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQN 379
Query: 121 VRLSWGRNPANKQFRADY-GNQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 177
VRLSWGR+P+NKQ + NQW+G A Y G Y P DP+MY A AY
Sbjct: 380 VRLSWGRSPSNKQVQPQQDSNQWAGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAG 439
Query: 178 YPVY 181
YP Y
Sbjct: 440 YPNY 443
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK------GCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + Y + K+ K G GFV+F +
Sbjct: 203 EKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 262
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 263 PNEQARAMTEMNGMLCSSRPMRI 285
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 116 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 175
Query: 105 EEALHKLNGTVIGKQSV--RLSWGRNPANKQFRADY 138
E L NGT++ + RL+W + DY
Sbjct: 176 ERVLQTYNGTMMPNVELPFRLNWASAGEKRDDTPDY 211
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 122/184 (66%), Gaps = 13/184 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++ Q++ S QG QS+ D +NTTIFV
Sbjct: 260 MTEMNGMLCSSRPMRIGPAANKKATVVQEKVPS----------AQGVQSDNDPNNTTIFV 309
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YG++ VKIPVGK CGFVQ+ANR +AEEAL L GT++G Q+
Sbjct: 310 GGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQN 369
Query: 121 VRLSWGRNPANKQFRADY-GNQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 177
VRLSWGR+P+NKQ + NQW+G A Y G Y P DP+MY A AY
Sbjct: 370 VRLSWGRSPSNKQVQPQQDSNQWAGANAGYYGYGQGYEAYGYPQSQDPNMYNYGAGAYAG 429
Query: 178 YPVY 181
YP Y
Sbjct: 430 YPNY 433
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK------GCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + Y + K+ K G GFV+F +
Sbjct: 193 EKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 252
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 253 PNEQARAMTEMNGMLCSSRPMRI 275
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
G S T+++G L + D + F+ GE+ +VK+ K G GF++F +R A
Sbjct: 106 GPSEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAA 165
Query: 105 EEALHKLNGTVIGKQSV--RLSWGRNPANKQFRADY 138
E L NGT++ + RL+W + DY
Sbjct: 166 ERVLQTYNGTMMPNVELPFRLNWASAGEKRDDTPDY 201
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 110/141 (78%), Gaps = 14/141 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+YCS+RP+RIG ATPR++ G + + PG S+GDS+N T++V
Sbjct: 35 MTEMNGIYCSTRPIRIGPATPRRT-----------GDSGSSTPGH---SDGDSTNRTVYV 80
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQ+ NR +A+EAL LNG+VIGKQ
Sbjct: 81 GGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQYVNRTDAKEALQGLNGSVIGKQV 140
Query: 121 VRLSWGRNPANKQFRADYGNQ 141
VRLSWGR+P++KQ R D GN+
Sbjct: 141 VRLSWGRSPSHKQSRGDSGNR 161
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 131/186 (70%), Gaps = 15/186 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSR MR+G A+ +K++G Q S Y + QG S+ D +NTT+FV
Sbjct: 222 MTEMNGQYCSSRAMRLGPASNKKNTGGPQ--PSSAIYQNT----QGTDSDSDPNNTTVFV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +AEEA+ LNG+ +G QS
Sbjct: 276 GGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQS 335
Query: 121 VRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
+RLSWGR+PANKQ + + +QWS G Y Q YD YGYA PP DP+MY AY AY
Sbjct: 336 IRLSWGRSPANKQPQQE-QSQWSGGGYYGYPQGYDPYGYA-RPPQDPAMY-----AYAAY 388
Query: 179 PVYGSH 184
P YG++
Sbjct: 389 PGYGNY 394
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + D S+ TIFVG L +VTD L+ F S+Y + K+ KG GFV
Sbjct: 151 GAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGFV 210
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+FA+ + A+ ++NG +++RL N N
Sbjct: 211 KFADSDEQTRAMTEMNGQYCSSRAMRLGPASNKKN 245
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L FSQ GE+ SVKI K G GF++F+N AE+ L
Sbjct: 71 TLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVLQN 130
Query: 111 LNGTVIG--KQSVRLSWGRNPANKQFRADYGNQWS 143
NG ++ Q +L+W + A ++ R D G+ ++
Sbjct: 131 YNGQMMPNVNQPFKLNWATSGAGEK-RGDDGSDYT 164
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 122/184 (66%), Gaps = 15/184 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ S QG QS+ D SNTTIFV
Sbjct: 139 MTEMNGMVCSSRPMRIGPAANKKATGVQEKVPS----------AQGVQSDSDPSNTTIFV 188
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFANR +A+EAL L GT+IG Q+
Sbjct: 189 GGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASADEALVLLQGTLIGGQN 248
Query: 121 VRLSWGRNPANKQFRADY-GNQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 177
VRLSWGR+P+N+Q + NQW G A Y G GY P DP+MY AY
Sbjct: 249 VRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQPQDPNMY--GYGAYAG 306
Query: 178 YPVY 181
YP Y
Sbjct: 307 YPNY 310
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ ++S G + D+ + TIFVG L +VTD L++ F
Sbjct: 53 GAMMPNVEQTYRLNWASAG------------EKRDDTPDYTIFVGDLAADVTDYILQETF 100
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
Y + K+ KG GFV+F + A+ ++NG V + +R+
Sbjct: 101 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRI 154
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 118/176 (67%), Gaps = 14/176 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + + Q +S N P QG Q+E D +NTTIFV
Sbjct: 219 MTEMQGVLCSTRPMRIGPASNKTPTTQSQPKAS----YQNSQP-QGSQNENDPNNTTIFV 273
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 274 GNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 333
Query: 121 VRLSWGRNPANKQFRADYGNQWS--------GAYYGGQVYDGYGYAIPPPNDPSMY 168
VRLSWGR+P+NKQ +AD NQW+ Y Q Y+ YGYA DP+MY
Sbjct: 334 VRLSWGRSPSNKQAQAD-PNQWNGGAGSGGGYYGYAAQGYENYGYAPAAGQDPNMY 388
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ SVK+ K G GF++F +R AE L
Sbjct: 67 TLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 126
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NG ++ G QS RL+W A ++ R D
Sbjct: 127 YNGAIMPNGGQSFRLNWATFSAGERSRHD 155
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F++
Sbjct: 156 DSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQ 215
Query: 105 EEALHKLNGTVIGKQSVRL 123
A+ ++ G + + +R+
Sbjct: 216 VRAMTEMQGVLCSTRPMRI 234
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 119/171 (69%), Gaps = 8/171 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K+ QQ Y++ G Y S+ +G SE D +NTT+FV
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSS----KGNSSENDPNNTTVFV 323
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ +G Q
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQK 383
Query: 121 VRLSWGRNPANKQF-RADYGNQWSG-AYYGGQV--YDGYGYAIPPPNDPSM 167
VRLSWGR+P N+Q + D NQ++G +YYG Q Y+GYGY DPSM
Sbjct: 384 VRLSWGRSPQNRQASQHDANNQYNGNSYYGYQQPGYEGYGYGASSAQDPSM 434
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 37 YASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG---- 90
+ N A GDS S+ TIFVG L +VTD L F ++Y + + V
Sbjct: 189 FKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTG 248
Query: 91 --KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAY 146
KG GFV+F + A+ ++NG ++ + +R+ N N+ + Y GAY
Sbjct: 249 WPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKKNRDAQQTYAT--DGAY 304
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 119/171 (69%), Gaps = 8/171 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K+ QQ Y++ G Y S+ +G SE D +NTT+FV
Sbjct: 268 MTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSS----KGNSSENDPNNTTVFV 323
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ +G Q
Sbjct: 324 GGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQK 383
Query: 121 VRLSWGRNPANKQF-RADYGNQWSG-AYYGGQV--YDGYGYAIPPPNDPSM 167
VRLSWGR+P N+Q + D NQ++G +YYG Q Y+GYGY DPSM
Sbjct: 384 VRLSWGRSPQNRQASQHDANNQYNGNSYYGYQQPGYEGYGYGASSAQDPSM 434
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 37 YASNGAPGQGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG---- 90
+ N A GDS S+ TIFVG L +VTD L F ++Y + + V
Sbjct: 189 FKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTG 248
Query: 91 --KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAY 146
KG GFV+F + A+ ++NG ++ + +R+ N N+ + Y GAY
Sbjct: 249 WPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAANKKNRDAQQTYAT--DGAY 304
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 124/187 (66%), Gaps = 17/187 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+R MRIG A +K + Q Q + Y S QG Q E D +NTTIFV
Sbjct: 218 MVEMNGQYCSTRAMRIGPAATKKPAVQQYQ---KAPYQST----QGTQGENDPNNTTIFV 270
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDP+V+DE LRQ F +YGE+ VKIP GK CGFVQFANR AE+AL LNGT + QS
Sbjct: 271 GALDPSVSDEHLRQVFGKYGELVHVKIPAGKRCGFVQFANRACAEQALLGLNGTQLAGQS 330
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVY-DGYGYAIPPPNDPSMYAAAAAAYGAYP 179
+RLSWGR+P+NKQ + D +QW+G YYG D YGYA PP DP+MY Y YP
Sbjct: 331 IRLSWGRSPSNKQAQPDQ-SQWNGGYYGYAQGYDAYGYA--PPQDPNMY------YSGYP 381
Query: 180 VYGSHQQ 186
YG++QQ
Sbjct: 382 GYGNYQQ 388
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + D + T+FVG L P+V D L++ F + Y + K+ KG GFV+F
Sbjct: 149 GERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYPSVKGAKVVTDRLTGRTKGYGFVRF 208
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFR 135
+ A+ ++NG +++R+ + + PA +Q++
Sbjct: 209 GDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAVQQYQ 247
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L + + L FS GE+ S K+ K G GF++F NR AE L
Sbjct: 67 SLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERILQT 126
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NGT + +Q+ RL+W A ++ + D
Sbjct: 127 YNGTQMPNTEQNFRLNWATLAAGERRQDD 155
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 126/195 (64%), Gaps = 24/195 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + + Q +S N P QG Q+E D +NTTIFV
Sbjct: 220 MTEMQGVLCSTRPMRIGPASNKTPATQSQPKAS----YLNSQP-QGSQNENDPNNTTIFV 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 275 GNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 334
Query: 121 VRLSWGRNPANKQFRADYGNQWS----------GAYYGGQVYDGYGYAIPPPNDPSMYAA 170
VRLSWGR+P+NKQ +AD NQW+ Y Q Y+ YGYA P DP+M
Sbjct: 335 VRLSWGRSPSNKQAQAD-PNQWNGAAGAGSGGGYYGYAAQGYENYGYA-PAGQDPNM--- 389
Query: 171 AAAAYGAYPVYGSHQ 185
YG+YP Y +Q
Sbjct: 390 ----YGSYPGYPGYQ 400
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE++SVK+ K G GF++F +R AE L
Sbjct: 68 TLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQT 127
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NG ++ G QS RL+W A ++ R D
Sbjct: 128 YNGAIMPNGGQSFRLNWATFSAGERSRQD 156
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRE 102
+ DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F+
Sbjct: 155 QDDSPDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEES 214
Query: 103 NAEEALHKLNGTVIGKQSVRL--SWGRNPANK-QFRADYGN 140
A+ ++ G + + +R+ + + PA + Q +A Y N
Sbjct: 215 EQMRAMTEMQGVLCSTRPMRIGPASNKTPATQSQPKASYLN 255
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 127/193 (65%), Gaps = 11/193 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGY--ASNGAPGQGPQ-SEGDSSNT 56
M+EMNGVYCS+RPMRI AA P+KSSG Q QY +++ Y A+ P P + D +NT
Sbjct: 169 MSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALPDSDLTNT 228
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPN T+E+LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 229 TIFIGNLDPNATEEELRQLCVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 288
Query: 117 GKQSVRLSWGRNPANKQFR-ADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
G+Q VRLSWGR+PANKQ + A + Q + G Y DPS AY
Sbjct: 289 GQQVVRLSWGRSPANKQDQSAAWTQQADPNQWTGAYYGYGYDPYGYAQDPSY------AY 342
Query: 176 GAYPVYGSHQQQV 188
GAY Y + QQV
Sbjct: 343 GAYAGYSQYPQQV 355
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 109 DHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKTRA 168
Query: 108 LHKLNGTVIGKQSVRLS 124
+ ++NG + +R+S
Sbjct: 169 MSEMNGVYCSTRPMRIS 185
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 18 TLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVLQT 77
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + + + RL+W
Sbjct: 78 YNGAQMPGSEHTFRLNWA 95
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 122/184 (66%), Gaps = 15/184 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ S QG QS+ D SNTTIFV
Sbjct: 244 MTEMNGMVCSSRPMRIGPAANKKATGVQEKVPS----------AQGVQSDSDPSNTTIFV 293
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP+VTD+ L+Q F+ YG++ VKIPVGK CGFVQFANR +A+EAL L GT+IG Q+
Sbjct: 294 GGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASADEALVLLQGTLIGGQN 353
Query: 121 VRLSWGRNPANKQFRADY-GNQWSG--AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 177
VRLSWGR+P+N+Q + NQW G A Y G GY P DP+MY AY
Sbjct: 354 VRLSWGRSPSNRQAQPQQDSNQWGGANAGYYGYGQGYEGYGYAQPQDPNMY--GYGAYAG 411
Query: 178 YPVY 181
YP Y
Sbjct: 412 YPNY 415
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ ++S G + D+ + TIFVG L +VTD L++ F
Sbjct: 158 GAMMPNVEQTYRLNWASAG------------EKRDDTPDYTIFVGDLAADVTDYILQETF 205
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
Y + K+ KG GFV+F + A+ ++NG V + +R+
Sbjct: 206 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRI 259
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ SVK+ K G GF++F + AE L
Sbjct: 96 TLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQT 155
Query: 111 LNGTVIG--KQSVRLSWGRNPANKQFRADY 138
NG ++ +Q+ RL+W + DY
Sbjct: 156 YNGAMMPNVEQTYRLNWASAGEKRDDTPDY 185
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/199 (50%), Positives = 128/199 (64%), Gaps = 23/199 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNVT+++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 227 TIFIGNLDPNVTEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GKQSVRLSWGRNPANKQF-------RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 169
G+Q+VRLSWGR+PA+KQ +AD NQW+ YYG DPS
Sbjct: 287 GQQAVRLSWGRSPASKQDPSAVWSQQAD-PNQWANTYYGYGYDAYGYA-----QDPSY-- 338
Query: 170 AAAAAYGAYPVYGSHQQQV 188
AYGAY Y + QQ+
Sbjct: 339 ----AYGAYAGYSQYPQQI 353
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 107 ALHKLNGTVIGKQSVRLS 124
A+ ++NG + +R+S
Sbjct: 166 AMTEMNGVYCSTRPMRIS 183
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 76 YNGTQMPGTEHTFRLNWA 93
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 120/191 (62%), Gaps = 18/191 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A RK++G Q++ QG QS+ D +NTTIFV
Sbjct: 240 MTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNT------QGAQSDNDPNNTTIFV 293
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ANR +AE+AL L GT++G Q+
Sbjct: 294 GGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRCGFVQYANRPSAEQALQLLQGTLVGGQN 353
Query: 121 VRLSWGRNPANKQFRADYGNQW----------SGAYYGGQVYDGYGYAIPPPNDPSMYAA 170
VRLSWGR+P+NKQ + QW GQ Y+ YG P DP+MY
Sbjct: 354 VRLSWGRSPSNKQTQPQEATQWGAGAAAGAAGGYYAGYGQGYEAYGQGYAQPQDPNMY-- 411
Query: 171 AAAAYGAYPVY 181
AY YP Y
Sbjct: 412 GYGAYAGYPNY 422
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 173 EKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 232
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 233 PTEQARAMTEMNGMPCSSRPMRI 255
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE SVK+ K G GFV+FA+ AE L
Sbjct: 92 TLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVLQT 151
Query: 111 LNGTVIGKQSV--RLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 152 FNGQMMPNVELAYRLNWASAGEKRDDTPDY 181
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 121/175 (69%), Gaps = 15/175 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV+CSSRPMRIG A + +SG QQ S+ Y + G Q+E D +NTTIFV
Sbjct: 216 MTEMNGVHCSSRPMRIGPAANKNTSGSQQ--FSKTSYQN----PPGTQNENDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTDE LRQ FSQYGE+ VKIP GK CGFVQF++R AEEAL LNGT IG Q+
Sbjct: 270 GNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQN 329
Query: 121 VRLSWGRNPANKQFRADYGNQWS-------GAYYGGQVYDGYGYAIPPPNDPSMY 168
+RLSWGR+P+NKQ +AD NQW+ G Y GQ Y+ Y YA P DP+M+
Sbjct: 330 IRLSWGRSPSNKQPQAD-PNQWNGGGGGGGGYYGYGQGYENYSYA-PAAQDPNMF 382
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 41 GAP-GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GC 93
G+P GQ PQ T+++G L + + + F+ GE++SVK+ K G
Sbjct: 50 GSPQGQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGY 109
Query: 94 GFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
GF++F R AE L NGT + G Q+ RL+W
Sbjct: 110 GFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNW 143
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + + DS + TIFVG L +VTD L++ F ++Y + K+ + KG GFV+F
Sbjct: 147 GEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKF 206
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL 123
+ A+ ++NG + +R+
Sbjct: 207 GDESEQIRAMTEMNGVHCSSRPMRI 231
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 107/129 (82%), Gaps = 4/129 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T++VGGLDPNV++++LR+ F++YG++ASVKIP+GK CGFVQF +R +AEEAL LNG+VI
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYG 176
GKQ+VRLSWGR+P++KQ RAD G++ + YYG Y GYGYA P P+ P+MY AAAYG
Sbjct: 61 GKQAVRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPH-PNMY---AAAYG 116
Query: 177 AYPVYGSHQ 185
AYPVYGS Q
Sbjct: 117 AYPVYGSQQ 125
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 123/193 (63%), Gaps = 11/193 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GKQSVRLSWGRNPANKQ-FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
G+Q+VRLSWGR+PA+KQ A + Q + Y A DPS AY
Sbjct: 287 GQQAVRLSWGRSPASKQDSSAVWSQQADPNQWANAYYGYGYDAYGYAQDPSY------AY 340
Query: 176 GAYPVYGSHQQQV 188
GAY Y + QQV
Sbjct: 341 GAYAGYSQYPQQV 353
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 107 ALHKLNGTVIGKQSVRLS 124
A+ ++NG + +R+S
Sbjct: 166 AMTEMNGVYCSTRPMRIS 183
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 76 YNGTQMPGTEHTFRLNWA 93
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 123/193 (63%), Gaps = 11/193 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----QGPQSEGDSSNT 56
MTEMNGVYCS+RPMRI AA P+KS+G Q QYS+ A Q + D +NT
Sbjct: 167 MTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNT 226
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LDPNV +++LRQ Q+GE+ VKIPVGKGCGFVQ+A+R +AEEA+ +L+GT+I
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMI 286
Query: 117 GKQSVRLSWGRNPANKQ-FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
G+Q+VRLSWGR+PA+KQ A + Q + Y A DPS AY
Sbjct: 287 GQQAVRLSWGRSPASKQDSSAVWSQQADPNQWANTYYGYGYDAYGYAQDPSY------AY 340
Query: 176 GAYPVYGSHQQQV 188
GAY Y + QQV
Sbjct: 341 GAYAGYSQYPQQV 353
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+
Sbjct: 106 SDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNR 165
Query: 107 ALHKLNGTVIGKQSVRLS 124
A+ ++NG + +R+S
Sbjct: 166 AMTEMNGVYCSTRPMRIS 183
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 16 TLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKILQT 75
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 76 YNGTQMPGTEHTFRLNWA 93
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 124/197 (62%), Gaps = 22/197 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++G + Y S Q P + D
Sbjct: 166 MTEMNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPP--DYD 223
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF R +AEEA+ K+
Sbjct: 224 VNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQ 283
Query: 113 GTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAA 171
G +IG+Q VR+SWGR +Q NQWS AYYG GQ Y+ Y Y P +DPS+Y
Sbjct: 284 GKMIGQQVVRISWGRTLTARQMDP---NQWS-AYYGYGQGYEAYAYG--PAHDPSLY--- 334
Query: 172 AAAYGAYPVYGSHQQQV 188
AYGAYP Y + QQV
Sbjct: 335 --AYGAYPGYAQYPQQV 349
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 108 SIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMT 167
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 168 EMNGVYCSTRPMRIS 182
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F GE+ S+KI K G GFV+F + AE L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + Q+ RL+W
Sbjct: 75 YNGTQMPATDQTFRLNWA 92
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/196 (51%), Positives = 125/196 (63%), Gaps = 25/196 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG AT + + ++Q + + PG QSE D +NTTIFV
Sbjct: 211 MTEMQGVLCSTRPMRIGPATNKNPAA-----TTQAKASYSNTPGG--QSENDPNNTTIFV 263
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ FSQYGE+ VKIP GK CGFVQF++R +AEEA+ LNGT++G Q+
Sbjct: 264 GNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRVLNGTLLGGQN 323
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVY---------DGYGYAIPPP-NDPSMYAA 170
VRLSWGR P+NKQ + D NQW+ A GG + YGYA P DP++
Sbjct: 324 VRLSWGRTPSNKQTQQD-PNQWNAAAAGGGGGYYGYPQGGYENYGYAAAPAGQDPNV--- 379
Query: 171 AAAAYGAYPVYGSHQQ 186
YG+YP Y +Q
Sbjct: 380 ----YGSYPGYAGYQH 391
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G+ + D + TIFVG L +VTD L++ F ++Y + K+ + KG GFV
Sbjct: 140 GERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFV 199
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL--SWGRNP-ANKQFRADYGN 140
+FA+ A+ ++ G + + +R+ + +NP A Q +A Y N
Sbjct: 200 RFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAATTQAKASYSN 246
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-- 91
Q +A + P Q P S + T+++G L + + L F GE+ SVK+ K
Sbjct: 37 QALWAQSAQPPQQPASADEVR--TLWIGDLQYWMDENYLYTCFGNTGEVTSVKVIRNKQT 94
Query: 92 ----GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
G GF++F R +AE L G ++ G QS RL+W
Sbjct: 95 SQSEGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRLNW 134
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 119/188 (63%), Gaps = 19/188 (10%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K SG Q++ S QG QS+ D SNTTIF
Sbjct: 247 MTEMNGMVCSSRPMRIGPAANKQKVSGAQEKVPS----------AQGVQSDSDPSNTTIF 296
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R ++EEAL L GTVIG Q
Sbjct: 297 VGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYASRSSSEEALLMLQGTVIGGQ 356
Query: 120 SVRLSWGRNPANKQFRADY-GNQWSGAYYGGQVYDGYGYAIPP-----PNDPSMYAAAAA 173
+VRLSWGR+P+NKQ + NQW GA Y P DP+MY
Sbjct: 357 NVRLSWGRSPSNKQVQTPQDSNQWGGATANAGYYGYGQGYEAYGYAAQPQDPNMY--GYG 414
Query: 174 AYGAYPVY 181
AY YP Y
Sbjct: 415 AYAGYPNY 422
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ ++S G + D + TIFVG L +VTD L++ F
Sbjct: 161 GATMPNVEMPYRLNWASAG------------EKRDDGPDYTIFVGDLAADVTDYILQETF 208
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
Y + K+ KG GFV+F++ A+ ++NG V + +R+
Sbjct: 209 RVHYPSVKGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMRI 262
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ SVK+ K G GFV+F R AE L
Sbjct: 99 TLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVLQT 158
Query: 111 LNGTVIGKQSV--RLSW 125
NG + + RL+W
Sbjct: 159 YNGATMPNVEMPYRLNW 175
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 110/169 (65%), Gaps = 14/169 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNG+ C R MRIGAA +KS G Y + QG ++ D SNTTIFV
Sbjct: 142 MSEMNGMMCLGRAMRIGAAANKKSVGGTASYQN----------NQGTPNDSDPSNTTIFV 191
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NVTDE LRQ FS YGE+ VKIP GK CGFVQF NR +AEEAL LNG +G ++
Sbjct: 192 GNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNRSSAEEALRVLNGMQLGGRN 251
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGG--QVYDGYGYAIPPPNDPSM 167
VRLSWGR+P N+Q + D NQW+ A Y G Q YD YGY + P DP+M
Sbjct: 252 VRLSWGRSPNNRQSQPD-QNQWNNAAYYGYPQGYDSYGY-VSAPQDPNM 298
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFV 96
G G + D+S+ TIFVG L P+VTD L++ F +Y + K+ + KG GFV
Sbjct: 71 GSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFV 130
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL 123
+F + A+ ++NG + +++R+
Sbjct: 131 RFGDESEQARAMSEMNGMMCLGRAMRI 157
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 120/189 (63%), Gaps = 21/189 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GV CS+RPMRIG A+ + S Q +S QG Q+E D +NTTIFV
Sbjct: 213 MTEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-------PQGAQNEHDPNNTTIFV 265
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ F YGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 266 GNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 325
Query: 121 VRLSWGRNPANKQFRADYGNQWS-----GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
VRLSWGR+P+NKQ + D NQW+ Y Y+ YGYA P DP+M Y
Sbjct: 326 VRLSWGRSPSNKQAQPD-ANQWNGSGGGYYGYAQGGYENYGYA-PAGQDPNM-------Y 376
Query: 176 GAYPVYGSH 184
G+YP Y ++
Sbjct: 377 GSYPGYANY 385
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ T+++G L + + L + GE+ASVK+ K G GF++F +
Sbjct: 52 PQPTSADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTS 111
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
R AE L NGT++ G Q+ RL+W A ++ D
Sbjct: 112 RAGAERVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDD 150
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +VTD L++ F ++Y I K+ + KG GFV+F
Sbjct: 144 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRF 203
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANK-QFRADYGN 140
+ A+ ++ G + + +R+ + +NP+ + Q +A Y N
Sbjct: 204 GDESEQVRAMTEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN 248
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 121/190 (63%), Gaps = 22/190 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EM GV CS+RPMRIG A+ + S Q +S QG Q+E D +NTTIFV
Sbjct: 217 MSEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN-------PQGAQNEHDPNNTTIFV 269
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDPNVTD+ LRQ F QYGE+ VKIP GK CGFVQFA+R AEEAL LNGT++G Q+
Sbjct: 270 GNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQN 329
Query: 121 VRLSWGRNPANKQFRADYGNQWS------GAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
VRLSWGR+P+NKQ + D NQW+ Y Y+ YGYA P DP+M
Sbjct: 330 VRLSWGRSPSNKQAQPD-ANQWNGSGGGGYYGYAQGGYENYGYA-PAGQDPNM------- 380
Query: 175 YGAYPVYGSH 184
YG+YP Y ++
Sbjct: 381 YGSYPGYANY 390
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFAN 100
PQ T+++G L + + L F+ GE+ASVK+ K G GF++F +
Sbjct: 56 PQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTS 115
Query: 101 RENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
R AE L NGT++ G Q+ RL+W A ++ D
Sbjct: 116 RAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDD 154
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQF 98
G + DS + TIFVG L +VTD L++ F ++Y K+ + KG GFV+F
Sbjct: 148 GERRHDDSPDHTIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRF 207
Query: 99 ANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANK-QFRADYGN 140
+ A+ ++ G + + +R+ + +NP+ + Q +A Y N
Sbjct: 208 GDESEQVRAMSEMQGVLCSTRPMRIGPASNKNPSTQSQPKASYQN 252
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 120/187 (64%), Gaps = 19/187 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 188 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 237
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 238 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 297
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPP------PNDPSMYAAAAAA 174
VRLSWGR+ +NKQ + D NQW G Y GYG P DP+MY A
Sbjct: 298 VRLSWGRSLSNKQPQHD-SNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMY--GYGA 354
Query: 175 YGAYPVY 181
Y YP Y
Sbjct: 355 YAGYPNY 361
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 121 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 180
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 181 PTEQARAMTEMNGMLCSSRPMRI 203
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 40 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 99
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 100 YNGQMMPNVEMVFRLNWASAGEKRDDTPDY 129
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 126/203 (62%), Gaps = 25/203 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++G + Y S Q P + D
Sbjct: 166 MTEMNGVYCSTRPMRISAATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQVQPP--DYD 223
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTTIFVG LD NV++E+L+Q Q+GEI SVKI GKG GFVQF R +AEEA+ K+
Sbjct: 224 VNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQ 283
Query: 113 GTVIGKQSVRLSWGRNPANKQ-FRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDP 165
G +IG+Q VR+SWGR +Q +G NQWS AYYG GQ Y+ Y Y P +DP
Sbjct: 284 GKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS-AYYGYGQGYEAYAYG--PAHDP 340
Query: 166 SMYAAAAAAYGAYPVYGSHQQQV 188
S+Y AYGAYP Y + QQV
Sbjct: 341 SLY-----AYGAYPGYAQYPQQV 358
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 108 SIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMT 167
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 168 EMNGVYCSTRPMRIS 182
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L F GE+ S+KI K G GFV+F + AE L
Sbjct: 15 TLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVLQT 74
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + Q+ RL+W
Sbjct: 75 YNGTQMPATDQTFRLNWA 92
>gi|413918499|gb|AFW58431.1| hypothetical protein ZEAMMB73_000058 [Zea mays]
Length = 175
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 112/142 (78%), Gaps = 6/142 (4%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+GDSSN T++VGGLDPNV++++LR+ F++Y ++ASVKIP+GK CGFVQF +R +AEEA
Sbjct: 40 HSDGDSSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQCGFVQFVSRTDAEEA 98
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
L LNG++IGKQ+VRLSW R+P++KQ R D N+ + YYG Y GYGYA P P+ P+M
Sbjct: 99 LQGLNGSLIGKQAVRLSWVRSPSHKQSRGDSVNRRNNMYYGTPFYGGYGYASPVPH-PNM 157
Query: 168 YAAAAAAYGAYPVYGSHQQQVS 189
Y AAAYG YP+YG +QQ VS
Sbjct: 158 Y---AAAYGTYPLYG-NQQLVS 175
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 104/142 (73%), Gaps = 11/142 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 240 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 289
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 290 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 349
Query: 121 VRLSWGRNPANKQFRADYGNQW 142
VRLSWGR+ +NKQ + D NQW
Sbjct: 350 VRLSWGRSLSNKQPQHD-SNQW 370
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 173 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 232
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 233 PTEQARAMTEMNGMLCSSRPMRI 255
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 92 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 151
Query: 111 LNGTVIG--KQSVRLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 152 YNGQMMPNVEMVFRLNWASAGEKRDDTPDY 181
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 104/142 (73%), Gaps = 11/142 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 239 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 288
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 289 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 348
Query: 121 VRLSWGRNPANKQFRADYGNQW 142
VRLSWGR+ +NKQ + D NQW
Sbjct: 349 VRLSWGRSLSNKQPQHD-SNQW 369
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 172 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 231
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 232 PTEQARAMTEMNGMLCSSRPMRI 254
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 91 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 150
Query: 111 LNGTVIG--KQSVRLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 151 YNGQMMPNVEMVFRLNWASAGEKRDDTPDY 180
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 104/142 (73%), Gaps = 11/142 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A +K++G Q++ + QG QSE D +NTTIFV
Sbjct: 228 MTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN----------AQGAQSENDPNNTTIFV 277
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+IG Q+
Sbjct: 278 GGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQN 337
Query: 121 VRLSWGRNPANKQFRADYGNQW 142
VRLSWGR+ +NKQ + D NQW
Sbjct: 338 VRLSWGRSLSNKQPQHD-SNQW 358
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 161 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGD 220
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 221 PTEQARAMTEMNGMLCSSRPMRI 243
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L P + + + F+ GE+ SVK+ K G GFV+F +R A+ L
Sbjct: 80 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 139
Query: 111 LNGTVIG--KQSVRLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 140 YNGQMMPNVEMVFRLNWASAGEKRDDTPDY 169
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 99/133 (74%), Gaps = 8/133 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ CSSRPMRIG A RK++G Q++ + QG QS+ D +NTTIFV
Sbjct: 237 MTEMNGMPCSSRPMRIGPAANRKTTGVQERVPNTN--------TQGAQSDNDPNNTTIFV 288
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQF NR +AE+AL L GT IG Q+
Sbjct: 289 GGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRCGFVQFVNRPSAEQALQMLQGTPIGGQN 348
Query: 121 VRLSWGRNPANKQ 133
VRLSWGR+P+NKQ
Sbjct: 349 VRLSWGRSPSNKQ 361
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G A P Y+ ++S G + D+ + TIFVG L +VTD L++ F
Sbjct: 151 GHAMPNVDLAYRLNWASAG------------EKRDDTPDYTIFVGDLAADVTDYILQETF 198
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
Y + K+ KG GFV+F + A+ ++NG + +R+
Sbjct: 199 RVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRI 252
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 112/144 (77%), Gaps = 7/144 (4%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+GDS+N T++VGGLD NV++++LR+ F++YG++ASVKIP+GK CGFVQ+ NR +AEEA
Sbjct: 14 HSDGDSNNRTVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEEA 73
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGA--YYGGQVYDGYGYAIPPPNDP 165
L LNG VIGKQ+VRLSWGR+P++KQ R D GN+ + YYG Y GYGYA P P+ P
Sbjct: 74 LQGLNGAVIGKQAVRLSWGRSPSHKQSRGDSGNRRNNNNMYYGTPFYGGYGYASPVPH-P 132
Query: 166 SMYAAAAAAYGAYPVYGSHQQQVS 189
+MY A AYGAYP YG +QQ VS
Sbjct: 133 NMY---APAYGAYPFYG-NQQLVS 152
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 15/192 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIG 275
Query: 118 KQSVRLSWGRNPANKQFRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSMYAAAAAAYG 176
+Q +++SWG + +Q +QWS AYYG GQ Y+ Y Y DPS+Y YG
Sbjct: 276 QQVIQISWGSSMTARQMDP---SQWS-AYYGYGQGYEAYAYG--ATQDPSIY-----TYG 324
Query: 177 AYPVYGSHQQQV 188
AY Y + QQV
Sbjct: 325 AYAGYAQYPQQV 336
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP 160
A+ ++NG + +R+S N F+ Y A Y Y A+
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAP--PKAMYQFPAYSAPVSAVA 206
Query: 161 PPND 164
P ND
Sbjct: 207 PEND 210
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + +Q+ RL+W
Sbjct: 71 YNGAQMPGTEQTFRLNWA 88
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 105/142 (73%), Gaps = 9/142 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG S+ D +NTT+FVGGLDP+VTDE L+Q FS YGE+ VKIPVGK CGFVQ++NR +A
Sbjct: 22 QGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASA 81
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIPPP 162
EEA+ LNG+ +G QS+RLSWGR+P NKQ + D NQW+ YYG Q YD YGY + PP
Sbjct: 82 EEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQD-QNQWNAGYYGYPPQGYDPYGY-VRPP 139
Query: 163 NDPSMYAAAAAAYGAYPVYGSH 184
DP+MY AY AYP YG++
Sbjct: 140 QDPAMY-----AYAAYPGYGNY 156
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 113/186 (60%), Gaps = 14/186 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CS+RPMRIG A +K G Q+ + Q A+ G E D +NTTIFV
Sbjct: 235 MTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQG--------ESDPNNTTIFV 286
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP V +E LRQ FS YGE+ VKI GK CGFVQF R +AE+AL LNGT +G QS
Sbjct: 287 GGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQS 346
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
+RLSWGR+P++KQ GAYYG PP DP+MY YG YP
Sbjct: 347 IRLSWGRSPSSKQTDQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMY------YGNYPG 400
Query: 181 YGSHQQ 186
Y ++QQ
Sbjct: 401 YANYQQ 406
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 104
DS+ TIFVG L +VTD L++ F S Y + K+ KG GFV+FA+
Sbjct: 172 DSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQ 231
Query: 105 EEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGN 140
A+ ++NG + + +R+ + + P +A Y N
Sbjct: 232 LRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQN 269
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 28 QQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
QQQY + N +P P + ++++G L + + L F GE+ S K+
Sbjct: 61 QQQYGAMATTNPNPSPTGNP-----NEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKV 115
Query: 88 PVGK------GCGFVQFANRENAEEALHKLNGTVIG--KQSVRLSWG 126
K G GF++F + AE L NGT++ +Q+ R++W
Sbjct: 116 IRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWA 162
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 103/142 (72%), Gaps = 7/142 (4%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG Q E D +NTTIFVGGLD NVTD+ LRQ FSQYGE+ VKIPVGK CGFVQFANR A
Sbjct: 41 QGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 100
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPND 164
E+AL LNGT +G QS+RLSWGR+P+NKQ + D G Y Q Y+ YGYA PPP D
Sbjct: 101 EQALAGLNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYA-PPPQD 159
Query: 165 PSMYAAAAAAYGAYPVYGSHQQ 186
P+MY YGAYP YG++QQ
Sbjct: 160 PNMY------YGAYPGYGNYQQ 175
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 115/187 (61%), Gaps = 15/187 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-GPQSEGDSSNTTIF 59
MTEM+GVYCSSRPMRI ATP+K + QQ + Y A P E D +NTTIF
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPKKQT--QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIF 223
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF R +AEEAL +++G+VIG+Q
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQ 283
Query: 120 SVRLSWGRNPANKQ---------FRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSM-YA 169
+VRLSWGR+PANKQ ++ + +QW+ Y Y Y P DP++ Y
Sbjct: 284 TVRLSWGRHPANKQRLSSSALPWYQPPFDSQWNAFYPYNHSQAPYAYLY--PQDPALVYT 341
Query: 170 AAAAAYG 176
YG
Sbjct: 342 TGYQVYG 348
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA PR ++ ++ GG ++ +IFVG L +VTD L + F
Sbjct: 79 GAVMPRTEQAFRLNWACVGG-----------DKRDSGADDSIFVGDLAADVTDAMLLETF 127
Query: 77 -SQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
S+Y + S K+ + +G GFV+F + A+ +++G + +R+
Sbjct: 128 KSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDEAEKSSAMTEMHGVYCSSRPMRI 181
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 115/171 (67%), Gaps = 8/171 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K++ QQ Y++ G Y S+ QG SE D +NTT+FV
Sbjct: 300 MTEMNGMMLSTRKMRIGAAASKKNTDAQQTYATNGAYQSS----QGNCSENDPNNTTVFV 355
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ IG Q
Sbjct: 356 GGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQK 415
Query: 121 VRLSWGRNPANKQF-RADYGNQWSG-AYYGGQV--YDGYGYAIPPPNDPSM 167
RLSWGR+ N+Q + D +Q++G YY Q +GY Y P DPS+
Sbjct: 416 ARLSWGRSTQNRQASQHDANSQYNGNNYYRYQQPGNEGYSYGAPNAQDPSI 466
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEE 106
S+ IFVG L P+VTD L F + Y + K+ V KG GFV F +
Sbjct: 239 SDHAIFVGDLAPDVTDSMLEDVFRANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQAR 298
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 150
A+ ++NG ++ + +R+ + N + Y +GAY Q
Sbjct: 299 AMTEMNGMMLSTRKMRIGAAASKKNTDAQQTYAT--NGAYQSSQ 340
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 115/171 (67%), Gaps = 8/171 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG+ S+R MRIGAA +K++ QQ Y++ G Y S+ QG SE D +NTT+FV
Sbjct: 269 MTEMNGMMLSTRKMRIGAAASKKNTDAQQTYATNGAYQSS----QGNCSENDPNNTTVFV 324
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD NV +E LRQ F+ YGEI+ VKIPVGK CGFVQF +R AEEA+ LNG+ IG Q
Sbjct: 325 GGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQK 384
Query: 121 VRLSWGRNPANKQF-RADYGNQWSG-AYYGGQV--YDGYGYAIPPPNDPSM 167
RLSWGR+ N+Q + D +Q++G YY Q +GY Y P DPS+
Sbjct: 385 ARLSWGRSTQNRQASQHDANSQYNGNNYYRYQQPGNEGYSYGAPNAQDPSI 435
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENAEE 106
S+ IFVG L P+VTD L F + Y + K+ V KG GFV F +
Sbjct: 208 SDHAIFVGDLAPDVTDSMLEDVFRANYPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQAR 267
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQ 150
A+ ++NG ++ + +R+ + N + Y +GAY Q
Sbjct: 268 AMTEMNGMMLSTRKMRIGAAASKKNTDAQQTYAT--NGAYQSSQ 309
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 115/194 (59%), Gaps = 26/194 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 241 MTEMNGMPCSSRPMRIGPAASRKNTG---------GVVQERVPNSQGAQSENDPNNTTIF 291
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 292 VGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 351
Query: 120 SVRLSWGRNPANKQFR-ADYGNQWSGAYYGGQVYDGY-----------GYAIPPPNDPSM 167
+VRLSWGR+ +NKQ + NQW A G GYA P DP+M
Sbjct: 352 NVRLSWGRSLSNKQAQPQQESNQWGAAAAAGAGGYYGGYGQGYEAYGSGYA--QPQDPNM 409
Query: 168 YAAAAAAYGAYPVY 181
Y AY YP Y
Sbjct: 410 Y--GYGAYAGYPNY 421
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 174 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 233
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 234 PTEQARAMTEMNGMPCSSRPMRI 256
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F GE+ +VK+ K G GFV+F +R AE L
Sbjct: 93 TLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 152
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRADY 138
NG ++ + + RL+W + DY
Sbjct: 153 YNGQMMPNVELTFRLNWASAGEKRDDTPDY 182
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 124/199 (62%), Gaps = 12/199 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---------PGQGPQSEG 51
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++G S A PGQG E
Sbjct: 174 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQGLPPES 233
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TTI + LDPNVT+E+L++ FSQ GEI VKIP KG G+VQF R +AEEA+ K+
Sbjct: 234 DVTCTTISIANLDPNVTEEELKKAFSQLGEIIYVKIPATKGYGYVQFKTRPSAEEAVQKM 293
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRADYG-NQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 170
G VIG+Q+VR+SW +NP + A NQW+G Y GQ YD YGY DPS+YA
Sbjct: 294 QGQVIGQQAVRISWSKNPGQDGWVAQADPNQWNGYYGYGQGYDAYGYGT--TQDPSLYAY 351
Query: 171 AAAAYGAYPVYGSHQQQVS 189
Y YP G Q +S
Sbjct: 352 GGYGYPQYPQQGEGTQDIS 370
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 24 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 83
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 84 YNGTQMPGTELTFRLNWA 101
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 116 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 175
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 176 EMNGLYCSTRPMRIS 190
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 108/146 (73%), Gaps = 13/146 (8%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K++G Q++ + QG Q++ D SN+TIF
Sbjct: 232 MTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT----------AQGIQTDNDPSNSTIF 281
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R +AEEAL L GT+I Q
Sbjct: 282 VGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEGQ 341
Query: 120 SVRLSWGRNPANKQFRADYGNQWSGA 145
+VRLSWGR+P+NKQ + D+ NQW GA
Sbjct: 342 NVRLSWGRSPSNKQVQ-DF-NQWGGA 365
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
+ D ++ TIFVG L +VTD L++ F +QY + K+ KG GFV+F +
Sbjct: 165 EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSVKGAKVVTDKLTMRSKGYGFVKFGD 224
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + + +R+
Sbjct: 225 PTEQTRAMTEMNGMICSSRPMRI 247
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 91
Y P Q P G + T+++G L + + + F+ GE+ SVK+ K
Sbjct: 66 YGWPSVPTQAP--AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQL 123
Query: 92 -GCGFVQFANRENAEEALHKLNGTVIG--KQSVRLSWGRNPANKQFRADY 138
G GF++F +R AE L NG ++ + + RL+W ADY
Sbjct: 124 QGYGFIEFTSRAGAERVLQTFNGAMMPNVEMTYRLNWATAGEKHDDGADY 173
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 109/148 (73%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIG-AATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG AA +K++G Q++ + QG Q++ D SN+TIF
Sbjct: 232 MTEMNGMICSSRPMRIGPAANKQKANGVQEKVPT----------AQGIQTDNDPSNSTIF 281
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDP+ T++ L+Q F+ YGE+ VKIPVGK CGFVQ+A+R +AEEAL L GT+I Q
Sbjct: 282 VGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEGQ 341
Query: 120 SVRLSWGRNPANKQFRA--DYGNQWSGA 145
+VRLSWGR+P+NKQ ++ D+ NQW GA
Sbjct: 342 NVRLSWGRSPSNKQVQSQQDF-NQWGGA 368
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 19/114 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA P Y+ +++ G + D ++ TIFVG L +VTD L++ F
Sbjct: 146 GAMMPNVEMAYRLNWATAG------------EKHDDGADYTIFVGDLAADVTDYLLQETF 193
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+QY + K+ KG GFV+F + A+ ++NG + + +R+
Sbjct: 194 RAQYPSVKGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRI 247
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 91
Y P Q P G + T+++G L + + + F+ GE+ SVK+ K
Sbjct: 66 YGWPSVPTQAP--AGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQL 123
Query: 92 -GCGFVQFANRENAEEALHKLNGTVIG--KQSVRLSWGRNPANKQFRADY 138
G GF++F +R AE L NG ++ + + RL+W ADY
Sbjct: 124 QGYGFIEFTSRAGAERVLQTFNGAMMPNVEMAYRLNWATAGEKHDDGADY 173
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 99/144 (68%), Gaps = 11/144 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 241 MTEMNGMPCSSRPMRIGPAASRKNTG---------GVVQERVPNSQGAQSENDPNNTTIF 291
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 292 VGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 351
Query: 120 SVRLSWGRNPANKQFR-ADYGNQW 142
+VRLSWGR+ +NKQ + NQW
Sbjct: 352 NVRLSWGRSLSNKQAQPQQESNQW 375
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 174 EKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 233
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 234 PTEQARAMTEMNGMPCSSRPMRI 256
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 93 TLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 152
Query: 111 LNGTVIGKQSV--RLSWG 126
NG ++ + RL+W
Sbjct: 153 YNGQMMPNVDLTFRLNWA 170
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 106/147 (72%), Gaps = 7/147 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 190 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 249
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+ +L+GT I
Sbjct: 250 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 309
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWS 143
G+Q VRLSWGR+PA+KQ D WS
Sbjct: 310 GQQVVRLSWGRSPASKQ---DQSAVWS 333
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 20/125 (16%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEA 107
+ +IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A
Sbjct: 130 DHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRA 189
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP------P 161
+ ++NG + +R+S + YG +Y GYA+P P
Sbjct: 190 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGA-------AKAMYPAAGYAVPQVQPVLP 242
Query: 162 PNDPS 166
+DP+
Sbjct: 243 DSDPT 247
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+++ G + AP P S + T+++G L + L F+ GE+ SVKI K
Sbjct: 16 AARSGLSMAAAPYHQPTSLEEVR--TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNK 73
Query: 92 ------GCGFVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 126
G GF++F + E AE+ L NGT + + + RL+W
Sbjct: 74 LTSLPEGYGFIEFISHEVAEKVLQTYNGTQMPGTEHTFRLNWA 116
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 106/147 (72%), Gaps = 7/147 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 168 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 227
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+ +L+GT I
Sbjct: 228 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 287
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWS 143
G+Q VRLSWGR+PA+KQ D WS
Sbjct: 288 GQQVVRLSWGRSPASKQ---DQSAVWS 311
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 110 SIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMT 169
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP------PPN 163
++NG + +R+S + YG +Y GYA+P P +
Sbjct: 170 EMNGMYCSTRPMRISAAIPKKTTGSQLQYGA-------AKAMYPAAGYAVPQVQPVLPDS 222
Query: 164 DPS 166
DP+
Sbjct: 223 DPT 225
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 77 YNGTQMPGTEHTFRLNWA 94
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 106/147 (72%), Gaps = 7/147 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-SSQGGYASNG--APGQGP-QSEGDSSNT 56
MTEMNG+YCS+RPMRI AA P+K++G Q QY +++ Y + G P P + D +NT
Sbjct: 168 MTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNT 227
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIF+G LD NVT+++LRQ Q+GE+ VKIP K CGFVQ+A+R +AEEA+ +L+GT I
Sbjct: 228 TIFIGNLDQNVTEDELRQICVQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTI 287
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQWS 143
G+Q VRLSWGR+PA+KQ D WS
Sbjct: 288 GQQVVRLSWGRSPASKQ---DQSAVWS 311
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA+ A+
Sbjct: 110 SIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMT 169
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP------PPN 163
++NG + +R+S + YG +Y GYA+P P +
Sbjct: 170 EMNGMYCSTRPMRISAAIPKKTTGSQLQYGA-------AKAMYPAAGYAVPQVQPVLPDS 222
Query: 164 DPS 166
DP+
Sbjct: 223 DPT 225
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + L F+ GE+ SVKI K G GF++F + E AE+ L
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 77 YNGTQMPGTEHTFRLNWA 94
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 101/143 (70%), Gaps = 8/143 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+RPMRIG A +K QQY A+ P QG Q E D +NTTIFV
Sbjct: 221 MVEMNGQYCSTRPMRIGPAATKKP--LTQQYQK----ATYQNP-QGNQGENDPNNTTIFV 273
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFANR +AE+AL LNGT I Q+
Sbjct: 274 GALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTSAEQALSMLNGTQIAGQN 333
Query: 121 VRLSWGRNPANKQFRADYGNQWS 143
+RLSWGR+P+NKQ + D +QW+
Sbjct: 334 IRLSWGRSPSNKQVQPDQ-SQWN 355
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L + + L FS GEI K+ K G GF++F +R AE L
Sbjct: 70 SLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERILQT 129
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 130 YNGTPMPNSEQAFRLNWA 147
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 96
G G + + D + T+FVG L +V D L++ F Y + K+ KG GF+
Sbjct: 150 GAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFI 209
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQF-RADYGN 140
+FA+ A+ ++NG + +R+ + + P +Q+ +A Y N
Sbjct: 210 RFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLTQQYQKATYQN 256
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 114/179 (63%), Gaps = 4/179 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV SSR +RIG A +K+ G QQ YS+ G Y S + QG + D +NTTIFV
Sbjct: 268 MTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNG-YQSQSS--QGNDVQNDPNNTTIFV 324
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD N+ + LRQ F+ YGE+ VKIPVGK CGFVQF +R AEEA++ LNGT IG +
Sbjct: 325 GGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRCGFVQFTSRSCAEEAINALNGTPIGGNN 384
Query: 121 VRLSWGRNPANKQFRADYGNQWSGA-YYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAY 178
VRLSWGR+ NKQ NQ +G+ YYG Q + Y P DPSM + YG Y
Sbjct: 385 VRLSWGRSTQNKQAPQQDANQGNGSNYYGYQQGNDAYYGAPNAQDPSMQNYGYSGYGNY 443
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENA 104
D S+ TIFVG L +VTD L++ F + Y + + KG GFV+F +
Sbjct: 205 DGSDHTIFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQ 264
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPAN 131
A+ ++NG + + +R+ N N
Sbjct: 265 TRAMTEMNGVTLSSRQLRIGPAANKKN 291
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 125/199 (62%), Gaps = 20/199 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYSAPVSAVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIG 275
Query: 118 KQSVRLSWGRNPANKQ-------FRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSMYA 169
+Q +++SWG + +Q + D +QWS AYYG GQ Y+ Y Y DPS+Y
Sbjct: 276 QQVIQISWGSSMTARQDVPGGWGVQMD-PSQWS-AYYGYGQGYEAYAYG--ATQDPSIY- 330
Query: 170 AAAAAYGAYPVYGSHQQQV 188
YGAY Y + QQV
Sbjct: 331 ----TYGAYAGYAQYPQQV 345
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP 160
A+ ++NG + +R+S N F+ Y A Y Y A+
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAP--PKAMYQFPAYSAPVSAVA 206
Query: 161 PPND 164
P ND
Sbjct: 207 PEND 210
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + +Q+ RL+W
Sbjct: 71 YNGAQMPGTEQTFRLNWA 88
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-GPQSEGDSSNTTIF 59
MTEM+GVYCSSRPMRI ATP+K + QQ + Y A P E D +NTTIF
Sbjct: 166 MTEMHGVYCSSRPMRIRTATPKKQT--QQHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIF 223
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD NV+ +DL+ FS YGEI KIP G+GCGFVQF R +AEEAL +++G+VIG+Q
Sbjct: 224 VGGLDQNVSLDDLKDVFSPYGEIKYTKIPPGRGCGFVQFMTRASAEEALKQVHGSVIGQQ 283
Query: 120 SVRLSWGRNPANKQ 133
+VRLSWGR+PANKQ
Sbjct: 284 TVRLSWGRHPANKQ 297
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
GA PR ++ ++ GG ++ +IFVG L +VTD L + F
Sbjct: 79 GAVMPRTEQAFRLNWACVGG-----------DKRDSGADDSIFVGDLAADVTDAMLLETF 127
Query: 77 -SQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
S+Y + S K+ + +G GFV+F + A+ +++G + +R+
Sbjct: 128 KSRYPSVKSAKVVMDVNSGRCRGYGFVRFGDETEKSSAMTEMHGVYCSSRPMRI 181
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 123/198 (62%), Gaps = 12/198 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-----ASNGAPGQG--PQSEGDS 53
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++ Y ++ AP Q E D
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDV 234
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+ TTI V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF R +AEEA+ ++ G
Sbjct: 235 TCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQG 294
Query: 114 TVIGKQSVRLSWGRNPANKQF--RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAA 171
VIG+Q+VR+SW +NP + +AD NQW+G Y GQ YD Y Y DPS+YA
Sbjct: 295 QVIGQQAVRISWSKNPGQDGWVTQAD-PNQWNGYYGYGQGYDAYAYGA--TQDPSVYAYG 351
Query: 172 AAAYGAYPVYGSHQQQVS 189
Y YP G Q +S
Sbjct: 352 GYGYPQYPQQGEGTQDIS 369
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 23/130 (17%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 117 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 176
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYA 169
++NG + +R+S N + Y + A+ P PS A
Sbjct: 177 EMNGLYCSTRPMRISAATPKKNVGVQQQYVTK----------------AVYPVTVPSAVA 220
Query: 170 AAAAAYGAYP 179
A AY A P
Sbjct: 221 APVQAYVAPP 230
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 85 YNGTQMPGTELTFRLNWA 102
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 95/134 (70%), Gaps = 10/134 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 345
Query: 120 SVRLSWGRNPANKQ 133
+VRLSWGR+ +NKQ
Sbjct: 346 NVRLSWGRSLSNKQ 359
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 168 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 227
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 228 PTEQARAMTEMNGMPCSSRPMRI 250
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 111 LNGTVIGKQSV--RLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 147 YNGQMMPNVDLTFRLNWASAGEKRDDTPDY 176
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 95/134 (70%), Gaps = 10/134 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP-GQGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R +AE+AL L G +IG Q
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQ 345
Query: 120 SVRLSWGRNPANKQ 133
+VRLSWGR+ +NKQ
Sbjct: 346 NVRLSWGRSLSNKQ 359
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F Y + K+ KG GFV+F +
Sbjct: 168 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 227
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 228 PTEQARAMTEMNGMPCSSRPMRI 250
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 111 LNGTVIGKQSV--RLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 147 YNGQMMPNVDLTFRLNWASAGEKRDDTPDY 176
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 95/133 (71%), Gaps = 7/133 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EMNG YCS+RPMRIG A +K QQY A+ +P QG Q E D +NTTIFV
Sbjct: 219 MVEMNGQYCSTRPMRIGPAATKKP--LTQQYQK----AAYQSP-QGNQGESDPNNTTIFV 271
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LDP+VTD+ LR FS+YGE+ VKIP GK CGFVQFANR AE+AL LNGT I Q+
Sbjct: 272 GALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTCAEQALSMLNGTQIAGQN 331
Query: 121 VRLSWGRNPANKQ 133
+RLSWGR+P+NKQ
Sbjct: 332 IRLSWGRSPSNKQ 344
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFV 96
G G + + D + T+F+G L +V D L++ F Y + K+ KG GFV
Sbjct: 148 GAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYSSVKGAKVVTDRVTGRSKGYGFV 207
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFR 135
+FA+ A+ ++NG + +R+ + + P +Q++
Sbjct: 208 RFADENEQMRAMVEMNGQYCSTRPMRIGPAATKKPLTQQYQ 248
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L + + + FS GE+ K+ K G GF++F + AE L
Sbjct: 68 SLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERILQT 127
Query: 111 LNGTVI--GKQSVRLSW 125
NGT + +Q+ RL+W
Sbjct: 128 YNGTPMPNSEQTFRLNW 144
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 122/194 (62%), Gaps = 8/194 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN-GAPGQGPQS--EGDSSNTT 57
M EMNG+YCS+RPMRI AATP+K+ G QQQY ++ S AP Q + E D + TT
Sbjct: 175 MAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTT 234
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
I V LD NVT+E+L++ FSQ GE+ VKIP KG G+VQF R +AEEA+ ++ G VIG
Sbjct: 235 ISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIG 294
Query: 118 KQSVRLSWGRNPANKQF--RADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAY 175
+Q+VR+SW +NP + +AD NQW+G Y GQ YD Y Y DPS+YA Y
Sbjct: 295 QQAVRISWSKNPGQDGWVTQAD-PNQWNGYYGYGQGYDAYAYG--ATQDPSVYAYGGYGY 351
Query: 176 GAYPVYGSHQQQVS 189
YP G Q +S
Sbjct: 352 PQYPQQGEGTQDIS 365
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FSQ GE+ SVK+ K G GF++F + AE L
Sbjct: 25 TLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQT 84
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + + + RL+W
Sbjct: 85 YNGTQMPGTELTFRLNWA 102
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P+VTD L++ F Y + K+ KG GFV+FA A+
Sbjct: 117 SIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMA 176
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 177 EMNGLYCSTRPMRIS 191
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 109/168 (64%), Gaps = 9/168 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG +CS+RPMR+G A+ +K+ QQ Y PQ++GD +NTTIFV
Sbjct: 201 MTEMNGAFCSTRPMRVGLASNKKAVVGQQ-------YPKASYQNPQPQNDGDPNNTTIFV 253
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD NV D+ L++ F QYG++ VKIP GK CGFVQFA+R +AEEAL LNG + Q+
Sbjct: 254 GNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFADRSSAEEALKMLNGAQLSGQN 313
Query: 121 VRLSWGRNPANKQFRADYG-NQWSGAYYGGQVYDGYGYAIPPPNDPSM 167
+RLSWGRNP+NKQ + D YG Q Y+ YGYA P DP+M
Sbjct: 314 IRLSWGRNPSNKQAQPDANQYGGGYYGYGQQGYENYGYA-PATQDPNM 360
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG----- 90
+ N A G DS + TIFVG L +VTD L++ F + + + K+ +
Sbjct: 123 FRLNWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGR 182
Query: 91 -KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYY 147
KG GFV+F + A+ ++NG + +R+ N +A G Q+ A Y
Sbjct: 183 TKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLASNK-----KAVVGQQYPKASY 235
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + + F+ GE+ASVKI K G GF++ + AE L
Sbjct: 51 TLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAERILQT 110
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + G+Q+ RL+W
Sbjct: 111 YNGTPMPNGEQNFRLNWA 128
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 10/171 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIG 275
Query: 118 KQSVRLSWGRNPANKQFRADYGNQWSGAYYG-GQVYDGYGYAIPPPNDPSM 167
+Q +++SWG +Q +QWS AYYG GQ Y+ Y Y +DPS+
Sbjct: 276 QQVIQISWGSTLTARQMDP---SQWS-AYYGYGQGYESYAYG--ATHDPSL 320
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYG 139
A+ ++NG + +R+S N F+ Y
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYA 187
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + Q+ RL+W
Sbjct: 71 FNGAQMPGTDQTFRLNWA 88
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 105/170 (61%), Gaps = 15/170 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG Q E D +NTTIFV
Sbjct: 233 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNQGESDPTNTTIFV 283
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD +V ++DL+ F Q+GE+ VKIP GK CGFVQ+ANR AE+AL LNGT +G QS
Sbjct: 284 GALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLGGQS 343
Query: 121 VRLSWGRNPANKQFRADYG-----NQWSGAYYGGQVYDGYGYAIPPPNDP 165
+RLSWGR+P+NKQ + D Y Q Y+ YGYA PPP DP
Sbjct: 344 IRLSWGRSPSNKQTQPDQAQYGGGGGGGYYGYPPQGYEAYGYA-PPPQDP 392
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L P + + L FS G+ S K+ K G GF++F N AE L
Sbjct: 82 SLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQA 141
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NGT + Q+ RL+W + A ++ +A+
Sbjct: 142 YNGTTMPSSDQAFRLNWAQLGAGERRQAE 170
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFV 96
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 162 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFV 221
Query: 97 QFANRENAEEALHKLNGTVIGKQSVR 122
+F + A+ ++NG + +R
Sbjct: 222 RFGDESEQIRAMTEMNGQYCSSRPMR 247
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 99/146 (67%), Gaps = 13/146 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAP-------GQGP 47
M+EMNGVYCSSRPMRI AATP+K ++ Q AS P Q
Sbjct: 180 MSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAATIVPQPTIASPITPPPSLSIQSQVL 239
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ D +NTTIFVGGLD N+T+E+++Q FS GE+ SVKIP GKGC FVQ+A R +AE+A
Sbjct: 240 PPDSDPTNTTIFVGGLDLNITEEEVKQTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDA 299
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQ 133
L +L+GTVIG+Q++RLSWGR+P + +
Sbjct: 300 LQRLHGTVIGQQAIRLSWGRSPTSTK 325
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIA 83
+G Q + Q + + G G + +IFVG L P+VTD L + F +++ +
Sbjct: 90 NGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSVR 149
Query: 84 SVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
K+ + KG GFV+FA+ A+ ++NG + +R+S
Sbjct: 150 GAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRIS 196
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + LR F+ GE+ S K+ K G GF++F + AE L
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 89 YNGTQMPQTEQAFRLNWA 106
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 112/186 (60%), Gaps = 21/186 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
M+EMNGVYCS+RPMRI AATP+K++GYQQ + A AP
Sbjct: 167 MSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVP 226
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
E D +NTTI+VG LD NV++E+L+Q F Q+GEI SVK+ GK CGFVQF R +AEEA+
Sbjct: 227 PEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAI 286
Query: 109 HKLNGTVIGKQSVRLSWGR-NPANKQFRADYG-----NQWSGAY-YGGQVYDGYGYAIPP 161
K+ G ++G+Q +R+SWGR A + +G +QWS Y YG Y+ Y Y
Sbjct: 287 QKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYG--A 344
Query: 162 PNDPSM 167
DPSM
Sbjct: 345 AQDPSM 350
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------ 89
+AS G + P + D S IFVG L P+VTD L++ F + YG + K+
Sbjct: 92 WASFGIGERRPDAGPDHS---IFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGR 148
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
KG GFV+F++ A+ ++NG + +R+S
Sbjct: 149 SKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRIS 183
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L FS GE+ S+KI K G GF++F + AE L
Sbjct: 16 TLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQT 75
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 76 YNGTQMPGTEQTFRLNWA 93
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 110/177 (62%), Gaps = 28/177 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QGG A + D +N
Sbjct: 217 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGGNAG----------DSDPNN 263
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+ANR AE AL LNGT
Sbjct: 264 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANRATAEHALSVLNGTQ 323
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQV------YDGYGYAIPPPNDPS 166
+G QS+RLSWGR+P + +A QW+G Y G Y+ YGYA P DP+
Sbjct: 324 LGGQSIRLSWGRSPNKQPDQA----QWNGGGYYGYPPQPQGGYEPYGYAAQPNQDPN 376
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ V
Sbjct: 141 WAQAGAGEKRHQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTGR 198
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
KG GFV+FA+ A+ ++NG + +R+
Sbjct: 199 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRI 232
Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQ 97
G G Q+ G S ++++G L + + + F+Q GE S K+ K G GF++
Sbjct: 53 GVGSQNPG-SEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIE 111
Query: 98 FANRENAEEALHKLNGTVI--GKQSVRLSWGR 127
F N AE L NG + +Q+ RL+W +
Sbjct: 112 FINHSVAERVLQTYNGAQMPSTEQTFRLNWAQ 143
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 106/161 (65%), Gaps = 13/161 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S A+ G P ++ D +NTT+F
Sbjct: 216 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQS----AAGGVP-----TDNDPNNTTVF 266
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD +VTD+ L+ F QYGEI VKIP GK CGFVQF+ + AEEAL LNG +G
Sbjct: 267 VGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGT 326
Query: 120 SVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP 160
+VRLSWGR+P+NKQ AD + G Y GQ + YGY +P
Sbjct: 327 TVRLSWGRSPSNKQ-SADPSQFYYGGY--GQGQEQYGYTMP 364
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 153 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQ 212
Query: 105 EEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 213 IRAMTEMNGVPCSTRPMRI 231
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 112/175 (64%), Gaps = 26/175 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QG A + D +N
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGANAG----------DNDPNN 259
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN+ +AE AL LNGT
Sbjct: 260 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQ 319
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWS-GAYYG--GQVYDGYGYAI-PPPNDPS 166
+G QS+RLSWGR+P + +A QW+ G YYG Q GYGYA PP DP+
Sbjct: 320 LGGQSIRLSWGRSPNKQSDQA----QWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ +
Sbjct: 137 WAQAGAGEKRFQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 194
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
KG GFV+FA+ A+ ++NG + +R+
Sbjct: 195 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRI 228
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 44 GQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
G G Q+ G +S+ ++++G L + + + F+Q GE S K+ K G GF+
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPA-NKQFRAD 137
+F + AE L NG + +Q+ RL+W + A K+F+ +
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTE 150
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 112/175 (64%), Gaps = 26/175 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSN 55
MTEMNG YCS+RPMRIG A P + + YQ ++QG A + D +N
Sbjct: 213 MTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQ---NTQGANAG----------DNDPNN 259
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVGGLD NVTD++L+ F Q+GE+ VKIP GK CGFVQ+AN+ +AE AL LNGT
Sbjct: 260 TTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQ 319
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQWS-GAYYG--GQVYDGYGYAI-PPPNDPS 166
+G QS+RLSWGR+P + +A QW+ G YYG Q GYGYA PP DP+
Sbjct: 320 LGGQSIRLSWGRSPNKQSDQA----QWNGGGYYGYPPQPQGGYGYAAQPPTQDPN 370
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------ 89
+A GA + Q+EG + TIFVG L P VTD L F YG + K+ +
Sbjct: 137 WAQAGAGEKRFQTEG--PDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGR 194
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
KG GFV+FA+ A+ ++NG + +R+
Sbjct: 195 SKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRI 228
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 44 GQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFV 96
G G Q+ G +S+ ++++G L + + + F+Q GE S K+ K G GF+
Sbjct: 47 GIGSQNPGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFI 106
Query: 97 QFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPA-NKQFRAD 137
+F + AE L NG + +Q+ RL+W + A K+F+ +
Sbjct: 107 EFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTE 150
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 105/168 (62%), Gaps = 13/168 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+ANR AE+AL LNGT +G QS
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQS 342
Query: 121 VRLSWGRNPANKQFRADYG---NQWSGAYYGGQVYDGYGYAIPPPNDP 165
+RLSWGR+P+NKQ + D Y Q Y+ YGYA PPP DP
Sbjct: 343 IRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA-PPPQDP 389
