BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029724
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/189 (92%), Positives = 185/189 (97%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKIIKLADKCVMASSGFQADV+ALQK+LA+RHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
GQLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 GQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSEAEA+DLVKTCFASATERDIYTGD+LEIV+LN GI
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDIYTGDRLEIVILNASGIR 214
Query: 181 REYMELRKD 189
RE MELRKD
Sbjct: 215 REEMELRKD 223
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/189 (91%), Positives = 184/189 (97%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI +LA+KCVMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLDNEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT FASATERDIYTGDK+EIV+LN GIH
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 214
Query: 181 REYMELRKD 189
REYM+LRKD
Sbjct: 215 REYMDLRKD 223
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 364 bits (934), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 172/189 (91%), Positives = 183/189 (96%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI +LA+KCVMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKISRLAEKCVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLDNEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT FASATERDIYTGDK+EIVVLN GI
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVVLNASGIR 214
Query: 181 REYMELRKD 189
REYM+L+KD
Sbjct: 215 REYMDLKKD 223
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 361 bits (927), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 171/189 (90%), Positives = 182/189 (96%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI LA+KCVMASSGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM
Sbjct: 43 MSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAM 102
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 103 AQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 162
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT FASATERDIYTGDK+EIV+LN GIH
Sbjct: 163 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIH 222
Query: 181 REYMELRKD 189
RE+M+LRKD
Sbjct: 223 REFMDLRKD 231
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 173/189 (91%), Positives = 180/189 (95%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI KLADKCVMASSGFQADV+ALQK LAARHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKICKLADKCVMASSGFQADVRALQKHLAARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV+TYDAVGSYE+VGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA DAVTPLSE EAVDLVKT FASATERDIYTGDKLEIV+LN GI
Sbjct: 155 LDNQLKSPSPLLLPALDAVTPLSEPEAVDLVKTVFASATERDIYTGDKLEIVILNASGIR 214
Query: 181 REYMELRKD 189
REYM+LRKD
Sbjct: 215 REYMDLRKD 223
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/189 (90%), Positives = 181/189 (95%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+R+YSKI +LA+K VMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTREYSKISQLAEKSVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSE EAVDLVKT FASATERDIYTGDKLEIV+LN GI
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSETEAVDLVKTVFASATERDIYTGDKLEIVILNASGIR 214
Query: 181 REYMELRKD 189
REYMELRKD
Sbjct: 215 REYMELRKD 223
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 170/188 (90%), Positives = 181/188 (96%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI LA+KCVMASSGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT FASATERDIYTGDK+EIV+LN GIH
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIH 214
Query: 181 REYMELRK 188
RE+M+LRK
Sbjct: 215 REFMDLRK 222
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 359 bits (921), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/189 (89%), Positives = 180/189 (95%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+R+YSKI KLADKCVMASSGFQADV+ALQK LAARHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTREYSKICKLADKCVMASSGFQADVRALQKQLAARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV TYDAVGSYE+VGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVLTYDAVGSYEKVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPL EAEA+DLVKT FASA+ERDIYTGDKLE+V++N GI
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLVEAEAIDLVKTVFASASERDIYTGDKLELVIINAAGIR 214
Query: 181 REYMELRKD 189
REYMELRKD
Sbjct: 215 REYMELRKD 223
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 169/189 (89%), Positives = 181/189 (95%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI LA+KCVMASSGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSE EAVDLVKT FASATERDIYTGDK+EIV+LN GIH
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 214
Query: 181 REYMELRKD 189
R++M+LRKD
Sbjct: 215 RDFMDLRKD 223
