Query 029718
Match_columns 189
No_of_seqs 154 out of 341
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 03:27:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029718.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029718hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 98.8 2.9E-08 9.8E-13 95.0 11.4 100 7-109 101-215 (802)
2 2z86_A Chondroitin synthase; G 94.1 0.051 1.8E-06 49.0 4.9 44 39-87 96-139 (625)
3 3bcv_A Putative glycosyltransf 92.8 0.14 4.6E-06 39.5 4.8 47 39-91 8-54 (240)
4 1qg8_A Protein (spore coat pol 92.3 0.12 4.2E-06 40.2 4.0 45 39-89 4-48 (255)
5 1xhb_A Polypeptide N-acetylgal 92.0 0.16 5.4E-06 44.3 4.7 50 39-91 32-82 (472)
6 2ffu_A Ppgalnact-2, polypeptid 90.8 0.24 8.2E-06 43.8 4.6 46 39-87 69-114 (501)
7 3ckj_A Putative uncharacterize 88.6 0.48 1.6E-05 39.7 4.6 48 39-91 51-98 (329)
8 2d7i_A Polypeptide N-acetylgal 88.3 0.35 1.2E-05 44.1 3.9 45 39-86 115-159 (570)
9 2z86_A Chondroitin synthase; G 76.6 2 6.8E-05 38.6 3.9 47 39-91 378-424 (625)
10 1fo8_A Alpha-1,3-mannosyl-glyc 69.0 3.8 0.00013 35.9 3.8 42 39-85 5-46 (343)
11 3f1y_A Mannosyl-3-phosphoglyce 68.0 4 0.00014 35.9 3.7 48 39-91 97-146 (387)
12 3l7i_A Teichoic acid biosynthe 63.2 1.5 5.2E-05 40.8 0.0 48 39-92 5-52 (729)
13 4fix_A UDP-galactofuranosyl tr 51.9 4.1 0.00014 38.4 0.9 41 39-83 183-224 (657)
14 1lq7_A Alpha3W; three helix bu 37.4 18 0.00062 25.0 2.1 23 133-155 28-50 (67)
15 2bo4_A Mannosylglycerate synth 32.0 52 0.0018 29.1 4.7 46 40-92 4-49 (397)
16 2yy0_A C-MYC-binding protein; 30.0 57 0.0019 21.5 3.6 23 129-151 18-40 (53)
17 3ebr_A Uncharacterized RMLC-li 29.0 34 0.0012 26.5 2.7 36 74-113 119-154 (159)
18 4emt_A Transmembrane protein 1 24.2 10 0.00035 31.5 -1.2 59 57-115 74-152 (188)
19 1dwm_A LUTI, linum usitatissin 23.4 34 0.0011 23.3 1.5 19 62-80 43-61 (70)
20 4ef4_A Transmembrane protein 1 21.8 23 0.0008 30.8 0.5 46 70-115 126-191 (265)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=98.79 E-value=2.9e-08 Score=94.98 Aligned_cols=100 Identities=18% Similarity=0.073 Sum_probs=77.6
Q ss_pred chhhHHHHHHHHHhhc--------cccCCCCCcccCCCCC--CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEe
Q 029718 7 GHGLVCWELSYGLVFT--------GFLLKPLDGTVSTGAP--SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYL 76 (189)
Q Consensus 7 g~~l~~~E~~f~~~W~--------p~~r~~~~~~l~~~~p--DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~Yl 76 (189)
+.+++++|+++.+.|+ |+.|.+.++.-....| +|+|||+ ||++.++.+|+-|+++.+||.+++.|+|
T Consensus 101 ~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~P~VSViIPty---Ne~~~lL~~~L~Sl~~q~yp~~~~eIiV 177 (802)
T 4hg6_A 101 ALLLFAVETFSISIFFLNGFLSADPTDRPFPRPLQPEELPTVDILVPSY---NEPADMLSVTLAAAKNMIYPARLRTVVL 177 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCCCTTTCCCEEEEEECT---TCCHHHHHHHHHHHHTSSCCTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCccCCCcEEEEEEEC---CCCHHHHHHHHHHHHhccCCCCcEEEEE
Confidence 3567889998887665 5667777765555677 9999999 9999999999999999999999999999
Q ss_pred cCCCcchhhHH----HHHH-HHHHHHHhHHHHHHcCCc
Q 029718 77 SDDAAHDITFY----ALIE-ASHFAEHWIPYCKKFYVE 109 (189)
Q Consensus 77 sDDg~s~~t~~----al~E-Aa~Fa~~WvPfC~k~~v~ 109 (189)
.|||+++-|.+ .+.+ +.+-......+|+++++.