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFV 96
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 97 QFANRENAEEALHKLNGTVIGKQSVR 122
+FA+ A+ ++NG + +R
Sbjct: 221 RFADESEQIRAMTEMNGQYCSSRPMR 246
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L P + + L F GE + K+ K G GF++F N AE L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NG + +Q+ RL+W + A ++ +A+
Sbjct: 141 YNGAPMPSSEQAFRLNWAQLGAGERRQAE 169
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 103/163 (63%), Gaps = 17/163 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 264
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ + AEEAL LNG +G
Sbjct: 265 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGT 324
Query: 120 SVRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIP 160
+VRLSWGR+P+NKQ S YYG GQ + YGY +P
Sbjct: 325 TVRLSWGRSPSNKQ-----SGDPSQFYYGGYGQGQEQYGYTMP 362
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 105 EEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 211 IRAMTEMNGVPCSTRPMRI 229
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + L F+ GE+ S K+ K G GF++FA+ AE L
Sbjct: 63 TLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQT 122
Query: 111 LNGTVI---GKQSVRLSW 125
N I Q RL+W
Sbjct: 123 FNNAPIPSFPDQLFRLNW 140
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 105/168 (62%), Gaps = 13/168 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMR G A +K Q Y + QG E D +NTTIFV
Sbjct: 232 MTEMNGQYCSSRPMRTGPAANKKPLTMQP-----ASYQNT----QGNSGESDPTNTTIFV 282
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G +D +VT++DL+ F Q+GE+ VKIP GK CGFVQ+ANR AE+AL LNGT +G QS
Sbjct: 283 GAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQS 342
Query: 121 VRLSWGRNPANKQFRADYG---NQWSGAYYGGQVYDGYGYAIPPPNDP 165
+RLSWGR+P+NKQ + D Y Q Y+ YGYA PPP DP
Sbjct: 343 IRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYA-PPPQDP 389
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFV 96
G G + + + T+FVG L P+VTD L + F + Y + K+ KG GFV
Sbjct: 161 GAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFV 220
Query: 97 QFANRENAEEALHKLNGTVIGKQSVR 122
+FA+ A+ ++NG + +R
Sbjct: 221 RFADESEQIRAMTEMNGQYCSSRPMR 246
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
++++G L P + + L F GE + K+ K G GF++F N AE L
Sbjct: 81 SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQT 140
Query: 111 LNGTVI--GKQSVRLSWGRNPANKQFRAD 137
NG + +Q+ RL+W + A ++ +A+
Sbjct: 141 YNGAPMPSSEQAFRLNWAQLGAGERRQAE 169
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 103/163 (63%), Gaps = 17/163 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 213 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 263
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ + AEEAL LNG +G
Sbjct: 264 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGT 323
Query: 120 SVRLSWGRNPANKQFRADYGNQWSGAYYG--GQVYDGYGYAIP 160
+VRLSWGR+P+NKQ S YYG GQ + YGY +P
Sbjct: 324 TVRLSWGRSPSNKQ-----SGDPSQFYYGGYGQGQEQYGYTMP 361
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 150 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQ 209
Query: 105 EEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 210 IRAMTEMNGVPCSTRPMRI 228
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 111/182 (60%), Gaps = 20/182 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------YQQQYSSQGGYASNGAPGQGPQSEGD 52
MTEMNGVYCS+RPMRI AATP+K++ + Y + Q P E D
Sbjct: 151 MTEMNGVYCSTRPMRISAATPKKTTSAYAAPAAPVPKPVYPVPAYTAPVVQVQPP--EYD 208
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NT IFVG LD NV++E+L+Q F Q+GEI SVK+ GKGCGFVQF R +AEEA+ K+
Sbjct: 209 VNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQKMQ 268
Query: 113 GTVIGKQSVRLSWGRNPANKQ-FRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDP 165
+IG+Q VR+SWGR +Q +G NQWS AYYG GQ Y+ Y Y +DP
Sbjct: 269 EKMIGQQVVRISWGRTLTARQDLPGGWGPQMDPNQWS-AYYGYGQGYEAYAYG--AAHDP 325
Query: 166 SM 167
S
Sbjct: 326 SF 327
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P++TD L++ F + Y + K+ KG GFV+F++ A+
Sbjct: 93 SIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVVSDPNTGRSKGYGFVKFSDENERNRAMT 152
Query: 110 KLNGTVIGKQSVRLS 124
++NG + +R+S
Sbjct: 153 EMNGVYCSTRPMRIS 167
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 13/177 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYS---SQGGYASNGAPGQGPQSEGDSSNTT 57
MTEMNGVYCS+RPMRI AATP+K++ +Q QY+ + + + AP E D +NTT
Sbjct: 156 MTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDVNNTT 215
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ +G LD NVT+E+L+Q F Q+G+I VKI GKG G+VQF R +AE+A+ ++ G VIG
Sbjct: 216 VCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIG 275
Query: 118 KQSVRLSWGRNPANKQ-FRADYG-----NQWSGAYYG-GQVYDGYGYAIPPPNDPSM 167
+Q +++SWG +Q +G +QWS AYYG GQ Y+ Y Y +DPS+
Sbjct: 276 QQVIQISWGSTLTARQDVPGGWGAQMDPSQWS-AYYGYGQGYESYAYG--ATHDPSL 329
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 SEGDSS-NTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFAN 100
S GDS + +IFVG L P+VTD L++ F + Y + K+ KG GFV+FA+
Sbjct: 89 SFGDSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFAD 148
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYG 139
A+ ++NG + +R+S N F+ Y
Sbjct: 149 EAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYA 187
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L V + L Q F+ GE+ S+KI K G GFV+F + +AE L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 111 LNGTVI--GKQSVRLSWG 126
NG + Q+ RL+W
Sbjct: 71 FNGAQMPGTDQTFRLNWA 88
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 99/164 (60%), Gaps = 31/164 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
M+EMNGVYCSSRPMRI AATP+K+
Sbjct: 180 MSEMNGVYCSSRPMRISAATPKKAMAAGLTTVTAATIVPQPTIASPFKAATTTTTPTYQT 239
Query: 35 GGYASNGAPGQGPQS-----EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
Y+ P QS + D +NTTIFVGGLD N+T+E+++Q FSQ GE+ SVKIP
Sbjct: 240 MPYSITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPP 299
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
GKGC FVQ+A R +AE+AL +L+GTVIG+Q++RLSWGR+P + +
Sbjct: 300 GKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGRSPTSTK 343
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIA 83
+G Q + Q + + G G + +IFVG L P+VTD L + F +++ +
Sbjct: 90 NGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFPSVR 149
Query: 84 SVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
K+ + KG GFV+FA+ A+ ++NG + +R+S
Sbjct: 150 GAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRIS 196
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + + LR F+ GE+ S K+ K G GF++F + AE L
Sbjct: 29 TLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVLLA 88
Query: 111 LNGTVI--GKQSVRLSWG 126
NGT + +Q+ RL+W
Sbjct: 89 YNGTQMPQTEQAFRLNWA 106
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M+EMNG+YCSSRPMRI AATP+K+ + Q +P Q ++ D +NTTIFV
Sbjct: 172 MSEMNGIYCSSRPMRINAATPKKAL-IPSAPAPQKVTTFATSPLQNVPNDNDPNNTTIFV 230
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLDP V++E+L++ F ++GE+ VKIP GKGCGFVQF +R AEEAL KL+GT+I +Q+
Sbjct: 231 GGLDPAVSEEELQKTFGEFGELVYVKIPPGKGCGFVQFTHRSCAEEALGKLHGTMIRQQA 290
Query: 121 VRLSWGRNPANKQFRADYG 139
+RLSWGR ANKQ+ A +G
Sbjct: 291 IRLSWGRT-ANKQYPAGWG 308
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRE 102
EG N+ IFVG L P+VTD L++ F ++Y + K+ KG GFV+FA+
Sbjct: 108 EGGPENS-IFVGDLAPDVTDYMLQETFRTRYPSVRGAKVVTDVATGRSKGYGFVRFADDS 166
Query: 103 NAEEALHKLNGTVIGKQSVRLS 124
A+ ++NG + +R++
Sbjct: 167 ERVRAMSEMNGIYCSSRPMRIN 188
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L FS GE+ S KI K G GFV+FA+ AE L
Sbjct: 21 TLWVGDLQYWMDESYLNSIFSSTGELVSAKIIRNKASGFPEGYGFVEFASHACAERVLTA 80
Query: 111 LNGTVI--GKQSVRLSWG 126
GT + +Q RL+W
Sbjct: 81 FTGTQMPQTEQLFRLNWA 98
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 95/126 (75%), Gaps = 4/126 (3%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG Q+E D +NTTIFVG LD NVTDE LRQ F QYGE+ VKIPVGK CGFVQFA+R A
Sbjct: 6 QGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCA 65
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAIPPP 162
EEAL LNGT IG Q++RLSWGR+P+NKQ +AD NQW+ G Y GQ Y+ Y YA P P
Sbjct: 66 EEALRVLNGTQIGGQNIRLSWGRSPSNKQPQAD-PNQWNGGGYYGYGQGYENYSYA-PAP 123
Query: 163 NDPSMY 168
DP+M+
Sbjct: 124 QDPNMF 129
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 105/187 (56%), Gaps = 34/187 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCS+RPMR+G AT G S+ DS+NT +FV
Sbjct: 201 MTEMNGAYCSTRPMRVGPATKMA----------------------GKYSDSDSNNTRLFV 238
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD VTDEDL++ FS YGE+ VK+ GK CGFV + NR +AEEA+ LNG+++G +
Sbjct: 239 GGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCGFVTYLNRASAEEAMRILNGSLLGDNT 298
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
+R+SWGR+ +KQ NQW+G G G GY P DP M+ Y +P
Sbjct: 299 IRISWGRSLYHKQKHDQ--NQWNGERQGS----GPGYR-SHPEDPKMH-----GYTGHPE 346
Query: 181 YGSHQQQ 187
Y + QQ
Sbjct: 347 YPHYPQQ 353
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFA 99
P + D I+VG L +VTD L F S+Y + KI KG GFV F
Sbjct: 133 PVQKRDDDGHNIYVGDLAFDVTDFMLHHVFKSRYPSVKHAKIAWDHFNGRSKGYGFVVFG 192
Query: 100 NRENAEEALHKLNGTVIGKQSVRL 123
+ +A+ ++NG + +R+
Sbjct: 193 DVNERRQAMTEMNGAYCSTRPMRV 216
>gi|242045812|ref|XP_002460777.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
gi|241924154|gb|EER97298.1| hypothetical protein SORBIDRAFT_02g034736 [Sorghum bicolor]
Length = 171
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 3/126 (2%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
QG SE D +NTT+FVGGLD NV +E LRQ F+ +GEI+ VKIPVGK CGFVQF +R A
Sbjct: 6 QGISSENDPNNTTVFVGGLDSNVNEEYLRQIFTPHGEISYVKIPVGKHCGFVQFTSRSCA 65
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSG-AYYG--GQVYDGYGYAIPP 161
EEA+ LNG+ IG Q VRLSWGR + + D +Q++G +YYG Q Y+GYGYA P
Sbjct: 66 EEAIQMLNGSQIGGQKVRLSWGRTQNRQASQQDANSQYNGNSYYGYRQQGYEGYGYAAPN 125
Query: 162 PNDPSM 167
DPSM
Sbjct: 126 TQDPSM 131
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 98/167 (58%), Gaps = 25/167 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+TEMNG YCS+RPMRIG +K+S +Q++ +S D++N+ +FV
Sbjct: 208 LTEMNGAYCSTRPMRIGPVPKKKNSFRSKQWT---------------ESYHDANNSRLFV 252
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD +VT EDL Q FS YGE+ VK GKGCGFV ++NR +AEEA+ LNG+ +G ++
Sbjct: 253 GQLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTYSNRASAEEAIRMLNGSQLGGKA 312
Query: 121 VRLSWGRNPANKQFRADYGN-------QWSGAY---YGGQVYDGYGY 157
++LSWG A+KQ + + G WS Y Y GYGY
Sbjct: 313 IKLSWGYPSADKQAQRNSGGGFGRDCFVWSPQYPYAYAQTCQPGYGY 359
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAE 105
SS+ +IFVG L NVT L F ++Y + S KI + K GFVQF + +
Sbjct: 146 SSDHSIFVGDLAYNVTGYMLHHVFKARYPSVKSAKIIFDKFTGLSKCYGFVQFGDVDEQI 205
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYY 147
+AL ++NG + +R+ P K+ + QW+ +Y+
Sbjct: 206 QALTEMNGAYCSTRPMRI----GPVPKKKNSFRSKQWTESYH 243
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 84/131 (64%), Gaps = 5/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEG---DSSNT 56
+TEM GVYC +RPMRI ATP+ K+ Y G G G PQ D +NT
Sbjct: 250 LTEMQGVYCGNRPMRIAMATPKSKNHMYSPMNMMHIGLQPVGFYG-APQPVNQFTDPTNT 308
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T+FVGGL VT+E+LR F +GEI VKIP GKGCGFVQF NR++AE A++++ G +
Sbjct: 309 TVFVGGLSGYVTEEELRFLFQNFGEIIYVKIPPGKGCGFVQFVNRQSAELAINQMQGYPL 368
Query: 117 GKQSVRLSWGR 127
GK +RLSWGR
Sbjct: 369 GKSRIRLSWGR 379
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E N + + M + G P + ++ ++S GG + EG + +IF
Sbjct: 143 FVEFNSPASAMKAMSLNGTVIPGTNRFFKLNWASGGGLHD--------RREGKTPEFSIF 194
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLN 112
VG L P VT+ L F S+Y S KI + +G GFV+F + + + AL ++
Sbjct: 195 VGDLGPEVTEPMLLSLFQSRYRSCKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQ 254
Query: 113 GTVIGKQSVRLS 124
G G + +R++
Sbjct: 255 GVYCGNRPMRIA 266
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEA 107
+N+T+++G L P +T+ ++Q ++ GE +VKI + G FV+F + +A +A
Sbjct: 96 NNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSPASAMKA 155
Query: 108 LHKLNGTVI--GKQSVRLSW-----------GRNPANKQFRADYG 139
+ LNGTVI + +L+W G+ P F D G
Sbjct: 156 M-SLNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLG 199
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 7/127 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+TEMNG+ C +RPMR+ ATP+ ++ Q++Y A A Q P D +NTT+F+
Sbjct: 27 VTEMNGILCKNRPMRVSFATPKTNN--QERYIQLALQAP--ALVQQPT---DPNNTTVFI 79
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGL VT+++LRQ F +G+I +VK+P GKGCGFVQ+ R +AE A+ K+NG +IG
Sbjct: 80 GGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISAETAIEKMNGFLIGTSR 139
Query: 121 VRLSWGR 127
+RLSWGR
Sbjct: 140 IRLSWGR 146
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 102/184 (55%), Gaps = 30/184 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNG YCSSRPMRIG AT ++ + +QG Y + + +N+ +FV
Sbjct: 192 MTEMNGAYCSSRPMRIGPAT------FKSDFRTQGTYP-----------DSNRNNSRLFV 234
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G LD VTDEDL + FS YGE+ +VKI GK CGFV +++R +AEEAL LNG+ +G
Sbjct: 235 GQLDSCVTDEDLIKAFSPYGEL-TVKIIEGKSCGFVTYSSRASAEEALTILNGSQLGDNI 293
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPV 180
+ + W R+ KQ +QW+G +G G GY P DP++ Y +P
Sbjct: 294 ITVVWARHAPKKQ------DQWNGVDHGHPQSSGPGYGC-CPEDPNI-----VGYTGHPG 341
Query: 181 YGSH 184
Y H
Sbjct: 342 YTYH 345
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 58 IFVGGLDPNVTDEDLRQPF-SQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 110
I+VGGL +VTD L F ++Y + K+ KG GFV F + +A+ +
Sbjct: 135 IYVGGLSFDVTDFMLHHVFKNRYPSVKKAKVIWNVFARRSKGYGFVVFGDVNECTQAMTE 194
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
+NG + +R+ PA F++D+ Q
Sbjct: 195 MNGAYCSSRPMRI----GPAT--FKSDFRTQ 219
>gi|125549809|gb|EAY95631.1| hypothetical protein OsI_17488 [Oryza sativa Indica Group]
Length = 263
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 87/135 (64%), Gaps = 17/135 (12%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
TIFVGGLDPNVT++ L+Q F+ YGE+ VKIPVGK CGFVQ+ NR +AE+AL L GT+I
Sbjct: 123 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLI 182
Query: 117 GKQSVRLSWGRNPANKQFRADYGNQW----------SGAYYGGQVYDGYGYAIPPPNDPS 166
G Q+VRLSWGR+ +NKQ + D NQW SG G + Y GY P DP+
Sbjct: 183 GGQNVRLSWGRSLSNKQPQHD-SNQWGAGAGAGGYYSGYGQGYEAYGGYAQ----PQDPN 237
Query: 167 MYAAAAAAYGAYPVY 181
MY AY YP Y
Sbjct: 238 MY--GYGAYAGYPNY 250
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG---DSSNTT 57
+TEM GVYC SRP+RI ATP+ G G + G G PQ D +NTT
Sbjct: 219 LTEMQGVYCGSRPIRISTATPKNKPGMSHINMMHMGMSPLGYYG-APQPMNQFTDPNNTT 277
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+ ++ G IG
Sbjct: 278 VFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAISQMQGYPIG 337
Query: 118 KQSVRLSWGRNPAN 131
VRLSWGR+ N
Sbjct: 338 NSRVRLSWGRSQNN 351
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L P V + L F S+Y S KI + +G GFV+F++ + AL
Sbjct: 161 SIFVGDLGPEVNEYLLVSLFQSRYPSCKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALT 220
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
++ G G + +R+S P NK
Sbjct: 221 EMQGVYCGSRPIRISTA-TPKNK 242
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 83/149 (55%), Gaps = 18/149 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+TEM GVYC +RPMRI ATP+ SG G G PG G S G
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYG 278
Query: 52 ---------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 279 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 338
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 339 AAEMAINQMQGYPIGNSRVRLSWGRSQNN 367
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 109
+IFVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ E+ ++AL
Sbjct: 161 SIFVGDLGPEVTEFVLVQLFQNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALT 220
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
++ G G + +R+S P NK
Sbjct: 221 EMQGVYCGNRPMRISTA-TPKNK 242
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHK 110
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL+
Sbjct: 64 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKALN- 122
Query: 111 LNGTVI--GKQSVRLSW 125
LNG +I + +L+W
Sbjct: 123 LNGQLIPNSNRPFKLNW 139
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 83/149 (55%), Gaps = 18/149 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+TEM GVYC +RPMRI ATP+ SG G G PG G S G
Sbjct: 216 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYG 275
Query: 52 ---------DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 276 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 335
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 336 AAEMAINQMQGYPIGNSRVRLSWGRSQNN 364
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 125 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------FSIFVGDLGPEVTEFVLVQLF 177
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++Y S KI P+ +G GFV+FA+ E+ ++AL ++ G G + +R+S P
Sbjct: 178 QNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTA-TP 236
Query: 130 ANK 132
NK
Sbjct: 237 KNK 239
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHK 110
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL+
Sbjct: 64 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKALN- 122
Query: 111 LNGTVI--GKQSVRLSW 125
LNG +I + +L+W
Sbjct: 123 LNGQLIPNSNRPFKLNW 139
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----GYQQQYSSQGGYASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ G G Y GAP G PQ
Sbjct: 220 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMN 279
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 280 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 339
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 340 NQMQGYPIGNSRVRLSWGRSQNN 362
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 129 GTPMPNTNRVFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 181
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 182 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTA-TP 240
Query: 130 ANK 132
NK
Sbjct: 241 KNK 243
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 41 GAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----- 94
G P P ++ G+ TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 51 GEPSAAPVAQQGNEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGY 110
Query: 95 -FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F++ A +AL LNGT + + +L+W
Sbjct: 111 CFVDFSSPAAAAKAL-SLNGTPMPNTNRVFKLNW 143
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 86/145 (59%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY-------SSQGGYASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ G Q + Q G + GAP G PQ
Sbjct: 209 LTEMQGVYCGNRPMRISTATPKNKGGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQP 268
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 269 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 328
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 329 AINQMQGYPIGNSRVRLSWGRSQNN 353
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 119 GTQIPNSNRPFKLNWASGGGLADR-RDDRGPE-------YSIFVGDLGPEVNEFVLVSLF 170
Query: 77 S-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++ S KI P+ +G GFV+FA+ + + AL ++ G G + +R+S P
Sbjct: 171 QGRFQSCKSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMRISTA-TP 229
Query: 130 ANK 132
NK
Sbjct: 230 KNK 232
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANREN 103
+ G+ + TT+++G L+P + + +R + GE +VK+ K G FV F + +
Sbjct: 51 ANGNDAKTTLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDKFNGSAGYCFVDFTSPQA 110
Query: 104 AEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
A +AL LNGT I + +L+W R D G ++S
Sbjct: 111 AAKAL-ALNGTQIPNSNRPFKLNWASGGGLADRRDDRGPEYS 151
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----GYQQQYSSQGGYASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ G G Y GAP G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 339 NQMQGYPIGNSRVRLSWGRSQNN 361
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRVFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 85/146 (58%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ--------QQYSSQGGYASNGAPGQG----PQ 48
+ EM GVYC +RPMRI ATP+ SG QQ G S GAP G PQ
Sbjct: 234 LHEMQGVYCGNRPMRISTATPKNKSGGAGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQ 293
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 294 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 353
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 354 MAINQMQGYPIGNSRVRLSWGRSQNN 379
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GQMIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 195
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++Y S KI P+ +G GFV+FA+ + ++ALH++ G G + +R+S P
Sbjct: 196 QNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMRISTA-TP 254
Query: 130 ANK 132
NK
Sbjct: 255 KNK 257
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 92/184 (50%), Gaps = 20/184 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ---GPQSEGDSSNTT 57
+ EMNGV C SR MRI A PRK P+ E N+T
Sbjct: 168 LVEMNGVPCGSRVMRISLAIPRKGVDGVGGGGVGSNTGVGSNGVGGSPAPEPE----NST 223
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+FVGGLDP +T+ DLR F +GE+ VKIP GKGCGFVQF R +AE ++ LNGT++G
Sbjct: 224 VFVGGLDPTLTEPDLRTHFEAFGELVYVKIPAGKGCGFVQFTRRADAEASIQALNGTMMG 283
Query: 118 KQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGA 177
VRLSW R+ R +G + GG Y G Y PP A A AYG
Sbjct: 284 ASRVRLSWVRSGGGGGGRH------TGPFGGGSPY-GMPYGGYPP------YAMAGAYGV 330
Query: 178 YPVY 181
P +
Sbjct: 331 DPSW 334
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T++VG L + + L F+ +G I SVKI K G GFV+F +R AE AL
Sbjct: 14 TLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATAEHALKT 73
Query: 111 LNGTVI--GKQSVRLSW 125
LNGT + Q+ RL+W
Sbjct: 74 LNGTPMPSAHQNFRLNW 90
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRENAEE 106
++ ++FVG L P V D L++ F++ Y + + ++ KG GFV+F + +
Sbjct: 107 NDHSVFVGDLPPEVNDYALQETFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDR 166
Query: 107 ALHKLNGTVIGKQSVRLS 124
AL ++NG G + +R+S
Sbjct: 167 ALVEMNGVPCGSRVMRIS 184
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 278
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 279 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 338
Query: 108 LHKLNGTVIGKQSVRLSWGRNPAN 131
++++ G IG VRLSWGR+ N
Sbjct: 339 INQMQGYPIGNSRVRLSWGRSQNN 362
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 278
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 279 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 338
Query: 108 LHKLNGTVIGKQSVRLSWGRNPAN 131
++++ G IG VRLSWGR+ N
Sbjct: 339 INQMQGYPIGNSRVRLSWGRSQNN 362
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 220 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 279
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 280 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 339
Query: 108 LHKLNGTVIGKQSVRLSWGRNPAN 131
++++ G IG VRLSWGR+ N
Sbjct: 340 INQMQGYPIGNSRVRLSWGRSQNN 363
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 129 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 181
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 182 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 240
Query: 130 ANK 132
NK
Sbjct: 241 KNK 243
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------SSGYQQQYSSQGGYASNGAPGQG----PQSE 50
++EM GVYC +RPMRI ATP+ ++G G Y GAP G PQ
Sbjct: 220 LSEMQGVYCGNRPMRISTATPKNKGPSLGAAGAMGMPGPAGMYPPMGAPPMGFYGAPQPM 279
Query: 51 G---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A
Sbjct: 280 NQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMA 339
Query: 108 LHKLNGTVIGKQSVRLSWGRNPAN 131
++++ G IG VRLSWGR+ N
Sbjct: 340 INQMQGYPIGNSRVRLSWGRSQNN 363
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 129 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 181
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 182 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 240
Query: 130 ANK 132
NK
Sbjct: 241 KNK 243
>gi|413919586|gb|AFW59518.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 329
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 70/103 (67%), Gaps = 10/103 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIF 59
MTEMNG+ CSSRPMRIG A RK++G G P QG QSE D +NTTIF
Sbjct: 235 MTEMNGMPCSSRPMRIGPAASRKNAG---------GVVQERVPNSQGAQSENDPNNTTIF 285
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
VGGLDPNVT++ L+Q FS YGE+ VKIPVGK CGFVQF R
Sbjct: 286 VGGLDPNVTEDVLKQAFSPYGEVIHVKIPVGKRCGFVQFVTRR 328
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY------GEIASVKIPV-GKGCGFVQFAN 100
+ D+ + TIFVG L +VTD L++ F + ++ + K+ + KG GFV+F +
Sbjct: 168 EKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKGYGFVKFGD 227
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 228 PTEQARAMTEMNGMPCSSRPMRI 250
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEALHK 110
T+++G L + D + FS GE+ +VK+ K G GFV+F +R AE L
Sbjct: 87 TLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIRDKNSGQLQGYGFVEFTSRAAAERVLQT 146
Query: 111 LNGTVIGKQSV--RLSWGRNPANKQFRADY 138
NG ++ + RL+W + DY
Sbjct: 147 YNGQMMPNVDLTFRLNWASAGEKRDDTPDY 176
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 80/132 (60%), Gaps = 17/132 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSE-GDSSNTTIF 59
+TEM GVYC +RPMRI ATP+ S A G P ++ D +NTT+F
Sbjct: 195 LTEMQGVYCGNRPMRISTATPKNKS----------------ATGGPPMNQFTDPNNTTVF 238
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
VGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A++++ G IG
Sbjct: 239 VGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 298
Query: 120 SVRLSWGRNPAN 131
VRLSWGR+ N
Sbjct: 299 RVRLSWGRSQNN 310
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 21 PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQY 79
P S ++ ++S GG A +GP+ +IFVG L P V + L F S++
Sbjct: 109 PGSSRPFKLNWASGGGLADR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLFQSRF 160
Query: 80 GEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 132
S KI PV +G GFV+F++ + + AL ++ G G + +R+S P NK
Sbjct: 161 PSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALTEMQGVYCGNRPMRISTA-TPKNK 218
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANRENAE 105
G + TT+++G L+P + + +R + Q GE +VK+ K G FV F++ A
Sbjct: 39 GSDAKTTLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIRDKFSGNAGYCFVDFSSPAAAA 98
Query: 106 EALHKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
+AL LN T I + +L+W R D G ++S
Sbjct: 99 KAL-TLNATPIPGSSRPFKLNWASGGGLADRRDDRGPEYS 137
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 28/159 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG----YQQQYSSQ---------------------- 34
+ EM GVYC +RPMRI ATP+ S YQQ + +Q
Sbjct: 211 LVEMQGVYCGNRPMRISTATPKNRSNHGGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQY 270
Query: 35 -GGY-ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
G Y A PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 271 GGAYGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 330
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
CGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 331 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 369
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 13/97 (13%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P V + L F +++ S KI +G GFV+F + ++ + AL
Sbjct: 153 SIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALV 212
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQ-----FRADYGNQ 141
++ G G + +R+S P N+ ++ +GNQ
Sbjct: 213 EMQGVYCGNRPMRISTA-TPKNRSNHGGPYQQHHGNQ 248
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
+ MNGVYCSSRPMR+ AT R K+ G S Y G +E + +NTT+F
Sbjct: 155 LQTMNGVYCSSRPMRVSVATDRTKTRGIMPPPIS---YTVVGTG----NTEEEGANTTVF 207
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
+GGLDP+ T++DLR F GEI SVK+P G+GCGFVQ+ ++ A+ A++++NG +I
Sbjct: 208 IGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAINQMNGALINGV 267
Query: 120 SVRLSWGRNPANK 132
VR +WGR+ A +
Sbjct: 268 KVRCAWGRSAAAR 280
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L P V+DE L FS ++ + K+ + KG GFV+F ++ A++AL
Sbjct: 97 SIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQ 156
Query: 110 KLNGTVIGKQSVRLS 124
+NG + +R+S
Sbjct: 157 TMNGVYCSSRPMRVS 171
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
+TEM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 339 NQMQGYPIGNSRVRLSWGRSQNN 361
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRVFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QNRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 28/159 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG---YQQQYS------------SQGGY-------- 37
+ EM GVYC +RPMRI ATP+ + YQQQ+ QG Y
Sbjct: 211 LVEMQGVYCGNRPMRISTATPKNRNHGGPYQQQHHGNQMMAPGLPPHQQGFYGVPSPAQY 270
Query: 38 -----ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
A PGQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 271 GGAYGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 330
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
CGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 331 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 369
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E +S+ + + G+ P + ++ ++S GG ++ +GP+ +IF
Sbjct: 104 FVEFTSSEAASKALTLNGSPVPNSNRAFKLNWASGGGI-NDRRDDRGPE-------YSIF 155
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLN 112
VG L P V + L F +++ S KI +G GFV+F + ++ + AL ++
Sbjct: 156 VGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQ 215
Query: 113 GTVIGKQSVRLSWGRNPANKQFRADYGNQWSG 144
G G + +R+S P N+ Y Q G
Sbjct: 216 GVYCGNRPMRISTA-TPKNRNHGGPYQQQHHG 246
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA----------SNGAPGQG---- 46
+TEM GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 224 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGA 283
Query: 47 PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 284 PQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHA 343
Query: 104 AEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 344 AEMAINQMQGYPIGNSRVRLSWGRSQNN 371
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 133 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------YSIFVGDLGPEVTEFVLVQLF 185
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++Y S KI P+ +G GFV+FA+ E+ ++AL ++ G G + +R+S P
Sbjct: 186 QNKYPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTA-TP 244
Query: 130 ANK 132
NK
Sbjct: 245 KNK 247
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHK 110
TT+++G L+P + + +R + GE +VK+ K G FV F++ + A +AL
Sbjct: 72 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFSSPDAAAKAL-T 130
Query: 111 LNGTVI--GKQSVRLSW 125
LNG +I + +L+W
Sbjct: 131 LNGQLIPNSNRPFKLNW 147
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 89/156 (57%), Gaps = 28/156 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN--------------GAP--- 43
+ EM GVYC +RPMRI ATP+ S QY G +N GAP
Sbjct: 192 LVEMQGVYCGNRPMRISTATPKTRS---HQYGGAHGQGANPMIPPVPGHPGPMWGAPAYY 248
Query: 44 GQG-------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
GQG P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 249 GQGAAFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 308
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 309 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 344
Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 28/168 (16%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 102 GTPVPNSTRVFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEFVLVSLF 153
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 154 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADQQRALVEMQGVYCGNRPMRISTA-TP 212
Query: 130 ANKQFRADYGNQWSGAYYGGQVYDGYGYAIPP-PNDPSMYAAAAAAYG 176
+ + YGG G IPP P P A A YG
Sbjct: 213 KTRSHQ-----------YGGAHGQGANPMIPPVPGHPGPMWGAPAYYG 249
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 217 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 276
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 277 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 336
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 337 NQMQGYPIGNSRVRLSWGRSQNN 359
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 126 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 178
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 179 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 237
Query: 130 ANK 132
NK
Sbjct: 238 KNK 240
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYC 108
Query: 95 FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F++ A +AL LNGT + + +L+W
Sbjct: 109 FVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNW 140
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 77/116 (66%), Gaps = 15/116 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNGVYCSSRPMR+ AT R S QG + GAP E + +NTT+FV
Sbjct: 155 LQTMNGVYCSSRPMRVSVATERSKS------RQQGAF---GAP------EEEGTNTTVFV 199
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
GGLDP+ T+++LR F GEI SVK+P G+GCGFVQ+ ++E AE A+ ++NGTVI
Sbjct: 200 GGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAITQMNGTVI 255
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 10/91 (10%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGC 93
GA G+ ++ D S IFVG L P+VTDE L F S++ + K+ PV KG
Sbjct: 84 GAGGRRIETSDDHS---IFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGF 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
GFV+F ++E A++AL +NG + +R+S
Sbjct: 141 GFVRFGSKEEADQALQTMNGVYCSSRPMRVS 171
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 217 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 276
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 277 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 336
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 337 NQMQGYPIGNSRVRLSWGRSQNN 359
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 126 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 178
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 179 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 237
Query: 130 ANK 132
NK
Sbjct: 238 KNK 240
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYC 108
Query: 95 FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F++ A +AL LNGT + + +L+W
Sbjct: 109 FVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNW 140
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 86/153 (56%), Gaps = 22/153 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATP--RKSSGYQQQYSSQGGYASNGAPGQ------------- 45
+ EM GVYC +RPMRI ATP R + G+ Q GG G P Q
Sbjct: 196 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHHNGGPMMGGMPQQQMWNGGGMQGFGY 255
Query: 46 ---GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 256 GGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 315
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+R AE A++++ G IG VRLSWGR+ N
Sbjct: 316 VHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 348
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 106 GKPVPNSQRSFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 157
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 158 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS----T 213
Query: 130 ANKQFRADYGNQWSGAYYGGQVYDG 154
A + R ++G G + GG + G
Sbjct: 214 ATPKNRGNHGFGGQGHHNGGPMMGG 238
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 218 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 277
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 278 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 337
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 338 NQMQGYPIGNSRVRLSWGRSQNN 360
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 238
Query: 130 ANK 132
NK
Sbjct: 239 KNK 241
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
G P P TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 49 GEPTAAPVQPAQEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGY 108
Query: 95 -FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F++ A +AL LNGT + + +L+W
Sbjct: 109 CFVDFSSPAAAAKAL-SLNGTPMPNTNRLFKLNW 141
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 241 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 300
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 301 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 360
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 361 NQMQGYPIGNSRVRLSWGRSQNN 383
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 150 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 202
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 203 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRIS-TATP 261
Query: 130 ANK 132
NK
Sbjct: 262 KNK 264
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 82/143 (57%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG---------GYASNGAPGQGPQSEG 51
+ EM GVYC +RPMRI ATP+ +Q GYA AP Q
Sbjct: 193 LVEMQGVYCGNRPMRISTATPKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFNPMQPMN 252
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R AE A+
Sbjct: 253 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAI 312
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 313 NQMQGYPIGNSRVRLSWGRSQNN 335
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P V + L F S++ S KI +G GFV+F++ + + AL
Sbjct: 135 SIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRALV 194
Query: 110 KLNGTVIGKQSVRLS 124
++ G G + +R+S
Sbjct: 195 EMQGVYCGNRPMRIS 209
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 82/134 (61%), Gaps = 7/134 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQGGYASNGAPGQGPQ----SEGDSS 54
+ EM+G+YC SRPMRI AT + +SG YS Q S P Q + D
Sbjct: 170 LIEMHGLYCLSRPMRISPATAKFKPASGVSLDYS-QAPPFSAPLPNVDNQPVTLTSNDPY 228
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+ G
Sbjct: 229 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 288
Query: 115 VIGKQSVRLSWGRN 128
IG +RLSWGR+
Sbjct: 289 PIGGSRIRLSWGRS 302
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 86/151 (56%), Gaps = 20/151 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-------------GYASNGAPGQG- 46
+TEM GVYC +RPMRI ATP+ SG + G G S GAP G
Sbjct: 226 LTEMQGVYCGNRPMRISTATPKNKSGGGGPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGY 285
Query: 47 ---PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 286 YGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQ 345
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
R AE A++++ G IG VRLSWGR+ N
Sbjct: 346 RHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 376
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 136 GSMIPNTSRPFKLNWASGGGLADR-RDDRGPE-------FSIFVGDLGPEVNEYVLVSLF 187
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 188 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTA-TP 246
Query: 130 ANK 132
NK
Sbjct: 247 KNK 249
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQF 98
GQG + S TT+++G L+P + + +R + GE +VK+ K G F+ F
Sbjct: 63 GQGGSTGAADSKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDF 122
Query: 99 ANRENAEEALHKLNGTVIGKQS--VRLSWGRNPANKQFRADYGNQWS 143
E A +AL LNG++I S +L+W R D G ++S
Sbjct: 123 TTPEAAAKAL-SLNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFS 168
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 89/162 (54%), Gaps = 33/162 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY----------------------- 37
+ EM GVYC +RPMRI ATP+ S QQYS+QG +
Sbjct: 195 LLEMQGVYCGNRPMRISTATPKTRS--HQQYSAQGQHGGPMPMAAPAQQQNMNWGMPYGF 252
Query: 38 -------ASNGAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
A+N P ++ D +NTT+FVGGL VT+++LR F +G+I VKIP
Sbjct: 253 NQPAPPAANNFNAAMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPP 312
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GKGCGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 313 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 354
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E N +++ +++ G+ P ++ ++S GG +GP+ +IF
Sbjct: 88 FVEFNSAEAANKALQLNGSPVPNSQRVFKLNWASGGGLVDR-RDERGPE-------FSIF 139
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLN 112
VG L P V + L F +++ S KI +G GFV+F + + + AL ++
Sbjct: 140 VGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQ 199
Query: 113 GTVIGKQSVRLS 124
G G + +R+S
Sbjct: 200 GVYCGNRPMRIS 211
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----YASNGAPGQG----PQSEG 51
++EM GVYC +RPMRI ATP+ Y GAP G PQ
Sbjct: 219 LSEMQGVYCGNRPMRISTATPKNKGPGVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMN 278
Query: 52 ---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE A+
Sbjct: 279 QFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAI 338
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+++ G IG VRLSWGR+ N
Sbjct: 339 NQMQGYPIGNSRVRLSWGRSQNN 361
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRLFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----------YASNGAPGQG--- 46
+TEM GVYC +RPMRI ATP+ SG G Y+ N P G
Sbjct: 235 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYG 294
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 295 TPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 354
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 355 AAEMAINQMQGYPIGNSRVRLSWGRSQNN 383
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 109
++FVG L P VT+ L Q F ++Y S KI P+ +G GFV+FA+ ++ ++AL
Sbjct: 177 SVFVGDLGPEVTEFVLVQLFQNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALT 236
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
++ G G + +R+S P NK
Sbjct: 237 EMQGVYCGNRPMRISTA-TPKNK 258
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKAL- 123
Query: 110 KLNGTVI--GKQSVRLSW 125
LNG++I + +L+W
Sbjct: 124 SLNGSLIPNSNRPFKLNW 141
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 82/151 (54%), Gaps = 20/151 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY--------------------QQQYSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ + QQ ++ G+
Sbjct: 202 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGG 261
Query: 41 GAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 262 FNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 321
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
R AE A++++ G IG VRLSWGR+ N
Sbjct: 322 RHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 352
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 112 GTPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 163
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 164 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 218
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-----------YASNGAPGQG--- 46
+TEM GVYC +RPMRI ATP+ SG G Y+ N P G
Sbjct: 216 LTEMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMPQGGGGPGMGMYSMNAPPMGGYYG 275
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 276 TPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 335
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 336 AAEMAINQMQGYPIGNSRVRLSWGRSQNN 364
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 17/123 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P + ++ ++S GG A +GP+ ++FVG L P VT+ L Q F
Sbjct: 127 GSLIPNSNRPFKLNWASGGGLADRRQ--RGPE-------FSVFVGDLGPEVTEFVLVQLF 177
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++Y S KI P+ +G GFV+FA+ ++ ++AL ++ G G + +R+S P
Sbjct: 178 QNKYASTKSAKIMSDPISGMSRGYGFVRFASEDDQQKALTEMQGVYCGNRPMRISTA-TP 236
Query: 130 ANK 132
NK
Sbjct: 237 KNK 239
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALH 109
TT+++G L+P + + +R + GE +VK+ K G FV FA+ + A +AL
Sbjct: 65 TTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGSNAGYCFVDFASPDAAAKALG 124
Query: 110 KLNGTVI--GKQSVRLSW 125
LNG++I + +L+W
Sbjct: 125 -LNGSLIPNSNRPFKLNW 141
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 84/156 (53%), Gaps = 28/156 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA------------------ 42
+ EM GVYC +RPMRI ATP+ + QY + +A+N
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANAMMAPVPAHAANMQWGVPPQ 251
Query: 43 -------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 252 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 311
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 312 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 347
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 105 GTPVPNSNRAFKLNWASGGGLIDR-RDDRGPEY-------SIFVGDLGPEVNEFVLVSLF 156
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
S++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 157 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 211
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 28/156 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 227 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 283
Query: 46 G---------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 284 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 343
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 344 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 379
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG + + +IFVG L P V + L F
Sbjct: 137 GTPVPNSNRAFKLNWASGGGLID--------RRDDRGPEYSIFVGDLGPEVNEFVLVSLF 188
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
S++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 189 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 243
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQP 277
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 338 AINQMQGYPIGNSRVRLSWGRSQNN 362
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 238
Query: 130 ANK 132
NK
Sbjct: 239 KNK 241
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG---- 94
++G P +G + TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 48 ASGEPAPSSAQQGGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAG 107
Query: 95 --FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F A +AL L+GT I ++ +L+W
Sbjct: 108 YCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 28/156 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 251
Query: 46 G---------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 252 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 311
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 312 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 347
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG + + +IFVG L P V + L F
Sbjct: 105 GTPVPNSNRAFKLNWASGGGLID--------RRDDRGPEYSIFVGDLGPEVNEFVLVSLF 156
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
S++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 157 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 211
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 28/156 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------------GAPGQ 45
+ EM GVYC +RPMRI ATP+ + QY + +A+N G P Q
Sbjct: 195 LVEMQGVYCGNRPMRISTATPKTRT---HQYGAHAPHAANPMMAPVPAHATNLQWGVPPQ 251
Query: 46 G---------PQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 252 PYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 311
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 312 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 347
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG + + +IFVG L P V + L F
Sbjct: 105 GTPVPNSNRAFKLNWASGGGLID--------RRDDRGPEYSIFVGDLGPEVNEFVLVSLF 156
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
S++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 157 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRALVEMQGVYCGNRPMRIS 211
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 83/151 (54%), Gaps = 20/151 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-------------SNGAPGQG- 46
+ EM GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 225 LHEMQGVYCGNRPMRISTATPKNKSGAGGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGY 284
Query: 47 ---PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 285 YGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQ 344
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
R AE A++++ G IG VRLSWGR+ N
Sbjct: 345 RHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 375
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 16/131 (12%)
Query: 10 SSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVT 68
++R +++ G P + ++ ++S GG A +GP+ +IFVG L P V
Sbjct: 126 ATRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------FSIFVGDLGPEVN 178
Query: 69 DEDLRQPFS-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
+ L F +Y S KI P+ +G GFV+FA+ ++ ++ALH++ G G + +
Sbjct: 179 EYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPM 238
Query: 122 RLSWGRNPANK 132
R+S P NK
Sbjct: 239 RISTA-TPKNK 248
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQ---------------------QYSSQGGYAS 39
+ EM GVYC +RPMRI ATP++ S + Q + + Y
Sbjct: 193 LVEMQGVYCGNRPMRISTATPKQRSHHHQYGHHPPAPMMPPVPGHPAAPPMWGNYPYYGQ 252
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 253 QYNPIQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 312
Query: 100 NRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+R AE A++++ G IG VRLSWGR+ N
Sbjct: 313 HRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 344
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 103 GTPVPNSNRVFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEFVLVSLF 154
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 155 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEADMQRALVEMQGVYCGNRPMRISTA-TP 213
Query: 130 ANKQFRADYGNQ 141
+ YG+
Sbjct: 214 KQRSHHHQYGHH 225
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 82/146 (56%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 338 MAINQMQGYPIGNSRVRLSWGRSQNN 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 238
Query: 130 ANK 132
NK
Sbjct: 239 KNK 241
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 42 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 93 CG------FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
G FV F++ A +AL L+GT I ++ +L+W
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 83/155 (53%), Gaps = 24/155 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG-----------------YQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ SG G S GAP
Sbjct: 236 LHEMQGVYCGNRPMRISTATPKNKSGGAAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAP 295
Query: 44 GQG----PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
G PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 296 PMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 355
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
QF R AE A++++ G IG VRLSWGR+ N
Sbjct: 356 QFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 390
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 145 GQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 197
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++Y S KI P+ +G GFV+FA+ ++ ++ALH++ G G + +R+S P
Sbjct: 198 QNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMRISTA-TP 256
Query: 130 ANK 132
NK
Sbjct: 257 KNK 259
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 84/146 (57%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSSQGGYASN------GAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ SG Q G + G P G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQ 278
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 279 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 338
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 339 MAINQMQGYPIGNSRVRLSWGRSQNN 364
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG + E + +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRPFKLNWATGGGLSDR-------SREDRTPEYSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 82/146 (56%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 338 MAINQMQGYPIGNSRVRLSWGRSQNN 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 238
Query: 130 ANK 132
NK
Sbjct: 239 KNK 241
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 42 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 93 CG------FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
G FV F++ A +AL L+GT I ++ +L+W
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 84/146 (57%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS--SGYQQQYSSQGGYASN------GAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ SG Q G + G P G PQ
Sbjct: 219 LTEMQGVYCGNRPMRISTATPKNKGPSGAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQ 278
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 279 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 338
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 339 MAINQMQGYPIGNSRVRLSWGRSQNN 364
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG + E + +IFVG L P V + L F
Sbjct: 128 GTPMPNTNRPFKLNWATGGGLSDR-------SREDRTPEYSIFVGDLGPEVNEYVLVSLF 180
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 181 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 239
Query: 130 ANK 132
NK
Sbjct: 240 KNK 242
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 82/146 (56%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG--------YASNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ + G Y G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 337
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 338 MAINQMQGYPIGNSRVRLSWGRSQNN 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 238
Query: 130 ANK 132
NK
Sbjct: 239 KNK 241
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
Query: 42 APGQGPQS---------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
AP QGP S +G + TT+++G L+P + + +R + Q GE +VK+ K
Sbjct: 42 APFQGPASGEAASGSAQQGGDAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKF 101
Query: 93 CG------FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
G FV F++ A +AL L+GT I ++ +L+W
Sbjct: 102 SGSNAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-----------SNGAPGQG--- 46
+T+M GVYC +RPMRI ATP+ SG G S GAP G
Sbjct: 213 LTDMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYG 272
Query: 47 -PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 273 APQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRH 332
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 333 AAEMAINQMQGYPIGNSRVRLSWGRSQNN 361
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P VT+ L Q F
Sbjct: 122 GQLIPNSNRPFKLNWASGGGLADRSRDERGPE-------YSIFVGDLGPEVTEFVLVQLF 174
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
++Y S KI P+ +G GFV+FA+ + ++AL + G G + +R+S P
Sbjct: 175 QNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTA-TP 233
Query: 130 ANK 132
NK
Sbjct: 234 KNK 236
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 25 SGYQQQYSSQGGYASNGAPGQG----PQSEG-----DSSNTTIFVGGLDPNVTDEDLRQP 75
SG Q Q + NG P QG P S G + TT+++G L+P + + +R
Sbjct: 21 SGSQPDLGQQMDPSGNGFPPQGNMGPPGSAGGDGQPSAGKTTLWMGELEPWIDENFVRSI 80
Query: 76 FSQYGEIASVKIPVGKGCG-----FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
+ GE +VK+ K G FV F+ E A +AL LNG +I + +L+W
Sbjct: 81 WYNMGETVNVKMIRDKFSGNAGYCFVDFSTPEAAAKAL-SLNGQLIPNSNRPFKLNW 136
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 232 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 291
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 292 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 351
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 352 AINQMQGYPIGNSRVRLSWGRSQNN 376
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 141 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 193
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 194 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 252
Query: 130 ANK 132
NK
Sbjct: 253 KNK 255
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 277
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 278 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 337
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 338 AINQMQGYPIGNSRVRLSWGRSQNN 362
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 127 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 179
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 180 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 238
Query: 130 ANK 132
NK
Sbjct: 239 KNK 241
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG---- 94
++G P G + + TT+++G L+P + + +R + Q GE +VK+ K G
Sbjct: 48 ASGEPASGSAQQAGEAKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAG 107
Query: 95 --FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F A +AL L+GT I ++ +L+W
Sbjct: 108 YCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNW 141
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG-------YASNGAPGQG----PQS 49
+TEM GVYC +RPMRI ATP+ + + G P G PQ
Sbjct: 242 LTEMQGVYCGNRPMRISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQP 301
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 302 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 361
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 362 AINQMQGYPIGNSRVRLSWGRSQNN 386
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 151 GTPIPNTSRTFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 203
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 204 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 262
Query: 130 ANK 132
NK
Sbjct: 263 KNK 265
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG---YQQQYSSQGGYASNGAPGQGPQSEGDSSNTT 57
+ EMNGV+ SSRP+R+ AT R+ G S G G G G E D +NTT
Sbjct: 63 VVEMNGVFISSRPVRVSVATARRIDGGPLVPGGGSRVPGSGPGGGGGGGALGEADPNNTT 122
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+F+GGL VT++ LR F +YGEI KIP GKGCGFVQF +R+ AE A+ ++NG +IG
Sbjct: 123 LFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQEVNGQIIG 182
Query: 118 KQSVRLSWGRN 128
SVR+SWG++
Sbjct: 183 GSSVRISWGKS 193
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG-EIASVKI---PV---GKGCGFVQFANRENAE 105
+++ ++FVG L P V D L F QY + S K+ PV KG GFV+F + +
Sbjct: 1 AADFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMTDPVTGRSKGYGFVRFGSEAERD 60
Query: 106 EALHKLNGTVIGKQSVRLS 124
A+ ++NG I + VR+S
Sbjct: 61 RAVVEMNGVFISSRPVRVS 79
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 85/157 (54%), Gaps = 26/157 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----GYQQQYSSQGGYASNGA------------- 42
+ EM GVYC +RPMRI ATP+ S G Q+ G A
Sbjct: 194 LVEMQGVYCGNRPMRISTATPKTRSHQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGY 253
Query: 43 --PGQGPQSE------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
PG GP + D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 254 YQPGFGPMAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 313
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
FVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 314 FVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 350
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E N +++ + + G+ P + ++ ++S GG + + S +IF
Sbjct: 87 FVEFNTADAATKALTLNGSPVPNSTRAFKLNWASGGGLVD--------RRDDRSPEFSIF 138
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLN 112
VG L P V + L F +++ S KI +G GFV+F++ + + AL ++
Sbjct: 139 VGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQ 198
Query: 113 GTVIGKQSVRLS 124
G G + +R+S
Sbjct: 199 GVYCGNRPMRIS 210
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 85/155 (54%), Gaps = 31/155 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG---------------- 44
+TEM GVYC +RPMRI ATP K+ G Q A+ G PG
Sbjct: 216 LTEMQGVYCGNRPMRISTATP-KNKGLPMQG------ANMGMPGPAGPMGYPPMGGPPMP 268
Query: 45 -----QGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
Q PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 269 YYGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 328
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
QF R AE A++++ G IG VRLSWGR+ N
Sbjct: 329 QFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 363
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L P V + L F S++ S KI + +G GFV+F++ + + AL
Sbjct: 158 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPLSGMSRGYGFVRFSDEGDQQRALT 217
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
++ G G + +R+S P NK
Sbjct: 218 EMQGVYCGNRPMRISTA-TPKNK 239
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----- 94
N AP G G TT+++G L+P + + +R + Q GE SVK+ K G
Sbjct: 51 NAAPQPG---SGGEQKTTLWMGELEPWIDENFVRNLWFQMGEQVSVKMIRDKFSGSNAGY 107
Query: 95 -FVQFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
FV F++ + A +AL +L+G + + +L+W R D G ++S
Sbjct: 108 CFVDFSSPQAAAKAL-QLSGQPMPNSTRPFKLNWATGGGLADRRDDRGPEYS 158
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 87/156 (55%), Gaps = 25/156 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQ-----------------------GG 36
+ EM GVYC +RPMRI ATP+ ++ G Q + +Q G
Sbjct: 209 LVEMQGVYCGNRPMRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGA 268
Query: 37 Y-ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
Y A PGQ D +NTT+FVGGL VT+++LR F +GEI V+IP GKGCGF
Sbjct: 269 YGAPYNPPGQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGF 328
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 329 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 364
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGKGCG-----FVQ 97
GQ P +GD++ T+++G L+P + + ++ F + GE +VK+ K G FV+
Sbjct: 46 GQAP-IQGDANKNTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIRDKTSGNAGYCFVE 104
Query: 98 FANRENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRADYGNQWS 143
F + + A +AL +LNGT + ++ +L+W R D G ++S
Sbjct: 105 FTSSDAASKAL-QLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYS 151
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E +S+ +++ G P + ++ ++S GG ++ +GP+ +IF
Sbjct: 102 FVEFTSSDAASKALQLNGTPVPNSNRAFKLNWASGGGI-NDRRDDRGPE-------YSIF 153
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLN 112
VG L P V + L F +++ S KI +G GFV+F + ++ + AL ++
Sbjct: 154 VGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQ 213
Query: 113 GTVIGKQSVRLS 124
G G + +R+S
Sbjct: 214 GVYCGNRPMRIS 225
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 85/153 (55%), Gaps = 22/153 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY------------------QQQYSSQGGYASNGA 42
+ EM GVYC +RPMRI ATP+ + QQQ + GG
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPY 260
Query: 43 PGQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 261 GGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF 320
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+R AE A++++ G IG VRLSWGR+ N
Sbjct: 321 VHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 353
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 111 GSQVPNSSRSFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 162
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 163 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 217
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 332 AINQMQGYPIGNSRVRLSWGRSQNN 356
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A G +GP+ +IFVG L P V + L F
Sbjct: 121 GTPMPNTTRAFKLNWATGGGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLF 173
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 174 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 232
Query: 130 ANK 132
NK
Sbjct: 233 KNK 235
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQ----GPQSEGDSSNTTIFVGGLDPNVTDEDL 72
GA TP ++ Q S +A G PG+ PQ GD TT+++G L+P + + +
Sbjct: 19 GAPTPADTNMTGQADPSPAPFA--GTPGEPSAAAPQQGGDGK-TTLWMGELEPWIDENFI 75
Query: 73 RQPFSQYGEIASVKIPVGKGCG------FVQFANRENAEEALHKLNGTVI--GKQSVRLS 124
R + Q GE +VK+ K G FV F++ A +AL LNGT + ++ +L+
Sbjct: 76 RNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSAAAAGKAL-SLNGTPMPNTTRAFKLN 134
Query: 125 W 125
W
Sbjct: 135 W 135
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 84/154 (54%), Gaps = 23/154 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-----------------GYQQQYSSQGGYASNGAP 43
+ EM GVYC +RPMRI ATP+ G QQ G G P
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFP 260
Query: 44 --GQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
G P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQ
Sbjct: 261 YGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQ 320
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
F +R AE A++++ G IG VRLSWGR+ N
Sbjct: 321 FVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 354
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 111 GSQVPNSSRSFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 162
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 163 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 217
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 89/163 (54%), Gaps = 34/163 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS---NGAPG------------- 44
+ EM GVYC +RPMRI ATP+ S QQY +QG + + N P
Sbjct: 199 LVEMQGVYCGNRPMRISTATPKTRS--HQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGY 256
Query: 45 QGPQSE----------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
Q PQ+ D +NTT+FVGGL VT+++LR F +G+I VKIP
Sbjct: 257 QQPQAPPPNTAFNNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIP 316
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GKGCGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 317 PGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
+IFVG L P V + L F +++ S KI +G GFV+F + + + AL
Sbjct: 141 SIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALV 200
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
++ G G + +R+S P + + YGNQ
Sbjct: 201 EMQGVYCGNRPMRISTA-TPKTRSHQ-QYGNQ 230
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 332 AINQMQGYPIGNSRVRLSWGRSQNN 356
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A G +GP+ +IFVG L P V + L F
Sbjct: 121 GTPMPNTTRAFKLNWATGGGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLF 173
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 174 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 232
Query: 130 ANK 132
NK
Sbjct: 233 KNK 235
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 83/147 (56%), Gaps = 16/147 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN---------GAPGQG----P 47
+ EM GVYC +RPMRI ATP+ SG GG GAP G P
Sbjct: 127 LNEMQGVYCGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAP 186
Query: 48 QSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R A
Sbjct: 187 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 246
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPAN 131
E A++++ G IG VRLSWGR+ N
Sbjct: 247 EMAINQMQGYPIGNSRVRLSWGRSQNN 273
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 37 YASNGAPGQGPQSEGDSS--NTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKI---PVG 90
+ N A G G Q D +IFVG L P V + L F +Y S KI P+
Sbjct: 47 FKLNWASGGGLQDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPIS 106
Query: 91 ---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 132
+G GFV+F++ + AL+++ G G + +R+S P NK
Sbjct: 107 GMSRGYGFVRFSDESEQQRALNEMQGVYCGNRPMRISTA-TPKNK 150
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-------ASNGAPGQG----PQS 49
++EM GVYC +RPMRI ATP+ A+ G P G PQ
Sbjct: 212 LSEMQGVYCGNRPMRISTATPKNKGPGVGPGGMGMPGPAGIYPPAAMGGPPMGFYGAPQP 271
Query: 50 EG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEE 106
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 272 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEM 331
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 332 AINQMQGYPIGNSRVRLSWGRSQNN 356
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A G +GP+ +IFVG L P V + L F
Sbjct: 121 GTPMPNTTRAFKLNWATGGGLADRGRDERGPE-------YSIFVGDLGPEVNEYVLVSLF 173
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 174 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTA-TP 232
Query: 130 ANK 132
NK
Sbjct: 233 KNK 235
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 85/155 (54%), Gaps = 27/155 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------G 44
+ EM GVYC +R MRI ATP+ S Q+ G A+ P G
Sbjct: 193 LVEMQGVYCGNRAMRISTATPKSRS---HQFGHHGHGATQMMPPIAGHPGPMWGVPSYYG 249
Query: 45 QGPQSE--------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 250 QQPFNQHIAPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 309
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
QF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 310 QFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 344
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 103 GTPVPNSSRVFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEFVLVSLF 154
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