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/189 (89%), Positives = 181/189 (95%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI +LA+K VMASSGFQADV+ALQK L A+HLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKICQLAEKSVMASSGFQADVQALQKHLKAKHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
GQLLSNTLY+KRFFPYY+FNVLGGLD+EGKGCVYTYDAVGSYERVGYS+QGSGSTLIMPF
Sbjct: 95 GQLLSNTLYFKRFFPYYAFNVLGGLDSEGKGCVYTYDAVGSYERVGYSAQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSE EAVDLVKT FASATERDIYTGDK+EIVVLN DGI
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEPEAVDLVKTVFASATERDIYTGDKVEIVVLNADGIR 214
Query: 181 REYMELRKD 189
REYMELRKD
Sbjct: 215 REYMELRKD 223
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 351 bits (901), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 166/189 (87%), Positives = 179/189 (94%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGY+IL+RDYSKI KLADK V+ASSGFQADVKALQK L+ARHLIYQHQHNKQMSCPAM
Sbjct: 35 LSTGYNILTRDYSKICKLADKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYERVGYS+QGSGSTLI PF
Sbjct: 95 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQD+ TPLSEAEA+DLVKT FASATERDIYTGDKLEIVVLN DG+
Sbjct: 155 LDNQLKSPSPLLLPAQDSSTPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLR 214
Query: 181 REYMELRKD 189
REYM LR+D
Sbjct: 215 REYMNLRED 223
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 345 bits (886), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 175/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSIL+RDYSKI LADKCVMASSGFQADVKALQK L+ARHLIYQHQHNKQMSCPAM
Sbjct: 41 MSTGYSILTRDYSKICNLADKCVMASSGFQADVKALQKNLSARHLIYQHQHNKQMSCPAM 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV+TYDAVGSYERVGY +QG+G TL+MP
Sbjct: 101 AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAVGSYERVGYGAQGTGGTLMMPV 160
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDA TPLSE+EAVDLVK FASA ERDIYTGD LEIVV+N +G+
Sbjct: 161 LDNQLKSPSPLLLPAQDATTPLSESEAVDLVKDVFASAAERDIYTGDGLEIVVVNAEGVK 220
Query: 181 REYMELRKD 189
RE++ELR+D
Sbjct: 221 REFLELRRD 229
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/189 (85%), Positives = 176/189 (93%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI KLADKC+MASSGFQADVKALQK+L A+HLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLSNTLYYKRFFPYY+FNVL G D EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP
Sbjct: 95 ARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPL+EAEA+D+VK FASATERDIYTGDKLEIV++N DGI
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLTEAEAIDVVKDVFASATERDIYTGDKLEIVIVNADGIR 214
Query: 181 REYMELRKD 189
REY ELRKD
Sbjct: 215 REYAELRKD 223
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/189 (85%), Positives = 176/189 (93%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI KLADKC+MASSGFQADV+ALQK+L A+HLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKIYKLADKCLMASSGFQADVRALQKVLGAKHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLSNTLYYKRFFPYY+FNVL G D EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP
Sbjct: 95 ARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPAQDAVTPLSEAEA+D+VK FASATERDIYTGDKLEIV+LN DG+
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAIDVVKDVFASATERDIYTGDKLEIVILNADGMR 214
Query: 181 REYMELRKD 189
REY ELRKD
Sbjct: 215 REYAELRKD 223
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 342 bits (876), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 175/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSILSRDYSKI KLAD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM
Sbjct: 42 MSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAM 101
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLY+KRFFPYY+FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPF
Sbjct: 102 AQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPF 161
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLP QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L DGI
Sbjct: 162 LDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIK 221
Query: 181 REYMELRKD 189
E M+LRKD
Sbjct: 222 TELMDLRKD 230
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 341 bits (874), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 160/189 (84%), Positives = 175/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI KLADKC+MASSGFQADVKALQK+L A+HLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLSNTLYYKRFFPYY+FNVL G D EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP
Sbjct: 95 ARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA DAVTPL+EAEA+D+VK FASATERDIYTGDKLEIV++N DGI
Sbjct: 155 LDNQLKSPSPLLLPALDAVTPLTEAEAIDVVKDVFASATERDIYTGDKLEIVIVNADGIR 214
Query: 181 REYMELRKD 189
REY ELRKD
Sbjct: 215 REYAELRKD 223