T Consensus 178 VDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~ 215 (802)
T 4hg6_A 178 CDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV 215 (802)
T ss_dssp ESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred EECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE
Confidence 99999998864 2333 222233445588888764
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=94.06 E-value=0.051 Score=49.02 Aligned_cols=44 Identities=11% Similarity=0.000 Sum_probs=37.8
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFY 87 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~ 87 (189)
.|+|+|+ ||+ ..+..|+-|++..+||. .+.++|.|||+++-|..
T Consensus 96 sviIp~~---n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~ 139 (625)
T 2z86_A 96 SIVIPTY---NRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEE 139 (625)
T ss_dssp EEEEEES---SCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHH
T ss_pred EEEEecC---CcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHH
Confidence 7999999 785 67889999999998876 89999999999986543
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=92.84 E-value=0.14 Score=39.47 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=39.0
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHHHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 91 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~al~E 91 (189)
.|.|||+ |++ ..+..++-|+++-.|| .+-+.|.|||.++-|...+.+
T Consensus 8 sViIp~y---n~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~ 54 (240)
T 3bcv_A 8 SVIVPIY---NVE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDD 54 (240)
T ss_dssp EEEEEES---SCT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHH
T ss_pred EEEEecC---CCH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHH
Confidence 7899999 665 5778999999999998 688999999999977655443
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.28 E-value=0.12 Score=40.21 Aligned_cols=45 Identities=13% Similarity=0.304 Sum_probs=37.3
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYAL 89 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~al 89 (189)
.|.|||+ |++ ..+..|+-|+++-.|| .+-+.|.|||.++-|...+
T Consensus 4 SViIp~y---n~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~ 48 (255)
T 1qg8_A 4 SVIMTSY---NKS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVI 48 (255)
T ss_dssp EEEEEES---SCT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHH
T ss_pred EEEEEcC---CCH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHH
Confidence 4789999 665 6788999999999998 6889999999998665433
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=91.95 E-value=0.16 Score=44.30 Aligned_cols=50 Identities=22% Similarity=0.040 Sum_probs=42.7
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchh-hHHHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDI-TFYALIE 91 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~-t~~al~E 91 (189)
.|.|+|+ ||+...+..||-|++...||....-+.|.|||.++- |...+.+
T Consensus 32 SVIIp~y---N~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~ 82 (472)
T 1xhb_A 32 SVVIVFH---NEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES 82 (472)
T ss_dssp EEEEEES---SCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH
T ss_pred EEEEEeC---CCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHH
Confidence 8999999 998788899999999999997778999999999973 6554443
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=90.75 E-value=0.24 Score=43.81 Aligned_cols=46 Identities=24% Similarity=0.169 Sum_probs=40.9
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFY 87 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~ 87 (189)
.|.|||+ ||....+..||-|++...||....-+.|.|||.++-|..