S++ S KI +G GFV+F++ + AL ++ G G +++R+S
Sbjct: 155 QSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESEQQRALVEMQGVYCGNRAMRIS 209
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 84/157 (53%), Gaps = 26/157 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA------------------SNGA 42
+TEM GVYC +RPMRI ATP+ SG + S GA
Sbjct: 200 LTEMQGVYCGNRPMRISTATPKNKSGGAGGPAGMPMQGGGGMGGGQPGGMGAPGMYSMGA 259
Query: 43 PGQ-----GPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P Q PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 260 PPQLGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 319
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
FVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 320 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 356
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALH 109
+IFVG L P V + L F +++ S KI P+ +G GFV+FA+ ++ + AL
Sbjct: 142 SIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDPISGMSRGYGFVRFADEQDQQRALT 201
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
++ G G + +R+S P NK
Sbjct: 202 EMQGVYCGNRPMRISTA-TPKNK 223
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--------SNGAPGQG----PQ 48
+TEM GVYC +RPMRI ATP+ A + G P G PQ
Sbjct: 215 LTEMQGVYCGNRPMRISTATPKNKGPAGGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQ 274
Query: 49 SEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R AE
Sbjct: 275 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAE 334
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A++++ G IG VRLSWGR+ N
Sbjct: 335 MAINQMQGYPIGNSRVRLSWGRSQNN 360
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG + E + +IFVG L P V + L F
Sbjct: 124 GTPMPNTNRPFKLNWATGGGLSDR-------NREDRTPEYSIFVGDLGPEVNEYVLVSLF 176
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 177 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTA-TP 235
Query: 130 ANK 132
NK
Sbjct: 236 KNK 238
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 82/148 (55%), Gaps = 17/148 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA----------SNGAPGQG---- 46
+ EM GVYC +RPMRI ATP+ SG + GAP G
Sbjct: 224 LHEMQGVYCGNRPMRISTATPKNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGA 283
Query: 47 PQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
PQ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R
Sbjct: 284 PQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHA 343
Query: 104 AEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 344 AEMAINQMQGYPIGNSRVRLSWGRSQNN 371
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 10 SSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVT 68
++R +++ G P + ++ ++S GG A +GP+ +IFVG L P V
Sbjct: 125 ATRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVN 177
Query: 69 DEDLRQPFS-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
+ L F +Y S KI P+ +G GFV+FA+ + ++ALH++ G G + +
Sbjct: 178 EYVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPM 237
Query: 122 RLSWGRNPANK 132
R+S P NK
Sbjct: 238 RISTA-TPKNK 247
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 43 PGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------ 94
P QGP ++G TT+++G L+P + + +R + G +VK+ K G
Sbjct: 56 PAQGPPGSAQGGDQKTTLWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYC 115
Query: 95 FVQFANRENAEEALHKLNGTVI--GKQSVRLSW 125
FV F N E+A AL +LNG VI + +L+W
Sbjct: 116 FVDFENPESATRAL-QLNGQVIPNSNRQFKLNW 147
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 82/134 (61%), Gaps = 9/134 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG------GYASNGAPGQGPQSEGDSS 54
+ EM G C RP+R+G ATP+ + + G+ S P PQ D++
Sbjct: 245 LAEMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPV--PQF-ADTA 301
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N+T+FVGGL V++E+L+ F +GEI VKIP GKGCGFVQF NR++AE A+++L G
Sbjct: 302 NSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGY 361
Query: 115 VIGKQSVRLSWGRN 128
+G +RLSWGRN
Sbjct: 362 PLGNSRIRLSWGRN 375
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFAN 100
+S +S +IFVG L PNV + D+ F S+Y S KI V +G GFV+F +
Sbjct: 178 KSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTD 237
Query: 101 RENAEEALHKLNGTVIGKQSVRL 123
+ + AL ++ G + G + +R+
Sbjct: 238 ENDQKSALAEMQGQICGDRPIRV 260
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 89/157 (56%), Gaps = 26/157 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY--------QQQYSSQG-------GYASNGAP-- 43
+TEM GVYC +RPMRI ATP+ +G QQ + G G S GAP
Sbjct: 458 LTEMQGVYCGNRPMRISTATPKNKAGGGGPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPP 517
Query: 44 --------GQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 518 MQYGGGYGQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 577
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
FVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 578 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 614
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 368 GSMIPNTARPFKLNWASGGGLADRRD-DRGPE-------YSIFVGDLGPEVNEYVLVSLF 419
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+++ S KI P+ +G GFV+FA+ + + AL ++ G G + +R+S P
Sbjct: 420 QARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMRISTA-TP 478
Query: 130 ANK 132
NK
Sbjct: 479 KNK 481
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 82/150 (54%), Gaps = 19/150 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------SSGYQQQYSSQGGYASNG- 41
+ EM GVYC +RPMRI ATP+ Q ++ G+A G
Sbjct: 200 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGY 259
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +R
Sbjct: 260 NPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHR 319
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE A++++ G IG VRLSWGR+ N
Sbjct: 320 HAAEMAINQMQGYPIGNSRVRLSWGRSQNN 349
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 110 GNPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 161
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 162 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 216
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 78/147 (53%), Gaps = 17/147 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------------GAPG 44
+TEM GVYC +RPMRI ATP+ GAP
Sbjct: 214 LTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAP- 272
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPAN 131
E A++++ G IG VRLSWGR+ N
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 123 GTPMPNTNRVFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 175
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 176 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTA-TP 234
Query: 130 ANK 132
NK
Sbjct: 235 KNK 237
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 78/147 (53%), Gaps = 17/147 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----------------GAPG 44
+TEM GVYC +RPMRI ATP+ GAP
Sbjct: 214 LTEMQGVYCGNRPMRISTATPKNKGPGVGGNGGAAMGMPGPAGMYPPMGGPPMPFYGAP- 272
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPAN 131
E A++++ G IG VRLSWGR+ N
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ +++ GG A +GP+ +IFVG L P V + L F
Sbjct: 123 GTPMPNTNRVFKLNWATGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 175
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI P+ +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 176 QSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTA-TP 234
Query: 130 ANK 132
NK
Sbjct: 235 KNK 237
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 32/160 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
+ EM GVYC +RPMRI ATP+ + Y +Q G+ A G P GPQ
Sbjct: 203 LVEMQGVYCGNRPMRISTATPKNRN--HGPYGAQQGHQMPPAMHPHQPQAFYGVP-PGPQ 259
Query: 49 -----------------SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 260 FNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 319
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GCGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 320 GCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 84
GY ++ GY N GP + D + TT+++G L+P + + ++ F + GE +
Sbjct: 21 GYGTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVN 80
Query: 85 VKIPVGKGCG-----FVQFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
VK+ K G FV+F + + A +AL LNGT + + +L+W R D
Sbjct: 81 VKVIRDKSSGNAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGINDRRDD 139
Query: 138 YGNQWS 143
G ++S
Sbjct: 140 RGPEFS 145
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E N +S+ + + G P + ++ ++S GG ++ +GP+ +IF
Sbjct: 96 FVEFNSTDAASKALALNGTPVPNSARMFKLNWASGGGI-NDRRDDRGPE-------FSIF 147
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLN 112
VG L P V + L F +++ S KI +G GFV+F + ++ + AL ++
Sbjct: 148 VGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQ 207
Query: 113 GTVIGKQSVRLSWGRNPANKQ---FRADYGNQWSGAYYGGQVYDGYGYAIPP 161
G G + +R+S P N+ + A G+Q A + Q YG +PP
Sbjct: 208 GVYCGNRPMRISTA-TPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYG--VPP 256
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 86/160 (53%), Gaps = 32/160 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY------------ASNGAPGQGPQ 48
+ EM GVYC +RPMRI ATP+ + Y +Q G+ A G P GPQ
Sbjct: 203 LVEMQGVYCGNRPMRISTATPKNRN--HGPYGAQQGHQMPPAMHPHQPQAFYGVP-PGPQ 259
Query: 49 -----------------SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
D +NTT+FVGGL VT+++LR F +GEI VKIP GK
Sbjct: 260 FNQGYGAAPQFQQQQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGK 319
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GCGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 320 GCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 359
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIAS 84
GY ++ GY N GP + D + TT+++G L+P + + ++ F + GE +
Sbjct: 21 GYGTPVAAGMGYPPNANELTGPGNSPDGNKTTLWMGELEPWMDENFIKGVFATATGEQVN 80
Query: 85 VKIPVGKGCG-----FVQFANRENAEEALHKLNGTVI--GKQSVRLSWGRNPANKQFRAD 137
VK+ K G FV+F + + A +AL LNGT + + +L+W R D
Sbjct: 81 VKVIRDKSSGNAGYCFVEFNSTDAASKAL-ALNGTPVPNSARMFKLNWASGGGINDRRDD 139
Query: 138 YGNQWS 143
G ++S
Sbjct: 140 RGPEFS 145
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 22/172 (12%)
Query: 1 MTEMNGVYCSSRPMRI-GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
E N +S+ + + G P + ++ ++S GG ++ +GP+ +IF
Sbjct: 96 FVEFNSTDAASKALALNGTPVPNSARMFKLNWASGGGI-NDRRDDRGPE-------FSIF 147
Query: 60 VGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLN 112
VG L P V + L F +++ S KI +G GFV+F + ++ + AL ++
Sbjct: 148 VGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQ 207
Query: 113 GTVIGKQSVRLSWGRNPANKQ---FRADYGNQWSGAYYGGQVYDGYGYAIPP 161
G G + +R+S P N+ + A G+Q A + Q YG +PP
Sbjct: 208 GVYCGNRPMRISTA-TPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYG--VPP 256
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 21/152 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS------------------GYQQQ--YSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ G QQ + G+
Sbjct: 180 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYG 239
Query: 41 G-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 240 GYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 299
Query: 100 NRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+R AE A++++ G IG VRLSWGR+ N
Sbjct: 300 HRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 331
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 90 GTPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 141
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 142 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 196
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 82/152 (53%), Gaps = 21/152 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS------------------GYQQQ--YSSQGGYASN 40
+ EM GVYC +RPMRI ATP+ G QQ + G+
Sbjct: 180 LVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYG 239
Query: 41 G-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 240 GYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 299
Query: 100 NRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+R AE A++++ G IG VRLSWGR+ N
Sbjct: 300 HRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 331
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 90 GTPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 141
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 142 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 196
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG----------QGPQSE 50
+ EMNG + R +R+ ATP+ + +++ APG Q P +
Sbjct: 185 LVEMNGKWLDGRLIRVALATPKHQNQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAY 244
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D +NTT+FVGGL N+T+ L F YG+I VK+P GKGCGFV+F R +AE A+ +
Sbjct: 245 SDPTNTTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQ 304
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRA 136
L G VI VRLSWGR+ N A
Sbjct: 305 LQGYVIDGSRVRLSWGRSNRNHLLAA 330
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 80/156 (51%), Gaps = 25/156 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS--------------GYQQQYSSQGGY--------- 37
+ EM GVYC +RPMRI ATP+ G QQ GG
Sbjct: 200 LVEMQGVYCGNRPMRISTATPKNRGNHGFAHGHHNAMMGGMPQQQMWAGGMQQGFPYGGG 259
Query: 38 --ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGF 95
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGF
Sbjct: 260 GGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 319
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 320 VQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 355
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 110 GSGVPNSSRHFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 161
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--R 127
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S +
Sbjct: 162 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPK 221
Query: 128 NPANKQFRADYGNQWSGAYYGGQVYDG 154
N N F + N G Q++ G
Sbjct: 222 NRGNHGFAHGHHNAMMGGMPQQQMWAG 248
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 82/155 (52%), Gaps = 24/155 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-----------------------SSGYQQQYSSQGGY 37
+ EM GVYC +RPMRI ATP+ Q ++ G+
Sbjct: 259 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHHGGGGPMMGGGMPQQQQQPMWNGMQGF 318
Query: 38 ASNG-APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
A G P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFV
Sbjct: 319 AYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFV 378
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
QF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 379 QFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 413
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 39 SNGAPGQG------PQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVGK 91
+NG P G P D S TT+++G L+P + + ++ F S GE +VK+ K
Sbjct: 84 ANGTPPSGDMSAPPPTGSSDQSKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDK 143
Query: 92 GCG-----FVQFANRENAEEALHKLNGTVIGKQS--VRLSWGRNPANKQFRADYGNQWS 143
G FV+F N + A +AL LNG + S +L+W R D G ++S
Sbjct: 144 NSGNAGYCFVEFQNADAASKAL-GLNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYS 201
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 169 GNPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 220
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 221 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 275
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 79/157 (50%), Gaps = 27/157 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
+TEM GVYC +RPMRI ATP+ SG
Sbjct: 27 LTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGP 86
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 87 PMAGYYGTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 145
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
FVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 146 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 182
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 87/179 (48%), Gaps = 45/179 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---KSSGYQQQYSSQGG------YASNGAPGQ------ 45
+ EMNG + RP+R+ ATPR K G+Q Y GG Y GAPG
Sbjct: 229 LVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGSPDYGNM 288
Query: 46 -----------------------------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
Q D +NTT+FVGGL +V ++ L F
Sbjct: 289 GGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLF 348
Query: 77 SQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA-NKQF 134
Q+G I +KIP GK CGFV++ NRE+AEEA+ + G +IG VRLSWGR A NK+F
Sbjct: 349 KQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWGRVSASNKKF 407
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 87/179 (48%), Gaps = 45/179 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---KSSGYQQQYSSQGG------YASNGAPG------- 44
+ EMNG + RP+R+ ATPR K G+Q Y GG Y GAPG
Sbjct: 229 LVEMNGAWFGGRPLRVALATPRSSGKRFGFQNMYPFWGGGAPYYPYGYAGAPGLPDYGNM 288
Query: 45 ----------------------------QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
Q D +NTT+FVGGL +V ++ L F
Sbjct: 289 GGLNEEDDYGGAPPPPPPPPPPGQIPYPPPVQQYTDPNNTTVFVGGLSSDVNEQTLFTLF 348
Query: 77 SQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA-NKQF 134
Q+G I +KIP GK CGFV++ NRE+AEEA+ + G +IG VRLSWGR A NK+F
Sbjct: 349 KQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGFIIGGNRVRLSWGRVLASNKKF 407
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 79/157 (50%), Gaps = 27/157 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG--------------------------YQQQYSSQ 34
+TEM GVYC +RPMRI ATP+ SG
Sbjct: 223 LTEMQGVYCGNRPMRISTATPKNKSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGP 282
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G P Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCG
Sbjct: 283 PMAGYYGTP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCG 341
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
FVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 342 FVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 378
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 133 GSMIPNTTRPFKLNWASGGGLADR-RDDRGPE-------FSIFVGDLGPEVNEYVLVSLF 184
Query: 77 -SQYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+++ S KI P+ +G GFV+FA + + AL ++ G G + +R+S P
Sbjct: 185 QARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTA-TP 243
Query: 130 ANK 132
NK
Sbjct: 244 KNK 246
>gi|303290118|ref|XP_003064346.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453944|gb|EEH51251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 420
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK--SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
+ EMNG+ C SR MRI A PRK + GYQ G G G G + N T+
Sbjct: 172 LVEMNGLACGSRNMRISLAIPRKNMTVGYQGGGGGGGDGGGGGGGGGGGARDDGDDNCTV 231
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
FVGGL +++D +LR F YGE+ +KIP GKGCGFVQFA R AE A+ LN +IG
Sbjct: 232 FVGGLG-SISDAELRIHFEPYGELVYIKIPHGKGCGFVQFAQRSCAEAAIAGLNNALIGT 290
Query: 119 QSVRLSWGR-NP 129
VRLSW R NP
Sbjct: 291 SRVRLSWVRSNP 302
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P Y+ ++S G A G G + +S++ +IFVG L P V D L++ F
Sbjct: 76 GTQMPNAQQNYRLNWASFGVGARFAGGGDGGAT--NSNDHSIFVGDLPPEVNDFMLQEVF 133
Query: 77 S-QYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
S +Y + + ++ KG GFV+FA+ + AL ++NG G +++R+S
Sbjct: 134 SSRYASVRNARVVTDPATGRSKGFGFVRFADESQRDRALVEMNGLACGSRNMRIS 188
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAE 105
++ +T+++G L + + L Q F+ G +ASVKI K G GFV+ +R AE
Sbjct: 9 EAGGSTLWIGDLGYWMDEAYLHQCFASVGGVASVKIIRNKQTGYSEGYGFVEMCDRATAE 68
Query: 106 EALHKLNGTVI--GKQSVRLSW 125
AL LNGT + +Q+ RL+W
Sbjct: 69 HALRALNGTQMPNAQQNYRLNW 90
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 79/162 (48%), Gaps = 31/162 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG-------------------------------YQQ 29
+ EM GVYC +RPMRI ATP+ Y
Sbjct: 181 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQQMWGGVQNFPYGG 240
Query: 30 QYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
GG N P D +NTT+FVGGL VT+++LR F +GEI VKIP
Sbjct: 241 GGGGGGGGGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPP 300
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GKGCGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 301 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 342
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G A P ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 91 GQAVPNSQRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 142
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 143 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 197
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 83/162 (51%), Gaps = 34/162 (20%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---------------------------KSSGYQQQYSS 33
+ EM+G+YC SRPMRI AT + ++ GY S
Sbjct: 171 LIEMHGLYCLSRPMRISPATAKFKPASGVGNGLGVSGLLSEAQLRQVFGQTDGYLMTEES 230
Query: 34 QGGYASNGAPG---QGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+A A GP E D NTT+FVGGL P +++E LR F+ +G+I VK
Sbjct: 231 LKHHAHARAILGNLMGPNGEQLTSNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVK 290
Query: 87 IPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
+PVGK CGFVQF + +AE A+ K+ G IG +RLSWGR+
Sbjct: 291 VPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 332
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 26/204 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ-------QQYSSQGG----YASNGAPGQGPQS 49
+ EM+G++ RP+R+ ATPR +G+Q QY+ +ASN + +
Sbjct: 215 LHEMSGIWLGGRPIRVALATPR-GAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSR--NI 271
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D +N+T+FVGGL V++E L F +G I+S+KIP GKGCGFV+F+ RE AE A+
Sbjct: 272 YNDPTNSTVFVGGLAAGVSEETLFTLFEPFGSISSIKIPRGKGCGFVKFSTREEAENAIS 331
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYG-----YAIPPPND 164
++G +IG VRLSWGR+ Q + + G V+D G Y IPP
Sbjct: 332 GMHGFLIGGSRVRLSWGRSSLPNQHTHSHPHPQHLMMSPG-VFDPMGRNGGMYGIPPGVA 390
Query: 165 PSMYAAAAAAYGAYPVYGSHQQQV 188
P + G P+Y QV
Sbjct: 391 PGVLP------GMTPIYYPTDSQV 408
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
++FVG L P+ T+ L F Y I SV++ + GFV+F E+ + ALH
Sbjct: 157 SLFVGDLSPSTTEAHLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALH 216
Query: 110 KLNGTVIGKQSVRLS 124
+++G +G + +R++
Sbjct: 217 EMSGIWLGGRPIRVA 231
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----------------GCGFVQFA 99
T+++G L+P +E++ Q + Q G+ VK+ + G FV+F
Sbjct: 53 TLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVEFE 112
Query: 100 NRENAEEALHKLNGTVIGKQS---VRLSWGRNPA 130
E+A +AL LNG+++ + S RL+W P
Sbjct: 113 RHEDALQAL-ALNGSIVPRSSGRLFRLNWASGPT 145
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTTIF+G LD NVT+E LR F ++GEIA K KGCGFV F +R++A EA+ L
Sbjct: 296 DPQNTTIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENL 355
Query: 112 NGTVIGKQSVRLSWGRNPANK-----QFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPS 166
+G++IG + VRLSWGR+ A K ++ Y SG Y GG + PP P
Sbjct: 356 HGSMIGSKRVRLSWGRHNATKCAIASMYQQQYPPVQSGMYMGG---------VMPPMVPG 406
Query: 167 MYAAAAAAYGAYPVYG 182
M +A + +YG
Sbjct: 407 MVMPMTSAASVWSMYG 422
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 30/157 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ----------------QQYSSQGGYAS--NGA 42
+ EM G SRP+R+ ATP+ +Q QQ SQ + NGA
Sbjct: 149 LQEMQGYMLGSRPLRVSTATPKNRHHHQPYMQFQPQQFQPPAHYQQLHSQHPFPHHPNGA 208
Query: 43 PGQ--------GPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
P GP D++NTT+FVGGL +V++++LRQ F +G+I VKIP G
Sbjct: 209 PSHQVHQPFYGGPAHPLNQFTDANNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPG 268
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
KGCGFVQ+ R++AE A+ ++ G IG VRLSWGR
Sbjct: 269 KGCGFVQYVQRQSAEMAITQMQGYPIGNGRVRLSWGR 305
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 77/159 (48%), Gaps = 28/159 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS----------------------------GYQQQYS 32
+ EM GVYC +RPMRI ATP+ +
Sbjct: 220 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQAFPYGGG 279
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N P D +NTT+FVGGL VT+++LR F +GEI VKIP GKG
Sbjct: 280 GAAAAGGNFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 339
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
CGFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 340 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 378
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 130 GTPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 181
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 182 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 236
>gi|30682335|ref|NP_849641.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332190644|gb|AEE28765.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 306
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 10/102 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK-SSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
MTEMNGV CS+RPMRIG A +K +G + Y S G ++ D +NTT+F
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAA---------GVTTDNDPNNTTVF 264
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
VGGLD +VTD+ L+ FSQYGEI VKIP GK CGFVQF+ +
Sbjct: 265 VGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK 306
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------KGCGFVQFANRENA 104
DS + TIFVG L +VTD L + F + Y + K+ + KG GFV+F++
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 105 EEALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 211 IRAMTEMNGVPCSTRPMRI 229
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 85/151 (56%), Gaps = 20/151 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS-------------------GYQQQYSSQGGYASNG 41
+ EM GVYC +RPMRI ATP+ S G Q S GG
Sbjct: 234 LHEMQGVYCGNRPMRISTATPKNKSGGGGPGMGGMPGGMQPGMYGMGQPPMSGGGGGGGY 293
Query: 42 APGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
P Q P ++ D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF +
Sbjct: 294 YPQQQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVH 353
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
R AE A++++ G IG VRLSWGR+ N
Sbjct: 354 RHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 384
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P + ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GQMIPNSNRQFKLNWASGGGLADRSRDDRGPE-------YSIFVGDLGPEVNEYVLMSLF 195
Query: 77 S-QYGEIASVKI---PVG---KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+Y S KI P+ +G GFV+F++ ++ ++ALH++ G G + +R+S P
Sbjct: 196 QGKYNSCKSAKIMSDPISGMSRGYGFVRFSDEQDQQKALHEMQGVYCGNRPMRISTA-TP 254
Query: 130 ANK 132
NK
Sbjct: 255 KNK 257
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 15/116 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNGVYCSSRPMR+ AT R S Q ++ E + +NTT+FV
Sbjct: 155 LQTMNGVYCSSRPMRVSVATERNKSRQQVGFT---------------MGEEEGTNTTVFV 199
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
GGLDP T+++LR F G I SVK+P G+GCGFVQ++++E AE A+ ++NG +
Sbjct: 200 GGLDPATTEDELRARFGALGAIVSVKVPPGRGCGFVQYSSKEAAEVAISQMNGQAV 255
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAE 105
S + +IFVG L P+VTDE L F +++ + K+ PV KG GFV+F ++E A+
Sbjct: 93 SDDHSIFVGDLAPDVTDELLLATFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEAD 152
Query: 106 EALHKLNGTVIGKQSVRLSWG--RNPANKQ 133
+AL +NG + +R+S RN + +Q
Sbjct: 153 QALQTMNGVYCSSRPMRVSVATERNKSRQQ 182
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 22/157 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSG----YQQQYSSQGGYASNGAPGQGPQSE------ 50
+ EM GV+ + R +++G ++ + +SG Q + GG G P S
Sbjct: 217 LAEMQGVFLNGRALKVGMSSGQSNSGAGGSRQVGHDRYGGSKPAGGKSNTPNSALFSQFM 276
Query: 51 ------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
D +NTT+F+GGL P V +E+LRQ F +GEI VKIPVGKGCGFVQ+
Sbjct: 277 YPIQQQPALNHFTDPNNTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQY 336
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFR 135
+R +AE A+ ++ G I VRLSWGR+ +Q +
Sbjct: 337 IDRISAETAISQMQGFPISNSRVRLSWGRSAKQQQLQ 373
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 37 YASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIA-SVKIPV 89
+AS+ AP S +N +IFVG L PNVT+ L R P +++ ++ + V
Sbjct: 139 WASSSAPSTAGVSTTGGNNFSIFVGDLAPNVTEAQLFDLFISRYPSTEHAKVVIDLSTGV 198
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
KG GF++F + + + AL ++ G + +++++
Sbjct: 199 SKGYGFIRFRDPADQQTALAEMQGVFLNGRALKV 232
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 21/139 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEG--------- 51
+ M G C RP+RI A+P+ S+ A++ A G P S
Sbjct: 241 LMHMQGYLCQGRPLRISVASPK----------SRASIAADSALGIVPTSTSNRQPNQDLC 290
Query: 52 --DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ++ + AE+A++
Sbjct: 291 SMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAIN 350
Query: 110 KLNGTVIGKQSVRLSWGRN 128
+ G ++G +RL+WG N
Sbjct: 351 TMQGALVGTSHIRLAWGHN 369
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASV 85
++ +++ GG N + P+ +IFVG L P D DL F S Y S
Sbjct: 160 FKLNWATGGGIQHNNFVSRDPE-------FSIFVGDLLPTTEDSDLFMTFRSIYPSCTSA 212
Query: 86 KIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRAD 137
KI V + GFV+F++ + + AL + G + + +R+S + AD
Sbjct: 213 KIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSRASIAAD 270
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 40 NGAPGQGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG- 94
N +P P + G + T+++G L+P + ++Q ++ E +VK+ K
Sbjct: 65 NCSPSSTPLQDVAGVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSS 124
Query: 95 -------FVQFANRENAEEALHKLNGTVI--GKQSVRLSWG 126
FVQF++ AE AL K N T+I + +L+W
Sbjct: 125 ETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWA 165
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 77/158 (48%), Gaps = 27/158 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS---------------------------SGYQQQYSS 33
++EM GVYC +RPMRI ATP+
Sbjct: 87 LSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPG 146
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
GA Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGC
Sbjct: 147 GPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 206
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 207 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 244
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L P V + L F S++ S KI + +G GFV+F++ + + AL
Sbjct: 29 SIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALS 88
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
++ G G + +R+S P NK
Sbjct: 89 EMQGVYCGNRPMRISTA-TPKNK 110
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 81/169 (47%), Gaps = 49/169 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 27 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 75
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 76 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 135
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VKIP GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 136 TYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 184
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 81/158 (51%), Gaps = 27/158 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA------------------ 42
+ EM GVYC +RPMRI ATP+ + + QGG G
Sbjct: 201 LVEMQGVYCGNRPMRISTATPKNRGNHGFGHGHQGGPMMGGGMPQQQMWGGVQGFPYGGG 260
Query: 43 ---------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
P D +NTT+FVGGL VT+++LR F +GEI VKIP GKGC
Sbjct: 261 AGAGGGGFNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 320
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GFVQF +R AE A++++ G IG VRLSWGR+ N
Sbjct: 321 GFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 358
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P S ++ ++S GG +GP+ +IFVG L P V + L F
Sbjct: 111 GTPVPNSSRQFKLNWASGGGLVDR-RDDRGPE-------YSIFVGDLGPEVNEYVLVSLF 162
Query: 77 -SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+++ S KI +G GFV+F++ + + AL ++ G G + +R+S
Sbjct: 163 QARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRIS 217
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 81/169 (47%), Gaps = 49/169 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAP----------------- 43
++EM GVYC +RPMRI ATP+ G A G P
Sbjct: 234 LSEMQGVYCGNRPMRISTATPKNK-----------GPAGPGGPAHMGVPGGPPGGMYPPS 282
Query: 44 ------------------GQGPQSEG---DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
G PQ D +NTT+FVGGL VT+++LR F +GEI
Sbjct: 283 MGGAGGPPGPGGPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEI 342
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
VKIP GKGCGFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 343 TYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 391
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 143 GTPMPNTQRPFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 195
Query: 77 -SQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI + +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 196 QSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTA-TP 254
Query: 130 ANK 132
NK
Sbjct: 255 KNK 257
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 77/158 (48%), Gaps = 27/158 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS---------------------------SGYQQQYSS 33
++EM GVYC +RPMRI ATP+
Sbjct: 215 LSEMQGVYCGNRPMRISTATPKNKGPAGPGGPAHMGVPGGPPGGMYPPSMGGAGGPPGPG 274
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
GA Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGC
Sbjct: 275 GPQMGYYGAAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGC 334
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
GFVQF R AE A++++ G IG VRLSWGR+ N
Sbjct: 335 GFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 372
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G P ++ ++S GG A +GP+ +IFVG L P V + L F
Sbjct: 124 GTPMPNTQRPFKLNWASGGGLADRSREERGPE-------FSIFVGDLGPEVNEYVLVSLF 176
Query: 77 -SQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
S++ S KI + +G GFV+F++ + + AL ++ G G + +R+S P
Sbjct: 177 QSRFPSCKSAKIMTDPITGLSRGYGFVRFSDETDQQRALSEMQGVYCGNRPMRISTA-TP 235
Query: 130 ANK 132
NK
Sbjct: 236 KNK 238
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEM GVY SSRP++I AT + SQG + NTT++V
Sbjct: 168 MTEMQGVYISSRPVKISHAT--------NNFKSQGALEDLMPTTIITTDPLEQENTTVYV 219
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G L PN ++ LR+ F YG I SVKIP CGF+ F E+AE A+ ++NG I
Sbjct: 220 GNLSPNTDEKILREFFQGYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGIEIQGNR 279
Query: 121 VRLSWGRNPANKQ 133
VR+SWGR NK+
Sbjct: 280 VRVSWGRVQHNKK 292
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGF 95
PG P S G + +IFVG L P+V D L Q F ++Y + K+ + KG GF
Sbjct: 96 PGGKPSSGGKENIVSIFVGDLAPDVNDYMLEQTFRNRYPSVRGAKVVMDPKSGISKGYGF 155
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
V+FA+ ++ ++ ++ G I + V++S N
Sbjct: 156 VKFADEDDMMRSMTEMQGVYISSRPVKISHATN 188
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 42/167 (25%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR------------------------------------KS 24
++EMNGV+C RP+R+ ATPR K+
Sbjct: 287 LSEMNGVWCQGRPLRVAYATPRNNNNIISNQQNTATQLSHHGNSYHNNSHNNGNNRSRKN 346
Query: 25 SGYQQQYSSQGGYASNGAPGQGPQ-SEGDSSN---TTIFVGGLDPNVTDEDLRQPFSQYG 80
S Y Q Y +N GQ PQ S+ +S N +T+F+GGL P + + +R F +G
Sbjct: 347 SSSILNY--QNNYTANTNHGQPPQLSKSNSQNELVSTVFIGGLSPKINESQVRSLFKPFG 404
Query: 81 EIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
I +VK+P GK CGFV+F NR +AE A+ L G ++ +RLSWG+
Sbjct: 405 NIVNVKLPPGKNCGFVKFENRIDAEAAIQGLQGFIVAGNPIRLSWGK 451
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++FVG L P T+ DL F Q Y + +V++ P+ + GF++F +++ + AL
Sbjct: 229 SLFVGDLSPTATEADLLSLFQQQYRSVKTVRVMTDPITGASRCFGFIRFGDQDERKRALS 288
Query: 110 KLNGTVIGKQSVRLSWG 126
++NG + +R+++
Sbjct: 289 EMNGVWCQGRPLRVAYA 305
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 17/128 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MNG C RP+R+ AT R S GQ D SNTT+FV
Sbjct: 166 LTAMNGAECCGRPIRVAPATKRTS-----------------VQGQTGAHATDPSNTTVFV 208
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG++ +VT++ LR F+ GEI +V P G+GC FV FA+R +AE ++ + GT +
Sbjct: 209 GGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSC 268
Query: 121 VRLSWGRN 128
VRLSWG++
Sbjct: 269 VRLSWGKS 276
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALH 109
++FVG L P VTD +L+ F +Y + K+ K GF++F + + +EAL
Sbjct: 108 SVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALT 167
Query: 110 KLNGTVIGKQSVRLSWGRNPANKQ 133
+NG + +R++ PA K+
Sbjct: 168 AMNGAECCGRPIRVA----PATKR 187
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKIP------VGKGCGFVQFAN 100
Q E S+ T+++G + P+ T+E + FS G+ VK+ + G GF+ F N
Sbjct: 8 QDENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRN 67
Query: 101 RENAEEALHKLNGTVIGKQSV--RLSWG 126
E A+ L LNG I S+ RL+WG
Sbjct: 68 HETAQLVLDSLNGKPIEGTSLRYRLNWG 95
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 27/154 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA------------------ 42
++EM G C RP+RI A+PR + ++ G AS
Sbjct: 243 LSEMQGYLCHGRPLRISVASPRSRTSISADSTTPTGAASTANGGAAASSSAVATGVTGVP 302
Query: 43 --------PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
P QG S D NTT+FVGGL T++DL FS +G I ++KIP GKGCG
Sbjct: 303 SSSSSTRQPDQGLCSI-DPFNTTVFVGGLFSGATEKDLFYHFSPFGNILNIKIPPGKGCG 361
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
FVQ+ + AE+A+ + G ++G +RL+WG N
Sbjct: 362 FVQYTEKAAAEKAITMMQGALVGPSHIRLAWGHN 395
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 21 PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQY 79
PR S ++ +++ GG + + P+ ++FVG LDP + +L F S Y
Sbjct: 156 PRTHSVFKLNWATGGGIQHSAKTRREPE-------YSVFVGDLDPETHEAELYHTFHSVY 208
Query: 80 GEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
S KI + + GFV+F++ + AL ++ G + + +R+S +
Sbjct: 209 PSCTSAKIIIDPVTGMSRKYGFVRFSDEREQQRALSEMQGYLCHGRPLRISVASPRSRTS 268
Query: 134 FRAD 137
AD
Sbjct: 269 ISAD 272
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI-----PVGKGC---GFVQFANRENAEE 106
N T+++G L+ + ++Q ++ GE VK+ V +GC FVQF++ + AE
Sbjct: 86 NDTLWMGDLESWMDAAFIQQLWASLGETVHVKLMRTKSSVSEGCVSYCFVQFSSPQAAEY 145
Query: 107 ALHKLNGTVIGK-QSV-RLSWG 126
AL + N T+I + SV +L+W
Sbjct: 146 ALLRYNNTIIPRTHSVFKLNWA 167
>gi|328769877|gb|EGF79920.1| hypothetical protein BATDEDRAFT_19794 [Batrachochytrium
dendrobatidis JAM81]
Length = 470
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 21/149 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSS---------GY----QQQYSSQGGYASNGA----- 42
+ ++ G SRP+R+ ATP+ + GY + G N A
Sbjct: 163 LVDLQGQMIGSRPVRVSIATPKHKALGSNGHGMPGYYPIPPSYMDASGAMIPNSAHMIYR 222
Query: 43 -PGQGPQSEG--DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
P Q G D +N+TIF+G L +T++DLR+ F +GEI KIP GK CGFVQF
Sbjct: 223 QPVYMHQHLGGNDPTNSTIFIGALPATMTNDDLRKHFLPFGEIVYTKIPFGKRCGFVQFI 282
Query: 100 NRENAEEALHKLNGTVIGKQSVRLSWGRN 128
+R++AE A+ +++G VIG ++RLSWGR+
Sbjct: 283 HRQSAEMAIQEMDGKVIGGSALRLSWGRS 311
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPVG------KGCGFVQFANRENAEEALH 109
+IFVG L + D L Q F + Y + S ++ + KG GFV+F + + +++L
Sbjct: 105 SIFVGDLAHEINDILLMQVFHERYPSVKSARVVIDPTTGSPKGYGFVRFGSEADQQQSLV 164
Query: 110 KLNGTVIGKQSVRLS 124
L G +IG + VR+S
Sbjct: 165 DLQGQMIGSRPVRVS 179
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFAN 100
P+S G S T+++G L P + + +RQ + GE +VK+ K G FV+F++
Sbjct: 6 PESSGGS---TLWMGDLLPWMDEHFIRQTWRLLGESVTVKMIKDKSTGSLAGYCFVEFSS 62
Query: 101 RENAEEALHKLNGTVI 116
+ A + L +NGT+I
Sbjct: 63 SDVAAKLLELVNGTLI 78
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 19/151 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQ------QQYSSQG-GYASNGAPG----QGPQS 49
+TEM+G +SRP+R+ AT +KS Q + + GAP Q S
Sbjct: 161 LTEMSGHVINSRPIRVSIATAKKSQTATMLPKQCQNFDFENFRLRVQGAPAPVASQPHPS 220
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ D +NTT+F+GGL V+++DLR F ++G+I KIP GKGCGFVQF R AE A+
Sbjct: 221 DYDPNNTTLFIGGLSSGVSEDDLRVLFGRFGDIVYTKIPPGKGCGFVQFVQRPAAESAMA 280
Query: 110 K--------LNGTVIGKQSVRLSWGRNPANK 132
+ L G ++G ++R+SWGR+ ++
Sbjct: 281 QMQARCSPSLFGQILGGSTIRISWGRSSTSR 311
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKI---PV---GKGCGFVQFANRENAEE 106
S+ ++FVG L P+VTD L++ F Q+ + S K+ P+ KG GFV+F N +
Sbjct: 100 SDYSVFVGDLAPDVTDYALQEHFRQFFASVRSAKVITDPLTGRSKGYGFVRFGNEAERDR 159
Query: 107 ALHKLNGTVIGKQSVRLS 124
+L +++G VI + +R+S
Sbjct: 160 SLTEMSGHVINSRPIRVS 177
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHK 110
T+++G L + + + F G + SVKI V +G GFV+FA E AE+ L
Sbjct: 12 TLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLRT 71
Query: 111 LNGTVI--GKQSVRLSWG 126
NG I Q RL+W
Sbjct: 72 FNGCPIPNTDQIFRLNWA 89
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 57/77 (74%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
DS NTT++VGGL P+V+ E+L+ FS +G+I V+IP GK CGFVQFA NAE+A+ L
Sbjct: 580 DSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIAHL 639
Query: 112 NGTVIGKQSVRLSWGRN 128
NG IG Q +RLSWG +
Sbjct: 640 NGQYIGGQPIRLSWGHH 656
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPVG-----KGCGFVQFANRENAEEALHK 110
++FVG L +VTD L F Q Y + K+ V KG GFV+F + + AL +
Sbjct: 97 SLFVGDLTADVTDFQLHSFFKQLYASCKTAKVVVDQAGTPKGFGFVRFTDSNDCLRALLE 156
Query: 111 LNGTV-IGKQSVRLSWGRNPANKQFRADYGNQWSG 144
+NG V G + +R+S A R D ++ SG
Sbjct: 157 MNGAVGCGGKPMRVS-----AATPKRPDLVSELSG 186
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 30/158 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKS------SGYQQQYSSQ---------GGYASNGAPGQ 45
+ EM GV+ + R +R+ + KS SG ++ G +P
Sbjct: 201 LVEMQGVFLNGRAIRVSTTSKNKSRFRGGLSGTVTSAAAATAGPPVGNLSGVIQTSSPQT 260
Query: 46 GPQSE---------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG 90
PQ D +NTT+F+GGL VT+E+LR F +G+I VKIPVG
Sbjct: 261 LPQQSQFIYPVQQQPVLSQFTDPNNTTVFIGGLSSLVTEEELRAYFQPFGQIVYVKIPVG 320
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
KGCGFVQ+ +R +AE A+ K+ G IG +RLSWGR+
Sbjct: 321 KGCGFVQYVDRSSAENAIAKMQGFPIGNSRIRLSWGRS 358
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L PNV++ L + F S+Y + KI V KG GFV+F N + +L
Sbjct: 143 SIFVGDLAPNVSESQLFELFISRYSSTLNAKIVFDQVTGVSKGYGFVKFGNEAEQQRSLV 202
Query: 110 KLNGTVIGKQSVRLS 124
++ G + +++R+S
Sbjct: 203 EMQGVFLNGRAIRVS 217
>gi|384487643|gb|EIE79823.1| hypothetical protein RO3G_04528 [Rhizopus delemar RA 99-880]
Length = 162
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 19/125 (15%)
Query: 4 MNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGG 62
M G SRP+R+ ATP+ ++S +Q ++S ++TT+F+GG
Sbjct: 1 MQGYVIGSRPIRVSTATPKQRTSSNKQSFTS------------------SINSTTVFIGG 42
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
L + +++LR F+ +G+I VKIP GKGCGFVQ+ R +AE A+ ++NG IG +R
Sbjct: 43 LSTPIKEDELRHYFAPFGDIIYVKIPQGKGCGFVQYTTRSSAELAIQQMNGYQIGTSRIR 102
Query: 123 LSWGR 127
LSWGR
Sbjct: 103 LSWGR 107
>gi|388851881|emb|CCF54475.1| related to NAM8-meiotic recombination protein [Ustilago hordei]
Length = 926
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVGGL ++++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 588 SAADPNNTTVFVGGLSSLISEQTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 647
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
H++NG I +RLSWGR+ +K
Sbjct: 648 HRMNGFPILNSKIRLSWGRSQGDK 671
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 76/150 (50%), Gaps = 23/150 (15%)
Query: 1 MTEMNGVYCSSRPMRIG------------------AATPRKSSGYQQQYSSQGGYA---- 38
+ EM G + + R ++IG A S+G QQ S G
Sbjct: 249 LVEMQGCFLNGRAIKIGIAGGNNNNNSNSNYNNQRMANDNISNGLGQQSRSLNGQLPQQF 308
Query: 39 SNGAPGQGPQSE-GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
N P Q + D +NTT+FVGGL P VT+++LR F +G I VKIP GKGCGFVQ
Sbjct: 309 VNATPQQPVLNHFTDPNNTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQ 368
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ R +AE A+ K+ G I VRLSWGR
Sbjct: 369 YVERSSAETAITKMQGFPIANSRVRLSWGR 398
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L P+VT+ L F ++Y K+ + KG GFV+F + + +
Sbjct: 188 TNNSIFVGDLAPSVTEAQLFDLFINKYPSTVHAKVMYDQLTGISKGYGFVKFKSSMDQQR 247
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 248 ALVEMQGCFLNGRAIKI 264
>gi|444313983|ref|XP_004177649.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
gi|387510688|emb|CCH58130.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN--------GAPGQGPQSEGD 52
+ E+ G++ S +A P + +QY+ Y+++ + S D
Sbjct: 198 LVELQGIHLSQ------SALPLTILQFTKQYTLSHSYSNSPSPLLFSSHSLSSSSSSLED 251
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT+F+GGL VT+ +LR F +GEI VKIP GKGCGFVQ+ R+ AE A+HK+
Sbjct: 252 PTNTTVFIGGLSSLVTENELRSLFQPFGEIVYVKIPFGKGCGFVQYETRKAAELAIHKMK 311
Query: 113 GTVIGKQSVRLSWGR 127
G I +RLSWG+
Sbjct: 312 GVSIKNSKIRLSWGK 326
>gi|393229322|gb|EJD36947.1| hypothetical protein AURDEDRAFT_188233 [Auricularia delicata
TFB-10046 SS5]
Length = 893
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P V +E LR F+ +GEI VK+PVGK CGFVQF ++ +AE A+
Sbjct: 401 TSADPYNTTVFVGGLSPLVPEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVHKADAERAI 460
Query: 109 HKLNGTVIGKQSVRLSWGRN 128
K+ G IG +RLSWGR+
Sbjct: 461 EKMQGFPIGGSKIRLSWGRS 480
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 278 DPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 337
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG VRLSWGR+
Sbjct: 338 QGFPIGNSRVRLSWGRS 354
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S +IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N +
Sbjct: 139 SEFSIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQR 198
Query: 107 ALHKLNGTVIGKQSVRLS 124
+L ++ G + +++R+S
Sbjct: 199 SLLEMQGVFLNGRAIRVS 216
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANREN 103
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F +
Sbjct: 48 DTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNLA 106
Query: 104 AEEALHK--LNGTVIGKQSVRLSW 125
A AL K L V ++++L+W
Sbjct: 107 ATNALLKTGLPIPVDASRTLKLNW 130
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 278 DPNNTTVFIGGLSSLVTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKM 337
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG VRLSWGR+
Sbjct: 338 QGFPIGNSRVRLSWGRS 354
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S +IFVG L PNVT+ L + F S+Y + KI V KG GFV+F N +
Sbjct: 139 SEFSIFVGDLAPNVTESQLFELFISRYSSTLNAKIVFDQGTGVSKGYGFVKFGNEAEQQR 198
Query: 107 ALHKLNGTVIGKQSVRLS 124
+L ++ G + +++R+S
Sbjct: 199 SLLEMQGVFLNGRAIRVS 216
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 11/84 (13%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFANREN 103
D+S+T +++G LDP+ T+ D++Q ++ GE A+V++ + K G FV+F +
Sbjct: 48 DTSSTQLYMGDLDPSWTEGDIKQIWATLGE-ANVQVKLIKNSSGGGNSGYCFVEFPSNLA 106
Query: 104 AEEALHK--LNGTVIGKQSVRLSW 125
A AL K L V ++++L+W
Sbjct: 107 ATNALLKTGLPIPVDASRTLKLNW 130
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASN----GAPGQGPQSEGDSSNT 56
+ EMNGV+ SSR + A+ S+ ASN P Q P E D NT
Sbjct: 71 LNEMNGVFISSRQHTLSASA----------VSALAPCASNTHCRNTPTQLP-GELDPQNT 119
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T+FVGGL +V+++ LR F +YGEI+ VKIP GKGCGFV FA+R+ AE A+ ++NGT+I
Sbjct: 120 TLFVGGLSAHVSEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGTII 179
Query: 117 G 117
G
Sbjct: 180 G 180
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQY-GEIASVKIPV------GKGCGFVQFANREN 103
GD + ++FVG L P V D L F QY + S K+ + KG GFV+FA
Sbjct: 7 GDPNCFSLFVGDLPPEVHDHFLESFFRQYFPSVRSAKVMMDNITGRSKGFGFVRFAVEGE 66
Query: 104 AEEALHKLNGTVIGKQSVRLS 124
+ AL+++NG I + LS
Sbjct: 67 RDRALNEMNGVFISSRQHTLS 87
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 80/178 (44%), Gaps = 50/178 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------------------------- 23
+ EMNGV+C R +R+ ATPR
Sbjct: 221 LAEMNGVWCQGRQLRVAYATPRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVP 280
Query: 24 --------SSGYQQQYSSQGG----YASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDE 70
S G QQ G SN P P Q D++NTT+F+GGL +++
Sbjct: 281 SLAQLDAASLGRAQQPLLLGAAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEG 340
Query: 71 DLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
L F +G I SVK+P G+GCGFV+F NR +AE A+ + G ++G ++RLSWGR
Sbjct: 341 QLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGMQGFIVGGNAIRLSWGRT 398
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 80/178 (44%), Gaps = 50/178 (28%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK------------------------------------- 23
+ EMNGV+C R +R+ ATPR
Sbjct: 221 LAEMNGVWCQGRQLRVAYATPRNNLLQQQQAHPAPPAPPSPPAPPAQTLPDSLGLLVGVP 280
Query: 24 --------SSGYQQQYSSQGG----YASNGAPGQGP-QSEGDSSNTTIFVGGLDPNVTDE 70
S G QQ G SN P P Q D++NTT+F+GGL +++
Sbjct: 281 SLAQLDAASLGRAQQPLLLGAAGSLVGSNSLPLAAPRQLPADTANTTVFIGGLSNMISEG 340
Query: 71 DLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
L F +G I SVK+P G+GCGFV+F NR +AE A+ + G ++G ++RLSWGR
Sbjct: 341 QLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGMQGFIVGGNAIRLSWGRT 398
>gi|409050510|gb|EKM59987.1| hypothetical protein PHACADRAFT_250820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 643
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 302 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 361
Query: 109 HKLNGTVIGKQSVRLSWGRN 128
K+ G IG +RLSWGR+
Sbjct: 362 EKMQGFPIGGSRIRLSWGRS 381
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 40/164 (24%)
Query: 1 MTEMNGVYCSSRP-----------MRIGAATPRKSSGYQQQYSSQGGYASNGAPG----- 44
+ EM+G+YC SRP +++G T + + G NGAP
Sbjct: 172 LIEMHGLYCLSRPTAQQYSSTNAAIKVGGVTTNPAGAT----FAPDGQDQNGAPRYMISE 227
Query: 45 ----------------QGPQSE----GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
GP E D NTT+FVGGL P +++E LR F+ +G+I
Sbjct: 228 ESWKHHAQARAILGNLIGPNGEQLTSTDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHY 287
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
VK+PVGK CGFVQF + +AE A+ K+ G IG +RLSWGR+
Sbjct: 288 VKVPVGKHCGFVQFVRKADAERAIEKMQGFPIGGSRIRLSWGRS 331
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL +T+++LR F +G+I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 312 DPNNTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKM 371
Query: 112 NGTVIGKQSVRLSWGR 127
G IG +RLSWGR
Sbjct: 372 QGFPIGNSRIRLSWGR 387
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S T+FVG L PNVT+ L + F S+Y + KI V KG GFV+F N +
Sbjct: 148 SEFTLFVGDLAPNVTEAQLFELFISRYSSTLNAKIVFDQFTGVSKGYGFVKFVNEMEQQR 207
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ GT + +++R+
Sbjct: 208 ALVEMQGTFLNGRAIRV 224
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +GEI VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 561 DPYNTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAIEKM 620
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 621 QGFPIGGSRIRLSWGRS 637
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 1/126 (0%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M EM+G Y R +R AT R+ + + + Q + + P++ + NT +FV
Sbjct: 195 MNEMHGQYVGERAIRCTLATTREEREREAKMNQQQ-QMYDPSRLHAPKATEEGENTCVFV 253
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGLD +V+ + LR F G+IA ++IP G+GCGFV F +R+NAE A+ L G I
Sbjct: 254 GGLDESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHRKNAEAAISTLQGLRINGYK 313
Query: 121 VRLSWG 126
VRLSWG
Sbjct: 314 VRLSWG 319
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQF 98
GP + D S IFVG LD VT++ L F++ Y I S K+ + KG GF++F
Sbjct: 129 GPPPQADWS---IFVGDLDYTVTEQQLHGAFAKKYRSILSTKLVIDMSTGLSKGFGFIKF 185
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
+ + A+++++G +G++++R + ++ A Q
Sbjct: 186 GSEAERDSAMNEMHGQYVGERAIRCTLATTREEREREAKMNQQ 228
>gi|115385346|ref|XP_001209220.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196912|gb|EAU38612.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 82/152 (53%), Gaps = 23/152 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSQGGYA-------------------S 39
+ + GVYC +P+ ++T P+++ G + GYA S
Sbjct: 113 LADRRGVYCG-KPLPCASSTAHPQETRGPRCCSPGANGYAPARTAACNLPDGPPPPIGPS 171
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFA 99
GAP Q D +NTT+FVGGL VT+++LR F +GEI VKIP GKGCGFVQF
Sbjct: 172 TGAP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFV 230
Query: 100 NRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
R AE A++++ G IG VRLSWGR+ N
Sbjct: 231 QRHAAEMAINQMQGYPIGNSRVRLSWGRSQNN 262
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G+I VKIPVGKGCGFVQ+ R +AE A+ K+
Sbjct: 290 DPNNTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFVQYVTRSSAELAISKM 349
Query: 112 NGTVIGKQSVRLSWGRNPAN 131
G IG +RLSWGR+ +N
Sbjct: 350 QGYPIGNSRIRLSWGRSNSN 369
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 56 TTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 108
+IFVG L P+V+D L + F S+Y ++ KI + KG GFV+F N + AL
Sbjct: 147 VSIFVGDLAPDVSDTILYEYFGSKYPSVSGTKIMIDSLTGGSKGYGFVRFINELEQKRAL 206
Query: 109 HKLNGTVIGKQSVRLS 124
++ G ++ + +R+S
Sbjct: 207 VEMQGAILNGRPIRVS 222
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+
Sbjct: 607 TSSDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKPDAERAI 666
Query: 109 HKLNGTVIGKQSVRLSWGRN 128
K+ G IG +RLSWGR+
Sbjct: 667 EKMQGFPIGGSRIRLSWGRS 686
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 492 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 551
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 552 QGFPIGGSKIRLSWGRS 568
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 26/137 (18%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
SSRP + A+ +S S GG + AP Q PQ + + S IFVG L P ++
Sbjct: 172 SSRPFVLNWASSVPASATGASASFSGGAYPSSAPQQ-PQYQKEYS---IFVGDLAPETSN 227
Query: 70 EDL--------------RQP--FSQYGEIASVKIP------VGKGCGFVQFANRENAEEA 107
DL R+P + S KI V +G GFV+F + + + A
Sbjct: 228 SDLVAVFRNPVLGLRNDREPKYIRPFLSCKSAKIMLDPVTGVSRGYGFVRFTDEADQQRA 287
Query: 108 LHKLNGTVIGKQSVRLS 124
L +++G + +R+S
Sbjct: 288 LIEMHGLYCLSRPMRIS 304
>gi|392568189|gb|EIW61363.1| hypothetical protein TRAVEDRAFT_26986 [Trametes versicolor
FP-101664 SS1]
Length = 950
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P + ++ LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 613 TSSDPYNTTVFVGGLSPLINEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 672
Query: 109 HKLNGTVIGKQSVRLSWGRN 128
K+ G IG +RLSWGR+
Sbjct: 673 EKMQGFPIGGSRIRLSWGRS 692
>gi|443897314|dbj|GAC74655.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 979
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 577 SAADPNNTTVFVGGLSSLISESTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 636
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
++NG I +RLSWGR+ +K
Sbjct: 637 QRMNGFPILNSKIRLSWGRSQGDK 660
>gi|395329881|gb|EJF62266.1| hypothetical protein DICSQDRAFT_135856 [Dichomitus squalens
LYAD-421 SS1]
Length = 973
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P ++++ LR F+ +GEI VK+PVGK CGFVQF + +AE A+
Sbjct: 621 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAI 680
Query: 109 HKLNGTVIGKQSVRLSWGRN 128
K+ G IG +RLSWGR+
Sbjct: 681 EKMQGFPIGGSRIRLSWGRS 700
>gi|71005504|ref|XP_757418.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
gi|46096901|gb|EAK82134.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
Length = 1059
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 34 QGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
QGG +SN S D +NTT+FVGGL +++ LR+ F +GEI+ VKIP GKGC
Sbjct: 604 QGGSSSNPN-----DSAADPNNTTVFVGGLSSLISEVTLRRYFEHFGEISYVKIPPGKGC 658
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANK 132
GFVQ+ +++AE A+ ++NG I +RLSWGR+ +K
Sbjct: 659 GFVQYVRKQDAETAIQRMNGFPILNSKIRLSWGRSQGDK 697
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +G+I VK+P+GK CGFVQF + +AE A+ K+
Sbjct: 574 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAIEKM 633
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 634 QGFPIGGSRIRLSWGRS 650
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P +++E LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 577 DPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 636
Query: 112 NGTVIGKQSVRLSWGR 127
G IG +RLSWGR
Sbjct: 637 QGFPIGGSRIRLSWGR 652
>gi|343427154|emb|CBQ70682.1| related to NAM8-meiotic recombination protein [Sporisorium
reilianum SRZ2]
Length = 968
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVGGL +++ LR+ F +GEI VKIP GKGCGFVQ+ +++AE A+
Sbjct: 572 SAADPNNTTVFVGGLSSLISEATLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAI 631
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
++NG I +RLSWGR+ +K
Sbjct: 632 QRMNGFPILNSKIRLSWGRSQGDK 655
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+++LR+ F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 240 DPNNTTVFVGGLSSLVTEDELREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKM 299
Query: 112 NGTVIGKQSVRLSWGR 127
G I +RLSWGR
Sbjct: 300 QGFPIANSRIRLSWGR 315
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 48 QSEGDSSN-TTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFA 99
Q+ ++SN +IFVG L PNVT+ L F ++Y KI V +G GFV+F
Sbjct: 104 QASSNASNGYSIFVGDLSPNVTEAQLFDLFINKYASTDHAKIVYDQATGVSRGYGFVRFN 163
Query: 100 NRENAEEALHKLNGTVIGKQSVRL 123
+ + + AL ++ G + +++++
Sbjct: 164 SLMDQQHALLEMQGIFLNGRAIKI 187
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
G P D NTT+FVGGL P +++E LR F+ +G I VK+P GK CGFVQF + +
Sbjct: 390 GNDPLVPSDPQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSD 449
Query: 104 AEEALHKLNGTVIGKQSVRLSWGRNP 129
AE A+ L+G I VRLSWGR P
Sbjct: 450 AERAIEALSGFSIAGSKVRLSWGRIP 475
>gi|440795338|gb|ELR16465.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 424
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQS-----EGDSSN 55
MTEM G+ SR +R+ ATP+KSS G G G G S + D SN
Sbjct: 193 MTEMQGMMLGSRALRLSQATPKKSSSMGGGMGMPMGMPMGGGGGGGGHSAPMPEQADPSN 252
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIFVG LD V +++LR F +GE+ V++P GK CGFVQF +R AE A+ +++G
Sbjct: 253 TTIFVGNLDSTVGEDELRGHFMPFGELVYVRVPPGKNCGFVQFVHRSCAENAMLRVHGKT 312
Query: 116 IG 117
IG
Sbjct: 313 IG 314
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRE 102
SE D T++VG +D + + + F E+A+VKI K G GFV+F + E
Sbjct: 14 SEADKR--TLWVGDIDRWMDENYIVALFGSAAEVANVKIIRDKMTGLPAGYGFVEFKSHE 71
Query: 103 NAEEALHKLNGTVI--GKQSVRLSWG 126
A L+ N I +S RL+W
Sbjct: 72 GAARVLNDFNNVPIPGVGRSFRLNWA 97
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 533 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKM 592
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 593 QGFPIGGSRIRLSWGRS 609
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 36/148 (24%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
S+RP + A S Q + + N PGQ Q E +IFVG L P ++
Sbjct: 213 STRPFTLNWA-----SSIPQSALNTSMHPPNSVPGQPFQKE-----YSIFVGDLAPEASN 262
Query: 70 EDL--------------RQP--FSQYGEIASVKIP------VGKGCGFVQFANRENAEEA 107
DL R+P + S KI V KG GFV+F + + + A
Sbjct: 263 SDLVAVFRNPVLGLRNDREPKFIRPFLSCKSAKIMLDPATGVSKGYGFVRFTDEADQQRA 322
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFR 135
L +++G + +R+S PA +F+
Sbjct: 323 LVEMHGLYCLSRPMRIS----PATAKFK 346
>gi|260940363|ref|XP_002614481.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
gi|238851667|gb|EEQ41131.1| hypothetical protein CLUG_05259 [Clavispora lusitaniae ATCC 42720]
Length = 651
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 48/183 (26%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY-----ASNGAPGQGPQSE----- 50
+ EMNG + RP+R+ ATPR ++ ++ + Y A +P PQ
Sbjct: 249 LREMNGAWFGGRPLRVALATPRNTALLRKSPDQKNMYSGLSPAVPQSPAMIPQEFMYMGG 308
Query: 51 -------------------------------------GDSSNTTIFVGGLDPNVTDEDLR 73
D SNTT+FVGGL V+++ L
Sbjct: 309 PQGSGGPPGPMNSSYGYFPPMMGDKNEFGMNMAGHPYSDPSNTTVFVGGLRSEVSEQTLF 368
Query: 74 QPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA-NK 132
F +G I +KIP GK CGF++++ RE AEEA+ + G +IG VRL WGR A NK
Sbjct: 369 TLFKPFGTIQQIKIPPGKNCGFLKYSTREEAEEAIQAMEGFIIGGNRVRLGWGRVSANNK 428
Query: 133 QFR 135
+F
Sbjct: 429 KFH 431
>gi|254577373|ref|XP_002494673.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
gi|238937562|emb|CAR25740.1| ZYRO0A07018p [Zygosaccharomyces rouxii]
Length = 558
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL V +++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 279 DPNNTTVFVGGLSSLVAEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRISAETAIAKM 338
Query: 112 NGTVIGKQSVRLSWGR 127
G IG VRLSWGR
Sbjct: 339 QGFPIGNSRVRLSWGR 354
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
++FVG L PNVT+ L + F S++ + VKI V KG FV+F N + + AL
Sbjct: 146 SVFVGDLAPNVTESQLFELFISRFNSTSHVKIVYDQLTGVSKGYAFVKFTNPAHQQRALL 205
Query: 110 KLNGTVIGKQSVRLS 124
++ G + +++R+S
Sbjct: 206 EMQGIFLSGRAIRVS 220
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P ++++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 542 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAIEKM 601
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 602 QGFPIGGSRIRLSWGRS 618
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL V++++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ K+
Sbjct: 269 DPNNTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKM 328
Query: 112 NGTVIGKQSVRLSWGR 127
G IG +RLSWGR
Sbjct: 329 QGYPIGNSRIRLSWGR 344
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
++FVG + PNV++ L + F S+Y + KI V KG GFV+F + AL
Sbjct: 134 SVFVGDIAPNVSEAQLFELFISRYASTLNAKIVFDQMTGVSKGYGFVKFGQESEQQRALL 193
Query: 110 KLNGTVIGKQSVRLS 124
++ G + ++VR+S
Sbjct: 194 EMQGVFLNGRAVRVS 208
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+E LR F +G I VKIP+GKGCGFVQ+ +R +AE A+ ++
Sbjct: 322 DPNNTTVFVGGLSSMVTEEQLRHCFQPFGTIIYVKIPIGKGCGFVQYFDRISAETAILRM 381
Query: 112 NGTVIGKQSVRLSWGR 127
G IG +RLSWGR
Sbjct: 382 QGFPIGNSRIRLSWGR 397
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PVGKG--C-GFV 96
GQ P + S+N ++FVG L NVT+ L F S++ KI PV + C GFV
Sbjct: 163 GQVPST---STNYSVFVGDLAANVTEGQLFDLFISRFQSTCHAKIVHDPVTRASKCYGFV 219
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL 123
+F + + + AL ++ G + +++++
Sbjct: 220 KFNDLRDQQRALVEMQGIFLNGRAIKI 246
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL V+++DLRQ F +G+I VKIP GKGCGFVQ+ +R +AE A+ K+
Sbjct: 279 DPNNTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKM 338
Query: 112 NGTVIGKQSVRLSWGR 127
G + +RLSWGR
Sbjct: 339 QGFPLANSRIRLSWGR 354
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDL------RQPFSQYGEIASVKIP-VGKGCGFVQFANR 101
+ G++S ++FVG L PNVT+ L R P + + ++ ++ V K GFV+F +
Sbjct: 130 ANGNNSGFSVFVGDLSPNVTEAQLFELFIGRYPSTCHAKVVHDQLTGVSKCYGFVKFNSA 189
Query: 102 ENAEEALHKLNGTVIGKQSVRL 123
+ + L ++ G + +S+++
Sbjct: 190 TDQQRVLVEMQGVFLNGRSIKV 211
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGE-------IASVKIPVGKGCGFVQFANRENA 104
++ ++ +++G LDPN + +RQ + GE + + + V +G FV+F + E+
Sbjct: 43 NTGSSQLYMGDLDPNWDENVIRQIWRDLGESNVHVKMMWNSNLGVNQGYCFVEFPSMEHG 102
Query: 105 EEALHKLNGTVI---GKQSVRLSWGRNPAN 131
AL K NG VI ++ ++L+W AN
Sbjct: 103 NNALLK-NGIVIPGFPQRRLKLNWASAGAN 131
>gi|254579785|ref|XP_002495878.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
gi|238938769|emb|CAR26945.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
Length = 716
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV+F R +AE A+ +
Sbjct: 417 DPNNTTVFIGGLTPKINENQLQTLFSPFGNILTVKIPQGKNCGFVKFEKRIDAEAAIQGM 476
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRADYGN 140
G V+G +RLSWGRN + A GN
Sbjct: 477 QGFVVGGCPIRLSWGRNTVSTPTSAGTGN 505
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQ-YG 80
+SSG + Q + N A G QS S ++FVG L P T+ DL F Q +
Sbjct: 188 QSSGLATNPTGQRNFRLNWASGATLQSSIPSRPEFSLFVGDLSPTATEADLLSLFQQKFK 247
Query: 81 EIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 126
+ +V++ P+ + GFV+F N E AL ++NG + +R+++
Sbjct: 248 SVKTVRVMTDPITGASRCFGFVRFGNEEERRRALVEMNGVWCQGRCLRVAYA 299
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ 30
+ EMNGV+C R +R+ ATPR + +Q Q
Sbjct: 281 LVEMNGVWCQGRCLRVAYATPRNNMMWQVQ 310
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P V ++ LR+ F +G I S+KIP GK CGFV+F ++ +AE A+ L
Sbjct: 463 DPTNTTVFVGGLGPTVQEQQLRKIFQPFGNILSIKIPPGKNCGFVKFEHKIDAEAAIQGL 522
Query: 112 NGTVIGKQSVRLSWGRNPANKQF 134
G V+ + +RLSWGRN K
Sbjct: 523 QGFVLVENPIRLSWGRNHVAKNM 545
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++FVG L P T+ DL F +++ + +V++ P+ + GFV+F N E AL
Sbjct: 235 SLFVGDLSPTATEADLLSLFQTKFKSVKTVRVMTDPITGASRCFGFVRFGNEEERRRALI 294
Query: 110 KLNGTVIGKQSVRLSWG 126
++NG +++R+++
Sbjct: 295 EMNGVHFQGRTLRVAYA 311
>gi|385302315|gb|EIF46452.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 207
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 44 GQGPQSEG-DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
G P S G D +NTT+FVGG++ +V+++ LR F +G+I +V +P GKGCGFV+F E
Sbjct: 51 GSAPYSGGQDPNNTTVFVGGINSSVSEDALRSLFDPFGDIVNVCVPPGKGCGFVRFTTHE 110
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYG 139
+A++A++++ G V+G +RL WGR+ +Q+R G
Sbjct: 111 SAQQAVNEMQGFVLGGSRIRLRWGRSGQRRQWRQKTG 147
>gi|238600700|ref|XP_002395212.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
gi|215465560|gb|EEB96142.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P + ++ LR F+ +G+I VK+PVGK CGFVQF + +AE A+ K+
Sbjct: 113 DPYNTTVFVGGLSPLINEDTLRTFFAPFGDIHYVKVPVGKNCGFVQFVRKADAERAIEKM 172
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 173 QGFPIGGSRIRLSWGRS 189
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D SNTT+F+GGL+ +T+ L+ F +G I SVK+P GKGCGFV+F +R +AE A+ +
Sbjct: 394 DPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGM 453
Query: 112 NGTVIGKQSVRLSWGRN 128
G ++G ++RLSWGR
Sbjct: 454 QGFIVGNSAIRLSWGRT 470
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY 31
+ EMNG++C R +R+ ATPR + QQQ
Sbjct: 222 LVEMNGIWCQGRQLRVAYATPRNNILQQQQI 252
>gi|358056882|dbj|GAA97232.1| hypothetical protein E5Q_03908 [Mixia osmundae IAM 14324]
Length = 683
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +++E LR F +G+I VKIP KGCGFVQF R++AE A+ K+
Sbjct: 381 DPNNTTVFVGGLPACISEETLRNFFQHFGDITYVKIPPNKGCGFVQFVRRQDAELAILKM 440
Query: 112 NGTVI-GKQSVRLSWGRNPANKQ 133
+ I GK +RLSWGR+ +KQ
Sbjct: 441 HDFPIHGKSRIRLSWGRSQGDKQ 463
>gi|449549395|gb|EMD40360.1| hypothetical protein CERSUDRAFT_110955 [Ceriporiopsis subvermispora
B]
Length = 709
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 55/80 (68%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+ D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF + +AE A+
Sbjct: 382 TSSDPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKPDAERAI 441
Query: 109 HKLNGTVIGKQSVRLSWGRN 128
K+ G IG +RLSWGR+
Sbjct: 442 EKMQGFPIGGSRIRLSWGRS 461
>gi|331220231|ref|XP_003322791.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301781|gb|EFP78372.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 897
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D SNTT+FVGGL +++ L+ F +GEI VKIP KGCGFVQ+ RE+A++A+ K+
Sbjct: 637 DPSNTTVFVGGLPACISEGTLKTFFQNFGEITYVKIPPNKGCGFVQYVRREDAQQAMLKM 696
Query: 112 NGTVI-GKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 170
+ I GK +RLSWGR+ +KQ +Y + S A G ++ + I DPSM
Sbjct: 697 HDFPIHGKSRIRLSWGRSLGDKQ--VEYVKKLSSAL--GISFESV-WKIVQGQDPSMIKQ 751
Query: 171 AAAAYG 176
A+ G
Sbjct: 752 IASTLG 757
>gi|149242856|ref|XP_001526474.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450597|gb|EDK44853.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 692
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D+SNTT+FVGGL VT+ L F +G I +KIP GK CGFV++A RE AEE + +
Sbjct: 350 DTSNTTVFVGGLSSEVTEATLFTLFKPFGTILQIKIPPGKNCGFVKYATREEAEETISAM 409
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
G +IG VRLSWGR N +
Sbjct: 410 QGFIIGGNRVRLSWGRVSMNNR 431
>gi|2130979|dbj|BAA11919.1| csx1+ [Schizosaccharomyces pombe]
Length = 125
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQ 97
SN P Q S D NTT+FVGGL N++++DL+ F +G I ++KIP GKGCGFVQ
Sbjct: 12 TSNRQPNQDLCSM-DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQ 70
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
++ + AE+A++ + G ++G +RL+WG N
Sbjct: 71 YSEKSAAEKAINTMQGALVGTSHIRLAWGHN 101
>gi|365987806|ref|XP_003670734.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
gi|343769505|emb|CCD25491.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG 94
G SNG QG S +S N+TIFVGGL +V++++L + F +GEI VKIP+GK CG
Sbjct: 289 GNLRSNGNIRQGLGS--NSKNSTIFVGGLSTDVSEQELNELFRPFGEIMDVKIPLGKKCG 346
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDG 154
FV F R +A+ A+ L+G ++ +RLSWG+ N D + + ++ G YD
Sbjct: 347 FVTFKRRIDAKAAIKGLHGFLVRGCPIRLSWGKTFNNT---VDLTSGTTRSFNSG--YDS 401
Query: 155 -YGYAIPPPNDPSMYAAAAAAYGAYPV 180
+ Y P Y+ +AA+ YP+
Sbjct: 402 PFKYTFPD------YSNCSAAWTNYPI 422