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 175/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSILSRDYSKI KLAD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLY+KRFFPYY+FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPF
Sbjct: 95 AQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLP QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L DGI
Sbjct: 155 LDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIK 214
Query: 181 REYMELRKD 189
E M+LRKD
Sbjct: 215 TELMDLRKD 223
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 175/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS GYSIL+RDYSKI +LADK ++ASSGFQ D+KALQK LAA+HLIYQHQHNKQMSCPAM
Sbjct: 33 MSVGYSILTRDYSKICQLADKSILASSGFQGDIKALQKNLAAKHLIYQHQHNKQMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
GQLLSNTLYYKR PYY+FNVL GLDNEGKGCV+TYDAVGSYERVGYS+QGSGSTLIMP
Sbjct: 93 GQLLSNTLYYKRXXPYYAFNVLAGLDNEGKGCVFTYDAVGSYERVGYSAQGSGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE+EAVD+VK FASATERDIYTGD+LEIVV++ GI
Sbjct: 153 LDNQLKSPSPLLLPAKDAVTPLSESEAVDMVKDVFASATERDIYTGDRLEIVVIDASGIR 212
Query: 181 REYMELRKD 189
RE++ELRKD
Sbjct: 213 REFIELRKD 221
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 336 bits (861), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/189 (84%), Positives = 174/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSILSRDYSKI KLAD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLY+KRFFPYY+FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPF
Sbjct: 95 AQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLP QD+ TPLSEAEAVDLVKT FASATERDIYT +KLEI++L DGI
Sbjct: 155 LDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTVNKLEIMILKADGIK 214
Query: 181 REYMELRKD 189
E M+LRKD
Sbjct: 215 TELMDLRKD 223
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/189 (82%), Positives = 174/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTL+MP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLMMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTK 212
Query: 181 REYMELRKD 189
REY+ELRKD
Sbjct: 213 REYIELRKD 221
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/170 (92%), Positives = 167/170 (98%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI +LA+KCVMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLDNEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPF
Sbjct: 95 AQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPF 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 170
LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKT FASATERDIYTGDKL+
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKLK 204
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/189 (82%), Positives = 174/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLP +DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTM 212
Query: 181 REYMELRKD 189
REY++LRKD
Sbjct: 213 REYIDLRKD 221
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/189 (82%), Positives = 174/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTK 212
Query: 181 REYMELRKD 189
REY++LRKD
Sbjct: 213 REYIDLRKD 221
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 332 bits (851), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/189 (82%), Positives = 174/189 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI +L KCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICELXRKCVIASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCVY+YDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSYDAVGSYERTGYSAQGTGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE+EAVDLVK FASATERDIYTGDK+EIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDVFASATERDIYTGDKVEIVVINKAGTR 212
Query: 181 REYMELRKD 189
REY+ELRKD
Sbjct: 213 REYIELRKD 221
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/189 (82%), Positives = 173/189 (91%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KALQK LAAR L+YQ QHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALQKNLAARELLYQXQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLP +DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKGVFASATERDIYTGDKLEIVVINKAGTK 212
Query: 181 REYMELRKD 189
REY++LRKD
Sbjct: 213 REYIDLRKD 221
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/189 (82%), Positives = 173/189 (91%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGK CV+TYDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFTYDAVGSYERTGYSAQGTGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTK 212
Query: 181 REYMELRKD 189
REY++LRKD
Sbjct: 213 REYIDLRKD 221
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 329 bits (844), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/189 (81%), Positives = 172/189 (91%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+IL+RD+SKI +LADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE EAVDLVK FASATERDIYTGDKLEIVV+NK G