T Consensus 69 SVIIp~y---N~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~ 114 (501)
T 2ffu_A 69 SVVITFH---NEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG 114 (501)
T ss_dssp EEEEEES---SCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH
T ss_pred EEEEEeC---cCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH
Confidence 8999999 888778899999999999987677999999999987753
No 7
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=88.58 E-value=0.48 Score=39.72 Aligned_cols=48 Identities=13% Similarity=-0.076 Sum_probs=38.9
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHHHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 91 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~al~E 91 (189)
.|.|||| ||. ..+..++-|+++..|| ...-+.|.|||+++-|..-+.+
T Consensus 51 SViIp~y---N~~-~~l~~~l~sl~~q~~~-~~~eiivVDdgS~D~t~~~~~~ 98 (329)
T 3ckj_A 51 SVVLPAL---DEE-DTIGSVIDSISPLVDG-LVDELIVLDSGSTDDTEIRAVA 98 (329)
T ss_dssp EEEEEES---SCT-TTHHHHHHHHGGGBTT-TBSEEEEEECSCCSSHHHHHHH
T ss_pred EEEEeeC---CCH-HHHHHHHHHHHHhhCC-CCcEEEEEeCCCCchHHHHHHH
Confidence 8999999 665 4578899999999998 4578999999999977654443
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=88.27 E-value=0.35 Score=44.09 Aligned_cols=45 Identities=22% Similarity=0.131 Sum_probs=40.6
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITF 86 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~ 86 (189)
.|.|+|+ ||....+..||-|++...||....-|.|.|||.++-|.
T Consensus 115 SVIIp~y---Ne~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl 159 (570)
T 2d7i_A 115 SIIIPFH---NEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHL 159 (570)
T ss_dssp EEEEEES---SCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGG
T ss_pred EEEEEEC---CCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHH
Confidence 9999999 88878899999999999998766799999999999883
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=76.55 E-value=2 Score=38.63 Aligned_cols=47 Identities=23% Similarity=0.182 Sum_probs=39.1
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHHHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIE 91 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~al~E 91 (189)
.|.|+|+ |+. ..+..++-|++.-.|| .+-+.|.|||.++-|..-+.+
T Consensus 378 siii~~y---n~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~ 424 (625)
T 2z86_A 378 SIYIPAY---NCS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQE 424 (625)
T ss_dssp EEEEEES---SCT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHH
T ss_pred EEEEeCC---CCH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHH
Confidence 8999999 664 5778999999999997 588999999999977665544
No 10
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=69.00 E-value=3.8 Score=35.95 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=34.4
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhh
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDIT 85 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t 85 (189)
-|.|.|+ |-| . +..++-|++....+.++.-++|+|||...-|
T Consensus 5 pViI~~y---NRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 5 PILVIAC---DRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CEEEEES---SCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred cEEEEEC---CcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 3678888 777 5 8899999999887778888999999987533
No 11
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=68.01 E-value=4 Score=35.87 Aligned_cols=48 Identities=17% Similarity=0.001 Sum_probs=34.6
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhcc--CCCCCccEEEecCCCcchhhHHHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAY--DYPTEKLSVYLSDDAAHDITFYALIE 91 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~--dyP~~kl~~YlsDDg~s~~t~~al~E 91 (189)
.|.|||| ||. ..+..++-|+.+. +||.+ .-|.|.|||+++-|...+.+
T Consensus 97 SVVIP~y---Ne~-~~l~~~l~sl~~~l~~~~~~-~EIIVVDDgStD~T~~i~~~ 146 (387)
T 3f1y_A 97 SAVLPSR---NVA-DTVGGIIDEIHALNERAPLI-DQILVVDADSEDGTAGVAAS 146 (387)
T ss_dssp EEEEEES---SCT-TTHHHHHHHHHHHHHHSCCC-SEEEEEECSCSSSHHHHHHH
T ss_pred EEEEEcC---CCH-HHHHHHHHHHHHHHhcCCCC-eEEEEEcCcCCccHHHHHHH
Confidence 8999999 775 4456666666652 66643 68999999999977654433
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=63.17 E-value=1.5 Score=40.82 Aligned_cols=48 Identities=10% Similarity=0.073 Sum_probs=0.0
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHHHHHHH
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 92 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~al~EA 92 (189)
.|.|||+ |++ ..+..++-|+++-.|| .+-+.|.|||.++-|...+.+.