>gi|444322688|ref|XP_004181985.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
gi|387515031|emb|CCH62466.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
Length = 674
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL V++ +LR F +G I VKIPVGKGCGFVQ+ +R AE A+ K+
Sbjct: 336 DPNNTTVFIGGLSSLVSEGELRSYFQPFGTIVYVKIPVGKGCGFVQYVDRSAAETAISKM 395
Query: 112 NGTVIGKQSVRLSWGR 127
G IG +RLSWGR
Sbjct: 396 QGFPIGNSRIRLSWGR 411
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
++FVG L PNVT+ L F ++Y KI V KG GFV+F N + + +L+
Sbjct: 174 SVFVGDLAPNVTEAQLFDLFINRYSSTIHAKIVYDQMTNVSKGYGFVRFNNSADQQRSLN 233
Query: 110 KLNGTVIGKQSVRLS 124
++ G + +S+R+S
Sbjct: 234 EMQGVFLNGRSIRVS 248
>gi|443926790|gb|ELU45354.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 886
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 30 QYSSQGGYASNGAPGQ------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIA 83
+ +S+GG S GA + G + D NTT+FVGGL + +E LR F+ +GEI
Sbjct: 472 EIASRGGGLSEGARLESARALLGVLNSADPYNTTVFVGGLSGLIAEETLRGFFAPFGEIH 531
Query: 84 SVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
VKIP GKGCGFVQF + +AE A+ ++ G IG +RLSWGR
Sbjct: 532 YVKIPPGKGCGFVQFVRKADAERAIERMQGYPIGGGKIRLSWGRT 576
>gi|401625439|gb|EJS43448.1| nam8p [Saccharomyces arboricola H-6]
Length = 527
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 313 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAISGM 372
Query: 112 NGTVIGKQSVRLSWGR 127
G I VRLSWGR
Sbjct: 373 QGFPIANSRVRLSWGR 388
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N +
Sbjct: 165 NNYSIFVGDLAPNVTESQLFELFINRYASASHAKIVHDQVTGMSKGYGFVKFNNADEQHL 224
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 225 ALSEMQGVFLNGRAIKV 241
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL P ++++ LR F+ +G+I VK+P GK CGFVQF + +AE A+ ++
Sbjct: 575 DPYNTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAIERM 634
Query: 112 NGTVIGKQSVRLSWGRN 128
G IG +RLSWGR+
Sbjct: 635 QGFPIGGSRIRLSWGRS 651
>gi|365760349|gb|EHN02076.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 513
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 301 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 360
Query: 112 NGTVIGKQSVRLSWGR 127
G I VRLSWGR
Sbjct: 361 QGFPIANSRVRLSWGR 376
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEEALH 109
+IFVG L PNVT+ L F ++Y + KI + KG GFV+F N + AL
Sbjct: 153 SIFVGDLAPNVTESQLFGLFINRYASASHAKIVHDQVTGMSKGYGFVKFTNAGEEQLALS 212
Query: 110 KLNGTVIGKQSVRL 123
++ G + +++++
Sbjct: 213 EMQGVFLNGRAIKV 226
>gi|151944033|gb|EDN62326.1| RNA-binding protein [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 36/163 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
VKIPVGKGCGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 342 VKIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L NVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAANVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|323304584|gb|EGA58347.1| Nam8p [Saccharomyces cerevisiae FostersB]
Length = 523
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 36/163 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
VKIPVGKGCGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 342 VKIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|365765198|gb|EHN06710.1| Nam8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV 85
G+++ + SQ Y P + D +NTT+F+GGL VT+++LR F +G I V
Sbjct: 285 GFKRNHMSQFIYPVQQQPSLNHFT--DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYV 342
Query: 86 KIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
KIPVGKGCGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 343 KIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|259146840|emb|CAY80096.1| Nam8p [Saccharomyces cerevisiae EC1118]
gi|323348251|gb|EGA82500.1| Nam8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 523
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV 85
G+++ + SQ Y P + D +NTT+F+GGL VT+++LR F +G I V
Sbjct: 285 GFKRNHMSQFIYPVQQQPSLNHFT--DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYV 342
Query: 86 KIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
KIPVGKGCGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 343 KIPVGKGCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|349578638|dbj|GAA23803.1| K7_Nam8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298893|gb|EIW09988.1| Nam8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 112 NGTVIGKQSVRLSWGR 127
G I VRLSWGR
Sbjct: 369 QGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|256269427|gb|EEU04722.1| Nam8p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 309 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 368
Query: 112 NGTVIGKQSVRLSWGR 127
G I VRLSWGR
Sbjct: 369 QGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|367016893|ref|XP_003682945.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
gi|359750608|emb|CCE93734.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
Length = 617
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+NTT+F+GGL P + + L+ FS +G I +VKIP GK CGFV++ NR +AE A+ + G
Sbjct: 384 NNTTVFIGGLTPKINEAQLQALFSPFGNILTVKIPQGKNCGFVKYENRIDAEAAIQGMQG 443
Query: 114 TVIGKQSVRLSWGRN 128
++G VRLSWGRN
Sbjct: 444 FIVGGNPVRLSWGRN 458
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQ-YG 80
+S+ S Q + N A G QS S ++FVG L P T+ DL F Q +
Sbjct: 169 RSTNLPTNPSGQRNFRLNWASGATLQSSIPSRPEFSLFVGDLSPTATEADLLSLFQQKFR 228
Query: 81 EIASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 126
+ +V++ P+ + GFV+F N E AL ++NG + +R+++
Sbjct: 229 SVKTVRVMTDPITGASRCFGFVRFGNEEERRRALVEMNGVWCQGRCLRVAYA 280
>gi|323308830|gb|EGA62067.1| Nam8p [Saccharomyces cerevisiae FostersO]
Length = 466
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+F+GGL VT+++LR F +G I VKIPVGKGCGFVQ+ +R +AE A+ +
Sbjct: 252 DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKGCGFVQYVDRLSAEAAIAGM 311
Query: 112 NGTVIGKQSVRLSWGR 127
G I VRLSWGR
Sbjct: 312 QGFPIANSRVRLSWGR 327
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 104 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 163
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 164 ALSEMQGVFLNGRAIKV 180
>gi|388580130|gb|EIM20447.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 681
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D NTT+FVGGL ++++ LR F+ +G I VKIP GKGCGFVQF + +AE A+ ++
Sbjct: 308 DPHNTTVFVGGLSSLISEDTLRVFFAPFGAITYVKIPPGKGCGFVQFVRKADAERAIERM 367
Query: 112 NGTVIGKQSVRLSWGRNPANK 132
G IG +RLSWGR+ ++K
Sbjct: 368 QGFPIGGGRIRLSWGRSQSDK 388
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 13/81 (16%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-------YGEIASVKIPVGKGCG------FVQFANREN 103
++FVG L P+ T+ DL + F + +VKI G FV+F+N +
Sbjct: 133 SVFVGDLSPDATEHDLMRAFQHPPNLSNPFTTCTNVKIMTDNATGSSRCFGFVRFSNEDE 192
Query: 104 AEEALHKLNGTVIGKQSVRLS 124
AL ++ G + + +RLS
Sbjct: 193 MIRALDEMQGIPVAGRPIRLS 213
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 45 QGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
Q PQS D +NTT+F+GGL P + ++ L F +G I VKIP GKGCGF++F RE
Sbjct: 374 QTPQSVPYTDPTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKRE 433
Query: 103 NAEEALHKLNGTVIGKQSVRLSWGR 127
+AE A+ + G IG VRLSWGR
Sbjct: 434 DAEAAIAGMQGFQIGGSRVRLSWGR 458
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSS 33
+TEM GV+C+ RP+R+ ATPR S Q +S
Sbjct: 235 LTEMQGVWCAGRPLRVALATPRNQSNQTNQTNS 267
>gi|331220241|ref|XP_003322796.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301786|gb|EFP78377.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 666
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 81/141 (57%), Gaps = 16/141 (11%)
Query: 5 NGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY---ASNGAP-GQGPQSE-------GDS 53
NG++ P IGAA+ + Y YSS GY AP PQ+ D
Sbjct: 92 NGIF----PSPIGAASLNSTQAYYPAYSSYNGYPLAIPIAAPLATMPQTSFQENSPNDDP 147
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
S+TT+FV GL +T++ L+ F +GEIA VKIP KG GFV++ RE+A++A+ K+N
Sbjct: 148 SSTTVFVAGLPACITEDTLKTFFQNFGEIAYVKIPPHKGYGFVKYVRREDAKQAIIKMND 207
Query: 114 TVIGKQS-VRLSWGRNPANKQ 133
I ++S +RLSWGR+ +K+
Sbjct: 208 FPIHEKSRIRLSWGRSLGDKK 228
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G Q S + GP NT++++
Sbjct: 89 IEQMNGQWLGRRTIRTNWAT-RKPTGTDGQQSKPELSYDDVFNQTGP------DNTSVYI 141
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ +V DEDLR F ++G I V+I +G FV+F +++A A+ K+NGT IG Q+
Sbjct: 142 GNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKDSACNAIVKMNGTEIGGQT 201
Query: 121 VRLSWGRNPA---NKQFRADYGNQWSGAY 146
V+ SWGR P N+Q A NQ GAY
Sbjct: 202 VKCSWGRTPEGHNNQQNAAANYNQMQGAY 230
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +F+G L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 14 NWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKG 73
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 74 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT 112
>gi|323356144|gb|EGA87949.1| Ngr1p [Saccharomyces cerevisiae VL3]
Length = 562
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 248 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 307
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 308 QGFIVGGSPIRLSWGR 323
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D +NTT+FVGGL V+++ L F +G + +KIP GK CGFV+++ RE AE+A
Sbjct: 386 QPYNDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFVKYSTREEAEDA 445
Query: 108 LHKLNGTVIGKQSVRLSWGRNPA-NKQFR 135
+ + G +IG VRLSWGR NK+F+
Sbjct: 446 IASMQGYIIGGNRVRLSWGRVSVNNKKFQ 474
>gi|323337302|gb|EGA78555.1| Nam8p [Saccharomyces cerevisiae Vin13]
Length = 523
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV 85
G+++ + SQ Y P + D +NTT+F+GGL VT+++LR F +G I V
Sbjct: 285 GFKRNHMSQFIYPVQQQPSLNHFT--DPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYV 342
Query: 86 KIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
KIPVGK CGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 343 KIPVGKXCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|392301060|gb|EIW12149.1| Ngr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 670
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|349576587|dbj|GAA21758.1| K7_Ngr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 671
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|365766915|gb|EHN08404.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 669
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 415 QGFIVGGSPIRLSWGR 430
>gi|398365523|ref|NP_009771.3| Ngr1p [Saccharomyces cerevisiae S288c]
gi|585555|sp|P32831.2|NGR1_YEAST RecName: Full=Negative growth regulatory protein NGR1; AltName:
Full=RNA-binding protein RBP1
gi|536596|emb|CAA85176.1| NGR1 [Saccharomyces cerevisiae]
gi|285810543|tpg|DAA07328.1| TPA: Ngr1p [Saccharomyces cerevisiae S288c]
Length = 672
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|6321878|ref|NP_011954.1| Nam8p [Saccharomyces cerevisiae S288c]
gi|730108|sp|Q00539.2|NAM8_YEAST RecName: Full=Protein NAM8
gi|487934|gb|AAB68928.1| Nam8p: Putative RNA binding proteins [Saccharomyces cerevisiae]
gi|520596|dbj|BAA02016.1| Mre2 protein [Saccharomyces cerevisiae]
gi|190405867|gb|EDV09134.1| RNA-binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207344656|gb|EDZ71726.1| YHR086Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285809994|tpg|DAA06781.1| TPA: Nam8p [Saccharomyces cerevisiae S288c]
gi|323333247|gb|EGA74645.1| Nam8p [Saccharomyces cerevisiae AWRI796]
Length = 523
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 36/163 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
VKIPVGK CGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 342 VKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG GFV+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|256270156|gb|EEU05383.1| Ngr1p [Saccharomyces cerevisiae JAY291]
Length = 673
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|190408636|gb|EDV11901.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
RM11-1a]
gi|290878229|emb|CBK39288.1| Ngr1p [Saccharomyces cerevisiae EC1118]
Length = 670
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|4026|emb|CAA46011.1| NAM8 [Saccharomyces cerevisiae]
gi|228931|prf||1814447B NAM8 gene
Length = 523
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 36/163 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------------PRKSSGYQQQ-----YSSQG-GYASNGA 42
++EM GV+ + R +++G + R SS + + S+G + SNG
Sbjct: 222 LSEMQGVFLNGRAIKVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGN 281
Query: 43 PGQGPQSE------------------GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIAS 84
G + D +NTT+F+GGL VT+++LR F +G I
Sbjct: 282 NNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVY 341
Query: 85 VKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
VKIPVGK CGFVQ+ +R +AE A+ + G I VRLSWGR
Sbjct: 342 VKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGR 384
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
+N +IFVG L PNVT+ L + F ++Y + KI + KG V+F N + +
Sbjct: 161 NNCSIFVGDLAPNVTESQLLELFINRYASTSHAKIVHDQVTGMSKGYVLVKFTNSDEQQL 220
Query: 107 ALHKLNGTVIGKQSVRL 123
AL ++ G + +++++
Sbjct: 221 ALSEMQGVFLNGRAIKV 237
>gi|4031|emb|CAA78478.1| Negative growth regulatory protein [Saccharomyces cerevisiae]
Length = 672
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|207347548|gb|EDZ73682.1| YBR212Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 617
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL V + L F +G I VKIP GK CGFV+++ R+ AEEA+ +
Sbjct: 445 DPNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAM 504
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
G +IG VRLSWGR N +
Sbjct: 505 QGFIIGGNRVRLSWGRVSMNNK 526
>gi|151946599|gb|EDN64821.1| glucose-repressible RNA binding protein [Saccharomyces cerevisiae
YJM789]
Length = 670
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVTIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|448111139|ref|XP_004201770.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359464759|emb|CCE88464.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++ R+ AE+A
Sbjct: 416 QPFADPKNTTVFVGGLSSEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDA 475
Query: 108 LHKLNGTVIGKQSVRLSWGR-NPANKQF 134
+ + G +IG VRLSWG+ + NK+F
Sbjct: 476 IASMQGFIIGGNRVRLSWGKVSTNNKKF 503
>gi|448097114|ref|XP_004198591.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
gi|359380013|emb|CCE82254.1| Piso0_001971 [Millerozyma farinosa CBS 7064]
Length = 655
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D NTT+FVGGL V D+ L F +G I VKIP GK CGF++++ R+ AE+A
Sbjct: 416 QPFADPKNTTVFVGGLSAEVNDQTLFALFKPFGIIQQVKIPPGKNCGFIKYSKRQEAEDA 475
Query: 108 LHKLNGTVIGKQSVRLSWGR-NPANKQF 134
+ + G +IG VRLSWG+ + NK+F
Sbjct: 476 IASMQGFIIGGNRVRLSWGKVSTNNKKF 503
>gi|320584167|gb|EFW98378.1| RNA-binding post-transcriptional regulator csx1 [Ogataea
parapolymorpha DL-1]
Length = 485
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA----------PGQGP-QS 49
+ EM G RP+R+ A+ +++ + + +G P P Q
Sbjct: 213 LIEMQGYVLLGRPIRVSTASKSQTNAAANSSFASAMPSQDGLGQLKVNVPSLPQTAPLQY 272
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D +NTT+F+GGL+ +++ LR FS+YG+I+ VKIP GK CGFVQF +R +AE A+
Sbjct: 273 YNDPNNTTVFIGGLNVPISEMQLRALFSRYGDISYVKIPPGKNCGFVQFFHRASAEMAIS 332
Query: 110 KLNGTVI-GKQSVRLSWGRNPANKQFRA 136
++ G I G +R+SWG A + + A
Sbjct: 333 EMQGYDIGGGCRIRVSWGARAAQRNWFA 360
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 39 SNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPVG------K 91
S+GA Q +G S +IFVG L VT++ L Q F ++Y + K+ + K
Sbjct: 138 SSGANATAFQPKGQSE-YSIFVGDLPQTVTEQSLLQAFQARYPSCSGAKVMIDPATGHLK 196
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
G GFV+F N + + AL ++ G V+ + +R+S
Sbjct: 197 GYGFVKFLNETDQKRALIEMQGYVLLGRPIRVS 229
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 356 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 415
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 416 QGFIVGGSPIRLSWGR 431
>gi|365761964|gb|EHN03583.1| Ngr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 666
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P + LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTAEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 415 QGFIVGGSPIRLSWGR 430
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL P T+ LR F +G I +V+IP GK CGFV+F R +AE ++ L
Sbjct: 355 DPTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGL 414
Query: 112 NGTVIGKQSVRLSWGR 127
G ++G +RLSWGR
Sbjct: 415 QGFIVGGSPIRLSWGR 430
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 51/82 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++ RE AE + +
Sbjct: 422 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIGAM 481
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
G +IG VRLSWGR N +
Sbjct: 482 QGFIIGGNRVRLSWGRVSMNNK 503
>gi|383136461|gb|AFG49308.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136463|gb|AFG49309.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136465|gb|AFG49310.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136467|gb|AFG49311.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136469|gb|AFG49312.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136471|gb|AFG49313.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136473|gb|AFG49314.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136475|gb|AFG49315.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136477|gb|AFG49316.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136479|gb|AFG49317.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136481|gb|AFG49318.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136483|gb|AFG49319.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136485|gb|AFG49320.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136487|gb|AFG49321.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136489|gb|AFG49322.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136491|gb|AFG49323.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|383136493|gb|AFG49324.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
Length = 67
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 7/67 (10%)
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYG-------NQ 141
VGKGCGFVQFANR AEEAL +L+GTVI +Q++RLSWGR+PANKQ G NQ
Sbjct: 1 VGKGCGFVQFANRACAEEALQRLHGTVIRQQTIRLSWGRSPANKQQSQPQGQQPQSDPNQ 60
Query: 142 WSGAYYG 148
W+GAYYG
Sbjct: 61 WNGAYYG 67
>gi|361068433|gb|AEW08528.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
Length = 67
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 7/67 (10%)
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYG-------NQ 141
VGKGCGFVQFANR AEEAL +L+GTVI +Q++RLSWGR+PANKQ G NQ
Sbjct: 1 VGKGCGFVQFANRACAEEALQRLHGTVIRQQTIRLSWGRSPANKQNSQPQGQQPQSDPNQ 60
Query: 142 WSGAYYG 148
W+GAYYG
Sbjct: 61 WNGAYYG 67
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL VT+ L F +G I +KIP GK CGFV+++ RE AE + +
Sbjct: 472 DPNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIAAM 531
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
G +IG VRLSWG+ N +
Sbjct: 532 QGFIIGGNRVRLSWGKVSVNNK 553
>gi|361068435|gb|AEW08529.1| Pinus taeda anonymous locus CL263Contig2_03 genomic sequence
gi|376339252|gb|AFB34150.1| hypothetical protein CL263Contig2_03, partial [Pinus cembra]
Length = 67
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 7/67 (10%)
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYG-------NQ 141
VGKGCGFVQF+NR AEEAL +L+GTVI +Q++RLSWGR+PANKQ G NQ
Sbjct: 1 VGKGCGFVQFSNRACAEEALQRLHGTVIRQQTIRLSWGRSPANKQQPQPQGQQPQSDPNQ 60
Query: 142 WSGAYYG 148
W+GAYYG
Sbjct: 61 WNGAYYG 67
>gi|328858949|gb|EGG08060.1| hypothetical protein MELLADRAFT_31227 [Melampsora larici-populina
98AG31]
Length = 76
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D SNTT+FVGGL +++E L+ F +GEI VKIP KGCGFVQ+ R +AE A+ K+
Sbjct: 1 DPSNTTVFVGGLPACISEETLKTFFQNFGEITYVKIPPNKGCGFVQYVRRADAEAAMLKM 60
Query: 112 NGTVI-GKQSVRLSWG 126
+ I GK +RLSWG
Sbjct: 61 HDFPIHGKSRIRLSWG 76
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT+F+GGL + ++ L F+ +G I +VKIP GKGCGFV++A R +AE A+ + G
Sbjct: 405 NTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYRIDAEAAIQGMQGF 464
Query: 115 VIGKQSVRLSWGRN 128
++G +RLSWGR
Sbjct: 465 IVGGNPIRLSWGRT 478
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G Y S +R+ A P+ GP G TT+FV
Sbjct: 154 LEEMQGAYVGSSRIRVSVARPKAKIE------------------TGPVVSGPEEITTVFV 195
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGL+ +T+E+LR F +G I +VKI K F+Q+ + +AE+A+ +LNG+ +G
Sbjct: 196 GGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFIQYEKKSSAEQAISELNGSHLGGAK 255
Query: 121 VRLSWGRNPANKQFRADY 138
+RLS+GR N A Y
Sbjct: 256 LRLSFGRTQLNVNPSAHY 273
Score = 42.7 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDS-SNTTIFVGGLDPNVTDEDLRQ 74
G P + ++ +S++ SNG P Q P + + IFVG L +V D L
Sbjct: 57 GTQIPNTNKVFKLNWSNRD---SNGMPLLQRPTLMSNFLGDYCIFVGDLRADVDDNILLT 113
Query: 75 PF-SQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F S+Y AS K+ V KG GFV+F + + +L ++ G +G +R+S R
Sbjct: 114 TFQSRYKSAASAKVMVDPATGFSKGFGFVKFFDEIEQKRSLEEMQGAYVGSSRIRVSVAR 173
Query: 128 NPA 130
A
Sbjct: 174 PKA 176
>gi|308198150|ref|XP_001387102.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
gi|149389050|gb|EAZ63079.2| negative growth regulatory protein [Scheffersomyces stipitis CBS
6054]
Length = 690
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
+PG PQ D +NTT+FVGGL VT+ L F +G I VKIP GK CGF++++ R
Sbjct: 388 SPGVQPQPYTDPNNTTVFVGGLSSEVTESTLFTLFKPFGIIQQVKIPPGKNCGFIKYSTR 447
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR-NPANKQF 134
E AEEA+ + G +IG VRLSWGR + NK+F
Sbjct: 448 EEAEEAIAAMQGFIIGGNRVRLSWGRVSMNNKKF 481
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
S+TT+FVGGL+PN+ + L + F +G I VKIP GK CGFV++ R AE A++ L G
Sbjct: 443 SSTTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQG 502
Query: 114 TVIGKQSVRLSWGR 127
+I +RLSWGR
Sbjct: 503 FIIMGSPIRLSWGR 516
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPF-SQYGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++FVG L P T+ DL F ++Y + +V++ P+ + GFV+FAN AL
Sbjct: 160 SLFVGDLSPFATEADLLSLFQTKYNSVKTVRVMTDPITGASRCFGFVRFANETERRNALI 219
Query: 110 KLNGTVIGKQSVRLSWG---RNPANKQFRADYGNQ 141
++NG + +R+++ N A + + G Q
Sbjct: 220 EMNGVQFQGRQLRVAYATPRNNVAQQHLSGNLGQQ 254
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 35/157 (22%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+T MN C R +R+ A SS QQQ P S + IFV
Sbjct: 68 ITAMNARMCLGRELRVNWA----SSAIQQQ---------------TPHRPDTSKHHHIFV 108
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGT 114
G L P + DLR+ FS +GEI+ ++ KG GFV F N+++AE A+H ++G+
Sbjct: 109 GDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGS 168
Query: 115 VIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQ 150
+G +++R +W R P +K+ +G+Y GG
Sbjct: 169 WLGSRAIRTNWASRKPNHKE---------TGSYIGGH 196
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 54 SNTTIFVGGLDPNVTDED-LRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
SN T++ GGL+ + ED LRQ F ++GEI +++ KG F++F ++E+A A+ +
Sbjct: 212 SNCTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKDKGYAFIKFNSKESACRAIVARH 271
Query: 113 GTVIGKQSVRLSWGR--NPANKQFRAD--YGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 168
+ IG Q+V+ SWG+ PA QF D N W Y Y G Y MY
Sbjct: 272 NSDIGGQAVKCSWGKEQEPAQPQFPYDPYQMNYWYSGYSMDGNYMGGDYM------NQMY 325
Query: 169 AAA--AAAYGAYPV 180
AAA YG YP+
Sbjct: 326 AAAPYGQYYGQYPM 339
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD VT++ + FSQ G+I KI P FV+F N +A A+ +N
Sbjct: 14 TLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNHSDASSAITAMNA 73
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
+ + +R++W + +Q
Sbjct: 74 RMCLGRELRVNWASSAIQQQ 93
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 79.7 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQ-------------------------- 34
+ +MNG R +R+ A PR ++ Q+Q SQ
Sbjct: 240 LDKMNGTLLHGRQLRVALANPRNAN-LQEQAPSQVVEDKKKHNEPLLLETAKKLFSKELL 298
Query: 35 --GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N S+ D +NTT+FVG L+ +T+++L++ F +G I VKIP GK
Sbjct: 299 KNSSSNVNDVKSNEDHSDNDPTNTTVFVGNLNCKITEDELQKVFEPFGAIEKVKIPPGKK 358
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
CGFV+F N+ +AE +++ L G + +R+SW
Sbjct: 359 CGFVKFCNKIDAEASMYGLQGYFVAGSPIRISW 391
Score = 41.6 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 24 SSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQ-YGE 81
S+ + S Q + N A G QS ++ ++FVG L P T+ DL + F + +
Sbjct: 148 STELETNPSGQRTFRLNWASGATLQSSIPTTPEYSLFVGDLSPMTTEADLLKLFQKTFKS 207
Query: 82 IASVKI---PV---GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFR 135
+ +V++ P+ + GF++ ++ EEAL K+NGT++ + +R++ NP N +
Sbjct: 208 VKTVRVMTDPITGESRCFGFIRLSDEFEREEALDKMNGTLLHGRQLRVALA-NPRNANLQ 266
Query: 136 ADYGNQ 141
+Q
Sbjct: 267 EQAPSQ 272
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 79.3 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 45/183 (24%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK---------------------------SSGYQQQYSS 33
+ MNGV C SR R+ ATPR +S Y+Q ++
Sbjct: 242 LENMNGVMCHSRYFRLALATPRTNKFATSTNMTQVREDNDGRSNSVTNVHTSPYEQTTTN 301
Query: 34 QGGY--------------ASNGAPGQGPQS----EGDSSNTTIFVGGLDPNVTDEDLRQP 75
SN + Q Q+ D+SNTT+F+GGL + + +L+
Sbjct: 302 INISNKFIDKLDVNNFIPTSNNSLQQSAQNIDHVNLDNSNTTVFIGGLSTSTNEYELQVL 361
Query: 76 FSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFR 135
F +G I SVKIP+GK CGFV+F + A A+ + G +I +RLSWG++ N +
Sbjct: 362 FEPFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGMQGFIINGNPIRLSWGKSNNNASTK 421
Query: 136 ADY 138
++
Sbjct: 422 LNH 424
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKI---PV---GKGCGFVQFANRENAEEALH 109
++F+G L P T+ D+ F + Y + +V++ P+ +G GF++F++ + ++AL
Sbjct: 184 SLFIGDLSPLTTEADILSIFQKKYKSVKTVRVMTDPINGSSRGFGFIRFSDEDERKDALE 243
Query: 110 KLNGTVIGKQSVRLSWGRNPANK 132
+NG + + RL+ NK
Sbjct: 244 NMNGVMCHSRYFRLALATPRTNK 266
>gi|238881096|gb|EEQ44734.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 875
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++NRE AEEA+ +
Sbjct: 509 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 568
Query: 112 NGTVIGKQSVRLSWGR 127
G VIG VRLSWGR
Sbjct: 569 QGFVIGGNRVRLSWGR 584
>gi|68472181|ref|XP_719886.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
gi|68472416|ref|XP_719769.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441601|gb|EAL00897.1| hypothetical protein CaO19.14082 [Candida albicans SC5314]
gi|46441727|gb|EAL01022.1| hypothetical protein CaO19.6790 [Candida albicans SC5314]
Length = 887
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 53/76 (69%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++NRE AEEA+ +
Sbjct: 517 DPNNTTVFVGGLSSDVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSNREEAEEAIAAM 576
Query: 112 NGTVIGKQSVRLSWGR 127
G VIG VRLSWGR
Sbjct: 577 QGFVIGGNRVRLSWGR 592
>gi|294658145|ref|XP_002770728.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
gi|202952907|emb|CAR66259.1| DEHA2F02596p [Debaryomyces hansenii CBS767]
Length = 747
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANREN 103
GQ Q D +NTT+FVGGL VT++ L F +G I VKIP GK CGF+++++RE
Sbjct: 411 GQHGQPFTDPNNTTVFVGGLSSEVTEQTLFTLFKPFGIIQQVKIPPGKNCGFIKYSSREE 470
Query: 104 AEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AEEA+ + G +IG VRLSWGR N +
Sbjct: 471 AEEAIAAMQGFIIGGNRVRLSWGRVSMNNK 500
>gi|344301504|gb|EGW31816.1| hypothetical protein SPAPADRAFT_56576 [Spathaspora passalidarum
NRRL Y-27907]
Length = 632
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
Q D +NTT+FVGGL V++ L F +G I VKIP GK CGFV++ RE AEEA
Sbjct: 380 QPYADPTNTTVFVGGLSSEVSEPTLFTLFKPFGIIQQVKIPPGKNCGFVKYTTREEAEEA 439
Query: 108 LHKLNGTVIGKQSVRLSWGR-NPANKQF 134
+ + G +IG VRLSWGR +P NK++
Sbjct: 440 IAAMQGFIIGGNRVRLSWGRVSPTNKKY 467
>gi|164660242|ref|XP_001731244.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
gi|159105144|gb|EDP44030.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
Length = 564
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S D +NTT+FVG L T+ LR F+ YG I S+ IP G+ CGFVQFA++++A A+
Sbjct: 459 SALDPTNTTVFVGSLFSLATENTLRTLFAPYGPIQSINIPRGQDCGFVQFASKQDAARAI 518
Query: 109 HKLNG-TVIGKQSVRLSWGRNPANK 132
++ G ++G ++RLSWGR+ K
Sbjct: 519 AEMQGFQIVGGGALRLSWGRSVGEK 543
>gi|241953763|ref|XP_002419603.1| RNA-binding protein, putative; U1 snRNP protein, putative [Candida
dubliniensis CD36]
gi|223642943|emb|CAX43198.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 792
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FVGGL +V++ L F +G I VKIP GK CGFV+++ RE AEEA+ +
Sbjct: 461 DPNNTTVFVGGLSADVSEPTLHTLFKPFGLIQQVKIPPGKNCGFVKYSTREEAEEAIAAM 520
Query: 112 NGTVIGKQSVRLSWGR 127
G VIG VRLSWGR
Sbjct: 521 QGFVIGGNRVRLSWGR 536
>gi|15450878|gb|AAK96710.1| Unknown protein [Arabidopsis thaliana]
gi|21387095|gb|AAM47951.1| unknown protein [Arabidopsis thaliana]
Length = 481
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 108 LHKL-NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQV 151
+L N VI Q ++L+WGR ++ D NQ G + G +
Sbjct: 280 AQELSNRLVINGQRLKLTWGRPKPDR----DGANQQGGVAHSGLL 320
>gi|297849030|ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338238|gb|EFH68655.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
Length = 481
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ + ++D+R F YGEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 108 LHKL-NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQV 151
+L N V+ Q ++L+WGR ++ D NQ G + G +
Sbjct: 280 AQELANRLVVNGQRLKLTWGRPKPDQ----DGSNQQGGVAHSGLL 320
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+++M+G SR +R G A +Q +SQ +A+ +++ D N ++V
Sbjct: 168 LSQMSGTMLGSRRIRCGWAQ-------HKQENSQASFAAVDRVSTLSRAQADPENANVYV 220
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G L P+V+D +L+ SQ+G + VKI G F QFA+ +A A+ L+G +G ++
Sbjct: 221 GNLAPDVSDAELQTAVSQFGAVLDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKA 280
Query: 121 VRLSWGRNPANK 132
++ SWGR+ A K
Sbjct: 281 LKCSWGRHQARK 292
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENA 104
GD++ ++VG L P VTD L++ FS G++ +KI K G GFVQF + A
Sbjct: 18 GDAAKA-LYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFLDHRAA 76
Query: 105 EEALHKLNGTVIGKQSVRLSWG-----RNPANKQFRADYGN 140
+ AL LNG V+ Q +R++W R + QF+ G+
Sbjct: 77 DMALQSLNGRVLHGQELRVNWAFQKDQREDSASQFQIFVGD 117
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 98
Q Q E +S IFVG L ++ D+ L + F G A ++ KG GFV F
Sbjct: 100 QKDQREDSASQFQIFVGDLASDINDKLLCEAFQSCG-CADARVMWDHNTGRSKGYGFVSF 158
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
R +AE+AL +++GT++G + +R W ++
Sbjct: 159 KTRADAEQALSQMSGTMLGSRRIRCGWAQH 188
>gi|356553476|ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 482
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WGR +K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSK 305
>gi|356499475|ref|XP_003518565.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 484
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WGR +K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSK 305
>gi|18390760|ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 4;
Short=AtC3H4
gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30 [Arabidopsis thaliana]
gi|332189993|gb|AEE28114.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
Length = 481
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ + ++D+R F +GEI S++I K C FV + +RE AE+A
Sbjct: 220 ESPDDESIKTLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKA 279
Query: 108 LHKL-NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQV 151
+L N VI Q ++L+WGR ++ D NQ G + G +
Sbjct: 280 AQELSNRLVINGQRLKLTWGRPKPDQ----DGANQQGGVAHSGLL 320
>gi|356574477|ref|XP_003555373.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 481
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WGR +K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTSK 305
>gi|357462041|ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 492
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI SVK+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGR 127
N VI ++L WGR
Sbjct: 284 SNKLVIKGLRLKLMWGR 300
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y + ++ NT+++V
Sbjct: 239 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRSELNYDDVYNQTGPDNTSVYV 294
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ N DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 295 GNVNSNANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 354
Query: 121 VRLSWGRNPANKQFRADYGNQ 141
++ SWGR P +A+ NQ
Sbjct: 355 IKCSWGRTPEGHNQQANAYNQ 375
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 164 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 223
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 224 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT 262
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 94 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 152
Query: 113 GTVIGKQSVRLSWGRNP 129
V+ ++ ++++W P
Sbjct: 153 KRVLLEKEMKVNWATEP 169
>gi|356549608|ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 467
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI S+K+ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WGR K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQTTK 305
>gi|449530398|ref|XP_004172182.1| PREDICTED: uncharacterized protein LOC101232188 [Cucumis sativus]
Length = 167
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
IFVGGLD +V+DEDL+Q FS+ G++ SVKIP+GKGCGF+QF NR
Sbjct: 123 IFVGGLDYDVSDEDLKQAFSKLGDVVSVKIPIGKGCGFLQFTNR 166
>gi|297822673|ref|XP_002879219.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
gi|297325058|gb|EFH55478.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
Length = 464
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ V ++D+R F YGEI S++I K C FV + RE AE+A
Sbjct: 220 ESPEDQSIKTLYVGGLNSRVLEQDIRDQFYAYGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 108 LHKL-NGTVIGKQSVRLSWGR 127
+L N V+ Q ++L+WGR
Sbjct: 280 AEELSNRLVVNGQRLKLTWGR 300
>gi|225434698|ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Vitis vinifera]
Length = 474
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WGR A K
Sbjct: 284 SNKLVIKGLRLKLMWGRPQAPK 305
>gi|297745955|emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGGLD VT++DLR F +GEI SV++ + + C FV + R
Sbjct: 214 GEMPSLEPPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTR 273
Query: 102 ENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 132
E AE+A +L N VI ++L WGR A K
Sbjct: 274 EGAEKAAEELSNKLVIKGLRLKLMWGRPQAPK 305
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAA-----TPRKSSGYQQQYSSQGGYASNGAPG----------- 44
+ EM G + R +R+G+A R G + + S+ P
Sbjct: 202 LQEMTGTFLKGRAIRVGSAGHQNQRNRNGPGLENKLKGLNATVSSPKPANISSTNFSQFI 261
Query: 45 ----QGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
Q P S D +NTT+FV L VT+ +L+ F +G + K+P K CGFVQ+
Sbjct: 262 LPTQQLPPLNSFTDRNNTTLFVSSLSHMVTENELKAFFQPFGNVIYAKLPENKQCGFVQY 321
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+R +AE A+ KL G I +++SWGR
Sbjct: 322 VDRASAEMAILKLQGFPIRGSRIKISWGR 350
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIP------VGKGCGFVQFANRENAE 105
S+ ++FVG L PNVT+ DL + F S+ ++ K+ V KG FV+F N+E+ +
Sbjct: 140 SNEISVFVGDLAPNVTESDLFELFISKCPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQ 199
Query: 106 EALHKLNGTVIGKQSVRL 123
AL ++ GT + +++R+
Sbjct: 200 RALQEMTGTFLKGRAIRV 217
>gi|303279645|ref|XP_003059115.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458951|gb|EEH56247.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 419
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S TT+F+GG+D VT+ DL+ F YGEI S++ K CGFV F +R AE+A L
Sbjct: 230 DKSITTLFIGGMDERVTEGDLKDTFYAYGEIKSIRCVHAKNCGFVTFTDRAGAEKAAEAL 289
Query: 112 NG-TVIGKQSVRLSWGR 127
+G VI ++L WG+
Sbjct: 290 SGDLVINNLRLKLMWGK 306
>gi|158828226|gb|ABW81104.1| unknown [Cleome spinosa]
Length = 504
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGL+ + ++D+R F YGEI S++I K C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILPEKACAFVTYTTREGAEKATEEL 283
Query: 112 -NGTVIGKQSVRLSWGR 127
N V+ Q ++L+WGR
Sbjct: 284 CNKLVVNGQRLKLTWGR 300
>gi|353239139|emb|CCA71062.1| hypothetical protein PIIN_04997 [Piriformospora indica DSM 11827]
Length = 393
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSG-------YQQQYSSQGGYASNGAPGQ--GPQSEGDSS 54
M GV C RP+R+ A + + + Q S N Q + D
Sbjct: 105 MQGVLCLGRPIRLSRAHAKDRARDKPELVLFANQRSRDERQRDNIVIDQFNAQWASVDPK 164
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NT +FVGG+ P V ++L F+ G I +V GKGC F+ FA + +A A+ +L+G
Sbjct: 165 NTKVFVGGISPRVLLQELVNRFAAMGVITNVNF--GKGCAFISFARKHDAALAIERLDGM 222
Query: 115 VIGKQSVRLSWGRN 128
++ +S+R++W R+
Sbjct: 223 IMDGKSLRVTWSRS 236
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 66 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 114
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
P TD DLR FS YG+IA V++ + FV++ +E A +A+ ++NG + VR
Sbjct: 115 SPQTTDVDLRDSFSTYGDIAEVRVFKTQRYAFVRYEKKECATKAIMEMNGKELAGNQVRC 174
Query: 124 SWGRNPA 130
SWGR A
Sbjct: 175 SWGRTQA 181
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
+FVG L +V++E L+ F ++GE++ K+ KG GFV F N++NAE A+ +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 112 NGTVIGKQSVRLSWG 126
NG IGK++VR +W
Sbjct: 67 NGKWIGKRAVRTNWA 81
>gi|221128187|ref|XP_002162583.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Hydra
magnipapillata]
Length = 470
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S TT++VGGLD + ++DLR F QYGEI SV + K CGF+ + +R+ AE A
Sbjct: 224 ESPSDKSITTLYVGGLDERIKEDDLRNFFYQYGEIRSVVVASNKSCGFICYTSRQAAEMA 283
Query: 108 LHK-LNGTVIGKQSVRLSWGRN 128
+ N +I + +++ WGR+
Sbjct: 284 AERSFNKVIIKGKRLKVLWGRS 305
>gi|242008705|ref|XP_002425142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508823|gb|EEB12404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 849
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T I++G L+P +T++ L + F +YG +AS+KI GK CGFV F NR
Sbjct: 178 GDPNTTNIYLGNLNPKITEQQLMELFGRYGPLASIKIMWPRTDEEKARGKNCGFVAFMNR 237
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++ E A+ LNG + + ++L WG+
Sbjct: 238 KDGERAMRNLNGKDVMQYEMKLGWGK 263
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y ++ NT+++V
Sbjct: 220 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRTELNYDDVYNQTGPDNTSVYV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 276 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 335
Query: 121 VRLSWGRNPANKQFRADYGNQ 141
++ SWGR P +A+ NQ
Sbjct: 336 IKCSWGRTPEGHNQQANAYNQ 356
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 205 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT 243
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 75 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 113 GTVIGKQSVRLSWGRNP 129
V+ ++ ++++W P
Sbjct: 134 KRVLLEKEMKVNWATEP 150
>gi|195382900|ref|XP_002050166.1| GJ21992 [Drosophila virilis]
gi|194144963|gb|EDW61359.1| GJ21992 [Drosophila virilis]
Length = 910
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 14 MRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLR 73
M + +A + + Q S ASN G GD + T +++G L+P ++++ L
Sbjct: 150 MAVASAPVSQQQKPEPQAPSTSQQASNARDAGGSFDTGDPNTTNLYLGNLNPKISEQQLM 209
Query: 74 QPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+ F +YG +AS+KI G+ CGFV + +R++AE AL LNG I +RL
Sbjct: 210 EIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLG 269
Query: 125 WGR 127
WG+
Sbjct: 270 WGK 272
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y ++ NT+++V
Sbjct: 193 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRTELNYDDVYNQTGPDNTSVYV 248
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 249 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 308
Query: 121 VRLSWGRNPANKQFRADYGNQ 141
++ SWGR P +A+ NQ
Sbjct: 309 IKCSWGRTPEGHNQQANAYNQ 329
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 118 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 177
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 178 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT 216
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 48 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 106
Query: 113 GTVIGKQSVRLSWGRNP 129
V+ ++ ++++W P
Sbjct: 107 KRVLLEKEMKVNWATEP 123
>gi|15227567|ref|NP_180518.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
gi|75339110|sp|Q9ZW36.1|C3H25_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=AtC3H25
gi|16226863|gb|AAL16284.1|AF428354_1 At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|3980378|gb|AAC95181.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|27363236|gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|330253181|gb|AEC08275.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
Length = 483
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+S D S T++VGGL+ V ++D+R F +GEI S++I K C FV + RE AE+A
Sbjct: 220 ESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKA 279
Query: 108 LHKL-NGTVIGKQSVRLSWGR 127
+L N V+ Q ++L+WGR
Sbjct: 280 AEELSNRLVVNGQRLKLTWGR 300
>gi|115471551|ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 49;
Short=OsC3H49
gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|222636833|gb|EEE66965.1| hypothetical protein OsJ_23846 [Oryza sativa Japonica Group]
Length = 486
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T+++GGLD VT++DLR F +GEI ++++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYG 148
N VI ++L WG+ A K + G Q A+ G
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPKPEEDEAGRQGHVAHGG 321
>gi|47086019|ref|NP_998379.1| pre-mRNA-splicing factor RBM22 [Danio rerio]
gi|326677871|ref|XP_003200934.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Danio rerio]
gi|82237380|sp|Q6NZZ9.1|RBM22_DANRE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|41388933|gb|AAH65892.1| RNA binding motif protein 22 [Danio rerio]
gi|49619055|gb|AAT68112.1| FLJ10290-like [Danio rerio]
Length = 425
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLNVKWGRSQAAR 309
>gi|133711805|gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGG+D +T++DLR F +GEI S+K+ V +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTR 273
Query: 102 ENAEEALHKL-NGTVIGKQSVRLSWGR 127
E A +A +L N VI ++L WGR
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGR 300
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK +G + G Y + ++ NT+++V
Sbjct: 220 IEQMNGQWLGRRTIRTNWAT-RKPTGTG---AGDGQYGRSELNYDDVYNQTGPDNTSVYV 275
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G ++ + DEDLR F ++G I V+I +G FV+F +++A A+ K+NG + Q+
Sbjct: 276 GNVNSSANDEDLRAAFDKFGRILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQN 335
Query: 121 VRLSWGRNP 129
++ SWGR P
Sbjct: 336 IKCSWGRTP 344
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKG 92
N A G Q++ D+S + +FVG L P V ++ L+ F+ +GE++ K+ KG
Sbjct: 145 NWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKG 204
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GFV + RE AE A+ ++NG +G++++R +W R P
Sbjct: 205 YGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPT 243
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP++T++ + F Q G + K+ + G FV+FA+ A +AL +N
Sbjct: 75 TVYVGNLDPSITEDFITTLFGQIGAVTKTKV-IFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 113 GTVIGKQSVRLSWGRNP 129
V+ ++ ++++W P
Sbjct: 134 KRVLLEKEMKVNWATEP 150
>gi|157422918|gb|AAI53464.1| RNA binding motif protein 22 [Danio rerio]
Length = 425
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLNVKWGRSQAAR 309
>gi|326677860|ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-like, partial [Danio
rerio]
Length = 407
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD +LR F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 210 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 269
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N +I + + + WGR+ A +
Sbjct: 270 FNKLIINGRRLNVKWGRSQAAR 291
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + S R +R AT + Q + + Q Y + +NTT+++GG+
Sbjct: 163 MNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVC-------NSSSYTNTTVYIGGV 215
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+T+ +R+ FS YG I V+I KG F++F E+A A+ +NG+ I V+
Sbjct: 216 TTGLTEGKMRETFSHYGHIQEVRIFPDKGYAFIRFMTHESAAHAIVSVNGSQINGHMVKC 275
Query: 124 SWGRNPANKQFRA 136
SWG+ ++ ++A
Sbjct: 276 SWGKESSDPLYQA 288
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 52 DSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENA 104
D+SN +FVG L V DL+ F+ +G+I+ ++ KG GFV F N+ +A
Sbjct: 97 DTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDA 156
Query: 105 EEALHKLNGTVIGKQSVRLSWG-RNP 129
E A+ +NG + +++R +W R P
Sbjct: 157 ENAIQGMNGQWLSGRAIRTNWATRKP 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENA 104
+ D+ T++VG LD VT+ + Q F Q G S K+ G C FV+F +A
Sbjct: 8 DDDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYC-FVEFVEHSHA 66
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG +I + V+++W P++ +
Sbjct: 67 AAALQTMNGRMILGKEVKVNWATTPSSMK 95
>gi|302800509|ref|XP_002982012.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
gi|300150454|gb|EFJ17105.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
Length = 398
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 11/119 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 112 -NGTVIGKQSVRLSWGRNPANKQ-------FRADYGNQWSGAYYGGQVYDGYGYAIPPP 162
+ V+ ++L WG+ A K + + N+ GA + DG Y +PPP
Sbjct: 280 AHKLVVNGVRLKLMWGKPQAAKSDLSSGGGAQEEQSNEDGGA---AEQDDGVAYYLPPP 335
>gi|449453956|ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
Length = 517
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD V+++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WGR A K
Sbjct: 284 SNKLVIRGLRLKLMWGRPQAPK 305
>gi|390333471|ref|XP_794306.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Strongylocentrotus purpuratus]
Length = 1300
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
+ +P +G+A+ + ++YS G GD + T IF+G ++P + +
Sbjct: 229 TPQPTSVGSASDIRLPAGIEEYS------------YGSHDYGDPNTTNIFLGSINPKMNE 276
Query: 70 EDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
E L + F QYG +ASVKI + CGFV F NR +AE A+ LNG I
Sbjct: 277 EMLCKEFVQYGPLASVKIMWPRTDAERQRNRNCGFVAFMNRRDAERAMRALNGKEIMNYE 336
Query: 121 VRLSWGR 127
++L WG+
Sbjct: 337 MKLGWGK 343
>gi|374256067|gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD +T++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARITEQDLRDHFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGR 127
N VI ++L WG+
Sbjct: 284 ANKLVIKGLRLKLMWGK 300
>gi|401399032|ref|XP_003880458.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
gi|325114868|emb|CBZ50424.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
Length = 400
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQYAFLCYAERSSAEEAVKQ 287
Query: 111 LNGTVIGK-QSVRLSWGRNPANKQFRAD 137
L+ ++ K +R++W + P++K+ + D
Sbjct: 288 LHSNLVIKGVRLRVAWAK-PSDKRKKPD 314
>gi|357125138|ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Brachypodium distachyon]
Length = 488
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T+++GGLD VT++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLDNRVTEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
N VI ++L WG+ A + + G Q
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPRADDDEAGRQ 314
>gi|194383074|dbj|BAG59093.1| unnamed protein product [Homo sapiens]
Length = 412
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|145347969|ref|XP_001418431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578660|gb|ABO96724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDP-NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
P Q D+S TT+FVGG+DP VT++D+ F QYGEI +++ K C F+ FA R
Sbjct: 221 PSQKLTPPEDASITTLFVGGVDPEKVTEDDINSRFYQYGEIKGIRVIGTKKCAFITFATR 280
Query: 102 ENAEEALHK--LNGTVIGKQSVRLSWGRNPANK 132
E AE+A +N + G++ RL WG++ A K
Sbjct: 281 EGAEKAAEDAAINLEINGER-CRLQWGKSAAKK 312
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S+ Y Q+ GD NT+++V
Sbjct: 189 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSN---YNEKSYDEVYNQTSGD--NTSVYV 241
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + N+T++++RQ F+ YG I+ V+I +G FV+F N+ A +A+ ++N +G Q
Sbjct: 242 GNI-ANLTEDEIRQAFASYGRISEVRIFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQM 300
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 301 VRCSWGK 307
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQ 141
+ RE AE A+ ++NG +G++++R +W R P +++ ++Y +
Sbjct: 178 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYNEK 223
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP+V+++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 43 TLYVGNLDPSVSEDFIATLFNQIGSVTKTKV-IHDGANDPYAFVEFSDHGQASQALQTMN 101
Query: 113 GTVIGKQSVRLSWGRNPANKQFRAD 137
++ + ++++W P + + D
Sbjct: 102 KRLLHDREMKVNWAVEPGQQPSKID 126
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQS------EGDSS 54
+ MNG + R +R AT R +S Q Q G N P P + + +
Sbjct: 106 INAMNGQWLGGRVIRTNWATRRPASNANNQ---QEGSQGNSTPKYTPLTFDEVYNQASPT 162
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GGL +++E +++ FS YG I +++ KG FV+FA +E+A A+ ++ T
Sbjct: 163 NCTVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKDKGYAFVRFATKESATHAIVAVHNT 222
Query: 115 VIGKQSVRLSWGR---NPANKQFR 135
+ Q V+ SWG+ +P N+Q +
Sbjct: 223 DVNGQIVKCSWGKESSDPNNQQVQ 246
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
IFVG L +V + LR+ F+ +GEI+ ++ KG GFV F +++AE A++ +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 112 NGTVIGKQSVRLSWG-RNPAN 131
NG +G + +R +W R PA+
Sbjct: 110 NGQWLGGRVIRTNWATRRPAS 130
>gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 102 ENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 132
E A +A +L N VI ++L WGR A K
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQAPK 305
>gi|348535548|ref|XP_003455262.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oreochromis
niloticus]
Length = 427
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL VTD DL+ F Q+GEI ++ I + C F+QFA R++AE A K
Sbjct: 228 DKSITTLYIGGLGDTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLTVKWGRSQAAR 309
>gi|449472546|ref|XP_004153627.1| PREDICTED: polyadenylate-binding protein RBP47C'-like, partial
[Cucumis sativus]
Length = 81
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWS--GAYYGGQVYDGYGYAI 159
+NAE+A+ LNGTVIGKQ+VRLSWGR+ NKQ+R D NQW+ G Y++
Sbjct: 1 KNAEDAIQGLNGTVIGKQTVRLSWGRSTGNKQWRGDSNNQWNGGRYGGQSYGGYGGYYSV 60
Query: 160 PPPNDPSMYAAAAAA 174
P DP+M+ AAAA
Sbjct: 61 PQHQDPNMHPTAAAA 75
>gi|90078618|dbj|BAE88989.1| unnamed protein product [Macaca fascicularis]
Length = 177
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 6 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 65
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 66 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 120
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + + + ++ Y Q+ GD NT+++V
Sbjct: 189 IEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDE-----IYNQTSGD--NTSVYV 241
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + N+++ED+RQ F+ YG I+ V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 242 GNI-ANLSEEDIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQL 300
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 301 VRCSWGK 307
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 118 PGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQVYD 153
+ RE AE A+ ++NG +G++++R +W R P G+Q +Y + YD
Sbjct: 178 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---------GDQEKPVHYNEKSYD 226
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP V+++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 43 TLYVGNLDPTVSEDFVATLFNQIGSVTKTKV-IFDGANDPYAFVEFSDHAQASQALQTMN 101
Query: 113 GTVIGKQSVRLSWGRNP 129
++ + ++++W P
Sbjct: 102 KRLLLDREMKVNWAVEP 118
>gi|384249712|gb|EIE23193.1| hypothetical protein COCSUDRAFT_23819 [Coccomyxa subellipsoidea
C-169]
Length = 464
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D T++VGGL P V D+DLR F YGEI+S+KI + C FV +A R AE A +L
Sbjct: 214 DREIKTLYVGGLAPEVEDQDLRDHFYPYGEISSIKILSARHCAFVTYATRPAAERAAQEL 273
Query: 112 NGTVIGK-QSVRLSWGR 127
+I + Q +L WG+
Sbjct: 274 QHKLIVRGQRAKLMWGK 290
>gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 487
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 44 GQGPQSE--GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANR 101
G+ P E D S T++VGG+D ++++DLR F +GEI S+K+ + +GC FV + R
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273
Query: 102 ENAEEALHKL-NGTVIGKQSVRLSWGRNPANK 132
E A +A +L N VI ++L WGR A K
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQAPK 305
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 279 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 338
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 339 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 393
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 156 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 215
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 216 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 252
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLNGT 114
+VG L +VT+ + Q FSQ G S K+ FV+F +A AL +NG
Sbjct: 87 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 146
Query: 115 VIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 147 KILGKEVKVNWATTPSSQK 165
>gi|431899775|gb|ELK07722.1| U2-associated protein SR140 [Pteropus alecto]
Length = 1041
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 254 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 311
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 312 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 366
>gi|281342682|gb|EFB18266.1| hypothetical protein PANDA_005047 [Ailuropoda melanoleuca]
Length = 954
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 212 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 269
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 270 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 324
>gi|348581626|ref|XP_003476578.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cavia porcellus]
Length = 937
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 150 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 207
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 208 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 262
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG R +R A+ RK + ++ ++ + + + + NT+++VG +
Sbjct: 195 MNGQLIGRRQIRTNWAS-RKPASAEEAHTKEQTFDEVF-------NATRADNTSVYVGNV 246
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+ T+EDLR+ F+ G I+ V+I +G FV++A +E A A+ ++NG I Q+++
Sbjct: 247 HSSTTEEDLREAFASIGAISEVRIFKQQGYAFVRYATKEAATRAIMQMNGKEINGQNIKC 306
Query: 124 SWGRNP 129
SWGR P
Sbjct: 307 SWGRTP 312
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L + + L+ F+ YGEI+ K+ KG GFV F ++E+AE+A+ +
Sbjct: 136 VFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSFPSKESAEKAIAGM 195
Query: 112 NGTVIGKQSVRLSWG-RNPANKQ 133
NG +IG++ +R +W R PA+ +
Sbjct: 196 NGQLIGRRQIRTNWASRKPASAE 218
>gi|363737140|ref|XP_422593.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Gallus gallus]
Length = 1020
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 235 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 292
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 293 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 347
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 214 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 273
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 274 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 328
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 109 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 168
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 169 GGQWLGGRQIRTNWATRKP 187
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|410913889|ref|XP_003970421.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Takifugu rubripes]
Length = 426
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++GGL NVTD DL+ F Q+GEI ++ I + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYIGGLGDNVTDGDLKNFFYQFGEIRTITIVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N +I + + + WGR+ A +
Sbjct: 288 FNKLIINGRRLTVKWGRSQAAR 309
>gi|293349374|ref|XP_002727165.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Rattus norvegicus]
gi|293361281|ref|XP_002730000.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Rattus norvegicus]
Length = 985
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 310
>gi|171460908|ref|NP_080752.2| U2 snRNP-associated SURP motif-containing protein isoform 2 [Mus
musculus]
Length = 985
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 310
>gi|317419983|emb|CBN82019.1| U2-associated protein SR140 [Dicentrarchus labrax]
Length = 965
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 193 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 252
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 253 AFMNRRDAERALKNLNGKMIMNFEMKLGWGK 283
>gi|405969462|gb|EKC34433.1| hypothetical protein CGI_10025795 [Crassostrea gigas]
Length = 2718
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
GP D + T I+VG ++P +T+ +L + F ++G +ASVKI G+ CGFV
Sbjct: 1191 GPYDPVDETTTNIYVGNINPKMTEPELCEIFGRFGPLASVKIMWPRTDEERSRGRNCGFV 1250
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR++ E AL+ L G I + ++L WG+
Sbjct: 1251 AFMNRKDGERALNALKGKDIMQYEMKLGWGK 1281
>gi|148685701|gb|EDL17648.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Mus musculus]
gi|149067623|gb|EDM17175.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_c [Rattus norvegicus]
Length = 252
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 141 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 195
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 195 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 254
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 255 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 309
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 72 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 131
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 132 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 168
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLNGT 114
+VG L +VT+ + Q FSQ G S K+ FV+F +A AL +NG
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 62
Query: 115 VIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 63 KILGKEVKVNWATTPSSQK 81
>gi|417397890|gb|JAA45978.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily [Desmodus rotundus]
Length = 253
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 141 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 195
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 215 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 274
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 275 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 329
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 105 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 164
Query: 107 ALHKLNGTVIGKQSVRLSWG-RNP 129
A+ + G +G + +R +W R P
Sbjct: 165 AIVHMGGQWLGGRQIRTNWATRKP 188
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|71297004|gb|AAH30025.1| TIAL1 protein [Homo sapiens]
Length = 252
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 81 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 140
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 141 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 195
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 333 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 392
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 393 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 447
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 210 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 269
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 270 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 306
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFAN 100
Q P + ++VG L +VT+ + Q FSQ G S K+ FV+F
Sbjct: 127 QAPATFEVQKGRLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYE 186
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
+A AL +NG I + V+++W P++++
Sbjct: 187 HRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 219
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 242 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 296
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 155
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 242 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 296
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 155
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 281 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 335
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 194
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PVGKGCG------- 94
E D T++VG L +VT+ + Q FSQ G S K+ V G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 95 ------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 107
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 324
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 183
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 324
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 183
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
S+NTTI+VGG+ +T++ L+ F Q+GEI ++I KG F++F + A +A+ ++
Sbjct: 135 STNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFIRFDSHVAATQAIVTMH 194
Query: 113 GTVIGKQSVRLSWGRNP--ANKQ 133
G ++G Q+ + SWG+ P NKQ
Sbjct: 195 GKIVGDQACKCSWGKEPTFTNKQ 217
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKL 111
IFVG L P V DE L FS +G I KI KG GFV +A R+ AE A+ +
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 112 NGTVIGKQSVRLSWG--RNPANK 132
NG +IG +++R +W ++PA++
Sbjct: 95 NGQIIGTRAIRTNWAVRKDPADQ 117
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 222 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 281
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 282 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 336
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 117 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 176
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 177 GGQWLGGRQIRTNWATRKP 195
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PVGKGCG------- 94
E D T++VG L +VT+ + Q FSQ G S K+ V G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 95 ------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 107
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 205 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 264
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 265 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 319
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 160 GGQWLGGRQIRTNWATRKP 178
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 225 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 279
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 138
>gi|123391676|ref|XP_001300116.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121881103|gb|EAX87186.1| hypothetical protein TVAG_383730 [Trichomonas vaginalis G3]
Length = 180
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENA 104
G+ S T +FVG D DLR F ++G++ + KI KGCG VQFAN ++A
Sbjct: 2 GEESETCLFVGNYPLEDQDIDLRVKFMRFGKVIAAKIFTRKGSFKSKGCGIVQFANHDDA 61
Query: 105 EEALHKLNGTVIGKQSVRLSW-GRNPANKQFRA 136
++A+ +LNGTV Q++R+ W G+ KQ +
Sbjct: 62 QKAIDELNGTVYKGQTIRVKWGGKEQTEKQLQV 94
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 225 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 279
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 138
>gi|449509637|ref|XP_002195693.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Taeniopygia guttata]
Length = 961
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 173 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 230
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 231 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 285
>gi|449278574|gb|EMC86385.1| U2-associated protein SR140 [Columba livia]
Length = 965
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 177 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 234
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 235 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 289
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 257 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 316
Query: 115 VIGKQSVRLSWGRNP--ANKQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 317 AIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 371
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 134 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 193
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 194 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 230
>gi|355721758|gb|AES07367.1| U2-associated SR140 protein [Mustela putorius furo]
Length = 1008
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 258 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 315
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 316 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 370
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 177
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 177
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 281 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 335
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 194
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PVGKGCG------- 94
E D T++VG L +VT+ + Q FSQ G S K+ V G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 95 ------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 107
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 98 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 157
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 158 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 212
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 67 VTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
+T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ + G +G +
Sbjct: 2 ITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ 61
Query: 121 VRLSWG-RNP 129
+R +W R P
Sbjct: 62 IRTNWATRKP 71
>gi|126338260|ref|XP_001372201.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein
[Monodelphis domestica]
Length = 1034
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 246 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 303
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 304 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 358
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 177
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|432115353|gb|ELK36770.1| Nucleolysin TIAR [Myotis davidii]
Length = 284
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 154 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 213
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 214 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 268
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EMNG R +R A RK G ++ + + + A +NT+++V
Sbjct: 164 IEEMNGQMIGRRQIRTNWAV-RKFDGGEENVTYDNIFNATHA-----------ANTSVYV 211
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ P TDE+L Q FS + V++ +G FV++ N++ A A+ +NG VI Q
Sbjct: 212 GGISPITTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMNGKVINGQK 271
Query: 121 VRLSWGR 127
+R SW R
Sbjct: 272 IRCSWSR 278
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 27/101 (26%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASV-----KIPV------------------ 89
S N +FVG L V + L+ F +GEI+SV +P+
Sbjct: 82 SKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAKVIRDP 141
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 126
KG GFV F +ENA++A+ ++NG +IG++ +R +W
Sbjct: 142 QTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWA 182
>gi|198461072|ref|XP_001361904.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
gi|198137226|gb|EAL26483.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
Length = 956
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------P 88