Sbjct: 153 LDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTK 212
Query: 181 REYMELRKD 189
REY++LRKD
Sbjct: 213 REYIDLRKD 221
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/189 (79%), Positives = 173/189 (91%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSRD+SKI +L+DKCV+ASSGFQ D+KALQK LAA+ LIY+H +NK+MSCPAM
Sbjct: 31 LSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQKALAAKELIYEHNNNKKMSCPAM 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVL GLD +GKGCV+TYDAVGSYER GYS+QG+GS L+MP
Sbjct: 91 AQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYDAVGSYERTGYSAQGTGSALMMPV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE++AVDLVK FASATERDIYTGD+LEIVV+NK G H
Sbjct: 151 LDNQLKSPSPLLLPARDAVTPLSESDAVDLVKDVFASATERDIYTGDRLEIVVINKSGTH 210
Query: 181 REYMELRKD 189
REY+ELRKD
Sbjct: 211 REYIELRKD 219
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 154/166 (92%), Positives = 163/166 (98%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS+GY+IL+RDYSKIIKLADKCV+ASSGFQADVKALQK+LAARHLIYQHQHNKQMSCPAM
Sbjct: 27 MSSGYNILTRDYSKIIKLADKCVLASSGFQADVKALQKVLAARHLIYQHQHNKQMSCPAM 86
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV+TYDAVGSY RVGYSSQGSGSTLIMPF
Sbjct: 87 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAVGSYGRVGYSSQGSGSTLIMPF 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
LD QLKSPSPLLLPA+DAVTPLSE+EA+DLVKTCF SATERDIYTG
Sbjct: 147 LDYQLKSPSPLLLPAKDAVTPLSESEAIDLVKTCFVSATERDIYTG 192
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 324 bits (831), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 151/189 (79%), Positives = 172/189 (91%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSRD SKI LADKCV+ASSGFQ DVKALQ+ LAA+ L+Y+H HNK+MSCPAM
Sbjct: 31 LSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRNLAAKELLYEHNHNKKMSCPAM 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+G+ L+MP
Sbjct: 91 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGAALMMPV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLS+++AVDLVK FASATERDIYTGDKLEIVV+N G H
Sbjct: 151 LDNQLKSPSPLLLPARDAVTPLSQSDAVDLVKDVFASATERDIYTGDKLEIVVINSAGSH 210
Query: 181 REYMELRKD 189
RE++ELRKD
Sbjct: 211 REFIELRKD 219
>gi|449525251|ref|XP_004169631.1| PREDICTED: proteasome subunit beta type-1-like, partial [Cucumis
sativus]
Length = 171
Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 162/171 (94%)
Query: 19 ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYS 78
ADK V+ASSGFQADVKALQK L+ARHLIYQHQHNKQMSCPAM QLLSNTLYYKRFFPYY+
Sbjct: 1 ADKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 60
Query: 79 FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 138
FNVLGGLD+EGKGCV+TYDAVGSYERVGYS+QGSGSTLI PFLDNQLKSPSPLLLPAQD+
Sbjct: 61 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDS 120
Query: 139 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
TPLSEAEA+DLVKT FASATERDIYTGDKLEIVVLN DG+ REYM LR+D
Sbjct: 121 STPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLRREYMNLRED 171
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/189 (79%), Positives = 170/189 (89%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSR +SKI LADKCV+ASSGFQ D+KALQK L A+ L+Y+H HNK+MSCPAM
Sbjct: 31 LSVGYSILSRAHSKIAHLADKCVLASSGFQGDIKALQKNLTAKELVYEHNHNKKMSCPAM 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+G+TL+MP
Sbjct: 91 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGATLMMPV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE+EAVDLVK FASATERDIYTGD +EIVV+N G H
Sbjct: 151 LDNQLKSPSPLLLPARDAVTPLSESEAVDLVKDVFASATERDIYTGDSVEIVVINSSGTH 210
Query: 181 REYMELRKD 189
RE +ELRKD
Sbjct: 211 RECIELRKD 219
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 150/189 (79%), Positives = 171/189 (90%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSRD SKI LADKCV+ASSGFQ DVKALQ+ L A+ L+Y+H HNK+MSCPAM
Sbjct: 31 LSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQRNLTAKELLYEHNHNKKMSCPAM 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+G+ L+MP
Sbjct: 91 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGAALMMPV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLS+++AVDLVK FASATERDIYTGDKLEIVV+N G H
Sbjct: 151 LDNQLKSPSPLLLPARDAVTPLSQSDAVDLVKDVFASATERDIYTGDKLEIVVINSAGSH 210
Query: 181 REYMELRKD 189
RE++ELRKD
Sbjct: 211 REFIELRKD 219
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 170/189 (89%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSRD+SKI +LADKCV+ASSGFQ D+KALQK L A+ LIY+H +NK+MSCPAM
Sbjct: 31 LSVGYSILSRDHSKIAQLADKCVLASSGFQGDIKALQKALTAKELIYEHNNNKKMSCPAM 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVL GLD +GKGCV+TYDAVGSYER GYS+QG+GS L+MP
Sbjct: 91 AQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYDAVGSYERTGYSAQGTGSALMMPV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE++AVDLVK FASATERDIYTGD+LEIVV+N G H