T Consensus 5 SVIIp~y---N~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~~ 52 (729)
T 3l7i_A 5 TIIVTYY---NAE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDEA 52 (729)
T ss_dssp ------------------------------------------------------
T ss_pred EEEEEcC---CCH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHHH
Confidence 6889999 665 5678899999999998 6789999999999877666553
No 13
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=51.85 E-value=4.1 Score=38.39 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=34.9
Q ss_pred CcEeeCCCCCCCChhHHHHhHHHhhccCCCCCcc-EEEecCCCcch
Q 029718 39 SRTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKL-SVYLSDDAAHD 83 (189)
Q Consensus 39 DvFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl-~~YlsDDg~s~ 83 (189)
.|.|+|+ |++ ..+..++-|+++-.|+.++. .|+|.|||.++
T Consensus 183 SVVIptY---N~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD 224 (657)
T 4fix_A 183 AVGIPTF---NRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERK 224 (657)
T ss_dssp EEECCBS---SCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSC
T ss_pred EEEEEec---CCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCC
Confidence 8999999 665 47889999999988877766 89999999875
No 14
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=37.43 E-value=18 Score=25.03 Aligned_cols=23 Identities=22% Similarity=0.342 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC
Q 029718 133 LAIKKLYEDMENGIITAAKLGRI 155 (189)
Q Consensus 133 ~~iK~~YEe~k~rIe~a~~~g~v 155 (189)
..+|+.+|++|.+|+.+-..|.|
T Consensus 28 eelkkkweelkkkieelggggev 50 (67)
T 1lq7_A 28 EELKKKWEELKKKIEELGGGGEV 50 (67)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSTH
T ss_pred HHHHHHHHHHHHHHHHhCCCcch
Confidence 45788999999999988766554
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=31.98 E-value=52 Score=29.12 Aligned_cols=46 Identities=20% Similarity=0.218 Sum_probs=28.1
Q ss_pred cEeeCCCCCCCChhHHHHhHHHhhccCCCCCccEEEecCCCcchhhHHHHHHH
Q 029718 40 RTGSHRDPKTEQPIMVINTVLSVMAYDYPTEKLSVYLSDDAAHDITFYALIEA 92 (189)
Q Consensus 40 vFV~T~DP~~Ep~~~~~nTvls~~a~dyP~~kl~~YlsDDg~s~~t~~al~EA 92 (189)
|.||++ +|-..-+...+..+. .+| ..-+.|.|||.++-|...+.+.
T Consensus 4 VIiP~~---eE~I~~vl~~l~~~~--~~~--~~EIIVVDDGStD~T~eia~~l 49 (397)
T 2bo4_A 4 VVFPFK---HEHPEVLLHNVRVAA--AHP--RVHEVLCIGYERDQTYEAVERA 49 (397)
T ss_dssp EEEECC---SSCHHHHHHHHHHHH--HST--TCCEEEEEESSCCHHHHHHHHH
T ss_pred EEEeCC---ccCHHHHHHHHHHhc--cCC--CeEEEEEECcCCccHHHHHHHh
Confidence 456765 454333333333222 234 3579999999999998877644
No 16
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=30.01 E-value=57 Score=21.51 Aligned_cols=23 Identities=4% Similarity=0.026 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 029718 129 AKGFLAIKKLYEDMENGIITAAK 151 (189)
Q Consensus 129 ~~e~~~iK~~YEe~k~rIe~a~~ 151 (189)
..|..++|.+.+++|.|++.+.+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~ 40 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVE 40 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Confidence 57788888888888888887653
No 17
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=29.04 E-value=34 Score=26.49 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=24.5