A++ A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 195 AASNAREVGSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKA 254
Query: 89 VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
G+ CGFV + +R +AE AL LNG I +RL WG+
Sbjct: 255 RGRNCGFVAYMSRRDAERALRTLNGRYIMGYEMRLGWGK 293
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 318
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ + E A+ + G +G + +R +W R P
Sbjct: 141 GFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKP 177
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E S N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSSQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+ NG +I +
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGST 296
Query: 121 VRLSWGR 127
+R SWGR
Sbjct: 297 LRCSWGR 303
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 108
N IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 109 HKLNGTVIGKQSVRLSW 125
+NG + ++++++W
Sbjct: 188 QMMNGEKLEGRNIKVNW 204
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
++++ ++ V G+ +V + L + FS G + S KI V G GFV+F + A
Sbjct: 39 NANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHAGYGFVEFVDSTTARF 98
Query: 107 ALHKLNGTVIGKQSVRLSW 125
A ++G V+ + ++++W
Sbjct: 99 AKDNMDGRVVYGRELKVNW 117
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E S N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSSQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+ NG +I +
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGST 296
Query: 121 VRLSWGR 127
+R SWGR
Sbjct: 297 LRCSWGR 303
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEAL 108
N IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+
Sbjct: 128 NYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAM 187
Query: 109 HKLNGTVIGKQSVRLSW 125
+NG + ++++++W
Sbjct: 188 QMMNGEKLEGRNIKVNW 204
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 43 PGQGPQSEGDSS------NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK----- 91
P Q DSS + ++ V G+ +V + L + FS G + S KI K
Sbjct: 24 PQQNSTETTDSSLPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGVHA 83
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
G GFV+F + A A ++G V+ + ++++W
Sbjct: 84 GYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNW 117
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 324
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 183
>gi|348503420|ref|XP_003439262.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Oreochromis niloticus]
Length = 972
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 200 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 259
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 260 AFMNRRDAERALKNLNGKMIMNFEMKLGWGK 290
>gi|326925891|ref|XP_003209141.1| PREDICTED: u2-associated protein SR140-like [Meleagris gallopavo]
Length = 1036
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 248 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 305
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 306 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 360
>gi|320166721|gb|EFW43620.1| Rbm22 protein [Capsaspora owczarzaki ATCC 30864]
Length = 409
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D S TT++VG LD +++++DLR F Q+GEI S+ I C FV F R AE A +
Sbjct: 270 ADKSITTLYVGNLDDSISEDDLRDYFYQFGEIRSITISRKAACAFVAFTTRLFAEAAAER 329
Query: 111 -LNGTVIGKQSVRLSWGRNPANK 132
N +I + +++ WG++ AN+
Sbjct: 330 SYNKAIIHDRKLKIMWGKSAANQ 352
>gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 40;
Short=OsC3H40
gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|125596196|gb|EAZ35976.1| hypothetical protein OsJ_20278 [Oryza sativa Japonica Group]
gi|215767752|dbj|BAG99980.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV + RE AE+A +L
Sbjct: 224 DESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYG 148
N VI ++L WG+ A K + G Q A+ G
Sbjct: 284 ANKLVIKGIRLKLMWGKPQAPKPEDDEAGRQGHVAHGG 321
>gi|410355679|gb|JAA44443.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1033
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 246 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 303
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 304 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 358
>gi|395832941|ref|XP_003789509.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Otolemur garnettii]
Length = 1027
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 240 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 297
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 298 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 352
>gi|351694957|gb|EHA97875.1| U2-associated protein SR140 [Heterocephalus glaber]
Length = 1029
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|119599363|gb|EAW78957.1| hCG27481, isoform CRA_c [Homo sapiens]
Length = 1029
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|62654101|ref|XP_236501.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
gi|109485106|ref|XP_001065014.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Rattus norvegicus]
Length = 1029
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 335 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 394
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 395 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 449
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 212 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 271
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 272 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 308
>gi|171460910|ref|NP_001108449.1| U2 snRNP-associated SURP motif-containing protein isoform 1 [Mus
musculus]
gi|341942111|sp|Q6NV83.3|SR140_MOUSE RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
Length = 1029
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|47223423|emb|CAG04284.1| unnamed protein product [Tetraodon nigroviridis]
Length = 964
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 185 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 244
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 245 AFMNRRDAERALKHLNGKMIMNFEMKLGWGK 275
>gi|354466181|ref|XP_003495553.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Cricetulus griseus]
Length = 919
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|335299677|ref|XP_003358644.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Sus
scrofa]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 20/129 (15%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
+ G R +R+ +TP+ +Q + AP P TT+F+G L
Sbjct: 243 LTGTELDGREIRVDVSTPKPPRDGNRQGRKE-------APQSAP-------TTTLFLGNL 288
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGTVIG 117
NVT++++R+ FSQYG++ SV+ P KG G+V++ + E A++A+ LNG I
Sbjct: 289 SFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEIA 348
Query: 118 KQSVRLSWG 126
+S+RL +
Sbjct: 349 GRSLRLDYA 357
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFV 96
P + P++E + N+T+FVG L NV +E L F+ G + S +I KG G+V
Sbjct: 171 PTKKPKTE-EPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRL 123
F + +A A L GT + + +R+
Sbjct: 230 TFES-ADALTAAMALTGTELDGREIRV 255
>gi|296227904|ref|XP_002759567.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Callithrix jacchus]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|122937227|ref|NP_001073884.1| U2 snRNP-associated SURP motif-containing protein [Homo sapiens]
gi|301762984|ref|XP_002916912.1| PREDICTED: u2-associated protein SR140-like [Ailuropoda
melanoleuca]
gi|397512450|ref|XP_003826558.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
paniscus]
gi|402861319|ref|XP_003895045.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Papio
anubis]
gi|403278804|ref|XP_003930975.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Saimiri boliviensis boliviensis]
gi|147668553|sp|O15042.2|SR140_HUMAN RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|168267304|dbj|BAG09708.1| U2-associated protein SR140 [synthetic construct]
gi|387273401|gb|AFJ70195.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|410227838|gb|JAA11138.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1034
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 247 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 304
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 305 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 359
>gi|432097247|gb|ELK27586.1| RNA binding protein fox-1 like protein 2, partial [Myotis davidii]
Length = 367
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G P Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 75 TTEGGAQTDGQPSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 134
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 135 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 194
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 195 KLSPVVGAVYGPELY 209
>gi|291399919|ref|XP_002716620.1| PREDICTED: U2-associated SR140 protein [Oryctolagus cuniculus]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|432928337|ref|XP_004081149.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Oryzias latipes]
Length = 970
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 200 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 259
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 260 AFMNRRDAERALKHLNGKMIMNFEMKLGWGK 290
>gi|2224605|dbj|BAA20790.1| KIAA0332 [Homo sapiens]
gi|23336900|tpg|DAA00075.1| TPA_exp: U2-associated SR140 protein [Homo sapiens]
Length = 1028
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 241 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 298
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 299 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|410355677|gb|JAA44442.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1028
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 241 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 298
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 299 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|345789304|ref|XP_534297.3| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Canis
lupus familiaris]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|332232395|ref|XP_003265391.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Nomascus leucogenys]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|149729916|ref|XP_001493107.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein [Equus
caballus]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|114589671|ref|XP_516796.2| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Pan
troglodytes]
gi|410227836|gb|JAA11137.1| U2 snRNP-associated SURP domain containing [Pan troglodytes]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 306 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 365
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +PP
Sbjct: 366 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 420
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 183 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 242
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 243 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 279
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLNGT 114
+VG L +VT+ + Q FSQ G S K+ FV+F +A AL +NG
Sbjct: 114 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 173
Query: 115 VIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 174 KILGKEVKVNWATTPSSQK 192
>gi|426342412|ref|XP_004037839.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein [Gorilla gorilla gorilla]
Length = 1037
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|426218190|ref|XP_004003332.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Ovis
aries]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|76608208|ref|XP_877060.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
isoform 6 [Bos taurus]
gi|297471247|ref|XP_002685082.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Bos
taurus]
gi|296491010|tpg|DAA33108.1| TPA: U2-associated SR140 protein [Bos taurus]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|417405635|gb|JAA49525.1| Putative splicing regulator [Desmodus rotundus]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|344288968|ref|XP_003416218.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Loxodonta africana]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|297286711|ref|XP_001107114.2| PREDICTED: u2-associated protein SR140-like [Macaca mulatta]
Length = 1029
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|194881758|ref|XP_001974988.1| GG22076 [Drosophila erecta]
gi|190658175|gb|EDV55388.1| GG22076 [Drosophila erecta]
Length = 960
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVG 90
N + G GD + T +++G L+P ++++ L + F +YG +AS+KI G
Sbjct: 199 NSSKESGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRG 258
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ CGFV + +R++AE AL LNG I +RL WG+
Sbjct: 259 RNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWGK 295
>gi|440911806|gb|ELR61439.1| U2-associated protein SR140 [Bos grunniens mutus]
Length = 1035
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 354
>gi|432119575|gb|ELK38536.1| U2 snRNP-associated SURP motif-containing protein [Myotis davidii]
Length = 1052
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 264 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 321
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 322 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 376
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 204 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 263
Query: 115 VIGKQSVRLSWGRNPANK--------QFRADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + +F DY QWS Y Q Y Y G+ +PP
Sbjct: 264 TIEGHVVKCYWGKESPDMTKNFQQVIRFFVDYSQWGQWSQVYGNPQQYGQYMANGWQVPP 323
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 141 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 177
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|45946398|gb|AAH68265.1| RIKEN cDNA 2610101N10 gene [Mus musculus]
Length = 985
Score = 69.3 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 198 RRSMDVPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 255
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F +R +AE AL LNG +I ++L WGR
Sbjct: 256 LASVKIMWPRTDEERARERNCGFVAFMSRRDAERALKNLNGKMIMSFEMKLGWGR 310
>gi|110681486|emb|CAL25353.1| ACBF-like dna binding protein [Platanus x acerifolia]
Length = 216
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGG 36
++EMNG YCS+RPMR+G ATPRKSSGYQQQYSSQGG
Sbjct: 181 ISEMNGAYCSNRPMRVGVATPRKSSGYQQQYSSQGG 216
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK------GCGFVQFANRENAEEAL 108
N TI+VG L + L F+ GE+ S+K+ K G GFV+F +RE AE+ L
Sbjct: 28 NKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEKVL 87
Query: 109 HKLNGTVI--GKQSVRLSW 125
NGT + +Q RL+W
Sbjct: 88 QNYNGTAMPNTEQPFRLNW 106
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPF-SQYGEIASVKIPV------GKGCGFVQFANRENAEE 106
S+ +IFVG L +VTD L++ F S+Y + K+ + KG GFV+F +
Sbjct: 120 SDHSIFVGDLSSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSR 179
Query: 107 ALHKLNGTVIGKQSVRL 123
A+ ++NG + +R+
Sbjct: 180 AISEMNGAYCSNRPMRV 196
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK S + S+ G +S + ++ SN T++
Sbjct: 155 IQQMNGQWLGGRQIRTNWAT-RKPSAPK---SNNEGASSKHLSYEEVLNQSSPSNCTVYC 210
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ ++D+ +RQ FS +G+I +++ KG FV+F + E A A+ +NGT I +
Sbjct: 211 GGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHT 270
Query: 121 VRLSWGRNPAN 131
V+ WG+ A+
Sbjct: 271 VKCYWGKETAD 281
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGC 93
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GF+ F N+ +AE A+ ++NG +G + +R +W R P+
Sbjct: 141 GFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPS 178
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A AL +
Sbjct: 10 TLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYC-FVEFYENRHAAAALAAM 68
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
NG I + ++++W P++++
Sbjct: 69 NGRKILGKDMKVNWASTPSSQK 90
>gi|149018881|gb|EDL77522.1| rCG25679, isoform CRA_c [Rattus norvegicus]
Length = 784
Score = 68.9 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 19 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 78
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 79 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 109
>gi|195170236|ref|XP_002025919.1| GL10142 [Drosophila persimilis]
gi|194110783|gb|EDW32826.1| GL10142 [Drosophila persimilis]
Length = 956
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 203 GSFDTGDPNTTNLYLGNLNPKISEQQLMETFGRYGPLASIKIMWPRSDEEKARGRNCGFV 262
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ +R +AE AL LNG I +RL WG+
Sbjct: 263 AYMSRRDAERALRTLNGRYIMGYEMRLGWGK 293
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT RK S + S+ G +S + ++ SN T++
Sbjct: 155 IQQMNGQWLGGRQIRTNWAT-RKPSAPK---SNNEGASSKHLSYEEVLNQSSPSNCTVYC 210
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ ++D+ +RQ FS +G+I +++ KG FV+F + E A A+ +NGT I +
Sbjct: 211 GGIASGLSDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHT 270
Query: 121 VRLSWGRNPAN 131
V+ WG+ A+
Sbjct: 271 VKCYWGKETAD 281
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P ++ +D+R F+ +G+I+ ++ KG
Sbjct: 81 NWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPA 130
GF+ F N+ +AE A+ ++NG +G + +R +W R P+
Sbjct: 141 GFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPS 178
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A AL +
Sbjct: 10 TLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYC-FVEFYENRHAAAALAAM 68
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
NG I + ++++W P++++
Sbjct: 69 NGRKILGKDMKVNWASTPSSQK 90
>gi|432878644|ref|XP_004073359.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oryzias latipes]
Length = 426
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL NVTD DL+ F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYIGGLGDNVTDGDLKGHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLILNGRRLTVKWGRSQAAR 309
>gi|255558830|ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis]
gi|223540280|gb|EEF41851.1| RNA binding motif protein, putative [Ricinus communis]
Length = 285
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD +T++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 42 DESIKTLYVGGLDARITEQDLRDNFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAEEL 101
Query: 112 -NGTVIGKQSVRLSWGR 127
N VI ++L WGR
Sbjct: 102 SNKLVIKGLRLKLMWGR 118
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 286 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 334
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
TD DLR FS YG+IA V+I + FV++ +E A +A+ ++NG + VR
Sbjct: 335 SQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVRC 394
Query: 124 SWGRNPA 130
SWGR A
Sbjct: 395 SWGRTQA 401
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L +V++E L+ F+++GE++ K+ KG GFV F N++NAE A+ +
Sbjct: 227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286
Query: 112 NGTVIGKQSVRLSWG 126
NG IGK++VR +W
Sbjct: 287 NGKWIGKRAVRTNWA 301
>gi|427798579|gb|JAA64741.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 381
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D+S TT++VG L +T++DLR F QYGEI V + + C FVQF NR +AE A K
Sbjct: 228 DTSITTLYVGNLGDRLTEKDLRDHFYQYGEIRGVTMLARQQCAFVQFTNRVSAELAADKT 287
Query: 111 LNGTVIGKQSVRLSWGR 127
N ++G + + + WGR
Sbjct: 288 FNKLILGGRRLVIKWGR 304
>gi|221504135|gb|EEE29812.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii VEG]
Length = 400
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQ 287
Query: 111 LNGTVIGK-QSVRLSWG 126
L+ ++ K +R++W
Sbjct: 288 LHSNLVIKGVRLRVAWA 304
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 18/125 (14%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 215 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 274
Query: 115 VIGKQSVRLSWGRNPANKQ-------------FRADYGN--QWSGAYYGGQVYDGY---G 156
I V+ WG+ + F+ DY QWS Y Q Y Y G
Sbjct: 275 TIEGHVVKCYWGKESPDMTKNFQQVIQFFIALFKVDYSQWGQWSQVYGNPQQYGQYMANG 334
Query: 157 YAIPP 161
+ +PP
Sbjct: 335 WQVPP 339
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 105 SDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 164
Query: 107 ALHKLNGTVIGKQSVRLSWG-RNP 129
A+ + G +G + +R +W R P
Sbjct: 165 AIVHMGGQWLGGRQIRTNWATRKP 188
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|237840441|ref|XP_002369518.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|211967182|gb|EEB02378.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|221483211|gb|EEE21535.1| lysine-specific histone demethylase, putative [Toxoplasma gondii
GT1]
Length = 400
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D++NTT+FVGGL VT++DLR F +GE+ S+K+ G+ F+ +A R +AEEA+ +
Sbjct: 228 ADTTNTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQ 287
Query: 111 LNGTVIGK-QSVRLSWG 126
L+ ++ K +R++W
Sbjct: 288 LHSNLVIKGVRLRVAWA 304
>gi|170058302|ref|XP_001864863.1| U2-associated SR140 protein [Culex quinquefasciatus]
gi|167877443|gb|EDS40826.1| U2-associated SR140 protein [Culex quinquefasciatus]
Length = 603
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 174 GSFDNGDPNTTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 233
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
+ +R +AE AL LNG + ++L WG++
Sbjct: 234 AYMSRRDAERALRALNGKDVMNYEMKLGWGKS 265
>gi|345325652|ref|XP_003430942.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Ornithorhynchus anatinus]
Length = 1079
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 342 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 399
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 400 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 454
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 18/125 (14%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 205 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 264
Query: 115 VIGKQSVRLSWGRNPANKQ-------------FRADYGN--QWSGAYYGGQVYDGY---G 156
I V+ WG+ + F+ DY QWS Y Q Y Y G
Sbjct: 265 TIEGHVVKCYWGKESPDMTKNFQQVIQFFIALFKVDYSQWGQWSQVYGNPQQYGQYMANG 324
Query: 157 YAIPP 161
+ +PP
Sbjct: 325 WQVPP 329
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE A+ +
Sbjct: 100 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 159
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 160 GGQWLGGRQIRTNWATRKP 178
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQK 90
>gi|302808802|ref|XP_002986095.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
gi|300146243|gb|EFJ12914.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
Length = 366
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 220 DTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 279
Query: 112 -NGTVIGKQSVRLSWGRNPANKQFRADYG---NQWSGAYYGGQVYD-GYGYAIPPP 162
+ V+ ++L WG+ A K + G + S G D G Y +PPP
Sbjct: 280 AHKLVVNGVRLKLMWGKPQAAKSDLSSGGGAQEEQSNEDGGAAEQDGGAAYYLPPP 335
>gi|76163139|gb|AAX30926.2| SJCHGC08802 protein [Schistosoma japonicum]
Length = 171
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA R AE A +
Sbjct: 81 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFATRSAAERAAERT 140
Query: 112 -NGTVIGKQSVRLSWGRNPA 130
+ ++G + ++WG++PA
Sbjct: 141 YDRLILGGHRLTVNWGKSPA 160
>gi|195585268|ref|XP_002082411.1| GD11555 [Drosophila simulans]
gi|194194420|gb|EDX07996.1| GD11555 [Drosophila simulans]
Length = 989
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++AE AL LNG I +RL WG+
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWGK 295
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ + Y Q+ GD NT+++V
Sbjct: 191 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPTH---YNEKSFDEIYNQTSGD--NTSVYV 243
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + N++++++RQ F+ YG I+ V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 244 GNI-ANLSEDEIRQAFASYGRISEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQL 302
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 303 VRCSWGK 309
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ P + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 120 PGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 179
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 133
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 180 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 217
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LDP+V+++ + F+Q G + K+ + G FV+F + A +AL +N
Sbjct: 45 TLYVGNLDPSVSEDLIATLFNQIGSVTKTKV-IFDGANDPYAFVEFLDHSQASQALQTMN 103
Query: 113 GTVIGKQSVRLSWGRNPANKQFRAD 137
++ + ++++W P + + D
Sbjct: 104 KRLLLDREMKVNWAVEPGQQPSKVD 128
>gi|27819958|gb|AAL39666.2| LD23810p, partial [Drosophila melanogaster]
Length = 958
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 211 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 270
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++AE AL LNG I +RL WG+
Sbjct: 271 KDAERALKTLNGRYIMGYEMRLGWGK 296
>gi|19922658|ref|NP_611535.1| CG9346 [Drosophila melanogaster]
gi|7291222|gb|AAF46654.1| CG9346 [Drosophila melanogaster]
gi|220947134|gb|ACL86110.1| CG9346-PA [synthetic construct]
gi|220956694|gb|ACL90890.1| CG9346-PA [synthetic construct]
Length = 957
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++AE AL LNG I +RL WG+
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWGK 295
>gi|195123969|ref|XP_002006474.1| GI21069 [Drosophila mojavensis]
gi|193911542|gb|EDW10409.1| GI21069 [Drosophila mojavensis]
Length = 936
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 184 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 243
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ +R++AE AL LNG I +RL WG+
Sbjct: 244 AYMSRKDAERALRTLNGRYIMGYEMRLGWGK 274
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 253 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 301
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
TD DLR FS YG+IA V++ + FV++ +E A +A+ ++NG + VR
Sbjct: 302 SQQTTDADLRDSFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKEMAGNQVRC 361
Query: 124 SWGRNPA 130
SWGR A
Sbjct: 362 SWGRTQA 368
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
+FVG L +V+++ L+ F +YGE++ K+ KG GFV F N++NAE A+ +
Sbjct: 194 VFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 253
Query: 112 NGTVIGKQSVRLSWG 126
NG IGK++VR +W
Sbjct: 254 NGKWIGKRAVRTNWA 268
>gi|168027976|ref|XP_001766505.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682414|gb|EDQ68833.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HK 110
D S T++VGGL VT+EDL+ F YGEI S+++ + C FV + RE AE+A H
Sbjct: 224 DMSIKTLYVGGLVDRVTEEDLKDQFYGYGEIESIRMVPQRACAFVTYTTREGAEKAADHL 283
Query: 111 LNGTVIGKQSVRLSWGR 127
N VI ++L WGR
Sbjct: 284 ANKLVINGLRLKLMWGR 300
>gi|42571787|ref|NP_973984.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|332194052|gb|AEE32173.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 310
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 41/60 (68%), Gaps = 7/60 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
MTEMNGV CSSR MRIG ATPRK++GYQQ QGGY NG + EGD NTT+ V
Sbjct: 256 MTEMNGVKCSSRAMRIGPATPRKTNGYQQ----QGGYMPNGTLT---RPEGDIMNTTVIV 308
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQ-YGEIASVKIPV------GKGCGFVQFANRE 102
E + + +IFVG L P+V+D L + FS+ Y + + K+ + KG GFV+F +
Sbjct: 191 ENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDEN 250
Query: 103 NAEEALHKLNGTVIGKQSVRL 123
+A+ ++NG +++R+
Sbjct: 251 ERTKAMTEMNGVKCSSRAMRI 271
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS--QYGEIASVKIP------VGKGCGF 95
G Q+ + N TI+VG L + + L F+ EI SVK+ + +G GF
Sbjct: 89 GNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGF 148
Query: 96 VQFANRENAEEALHKLNGTVI--GKQSVRLSWG 126
V+F + + A++ L + NGT + Q RL+W
Sbjct: 149 VEFESHDVADKVLREFNGTTMPNTDQPFRLNWA 181
>gi|330846362|ref|XP_003295005.1| hypothetical protein DICPUDRAFT_51830 [Dictyostelium purpureum]
gi|325074406|gb|EGC28470.1| hypothetical protein DICPUDRAFT_51830 [Dictyostelium purpureum]
Length = 244
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 15/130 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G Y +++P+++ + T ++ + Q S+ +S D +NT I+V
Sbjct: 26 LIEMQGFYINNKPIKVNSPTHKRLNS---QLSTIPDLSS-----------TDPTNTAIYV 71
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
LDP + + L+ F YGEI+ +K+ K FV + RE+AE A LN +G
Sbjct: 72 SQLDPYIDEGVLQTIFGAYGEISFIKMLNNKFSAFVNYVTRESAEAAF-GLNNYAVGNSR 130
Query: 121 VRLSWGRNPA 130
+++ WG+N A
Sbjct: 131 LKIQWGKNIA 140
>gi|149064345|gb|EDM14548.1| RNA binding motif protein 22, isoform CRA_a [Rattus norvegicus]
Length = 377
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + + WGR+ A
Sbjct: 288 FNKLIVNGRRLNVKWGRSQA 307
>gi|119599362|gb|EAW78956.1| hCG27481, isoform CRA_b [Homo sapiens]
Length = 998
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 233 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 292
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 293 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 323
>gi|195455607|ref|XP_002074793.1| GK22959 [Drosophila willistoni]
gi|194170878|gb|EDW85779.1| GK22959 [Drosophila willistoni]
Length = 929
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 210 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 269
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ +R++AE AL LNG + +RL WG+
Sbjct: 270 AYMSRKDAERALRTLNGRYVMGYEMRLGWGK 300
>gi|410909191|ref|XP_003968074.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Takifugu rubripes]
Length = 974
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F +YG +ASVKI + CGFV
Sbjct: 201 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFV 260
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 261 AFMNRRDAERALKHLNGKMIMNFEMKLGWGK 291
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG--QGPQSEGDSSNTTI 58
++ MNG + SR +R+ A + +G + + P + + + NTT+
Sbjct: 164 ISTMNGEWLGSRAIRVNWANQKTQTGSHRLNDLMPTMNAFNGPLSYEAVFQQTPAYNTTV 223
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
++G L P T DL F +G I V++ +G FV+ + ENA A+ +L GT+I
Sbjct: 224 YIGNLTPYTTQADLVPIFQAFGYIIEVRMQADRGFAFVKLDSHENASMAIVQLQGTLIQG 283
Query: 119 QSVRLSWGRN 128
+ ++ SWGR+
Sbjct: 284 RPIKCSWGRD 293
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG + D++N +FVG L P V DE L + FS + I+ ++ +G GF+
Sbjct: 94 QGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLS 153
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWG 126
F + +AE+A+ +NG +G +++R++W
Sbjct: 154 FREKTDAEQAISTMNGEWLGSRAIRVNWA 182
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + SVKI G GFV++ + AE AL
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 111 LNGTVIGKQSVRLSWGRNPANKQ 133
LNG I +R++W NKQ
Sbjct: 77 LNGRKIFDTEIRVNWAYQGNNKQ 99
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 221 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 280
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIPP 161
I V+ WG+ + K F + DY QW Y Q Y Y G+ +PP
Sbjct: 281 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWGQVYGNPQQYGQYMANGWQVPP 335
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 98 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 157
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 158 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 194
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PVGKGCG------- 94
E D T++VG L +VT+ + Q FSQ G S K+ V G
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 95 ------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 107
>gi|253723319|pdb|2YTC|A Chain A, Solution Structure Of Rna Binding Domain In Pre-Mrna-
Splicing Factor Rbm22
Length = 85
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 9 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 68
Query: 111 LNGTVIGKQSVRLSWGR 127
N ++ + + + WGR
Sbjct: 69 FNKLIVNGRRLNVKWGR 85
>gi|71043848|ref|NP_001020847.1| pre-mRNA-splicing factor RBM22 [Rattus norvegicus]
gi|81907895|sp|Q4V7D7.1|RBM22_RAT RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|66910908|gb|AAH97991.1| RNA binding motif protein 22 [Rattus norvegicus]
Length = 420
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI +V + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|387018642|gb|AFJ51439.1| pre-mRNA-splicing factor RBM22-like [Crotalus adamanteus]
Length = 421
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|344244393|gb|EGW00497.1| U2-associated protein SR140 [Cricetulus griseus]
Length = 649
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 15 RIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQ 74
R+ P +S Q+ S YA G GD S T +++G ++P + +E L Q
Sbjct: 139 RLSRFEPPQSDSDGQRRSILDDYAP------GSHDVGDPSTTNLYLGNINPQMNEEMLCQ 192
Query: 75 PFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++G +ASVKI + CGFV F NR +AE AL LNG +I ++L W
Sbjct: 193 EFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGW 252
Query: 126 GR 127
G+
Sbjct: 253 GK 254
>gi|224067689|ref|XP_002198708.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Taeniopygia guttata]
Length = 420
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 284 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 343
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 344 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 397
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 161 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 220
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 221 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 257
>gi|327267007|ref|XP_003218294.1| PREDICTED: u2-associated protein SR140-like [Anolis carolinensis]
Length = 989
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 222 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 281
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 282 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 312
>gi|326928574|ref|XP_003210452.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Meleagris
gallopavo]
Length = 420
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|195486673|ref|XP_002091605.1| GE12157 [Drosophila yakuba]
gi|194177706|gb|EDW91317.1| GE12157 [Drosophila yakuba]
Length = 960
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 205 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 264
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ +R++AE AL LNG I +RL WG+
Sbjct: 265 AYMSRKDAERALRTLNGRYIMGYEMRLGWGK 295
>gi|13623693|gb|AAH06474.1| Unknown (protein for IMAGE:2820942), partial [Homo sapiens]
Length = 1027
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 262 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 321
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 322 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 352
>gi|380811072|gb|AFE77411.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|383416995|gb|AFH31711.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
gi|384946074|gb|AFI36642.1| U2 snRNP-associated SURP motif-containing protein [Macaca mulatta]
Length = 1028
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|209364570|ref|NP_001127512.1| U2 snRNP-associated SURP motif-containing protein [Pongo abelii]
gi|75070608|sp|Q5R7X2.1|SR140_PONAB RecName: Full=U2 snRNP-associated SURP motif-containing protein;
AltName: Full=140 kDa Ser/Arg-rich domain protein;
AltName: Full=U2-associated protein SR140
gi|55730839|emb|CAH92138.1| hypothetical protein [Pongo abelii]
Length = 1028
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|148677878|gb|EDL09825.1| mCG6024, isoform CRA_c [Mus musculus]
Length = 421
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|126341354|ref|XP_001368859.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Monodelphis domestica]
Length = 984
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 21/119 (17%)
Query: 30 QYSSQGGYASNGAPGQ------------GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFS 77
Q S G + S AP Q G GD S T +++G ++P V +E L Q F
Sbjct: 194 QSHSDGQHHSMDAPSQRNISSVPDDYAPGSHDVGDPSTTNLYLGNINPQVNEEMLCQEFG 253
Query: 78 QYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
++G +ASVKI + CGFV F NR +AE AL L+G +I ++L WG+
Sbjct: 254 RFGPLASVKIMWPRTDQERGRKRNCGFVAFMNRIDAERALKNLHGKMIMSFEMKLGWGK 312
>gi|157131270|ref|XP_001655847.1| gar2, putative [Aedes aegypti]
gi|108871595|gb|EAT35820.1| AAEL012045-PA, partial [Aedes aegypti]
Length = 954
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +++++L + F +YG +AS+KI G+ CGFV
Sbjct: 185 GSFDNGDPNTTNLYLGNLNPKISEQELMELFGKYGPLASIKIMWPRSEEERARGRNCGFV 244
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
+ +R +AE AL LNG + ++L WG++
Sbjct: 245 AYMSRRDAERALRALNGKEVMNYLMKLGWGKS 276
>gi|57525003|ref|NP_001006151.1| pre-mRNA-splicing factor RBM22 [Gallus gallus]
gi|82233932|sp|Q5ZM16.1|RBM22_CHICK RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|53127796|emb|CAG31227.1| hypothetical protein RCJMB04_3g16 [Gallus gallus]
Length = 420
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|395528085|ref|XP_003766162.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Sarcophilus harrisii]
Length = 1186
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 398 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 455
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 456 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 510
>gi|195346271|ref|XP_002039689.1| GM15794 [Drosophila sechellia]
gi|194135038|gb|EDW56554.1| GM15794 [Drosophila sechellia]
Length = 957
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV + +R
Sbjct: 210 GDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFVAYMSR 269
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++AE AL LNG I +RL WG+
Sbjct: 270 KDAERALKTLNGRYIMGYEMRLGWGK 295
>gi|4096748|gb|AAC99998.1| ORF; Method: conceptual translation supplied by author [Homo
sapiens]
Length = 367
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 175 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 234
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 235 FNKLIVNGRRLNVKWGRSQAAR 256
>gi|194754789|ref|XP_001959677.1| GF11923 [Drosophila ananassae]
gi|190620975|gb|EDV36499.1| GF11923 [Drosophila ananassae]
Length = 963
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 9/102 (8%)
Query: 35 GGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------- 87
G ++N A G GD + T +++G L+P ++++ L + F +YG +AS+KI
Sbjct: 201 GSKSANNARDSGSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEE 260
Query: 88 --PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
G+ CGFV + +R++AE AL LN I ++L WG+
Sbjct: 261 EKQRGRNCGFVAYMSRKDAERALRALNCRYIMGNKMQLGWGK 302
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
M MNG R +++ T +S +Q S +E N T+++
Sbjct: 187 MQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYDEI----------NNETSIQNCTVYI 236
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + NV +DL+Q ++YG I V++ KG F++F+ E+A A+ NG +I +
Sbjct: 237 GNIPKNVESDDLKQLLAEYGSIEEVRLNKDKGYAFIKFSKHESATSAILMCNGKIINGST 296
Query: 121 VRLSWGR 127
+R SWGR
Sbjct: 297 LRCSWGR 303
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
IFVGGL P V D+ L + F ++G + ++ KG GFV F +E+AE A+ +
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 112 NGTVIGKQSVRLSW 125
NG + ++++++W
Sbjct: 191 NGEKLEGRNIKVNW 204
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 21 PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYG 80
PR YQQ+ Q N P ++++ ++ V G+ +V + L + FS G
Sbjct: 13 PRVPQLYQQRPPQQ-----NPTETTEPPIPINANSKSVHVSGIHESVDEILLGRIFSIVG 67
Query: 81 EIASVKIPVGK-----GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ S KI K G GFV+F + A A ++G V+ + ++++W
Sbjct: 68 HVVSCKIMRDKSGTHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNW 117
>gi|242094866|ref|XP_002437923.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
gi|241916146|gb|EER89290.1| hypothetical protein SORBIDRAFT_10g004840 [Sorghum bicolor]
Length = 491
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
N VI ++L WG+ A K + G Q
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPKPEEDESGRQ 314
>gi|355750335|gb|EHH54673.1| hypothetical protein EGM_15557 [Macaca fascicularis]
Length = 421
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 289 FNKLIVNGRRLNVKWGRSQAAR 310
>gi|327265402|ref|XP_003217497.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Anolis
carolinensis]
Length = 421
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|417400642|gb|JAA47250.1| Putative pre-mrna-splicing factor rbm22 [Desmodus rotundus]
Length = 420
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|357614550|gb|EHJ69142.1| hypothetical protein KGM_18723 [Danaus plexippus]
Length = 877
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
P G GD + T +++G L+P +T++ L + F +YG +AS+KI G+ C
Sbjct: 149 PDVGSYDTGDPNTTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNC 208
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
GFV F +R++ E AL +NG I ++L WG+
Sbjct: 209 GFVAFMSRKDGERALRCINGKEIMNYEMKLGWGK 242
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 285 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 344
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 345 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 398
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 162 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 221
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 222 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 258
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLNGT 114
+VG L +VT+ + Q FSQ G S K+ FV+F +A AL +NG
Sbjct: 93 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 152
Query: 115 VIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 153 KILGKEVKVNWATTPSSQK 171
>gi|355691758|gb|EHH26943.1| hypothetical protein EGK_17030 [Macaca mulatta]
Length = 421
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 289 FNKLIVNGRRLNVKWGRSQAAR 310
>gi|148677877|gb|EDL09824.1| mCG6024, isoform CRA_b [Mus musculus]
Length = 436
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 243 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 302
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 303 FNKLIVNGRRLNVKWGRSQAAR 324
>gi|444723694|gb|ELW64335.1| Pre-mRNA-splicing factor RBM22 [Tupaia chinensis]
Length = 428
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 236 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 295
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 296 FNKLIVNGRRLNVKWGRSQAAR 317
>gi|194384782|dbj|BAG59551.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 179 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 238
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 239 FNKLIVNGRRLNVKWGRSQAAR 260
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 280 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 333
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 193
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PVGKGCG------- 94
E D T++VG L +VT+ + Q FSQ G S K+ V G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 61
Query: 95 ------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 106
>gi|119582116|gb|EAW61712.1| RNA binding motif protein 22, isoform CRA_c [Homo sapiens]
Length = 421
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 229 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 288
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 289 FNKLIVNGRRLNVKWGRSQAAR 310
>gi|12858161|dbj|BAB31220.1| unnamed protein product [Mus musculus]
Length = 420
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|344250874|gb|EGW06978.1| Pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 241
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 93 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 152
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 153 FNKLIVNGRRLNVKWGRSQAAR 174
>gi|197098656|ref|NP_001125624.1| pre-mRNA-splicing factor RBM22 [Pongo abelii]
gi|75070751|sp|Q5RAY5.1|RBM22_PONAB RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|55728671|emb|CAH91075.1| hypothetical protein [Pongo abelii]
Length = 420
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 224 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 283
Query: 115 VIGKQSVRLSWGRNP--ANKQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ K F + DY QWS Y Q Y Y G+ +P
Sbjct: 284 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 337
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 101 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 160
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 161 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 197
>gi|148688989|gb|EDL20936.1| RIKEN cDNA 2610101N10 [Mus musculus]
Length = 1028
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|74195542|dbj|BAE39585.1| unnamed protein product [Mus musculus]
Length = 420
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|8922328|ref|NP_060517.1| pre-mRNA-splicing factor RBM22 [Homo sapiens]
gi|110625591|ref|NP_080052.1| pre-mRNA-splicing factor RBM22 [Mus musculus]
gi|383873093|ref|NP_001244425.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|73954184|ref|XP_546302.2| PREDICTED: pre-mRNA-splicing factor RBM22 [Canis lupus familiaris]
gi|114602891|ref|XP_001167240.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Pan
troglodytes]
gi|291387642|ref|XP_002710359.1| PREDICTED: RNA binding motif protein 22 [Oryctolagus cuniculus]
gi|332235023|ref|XP_003266703.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Nomascus leucogenys]
gi|344265156|ref|XP_003404652.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Loxodonta africana]
gi|348583291|ref|XP_003477406.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cavia porcellus]
gi|397517732|ref|XP_003829060.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Pan paniscus]
gi|402873102|ref|XP_003900425.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Papio anubis]
gi|410949463|ref|XP_003981441.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Felis catus]
gi|426350648|ref|XP_004042882.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Gorilla gorilla gorilla]
gi|74762758|sp|Q9NW64.1|RBM22_HUMAN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22; AltName: Full=Zinc
finger CCCH domain-containing protein 16
gi|75075716|sp|Q4R4J1.1|RBM22_MACFA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|81913160|sp|Q8BHS3.1|RBM22_MOUSE RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|7022226|dbj|BAA91521.1| unnamed protein product [Homo sapiens]
gi|12053361|emb|CAB66867.1| hypothetical protein [Homo sapiens]
gi|13097297|gb|AAH03402.1| RNA binding motif protein 22 [Homo sapiens]
gi|26337089|dbj|BAC32229.1| unnamed protein product [Mus musculus]
gi|51480449|gb|AAH80205.1| RNA binding motif protein 22 [Mus musculus]
gi|60654947|gb|AAX32038.1| RNA binding motif protein 22 [synthetic construct]
gi|67971284|dbj|BAE01984.1| unnamed protein product [Macaca fascicularis]
gi|74151559|dbj|BAE38885.1| unnamed protein product [Mus musculus]
gi|74198886|dbj|BAE30665.1| unnamed protein product [Mus musculus]
gi|74212676|dbj|BAE31073.1| unnamed protein product [Mus musculus]
gi|74214020|dbj|BAE29427.1| unnamed protein product [Mus musculus]
gi|74223191|dbj|BAE40732.1| unnamed protein product [Mus musculus]
gi|117646096|emb|CAL38515.1| hypothetical protein [synthetic construct]
gi|119582115|gb|EAW61711.1| RNA binding motif protein 22, isoform CRA_b [Homo sapiens]
gi|208965472|dbj|BAG72750.1| RNA binding motif protein 22 [synthetic construct]
gi|296485163|tpg|DAA27278.1| TPA: pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|380814544|gb|AFE79146.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|383419867|gb|AFH33147.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|384948134|gb|AFI37672.1| pre-mRNA-splicing factor RBM22 [Macaca mulatta]
gi|410207524|gb|JAA00981.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410255988|gb|JAA15961.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410291244|gb|JAA24222.1| RNA binding motif protein 22 [Pan troglodytes]
gi|410354161|gb|JAA43684.1| RNA binding motif protein 22 [Pan troglodytes]
Length = 420
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|432098820|gb|ELK28315.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 385
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 193 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 252
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 253 FNKLIVNGRRLNVKWGRSQAAR 274
>gi|431918047|gb|ELK17275.1| Pre-mRNA-splicing factor RBM22 [Pteropus alecto]
gi|440904796|gb|ELR55260.1| Pre-mRNA-splicing factor RBM22 [Bos grunniens mutus]
Length = 424
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 232 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 291
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + + WGR+ A
Sbjct: 292 FNKLIVNGRRLNVKWGRSQA 311
>gi|355715639|gb|AES05392.1| RNA binding motif protein 22 [Mustela putorius furo]
Length = 393
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 235 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 294
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + + WGR+ A
Sbjct: 295 FNKLIVNGRRLNVKWGRSQA 314
>gi|296193255|ref|XP_002744418.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Callithrix jacchus]
Length = 420
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|281345654|gb|EFB21238.1| hypothetical protein PANDA_006585 [Ailuropoda melanoleuca]
Length = 376
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 184 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 243
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 244 FNKLIVNGRRLNVKWGRSQAAR 265
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + R +R A + S + + + + + S A NT+++VG +
Sbjct: 194 MNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA-----------DNTSVYVGNI 242
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
T+ DLR+ FS YG+IA V++ + FV++ +E A +A+ ++NG + VR
Sbjct: 243 SQQTTETDLRESFSTYGDIAEVRVFKTQRYAFVRYDKKECATKAIMEMNGKELTGNQVRC 302
Query: 124 SWGRNPA 130
SWGR A
Sbjct: 303 SWGRTQA 309
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKL 111
+FVG L +V++E L+ F +YGE++ K+ KG GFV F N++NAE A+ +
Sbjct: 135 VFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAIAGM 194
Query: 112 NGTVIGKQSVRLSWG 126
NG IGK++VR +W
Sbjct: 195 NGKWIGKRAVRTNWA 209
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 203 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 262
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 263 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 316
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 176
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|426229912|ref|XP_004009027.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 1 [Ovis aries]
Length = 430
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|403285535|ref|XP_003934078.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Saimiri boliviensis
boliviensis]
Length = 420
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 214 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 273
Query: 115 VIGKQSVRLSWGRNP--ANKQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ K F + DY QWS Y Q Y Y G+ +P
Sbjct: 274 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 327
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 91 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 150
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVR 122
GFV F N+ +AE A+ + G +G + +R
Sbjct: 151 GFVSFYNKLDAENAIVHMGGQWLGGRQIR 179
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAEEALHKLNGT 114
+VG L +VT+ + Q FSQ G S K+ FV+F +A AL +NG
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 81
Query: 115 VIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 82 KILGKEVKVNWATTPSSQK 100
>gi|149018880|gb|EDL77521.1| rCG25679, isoform CRA_b [Rattus norvegicus]
Length = 1028
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 263 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 322
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG +I ++L WG+
Sbjct: 323 AFMNRRDAERALKNLNGKMIMSFEMKLGWGK 353
>gi|61371511|gb|AAX43680.1| RNA binding motif protein 22 [synthetic construct]
Length = 421
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 217 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 276
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 277 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 330
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAE 105
D + +FVG L P +T ED++ F+ +G+I+ ++ KG GFV F N+ +AE
Sbjct: 106 DQDHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 165
Query: 106 EALHKLNGTVIGKQSVRLSWG-RNP 129
A+ + G +G + +R +W R P
Sbjct: 166 NAIVHMGGQWLGGRQIRTNWATRKP 190
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E D T++VG L +VT+ + Q FSQ G S K+ FV+F +A
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|354488436|ref|XP_003506375.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 431
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 239 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 298
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 299 FNKLIVNGRRLNVKWGRSQAAR 320
>gi|339242463|ref|XP_003377157.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316974060|gb|EFV57598.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 352
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q Q + A + NTT++V
Sbjct: 154 IEQMNGQWLGRRTIRTNWAT--RKPGLPAQNLGQLTFDDVMA-------QSSPQNTTVYV 204
Query: 61 GGLDPNVT--DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
G + N T +DLR+ F+++G I V++ +G FV+F N+E+A A+ + GT I
Sbjct: 205 GSVAANTTGTHDDLRRIFARFGSILEVRVFKQQGYAFVRFDNKESAAHAILNITGTEING 264
Query: 119 QSVRLSWGR 127
SVR SWG+
Sbjct: 265 SSVRCSWGK 273
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGG-------LDPNVTDEDLRQPFSQYGEIASVKIPVGKG 92
N A G Q++ D+S + + L V + L S I ++ KG
Sbjct: 79 NWATSPGTQAKVDTSKKHLLLMEKFRKRPPLHQIVRADSLLFISSDVKVIRDLQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV + + ++AE A+ ++NG +G++++R +W R P
Sbjct: 139 YGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKP 176
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
++NT+++VGG+ P TDE+L Q FS + V++ +G FV++ N++ A A+ +N
Sbjct: 123 AANTSVYVGGISPVTTDEELMQSFSAIATVIEVRLFKQQGYAFVRYLNKDAAARAIMSMN 182
Query: 113 GTVIGKQSVRLSWGR 127
G VI Q +R SW R
Sbjct: 183 GKVINGQKIRCSWSR 197
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQ 97
Q P+ + S N +FVG L V + L+ F +GEI+ K+ KG GFV
Sbjct: 10 SQSPKVDT-SKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVS 68
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWG 126
F +ENA++A+ ++NG +IG++ +R +W
Sbjct: 69 FPVKENAQKAIEEMNGQMIGRRQIRTNWA 97
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 280 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 333
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 156
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 193
>gi|338713130|ref|XP_001917686.2| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Equus caballus]
Length = 421
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 210 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 269
Query: 115 VIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 270 TIEGHVVKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVP 323
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 87 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 146
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 147 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 183
>gi|301765526|ref|XP_002918204.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Ailuropoda
melanoleuca]
Length = 454
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 262 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 321
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 322 FNKLIVNGRRLNVKWGRSQAAR 343
>gi|426229914|ref|XP_004009028.1| PREDICTED: pre-mRNA-splicing factor RBM22 isoform 2 [Ovis aries]
Length = 417
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|452821583|gb|EME28612.1| U2-associated protein SR14 isoform 1 [Galdieria sulphuraria]
Length = 610
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 96
G GD T IF+G L+P+ T+E L + F ++G + S+KI G GFV
Sbjct: 129 GSHDSGDPLTTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFV 188
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGG 149
F R++AE AL L GT++ VRL+WG+ P + + + SG YGG
Sbjct: 189 SFMERDDAEAALEALQGTLLDGFLVRLAWGK-PVKRPLKPL--SPPSGFVYGG 238
>gi|351702162|gb|EHB05081.1| Pre-mRNA-splicing factor RBM22 [Heterocephalus glaber]
Length = 420
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|66802614|ref|XP_635179.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
gi|60463492|gb|EAL61677.1| RNA recognition motif RNP-1 domain-containing protein
[Dictyostelium discoideum AX4]
Length = 463
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG Y +++P+++ T ++ Q S+ S D +NT I+V
Sbjct: 172 LIDMNGFYINNKPIKVNNPTHKR---LNSQTSTIPDLTS-----------TDPNNTAIYV 217
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
LD + + L+ F YGEI+ +K+ K FV F NRE+AE A LN +G
Sbjct: 218 SQLDHYIDEGVLQTIFGAYGEISYIKMLTNKFSAFVNFVNRESAEAAF-GLNNFPVGNTR 276
Query: 121 VRLSWGRNPA 130
+++ WG+N A
Sbjct: 277 LKVQWGKNVA 286
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFS-QYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S+ ++++G L +VTD+ L F +Y + S ++ + +G GFV+FA+ ++
Sbjct: 111 SDLSLYIGDLATDVTDQQLMNAFQGRYPSVRSARVIMDSATGISRGYGFVKFASDVEKDK 170
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRA 136
AL +NG I + ++++ NP +K+ +
Sbjct: 171 ALIDMNGFYINNKPIKVN---NPTHKRLNS 197
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
++NTTI+VGG+ +T++ L+ F Q+GEI ++I KG FV+F + A +A+ ++
Sbjct: 259 AANTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIFKDKGFSFVRFDSHVAATQAIVTMH 318
Query: 113 GTVIGKQSVRLSWGRNP--ANKQFRA 136
G ++G Q+ + SWG+ P NKQ A
Sbjct: 319 GKIVGDQACKCSWGKEPTFTNKQVLA 344
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 24 SSGYQQQYSSQG----GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQY 79
S Q Q+SS G N SE DS + IFVG L P V DE L FS +
Sbjct: 123 SESDQSQHSSNSKINHGTTDNVTSTTRSLSEDDSFH--IFVGDLAPEVQDETLLAAFSNF 180
Query: 80 GEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPAN 131
G I KI KG GFV +A R+ AE A+ +NG +IG +++R +W ++PA+
Sbjct: 181 GTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIMNGQIIGSRAIRTNWAVRKDPAD 240
Query: 132 K 132
+
Sbjct: 241 Q 241
>gi|242066226|ref|XP_002454402.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
gi|241934233|gb|EES07378.1| hypothetical protein SORBIDRAFT_04g030200 [Sorghum bicolor]
Length = 491
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDNRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
N VI ++L WG+ A K + G Q
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPKPEEDESGRQ 314
>gi|452821584|gb|EME28613.1| U2-associated protein SR14 isoform 2 [Galdieria sulphuraria]
Length = 605
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV---------GKGCGFV 96
G GD T IF+G L+P+ T+E L + F ++G + S+KI G GFV
Sbjct: 124 GSHDSGDPLTTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFV 183
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGG 149
F R++AE AL L GT++ VRL+WG+ P + + + SG YGG
Sbjct: 184 SFMERDDAEAALEALQGTLLDGFLVRLAWGK-PVKRPLKPL--SPPSGFVYGG 233
>gi|395817744|ref|XP_003782315.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Otolemur garnettii]
Length = 406
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGR 127
N ++ + + + WGR
Sbjct: 288 FNKLIVNGRRLNVKWGR 304
>gi|358333735|dbj|GAA52209.1| U2-associated protein SR140 [Clonorchis sinensis]
Length = 1340
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 26 GYQQQYSSQGGYASNGAPGQGPQS--------------EGDSSNTTIFVGGLDPNVTDED 71
G+ QQ S G +G+P +GD + T +F+G L+P +T++
Sbjct: 245 GFTQQSSGVGLLGDSGSPSNIYGRRGQRDRRDDYPYDFDGDRTTTNLFLGNLNPKMTEQQ 304
Query: 72 LRQPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
L + F +YG +ASVKI G+ CGFV F NR++ E AL + G + ++
Sbjct: 305 LCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDGERALDNIRGKELMGFEMK 364
Query: 123 LSWGRN 128
L WG++
Sbjct: 365 LGWGKS 370
>gi|260830806|ref|XP_002610351.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
gi|229295716|gb|EEN66361.1| hypothetical protein BRAFLDRAFT_145268 [Branchiostoma floridae]
Length = 435
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT+++GGL +T++DLR F Q+GEI S+ + + C F+QF +R AE A +
Sbjct: 228 DRSITTLYIGGLGDKITEQDLRDHFYQFGEIRSITMVARQQCAFIQFTSRPAAEMAAERT 287
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N +I + + + WGR+ A
Sbjct: 288 FNKLIINGRRLSVRWGRSQA 307
>gi|213983047|ref|NP_001135684.1| U2 snRNP-associated SURP domain containing [Xenopus (Silurana)
tropicalis]
gi|197245900|gb|AAI68618.1| Unknown (protein for MGC:186104) [Xenopus (Silurana) tropicalis]
Length = 970
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD S T +++G ++P + +E L Q F ++G +ASVKI + CGFV
Sbjct: 206 GSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFV 265
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F NR +AE AL LNG ++ ++L WG+
Sbjct: 266 AFMNRRDAERALKNLNGKMVMNFEMKLGWGK 296
>gi|195027159|ref|XP_001986451.1| GH20523 [Drosophila grimshawi]
gi|193902451|gb|EDW01318.1| GH20523 [Drosophila grimshawi]
Length = 969
Score = 67.0 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 208 GSFDTGDPNTTNLYLGNLNPKISEQQLMEIFGRYGPLASIKIMWPRSEEEKQRGRNCGFV 267
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ +R++AE AL LNG I +RL WG+
Sbjct: 268 AYMSRKDAERALRTLNGRYIMGYEMRLGWGK 298
>gi|83715976|ref|NP_001032907.1| pre-mRNA-splicing factor RBM22 [Bos taurus]
gi|115502617|sp|Q3B7L8.1|RBM22_BOVIN RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|78174395|gb|AAI07552.1| RNA binding motif protein 22 [Bos taurus]
Length = 420
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKFIVNGRRLNVKWGRSQAAR 309
>gi|16549891|dbj|BAB70875.1| unnamed protein product [Homo sapiens]
Length = 450
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 213
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 273
Query: 143 S-----GAYYGGQVYDGYGY 157
GA YG ++Y + +
Sbjct: 274 KLSPVVGAVYGPELYAAFSF 293
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT + + Q S+ Q N T++
Sbjct: 116 IVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQS-----SPKNCTVYC 170
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +TD+ +RQ FS +G+I + GKG FV+F+ E+A A+ +NGT I
Sbjct: 171 GGIASGLTDQLMRQTFSPFGQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 230
Query: 121 VRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 231 VKCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYVTNGWQVP 278
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 138
>gi|148231899|ref|NP_001080776.1| pre-mRNA-splicing factor RBM22 [Xenopus laevis]
gi|82241534|sp|Q7ZXB5.1|RBM22_XENLA RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|28280011|gb|AAH45067.1| Cg14641-prov protein [Xenopus laevis]
Length = 417
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA R++AE A K
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + + WGR+ A
Sbjct: 288 FNKLIVNGRRLNVKWGRSQA 307
>gi|413952999|gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 493
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|226509868|ref|NP_001151426.1| LOC100285059 [Zea mays]
gi|195646758|gb|ACG42847.1| pre-mRNA-splicing factor SLT11 [Zea mays]
Length = 490
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|223974935|gb|ACN31655.1| unknown [Zea mays]
gi|413952998|gb|AFW85647.1| hypothetical protein ZEAMMB73_699245 [Zea mays]
Length = 441
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + T+++GGLD +T++DLR F +GEI S+++ + + FV + RE AE+A +L
Sbjct: 224 DETIRTLYIGGLDSRITEQDLRDQFYAHGEIESIRMVLQRAIAFVTYTTREGAEKAAEEL 283
Query: 112 -NGTVIGKQSVRLSWGRNPANK 132
N VI ++L WG+ A K
Sbjct: 284 ANKLVIKGVRLKLMWGKPQAPK 305
>gi|417410164|gb|JAA51559.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 372
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 77 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 136
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ A Y N W
Sbjct: 137 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVAPYANGWK 196
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 197 LSPVVGAVYGPELY 210
>gi|448107329|ref|XP_004205333.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|448110297|ref|XP_004201597.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359382388|emb|CCE81225.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
gi|359383153|emb|CCE80460.1| Piso0_003577 [Millerozyma farinosa CBS 7064]
Length = 460
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSE------GDSS 54
+TEMNG SR +R+G A+ S Q++ G +++ Q PQ + D
Sbjct: 244 LTEMNGYQVGSRSIRVGMASGSNMSINQEKSPYPDGVSASQI--QIPQYQPPLNHITDPE 301
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT+ V GL N T +DL F +G I I G ++F R +AE+A+ +G
Sbjct: 302 NTTLRVDGLPANFTPDDLALHFINFGNIVHCHISPDHSFGLIKFLVRTDAEKAMLYAHGA 361
Query: 115 VIGKQSVRLSWGRNPANKQ 133
++ V+++WG+N + Q
Sbjct: 362 ILDGCRVKVTWGKNDTDSQ 380
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 20/122 (16%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
S++ +++ A+ S+ QQ + QGG S+ +S+ D S IFVG L +V++
Sbjct: 150 STKTLKLNWAS--GSNSLQQDNAKQGGRFSS-------KSQNDYS---IFVGDLGMDVSE 197
Query: 70 EDLRQPFSQY--GEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
L + F++ G+I VKI + KG GFV+FA+ + ++AL ++NG +G +S+
Sbjct: 198 TLLFESFNRNYPGQIKQVKIMIDPVTKLSKGFGFVKFASPHSQQKALTEMNGYQVGSRSI 257
Query: 122 RL 123
R+
Sbjct: 258 RV 259
>gi|218197672|gb|EEC80099.1| hypothetical protein OsI_21840 [Oryza sativa Indica Group]
Length = 617
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 41 GAPGQGPQ--SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQF 98
G G+ P D S T+++GGL+ +T++DLR F +GEI S+++ + + C FV +
Sbjct: 343 GKAGEMPSLTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTY 402
Query: 99 ANRENAEEALHKL-NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYG 148
RE AE+A +L N VI ++L WG+ A K + G Q A+ G
Sbjct: 403 TTREGAEKAAEELANKLVIKGIRLKLMWGKPQAPKPEEDEAGRQGHVAHGG 453
>gi|410354759|gb|JAA43983.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 366
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 142 WS-----GAYYGGQVY 152
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|307166394|gb|EFN60531.1| U2-associated protein SR140 [Camponotus floridanus]
Length = 1023
Score = 66.6 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 274 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 333
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 334 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 365
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNAKQLTY----EEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR-------------NPANKQFRADYGNQWSGAYYGG 149
V+ WG+ P+ F YG QW G +YGG
Sbjct: 279 VKCYWGKETPDMLNPVQQVSEPSQISFPPPYG-QW-GQWYGG 318
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A +L +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYC-FVEFFEHRHAAASLAAI 66
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRAD 137
NG I + V+++W P++++ A+
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDAN 92
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ M G + R +R AT RK + Y S + S + S+ SN T++
Sbjct: 153 IQHMGGQWLGGRQIRTNWAT-RKPPAPKTTYESNSKHLSF----EEVMSQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVSSGLTEQLMRQTFSAFGQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHV 267
Query: 121 VRLSWGR 127
V+ WG+
Sbjct: 268 VKCYWGK 274
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+
Sbjct: 87 QKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNK 146
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
+AE A+ + G +G + +R +W R P
Sbjct: 147 WDAENAIQHMGGQWLGGRQIRTNWATRKP 175
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q F+Q G S K+ V C FV+F + +A
Sbjct: 3 DDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYC-FVEFYDHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