Sbjct: 151 LDNQLKSPSPLLLPARDAVTPLSESDAVDLVKDVFASATERDIYTGDRLEIVVINSSGTH 210
Query: 181 REYMELRKD 189
RE +ELRKD
Sbjct: 211 RECIELRKD 219
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 169/189 (89%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTG+SIL+RDYSKI ++ +KCV+ASSGFQADV++LQK L ARH IYQHQHNKQMSCPAM
Sbjct: 41 MSTGFSILTRDYSKIHQITEKCVLASSGFQADVRSLQKNLDARHQIYQHQHNKQMSCPAM 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLDNEGKGCVYTYDAVGSYER GYSSQGSG TLIMP
Sbjct: 101 AQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVYTYDAVGSYERSGYSSQGSGQTLIMPV 160
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKS SPL+LP +++ TPL+E EAVDL+K FASA ERDIYTGD +EIV++NKDGI
Sbjct: 161 LDNQLKSASPLVLPPRESSTPLTENEAVDLIKDTFASAAERDIYTGDGVEIVIINKDGIR 220
Query: 181 REYMELRKD 189
RE M L++D
Sbjct: 221 RETMPLKRD 229
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/189 (78%), Positives = 171/189 (90%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSRD+SKI +L+DKCV+ASSGFQ D+KALQK LAA+ LIY+H +NK+MSCPAM
Sbjct: 31 LSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQKALAAKELIYEHNNNKKMSCPAM 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVL GLD +GKGCV+TYDAVGSYER GYS+QG+GS L+MP
Sbjct: 91 AQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYDAVGSYERTGYSAQGTGSALMMPV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKSPSPLLLPA+DAVTPLSE++AVDLVK FASATERDIYTGD+LEIVV+N G H
Sbjct: 151 LDNQLKSPSPLLLPARDAVTPLSESDAVDLVKDVFASATERDIYTGDRLEIVVINSFGTH 210
Query: 181 REYMELRKD 189
RE +ELRKD
Sbjct: 211 RECIELRKD 219
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/189 (78%), Positives = 169/189 (89%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTG+SIL+RDYSKI + +KCV+ASSGFQADV++LQK L ARH IYQHQH+KQMSCPAM
Sbjct: 49 MSTGFSILTRDYSKIHHITEKCVLASSGFQADVRSLQKNLDARHQIYQHQHSKQMSCPAM 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER GYSSQGSG TLIMP
Sbjct: 109 AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERSGYSSQGSGQTLIMPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKS SPL+LP +++ TPL+E+EAVDL+K FASA ERDIYTGD +EIV++NK+GI
Sbjct: 169 LDNQLKSASPLVLPPRESSTPLTESEAVDLIKDTFASAAERDIYTGDGVEIVIINKEGIR 228
Query: 181 REYMELRKD 189
RE M L++D
Sbjct: 229 RETMALKRD 237
>gi|414589907|tpg|DAA40478.1| TPA: hypothetical protein ZEAMMB73_835212 [Zea mays]
Length = 188
Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 148/178 (83%), Positives = 163/178 (91%)
Query: 12 YSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYK 71
YS KLADKCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCPAM QLLSNTLYYK
Sbjct: 11 YSLHFKLADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYK 70
Query: 72 RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 131
RFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPL
Sbjct: 71 RFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPL 130
Query: 132 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
LLP +DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G REY++LRKD
Sbjct: 131 LLPVRDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTMREYIDLRKD 188
>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
Length = 178
Score = 308 bits (790), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/177 (81%), Positives = 159/177 (89%)
Query: 13 SKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKR 72
SK +ADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKR
Sbjct: 2 SKSKTIADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKR 61
Query: 73 FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 132
FFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLL
Sbjct: 62 FFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLL 121
Query: 133 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
LPA+DAVTPLSE EAVDLVK FASATERDIYTGDKLEIVV+NK G REY++LRKD
Sbjct: 122 LPARDAVTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 178
>gi|414886156|tpg|DAA62170.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 213
Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 154/169 (91%)
Query: 21 KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFN 80
+ +SSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM QLLSNTLYYKRFFPYY+FN
Sbjct: 45 RSATSSSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFN 104
Query: 81 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 140
VLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVT
Sbjct: 105 VLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVT 164
Query: 141 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
PLSE+EA+DLVK FASATERDIYTGDKLEIVV+NK G REY++LRKD
Sbjct: 165 PLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 213