Q ss_pred EEecCCCcchhhHHHHHHHHHHHHHhHHHHHHcCCccCCc
Q 029718 74 VYLSDDAAHDITFYALIEASHFAEHWIPYCKKFYVEPRSP 113 (189)
Q Consensus 74 ~YlsDDg~s~~t~~al~EAa~Fa~~WvPfC~k~~v~pRaP 113 (189)
.|+.+||.-..+... ..|...|.-+|+++||.|+.=
T Consensus 119 ~~~~~~g~~~~~~d~----~~~~~~~~~~~~~~g~~~~~~ 154 (159)
T 3ebr_A 119 LYLDDKDNIIAVENW----KTSMDRYLNYCKAHGIRPKDL 154 (159)
T ss_dssp EEECTTCCEEEEECH----HHHHHHHHHHHHHTTCCCCCC
T ss_pred EecCCCCCEEEEcCH----HHHHHHHHHHHHHcCCCcccc
Confidence 577777765544433 244456667999999999864
No 18
>4emt_A Transmembrane protein 173; alpha/beta fold, innate immune sensor, C-DI-GMP, C-DI-AMP, M protein; HET: C2E; 1.50A {Homo sapiens} PDB: 4emu_A
Probab=24.16 E-value=10 Score=31.54 Aligned_cols=59 Identities=12% Similarity=0.211 Sum_probs=32.3
Q ss_pred HhHHHhhccCCCCCccEEEec-CCCcc-----------hhhHHHHHH--HHHHHH-----HhHHHHHHcC-CccCCccc
Q 029718 57 NTVLSVMAYDYPTEKLSVYLS-DDAAH-----------DITFYALIE--ASHFAE-----HWIPYCKKFY-VEPRSPGA 115 (189)
Q Consensus 57 nTvls~~a~dyP~~kl~~Yls-DDg~s-----------~~t~~al~E--Aa~Fa~-----~WvPfC~k~~-v~pRaP~~ 115 (189)
+..++--++....=|-+||-. |+|.. .+||++|.. .+.|.+ +|.-|||++. |-.++|++
T Consensus 74 ~~~i~RAGvk~RvyknsVY~I~~~~~~~~~cv~E~ATPL~Tl~~M~~~~~a~~sre~r~eq~~~F~r~L~~iL~~~pe~ 152 (188)
T 4emt_A 74 QQTGDHAGIKDRVYSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDILADAPES 152 (188)
T ss_dssp C---------CCCCCEEEEEEEETTEEEEEEEEEECTHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred ceeeccccccCcccccceeEEecCCCceeEEEEecCcHHHHHHHHhhccchhhhHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 344444455434448888866 44443 348998875 233333 8999999874 66677775
No 19
>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1
Probab=23.36 E-value=34 Score=23.32 Aligned_cols=19 Identities=21% Similarity=0.461 Sum_probs=16.5
Q ss_pred hhccCCCCCccEEEecCCC
Q 029718 62 VMAYDYPTEKLSVYLSDDA 80 (189)
Q Consensus 62 ~~a~dyP~~kl~~YlsDDg 80 (189)
++-+||-.++|.+||=++|
T Consensus 43 ~vT~Dfr~~RV~v~vD~~g 61 (70)
T 1dwm_A 43 AMTKDFRCDRVWVIVNDHG 61 (70)
T ss_dssp CCCCSCCTTEEEEEECTTS
T ss_pred ccCCccCCCeEEEEECCCC
Confidence 5678999999999998776
No 20
>4ef4_A Transmembrane protein 173; sting/MITA/ERIS/MPYS/TMEM173, innate immune system, type I interferon, dimerization, C-DI-GMP; HET: C2E; 2.15A {Homo sapiens} PDB: 4ef5_A 4f9e_A 4f9g_A* 4f5e_A* 4f5d_A* 4f5w_A 4f5y_A*
Probab=21.75 E-value=23 Score=30.83 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=31.4
Q ss_pred CccEEEecCCCcc------------hhhHHHHHH--HHHHH-----HHhHHHHHHcC-CccCCccc
Q 029718 70 EKLSVYLSDDAAH------------DITFYALIE--ASHFA-----EHWIPYCKKFY-VEPRSPGA 115 (189)
Q Consensus 70 ~kl~~YlsDDg~s------------~~t~~al~E--Aa~Fa-----~~WvPfC~k~~-v~pRaP~~ 115 (189)
=|-+||-.=++|. .+||+++++ .+.|. .+|.-|||++. |-.++|++
T Consensus 126 YknsVYkI~~~g~~~~~cv~E~ATPL~TL~~msq~~~a~~sr~~R~Eq~~lF~rtL~~ILe~~pEc 191 (265)
T 4ef4_A 126 YSNSIYELLENGQRAGTCVLEYATPLQTLFAMSQYSQAGFSREDRLEQAKLFCRTLEDILADAPES 191 (265)
T ss_dssp CCCEEEEEEETTEEEEEEEEEECTHHHHHHHHHTCGGGCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cccceEEEecCCCceeEEEEecCcHHHHHHHHhhccchhhhHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 4777776633333 469999886 22332 39999999974 66778886
Done!