+L +NG I + V+++W P +++
Sbjct: 62 SLAAMNGRKIMGKEVKVNWATTPTSQK 88
>gi|291243067|ref|XP_002741428.1| PREDICTED: RNA binding motif protein 22-like [Saccoglossus
kowalevskii]
Length = 429
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL ++++DLR F Q+GEI S+ + + C FVQF R+++E A +
Sbjct: 228 DRTITTLYVGGLGDKISEKDLRDHFYQFGEIRSINVVARQQCAFVQFTTRQSSELAAERS 287
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + + WGR+ A
Sbjct: 288 FNKLIMNGRRLNIKWGRSQA 307
>gi|324509922|gb|ADY44154.1| Pre-mRNA-splicing factor RBM22 [Ascaris suum]
Length = 412
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 48 QSEGDSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
Q D++ TT++VG L P +T+ DLR F Q+GEI S+ + V +GC F+ F R+ AE
Sbjct: 226 QPPEDTTITTLYVGDLGPAGTITEADLRDYFYQFGEIRSLNVLVSRGCAFIAFTTRQAAE 285
Query: 106 EALHK-LNGTVIGKQSVRLSWGR 127
A + N ++ + +++ WGR
Sbjct: 286 RAADRSFNKLILQGRRLKIRWGR 308
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 32/173 (18%)
Query: 36 GYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PV--- 89
+A+N +P P+ G S +I+ G LD + +EDL+ F +GEI ++K+ PV
Sbjct: 90 NWATN-SPNGMPKVIGTS--VSIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNH 146
Query: 90 GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGA--- 145
K F+ F N+ +AE+A+ +++G ++ ++++ +W RN K+ DY + GA
Sbjct: 147 SKNIAFISFTNKPDAEKAIREMHGAMLKTRAIKTNWATRNQNQKKEEQDYDEVYKGASAD 206
Query: 146 ----YYGG--------QV---YDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGS 183
Y GG Q+ +D YG + D ++AA A+ + + +
Sbjct: 207 NTTVYAGGIPSNCTEEQIRSHFDDYGKIV----DVRIFAAKNYAFIKFDTHAN 255
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM+G +R ++ AT ++ ++Q + GA + NTT++
Sbjct: 165 IREMHGAMLKTRAIKTNWATRNQNQKKEEQDYDE---VYKGAS---------ADNTTVYA 212
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
GG+ N T+E +R F YG+I V+I K F++F NA A+ K NGT
Sbjct: 213 GGIPSNCTEEQIRSHFDDYGKIVDVRIFAAKNYAFIKFDTHANAATAICKSNGT 266
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTD----EDLRQPFSQYGE-IASVKIPVG-----KGCGFV 96
P D++ T ++VG LD VTD LR E + S + G +G FV
Sbjct: 3 PSDVPDANATVLYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFV 62
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
QF + +A ++++ LNG + V+++W N N
Sbjct: 63 QFEDNISAMQSMNFLNGREFCGKKVKVNWATNSPN 97
>gi|133925801|ref|NP_001076046.1| RNA binding protein fox-1 homolog 2 isoform 4 [Homo sapiens]
Length = 370
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 142 WS-----GAYYGGQVY 152
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEA 107
++ TIFVG LD ++TD +LRQ F +GEI + K+ K GF+ F N+ +AE A
Sbjct: 69 ASITIFVGDLDDDLTDSELRQAFEPFGEILNAKVVRDAATEKSKNYGFISFTNKPDAERA 128
Query: 108 LHKLNGTVIGKQSVRLSWG-RNPANKQFRADY 138
+ ++G ++ ++ ++ +W RN +K + DY
Sbjct: 129 IRDMHGAMLKRRPIKTNWATRNQNSKPSQLDY 160
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M+G RP++ AT ++S Q Q E SN T++V
Sbjct: 129 IRDMHGAMLKRRPIKTNWATRNQNSKPSQLDYDQVF------------KEVSESNCTVYV 176
Query: 61 GGLDPNVTDEDLRQPFSQYGEIA-SVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
L ++DE L + F G+I + ++ GK F++F + A A+ K NG+ +
Sbjct: 177 TNLPDRISDEVLVKHFEDCGKIVGTPRVFDGKNFAFIRFESHAAATTAIVKGNGSELNGA 236
Query: 120 SVRLSWGRNPANKQ 133
++ WG++ + Q
Sbjct: 237 ILKCWWGKDSESHQ 250
>gi|410965631|ref|XP_003989347.1| PREDICTED: RNA binding protein fox-1 homolog 2 [Felis catus]
Length = 411
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 105 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 164
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 165 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 224
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 225 KLSPVVGAVYGPELY 239
>gi|383849268|ref|XP_003700267.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Megachile rotundata]
Length = 936
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 277
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + + GG G P D T+F+
Sbjct: 229 IQEMQGKEIDGRPINVDMSTSKPA----------GGNDRAKKFGDVPSEPSD----TLFL 274
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L N +++ + FS+YGEI SV+IP KG G+VQF+N E+A++AL L G
Sbjct: 275 GNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGE 334
Query: 115 VIGKQSVRLSWGR-NPAN 131
I ++VRL + PAN
Sbjct: 335 YIDNRAVRLDYSTPRPAN 352
>gi|341823643|dbj|BAK53481.1| RBFOX2 [Homo sapiens]
Length = 391
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 142 WS-----GAYYGGQVY 152
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 49 SEGDSSNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
S+ +NTT++ GG P+V +DE + + F Q+G I V++ KG F++F +E A A
Sbjct: 217 SQSSPTNTTVYCGGFQPHVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVAKEAAARA 276
Query: 108 LHKLNGTVIGKQSVRLSWGR 127
+ + T + V+ WG+
Sbjct: 277 IEHTHNTEVHGNHVKCFWGK 296
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD V++E L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+N V + ++++W +P N
Sbjct: 63 TAMNKRVFLDKEIKVNWATSPGN 85
>gi|308153271|ref|NP_001184003.1| U2-associated SR140 protein-like [Danio rerio]
Length = 968
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVG 90
+ APG GD + T +++G ++P + +E L Q F +YG +ASVKI
Sbjct: 194 DSAPGS--HDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARE 251
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ CGFV F R +AE AL LNG +I ++L WG+
Sbjct: 252 RNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGK 288
>gi|322786770|gb|EFZ13115.1| hypothetical protein SINV_15313 [Solenopsis invicta]
Length = 320
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV F +R
Sbjct: 192 GDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAFMSR 251
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++ E AL LNG I + ++L WG+
Sbjct: 252 KDGERALKNLNGRDIMQYEMKLGWGK 277
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+ + SS+ IFVG L P + LR+ F+ +GEI++ +I KG F
Sbjct: 85 SPGNQPKQD-TSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAF 143
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQFRADYGNQWSGAY 146
V F + AE A+H +NG +G +S+R +W + P + R+ GN + +Y
Sbjct: 144 VSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRTERSRQGNAKAVSY 196
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + +R +R +T RK + + S QG + + ++ +N T++ GG
Sbjct: 159 MNGQWLGNRSIRTNWST-RKPPPPRTERSRQGN--AKAVSYEEVYNQSSPTNCTVYCGGF 215
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+ ++ + + FS++G I ++ KG F++F+ +E A A+ ++ I Q V+
Sbjct: 216 TNGINEDLIEKAFSRFGTIQDIRSFKDKGYAFIRFSTKEAATHAIEAMHNAEINGQQVKC 275
Query: 124 SWGRNPANKQFRADYGNQW-----------SGAYYGGQVYDGYGYAIPPPN--DPSMYAA 170
WG+ ++ + + A+Y Q Y GY PP P + AA
Sbjct: 276 FWGKESSDPATAQNAQQPQQVQQSGSSVAAANAHYPYQTYTEVGYWYPPGTYQAPPVTAA 335
Query: 171 A--------------AAAYGAYP 179
A AAAYG +P
Sbjct: 336 AQMPGQYLQGVQPHYAAAYGQFP 358
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD +VT++ L FSQ G + KI P FV+F N + A AL +N
Sbjct: 11 TLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTALIAMNK 70
Query: 114 TVIGKQSVRLSWGRNPANK 132
+ ++ ++++W +P N+
Sbjct: 71 RHVLEKEIKVNWATSPGNQ 89
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESN----TKQLTYEEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANK----QFRADYGNQWSGAYYGG 149
V+ WG+ NP + F YG QW G +YGG
Sbjct: 279 VKCYWGKETPDMLNPVQQASQISFPPPYG-QW-GQWYGG 315
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A +L +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYC-FVEFFEHRHAAASLAAM 66
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRAD 137
NG I + V+++W P++++ A+
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDAN 92
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DE + + F Q+G I V++ KG F++F ++E A A+ +
Sbjct: 221 TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIEHTH 280
Query: 113 GTVIGKQSVRLSWGR 127
+ + V+ WG+
Sbjct: 281 NSEVHGNHVKCFWGK 295
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+N V + ++++W +P N
Sbjct: 63 TAMNKRVFLDKEIKVNWATSPGN 85
>gi|444523963|gb|ELV13665.1| U2 snRNP-associated SURP motif-containing protein [Tupaia
chinensis]
Length = 708
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R++ + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 231 RRNMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 288
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 289 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGK 343
>gi|383849266|ref|XP_003700266.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Megachile rotundata]
Length = 967
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|126290582|ref|XP_001369324.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Monodelphis domestica]
Length = 420
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|395819876|ref|XP_003783304.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Otolemur
garnettii]
Length = 376
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|328793609|ref|XP_397019.4| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Apis mellifera]
Length = 966
Score = 66.2 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|338721254|ref|XP_003364341.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 3
[Equus caballus]
Length = 376
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|350410111|ref|XP_003488949.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus impatiens]
Length = 968
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|350410108|ref|XP_003488948.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus impatiens]
Length = 937
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 277
>gi|340720343|ref|XP_003398600.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus terrestris]
Length = 937
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 186 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 245
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 246 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 277
>gi|432114097|gb|ELK36142.1| Pre-mRNA-splicing factor RBM22 [Myotis davidii]
Length = 384
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +T+ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DRTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + WGR+ A
Sbjct: 288 FNKLIVNGPRLNVQWGRSQA 307
>gi|340720345|ref|XP_003398601.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus terrestris]
Length = 968
Score = 66.2 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 215 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 274
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 275 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 306
>gi|395504854|ref|XP_003756761.1| PREDICTED: pre-mRNA-splicing factor RBM22 [Sarcophilus harrisii]
Length = 420
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|133919898|emb|CAL91352.1| RNA binding motif protein 9 [Homo sapiens]
Length = 398
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 92 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 151
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 152 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 211
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 212 KLSPVVGAVYGPELY 226
>gi|449267139|gb|EMC78105.1| Pre-mRNA-splicing factor RBM22 [Columba livia]
Length = 420
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAAR 309
>gi|328701605|ref|XP_001946045.2| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Acyrthosiphon pisum]
Length = 938
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGF 95
+G GD + T +++G L+P +T+ L + F +YG +AS+KI G+ CGF
Sbjct: 178 KGSFDSGDPNTTNLYLGNLNPKITEAQLMEVFGKYGPLASIKIMWPRSDEEKARGRNCGF 237
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
V + +R++ E AL LNG + +++ WG++
Sbjct: 238 VAYMSRKDGERALKNLNGKDVMSYEMKMGWGKS 270
>gi|403283100|ref|XP_003932965.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|344296422|ref|XP_003419906.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Loxodonta
africana]
Length = 404
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 112 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 171
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 172 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 231
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 232 KLSPVVGAVYGPELY 246
>gi|72534682|ref|NP_001026865.1| RNA binding protein fox-1 homolog 2 isoform 1 [Homo sapiens]
gi|18461369|gb|AAL71905.1|AF229058_1 hexaribonucleotide binding protein 2 [Homo sapiens]
gi|19264130|gb|AAH25281.1| RNA binding motif protein 9 [Homo sapiens]
gi|410354757|gb|JAA43982.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 380
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|380026763|ref|XP_003697113.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Apis florea]
Length = 944
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L + F +YG +AS+KI + CGFV
Sbjct: 193 GSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFV 252
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 253 AFMSRKDGERALKNLNGRDIMQYEMKLGWGKS 284
>gi|345777109|ref|XP_862055.2| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 7 [Canis
lupus familiaris]
Length = 376
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|256075299|ref|XP_002573957.1| rna binding motif protein [Schistosoma mansoni]
gi|360044844|emb|CCD82392.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 425
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TT+++GG+ +T++DLR F Q+GE+ SV + + C F+QFA R AE A +
Sbjct: 244 DRTITTLYIGGIPDGMTEKDLRNHFYQFGELRSVNLHAKQHCAFIQFATRGAAERAAERT 303
Query: 112 -NGTVIGKQSVRLSWGRNPA 130
+ ++G + ++WG++PA
Sbjct: 304 YDRLILGGHRLTVNWGKSPA 323
>gi|402884086|ref|XP_003905523.1| PREDICTED: uncharacterized protein LOC101004828 [Papio anubis]
Length = 764
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 457 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 516
Query: 88 PV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N
Sbjct: 517 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 576
Query: 142 WS-----GAYYGGQVYDGYGY 157
W GA YG ++Y +
Sbjct: 577 WKLSPVVGAVYGPELYAASSF 597
>gi|334311193|ref|XP_003339587.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Monodelphis
domestica]
Length = 422
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT++VGGL +++ DLR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKTITTLYVGGLGDTISEADLRNHFYQFGEIRTITVVQRQHCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPANK 132
N ++ + + + WGR+ A +
Sbjct: 288 FNKLILNGRRLNVKWGRSQAAR 309
>gi|224106323|ref|XP_002314129.1| predicted protein [Populus trichocarpa]
gi|222850537|gb|EEE88084.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD + ++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAEL 283
Query: 112 -NGTVIGKQSVRLSWGRN--PANKQFRADYGNQWSGAYYGGQV 151
N VI ++L WGR P + +D Q + + G +
Sbjct: 284 SNRLVIKGLRLKLMWGRPQAPKPESESSDEARQQAAMAHSGML 326
>gi|449481865|ref|XP_002199304.2| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 1
[Taeniopygia guttata]
Length = 347
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 66 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 125
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 126 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 185
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 186 LSPVVGAVYGPELY 199
>gi|133925799|ref|NP_001076045.1| RNA binding protein fox-1 homolog 2 isoform 3 [Homo sapiens]
gi|332859481|ref|XP_001143459.2| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Pan
troglodytes]
gi|395753297|ref|XP_002831104.2| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 1
[Pongo abelii]
gi|397501803|ref|XP_003821564.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Pan
paniscus]
gi|47678649|emb|CAG30445.1| RBM9 [Homo sapiens]
gi|109451458|emb|CAK54590.1| RBM9 [synthetic construct]
gi|109452054|emb|CAK54889.1| RBM9 [synthetic construct]
gi|208965474|dbj|BAG72751.1| RNA binding motif protein 9 [synthetic construct]
gi|383411977|gb|AFH29202.1| RNA binding protein fox-1 homolog 2 isoform 3 [Macaca mulatta]
gi|410222442|gb|JAA08440.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410265956|gb|JAA20944.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410307444|gb|JAA32322.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410354753|gb|JAA43980.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 376
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|332231106|ref|XP_003264739.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 1 [Nomascus
leucogenys]
Length = 376
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 84 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 143
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 144 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 203
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 204 KLSPVVGAVYGPELY 218
>gi|338721252|ref|XP_003364340.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Equus caballus]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|166918879|sp|A6QPR6.2|RFOX2_BOVIN RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName: Full=RNA-binding motif
protein 9; AltName: Full=RNA-binding protein 9
Length = 394
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 102 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 161
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 162 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 221
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 222 KLSPVVGAVYGPELY 236
>gi|329299071|ref|NP_001192301.1| RNA binding protein fox-1 homolog 2 [Bos taurus]
Length = 449
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 153 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 212
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 213 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 272
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 273 KLSPVVGAVYGPELY 287
>gi|151556970|gb|AAI49448.1| RBM9 protein [Bos taurus]
Length = 407
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 115 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 174
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 175 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 234
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 235 KLSPVVGAVYGPELY 249
>gi|321462927|gb|EFX73947.1| hypothetical protein DAPPUDRAFT_215373 [Daphnia pulex]
Length = 899
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD + T I++G ++P +T++ L F +YG +ASVKI + CGFV F R
Sbjct: 170 GDPNTTNIYLGNINPKMTEQQLMDTFGKYGPLASVKIMWPRTEEEKARNRNCGFVAFMCR 229
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++AE A+ KLNG I ++L WG+
Sbjct: 230 KDAERAMKKLNGKDILSFEMKLGWGK 255
>gi|224106319|ref|XP_002314127.1| predicted protein [Populus trichocarpa]
gi|222850535|gb|EEE88082.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++VGGLD + ++DLR F +GEI S+K+ + FV + RE AE+A +L
Sbjct: 224 DESIKTLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAEL 283
Query: 112 -NGTVIGKQSVRLSWGRN--PANKQFRADYGNQWSGAYYGGQV 151
N VI ++L WGR P + +D Q + + G +
Sbjct: 284 SNRLVIKGLRLKLMWGRPQAPKPESESSDEARQQAAMAHSGML 326
>gi|62529142|gb|AAX84843.1| RNA binding motif protein 9 [Homo sapiens]
Length = 370
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 31 YSSQGGYASNGAPGQ---GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SEG S+ + V + D DLRQ F Q+G+I V+I
Sbjct: 83 LTTEGGAQTDGQQSQTQSSENSEGKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 142
Query: 88 PV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N
Sbjct: 143 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 202
Query: 142 WS-----GAYYGGQVY 152
W GA YG ++Y
Sbjct: 203 WKLSPVVGAVYGPELY 218
>gi|302815924|ref|XP_002989642.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
gi|300142613|gb|EFJ09312.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
Length = 473
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D++ T++VGGLD VT EDL+ F YGEI S+++ + C F+ + RE+AE+A L
Sbjct: 146 DATVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL 205
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQV 151
+ + S L W ++ + G W A G Q+
Sbjct: 206 SFKHQSRTSKLLKW------QEIKPKLGAAWPSAKNGFQL 239
>gi|229577428|ref|NP_001153375.1| U2-associated SR140 protein [Nasonia vitripennis]
Length = 935
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFV 96
G GD + T +++G L+P +T++ L++ F ++G +AS+KI + CGFV
Sbjct: 187 GSFDNGDPNTTNLYLGNLNPKITEQQLKKIFGKFGPLASIKIMWPRSDEEKARQRNCGFV 246
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
F +R++ E AL LNG I + ++L WG++
Sbjct: 247 AFMSRKDGERALKSLNGRDIMQYEMKLGWGKS 278
>gi|403283104|ref|XP_003932967.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|395819880|ref|XP_003783306.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Otolemur
garnettii]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|395753299|ref|XP_003779585.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Pongo abelii]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR++S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 276 HTHNSEVHGNLVKCFWGK 293
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+ +
Sbjct: 220 TNTTVYCGGFPPNVISDDLMHKHFMQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTH 279
Query: 113 GTVIGKQSVRLSWGR 127
+ + V+ WG+
Sbjct: 280 ISEVHGSQVKCFWGK 294
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N V ++ ++++W +P N+
Sbjct: 63 TAMNKRVFLEKEIKVNWATSPGNQ 86
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 80 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 132
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 133 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 191
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 192 VRCSWGK 198
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQ 133
+ RE AE A+ ++NG +G++++R +W R P +++
Sbjct: 69 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQE 106
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ TP SG +S GGY AP + + ++VGGLDP VT+
Sbjct: 54 NTNPIPTAITTPM--SGNMVSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTE 103
Query: 70 EDLRQPFSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
+ L+Q F G + SVKI G GFV+F + AE A+ LNG I + +R
Sbjct: 104 DILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEIR 163
Query: 123 LSWG--RNPANKQFRADY 138
++W N ANK+ +++
Sbjct: 164 VNWAYQSNTANKEDTSNH 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 158 HQSEIRVNWAYQSNTA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 212
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F R +AE+AL ++G +G +++R +W
Sbjct: 213 VMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNW 257
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+T M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + ++ +G F++ ENA A
Sbjct: 300 VQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQADRGFAFIKMDTHENAASA 359
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +LNG + + ++ SWG++ P QF
Sbjct: 360 ICQLNGYNVNGRPLKCSWGKDRPPTGQF 387
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 42 APGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCG 94
AP ++ D+SN IFVG + P + + LR+ FS +G + KI KG G
Sbjct: 98 APINNISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYG 157
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
FV +A +E AEEAL+K+NG +G + +R +W R P
Sbjct: 158 FVAYATKEEAEEALNKMNGKFLGTRQIRTNWAIRRP 193
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 26/136 (19%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR---------KSSGYQQQYSSQGGYASNGAPGQGPQSEG 51
+ +MNG + +R +R A R K Y + +++
Sbjct: 171 LNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPLDYNEVFAA-----------------S 213
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
SN TI+VGG+ + +E LR+ F ++G+I V+I KG FV+F + E A +A+ ++
Sbjct: 214 SESNCTIYVGGITNGLCEELLRESFKEFGDILEVRIFKEKGYAFVRFDSHEGATQAIIRM 273
Query: 112 NGTVIGKQSVRLSWGR 127
+G +G Q + SWG+
Sbjct: 274 HGKEVGSQLCKCSWGK 289
>gi|410222440|gb|JAA08439.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410265954|gb|JAA20943.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410307440|gb|JAA32320.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410307442|gb|JAA32321.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410354755|gb|JAA43981.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 446
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 213
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 273
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 KLSPVVGAVYGPELY 288
>gi|332231110|ref|XP_003264741.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Nomascus
leucogenys]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG RP+R A R G + YA + ++NT+++V
Sbjct: 189 IEKMNGQMIGRRPIRTNWAVRRFDGGEE--------YAMKPPTYDNIFNATHATNTSVYV 240
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ P TDE+L QPFS + V++ +G FV++ ++ A A+ ++G I Q
Sbjct: 241 GGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMHGKEINGQK 300
Query: 121 VRLSWGR 127
++ SW R
Sbjct: 301 IKCSWSR 307
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
P+S+ NT +FVG L V L+ F +GEI+ K+ K GFV
Sbjct: 118 PRSQSPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG 126
FA +ENAE+A+ K+NG +IG++ +R +W
Sbjct: 178 SFAVKENAEKAIEKMNGQMIGRRPIRTNWA 207
>gi|221486024|gb|EEE24294.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 865
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 276 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 335
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
GFV F +R AE A H L+G +R+ WG++
Sbjct: 336 GFVSFESRPQAEAAKHNLDGVSFYGMVIRIGWGKS 370
>gi|119580477|gb|EAW60073.1| RNA binding motif protein 9, isoform CRA_b [Homo sapiens]
Length = 391
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|7657504|ref|NP_055124.1| RNA binding protein fox-1 homolog 2 isoform 2 [Homo sapiens]
gi|2664429|emb|CAA15842.1| hypothetical protein [Homo sapiens]
gi|119580480|gb|EAW60076.1| RNA binding motif protein 9, isoform CRA_e [Homo sapiens]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|133925805|ref|NP_001076048.1| RNA binding protein fox-1 homolog 2 isoform 6 [Homo sapiens]
gi|410222444|gb|JAA08441.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410265958|gb|JAA20945.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
gi|410307446|gb|JAA32323.1| RNA binding protein, fox-1 homolog 2 [Pan troglodytes]
Length = 450
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 213
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 273
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 KLSPVVGAVYGPELY 288
>gi|45360865|ref|NP_989108.1| pre-mRNA-splicing factor RBM22 [Xenopus (Silurana) tropicalis]
gi|82237531|sp|Q6P616.1|RBM22_XENTR RecName: Full=Pre-mRNA-splicing factor RBM22; AltName:
Full=RNA-binding motif protein 22
gi|38566013|gb|AAH62518.1| RNA binding motif protein 22 [Xenopus (Silurana) tropicalis]
gi|89267971|emb|CAJ81393.1| RNA binding motif protein 5 [Xenopus (Silurana) tropicalis]
Length = 417
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT++VGGL +++ +LR F Q+GEI ++ + + C F+QFA R+ AE A K
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
N ++ + + + WGR+ A
Sbjct: 288 FNKLIVNGRRLNVKWGRSQA 307
>gi|332859485|ref|XP_003317218.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Pan
troglodytes]
gi|397501807|ref|XP_003821566.1| PREDICTED: RNA binding protein fox-1 homolog 2 isoform 3 [Pan
paniscus]
Length = 367
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|237834785|ref|XP_002366690.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211964354|gb|EEA99549.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|221503520|gb|EEE29211.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 859
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 276 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 335
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
GFV F +R AE A H L+G +R+ WG++
Sbjct: 336 GFVSFESRPQAEAAKHNLDGVSFYGMVIRIGWGKS 370
>gi|119580476|gb|EAW60072.1| RNA binding motif protein 9, isoform CRA_a [Homo sapiens]
Length = 386
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 81 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 140
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 141 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 200
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 201 LSPVVGAVYGPELY 214
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+SS GG NG + Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPRESSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +++A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFGQFGPIQDVRVFKDKGFAFIKFVTKDSAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ T + V+ WG+
Sbjct: 276 HTHNTEVHGNLVKCFWGK 293
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V++E L F G + + KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 276 HTHNSEVHGNLVKCFWGK 293
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L F G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + + ++++W +P N+
Sbjct: 63 TAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 276 HTHNSEVHGNLVKCFWGK 293
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L F G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + + ++++W +P N+
Sbjct: 63 TAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|29840825|sp|O43251.3|RFOX2_HUMAN RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName:
Full=Hexaribonucleotide-binding protein 2; AltName:
Full=RNA-binding motif protein 9; AltName:
Full=RNA-binding protein 9; AltName: Full=Repressor of
tamoxifen transcriptional activity
gi|19584572|gb|AAL67150.1| RNA binding motif protein 9 [Homo sapiens]
Length = 390
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 94 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 153
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 154 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 213
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 214 KLSPVVGAVYGPELY 228
>gi|390458788|ref|XP_003732180.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Callithrix jacchus]
Length = 443
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 31 YSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKI 87
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 153 LTTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI 212
Query: 88 PV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQ 141
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N
Sbjct: 213 IFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANG 272
Query: 142 WS-----GAYYGGQVY 152
W GA YG ++Y
Sbjct: 273 WKLSPVVGAVYGPELY 288
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 276 HTHNSEVHGNLVKCFWGK 293
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|161016816|ref|NP_001104299.1| RNA binding protein fox-1 homolog 2 isoform 5 [Mus musculus]
gi|56122422|gb|AAV74335.1| Fxh variant 2 [Mus musculus]
Length = 378
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|119580479|gb|EAW60075.1| RNA binding motif protein 9, isoform CRA_d [Homo sapiens]
Length = 362
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 81 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 140
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 141 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 200
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 201 LSPVVGAVYGPELY 214
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 314
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 161 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 213
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 214 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 272
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 273 VRCSWGK 279
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQVYD 153
+ RE AE A+ ++NG +G++++R +W R P G+Q ++Y + YD
Sbjct: 150 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---------GDQEKPSHYNEKSYD 198
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 276 HTHNSEVHGNLVKCFWGK 293
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG RP+R A R G + YA + ++NT+++V
Sbjct: 189 IEKMNGQMIGRRPIRTNWAVRRFDGGEE--------YAMKPPTYDNIFNATHATNTSVYV 240
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ P TDE+L QPFS + V++ +G FV++ ++ A A+ ++G I Q
Sbjct: 241 GGISPATTDEELMQPFSAIATVTEVRLFKQQGYAFVRYLTKDAATRAIMFMHGKEINGQK 300
Query: 121 VRLSWGR 127
++ SW R
Sbjct: 301 IKCSWSR 307
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 47 PQSEGDSSNTT----IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
P+S+ NT +FVG L V L+ F +GEI+ K+ K GFV
Sbjct: 118 PRSQSPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFV 177
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG 126
FA +ENAE+A+ K+NG +IG++ +R +W
Sbjct: 178 SFAVKENAEKAIEKMNGQMIGRRPIRTNWA 207
>gi|440800608|gb|ELR21644.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 417
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-GKGCGFVQFANRENAEEALHKLN 112
NT +F+G LDP++T LR+ F Q+G I + V + GFV+F +R++AE A ++N
Sbjct: 140 KNTNLFIGDLDPSITSAQLREVFRQFGPIYEEETFVKNRNYGFVRFRHRKHAEMAKREMN 199
Query: 113 GTVIGKQSVRLSWG 126
V+G +++R+ WG
Sbjct: 200 NKVLGARAIRIGWG 213
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 36 GYASNGAPGQGPQS-EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--- 91
G S+G+ P++ E + +F+G L + ++ LR+ F +G I SV+I +
Sbjct: 42 GDLSSGSLDSLPEAGEFEDDERCLFIGDLARGLNEDQLREAFDPFGVI-SVEIKRDRVTN 100
Query: 92 ---GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
G GFV +RE+A A ++ V+G +++R+ W + N
Sbjct: 101 YSLGYGFVLLKSREDAGAAKKAMHRQVVGGRAIRIGWAQKNTN 143
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNW 170
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQ--------SE 50
MNG + SR +R +T PR+ S Q GG NG+ +G Q ++
Sbjct: 156 MNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQ 215
Query: 51 GDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+
Sbjct: 216 SSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIE 275
Query: 110 KLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 276 HTHNSEVHGNLVKCFWGK 293
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|384249677|gb|EIE23158.1| hypothetical protein COCSUDRAFT_42089 [Coccomyxa subellipsoidea
C-169]
Length = 986
Score = 65.5 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 94
G G +GD T ++VG L P++ +E L++ F ++G+IASVKI G+ CG
Sbjct: 157 GAGSFDDGDPYTTNLYVGNLAPDIDEEVLKREFGRFGDIASVKIMWPRDEDQRRRGRNCG 216
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
FV F R A+ A LNG ++ ++L WG++
Sbjct: 217 FVAFMTRAGADRAKADLNGAILHDLELKLGWGKS 250
>gi|328865488|gb|EGG13874.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 389
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 32 SSQGGYASNG---APGQGPQSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKI 87
+ GG A NG P+ D S +T+F+ +DP+ VT+ DLR F +G I S+K+
Sbjct: 198 TDNGGGALNGDGTRTKTAPRPPADRSISTLFLANVDPDQVTESDLRSSFLSFGNIRSIKL 257
Query: 88 PVGKGCGFVQFANRENAEEALHKLNGTV-IGKQSVRLSWGR 127
K C FV F R+ AE A+ +L G + G S++++W +
Sbjct: 258 LHDKKCAFVVFEKRDAAESAVQQLFGNLQFGDCSIKINWCK 298
>gi|348605282|ref|NP_001231766.1| RNA binding protein, fox-1 homolog (C. elegans) 2 [Sus scrofa]
Length = 381
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 90 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 142
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 143 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 201
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 202 VRCSWGK 208
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQVYD 153
+ RE AE A+ ++NG +G++++R +W R P G+Q ++Y + YD
Sbjct: 79 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---------GDQEKPSHYNEKSYD 127
>gi|26336927|dbj|BAC32147.1| unnamed protein product [Mus musculus]
Length = 349
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|158256356|dbj|BAF84149.1| unnamed protein product [Homo sapiens]
gi|384946148|gb|AFI36679.1| RNA binding protein fox-1 homolog 2 isoform 1 [Macaca mulatta]
gi|387541558|gb|AFJ71406.1| RNA binding protein fox-1 homolog 2 isoform 1 [Macaca mulatta]
Length = 381
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|119580483|gb|EAW60079.1| RNA binding motif protein 9, isoform CRA_h [Homo sapiens]
Length = 358
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 66 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 125
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 126 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 185
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 186 LSPVVGAVYGPELY 199
>gi|161016814|ref|NP_001104298.1| RNA binding protein fox-1 homolog 2 isoform 4 [Mus musculus]
gi|67626082|gb|AAY78494.1| RNA binding protein 9 isoform 1 [Mus musculus]
Length = 381
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 193 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 245
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 246 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 304
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 305 VRCSWGK 311
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQVYD 153
+ RE AE A+ ++NG +G++++R +W R P G+Q ++Y + YD
Sbjct: 182 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---------GDQEKPSHYNEKSYD 230
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T++VG LD VT++ + F+Q G + K+ + G FV+F++ A +AL +N
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKV-IFDGSNDPYAFVEFSDHGQASQALQTMN 105
Query: 113 GTVIGKQSVRLSWGRNPANKQFRAD 137
++ + ++++W P +Q + D
Sbjct: 106 KRLLLDREMKVNWAVEPGQQQSKID 130
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 51/75 (68%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+NTT+F GGL ++T+E L + F +G+I +KI KG F+++ ++E+A +A+ +L+
Sbjct: 195 TNTTVFCGGLKQDITEEMLHKSFQPHGQIEKIKIFKEKGYAFIKYTSKESACQAIVELHN 254
Query: 114 TVIGKQSVRLSWGRN 128
+ + Q +R SWG++
Sbjct: 255 SNLNGQMIRCSWGKD 269
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 34/142 (23%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT--- 57
+T MN +R MR+ AT GQG +++ +T+
Sbjct: 53 ITMMNDKMLQNRKMRVDWAT-----------------------GQGNKNKYTKVDTSRHH 89
Query: 58 -IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHK 110
++VG L P + ++ LR+ F +GEI+ K+ +G GFV F + +AE ++
Sbjct: 90 HVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISA 149
Query: 111 LNGTVIGKQSVRLSWG-RNPAN 131
+NG +G++ ++ W R PAN
Sbjct: 150 MNGQWLGRKMIKTRWATRKPAN 171
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGTV 115
+VG LD +VT++ + F Q GE+ S K+ P FV+F + A A+ +N +
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALNAITMMNDKM 60
Query: 116 IGKQSVRLSWGRNPANK 132
+ + +R+ W NK
Sbjct: 61 LQNRKMRVDWATGQGNK 77
>gi|119580481|gb|EAW60077.1| RNA binding motif protein 9, isoform CRA_f [Homo sapiens]
Length = 446
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP 88
+++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TTEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII 213
Query: 89 V----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQW 142
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 FNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGW 273
Query: 143 S-----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 KLSPVVGAVYGPELY 288
>gi|426225223|ref|XP_004006766.1| PREDICTED: LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 2
[Ovis aries]
Length = 391
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 92 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 151
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 152 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 211
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 212 LSPVVGAVYGPELY 225
>gi|302837077|ref|XP_002950098.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
gi|300264571|gb|EFJ48766.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
Length = 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANR 101
GD T ++VG L P V +E L+ F ++G IASVK+ G+ CGFV F R
Sbjct: 217 GDPFTTNLYVGNLAPEVDEEVLKIEFGRFGAIASVKVMWPRDEEQRRKGRNCGFVAFMRR 276
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGR 127
++AE A+ KLNG + + + WG+
Sbjct: 277 DDAETAMRKLNGITLHGNELHIGWGK 302
>gi|255073423|ref|XP_002500386.1| predicted protein [Micromonas sp. RCC299]
gi|226515649|gb|ACO61644.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 312
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D S TT++VGG+D VT++ L+ F QYG+I+SV+ K C FV F +R AE+A +
Sbjct: 230 ADESITTLYVGGIDDRVTEDALKDAFYQYGQISSVRTLYAKNCAFVTFVDRAGAEKAAEE 289
Query: 111 L-NGTVIGKQSVRLSWGRNPANK 132
+ I + R+ WG++ K
Sbjct: 290 CGSRKAISGINARIMWGKSKKEK 312
>gi|339247155|ref|XP_003375211.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
gi|316971466|gb|EFV55227.1| Pre-mRNA-splicing factor RBM22 [Trichinella spiralis]
Length = 331
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 52 DSSNTTIFVGGL--DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D + TTI++G + D +T++D++ F Q+GEI S+ I KGCGFVQF RE AE A
Sbjct: 230 DKTITTIYLGNIGDDNVITEDDIKNYFYQFGEIRSIVILSEKGCGFVQFTTREAAELASE 289
Query: 110 KLNGTVIGK-QSVRLSWGR 127
K G ++ K + + + WGR
Sbjct: 290 KTFGKLMIKGRRITVRWGR 308
>gi|345322710|ref|XP_001506233.2| PREDICTED: RNA binding protein fox-1 homolog 2-like
[Ornithorhynchus anatinus]
Length = 448
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 20 TPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPF 76
TP +G Q ++GG ++G Q SE S +T + V + D DLRQ F
Sbjct: 101 TPTTQNGSLPQ--TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMF 158
Query: 77 SQYGEIASVKIPV----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPA 130
Q+G+I V+I KG GFV F N +A+ A KL+GTV+ + + + + R
Sbjct: 159 GQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 218
Query: 131 NKQFRADYGNQWS-----GAYYGGQVY 152
NK+ Y N W GA YG ++Y
Sbjct: 219 NKKMVTPYANGWKLSPVVGAVYGPELY 245
>gi|242021295|ref|XP_002431080.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212516329|gb|EEB18342.1| Heterogeneous nuclear ribonucleoprotein A1, putative, partial
[Pediculus humanus corporis]
Length = 302
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR----KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT 56
+ MNG + SR +R AT + K+ G S Y A +N
Sbjct: 60 IAAMNGRWLGSRSIRTNWATRKPSIIKADGNTLPLSFDEVYKQTSA-----------TNC 108
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T++ GG+ +T+E +++ FS YG I +K+ KG FV+F+ +E+A A+ ++ T I
Sbjct: 109 TVYCGGITNGLTEELVQKHFSPYGTIQEIKVFKDKGYAFVRFSTKESAAHAIVAVHNTEI 168
Query: 117 GKQSVRLSWGR 127
Q+V+ SWG+
Sbjct: 169 NGQTVKCSWGK 179
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L P + + LR F+ +GEI+ ++ KG GFV F + A+ A+ +
Sbjct: 4 IFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAIAAM 63
Query: 112 NGTVIGKQSVRLSWG-RNPA 130
NG +G +S+R +W R P+
Sbjct: 64 NGRWLGSRSIRTNWATRKPS 83
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 20/139 (14%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ TP SG +S GGY AP + + ++VGGLDP VT+
Sbjct: 54 NTNPIPTAITTPM--SGNMVSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTE 103
Query: 70 EDLRQPFSQYGEIASVKI--------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
+ L+Q F G + SVKI G GFV+F + AE A+ LNG I + +
Sbjct: 104 DILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERAMQTLNGRRIHQSEI 163
Query: 122 RLSWG--RNPANKQFRADY 138
R++W N ANK+ +++
Sbjct: 164 RVNWAYQSNTANKEDTSNH 182
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 159 HQSEIRVNWAYQSNTA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 213
Query: 87 IPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F R +AE+AL ++G +G +++R +W
Sbjct: 214 VMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNW 258
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+T M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 241 LTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT +VG L P T D+ F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQADRGFAFIKMDTHENAASA 360
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +LNG + + ++ SWG++ P QF
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKDRPPTGQF 388
>gi|358254799|dbj|GAA56358.1| nucleolysin TIA-1 isoform p40 [Clonorchis sinensis]
Length = 508
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+SNTTI+VGG+ +T+ L+ F ++GEI ++I KG F++F + A A+ ++
Sbjct: 138 ASNTTIYVGGITSGLTELLLQNAFQEFGEIKEIRIFKEKGFSFIRFDSHAAATRAIVTMH 197
Query: 113 GTVIGKQSVRLSWGRNPA 130
G ++G QS + SWG+ P
Sbjct: 198 GRLVGDQSCKCSWGKEPT 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFV 96
P Q + + IFVG L P++ + L F+ +G + KI KG GFV
Sbjct: 23 PSSANQELSNDDSFHIFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFV 82
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANK 132
+ +RE AE A+ +NG ++G +++R +W R+PA++
Sbjct: 83 AYKSREEAERAIQVMNGQILGSRAIRTNWAVRRDPADQ 120
>gi|449481859|ref|XP_004175959.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 2
[Taeniopygia guttata]
Length = 383
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 92 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 151
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 152 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 211
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 212 LSPVVGAVYGPELY 225
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + R +R AT + G Q++ S Y Q+ GD NT+++V
Sbjct: 233 IEQMNGQWLGRRTIRTNWAT--RKPGDQEKPSH---YNEKSYDEIYNQTSGD--NTSVYV 285
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
G + ++T++++RQ F+ +G I V+I +G FV+F N++ A +A+ ++N +G Q
Sbjct: 286 GNI-ASLTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQL 344
Query: 121 VRLSWGR 127
VR SWG+
Sbjct: 345 VRCSWGK 351
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFV 96
PGQ + + +FVG L V ++ LR+ F +G+++ K+ KG GFV
Sbjct: 162 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 221
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQVYD 153
+ RE AE A+ ++NG +G++++R +W R P G+Q ++Y + YD
Sbjct: 222 SYPKREEAERAIEQMNGQWLGRRTIRTNWATRKP---------GDQEKPSHYNEKSYD 270
>gi|149066044|gb|EDM15917.1| RNA binding motif protein 9 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 317
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 7 VYCSSRPM-RIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT---IFVGG 62
+Y SS+P + +P +G Q ++GG ++G Q SE S +T + V
Sbjct: 61 LYGSSQPHGEQSSNSPSNQNGSLTQ--TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSN 118
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVG----KGCGFVQFANRENAEEALHKLNGTVIGK 118
+ D DLRQ F Q+G+I V+I KG GFV F N +A+ A KL+GTV+
Sbjct: 119 IPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEG 178
Query: 119 QSVRL--SWGRNPANKQFRADYGNQWS-----GAYYGGQVY 152
+ + + + R NK+ Y N W GA YG ++Y
Sbjct: 179 RKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELY 219
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|18461363|gb|AAL71902.1|AF229055_1 hexaribonucleotide binding protein 2 [Mus musculus]
Length = 377
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|380811212|gb|AFE77481.1| RNA binding protein fox-1 homolog 2 isoform 3 [Macaca mulatta]
Length = 377
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|119580482|gb|EAW60078.1| RNA binding motif protein 9, isoform CRA_g [Homo sapiens]
Length = 372
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 81 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 140
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 141 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 200
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 201 LSPVVGAVYGPELY 214
>gi|440904028|gb|ELR54599.1| RNA-binding protein 9, partial [Bos grunniens mutus]
Length = 369
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 78 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 137
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 138 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 197
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 198 LSPVVGAVYGPELY 211
>gi|118380139|ref|XP_001023234.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila]
gi|89305001|gb|EAS02989.1| hypothetical protein TTHERM_00494500 [Tetrahymena thermophila
SB210]
Length = 376
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D + T++++G + P+ T++D Q F +YG I S+KI K C FV F R+ AEEA+
Sbjct: 241 ADPTITSLYIGNITPDFTEQDFHQIFVKYGPIQSIKIISQKSCAFVNFIARKAAEEAIKD 300
Query: 111 L--NGTVIGKQSVRLSWGRNPANKQFRADY 138
L N V G Q + +SW R N+Q ++++
Sbjct: 301 LYGNFNVKGIQ-LSISWSRAGKNQQQQSEF 329
>gi|449481863|ref|XP_004175961.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 4
[Taeniopygia guttata]
Length = 357
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 66 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 125
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 126 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 185
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 186 LSPVVGAVYGPELY 199
>gi|161016818|ref|NP_001104300.1| RNA binding protein fox-1 homolog 2 isoform 6 [Mus musculus]
gi|14495356|gb|AAK64287.1|AF387322_1 putative RNA-binding protein fxh [Mus musculus]
gi|56122420|gb|AAV74334.1| Fxh variant 1 [Mus musculus]
gi|116283393|gb|AAH02124.1| Rbm9 protein [Mus musculus]
gi|148697685|gb|EDL29632.1| RNA binding motif protein 9, isoform CRA_a [Mus musculus]
Length = 377
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|348569214|ref|XP_003470393.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Cavia
porcellus]
Length = 374
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 83 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 142
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 143 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 202
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 203 LSPVVGAVYGPELY 216
>gi|354498763|ref|XP_003511483.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Cricetulus
griseus]
gi|344256440|gb|EGW12544.1| RNA-binding protein 9 [Cricetulus griseus]
Length = 377
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|149066045|gb|EDM15918.1| RNA binding motif protein 9 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 377
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|390458790|ref|XP_002743769.2| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 1
[Callithrix jacchus]
Length = 446
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 156 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 215
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 216 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 275
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 276 LSPVVGAVYGPELY 289
>gi|110665622|gb|ABG81457.1| RNA binding motif protein 9 [Bos taurus]
Length = 284
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 104 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 163
Query: 90 G----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 164 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 223
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 224 LSPVVGAVYGPELY 237
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-GYASNGAPGQGPQS------EGDS 53
+ ++NG + SR +R AT S+G QQ S+ +N G + E +
Sbjct: 208 INDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNP 267
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANRENAEEALHKL 111
T++VG L VT + L + F G I V+I +GKG GFV+++N A A+
Sbjct: 268 QYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAALAIQMG 327
Query: 112 NGTVIGKQSVRLSWGRNPA 130
NG ++G + ++ SWG P
Sbjct: 328 NGRILGGKPIKCSWGNKPT 346
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E + + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 142 QREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQ 201
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWG 126
++A+ A++ LNG +G + +R +W
Sbjct: 202 QDAQSAINDLNGQWLGSRQIRCNWA 226
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + VT+ LR+ F G + K+ + GFV + +R +A ++
Sbjct: 62 STCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALSILT 121
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSG 144
LNG I Q +R++W ++ D+ N + G
Sbjct: 122 LNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVG 155
>gi|334347999|ref|XP_001375901.2| PREDICTED: RNA binding protein fox-1 homolog 2-like [Monodelphis
domestica]
Length = 395
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 104 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 163
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 164 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 223
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 224 LSPVVGAVYGPELY 237
>gi|120586965|ref|NP_001073364.1| RNA binding protein fox-1 homolog 2 [Rattus norvegicus]
gi|166918685|sp|A1A5R1.1|RFOX2_RAT RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName: Full=RNA-binding motif
protein 9; AltName: Full=RNA-binding protein 9
gi|118764384|gb|AAI28767.1| RNA binding motif protein 9 [Rattus norvegicus]
Length = 432
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 137 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 196
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 197 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 256
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 257 LSPVVGAVYGPELY 270
>gi|133925803|ref|NP_001076047.1| RNA binding protein fox-1 homolog 2 isoform 5 [Homo sapiens]
gi|387763023|ref|NP_001248445.1| RNA binding protein, fox-1 homolog (C. elegans) 2 [Macaca mulatta]
gi|110590032|gb|ABG77459.1| unknown [Homo sapiens]
gi|380784301|gb|AFE64026.1| RNA binding protein fox-1 homolog 2 isoform 5 [Macaca mulatta]
gi|384946142|gb|AFI36676.1| RNA binding protein fox-1 homolog 2 isoform 5 [Macaca mulatta]
gi|384946146|gb|AFI36678.1| RNA binding protein fox-1 homolog 2 isoform 5 [Macaca mulatta]
Length = 451
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 156 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 215
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 216 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 275
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 276 LSPVVGAVYGPELY 289
>gi|431905230|gb|ELK10275.1| RNA-binding protein 9 [Pteropus alecto]
Length = 552
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 261 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 320
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 321 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 380
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 381 LSPVVGAVYGPELY 394
>gi|380811210|gb|AFE77480.1| RNA binding protein fox-1 homolog 2 isoform 5 [Macaca mulatta]
gi|384946144|gb|AFI36677.1| RNA binding protein fox-1 homolog 2 isoform 5 [Macaca mulatta]
Length = 447
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 156 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 215
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 216 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 275
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 276 LSPVVGAVYGPELY 289
>gi|449481861|ref|XP_004175960.1| PREDICTED: RNA binding protein fox-1 homolog 2-like isoform 3
[Taeniopygia guttata]
Length = 373
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 82 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 141
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 142 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 201
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 202 LSPVVGAVYGPELY 215
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 136 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 190
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 191 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 250
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 251 VKCYWGKETLDMINPVQQQNQIGYPPTYGQW-GQWYG 286
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 62 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 121
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 122 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 158
>gi|449270363|gb|EMC81046.1| RNA-binding protein 9, partial [Columba livia]
Length = 369
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 78 TEGGAQTDGQQSQTQNSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 137
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 138 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 197
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 198 LSPVVGAVYGPELY 211
>gi|410971262|ref|XP_003992089.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein [Felis
catus]
Length = 1015
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 22 RKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE 81
R+S + + G + APG GD S T +++G ++P + +E L Q F ++G
Sbjct: 242 RRSMDAPSRRNRSSGVLDDYAPGS--HDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGP 299
Query: 82 IASVKI---------PVGKGCGFVQFANRENAEEALHKLNG-TVIGKQSVRLSWGR 127
+ASVKI + CGFV F NR +AE AL LNG +I ++L WG+
Sbjct: 300 LASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKKMIMSFEMKLGWGK 355
>gi|406878247|gb|EKD27207.1| hypothetical protein ACD_79C00808G0004 [uncultured bacterium]
Length = 86
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+ ++VGGL + T E L+ FS+YGE+ +VKI GKG GF++ + + +AE A +LNG +
Sbjct: 4 SKLYVGGLRYSTTVEKLKNLFSEYGEVKNVKIVGGKGIGFIEMSKQSDAESAKKELNGYI 63
Query: 116 IGKQSVRLSWGRNPANKQ 133
Q +R+ R P K+
Sbjct: 64 FDGQEIRVDVPRPPKKKR 81
>gi|355563624|gb|EHH20186.1| hypothetical protein EGK_02987, partial [Macaca mulatta]
gi|355784944|gb|EHH65795.1| hypothetical protein EGM_02634, partial [Macaca fascicularis]
Length = 389
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 94 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 153
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 154 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 213
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 214 LSPVVGAVYGPELY 227
>gi|148697687|gb|EDL29634.1| RNA binding motif protein 9, isoform CRA_c [Mus musculus]
Length = 317
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 86 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 145
Query: 90 G----KGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 146 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 205
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 206 LSPVVGAVYGPELY 219
>gi|301791994|ref|XP_002930965.1| PREDICTED: RNA-binding protein 9-like, partial [Ailuropoda
melanoleuca]
Length = 293
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 2 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 61
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 62 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 121
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 122 LSPVVGAVYGPELY 135
>gi|363727918|ref|XP_416291.3| PREDICTED: RNA binding protein fox-1 homolog 2 [Gallus gallus]
Length = 388
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 97 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 156
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 157 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 216
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 217 LSPVVGAVYGPELY 230
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAITAMNGQWIGSRSIRTNW 170
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 54 SNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL-HKL 111
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+ H
Sbjct: 220 TNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTH 279
Query: 112 NGTVIGKQSVRLSWGR 127
N V G Q V+ WG+
Sbjct: 280 NSEVHGNQ-VKCFWGK 294
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++ + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + + ++++W +P N+
Sbjct: 63 TAMNKRLFLDKEIKVNWATSPGNQ 86
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNTPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +NG IG +++R +W
Sbjct: 141 VSFVKKAEAENAIQSMNGQWIGSRNIRTNW 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNV-TDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DE + + F Q+G I V++ KG F++F +E A A+ +
Sbjct: 222 TNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTH 281
Query: 113 GTVIGKQSVRLSWGR 127
+ + V+ WG+
Sbjct: 282 NSEVHGNHVKCFWGK 296
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L F + G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+N V + ++++W +P N
Sbjct: 63 TAMNKRVFLDKEIKVNWATSPGN 85
>gi|395538420|ref|XP_003771177.1| PREDICTED: RNA binding protein fox-1 homolog 2 [Sarcophilus
harrisii]
Length = 392
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 101 TEGGAQTDGQQSQTQSSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 160
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 161 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 220
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 221 LSPVVGAVYGPELY 234
>gi|281354508|gb|EFB30092.1| hypothetical protein PANDA_021625 [Ailuropoda melanoleuca]
Length = 212
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 2 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 61
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 62 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 121
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 122 LSPVVGAVYGPELY 135
>gi|355715843|gb|AES05420.1| RNA binding motif protein 9 [Mustela putorius furo]
Length = 388
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 94 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 153
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 154 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 213
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 214 LSPVVGAVYGPELY 227
>gi|161016807|ref|NP_444334.3| RNA binding protein fox-1 homolog 2 isoform 1 [Mus musculus]
gi|166918880|sp|Q8BP71.2|RFOX2_MOUSE RecName: Full=RNA binding protein fox-1 homolog 2; AltName:
Full=Fox-1 homolog B; AltName: Full=Fox-1 homolog Fxh;
AltName: Full=Hexaribonucleotide-binding protein 2;
AltName: Full=RNA-binding motif protein 9; AltName:
Full=RNA-binding protein 9
Length = 449
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 213
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 273
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 LSPVVGAVYGPELY 287
>gi|148666752|gb|EDK99168.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_b
[Mus musculus]
Length = 293
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 71 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 125
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 126 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 185
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 186 VKCYWGKETLDMINPVQQQNQIGYPPTYGQW-GQWYG 221
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
KG GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 54 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 93
>gi|30524922|ref|NP_780596.1| RNA binding protein fox-1 homolog 2 isoform 2 [Mus musculus]
gi|20073191|gb|AAH27263.1| RNA binding motif protein 9 [Mus musculus]
gi|148697686|gb|EDL29633.1| RNA binding motif protein 9, isoform CRA_b [Mus musculus]
Length = 435
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 213
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 273
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 LSPVVGAVYGPELY 287
>gi|149066043|gb|EDM15916.1| RNA binding motif protein 9 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 435
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 213
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 273
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 LSPVVGAVYGPELY 287
>gi|26346468|dbj|BAC36885.1| unnamed protein product [Mus musculus]
Length = 449
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 213
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 273
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 LSPVVGAVYGPELY 287
>gi|358340385|dbj|GAA34086.2| pre-mRNA-splicing factor RBM22/SLT11 [Clonorchis sinensis]
Length = 534
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++G + VT+ DLR F Q+GEI SV + + C F+QF R++AE+A +
Sbjct: 244 DRTITTLYIGSIPDEVTERDLRNHFYQFGEIRSVNLHPRQHCAFIQFTTRQSAEKAAERS 303
Query: 111 LNGTVIGKQSVRLSWGRNP 129
++G + ++WG++P
Sbjct: 304 YERLILGGHRLTVNWGKSP 322
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPPTYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S + + ++ SN T++
Sbjct: 164 IAQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESN----TKQLTYEEVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANK-------QFRADYGNQWSGAYYGG 149
V+ WG+ NP + F YG QW G +YGG
Sbjct: 279 VKCYWGKETPDMLNPVQQVSEASQISFPPPYG-QW-GQWYGG 318
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A +L +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYC-FVEFFEHRHAAASLAAM 66
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRAD 137
NG I + V+++W P++++ A+
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDAN 92
>gi|161016811|ref|NP_001104297.1| RNA binding protein fox-1 homolog 2 isoform 3 [Mus musculus]
Length = 445
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 154 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 213
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 214 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 273
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 274 LSPVVGAVYGPELY 287
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 155 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 209
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 269
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 270 VKCYWGKETLDMINPVQQQNQIGYPPTYGQW-GQWYG 305
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 81 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 140
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 141 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 177
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAE 105
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKIMGKEVKVNWATTPSSQK 90
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 163 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 217
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 218 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 277
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 278 VKCYWGKETLDMINPVQQQNQIGYPPTYGQW-GQWYG 313
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 89 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 148
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 149 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 185
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAE 105
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A
Sbjct: 11 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAA 70
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 71 AALAAMNGRKIMGKEVKVNWATTPSSQK 98
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ +N T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPNNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPPTYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|351711255|gb|EHB14174.1| RNA-binding protein 9, partial [Heterocephalus glaber]
Length = 384
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 93 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 152
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 153 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 212
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 213 LSPVVGAVYGPELY 226
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
MNG + +R +R AT P+ + Y G +S S+N T+
Sbjct: 147 MNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSS-------------STNCTV 193
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ G L T+E L++ F YG+I +++ KG F++FA++E+A +A+ ++ T +
Sbjct: 194 YCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFIRFASKESATQAIVSVHNTDLNG 253
Query: 119 QSVRLSWGRNP 129
Q+V+ SWG+ P
Sbjct: 254 QNVKCSWGKEP 264
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 29/133 (21%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MN C R M++ AT +PG P+ + S + IFVG L
Sbjct: 56 MNKRNCMGREMKVNWAT---------------------SPGNAPKQD-TSKHFHIFVGDL 93
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGTVIG 117
P + LR F+ +GEI+ ++ KG GFV F + +AE A+ +NG +G
Sbjct: 94 SPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLG 153
Query: 118 KQSVRLSWG-RNP 129
+++R +W R P
Sbjct: 154 TRAIRTNWATRKP 166
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGTV 115
+VG LDP+VT+E + F Q G + KI P + FV+FA +A AL +N
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHEPYCFVEFAEHHSAAAALAAMNKRN 60
Query: 116 IGKQSVRLSWGRNPAN 131
+ ++++W +P N
Sbjct: 61 CMGREMKVNWATSPGN 76
>gi|350582294|ref|XP_003481239.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Sus scrofa]
Length = 220
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
++ SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+
Sbjct: 41 NQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAI 100
Query: 109 HKLNGTVIGKQSVRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
+NGT I V+ WG+ NP +Q + Y QW G +YG
Sbjct: 101 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 148
>gi|62529140|gb|AAX84842.1| RNA binding motif protein 9 [Mus musculus]
Length = 427
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 136 TEGGAQTDGQQSQTQSSENSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 195
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 196 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 255
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 256 LSPVVGAVYGPELY 269
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + + +N P + SS N T++ G
Sbjct: 116 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANAKPLTFDEVYNQSSPTNCTVYCG 166
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
GL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++ T I Q+V
Sbjct: 167 GLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTV 226
Query: 122 RLSWGR---NPANKQ 133
+ SWG+ +P N Q
Sbjct: 227 KCSWGKESGDPNNAQ 241
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEE 106
S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE
Sbjct: 52 SEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAES 111
Query: 107 ALHKLNGTVIGKQSVRLSWG-RNP 129
A+ +NG +G +S+R +W R P
Sbjct: 112 AIGAMNGQWLGSRSIRTNWATRKP 135
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQG---PQSEGDSSN-- 55
+ ++NG + +R +R AT ++G ++Q SNG+ G P +G +N
Sbjct: 218 INDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNEDGPENNPQ 277
Query: 56 -TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
TT++VG L T D+ F G I V++ KG GFV+++ E A A+ N
Sbjct: 278 FTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN 337
Query: 113 GTVIGKQSVRLSWGRNPA 130
G +IG + ++ SWG P
Sbjct: 338 GQLIGGRQIKCSWGSKPT 355
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S + IFVG L P VTD L FS Y + ++ +G GFV F N+++
Sbjct: 154 EDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQD 213
Query: 104 AEEALHKLNGTVIGKQSVRLSWGRNPAN 131
A+ A++ LNG +G + +R +W AN
Sbjct: 214 AQSAINDLNGKWLGNRQIRCNWATKGAN 241
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--GCGFVQFANRENAEEALHK 110
S+ +++VG + VTD L++ F G + K+ + GF+ + +R A A+
Sbjct: 72 STCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRYAALAILS 131
Query: 111 LNGTVIGKQSVRLSW 125
LNG + Q ++++W
Sbjct: 132 LNGRQLYGQPIKVNW 146
>gi|146422214|ref|XP_001487048.1| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS 54
+TE NG+ SR +R+G A P + + + +S P S D +
Sbjct: 240 LTEANGMVVGSRAIRVGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFS--DPT 297
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N TI V GL VT+E+L S +GEI + G+V+F NR++AE A+ + G
Sbjct: 298 NNTIVVHGLSGKVTEEELALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQ 357
Query: 115 VIGKQSVRLSWG 126
+I +++SWG
Sbjct: 358 IINDCRIQVSWG 369
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 17 GAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPF 76
G+ P S ++ +S+G + ++ +++ +IFVG L +V++ L + F
Sbjct: 145 GSPIPNSSKHFKLNIASRGKNTATDIQ----RNSKPANDFSIFVGDLAMDVSEPILYEAF 200
Query: 77 SQY--GEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+ ++ VKI + KG GFV+F + +AL + NG V+G +++R+
Sbjct: 201 NSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQAKALTEANGMVVGSRAIRV 255
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Query: 127 RNPANKQ 133
N ANK+
Sbjct: 171 SNSANKE 177
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E SS+ IFVG L V DE L Q FS +G ++ +
Sbjct: 159 HQSEIRVNWAYQSNSA-----NKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEAR 213
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F R +AE+AL+ ++G +G +++R +W
Sbjct: 214 VMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNW 258
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 241 LNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 395
>gi|327272461|ref|XP_003221003.1| PREDICTED: RNA binding protein fox-1 homolog 2-like [Anolis
carolinensis]
Length = 452
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 33 SQGGYASNGAPGQGPQSEGDSSNTT---IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV 89
++GG ++G Q SE S +T + V + D DLRQ F Q+G+I V+I
Sbjct: 157 TEGGAQTDGQQSQTQNSENTESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 216
Query: 90 ----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS 143
KG GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W
Sbjct: 217 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKMVTPYANGWK 276
Query: 144 -----GAYYGGQVY 152
GA YG ++Y
Sbjct: 277 LSPVVGAVYGPELY 290
>gi|195995479|ref|XP_002107608.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
gi|190588384|gb|EDV28406.1| hypothetical protein TRIADDRAFT_51296 [Trichoplax adhaerens]
Length = 828
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG G GD + T ++VG L+P++ ++ L + F +YG +ASVKI + C
Sbjct: 188 PGYGSYDTGDPNTTNLYVGNLNPSIDEDYLCKLFGEYGALASVKIMWPRTDEEKKRNRNC 247
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
GFV F R + ++AL LNG I + + + WG+
Sbjct: 248 GFVAFMTRTDGDKALRALNGKEIMEYELHVGWGK 281
>gi|355724189|gb|AES08142.1| TIA1 cytotoxic granule-associated RNA binding protein [Mustela
putorius furo]
Length = 261
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 40 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 94
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 95 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 154
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 155 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 190
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
KG GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 23 KGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 62
>gi|380023603|ref|XP_003695607.1| PREDICTED: nucleolin-like [Apis florea]
Length = 360
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + + +N P + SS N T++ G
Sbjct: 94 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANAKPLTFDEVYNQSSPTNCTVYCG 144
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
GL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++ T I Q+V
Sbjct: 145 GLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTV 204
Query: 122 RLSWGR---NPANKQ 133
+ SWG+ +P N Q
Sbjct: 205 KCSWGKESGDPNNAQ 219
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRAD 137
KG GFV F + AE A+ +NG +G +S+R +W R P + A+
Sbjct: 74 KGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEAN 121
>gi|190344618|gb|EDK36327.2| hypothetical protein PGUG_00425 [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAAT------PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS 54
+TE NG+ SR +R+G A P + + + +S P S D +
Sbjct: 240 LTEANGMVVGSRAIRVGMAAGSNKPQPVTNIVHSDRLASPAIEEEVKLPKHARFS--DPT 297
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N TI V GL VT+E+L S +GEI + G+V+F NR++AE A+ + G
Sbjct: 298 NNTIVVHGLSGKVTEEELALHLSSFGEILYCTLSSDFDSGYVKFYNRQDAETAIFFMYGQ 357
Query: 115 VIGKQSVRLSWG 126
+I +++SWG
Sbjct: 358 IINDCRIQVSWG 369
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPV------GKGCGFVQFANRENA 104
+++ +IFVG L +V++ L + F+ ++ VKI + KG GFV+F +
Sbjct: 177 ANDFSIFVGDLAMDVSEPILYEAFNSLFPDQVKQVKIMMDNSTRASKGFGFVRFFDANTQ 236
Query: 105 EEALHKLNGTVIGKQSVRL 123
+AL + NG V+G +++R+
Sbjct: 237 AKALTEANGMVVGSRAIRV 255
>gi|115468728|ref|NP_001057963.1| Os06g0589700 [Oryza sativa Japonica Group]
gi|113596003|dbj|BAF19877.1| Os06g0589700 [Oryza sativa Japonica Group]
Length = 399
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 14 MRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLR 73
M + A +K S Q + ++ + N Q +++ LD ++ DE LR
Sbjct: 37 MVLYVARAQKKSERQAELKAKFEHDKN-------QKFEKLQTVNLYLKNLDDDINDEHLR 89
Query: 74 QPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-R 127
+ F +GE+AS K+ + KGCGFV FA E+A A+ K+NG ++GK+ + ++ R
Sbjct: 90 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 149
Query: 128 NPANKQFRADY 138
K F A +
Sbjct: 150 KEERKAFLAAH 160
>gi|443697641|gb|ELT98008.1| hypothetical protein CAPTEDRAFT_123077 [Capitella teleta]
Length = 416
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 52 DSSNTTIFVGGL-DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D S T++VG L + +T+ DLR F Q+GE+ +V + + + C F+QF R AEEA+ K
Sbjct: 231 DKSVCTLYVGNLGEDEITETDLRNYFYQFGELRAVSLVIRQQCAFIQFTTRAAAEEAVEK 290
Query: 111 -LNGTVIGKQSVRLSWGRNP 129
N V+ + + + WG++P
Sbjct: 291 TFNKLVMHGRRLNIKWGKSP 310
>gi|440803975|gb|ELR24858.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 1 MTEMNGVYCSS---RPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTT 57
+ E+ ++ R R P K+ Q + + S P G GD T
Sbjct: 124 IDELKDMFIKEQQKRDERFSGVAPEKAK--QLERLERLKELSESLPPLGSHDSGDPYTTN 181
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFANRENAEEAL 108
++VG + P +E LR+ F +YG I SVKI + GFVQF RE+AE A
Sbjct: 182 LYVGNVSPQANEELLRKEFGKYGNIYSVKIMWPRTDDEKRRNRNSGFVQFEKREDAERAK 241
Query: 109 HKLNGTVIGKQSVRLSWGR 127
LNG + +R+ WG+
Sbjct: 242 DALNGVELMGYELRIGWGK 260
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTDI-SSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWG 126
V F + AE A+ +NG IG +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNGQWIGSRSIRTNWS 171
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A+ +
Sbjct: 197 TNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTH 256
Query: 113 GTVIGKQSVRLSWGR 127
+ + V+ WG+
Sbjct: 257 NSEVHGNLVKCFWGK 271
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAASTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 111
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RN 128
F G + SVKI K GFV++ + AE A+ LNG + + +R++W N
Sbjct: 112 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSN 171
Query: 129 PANKQFRADY 138
ANK+ +++
Sbjct: 172 NANKEDTSNH 181
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 158 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 212
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F R +AE+AL ++G +G +++R +W
Sbjct: 213 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNW 257
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 240 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 299
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 300 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 359
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF DY Q
Sbjct: 360 ICQLNGYNVNGRPLKCSWGKDRPPTGQF--DYSPQ 392
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 12/106 (11%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ ++++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 114 TVIGKQSVRLSWGR------NPANK----QFRADYGNQWSGAYYGG 149
T I V+ WG+ NP + F YG QW G +YGG
Sbjct: 272 TTIEGHVVKCYWGKETPDMLNPVQQASQISFPPPYG-QW-GQWYGG 315
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P ++ +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A +L +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYC-FVEFFEHRHAAASLAAI 66
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRAD 137
NG I + V+++W P++++ A+
Sbjct: 67 NGRKILGKEVKVNWATTPSSQKKDAN 92
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQSQIGYPQPYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + + +N P + SS N T++ G
Sbjct: 121 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANTKPLTFDEVYNQSSPTNCTVYCG 171
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
GL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++ T I Q+V
Sbjct: 172 GLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDINGQTV 231
Query: 122 RLSWGR---NPANKQ 133
+ SWG+ +P N Q
Sbjct: 232 KCSWGKESGDPNNAQ 246
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRE 102
S S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F +
Sbjct: 53 SVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVKKA 112
Query: 103 NAEEALHKLNGTVIGKQSVRLSWG-RNP 129
AE A+ +NG +G +S+R +W R P
Sbjct: 113 EAESAIGAMNGQWLGSRSIRTNWATRKP 140
>gi|256084514|ref|XP_002578473.1| hypothetical protein [Schistosoma mansoni]
gi|353229225|emb|CCD75396.1| hypothetical protein Smp_161730 [Schistosoma mansoni]
Length = 1232
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
+GD + T +F+G L+P +T++ L + F +YG +ASVKI G+ CGFV F N
Sbjct: 218 DGDRTTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMN 277
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRN 128
R++ E AL + G + ++L WG++
Sbjct: 278 RKDGERALDNIRGKELMGFEMKLGWGKS 305
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQG---PQSEGDSSN-- 55
+ ++NG + +R +R AT ++G ++Q SNG+ G P +G +N
Sbjct: 218 INDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDGPENNPQ 277
Query: 56 -TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
TT++VG L T D+ F G I V++ KG GFV+++ E A A+ N
Sbjct: 278 FTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGN 337
Query: 113 GTVIGKQSVRLSWGRNPA 130
G +IG + ++ SWG P
Sbjct: 338 GQLIGGRQIKCSWGSKPT 355
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S + IFVG L P VTD L FS Y + ++ +G GFV F N+++
Sbjct: 154 EDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQD 213
Query: 104 AEEALHKLNGTVIGKQSVRLSWGRNPAN 131
A+ A++ LNG +G + +R +W AN
Sbjct: 214 AQSAINDLNGKWLGNRQIRCNWATKGAN 241
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANR 101
G P S+ +++VG + VTD L++ F G + K+ + GF+ + +R
Sbjct: 63 GNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDR 122
Query: 102 ENAEEALHKLNGTVIGKQSVRLSW 125
A A+ LNG + Q ++++W
Sbjct: 123 RYAALAILSLNGRQLYGQPIKVNW 146
>gi|401404962|ref|XP_003881931.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
gi|325116345|emb|CBZ51898.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
Length = 894
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
PG P S+T +++G L P +T+E L Q F +YG I SVKI + C
Sbjct: 168 PGAPPVDLEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNC 227
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
GFV F +R AE A H L+G +R+ WG++
Sbjct: 228 GFVSFESRPQAEAAKHNLDGVAFYGMVIRIGWGKS 262
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|241710461|ref|XP_002403460.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215505106|gb|EEC14600.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 566
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D S TT++VG L +T++DLR F QYGEI + + C FVQF +R +AE A K
Sbjct: 228 DGSITTLYVGNLGERLTEKDLRDHFYQYGEIRQITMLARHQCAFVQFTSRTSAELAADKT 287
Query: 111 LNGTVIGKQSVRLSWGR 127
N ++ + + + WGR
Sbjct: 288 FNKLILAGRRLVIKWGR 304
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQSQIGYPQPYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 155 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 209
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 269
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 270 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 305
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 159 GGQWLGGRQIRTNWATRKP 177
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 113
+VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +NG
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAAALAAMNG 59
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 60 RKIMGKEVKVNWATTPSSQK 79
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTK 179
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG NV E+L Q FSQ+G+I V++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSVRLSWGR 127
T I +V+ WG+
Sbjct: 266 NTEISGHTVKCFWGK 280
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LD +VT+E L F Q GE+ KI P F++F N +A
Sbjct: 2 GDESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAAT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V ++ ++++W +P N Q + D N
Sbjct: 62 ALAAMNRRVFLEKEMKVNWATSPGN-QPKTDTSNH 95
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 46 GPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 98
GPQ + D+S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F
Sbjct: 84 GPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSF 143
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
+ AE A+ +NG +G +S+R +W R P
Sbjct: 144 LKKAEAESAIAAMNGQWLGSRSIRTNWATRKP 175
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTI 58
+ MNG + SR +R AT RK + SN P + SS N T+
Sbjct: 153 IAAMNGQWLGSRSIRTNWAT-RKPPTLKTD--------SNTKPLTFDEVYNQSSPTNCTV 203
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ GGL +TDE +++ F+ +G I +++ KG FV+FA +E+A A+ ++ + I
Sbjct: 204 YCGGLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIVAVHNSDING 263
Query: 119 QSVRLSWGR 127
Q V+ SWG+
Sbjct: 264 QPVKCSWGK 272
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 314
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 131 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 185
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 186 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 245
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 246 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 281
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 75 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 134
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 135 GGQWLGGRQIRTNWATRKP 153
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQAYGQW-GQWYG 314
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 90 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 149
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 150 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 113
+VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +NG
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAAALAAMNG 79
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 80 RKIMGKEVKVNWATTPSSQK 99
>gi|384487960|gb|EIE80140.1| hypothetical protein RO3G_04845 [Rhizopus delemar RA 99-880]
Length = 292
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGFVQFAN 100
+GDS +T ++VG + P VT+ L F ++G IASVKI G+ GFV F N
Sbjct: 194 DGDSHSTNLYVGNIHPTVTEMGLCHEFGKFGPIASVKIMWPRTLEEKEKGRNNGFVCFMN 253
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPA 130
RE+A EA+ LNG + +R+ WG+ A
Sbjct: 254 REDAAEAIKGLNGIELEGFKLRVGWGKAVA 283
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 166 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 220
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 221 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 280
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 281 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 316
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 110 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 169
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 170 GGQWLGGRQIRTNWATRKP 188
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG------FVQFANRENAE 105
D T++VG L +VT+ + Q FSQ G + K+ + FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAA 62
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 63 AALAAMNGRKIMGKEVKVNWATTPSSQK 90
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 155 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 209
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 210 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 269
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 270 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 305
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 159 GGQWLGGRQIRTNWATRKP 177
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 113
+VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +NG
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAAALAAMNG 59
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 60 RKIMGKEVKVNWATTPSSQK 79
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|357629028|gb|EHJ78065.1| putative RNA binding motif protein 22 [Danaus plexippus]
Length = 405
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++G L N+T+E+LR F QYGEI S+ + C FVQ+ R AE A K
Sbjct: 228 DRTVTTLYIGNLPENITEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEKT 287
Query: 111 LNGTVIGKQSVRLSWGRN 128
N VI + + + WG++
Sbjct: 288 FNRLVIAGRRLAIKWGKS 305
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS--NTTIFVG 61
MNG + SR +R AT RK + SN P + SS N T++ G
Sbjct: 123 MNGQWLGSRSIRTNWAT-RKPPTLKTD--------SNTKPLTFDEVYNQSSPTNCTVYCG 173
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
GL +TDE +++ F+ +G I +++ KG FV+FA +E+A A+ ++ + I Q V
Sbjct: 174 GLTSGLTDELVQKTFAPFGNIQEIRVFKDKGYAFVRFATKESATHAIVAVHNSDINGQPV 233
Query: 122 RLSWGRN 128
+ SWG+
Sbjct: 234 KCSWGKE 240
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAE 105
S + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F + AE
Sbjct: 58 KSEHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAE 117
Query: 106 EALHKLNGTVIGKQSVRLSWG-RNP 129
A+ +NG +G +S+R +W R P
Sbjct: 118 SAIAAMNGQWLGSRSIRTNWATRKP 142
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ N T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPGNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 268 VKCYWGKETLDMINPVQQQNQIGYPPAYGQW-GQWYG 303
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAF 141
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
V F + AE A+ +NG +G +S+R +W R P
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP 176
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 32/139 (23%)
Query: 4 MNGVYCSSRPMRIGAAT-----PR---------KSSGYQQQYSSQGGYASNGAPGQGPQS 49
MNG + SR +R +T PR K+ G+++ Y++ G
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTG-------------- 202
Query: 50 EGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
+NTT++ GG PN ++D ++ F Q+G I V++ KG F++F ++E A A+
Sbjct: 203 ---PTNTTVYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKDKGYAFIKFISKEAAARAI 259
Query: 109 HKLNGTVIGKQSVRLSWGR 127
+ + + V+ WG+
Sbjct: 260 EGTHNSEVQGHPVKCYWGK 278
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 113
T++VG LD +VT++ L F Q G + S KI F+++A+ ++A+ AL +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTALAAMNK 68
Query: 114 TVIGKQSVRLSWGRNPANK 132
+ K+ ++++W +P N+
Sbjct: 69 RLFLKKEIKVNWATSPGNQ 87
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 314
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 211 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 270
Query: 114 TVIGKQSVRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
T I V+ WG+ NP +Q + Y QW G +YG
Sbjct: 271 TTIEGHVVKCYWGKETLDMLNPVQQQNQIGYPQAYGQW-GQWYG 313
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 167 GGQWLGGRQIRTNWATRKP 185
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
++VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +
Sbjct: 7 VMYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAAALAAM 65
Query: 112 NGTVIGKQSVRLSWGRNPANKQ 133
NG I + V+++W P++++
Sbjct: 66 NGRKIMGKEVKVNWATTPSSQK 87
>gi|332226897|ref|XP_003262629.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Nomascus leucogenys]
Length = 411
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 237 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 296
Query: 114 TVIGKQSVRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
T I V+ WG+ NP +Q + Y QW G +YG
Sbjct: 297 TTIEGHVVKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 339
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+FVG L P +T ED++ F+ +G I+S + + ++F++ EN A+ ++ G +G
Sbjct: 145 VFVGDLSPEITTEDIKAAFAPFGRISSNQFYMN---AIIKFSDAEN---AIQQMGGQWLG 198
Query: 118 KQSVRLSWG-RNP 129
+ +R +W R P
Sbjct: 199 GRQIRTNWATRKP 211
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 40 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 98
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 99 ALAAMNGRKIMGKEVKVNWATTPSSQK 125
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S S+ N T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VSQSSPGNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPPAYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETLDMINPVQQQNQIGYPQPYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F + +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYC-FVEFHDDRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG + V+++W P++++
Sbjct: 62 ALAAMNGRKKMGKEVKVNWATTPSSQK 88
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 16/131 (12%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTT 57
MNG + SR +R +T PR +S G S PG + + +NTT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRDNSK---------GIKSGKTPGFEEIYNNTSPTNTT 207
Query: 58 IFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
++ GG PN +TDE +++ F+Q+G+I ++ KG F++FAN+E+A A+ + + +
Sbjct: 208 VYCGGFPPNTITDELIQKHFAQFGQIHDTRVFKDKGYAFIRFANKESAARAIEGTHNSEV 267
Query: 117 GKQSVRLSWGR 127
V+ WG+
Sbjct: 268 QGHPVKCYWGK 278
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
V F + AE A+ +NG +G +S+R +W R P
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP 176
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD +VT+E L FSQ G + S KI F+++A+ +A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTALAAMNK 68
Query: 114 TVIGKQSVRLSWGRNPANK 132
K+ ++++W +P N+
Sbjct: 69 RFFLKKEIKVNWATSPGNQ 87
>gi|307181926|gb|EFN69366.1| Nucleolysin TIA-1 isoform p40 [Camponotus floridanus]
Length = 323
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
+N T++ GGL +T+E +++ FS +G I +++ KG F++F+ +E+A A+ ++
Sbjct: 37 TNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKDKGYAFIRFSTKESATHAIVAVHN 96
Query: 114 TVIGKQSVRLSWGR---NPANKQ 133
T I Q+V+ SWG+ +P N Q
Sbjct: 97 TDINGQTVKCSWGKESGDPNNAQ 119
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNAKQLSY----DDVVNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR------NPANKQFRADYG---NQWSGAYYG 148
V+ WG+ NP +Q + Y QW G +YG
Sbjct: 279 VKCYWGKETPDMINPIQQQNQVGYPPPYGQW-GQWYG 314
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 184 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 243
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 244 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 303
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
NG +IG + ++ SWG P
Sbjct: 304 GNGQLIGGRQIKCSWGSKPT 323
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E S + IFVG L P VTD L F+ + + ++ +G GFV F N+
Sbjct: 118 QREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQ 177
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
++A+ A+++LNG +G + VR +W AN
Sbjct: 178 QDAQNAINELNGKWLGNRQVRCNWATKGAN 207
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + VTD L + F G + K+ + GFV + +R +A A+
Sbjct: 38 STCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAIVS 97
Query: 111 LNGTVIGKQSVRLSW 125
LNG + Q ++++W
Sbjct: 98 LNGRQLFGQPIKVNW 112
>gi|290561328|gb|ADD38066.1| Pre-mRNA-splicing factor RBM22 [Lepeophtheirus salmonis]
Length = 362
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
++ D TT++VGGLD + ++D+ F QYGEI ++ + +GC FVQF+ R +AE A
Sbjct: 212 ETPEDPLITTLYVGGLDDVLDEKDISSHFYQYGEIRNITLVPKQGCAFVQFSKRSSAELA 271
Query: 108 LHK-LNGTVIGKQSVRLSWGR 127
K N VI + + + WG+
Sbjct: 272 AEKTFNNLVIHGRKIIVRWGK 292
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F + E+A+
Sbjct: 187 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 246
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ--FRADYG---NQWSGAYYGGQVY 152
AL LNG +G + + ++ + A ++ R + N+ Y G VY
Sbjct: 247 ALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVY 297
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEEALHKLN 112
+FV L ++ + L+ F ++G I S K+ V KG GFVQF + E A A+ KLN
Sbjct: 102 VFVKNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLN 161
Query: 113 GTVI-GKQ 119
G +I GKQ
Sbjct: 162 GFIIDGKQ 169
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI----PVGKGC--GFVQFANRENAEEALHK 110
+++VG L P++TD L FS++ +ASV+I G+ G+V F + ++A A+
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 111 LNGTVIGKQSVRLSWG-RNPANKQFRADYGNQW 142
N T++ + +R+ W R+P + R+ GN +
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDAR--RSGIGNVF 103
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 222 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 281
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 282 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 341
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
NG +IG + ++ SWG P
Sbjct: 342 GNGQLIGGRQIKCSWGSKPT 361
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E S + IFVG L P VTD L F+ + + ++ +G GFV F N+
Sbjct: 156 QREDTSGHFNIFVGDLCPEVTDAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQ 215
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
++A+ A+++LNG +G + VR +W AN
Sbjct: 216 QDAQNAINELNGKWLGNRQVRCNWATKGAN 245
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + VTD L + F G + K+ + GFV + +R +A A+
Sbjct: 76 STCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDRRSAAIAIVS 135
Query: 111 LNGTVIGKQSVRLSW 125
LNG + Q ++++W
Sbjct: 136 LNGRQLFGQPIKVNW 150
>gi|4680340|gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 172 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 231
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 232 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 291
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
NG +IG + ++ SWG P
Sbjct: 292 GNGQLIGGRQIKCSWGSKPT 311
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+G GFV F N+++A+ A+++LNG +G + VR +W AN
Sbjct: 155 RGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGAN 195
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG SS GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPSSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 127 -RNPANKQFRADY 138
N NK+ +++
Sbjct: 171 QSNNTNKEDTSNH 183
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL ++G +G +++R +W
Sbjct: 238 AEKALSSMDGEWLGSRAIRCNW 259
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGMQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P + DL F +G + ++ +G F++ + ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQADRGFAFIKMDSHENAAMA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +LNG + + ++ SWG++ P QF
Sbjct: 362 ICQLNGYNVNGRPLKCSWGKDRPPTGQF 389
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 226 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 285
Query: 114 TVIGKQSVRLSWGR------NPANKQFRADYGN---QWSGAYYG 148
T I V+ WG+ NP +Q + Y QW G +YG
Sbjct: 286 TTIEGHVVKCYWGKETLDMLNPVQQQNQIGYPQAYGQW-GQWYG 328
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 122 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 181
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 182 GGQWLGGRQIRTNWATRKP 200
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 113
+VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +NG
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAAALAAMNG 82
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 83 RKIMGKEVKVNWATTPSSQK 102
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L++ FS +G ++ ++ +G GF+
Sbjct: 96 QGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLA 155
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWG 126
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 156 FRDKTDAEQAIATMNGEWLGSRAIRVNWA 184
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 15/146 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ------------ 48
+ MNG + SR +R+ A + + + G P
Sbjct: 166 IATMNGEWLGSRAIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQGGPISYE 225
Query: 49 ---SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAE 105
S+ + N+T++VG L P T DL F G + +++ +G FV+ E+A
Sbjct: 226 SVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQADRGFAFVKLDTHEHAA 285
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPAN 131
A+ +L G ++ + ++ SWG++ A+
Sbjct: 286 MAIIQLQGQMVHGRPIKCSWGKDRAD 311
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFV 96
G G +E ++VG L P VT+ L + F+ G + VKI G GFV
Sbjct: 5 GIGGVAEAPQRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFV 64
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG 126
++ + AE AL LNG I +R++W
Sbjct: 65 EYIDMRAAETALQTLNGRKIFDTEIRVNWA 94
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 51 NTNPIPTAVTSPMGENGGMMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 102
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
+ LRQ F G + +VKI K GFV++ + AE A+ LNG + + +R++
Sbjct: 103 DVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPAAAERAMQTLNGRRVHQAEIRVN 162
Query: 125 WG--RNPANKQFRADY 138
W N +NK+ +++
Sbjct: 163 WAYQSNTSNKEDTSNH 178
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R++
Sbjct: 173 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQD 232
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL ++G +G +++R +W
Sbjct: 233 AEKALSSMDGEWLGSRAIRCNW 254
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G S P G QS
Sbjct: 237 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHHHFPTHGVQSYDMI 296
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ + TT++VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 297 VQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 356
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRAD 137
+ +L+G + + ++ SWG++ A Q AD
Sbjct: 357 ICQLSGYNVNGRPLKCSWGKDKAPGQPGAD 386
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-------SEGDS 53
+ MNG + +RP+R AT Q G + AP G Q + +
Sbjct: 175 IATMNGEWLGTRPIRCNWAT-------------QKGQTAMPAPQPGQQLPYEVVVQQTPA 221
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
T+I+VG + NV+ DL QPF ++G + VK +G FV+ ENA A+ L
Sbjct: 222 YVTSIYVGNIPLNVSQNDLVQPFQRFGYVQEVKFQADRGFAFVKMDTHENAANAIVHLQN 281
Query: 114 TVIGKQSVRLSWGRN 128
I +LSWG++
Sbjct: 282 MSINGNVTKLSWGKD 296
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--------GCGFVQFAN 100
+E + TTI+VG LD VTD L + F+ G++ SVKI + GFV+FA+
Sbjct: 11 AETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFAD 70
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
AE+A+ +NG I +R +W + AN
Sbjct: 71 PRVAEQAIQDMNGRKIFNYEIRANWAQPSAN 101
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 38 ASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVG---K 91
++N P E +++ +FVG L + DE L Q FS++G ++ + P+ +
Sbjct: 99 SANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSR 158
Query: 92 GCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG 126
G GFV F ++ +AE A+ +NG +G + +R +W
Sbjct: 159 GFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWA 193
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 111
Query: 76 FSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-- 126
F G + SVKI G GFV++ + AE A+ LNG + + +R++W
Sbjct: 112 FETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 171
Query: 127 RNPANKQFRADY 138
N ANK+ +++
Sbjct: 172 SNNANKEDTSNH 183
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 160 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 214
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F R +AE+AL ++G +G +++R +W
Sbjct: 215 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNW 259
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF DY Q
Sbjct: 362 ICQLNGYNVNGRPLKCSWGKDRPPTGQF--DYSPQ 394
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSS-NTTIFVGGLDPNVT 68
SS + +G R G + + N A G Q++ D+S + IFVG L P++
Sbjct: 47 SSAALALGTMNKRTCFGREMKV--------NWATSPGTQTKQDTSKHHHIFVGDLSPDIE 98
Query: 69 DEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
LR+ F +G I+ KI KG GFV + R+ AE A++ +NG IG +++R
Sbjct: 99 TPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIR 158
Query: 123 LSWG-RNPA 130
+W R PA
Sbjct: 159 TNWAIRKPA 167
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MNG + SR +R A + ++ ++ ++Q P +N T++
Sbjct: 144 INSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSP------TNCTVYC 197
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +R F ++G+I +++ KG F+++ +E A EA+ K++ T +G +
Sbjct: 198 GGILSGLTEDLVRSAFGEHGKIEEIRVFKDKGYAFIRYNTKEAATEAIVKMHQTEVGGHT 257
Query: 121 VRLSWGRNPANKQFRADYGNQWSGAYYGGQV 151
V+ SWG+ +K AD Q G G QV
Sbjct: 258 VKCSWGKE--SKDSPADPNGQ--GQMVGSQV 284
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNGTV 115
+VG LDP VT++ L F G KI G FV+F+ +A AL +N
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETGNEPYAFVEFSEHSSAALALGTMNKRT 60
Query: 116 IGKQSVRLSWGRNP 129
+ ++++W +P
Sbjct: 61 CFGREMKVNWATSP 74
>gi|312373605|gb|EFR21316.1| hypothetical protein AND_17232 [Anopheles darlingi]
Length = 1091
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP---------VGKGCGFV 96
G GD + T +++G L+P ++++ L + F +YG +AS+KI G+ CGFV
Sbjct: 149 GSFDNGDPNTTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEEKMRGRNCGFV 208
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRN 128
+ +R +AE AL LNG + ++L WG++
Sbjct: 209 AYMSRRDAERALRALNGRDVMGYEMKLGWGKS 240
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P +K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSK 179
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ-----SEGDSSNTTI 58
MNG + SR +R +T + S ++G +S A + P ++ +NTT+
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPSK-----PNEGAPSSKRA--KQPTFDEVYNQSSPTNTTV 209
Query: 59 FVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIG 117
+ GG NV EDL Q FSQ+G+I V++ KG F++F +E A A+ + T I
Sbjct: 210 YCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEIS 269
Query: 118 KQSVRLSWGR 127
V+ WG+
Sbjct: 270 GHIVKCFWGK 279
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LD +VT+ + F Q GE+ KI P F++F + A
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAAT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|196010826|ref|XP_002115277.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
gi|190582048|gb|EDV22122.1| hypothetical protein TRIADDRAFT_64182 [Trichoplax adhaerens]
Length = 432
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEI 82
KSS Q + G + Q +G ++ IF+GGL P +++++LR FS +GE+
Sbjct: 284 KSSRSNQHHKEDGQSQRSNNFRNSSQRDGQQTDYQIFIGGLTPEISEKELRNEFSVFGEV 343
Query: 83 ASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+K KG GFV F N E+ + AL +GK + +
Sbjct: 344 KHIKTNTSKGFGFVSFENEESVKRALTTELKIFVGKTQINI 384
>gi|294659018|ref|XP_461354.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
gi|202953554|emb|CAG89760.2| DEHA2F23276p [Debaryomyces hansenii CBS767]
Length = 477
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAA--TPRKSSGYQQQYSSQGGYASN---GAPGQGPQSEGDSSN 55
+ EMNG SRP+R+G A + + G S+ ASN P + D +N
Sbjct: 260 LNEMNGTIAGSRPIRVGMAAGSSNNAVGQDTFSKSETPVASNVHIAQPQPSLNAHTDPNN 319
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTI + GL ++++L F +G+I K+ G +++ R +AE AL ++G++
Sbjct: 320 TTIIIKGLSSKFSEDELCSYFIAFGDIVYCKLSSDFNSGIIKYFLRSSAESALLFMHGSI 379
Query: 116 IGKQSVRLSWGR 127
V ++WG+
Sbjct: 380 ANDCRVVVNWGK 391
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQY--GEIASVKI------PVGKGCGFVQFANRENAEEAL 108
+IFVG L +VT+ L + F++ ++ KI + KG GFV+F+ ++AL
Sbjct: 201 SIFVGDLGSDVTEPMLFECFNKVYPNQVKQAKIMFDPVTKLSKGFGFVRFSTSFTQQKAL 260
Query: 109 HKLNGTVIGKQSVRL 123
+++NGT+ G + +R+
Sbjct: 261 NEMNGTIAGSRPIRV 275
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY-QQQYSSQGG------YASNGAPGQGPQSEGDS 53
++ M+G + SR +R A + + QQQ +Q G Y + P QG QS
Sbjct: 233 LSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHTFPTQGSQSYEMV 292
Query: 54 SN------TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
N TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 293 VNQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFVKMDTHENAANA 352
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRA-DYGNQWSGAYYGGQVYDGYGYAIPP---- 161
+ +L+G + + ++ SWG++ P QF + A VY G A P
Sbjct: 353 ICQLSGYNVNGRPLKCSWGKDRPPTGQFDGYNPAQTPQSAVPQSAVYPGPPQAFFPQYGQ 412
Query: 162 PNDPSM--YAAAAAAYGAYPVYGSHQQQVS 189
P+ P+M AA +G +P+ GS Q +S
Sbjct: 413 PSAPAMSPQAATPGQFGQHPLPGSFQSTMS 442
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+S GG+ AP + + ++VGGLDP VT++ L+Q F G + +VKI K
Sbjct: 67 TSAGGHVRRAAP--------EPNKRALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIPDK 118
Query: 92 GC-------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQW 142
GFV++ + AE A+ LNG + +Q +R++W +N + D N +
Sbjct: 119 NFQSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQ-SNTNTKEDTSNHF 175
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+QQ+ Y SN E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 151 HQQEIRVNWAYQSNTN-----TKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEAR 205
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGN 140
+ +G GFV + +R AE+AL ++G +G +++R +W AN++ + +
Sbjct: 206 VMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNW----ANQKGQPSFSQ 261
Query: 141 QWSGAYYGGQVYDGYGY 157
Q + A G YG+
Sbjct: 262 QQAMAQMGMTPTTPYGH 278
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS--NGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G NG+ G ++ E +
Sbjct: 220 INELNGKWLGNRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPENN 279
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L ++ D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 280 PQYTTVYVGNLPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 339
Query: 111 LNGTVIGKQSVRLSWGRNP 129
NG ++G + ++ SWG P
Sbjct: 340 GNGQLVGGRQIKCSWGSKP 358
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 154 QREDTSGHFNIFVGDLCPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQ 213
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
++A+ A+++LNG +G + +R +W AN
Sbjct: 214 QDAQTAINELNGKWLGNRQIRCNWATKGAN 243
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK--GCGFVQFANR 101
G P S+ +++VG + VTD L + F G + K+ + GFV + +R
Sbjct: 65 GNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVDYYDR 124
Query: 102 ENAEEALHKLNGTVIGKQSVRLSW 125
+A A+ LNG + Q ++++W
Sbjct: 125 RSAALAIVSLNGRQLFGQPIKVNW 148
>gi|281208502|gb|EFA82678.1| hypothetical protein PPL_04372 [Polysphondylium pallidum PN500]
Length = 918
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
+S + I++G + N+ ++++R+ +YGEI SV+I K C FV F N NA AL L
Sbjct: 683 NSLSRAIYIGNVSDNLPEKEIRKECEKYGEIESVRILRKKACAFVNFMNIPNATVALQAL 742
Query: 112 NGTVIGKQSVRLSWGR 127
NG +G VR+++G+
Sbjct: 743 NGKKLGDTIVRVNYGK 758
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 44 GQGPQSEGDSS---NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFAN 100
G P EG+S + ++VG + +V++E+L+ F YGE+ SV+I + C FV F +
Sbjct: 573 GVDPIMEGNSDEQPSRILWVGNIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFKD 632
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWGRNPANKQF-----------RADYGNQWSGAYYGG 149
NA A ++ V+G Q + +++ +++ F + N S A Y G
Sbjct: 633 AINAANAKRNMHNQVLGSQFIVVNFRHPKSDEMFPNGTTGTTLITTPETLNSLSRAIYIG 692
Query: 150 QVYDGY 155
V D
Sbjct: 693 NVSDNL 698
>gi|213403836|ref|XP_002172690.1| U1 snRNP-associated protein Usp109 [Schizosaccharomyces japonicus
yFS275]
gi|212000737|gb|EEB06397.1| U1 snRNP-associated protein Usp109 [Schizosaccharomyces japonicus
yFS275]
Length = 350
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D +NTT+FV GL V +EDLR F GEI V++ GK V FA R AE + ++
Sbjct: 172 DPNNTTVFVDGLADTVKEEDLRSYFQHLGEIVHVQLLNGKAN--VIFAQRYPAERCILEM 229
Query: 112 NGTVIGKQSVRLSWGRNPA 130
+G +I ++L WGR P
Sbjct: 230 HGALIKNSRIQLQWGRPPT 248
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 17/132 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ LRQ
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 111
Query: 76 FSQYGEIASVKI-------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-- 126
F G + SVKI G GFV++ + AE A+ LNG + + +R++W
Sbjct: 112 FETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQ 171
Query: 127 RNPANKQFRADY 138
N ANK+ +++
Sbjct: 172 SNNANKEDTSNH 183
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 160 HQSEIRVNWAYQSNNA-----NKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEAR 214
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F R +AE+AL ++G +G +++R +W
Sbjct: 215 VMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNW 259
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 16/155 (10%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF DY Q
Sbjct: 362 ICQLNGYNVNGRPLKCSWGKDRPPTGQF--DYSPQ 394
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 15/109 (13%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ ++++ +RQ FS +G+I V++ KG FV+F++ E+A A+ +NG
Sbjct: 212 SNCTVYCGGVTSGLSEQLMRQTFSPFGQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNG 271
Query: 114 TVIGKQSVRLSWGR------NPANK-------QFRADYGNQWSGAYYGG 149
T I V+ WG+ NP + F YG QW G +YGG
Sbjct: 272 TTIEGHVVKCYWGKETPDMLNPVQQVSEASQISFPPPYG-QW-GQWYGG 318
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P ++ +D++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEISTDDIKAAFAPFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKL 111
T++VG L +VT+ + Q FSQ G S K+ + C FV+F +A +L +
Sbjct: 8 TLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYC-FVEFFEHRHAAASLAAI 66
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRAD 137
NG I + V+++W P++++ A+
Sbjct: 67 NGRKILGKEVKVNWATTPSSQKKDAN 92
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 51 NTNPIPTAITSPMGENGGVMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 102
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
E LRQ F G + +VKI K GFV++ + AE A+ LNG + + +R++
Sbjct: 103 EVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVN 162
Query: 125 WG--RNPANKQFRADY 138
W N +NK+ +++
Sbjct: 163 WAYQSNTSNKEDTSNH 178
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GF F R++
Sbjct: 173 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQD 232
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL ++G +G +++R +W
Sbjct: 233 AEKALSSMDGEWLGSRAIRCNW 254
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G + + P G QS
Sbjct: 237 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMI 296
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T +DL F +G + + +G FV+ + ENA A
Sbjct: 297 VQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQADRGFAFVKMDSHENAALA 356
Query: 108 LHKLNGTVIGKQSVRLSWGRNPA 130
+ +L+G + + ++ SWG++ A
Sbjct: 357 ICQLSGYNVNGRPLKCSWGKDKA 379
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP +T++ LRQ
Sbjct: 55 IPTAISSPMSGSVMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRITEDVLRQI 106
Query: 76 FSQYGEIASVKI--------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
F G + SVKI G GFV++ + AE A+ LNG + + +R++W
Sbjct: 107 FETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSEIRVNWAY 166
Query: 128 NPANKQFRADYGNQW 142
+N Q + D N +
Sbjct: 167 Q-SNNQPKEDTSNHF 180
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+Q + Y SN P E S++ IFVG L V DE L Q FS +G+++ +
Sbjct: 156 HQSEIRVNWAYQSNNQP-----KEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEAR 210
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
+ +G GFV F +R +AE+AL ++G +G +++R +W
Sbjct: 211 VMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNW 255
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR--KSSGYQQQYSSQGG-----YASNGAPGQGPQSEGDS 53
++ M+G + SR +R A + S QQ +S G Y + P G QS
Sbjct: 238 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMV 297
Query: 54 SN------TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
N TT +VG L P T DL F +G + + +G F++ ENA A
Sbjct: 298 VNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMA 357
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +LNG + + ++ SWG++ P QF
Sbjct: 358 ICQLNGYNVNGRPLKCSWGKDRPPTGQF 385
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+S GG+ AP + + ++VGGLDP VTD+ LRQ F G + SVKI K
Sbjct: 62 TSAGGFVRRAAP--------EPNKRALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDK 113
Query: 92 GC-----GFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
GFV++ + AE A+ LNG + + +R++W
Sbjct: 114 NAKGFNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNW 152
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQ +Q G + + P G QS
Sbjct: 226 LSAMDGEWLGSRAIRCNWANQKGQPSISQQSQMAQMGMTPTTPFGHHHFPTHGIQSYDMI 285
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT++VG L P T DL F +G I + +G F++ ENA A
Sbjct: 286 VQQTPQWQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQADRGFAFIKMDTHENAAMA 345
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +L+G + + ++ SWG++ P QF
Sbjct: 346 ICQLSGYNVNGRPLKCSWGKDRPPTGQF 373
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S + IFVG L V DE L+Q F+ +G I+ ++ +G GFV + R +
Sbjct: 162 EDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEARVMWDMKTGRSRGYGFVAYRERSD 221
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL ++G +G +++R +W
Sbjct: 222 AEKALSAMDGEWLGSRAIRCNW 243
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA-----------SNGAPGQGPQS 49
+ EMNG + SRP+R AT KS+G Q+ + G + P Q
Sbjct: 198 INEMNGKWLGSRPIRCNWAT--KSTGSQEDVPTPGPVSVPEQVAVVQVQMKQEPNHDEQH 255
Query: 50 E-------GDSSN---TTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQ 97
E G +N TT++VG L VT +L + F G I V++ KG GFV+
Sbjct: 256 EDGAMQLDGPENNPQFTTVYVGNLAHEVTQTELHRQFHALGVGVIEDVRVQKEKGFGFVR 315
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSWGRNP 129
+ E A A+ NG VI +SV+ SWG P
Sbjct: 316 YRTHEEAAYAIQAANGRVICGKSVKCSWGSKP 347
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E + + IFVG L P VTD L F Y + ++ +G GFV F ++
Sbjct: 132 QREDTTGHYNIFVGDLSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSK 191
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
+ AE A++++NG +G + +R +W Q
Sbjct: 192 QEAERAINEMNGKWLGSRPIRCNWATKSTGSQ 223
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 28/127 (22%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
+S +++VG + VT+ L + F+ G + K+ + GFV + + +A A+
Sbjct: 52 TSCRSVYVGNIHIKVTEALLAEVFATVGPLEGCKLIKKEKSSYGFVDYFDHRSAAAAIIT 111
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGY-------AIPPPN 163
LNG +I QS++++W AY GQ D G+ P
Sbjct: 112 LNGKLIFGQSIKVNW-------------------AYASGQREDTTGHYNIFVGDLSPEVT 152
Query: 164 DPSMYAA 170
D ++YAA
Sbjct: 153 DATLYAA 159
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + E LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
FV F + AE A+ +NG +G +S+R +W R P
Sbjct: 139 YAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKP 176
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTI 58
MNG + SR +R +T P+ Q+ N + +N T+
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTFDEVYN---------QSSPTNCTV 207
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ GG +T++ +++ FSQ+G I +++ KG F++FA +E+A A+ ++ T I
Sbjct: 208 YCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKDKGYAFIKFATKESATHAIETIHNTEING 267
Query: 119 QSVRLSWGR 127
Q V+ WG+
Sbjct: 268 QMVKCFWGK 276
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LDP+V+++ L FSQ G + KI P FV+F N ++A AL
Sbjct: 4 ESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTAL 63
Query: 109 HKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
+N + + ++++W +P N Q + D N
Sbjct: 64 AAMNKRLFLDKEMKVNWATSPGN-QPKQDTSNH 95
>gi|241671849|ref|XP_002411428.1| RSZp21 protein, putative [Ixodes scapularis]
gi|215504077|gb|EEC13571.1| RSZp21 protein, putative [Ixodes scapularis]
Length = 222
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG-KGCGFVQFANRENAEEALHKLNGTVI 116
IFVGGLD +T EDL + F +YG++ V + G FV+F + +EA+ ++NGT++
Sbjct: 21 IFVGGLDCIMTREDLEREFGKYGQLKEVWMAQNPPGFAFVEFEDNSRVDEAVREMNGTIV 80
Query: 117 GKQSVRLSWGRNPANKQF-RADYGNQWSGAYYGGQVYDGYG-------------YAIPPP 162
+R+ R+ A + R + + G G VY G+G +A P
Sbjct: 81 NGALLRVERARDKARTRTPRGGGASSFRGRMRRGAVYQGFGAERKTRRAPAEVDFACPVQ 140
Query: 163 NDPSMYAAAAAAYGAY 178
P Y +A Y AY
Sbjct: 141 QTPMSYGDYSAGYSAY 156
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQG-GYASNGAPGQGPQS------EGDS 53
+ ++NG + SR +R AT S+G QQ S+ +N G + E +
Sbjct: 208 INDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDVPENNP 267
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANRENAEEALHKL 111
T++VG L VT + L + F G I V+I +GKG GFV++++ A A+
Sbjct: 268 QYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSHTEAALAIQMG 327
Query: 112 NGTVIGKQSVRLSWGRNPA 130
NG ++G + ++ SWG P
Sbjct: 328 NGRILGGKPIKCSWGNKPT 346
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E + + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 142 QREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQ 201
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWG 126
++A+ A++ LNG +G + +R +W
Sbjct: 202 QDAQSAINDLNGQWLGSRQIRCNWA 226
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + VT+ LR+ F G + K+ + GFV + +R +A A+
Sbjct: 62 STCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALAILT 121
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSG 144
LNG I Q +R++W ++ D+ N + G
Sbjct: 122 LNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVG 155
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP-----VGKGCGFVQFANRENAEE 106
D+ T +++ LDP+VT+E LR+ F ++G+IAS+ I + +G GFV F + E+A+
Sbjct: 207 DAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKR 266
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ--FRADYG---NQWSGAYYGGQVY 152
AL LNG +G + + ++ + A ++ R + N+ Y G VY
Sbjct: 267 ALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVY 317
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----C-GFVQFANRENAEEALHK 110
+++VG L P++TD L FS++ +ASV+I C G+V F + ++A A+
Sbjct: 13 SLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIEA 72
Query: 111 LNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAY 146
N T++ + +R+ W R+P + R+ GN + Y
Sbjct: 73 KNHTMLHGKVIRVMWSHRDPDAR--RSGIGNVFVKVY 107
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-----GKGCGFVQFANRENAEE 106
D+ + L ++ + L+ F ++G I S K+ V KG GFVQF + E A
Sbjct: 116 DAELYFLVCLNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANA 175
Query: 107 ALHKLNGTVI-GKQ 119
A+ KLNG +I GKQ
Sbjct: 176 AIEKLNGFIIDGKQ 189
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Query: 127 RNPANKQ 133
N NK+
Sbjct: 171 SNSTNKE 177
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E SS+ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 177 EDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERAD 236
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL+ ++G +G +++R +W
Sbjct: 237 AEKALNAMDGEWLGSRAIRCNW 258
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 241 LNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 395
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 13/111 (11%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
S+ SN T++ GG+ +T++ +RQ FS +G+I +++ KG F++F + E+A A+
Sbjct: 207 SQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPDKGYSFIRFNSHESAAHAI 266
Query: 109 HKLNGTVIGKQSVRLSWGR------NPANKQ-----FRADYGNQWSGAYYG 148
+NGT I V+ WG+ NP +Q + YG QW G +YG
Sbjct: 267 VSVNGTTIEGHVVKCYWGKETLDMINPVQQQQNQIGYPPAYG-QW-GQWYG 315
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATH 265
Query: 113 GTVIGKQSVRLSWGR 127
T I +V+ WG+
Sbjct: 266 NTEISGHTVKCFWGK 280
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGNQWSGAYYGGQV 151
FV F + AE A+ +NG +G +S+R +W R P RA+ NQ +V
Sbjct: 139 YAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPP--RAEKPNQSKKQITFDEV 196
Query: 152 YD 153
Y+
Sbjct: 197 YN 198
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 4 MNGVYCSSRPMRIGAAT-----PR--KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT 56
MNG + SR +R +T PR K + ++Q + Y ++ +NT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPPPRAEKPNQSKKQITFDEVY-----------NQTSPTNT 205
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
T++ GG +TD+ + + FS++G I +++ KG F++F ++E+A A+ ++ T I
Sbjct: 206 TVYCGGFASGLTDDLVTKTFSRFGAIQDIRVFKDKGYAFIKFVSKESATHAIENIHNTEI 265
Query: 117 GKQSVRLSWGR 127
+V+ WG+
Sbjct: 266 NGHTVKCFWGK 276
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNG 113
T++VG LD +V ++ L FSQ G + KI P FV+F N ++A AL +N
Sbjct: 9 TLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTALIAMNK 68
Query: 114 TVIGKQSVRLSWGRNPANKQFRADYGNQ 141
V + ++++W +P N Q + D N
Sbjct: 69 RVFLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|326431240|gb|EGD76810.1| pre-mRNA-splicing factor RBM22 [Salpingoeca sp. ATCC 50818]
Length = 336
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 52 DSSNTTIFVGGL--DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D + TT++VGGL D + + D+R F Q+GEI + I K FV++ RE AE A+
Sbjct: 122 DKTITTLYVGGLREDYGINETDIRDVFYQHGEIQRITITPNKKNAFVEYTTREAAERAMS 181
Query: 110 KL-NGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMY 168
+L N I +RL WGR A++ + G Q G AIP P D
Sbjct: 182 ELHNSLCIKGHYLRLLWGRPKASQHGK---GPQDPTTAPAVPKVPGLPGAIPLPAD---L 235
Query: 169 AAAAAAYGAYPV 180
AA+ A G P+
Sbjct: 236 AASKAVAGTVPL 247
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC-------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAYQ 170
Query: 127 RNPANKQFRADY 138
N NK+ +++
Sbjct: 171 SNSTNKEDTSNH 182
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 241 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 301 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 360
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 395
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 236
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL ++G +G +++R +W
Sbjct: 237 ADKALSSMDGEWLGSRAIRCNW 258
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATH 265
Query: 113 GTVIGKQSVRLSWGR 127
T I +V+ WG+
Sbjct: 266 NTEISGHTVKCFWGK 280
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ S + IFVG L P + E LR+ F+ +GEI++ +I +G F
Sbjct: 83 SPGNQPKTD-TSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAF 141
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
V F + AE A+ +NG +G +S+R +W R P
Sbjct: 142 VSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKP 176
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 113
T++VG LD +VT++ L F Q G + S KI F+++AN ++A+ AL +N
Sbjct: 9 TLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQTALAAMNK 68
Query: 114 TVIGKQSVRLSWGRNPANK 132
+ K+ ++++W +P N+
Sbjct: 69 RLFLKKEIKVNWATSPGNQ 87
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T RK ++ G S PG + + +NTT++ GG
Sbjct: 157 MNGQWLGSRSIRTNWST-RKPPAPRENIK---GIKSGKTPGFEEIYNNTGPTNTTVYCGG 212
Query: 63 LDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
N + D + + F +G+I V++ KG F++F N+E+A A+ + + I +V
Sbjct: 213 FPANAINDMLIHKHFGLFGQIQDVRVFKDKGYAFIKFNNKESAARAIEGTHNSEIQGYAV 272
Query: 122 RLSWGR 127
+ WG+
Sbjct: 273 KCYWGK 278
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 47 PQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFAN 100
P S + + IFVG L P + + LR+ F+ +GEI+ ++ KG GFV F
Sbjct: 42 PSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIK 101
Query: 101 RENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
+ AE A++ +NG +G +S+R +W R P
Sbjct: 102 KAEAESAINAMNGQWLGSRSIRTNWATRKP 131
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTIFVG 61
MNG + SR +R AT RK + + +N P + ++ ++N T++ G
Sbjct: 112 MNGQWLGSRSIRTNWAT-RKPPAPKSE--------ANSKPMSFDEIYNQSSATNCTVYCG 162
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
G+ + ++ L++ F YG I +++ KG F++F+ +E+A A+ ++ + IG Q+V
Sbjct: 163 GITNGLCEDLLQKTFLPYGIIQEIRVFKEKGYAFIRFSTKESATHAIVGVHNSEIGGQTV 222
Query: 122 RLSWGR-----NPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
+ SWG+ N A +A Q+ YG Q+ GY Y P + AAAA
Sbjct: 223 KCSWGKESGDPNNAPAASQALTSTQYPYGAYGQQL--GYWY-------PQSFPTAAAA 271
>gi|118344182|ref|NP_001071914.1| zinc finger protein [Ciona intestinalis]
gi|92081514|dbj|BAE93304.1| zinc finger protein [Ciona intestinalis]
Length = 413
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D + TT+++GGL V +EDLR F YGEI S+ + + FVQF R +AE A +
Sbjct: 231 DQTITTLYIGGLGEAVNEEDLRDQFYHYGEIRSIHMATNQNYAFVQFTKRSDAETAAKRT 290
Query: 112 NGTVIGK-QSVRLSWGRNPANKQFRADYGNQWSGAYY 147
G ++ K + + + WG++ + + D G++ S + Y
Sbjct: 291 AGRLMIKGKRIVVRWGKSQGSIKKGGDKGDKSSHSSY 327
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSVRLSWGR 127
T I +V+ WG+
Sbjct: 266 NTEISGHTVKCFWGK 280
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I + KG FV+F+ E+A A+ +NGT
Sbjct: 220 NCTVYCGGIASGLTDQLMRQTFSPFGQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGT 279
Query: 115 VIGKQSVRLSWGRNP--ANKQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ K F + +Y QWS Y Q Y Y G+ +P
Sbjct: 280 TIEGHVVKCYWGKETPDTTKDFQQVEYSQWGQWSQVYGNPQQYGQYVTNGWQVP 333
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 97 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGY 156
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 157 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 193
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI--------PVGKGCG------- 94
E D T++VG L +VT+ + Q FSQ G S K+ V G
Sbjct: 2 EDDGQPKTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 61
Query: 95 ------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 106
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---PG-QGPQSEGDSSN- 55
+TEM G + SR +R AT + Q+ + +NG+ PG + Q G N
Sbjct: 216 ITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENP 275
Query: 56 ------TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEA 107
TT++VG L V ++L + F G I V++ KG GFV+++N A A
Sbjct: 276 ENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALA 335
Query: 108 LHKLNGTVIGKQSVRLSWGRNPA 130
+ NG V+ + ++ SWG P
Sbjct: 336 IQMANGLVVRGKPIKCSWGNKPT 358
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E S + IFVG L V D L FS Y + ++ +G GFV F N+
Sbjct: 150 QREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 209
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWG-RNPANKQFRADYGN 140
+ AE A+ ++ G +G + +R +W +N A ++ D N
Sbjct: 210 QEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHN 249
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + PNVT+ L + F G + K+ + GFV + +R +A A+
Sbjct: 70 STCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMT 129
Query: 111 LNGTVIGKQSVRLSW 125
L+G I Q+++++W
Sbjct: 130 LHGRHICGQAIKVNW 144
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSVRLSWGR 127
T I +V+ WG+
Sbjct: 266 NTEISGHTVKCFWGK 280
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F Q G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---- 87
+S GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 75 TSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDK 126
Query: 88 ---PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
G GFV+F + AE A+ LNG I + +R++W
Sbjct: 127 NFTTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 167
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 177 EDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAE 236
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL+ ++G +G +++R +W
Sbjct: 237 ADKALNSMDGEWLGSRAIRCNW 258
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
+ M+G + SR +R A + QQ + + + P G QS
Sbjct: 241 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMV 300
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G FV+ + ENA A
Sbjct: 301 AQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASA 360
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +LNG + + ++ SWG++ P QF
Sbjct: 361 ICQLNGYNVNGRPLKCSWGKDRPPTGQF 388
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIA------SVKIPVGKGCGFVQFANRENAEEAL 108
N T+FVG L P + D+ L FS++ +K +G GFV F N ++AE L
Sbjct: 244 NFTLFVGDLSPEIDDDSLAATFSKFPSFVQANVMWDMKTGRSRGYGFVSFQNNQDAETVL 303
Query: 109 HKLNGTVIGKQSVRLSWGRNPANKQFR 135
+NG +G +S+RL+W N+ FR
Sbjct: 304 QTMNGMSLGGRSIRLNWAVRRQNQNFR 330
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYG-EIASVKIPVGKGC-----GFVQFANRENAE 105
+ S TT++VG +D +V+++ LR F G +I S+KI K F+++ + AE
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 106 EALHKLNGTVIGKQSVRLSW 125
AL LNGTV+ ++++W
Sbjct: 213 NALQALNGTVLANYPLKITW 232
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 43 PGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
P GPQS + S +++G L DL +G I + K+ KGC FV
Sbjct: 389 PILGPQSYEMVLRQTPSWLCAVYLGNLAHYTQQSDLIPLLQNFGYIVNFKLLPEKGCAFV 448
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFR 135
+ + E A A+ +LNG + + ++ WG+ ANK R
Sbjct: 449 TYDSHERAALAIVQLNGFNVNGRPLKCGWGK--ANKTVR 485
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYAS-----------NGAPGQGPQS 49
++EM G + +R +R AT SS + ++ GG+A G+ G GP
Sbjct: 199 ISEMTGKWLGTRSIRCNWATKTNSSASADE-TNNGGHAVGMNDSKSEDRPEGSAGDGP-- 255
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGE--IASVKIPVGKGCGFVQFANRENAEEA 107
E + TT++VG L V +L + F G I V++ KG GFV++ E A A
Sbjct: 256 ENNPQYTTVYVGNLAHEVNQGELHRWFHCMGAGVIEDVRVQKDKGFGFVRYRTHEEAALA 315
Query: 108 LHKLNGTVIGKQSVRLSWGRNP 129
+ NG V+ +SV+ SWG P
Sbjct: 316 IQAANGRVLCGKSVKCSWGSKP 337
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E + + +FVG L P VTD L F Y + ++ +G GFV F ++
Sbjct: 133 QREDTTGHYNVFVGDLSPEVTDATLFAAFCVYPSCSDARVMWDQRSGRSRGFGFVSFRSQ 192
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGN 140
+ AE A+ ++ G +G +S+R +W N AD N
Sbjct: 193 QEAENAISEMTGKWLGTRSIRCNWA-TKTNSSASADETN 230
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 21/133 (15%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
+S +++VG + VT+ L + FS G + K+ + GFV + + A AL
Sbjct: 53 TSCRSVYVGNIHTKVTEALLAEVFSNIGPLEGCKLIRKEKSSYGFVDYLDHIYAAVALTT 112
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 170
LNG +I Q ++++W AY GQ D G+ D S
Sbjct: 113 LNGRLIFGQPIKVNW-------------------AYASGQREDTTGHYNVFVGDLSPEVT 153
Query: 171 AAAAYGAYPVYGS 183
A + A+ VY S
Sbjct: 154 DATLFAAFCVYPS 166
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ ++D +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGT 262
Query: 115 VIGKQSVRLSWGRN---------PANKQFRADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ P +Q DYG W+ Y Q Y Y G+ +P
Sbjct: 263 TIEGHIVKCYWGKESPDMAKTVQPVTEQ--VDYGQWGHWNQVYGNPQQYGQYMTNGWQVP 320
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T +D+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 176
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E +S T++VG L +VT+ + Q F+Q G S K+ FV+F +A
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|167525647|ref|XP_001747158.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774453|gb|EDQ88082.1| predicted protein [Monosiga brevicollis MX1]
Length = 409
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 47 PQSEG--DSSNTTIFVGGLDP--NVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
P++E D+S TT+++GG+ P N+T +DLR F ++ ++A+V++ + FV+FA RE
Sbjct: 239 PKAEAPADTSITTLYIGGVRPDLNITADDLRDYFEKHSQVAAVRLAPKQSAAFVEFATRE 298
Query: 103 NAEEALH-KLNGTVIGKQSVRLSWGRNPAN 131
AE+A+ +I + +R+ WG+ +N
Sbjct: 299 GAEQAMEIAAVNCIIKGEPLRVMWGKARSN 328
>gi|440800622|gb|ELR21658.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 229
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEALHKLNGT 114
+F+G L VT+E LRQ F+ YG I + I P CGFV++ NRE AE+A+ LNG
Sbjct: 103 LFIGKLPTTVTEELLRQIFAPYGNIEKLNILKGPADVNCGFVKYDNREEAEKAIRALNGK 162
Query: 115 VIG 117
V+G
Sbjct: 163 VVG 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 47 PQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFA 99
P +G+ + +FVG + NV + +R FS YGEI + I + KGCGFV ++
Sbjct: 2 PDQQGECAKPWKLFVGQVPKNVQEATIRSFFSPYGEIVHMNILRDRFTQISKGCGFVSYS 61
Query: 100 NRENAEEALHKLNGTV 115
+E A++A+ L+ V
Sbjct: 62 TKEAADKAISALHSVV 77
>gi|4680498|gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGY--ASNGAPGQGPQS------EGD 52
+ E+NG + +R +R AT ++G ++Q + G +NG+ G + E +
Sbjct: 303 INELNGKWLGNRQVRCNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENN 362
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L +V D+ + F G I V++ KG GFV+++ E A A+
Sbjct: 363 PQYTTVYVGNLPHDVNSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQT 422
Query: 111 LNGTVIGKQSVRLSWGRNPA 130
NG +IG + ++ SWG P
Sbjct: 423 GNGQLIGGRQIKCSWGSKPT 442
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 91 KGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
+G GFV F N+++A+ A+++LNG +G + VR +W AN
Sbjct: 286 RGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWATKGAN 326
>gi|391327440|ref|XP_003738208.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Metaseiulus
occidentalis]
Length = 364
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D + TT+++GG+ TD+D+R F Q+GEI ++ I + C F+ F R +A+ A +
Sbjct: 227 ADKNITTLYLGGVPKETTDQDIRNHFYQFGEIRAINIVEKQSCAFICFMTRASAQLAAER 286
Query: 111 -LNGTVIGKQSVRLSWGRNPA 130
N + + + + WGR+PA
Sbjct: 287 SFNKLFLHGRRINVKWGRSPA 307
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFV 96
PG+ S + +FVG L + LR+ F ++GE++ KI GKG GFV
Sbjct: 119 PGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFV 178
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
+ RE+AE A+ ++NG +G++++R +W R P
Sbjct: 179 SYPRREDAERAIDEMNGAWLGRRTIRTNWATRKP 212
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGD------ 52
+ EMNG + R +R AT P + + G G QSE
Sbjct: 190 IDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGRDRYHNQSEKTYDEIFN 249
Query: 53 ---SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ NT+++VG + N+ ++++R+ F ++G I V+ +G FV+F +E+A A+
Sbjct: 250 QAAADNTSVYVGNI-ANLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIV 308
Query: 110 KLNGTVIGKQSVRLSWGR 127
++N IG Q VR SWG+
Sbjct: 309 QMNNADIGGQIVRCSWGK 326
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC----GFVQFANRENAEEALHKLN 112
T+FV LDP +TDE L F+Q G + KI + +G FV+F++ A AL N
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKI-IFEGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 113 GTVIGKQSVRLSWGRNP 129
G + ++ + ++W P
Sbjct: 100 GRELLEKEMHVTWAFEP 116
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
++T++VG L+ T+E L + FS YG++ S +I KG GFV+FA+ E AE+A++ LN T
Sbjct: 3 SSTLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKGFGFVEFASVEEAEKAMNALNET 62
Query: 115 VIGKQSVRLSWGRNP 129
+++R+ R P
Sbjct: 63 QCMGRTLRIDEARAP 77
>gi|405971196|gb|EKC36046.1| Pre-mRNA-splicing factor RBM22 [Crassostrea gigas]
Length = 434
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D + TT+++G L + +++LR F Q+GEI + + + C FVQF +R +AE A K
Sbjct: 228 DKTITTLYIGNLGEKIGEKELRDHFYQFGEIRMINVVAKQQCAFVQFTSRSSAEAAAEKS 287
Query: 111 LNGTVIGKQSVRLSWGRN 128
N ++G + + + WGR+
Sbjct: 288 FNKLIVGGRRLTIKWGRS 305
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY-QQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + QQQ +Q G Y + P QGPQS
Sbjct: 231 LSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHSFPTQGPQSYETI 290
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G F++ + ENA A
Sbjct: 291 VSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFIKMDSHENAANA 350
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ L+G + + ++ SWG++ P QF
Sbjct: 351 ICHLSGYQVNGRPLKCSWGKDRPPTGQF 378
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+QQ+ Y SN A E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 149 HQQEIRVNWAYQSNTA-----TKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNVSEAR 203
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGN 140
+ +G GFV F +R AE+AL ++G +G +++R +W AN++ + +
Sbjct: 204 VMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNW----ANQKGQPSFSQ 259
Query: 141 QWSGAYYGGQVYDGYGYAIPPPNDPSMY 168
Q + A G YG+ P P Y
Sbjct: 260 QQAMAQMGMTPTTPYGHHSFPTQGPQSY 287
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
S G + A GQ ++ + + ++VGGLDP VT++ L+Q F G + SVKI K
Sbjct: 57 SMSGLMSPTSAGGQVRRAAPEPNKRALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK 116
Query: 92 GC-------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQW 142
GFV++ + AE A+ LNG + +Q +R++W +N + D N +
Sbjct: 117 NFQSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQ-SNTATKEDTSNHF 173
>gi|159163531|pdb|1X4G|A Chain A, Solution Structure Of Rrm Domain In Nucleolysin Tiar
Length = 109
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 25 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 84
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 85 TIEGHVVKCYWGK 97
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 93 QGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 152
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 153 FRDKTDAEQAIATMNGEWLGSRAIRVNW 180
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +L G
Sbjct: 232 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQ 291
Query: 115 VIGKQSVRLSWGRNPAN 131
++ + ++ SWG++ A+
Sbjct: 292 MVHGRPIKCSWGKDRAD 308
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 111 LNGTVIGKQSVRLSW 125
LNG I +R++W
Sbjct: 76 LNGRKIFDTEIRVNW 90
>gi|47216544|emb|CAG04722.1| unnamed protein product [Tetraodon nigroviridis]
Length = 221
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +T+ ++Q FS +G+I +++ KG F++F++ ++A A+ +NGT
Sbjct: 90 NCTVYCGGIQAGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFIRFSSHDSAAHAIVSVNGT 149
Query: 115 VIGKQSVRLSWGRNPAN-----KQFRADYGNQWSGAY 146
VI V+ WG+ + +Q +Y QW+ Y
Sbjct: 150 VIEGNVVKCFWGKESPDMTKNSQQVEYNYWGQWNQTY 186
>gi|401422974|ref|XP_003875974.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492214|emb|CBZ27488.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 696
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FV GL +V D++L + F ++GEI S K+ + +G FV+F N ENAE A+ L
Sbjct: 235 LFVCGLPVSVRDKELLELFEKHGEIESAKVMLDIHTGRSRGIAFVKFKNVENAENAVDAL 294
Query: 112 NGTVI-GKQ-SVRLSWGR------NPANKQF 134
NGT + G Q +VR++ R NP NK F
Sbjct: 295 NGTTVNGHQITVRVANSRAAYLPGNPTNKTF 325
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEA 107
S+TTI+VG + ++ ++L++ F +YG I + +PV KG FVQF + +AEE+
Sbjct: 4 SSTTIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEES 63
Query: 108 LHKLNGTVIGKQSVRLSWG 126
+L G IGK+S+RL +
Sbjct: 64 FDRLQGYRIGKRSLRLEFA 82
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 127 -RNPANKQFRADY 138
N NK+ +++
Sbjct: 171 QSNSTNKEDTSNH 183
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 362 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 396
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL ++G +G +++R +W
Sbjct: 238 ADKALSSMDGEWLGSRAIRCNW 259
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 16/131 (12%)
Query: 4 MNGVYCSSRPMRIGAAT-----PRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTT 57
MNG + SR +R +T PR++S G S PG + + +NTT
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPAPRENSK---------GIKSGKTPGFEEIYNNTSPTNTT 207
Query: 58 IFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
++ GG PN +TDE +++ F+Q+G I ++ KG F++FA++E+A A+ + + +
Sbjct: 208 VYCGGFPPNAITDELIQKHFAQFGHINDTRVFKDKGYAFIRFASKESAARAIEGTHNSEV 267
Query: 117 GKQSVRLSWGR 127
V+ WG+
Sbjct: 268 QGHPVKCYWGK 278
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 40 NGAPGQGPQSEGDSS-NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+S + IFVG L P + E LR+ F+ +GEI++ +I +G
Sbjct: 79 NWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
FV F + AE A+ +NG +G +S+R +W R P
Sbjct: 139 YAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKP 176
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC---GFVQFANRENAEEALHKLNG 113
T++VG LD +VT+E L FSQ G + S KI F+++AN ++A+ AL +N
Sbjct: 9 TLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTALAAMNK 68
Query: 114 TVIGKQSVRLSWGRNPANK 132
+ K+ +R++W + N+
Sbjct: 69 RMFLKKEIRVNWATSAGNQ 87
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG Q++ D+SN +FVG L P V+DE L + FS +G ++ ++ +G GF+
Sbjct: 85 QGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 144
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 145 FRDKTDAEQAIATMNGEWLGSRAIRVNW 172
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 40 NGAPGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC 93
N APG GP S + + NTT++VG L P T DL F G I+ +++ +G
Sbjct: 223 NFAPGGGPLSFEQVVAQTPAYNTTVYVGNLVPYTTQADLIPLFQGIGYISEIRMQADRGF 282
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPAN 131
FV+ E+A A+ +L G ++ + ++ SWG++ A+
Sbjct: 283 AFVKLDTHEHAALAIVQLQGQLVHGRPIKCSWGKDRAS 320
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 111 LNGTVIGKQSVRLSW 125
LNG I +R++W
Sbjct: 68 LNGRKIFDTEIRVNW 82
>gi|218201471|gb|EEC83898.1| hypothetical protein OsI_29913 [Oryza sativa Indica Group]
Length = 407
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---PG-QGPQSEGDSSN- 55
+TEM G + SR +R AT + Q+ + +NG+ PG + Q G N
Sbjct: 176 ITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENP 235
Query: 56 ------TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEA 107
TT++VG L V ++L + F G I V++ KG GFV+++N A A
Sbjct: 236 ENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALA 295
Query: 108 LHKLNGTVIGKQSVRLSWGRNPA 130
+ NG V+ + ++ SWG P
Sbjct: 296 IQMANGLVVRGKPIKCSWGNKPT 318
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + PNVT+ L + F G + K+ + GFV + +R +A A+
Sbjct: 70 STCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMT 129
Query: 111 LNGTVIGKQSVRLSW 125
L+G I Q+++++W
Sbjct: 130 LHGRHICGQAIKVNW 144
>gi|156546667|ref|XP_001603806.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Nasonia
vitripennis]
Length = 409
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK- 110
D+S TT+++G + +T++ LR F QYGEI SV + C F+++ NR AE A +
Sbjct: 228 DTSITTLYIGNIGEVLTEKTLRDHFYQYGEIRSVTMVAKNQCAFIEYTNRSAAELAAERT 287
Query: 111 LNGTVIGKQSVRLSWGR 127
N ++G + + + WGR
Sbjct: 288 FNKLILGGRRLNIKWGR 304
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 127 -RNPANKQFRADY 138
N NK+ +++
Sbjct: 171 QSNSTNKEDTSNH 183
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 362 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 396
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL ++G +G +++R +W
Sbjct: 238 ADKALSSMDGEWLGSRAIRCNW 259
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 18/133 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ L+Q
Sbjct: 59 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 110
Query: 76 FSQYGEIASVKIPVGKGC--------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG- 126
F G + SVKI K GFV+F + AE A+ LNG I + +R++W
Sbjct: 111 FETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNWAY 170
Query: 127 -RNPANKQFRADY 138
N NK+ +++
Sbjct: 171 QSNSTNKEDTSNH 183
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGGYASNGA------PGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G A P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSYDMV 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G F++ ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQADRGFAFIKMDTHENAAMA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 362 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 396
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 237
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL ++G +G +++R +W
Sbjct: 238 ADKALSSMDGEWLGSRAIRCNW 259
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 17/103 (16%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---- 87
+S GGY AP + + ++VGGLDP VT++ L+Q F G + SVKI
Sbjct: 75 TSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDK 126
Query: 88 -----PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
G GFV+F + AE A+ LNG I + +R++W
Sbjct: 127 NGQFTTKGHNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 169
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R
Sbjct: 179 EDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTE 238
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL+ ++G +G +++R +W
Sbjct: 239 ADKALNSMDGEWLGSRAIRCNW 260
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
+ M+G + SR +R A + QQ + + + P G QS
Sbjct: 243 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTAFGHHHFPTHGIQSYDMV 302
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + ++ +G FV+ + ENA A
Sbjct: 303 AQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQADRGFAFVKMDSHENAASA 362
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +LNG + + ++ SWG++ P QF
Sbjct: 363 ICQLNGYNVNGRPLKCSWGKDRPPTGQF 390
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSY----DDVVNQSSPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 208 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 267
Query: 121 VRLSWGR 127
V+ WG+
Sbjct: 268 VKCYWGK 274
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 79 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 175
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAS 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 252 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 311
Query: 114 TVIGKQSVRLSWGR 127
T I V+ WG+
Sbjct: 312 TTIEGHVVKCYWGK 325
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 148 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 207
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 208 GGQWLGGRQIRTNWATRKP 226
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 113
+VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +NG
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAASALAAMNG 108
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 109 RKIMGKEVKVNWATTPSSQK 128
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYA--SNGAPGQGPQSEGDSSN--- 55
+ ++ G + SR +R AT S+ ++Q S +NG+ G ++ D +
Sbjct: 189 INDLTGKWLGSRQIRCNWATKGASASDEKQTSDSRSVVELTNGSSEDGQETTNDDTPEKN 248
Query: 56 ---TTIFVGGLDPNVTDEDLRQPFSQY--GEIASVKIPVGKGCGFVQFANRENAEEALHK 110
TT++VG L P VT DL Q F G I V++ KG GFV+++ A A+
Sbjct: 249 PQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQRDKGFGFVRYSTHAEAALAIQM 308
Query: 111 LNGTVIGKQSVRLSWGRNP 129
N ++ + ++ SWG P
Sbjct: 309 GNARILFGKPIKCSWGSKP 327
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E S + IFVG L P VTD L FS Y + ++ +G GFV F N+
Sbjct: 123 QREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 182
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWG 126
++A+ A++ L G +G + +R +W
Sbjct: 183 QDAQSAINDLTGKWLGSRQIRCNWA 207
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANR 101
G P SS +++VG + P VTD L++ FS G + K+ + GFV + +R
Sbjct: 34 GNLPPGFDSSSCRSVYVGNIHPQVTDSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDR 93
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYA 158
+A A+ LNG I Q ++++W + ++ + + N + G +V D YA
Sbjct: 94 SSAAFAIVTLNGRNIFGQPIKVNWAYASSQREDTSGHFNIFVGD-LSPEVTDATLYA 149
>gi|431906556|gb|ELK10677.1| Fox-1 like protein A [Pteropus alecto]
Length = 273
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 39 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVG----KG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 25 TDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 84
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWS-----GA 145
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W GA
Sbjct: 85 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 144
Query: 146 YYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYPVYGSHQQQ 187
Y + Y G+ P + Y A PVYG+ Q
Sbjct: 145 VYSPEFYAVPGFPYPAATAAAAYRGAHLVVYQEPVYGNKLLQ 186
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ ++A A+ +NGT
Sbjct: 205 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 264
Query: 115 VIGKQSVRLSWGRNPAN-----KQFRADYGNQWSGAY 146
VI V+ WG+ + +Q +Y QW+ Y
Sbjct: 265 VIEGNLVKCFWGKESPDMQKNSQQVEYNYWGQWNQPY 301
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 82 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 141
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQFR 135
GFV F N+ +AE A+ K+ G + + +R +W + PA K F+
Sbjct: 142 GFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQ 185
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
+ +S + T++VG L +VT+ + Q FSQ G S K+ FV+F + ++A
Sbjct: 4 DEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAA 63
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPA 130
A +N I + V+++W +P+
Sbjct: 64 SARATMNKRKILGKEVKVNWATSPS 88
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 40 NGAPGQGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
FV F + +AE A++ +NG +G +S+R +W R P
Sbjct: 139 YAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKP 176
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 1 MTEMNGVYCSSRPMRIGAAT--------PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGD 52
+ MNG + SR +R +T P K SGY+ ++
Sbjct: 154 INSMNGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYR------------AVTFDDVYNQSS 201
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+N T++ GG+ +T+E + Q FS++G I ++ KG F++F+ +E A A+ ++
Sbjct: 202 PTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFRDKGYAFIKFSTKEAATTAIEAVH 261
Query: 113 GTVIGKQSVRLSWGR 127
T I V+ WG+
Sbjct: 262 NTEINGHPVKCFWGK 276
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 52 DSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEA 107
D SN T++VG LDP+VT+E L F+ G + + K+ P F++F A A
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATA 62
Query: 108 LHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQW 142
L +NG + + ++++W P N Q + D N +
Sbjct: 63 LAAMNGRLFLDKEMKVNWATTPGN-QPKLDTSNHY 96
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENA 104
+G ++ + NTT++VG L P T DL F G ++ +++ +G FV+ E+A
Sbjct: 237 EGVVTQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQSDRGFAFVKLDTHEHA 296
Query: 105 EEALHKLNGTVIGKQSVRLSWGRNPAN 131
A+ +L G ++ + ++ SWG++ A+
Sbjct: 297 AMAIVQLQGQLVHGRPIKCSWGKDRAD 323
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 111 LNGTVIGKQSVRLSW 125
LNG I +R++W
Sbjct: 78 LNGRKIFDTEIRVNW 92
>gi|348558054|ref|XP_003464833.1| PREDICTED: RNA binding protein fox-1 homolog 3 [Cavia porcellus]
Length = 376
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 3 EMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGG 62
E G S++P+ + P+ Q SQ ++S+ Q P+ + V
Sbjct: 56 EQPGTEASTQPIAVTQTVPQTDEA--AQTDSQPLHSSDPTEKQQPKR--------LHVSN 105
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANRENAEEALHKLNGTVIGK 118
+ D DLRQ F Q+G+I V+I KG GFV F +A+ A KLNGT++
Sbjct: 106 IPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLNGTIVEG 165
Query: 119 QSVRL--SWGRNPANKQFRADYGNQWS-----GAYYGGQVYDGYGYAIP 160
+ + + + R NK+ Y N W GA YG + Y G+ P
Sbjct: 166 RKIEVNNATARVMTNKKTGNPYTNGWKLNPVVGAVYGPEFYAVTGFPYP 214
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT RK + Y S S ++ SN T++
Sbjct: 164 IQQMGGQWLGGRQIRTNWAT-RKPPAPKSTYESNTKQLSYDEV----VNQSSPSNCTVYC 218
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NGT I
Sbjct: 219 GGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHV 278
Query: 121 VRLSWGR 127
V+ WG+
Sbjct: 279 VKCYWGK 285
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 168 GGQWLGGRQIRTNWATRKP 186
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 3 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 ALAAMNGRKIMGKEVKVNWATTPSSQK 88
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + SR +R AT RK + Q ++ ++ +N T++ GG+
Sbjct: 162 MNGQWLGSRAIRTNWAT-RKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGI 220
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+++E +++ FS YG I +++ KG F++F +E A A+ + + + Q+V+
Sbjct: 221 TQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIRFGTKEAATHAIVATHNSDVNGQTVKC 280
Query: 124 SWGR---NPANKQ 133
SWG+ +P N+Q
Sbjct: 281 SWGKEATDPNNQQ 293
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 30/140 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MN C + M++ AT +PG P+ + S + IFV
Sbjct: 68 LLAMNKRLCFGKEMKVNWAT---------------------SPGNTPKLD-TSKHHHIFV 105
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGT 114
G L P + LR F+ +G+I+ ++ KG GFV F + +AE A+ +NG
Sbjct: 106 GDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQ 165
Query: 115 VIGKQSVRLSWG--RNPANK 132
+G +++R +W + PAN+
Sbjct: 166 WLGSRAIRTNWATRKPPANR 185
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
D T++VG LD VT+E L F Q G++ KI P FV+F++ ++A AL
Sbjct: 9 DCQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDHQSAASAL 68
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN 131
+N + + ++++W +P N
Sbjct: 69 LAMNKRLCFGKEMKVNWATSPGN 91
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P +G S GG+ AP + + ++VGGLDP VT+
Sbjct: 51 NTNPIPTAITSPMGENGGVMSPDSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 102
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC----------GFVQFANRENAEEALHKLNGTVIGKQ 119
E LRQ F G + +VKI K GFV++ + AE A+ LNG + +
Sbjct: 103 EILRQIFETTGHVQNVKIIPDKNVGAVQSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQA 162
Query: 120 SVRLSWG--RNPANKQFRADY 138
+R++W N +NK+ +++
Sbjct: 163 EIRVNWAYQSNTSNKEDTSNH 183
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GF F R++
Sbjct: 178 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQD 237
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL ++G +G +++R +W
Sbjct: 238 AEKALSSMDGEWLGSRAIRCNW 259
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ S G + + P G QS
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMI 301
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T +DL F +G + + +G FV+ + ENA A
Sbjct: 302 VQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQSDRGFAFVKMDSHENAALA 361
Query: 108 LHKLNGTVIGKQSVRLSWGRNPA 130
+ +L+G + + ++ SWG++ A
Sbjct: 362 ICQLSGYNVNGRPLKCSWGKDKA 384
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + FS +G ++ ++ +G GF+
Sbjct: 95 QGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 154
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 155 FRDKTDAEQAIATMNGEWLGSRAIRVNW 182
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 81/195 (41%), Gaps = 35/195 (17%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQY----SSQGGYASNGAPGQGPQS------E 50
+ MNG + SR +R+ A + G S GG + GP S +
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQ 224
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
+ NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+ +
Sbjct: 225 TPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQ 284
Query: 111 LNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAA 170
L G ++ + ++ SWG++ RAD G G P P
Sbjct: 285 LQGQMVHGRPIKCSWGKD------RAD-----------GTAPLSTGSMSPTP-------- 319
Query: 171 AAAAYGAYPVYGSHQ 185
AAA YG P+YG Q
Sbjct: 320 AAAPYGQLPMYGMPQ 334
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G GFV++ + AE AL
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 111 LNGTVIGKQSVRLSW 125
LNG I +R++W
Sbjct: 78 LNGRKIFDTEIRVNW 92
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GG+ AP + + ++VGGLDP VT++ LRQ
Sbjct: 68 IPTAITSPMSGNMMSPTSAGGFVRRAAP--------EPNKRALYVGGLDPRVTEDILRQI 119
Query: 76 FSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 130
F G + SVKI K GFV++ + AE A+ LNG + + +R++W +
Sbjct: 120 FETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMATLNGRRVHQSEIRVNWAYQ-S 178
Query: 131 NKQFRADYGNQW 142
N + D N +
Sbjct: 179 NSNNKEDTSNHF 190
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S++ IFVG L V DE L Q FS +G ++ ++ +G GFV F R +
Sbjct: 184 EDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSD 243
Query: 104 AEEALHKLNGTVIGKQSVRLSWG 126
AE+AL ++G +G +++R +W
Sbjct: 244 AEKALSSMDGEWLGSRAIRCNWA 266
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 248 LSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 307
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 308 VAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 367
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +L+G + + ++ SWG++ P QF
Sbjct: 368 ICQLSGYNVNGRPLKCSWGKDRPPTGQF 395
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +T+ +RQ FS +G+I +++ KG F++F++ E+A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGT 262
Query: 115 VIGKQSVRLSWGR---NPANKQFRADYGN--QWSGAYYGGQVYDGY---GYAIP 160
I V+ WG+ + A +YG QW+ Y Q Y Y G+ +P
Sbjct: 263 TIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWNQMYGNPQQYGQYMTNGWQVP 316
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 16/114 (14%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T +D+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP---------ANKQFRAD 137
GFV F N+ +AE A+ + G +G + +R +W R P + KQ R D
Sbjct: 140 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSVQDNSAKQLRFD 193
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
E +S T++VG L +VT+ + Q F+Q G S K+ FV+F +A
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEE 106
+ SN ++VGGLD ++++ LR+ FSQ+GEI +VKI K F++F N NA
Sbjct: 98 EVSNKILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASN 157
Query: 107 ALHKLNGTVIGKQSVRLSWG 126
A +LN + + ++W
Sbjct: 158 AFQELNNKTLQNSVISINWA 177
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQF 98
Q Q++ S + IFVG L + DE L+ F++Y + + +G GFV F
Sbjct: 179 QSQQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKSLVQAHVMWDMQSGRSRGYGFVSF 238
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWG 126
N+++AE AL G+ IG + VRL+W
Sbjct: 239 TNQQDAELALTTKQGSQIGNRQVRLNWA 266
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TT+++G L P T DL +G I +K K C F+++ + E A A+ +L+G +
Sbjct: 391 TTVYLGNLTPYTTQNDLIPLVQNFGYIVDLKFHQEKNCAFIKYDSHERAALAIVQLSGLI 450
Query: 116 IGKQSVRLSWGRNPAN 131
I + ++ WG++ N
Sbjct: 451 INGRPLKTGWGKDRIN 466
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 192 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 251
Query: 114 TVIGKQSVRLSWGR 127
T I V+ WG+
Sbjct: 252 TTIEGHIVKCYWGK 265
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G I+ ++ KG
Sbjct: 70 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGY 129
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ ++ G +G + +R +W R P
Sbjct: 130 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 166
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 59 FVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEEALHKLNG 113
+VG L +VT+ + Q FSQ G + K+ + C FV+F +A AL +NG
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFYEHRHAAAALAAMNG 59
Query: 114 TVIGKQSVRLSWGRNPANKQ 133
I + V+++W P++++
Sbjct: 60 RKIMGKEVKVNWATTPSSQK 79
>gi|330812947|ref|XP_003291377.1| hypothetical protein DICPUDRAFT_38905 [Dictyostelium purpureum]
gi|325078437|gb|EGC32088.1| hypothetical protein DICPUDRAFT_38905 [Dictyostelium purpureum]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRE 102
Q P+ D S TT+F+G LD + V +ED+R F YG + +K+ + C FV F R
Sbjct: 186 SQPPKKPSDESVTTLFLGNLDVDKVKEEDIRNNFFVYGTVKKIKMVPHQKCAFVTFDTRS 245
Query: 103 NAEEALHKL-NGTVIGKQSVRLSWGR 127
AE A+ L N I +++L+W +
Sbjct: 246 AAENAIDSLYNNFKIDDCNIKLNWSK 271
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV--------GKGCGFVQFANRENAEE 106
NT ++VG L ++T+++L++ F GE+ VKI KG GF++ +N ENA++
Sbjct: 3 NTKLYVGNLSYDMTEQELKKYFESVGEVTHVKIIFDESTSSKRSKGFGFIEMSNEENAKQ 62
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQF 134
A+ KLNGT + +++ +S R A K +
Sbjct: 63 AIEKLNGTELMGRNIIVSAARPRAKKDY 90
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 19/141 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 236 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 284
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A A+ ++ T
Sbjct: 285 YVGGVNSALTALSEEILQKTFALYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTE 344
Query: 116 IGKQSVRLSWGR---NPANKQ 133
I Q V+ SWG+ +P N Q
Sbjct: 345 INAQPVKCSWGKESGDPNNSQ 365
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 180 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 239
Query: 112 NGTVIGKQSVRLSWG--RNPANKQ 133
NG +G +S+R +W + PA+K+
Sbjct: 240 NGQWLGSRSIRTNWATRKPPASKE 263
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +++ +RQ FS +G+I +++ KG F++F++ ++A A+ +NGT
Sbjct: 203 NCTVYCGGIQSELSEHLMRQTFSPFGQIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGT 262
Query: 115 VIGKQSVRLSWGRNPAN-----KQFRADYGNQWSGAY 146
I +V+ WG+ + +QF QW+ Y
Sbjct: 263 SIEGHAVKCYWGKESTDMAKNPQQFEYSQWGQWNQVY 299
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L+P+++ ED+R F+ +G+I+ ++ KG
Sbjct: 80 NWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKISDARVVKDLTTGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQFRADYGNQ 141
GFV F N+ +AE A+ + G +G + +R +W + PA K + Q
Sbjct: 140 GFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSLQDSVSKQ 189
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
+ +S T++VG L +VT+ + Q F+Q G S K+ FV+F +A
Sbjct: 2 DDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 62 AALAAMNGRKILGKEVKVNWATTPSSQK 89
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MN C + M++ A SS GG + + P+ + S + IFVG L
Sbjct: 69 MNKRICLGKEMKVNWA------------SSPGGSSDSVVHHNLPKPDT-SQHHHIFVGDL 115
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKLNGTVIG 117
P++T E L+ F +GEI+ K+ KG GFV F + +A+ A+ ++NG +G
Sbjct: 116 SPDITTETLKNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLG 175
Query: 118 KQSVRLSW-GRNP 129
+++R +W R P
Sbjct: 176 SRAIRTNWAARKP 188
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +MNG + SR +R A + + Y + S+ N + + N T++
Sbjct: 166 IEQMNGQWLGSRAIRTNWAARKPPAPYSKDTSN-----VNKLNFEDVYRQASPRNFTVYC 220
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GGL N + +RQ FS +G I ++ KG FV+F N+E+A A+ L+G+ + QS
Sbjct: 221 GGL-INSDENIIRQTFSPFGRILEIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQS 279
Query: 121 VRLSWGR 127
V+ SWG+
Sbjct: 280 VKCSWGK 286
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + +S ++ + + G P Q + T+F+
Sbjct: 269 IKEMQGKEIDGRPINVDMSTSKPASNPKEDRAKKFG----DVPSQ--------PSDTLFL 316
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L N +++ + F YG I SV+IP KG G+VQ+A+ E A++AL KL G
Sbjct: 317 GNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDKLQGE 376
Query: 115 VIGKQSVRLSW 125
I + VRL +
Sbjct: 377 YIDNRPVRLDF 387
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG Q++ D+SN +FVG L P V DE L + F+ +G ++ ++ +G GF+
Sbjct: 125 QGTQNKEDTSNHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLA 184
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 185 FRDKTDAEQAIATMNGEWLGSRAIRVNW 212
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L P T DL F G ++ +++ +G FV+ ENA A+ +L G
Sbjct: 270 NTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQ 329
Query: 115 VIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIPPPNDPSMYAAAAAA 174
++ + ++ SWG++ + AD G G I P A A A
Sbjct: 330 LVHGRPIKCSWGKD----RSAADTG--------------APGSMITP-------ATGAGA 364
Query: 175 YGAYPVYGSHQ 185
YG P+YG Q
Sbjct: 365 YGGVPMYGMPQ 375
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANRENAEEALHK 110
++VG L P VT+ L + F+ G + VKI G+ GFV++ + AE AL
Sbjct: 48 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYGFVEYMDMRAAETALQT 107
Query: 111 LNGTVIGKQSVRLSW 125
LNG I +R++W
Sbjct: 108 LNGRKIFDTEIRVNW 122
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + SS+ +FVG L P +T +D++ F+ +G+I+ ++ KG
Sbjct: 79 NWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
GFV F N+ +AE A+ ++ G +G + +R +W R PA K
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPK 178
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E A A+ +NG
Sbjct: 201 SNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNG 260
Query: 114 TVIGKQSVRLSWGRNPAN 131
T I V+ WG+ +
Sbjct: 261 TSIEGYVVKCYWGKETTD 278
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + + F Q G S K+ V C FV+F +A
Sbjct: 3 DDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
+ +NG I + V+++W P +++
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQK 88
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 19/145 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 229 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 277
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A A+ ++ T
Sbjct: 278 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTE 337
Query: 116 IGKQSVRLSWGR---NPANKQFRAD 137
I Q V+ SWG+ +P N Q A
Sbjct: 338 INAQPVKCSWGKESGDPNNSQSMAS 362
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 112 NGTVIGKQSVRLSWG--RNPANKQ 133
NG +G +S+R +W + PA+K+
Sbjct: 233 NGQWLGSRSIRTNWATRKPPASKE 256
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ ++A A+ +NGT
Sbjct: 227 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 286
Query: 115 VIGKQSVRLSWGRNPAN-----KQFRADYGNQWSGAY 146
VI V+ WG+ + +Q +Y QW+ Y
Sbjct: 287 VIEGNLVKCFWGKESPDMQKNSQQVEYNYWGQWNQPY 323
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 104 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 163
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQFR 135
GFV F N+ +AE A+ K+ G + + +R +W + PA K F+
Sbjct: 164 GFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQ 207
>gi|149067625|gb|EDM17177.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_e [Rattus norvegicus]
Length = 181
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 73 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 132
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 133 TIEGHVVKCYWGK 145
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + SS+ +FVG L P +T +D++ F+ +G+I+ ++ KG
Sbjct: 79 NWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGY 138
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
GFV F N+ +AE A+ ++ G +G + +R +W R PA K
Sbjct: 139 GFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPK 178
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ +M G + R +R AT + + + SS + + Q SN T++
Sbjct: 153 IQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQS-----SPSNCTVYC 207
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQS 120
GG+ +T++ +RQ FS +G+I +++ KG FV+F + E A A+ +NGT I
Sbjct: 208 GGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYV 267
Query: 121 VRLSWGRNPAN 131
V+ WG+ +
Sbjct: 268 VKCYWGKETTD 278
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + + F Q G S K+ V C FV+F +A
Sbjct: 3 DEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYC-FVEFYEHRHATA 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
+ +NG I + V+++W P +++
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPTSQK 88
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRK--------SSGYQQQYSSQGGYASNGAPGQGPQSEGD 52
+ MNG + SR +R+ A + + GG+ G+ ++
Sbjct: 161 INAMNGEWLGSRAIRVNWANQKNQGMMGDGGMGEGPPPPARSGGFQVGGSDYNMVVTQTP 220
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
SNTT++VG L P T DL F YG I +++ +G FV+ E+A A+ L
Sbjct: 221 VSNTTVYVGNLVPYCTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHEHAAMAIAYLT 280
Query: 113 GTVIGKQSVRLSWGRN 128
G + +S++ SWG++
Sbjct: 281 GQMCQGRSLKCSWGKD 296
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E +++ +F G L P VTD+ L++ FS +G ++ ++ +G GF+ F +R +
Sbjct: 97 EDVTNHFHVFCGDLSPEVTDDILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAFRDRAD 156
Query: 104 AEEALHKLNGTVIGKQSVRLSWG 126
AE A++ +NG +G +++R++W
Sbjct: 157 AEAAINAMNGEWLGSRAIRVNWA 179
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 51 GDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV-------GKGCGFVQFANREN 103
G++ +++G + P VT+ L++ F+ G + VKI G GFV+F +
Sbjct: 7 GENKRPHLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLNYGFVEFYTMQG 66
Query: 104 AEEALHKLNGTVIGKQSVRLSWG 126
AE+AL L G + ++++W
Sbjct: 67 AEQALQTLAGRKLFDTEMKVNWA 89
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 30/140 (21%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ MN C + M++ AT +PG P+ + S + IFV
Sbjct: 33 LLAMNKRLCFGKEMKVNWAT---------------------SPGNTPKLD-TSKHHHIFV 70
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKLNGT 114
G L P + LR F+ +G+I+ ++ KG GFV F + +AE A+ +NG
Sbjct: 71 GDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQ 130
Query: 115 VIGKQSVRLSWG--RNPANK 132
+G +++R +W + PAN+
Sbjct: 131 WLGSRAIRTNWATRKPPANR 150
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGL 63
MNG + SR +R AT RK + Q ++ ++ +N T++ GG+
Sbjct: 127 MNGQWLGSRAIRTNWAT-RKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTVYCGGI 185
Query: 64 DPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRL 123
+++E +++ FS YG I +++ KG F++ +E A A+ + + + Q+V+
Sbjct: 186 TQGLSEELMQKTFSSYGAIQEIRVFKDKGYAFIKVGTKEAATHAIVATHNSDVNGQTVKC 245
Query: 124 SWGR---NPANKQ 133
SWG+ +P N+Q
Sbjct: 246 SWGKEATDPNNQQ 258
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG Q++ D+SN +FVG L P V D+ L + FS +G ++ ++ +G GF+
Sbjct: 65 QGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 124
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 125 FRDKTDAEQAIATMNGEWLGSRAIRVNW 152
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQ-----GPQS------ 49
+ MNG + SR +R+ A +K+ G + G GAP GP S
Sbjct: 135 IATMNGEWLGSRAIRVNWAN-QKTQGAPPAGPPRTGMG-GGAPAPMNFQGGPLSYESVVQ 192
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
+ + NTT++VG L P T DL F G ++ +++ +G FV+ E+A A+
Sbjct: 193 QTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIV 252
Query: 110 KLNGTVIGKQSVRLSWGRN 128
+L G ++ + ++ SWG++
Sbjct: 253 QLQGQMVHGRPIKCSWGKD 271
>gi|294888423|ref|XP_002772458.1| pre-mRNA-splicing factor SLT11, putative [Perkinsus marinus ATCC
50983]
gi|239876684|gb|EER04274.1| pre-mRNA-splicing factor SLT11, putative [Perkinsus marinus ATCC
50983]
Length = 367
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 52 DSSNTTIFVGGLDPN--VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALH 109
D+S TT+++GG+DPN + + ++R F ++G+I S+ + C FV+F +R++AE+A
Sbjct: 225 DTSITTLYIGGIDPNAQIGESNIRAEFEEFGQIDSIVLVEKSNCAFVEFTSRQSAEKAAA 284
Query: 110 KLNGT--VIGKQSVRLSWGR 127
+ G+ VI +R+SW +
Sbjct: 285 EKGGSNLVINGARLRVSWAK 304
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEAL 108
++ S N T++ GG+ ++++ +RQ F +G+I +++ KG F++F+ ++A A+
Sbjct: 252 NQSSSKNCTVYCGGIGAGLSEQLMRQTFGVFGQILEIRVFPEKGYSFIRFSTHDSAAHAI 311
Query: 109 HKLNGTVIGKQSVRLSWGRNPAN--KQF-RADYGN--QWSGAYYGGQVYDGY---GYAIP 160
+NGT I V+ WG+ + K F + DY QWS Y Q Y Y G+ +P
Sbjct: 312 VSVNGTTIEGHVVKCYWGKETPDMTKNFQQVDYSQWGQWSQMYGSPQQYGQYVANGWQVP 371
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 135 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 194
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 195 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 231
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 46 GPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----------- 94
G E D T++VG L +VT+ + Q FSQ G S K+ + G
Sbjct: 36 GCDMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPV 95
Query: 95 ----------FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQ 133
FV+F +A AL +NG I + V+++W P++++
Sbjct: 96 MPNANNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQK 144
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 10 SSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTD 69
++ P+ +P SG +S GG+ AP + + ++VGGLDP VT+
Sbjct: 49 NTNPIPTAITSPMSVSGVTSP-TSAGGFVRRAAP--------EPNKRALYVGGLDPRVTE 99
Query: 70 EDLRQPFSQYGEIASVKIPVGKGC-----GFVQFANRENAEEALHKLNGTVIGKQSVRLS 124
E L+Q F G + +VKI K GF+++ + AE A+ LNG I + +R++
Sbjct: 100 EILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAERAMQTLNGRRIHQAEIRVN 159
Query: 125 WGRNPANKQFRADYGNQW 142
W +N+ + D N +
Sbjct: 160 WAYQ-SNQSSKEDTTNHF 176
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E +++ IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 170 EDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDRAD 229
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
AE+AL ++G +G +++R +W
Sbjct: 230 AEKALSSMDGEWLGSRAIRCNW 251
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 14/150 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQ-------YSSQGGYASNGAPGQGPQS---- 49
++ M+G + SR +R A + QQ + Y + P G QS
Sbjct: 234 LSSMDGEWLGSRAIRCNWANQKGQPSISQQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMI 293
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P T DL F +G + + +G FV+ ENA A
Sbjct: 294 VQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQADRGFAFVKMDTHENAAMA 353
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRA 136
+ +L+G + + ++ SWG++ P QF A
Sbjct: 354 ICQLSGYNVNGRPLKCSWGKDRPPTGQFDA 383
>gi|219520081|gb|AAI43817.1| A2BP1 protein [Homo sapiens]
Length = 370
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 39 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 118 TDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 177
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQ 150
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W G
Sbjct: 178 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 237
Query: 151 VYDGYGYAIP 160
VY YA+P
Sbjct: 238 VYSPEFYAVP 247
>gi|62088100|dbj|BAD92497.1| TIA1 cytotoxic granule-associated RNA-binding protein-like 1
isoform 2 variant [Homo sapiens]
Length = 183
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 83 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 142
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 143 TIEGHVVKCYWGK 155
>gi|428173494|gb|EKX42396.1| hypothetical protein GUITHDRAFT_74010 [Guillardia theta CCMP2712]
Length = 629
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 45 QGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCGF 95
QG +GD + T ++VG L P +++E L + F +YG IASVKI + CGF
Sbjct: 159 QGSFDDGDENTTNLYVGNLHPQISEEMLMKEFGKYGPIASVKIMWPRTDEEKSRQRNCGF 218
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
V +R++AE A LNG +++ WG+
Sbjct: 219 VNMMDRKSAEAAKDSLNGKEFFGLEMKIGWGK 250
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 160 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 219
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 220 TIEGHVVKCYWGK 232
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 37 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 96
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 97 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 133
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P +K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSK 179
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG NV EDL Q FSQ+G+I V++ KG F++F +E A A+ +
Sbjct: 205 TNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATH 264
Query: 113 GTVIGKQSVRLSWGR 127
T I V+ WG+
Sbjct: 265 NTEISGHIVKCFWGK 279
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LD +VT+ + F Q GE+ KI P F++F + A
Sbjct: 2 GDESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAAT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|149750970|ref|XP_001502643.1| PREDICTED: RNA binding protein fox-1 homolog 1 isoform 5 [Equus
caballus]
Length = 370
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 39 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 98 TDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 157
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQ 150
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W G
Sbjct: 158 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 217
Query: 151 VYDGYGYAIP 160
VY YA+P
Sbjct: 218 VYSPEFYAVP 227
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 291 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 350
Query: 114 TVIGKQSVRLSWGR 127
T I V+ WG+
Sbjct: 351 TTIEGHVVKCYWGK 364
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 146 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 205
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 206 GGQWLGGRQIRTNWATRKP 224
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKG-----CGFVQFANRENAEE 106
D T++VG L +VT+ + Q FSQ G + K+ + C FV+F +A
Sbjct: 41 DEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYC-FVEFHEHRHAAA 99
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQ 133
AL +NG I + V+++W P++++
Sbjct: 100 ALAAMNGRKIMGKEVKVNWATTPSSQK 126
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 16 IGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQP 75
I A SG +S GGY AP + + ++VGGLDP VT++ L+Q
Sbjct: 60 IPTAITSPMSGNMMSPTSAGGYVRRAAP--------EPNKRALYVGGLDPRVTEDILKQI 111
Query: 76 FSQYGEIASVKI--------PVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
F G + SVK+ G GFV+F + AE A+ LNG I + +R++W
Sbjct: 112 FETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERAMQTLNGRRIHQSEIRVNW 169
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANREN 103
E S + IFVG L V DE L Q FS +G ++ ++ +G GFV F +R +
Sbjct: 179 EDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRGD 238
Query: 104 AEEALHKLNGTVIGKQSVRLSW 125
A++AL+ ++G +G +++R +W
Sbjct: 239 ADKALNSMDGEWLGSRAIRCNW 260
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPR-KSSGYQQQYSSQGG------YASNGAPGQGPQS---- 49
+ M+G + SR +R A + + S QQQ + G + + P G QS
Sbjct: 243 LNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMV 302
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT +VG L P DL F +G + ++ +G F++ ENA A
Sbjct: 303 VQQTPQWQTTCYVGNLTPYTAQNDLVPLFQNFGYVLETRLQADRGFAFIKMDTHENAAMA 362
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQFRADYGNQ 141
+ +LNG + + ++ SWG++ P QF G Q
Sbjct: 363 ICQLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQ 397
>gi|428185581|gb|EKX54433.1| hypothetical protein GUITHDRAFT_99912 [Guillardia theta CCMP2712]
Length = 439
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 52 DSSNTTIFVGGLDPN-VTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHK 110
D S TTI+VG + N VT+ D+ F YGE+ SV+I + C FV + RE AE+A+ K
Sbjct: 270 DKSITTIWVGLVPGNPVTERDVMDQFYAYGEVKSVQIVLDANCAFVTYTTREAAEQAVEK 329
Query: 111 LNGTV-IGKQSVRLSWGR 127
L+G + I +++ WG+
Sbjct: 330 LHGNLTINGLKLKIQWGK 347
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 42 APGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGF 95
+PG P+++ SS+ IFVG L P + E LR+ F+ +GEI++ +I KG F
Sbjct: 82 SPGNQPKTD-ISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAF 140
Query: 96 VQFANRENAEEALHKLNGTVIGKQSVRLSW 125
V F + AE A+ +N I +S+R +W
Sbjct: 141 VSFVKKAEAENAIQAMNRQWIASRSIRTNW 170
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDL-RQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
++ +NTT++ GG PNV +DL + F Q+G I V++ KG F++F +E A A
Sbjct: 214 NQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTKEAAAHA 273
Query: 108 LHKLNGTVIGKQSVRLSWGR 127
+ + + + V+ WG+
Sbjct: 274 IEHTHNSEVHGNLVKCFWGK 293
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S T++VG LD +V+++ L FS G + S KI P F++++N + A AL
Sbjct: 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTAL 62
Query: 109 HKLNGTVIGKQSVRLSWGRNPANK 132
+N + ++ ++++W +P N+
Sbjct: 63 TAMNKRLFLEKEIKVNWATSPGNQ 86
>gi|345802333|ref|XP_003434908.1| PREDICTED: RNA binding protein fox-1 homolog 1 [Canis lupus
familiaris]
Length = 370
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 39 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 98 TDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 157
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQ 150
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W G
Sbjct: 158 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 217
Query: 151 VYDGYGYAIP 160
VY YA+P
Sbjct: 218 VYSPEFYAVP 227
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 4 MNGVYCSSRPMRIGAAT----PRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIF 59
M+G + R +R AT P KS+ Q+Q S + +NTT++
Sbjct: 263 MSGQWLGGRAIRTNWATRKPPPPKSNEGQKQLSYDEVLC-----------QASPTNTTVY 311
Query: 60 VGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQ 119
GG+ +T++ +R FS +G I +++ KG F++F + E A A+ +NGT I Q
Sbjct: 312 CGGITKGLTEDLMRNTFSNFGPIQEIRVFPEKGYSFIRFFSHEVAAMAIVTVNGTQIEGQ 371
Query: 120 SVRLSWGR 127
+V+ SWG+
Sbjct: 372 AVKCSWGK 379
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 49 SEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANR 101
++ D+SN +FVG L P + DL+ F+ +G+I+ ++ +G GFV F N+
Sbjct: 194 NKKDTSNHHHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNK 253
Query: 102 ENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
+AE A+ ++G +G +++R +W R P
Sbjct: 254 VDAENAIGAMSGQWLGGRAIRTNWATRKP 282
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG-----FVQF 98
G P E +S T++VG L VT++ + Q F G S K+ + + G FV+F
Sbjct: 102 GLIPSMEDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKM-ISEHAGNDPYCFVEF 160
Query: 99 ANRENAEEALHKLNGTVIGKQSVRLSWGRNPA-NKQFRADYGNQWSG 144
+ +A AL +NG I + V+++W P+ NK+ +++ + + G
Sbjct: 161 YDHNHASAALTAMNGRKIMHKEVKVNWATTPSGNKKDTSNHHHVFVG 207
>gi|195110887|ref|XP_002000011.1| GI22766 [Drosophila mojavensis]
gi|193916605|gb|EDW15472.1| GI22766 [Drosophila mojavensis]
Length = 387
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 19/141 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 103 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 151
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A A+ ++ T
Sbjct: 152 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTE 211
Query: 116 IGKQSVRLSWGR---NPANKQ 133
I Q V+ SWG+ +P N Q
Sbjct: 212 INAQPVKCSWGKESGDPNNSQ 232
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 47 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 106
Query: 112 NGTVIGKQSVRLSWG--RNPANKQ 133
NG +G +S+R +W + PA+K+
Sbjct: 107 NGQWLGSRSIRTNWATRKPPASKE 130
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 19/141 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQ--SEGDSSNTTI 58
+T MNG + SR +R AT RK ++ N P + ++ SN T+
Sbjct: 222 ITAMNGQWLGSRSIRTNWAT-RKPPASKE----------NIKPLTFDEVYNQSSPSNCTV 270
Query: 59 FVGGLDPNVT---DEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
+VGG++ +T +E L++ F+ YG I +++ KG FV+F+ +E A A+ ++ T
Sbjct: 271 YVGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTE 330
Query: 116 IGKQSVRLSWGR---NPANKQ 133
I Q V+ SWG+ +P N Q
Sbjct: 331 INAQPVKCSWGKESGDPNNAQ 351
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANRENAEEALHKL 111
IFVG L + + LR+ F+ +GEI+ ++ KG GFV F + AE A+ +
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 112 NGTVIGKQSVRLSWG--RNPANKQ 133
NG +G +S+R +W + PA+K+
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKE 249
>gi|429241386|ref|NP_596836.2| U1 snRNP-associated protein Usp109 [Schizosaccharomyces pombe
972h-]
gi|408360211|sp|O94621.2|US109_SCHPO RecName: Full=U1 snRNP-associated protein usp109
gi|347834403|emb|CAB38692.2| U1 snRNP-associated protein Usp109 [Schizosaccharomyces pombe]
Length = 365
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 2 TEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVG 61
EM G +C R + + + K++ SS G Y G P Q D +NT ++V
Sbjct: 143 VEMQGAFCLKRSILVHSVKSDKNT----YLSSPGFY---GTP-QPLNQFTDPNNTAVYVH 194
Query: 62 GLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSV 121
L N+T ++LR F +GEI + V G + FA R AE+A++++N + +
Sbjct: 195 QLPENITTQELRSYFLHFGEILYTQ--VNNNSGRIVFAQRYFAEQAINEMNNFPLHGVRI 252
Query: 122 RLSWGRNPANKQFRADYGNQW 142
+LSW R P+ + W
Sbjct: 253 QLSWARPPSMALLPSKQSTYW 273
>gi|126334689|ref|XP_001367251.1| PREDICTED: RNA binding protein fox-1 homolog 1 isoform 3
[Monodelphis domestica]
Length = 325
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 39 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 79 TDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQ 150
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W G
Sbjct: 139 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 198
Query: 151 VYDGYGYAIP 160
VY YA+P
Sbjct: 199 VYSPEFYAVP 208
>gi|215272410|ref|NP_001135805.1| RNA binding protein fox-1 homolog 1 isoform 5 [Homo sapiens]
gi|397473745|ref|XP_003808362.1| PREDICTED: RNA binding protein fox-1 homolog 1 isoform 2 [Pan
paniscus]
gi|30911059|gb|AAP41925.1|AF448859_1 ataxin 2-binding protein variant 1 [Homo sapiens]
Length = 370
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 39 SNGAPGQGP--QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 98 TDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 157
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQ 150
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W G
Sbjct: 158 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 217
Query: 151 VYDGYGYAIP 160
VY YA+P
Sbjct: 218 VYSPEFYAVP 227
>gi|340372441|ref|XP_003384752.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Amphimedon
queenslandica]
Length = 412
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKL 111
D S T++++GGL ++++ DLR F Q+GEI + + + C F+ F R AE+A+ +
Sbjct: 228 DKSITSLYIGGLSDDISERDLRDHFYQFGEIEDINVIHKQNCAFITFTTRPAAEKAVEQT 287
Query: 112 NGTVIGK-QSVRLSWGRN 128
+I K +++ WGR+
Sbjct: 288 FSKLIIKGNRLKVLWGRS 305
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 172 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 231
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 232 TIEGHVVKCYWGK 244
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 49 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 108
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 109 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 145
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P++T ED+R F+ +G I+ ++ KG
Sbjct: 80 NWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGY 139
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG--RNPANKQFR 135
GFV F N+ +AE A+ K+ G + + +R +W + PA K F+
Sbjct: 140 GFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSFQ 183
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +T+ ++Q FS +G+I +++ KG FV+F++ ++A A+ +NGT
Sbjct: 203 NCTVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGT 262
Query: 115 VIGKQSVRLSWGRNPANKQ 133
VI V+ WG+ + Q
Sbjct: 263 VIEGNLVKCFWGKESPDMQ 281
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 50 EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCG----FVQFANRENAE 105
+ +S + T++VG L +VT+ + Q FSQ G S K+ FV+F + ++A
Sbjct: 2 DEESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAA 61
Query: 106 EALHKLNGTVIGKQSVRLSWGRNPA 130
A +N I + V+++W +P+
Sbjct: 62 SARATMNKRKILGKEVKVNWATSPS 86
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
FV F + AE A++ +NG +G +S+R +W
Sbjct: 139 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 171
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T S + +++N P + ++ +N T++ GG
Sbjct: 157 MNGQWLGSRSIRTNWST----RKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGG 212
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
+TDE +++ FS +G I +++ KG F++F +E A A+ + T I V+
Sbjct: 213 FTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVK 272
Query: 123 LSWGR 127
WG+
Sbjct: 273 CFWGK 277
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD +V+++ L FSQ G + KI P FV+F N ++A AL
Sbjct: 4 ESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATAL 63
Query: 109 HKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
+N + ++++W +P N Q + D N
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGN-QPKLDTSNH 95
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNG----APGQGPQSEGDSSN- 55
+TEM G + SR +R AT + Q+ + +NG A +G Q G N
Sbjct: 220 ITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENP 279
Query: 56 ------TTIFVGGLDPNVTDEDLRQPFSQYG--EIASVKIPVGKGCGFVQFANRENAEEA 107
TT++VG L V ++L + F G I V++ KG GFV++ A A
Sbjct: 280 ENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALA 339
Query: 108 LHKLNGTVIGKQSVRLSWGRNPA 130
+ NG VI + ++ SWG P
Sbjct: 340 IQMANGLVIRGKPIKCSWGNKPT 362
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 48 QSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQFANR 101
Q E S + IFVG L V D L FS Y + ++ +G GFV F N+
Sbjct: 154 QREDTSGHFHIFVGDLSSEVNDATLYACFSVYTSCSDARVMWDNKTGRSRGYGFVSFRNQ 213
Query: 102 ENAEEALHKLNGTVIGKQSVRLSW 125
+ AE A+ ++ G +G + +R +W
Sbjct: 214 QEAETAITEMTGKWLGSRQIRCNW 237
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 53 SSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGC--GFVQFANRENAEEALHK 110
S+ +++VG + PNVT+ L + F G + K+ + GFV + +R +A A+
Sbjct: 74 STCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFGFVDYYDRRSAALAIMS 133
Query: 111 LNGTVIGKQSVRLSW 125
L+G I Q+++++W
Sbjct: 134 LHGRHIYGQAIKVNW 148
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGY-QQQYSSQGG------YASNGAPGQGPQS---- 49
++ M+G + SR +R A + + QQQ +Q G Y + P QG QS
Sbjct: 231 LSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHQFPTQGSQSYEMI 290
Query: 50 --EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEA 107
+ TT++VG L P T DL F +G + + +G F++ ENA A
Sbjct: 291 VQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAANA 350
Query: 108 LHKLNGTVIGKQSVRLSWGRN-PANKQF 134
+ +L+G + + ++ SWG++ P QF
Sbjct: 351 ICQLSGYQVNGRPLKCSWGKDRPPTGQF 378
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 32 SSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK 91
+S GG AP + + ++VGGLDP VT++ L+Q F G + SVKI K
Sbjct: 65 TSAGGQVRRAAP--------EPNKRALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIPDK 116
Query: 92 GC-------GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQW 142
GFV++ + AE A+ LNG + +Q +R++W +N + D N +
Sbjct: 117 NFQSKGYNYGFVEYDDPGAAERAMQTLNGRRVHQQEIRVNWAYQ-SNTSAKEDTSNHF 173
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 27 YQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVK 86
+QQ+ Y SN + E S++ IFVG L V DE L Q FS +G ++ +
Sbjct: 149 HQQEIRVNWAYQSNTS-----AKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEAR 203
Query: 87 IP------VGKGCGFVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGN 140
+ +G GF F +R AE+AL ++G +G +++R +W AN++ + +
Sbjct: 204 VMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNW----ANQKGQPSFSQ 259
Query: 141 QWSGAYYGGQVYDGYGY 157
Q + A G YG+
Sbjct: 260 QQAMAQMGMTPTTPYGH 276
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG 113
SN T++ GG+ +T++ +RQ FS +G+I +++ KG FV+F + E+A A+ +NG
Sbjct: 306 SNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNG 365
Query: 114 TVIGKQSVRLSWGR 127
T I V+ WG+
Sbjct: 366 TTIEGHVVKCYWGK 379
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
+FVG L P +T ED++ F+ +G I+ ++ KG GFV F N+ +AE A+ ++
Sbjct: 158 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 217
Query: 112 NGTVIGKQSVRLSWG-RNP 129
G +G + +R +W R P
Sbjct: 218 GGQWLGGRQIRTNWATRKP 236
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + LR+ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNPANK 132
FV F + +AE A+ +NG +G +S+R +W R P K
Sbjct: 139 YAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAK 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 54 SNTTIFVGGLDPNVTDEDLRQ-PFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLN 112
+NTT++ GG N+ E+L Q FSQ+G+I +++ KG F++F +E A A+ +
Sbjct: 206 TNTTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATH 265
Query: 113 GTVIGKQSVRLSWG 126
T I +V+ WG
Sbjct: 266 NTEISGHTVKCFWG 279
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 51 GDSSN-TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEE 106
GD S+ T++VG LDP+VT+ L F G++ KI P F++F A
Sbjct: 2 GDESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAAT 61
Query: 107 ALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
AL +N V+ + ++++W +P N Q + D N
Sbjct: 62 ALAAMNKRVVLDKEMKVNWATSPGN-QPKTDTSNH 95
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGK-----GCGFVQFANRENAEE 106
+ SN ++VGGL +V+DE L+ F+ G I SVKI K F++F N ++A+
Sbjct: 94 EVSNKILYVGGLHKSVSDEMLKDLFAVAGAIQSVKILNDKNRPGFNYAFIEFENTQSADM 153
Query: 107 ALHKLNGTVIGKQSVRLSWG 126
ALH LNG +I ++++W
Sbjct: 154 ALHTLNGRIINNSEIKINWA 173
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI------PVGKGCGFVQFANRENAE 105
D IFVG L P V DE L + FS++ + + +G GFV F + +AE
Sbjct: 185 DEPTFNIFVGDLSPEVDDETLNKSFSKFPSLKQAHVMWDMQTSRSRGYGFVSFGQQADAE 244
Query: 106 EALHKLNGTVIGKQSVRLSWG 126
AL +NG I +++R +W
Sbjct: 245 LALQTMNGEWISGRAIRCNWA 265
Score = 43.1 bits (100), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 23/126 (18%)
Query: 43 PGQGPQS------EGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFV 96
P PQS + S TT+++G + DL +G I K +GC FV
Sbjct: 347 PVMSPQSYDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFKFHPERGCAFV 406
Query: 97 QFANRENAEEALHKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQWSGAYYGGQVYDGYG 156
++ + E A A+ +L G I + ++ WG++ R G + +G
Sbjct: 407 KYDSHERAALAIVQLAGFTINGRPLKCGWGKD------RPPMGQ-----------FQNFG 449
Query: 157 YAIPPP 162
+PPP
Sbjct: 450 RGVPPP 455
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 1 MTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNTTIFV 60
+ EM G RP+ + +T + + G + + G P D T+F+
Sbjct: 207 LKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKKFGDV--------PSEPSD----TLFL 254
Query: 61 GGLDPNVTDEDLRQPFSQYGEIASVKIPVG------KGCGFVQFANRENAEEALHKLNGT 114
G L + ++L + F ++GEI SV+IP KG G+VQ+ N E+A++AL L G
Sbjct: 255 GNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDALQGE 314
Query: 115 VIGKQSVRLSW 125
I + VRL +
Sbjct: 315 SINDRPVRLDF 325
>gi|390598149|gb|EIN07547.1| hypothetical protein PUNSTDRAFT_69821 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1273
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 18/116 (15%)
Query: 23 KSSGYQQQYSSQGGYASNGAPGQGPQSEGDSSNT-----TIFVGGLDPNVTDEDLRQPFS 77
++S Y Q S+QG S P+SEG SS T ++++G LD +VT E L F+
Sbjct: 388 RASPYLQAPSNQGRAVS-------PKSEGSSSQTQTPTRSLWIGNLDSSVTSEQLIHVFA 440
Query: 78 QYGEIASVKIPVGKGCGFVQFANRENA----EEALHKLNGTV--IGKQSVRLSWGR 127
YG I S+++ K CGFV F + +A +E L++L G + Q+VR+ +G+
Sbjct: 441 PYGAIESLRLLPEKECGFVNFVDMADAIRAKDEVLNRLGGNIGMPNGQTVRIGFGK 496
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNG-TVI 116
+++G + T + FS YG I S ++ K CGF+ F ++A A LNG ++
Sbjct: 546 LWIGSIPSTTTPAAILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNGRDIL 605
Query: 117 GKQ--SVRLSWGRNPA 130
G ++R+ + + P
Sbjct: 606 GSDVGAIRIGFAKVPV 621
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 165 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 224
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 225 TIEGHVVKCYWGK 237
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 42 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 101
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 102 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 138
>gi|427796663|gb|JAA63783.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 965
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 43 PGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGC 93
P G GD + T +++G L+P +T+++L + F +YG +ASVKI + C
Sbjct: 183 PSLGSFDTGDPNTTNLYLGNLNPKMTEQELCEIFGRYGPLASVKIMWPRSQEERQRKRNC 242
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWGR 127
GFV + NR++ E A+ L+G + +++ WG+
Sbjct: 243 GFVAYMNRKDGERAIKHLSGQEVMGFEMKMGWGK 276
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
N T++ GG+ +TD+ +RQ FS +G+I +++ KG FV+F+ E+A A+ +NGT
Sbjct: 182 NCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGT 241
Query: 115 VIGKQSVRLSWGR 127
I V+ WG+
Sbjct: 242 TIEGHVVKCYWGK 254
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 40 NGAPGQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGC 93
N A Q + S++ +FVG L P +T ED++ F+ +G+I+ ++ KG
Sbjct: 59 NWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGY 118
Query: 94 GFVQFANRENAEEALHKLNGTVIGKQSVRLSWG-RNP 129
GFV F N+ +AE A+ + G +G + +R +W R P
Sbjct: 119 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 155
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 79 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 138
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
FV F + AE A++ +NG +G +S+R +W
Sbjct: 139 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 171
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 4 MNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGAPG-QGPQSEGDSSNTTIFVGG 62
MNG + SR +R +T + S + +++N P + ++ +N T++ GG
Sbjct: 157 MNGQWLGSRSIRTNWSTRKPPP----PRSERPRHSNNSKPNYEEVYNQSSPTNCTVYCGG 212
Query: 63 LDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVIGKQSVR 122
+TDE +++ FS +G I +++ KG F++F +E A A+ + T I V+
Sbjct: 213 FTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVK 272
Query: 123 LSWGR 127
WG+
Sbjct: 273 CFWGK 277
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD +V+++ L FSQ G + KI P FV+F N + A AL
Sbjct: 4 ESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 63
Query: 109 HKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
+N + ++++W +P N Q + D N
Sbjct: 64 AAMNKRSFLDKEMKVNWATSPGN-QPKLDTSNH 95
>gi|348584052|ref|XP_003477786.1| PREDICTED: RNA binding protein fox-1 homolog 1-like isoform 3
[Cavia porcellus]
Length = 326
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 39 SNGAPGQGPQ--SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKG 92
++G P P +E S + V + D DLRQ F Q+G+I V+I KG
Sbjct: 80 TDGQPQTQPSESTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG 139
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQ 150
GFV F N +A+ A KL+GTV+ + + + + R NK+ Y N W G
Sbjct: 140 FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA 199
Query: 151 VYDGYGYAIP 160
VY YA+P
Sbjct: 200 VYSPEFYAVP 209
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 45 QGPQSEGDSSNT-TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKGCGFVQ 97
QG ++ D++N +FVG L P VTD+ L + FS +G ++ ++ +G GF+
Sbjct: 65 QGTTNKEDTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRGYGFLA 124
Query: 98 FANRENAEEALHKLNGTVIGKQSVRLSW 125
F ++ +AE+A+ +NG +G +++R++W
Sbjct: 125 FRDKTDAEQAIATMNGEWLGSRAIRVNW 152
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%)
Query: 55 NTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGT 114
NTT++VG L T DL F G ++ ++I +G FV+ + E A A+ +L G
Sbjct: 243 NTTVYVGNLPSYATQSDLIPLFQTIGYVSEIRIQADRGFAFVKLESHEAAAAAIVQLQGH 302
Query: 115 VIGKQSVRLSWGRNPA 130
++ + ++ SWG++ A
Sbjct: 303 LVQGRPIKCSWGKDRA 318
>gi|255548712|ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
gi|223545356|gb|EEF46861.1| RNA binding protein, putative [Ricinus communis]
Length = 979
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 44 GQGPQSEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---------PVGKGCG 94
G+G +GD T ++VG L P V + L + F ++G IASVKI + CG
Sbjct: 173 GKGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEERRRQRNCG 232
Query: 95 FVQFANRENAEEALHKLNGTVIGKQSVRLSWGRNPA 130
FV F NR + + A ++ G V+ + +++ WG++ A
Sbjct: 233 FVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVA 268
>gi|291234161|ref|XP_002737018.1| PREDICTED: RNA binding motif protein 16-like [Saccoglossus
kowalevskii]
Length = 1381
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 56 TTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTV 115
TTIF+G L ++D+++ F ++G+I S+ I +GC FV R+++ +AL KL
Sbjct: 510 TTIFLGHLAKATGEKDIKEIFEEFGQIQSIDIIPPRGCAFVCMEQRQDSHKALQKLKNLK 569
Query: 116 IGKQSVRLSWGRNPANKQFRADYGNQW 142
+ ++++SW N K A+Y W
Sbjct: 570 LHGNTIKMSWATNKGTKG--AEYKKYW 594
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 40 NGAPGQGPQSEGDSSNTT-IFVGGLDPNVTDEDLRQPFSQYGEIASVKIP------VGKG 92
N A G Q + D+SN IFVG L P + + L++ F+ +GEI++ +I KG
Sbjct: 151 NWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKG 210
Query: 93 CGFVQFANRENAEEALHKLNGTVIGKQSVRLSW 125
FV F + AE A++ +NG +G +S+R +W
Sbjct: 211 YAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNW 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 57 TIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPVGKGCGFVQFANRENAEEALHKLNGTVI 116
++ GG +TDE +++ FS +G I +++ KG F++F +E A A+ + T I
Sbjct: 269 VLYCGGFTNGITDELIKKTFSPFGTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEI 328
Query: 117 GKQSVRLSWGR 127
V+ WG+
Sbjct: 329 NGSIVKCFWGK 339
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 52 DSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKI---PVGKGCGFVQFANRENAEEAL 108
+S+ T++VG LD V+++ L FSQ G + KI P FV+F N + A AL
Sbjct: 76 ESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATAL 135
Query: 109 HKLNGTVIGKQSVRLSWGRNPANKQFRADYGNQ 141
+N ++ ++++W +P N Q + D N
Sbjct: 136 AAMNKRSFLEKEMKVNWATSPGN-QPKLDTSNH 167
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 58 IFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV------GKGCGFVQFANRENAEEALHKL 111
I+VG L VTDE+LR F YGE++S K+ V KG GFV+ A +E+AE A+ ++
Sbjct: 3 IYVGNLSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKEM 62
Query: 112 NGTVIGKQSVRLSWGRNPANKQFRADYG 139
N + + + + ++ R P N+ FR G
Sbjct: 63 NDSDLKGRQIVVNQAR-PRNEGFRRSEG 89
>gi|345305359|ref|XP_001506712.2| PREDICTED: RNA binding protein fox-1 homolog 1 isoform 3
[Ornithorhynchus anatinus]
Length = 326
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 49 SEGDSSNTTIFVGGLDPNVTDEDLRQPFSQYGEIASVKIPV----GKGCGFVQFANRENA 104
+E S + V + D DLRQ F Q+G+I V+I KG GFV F N +A
Sbjct: 92 TENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADA 151
Query: 105 EEALHKLNGTVIGKQSVRL--SWGRNPANKQFRADYGNQWSGAYYGGQVYDGYGYAIP 160
+ A KL+GTV+ + + + + R NK+ Y N W G VY YA+P
Sbjct: 152 DRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAVP 209
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,517,676,612
Number of Sequences: 23463169
Number of extensions: 157877893
Number of successful extensions: 400342
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5267
Number of HSP's successfully gapped in prelim test: 18635
Number of HSP's that attempted gapping in prelim test: 361043
Number of HSP's gapped (non-prelim): 43970
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 72 (32.3 bits)