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 297 bits (761), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/189 (74%), Positives = 160/189 (84%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+R +SK+ KL+D VMASSGFQADV+ LQK L AR Y HQH K MSCPAM
Sbjct: 38 LSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPAM 97
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD EGKGCVYTYDAVGSYER GYS+QGSG+ LIMP
Sbjct: 98 AQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPI 157
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKS SPLL P ++ TPL+E EA+++VK FASATER IYTGD LEIVV+NKDGIH
Sbjct: 158 LDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFASATERQIYTGDGLEIVVINKDGIH 217
Query: 181 REYMELRKD 189
+EY++L+KD
Sbjct: 218 KEYLDLKKD 226
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 159/189 (84%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+R +SK+ KL+D VMASSGFQADV+ LQK L AR Y HQH K MSCP M
Sbjct: 38 LSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPGM 97
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD EGKGCVYTYDAVGSYER GYS+QGSG+ LIMP
Sbjct: 98 AQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPI 157
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKS SPLL P ++ TPL+E EA+++VK FASATER IYTGD LEIVV+NKDGIH
Sbjct: 158 LDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFASATERQIYTGDGLEIVVINKDGIH 217
Query: 181 REYMELRKD 189
+EY++L+KD
Sbjct: 218 KEYLDLKKD 226
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 159/189 (84%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+R +SK+ KL+D VMASSGFQADV+ LQK L AR Y HQH K MSCP M
Sbjct: 38 LSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPGM 97
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYYSFNVLGGLD EGKGCVYTYDAVGSYER GYS+QGSG+ LIMP
Sbjct: 98 AQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPI 157
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLKS SPLL P ++ TPL+E EA+++VK FASATER IYTGD LEIVV+NKDGIH
Sbjct: 158 LDNQLKSASPLLYPPRETATPLTEQEALEIVKDTFASATERQIYTGDGLEIVVINKDGIH 217
Query: 181 REYMELRKD 189
+EY++L+KD
Sbjct: 218 KEYLDLKKD 226
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/165 (83%), Positives = 153/165 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPV 152
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 165
LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYT
Sbjct: 153 LDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYT 197
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/165 (80%), Positives = 147/165 (89%), Gaps = 6/165 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FNVL GKGCV+TYDAVGSYER GYS+QG+GSTLIMP
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVL------GKGCVFTYDAVGSYERTGYSAQGTGSTLIMPV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 165
LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYT
Sbjct: 147 LDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYT 191
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 275 bits (704), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 154/189 (81%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYS+L+RDY KI K+ +KCVMAS+GF AD L+K L AR + Y+ Q+NK+M C +
Sbjct: 32 MSTGYSVLTRDYKKIEKMTEKCVMASAGFMADAVTLKKTLKARCVSYEFQNNKEMGCVSF 91
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLYY+RFFPYY+FN++ GLD EGKG V+TYDAVGSYER YS QGSG LIMP
Sbjct: 92 AQMLSNTLYYRRFFPYYTFNIVAGLDKEGKGAVFTYDAVGSYERTNYSCQGSGQGLIMPV 151
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL+LPAQ + TPLSE+EAVDLVK CFA+A ERDIYTGD +EI ++NKDG+
Sbjct: 152 LDNQLKTVSPLVLPAQSSATPLSESEAVDLVKDCFATAGERDIYTGDSVEIWIINKDGLR 211
Query: 181 REYMELRKD 189
+EY +L+ D
Sbjct: 212 KEYQDLKLD 220
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/189 (65%), Positives = 153/189 (80%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDY KI +++DKCV+AS+GF AD L+K L AR Y+ Q++K M C +
Sbjct: 41 MSTGYNILTRDYKKIDQMSDKCVLASAGFMADAVTLKKTLKARCTTYEFQNDKPMGCVSF 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLYY+RFFPYY+FN++ GLD EGKG V+TYDAVGSYER YS QGSG LIMP
Sbjct: 101 AQMLSNTLYYRRFFPYYTFNIVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQGLIMPV 160
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL+LPAQ + TPLSE+EAVDLVK CFA+A ERDIYTGD +EI ++NKDG+
Sbjct: 161 LDNQLKTVSPLVLPAQSSATPLSESEAVDLVKDCFATAGERDIYTGDTVEIWIINKDGVR 220
Query: 181 REYMELRKD 189
+EY EL+ D
Sbjct: 221 KEYQELKLD 229
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 147/189 (77%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSIL+R+ SKI++L KCV+AS+G QAD + L K+L +RH+ YQ H K M+CPAM
Sbjct: 51 MSTGYSILTRNKSKILQLNPKCVIASAGMQADQETLHKVLHSRHVTYQFNHRKPMACPAM 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYYKRFFPYY+FN+ GLD+EG+G VYTYDA+GSYERVGY QG+G L+ P
Sbjct: 111 AQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAVYTYDAIGSYERVGYGCQGNGKELVQPV 170
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL LP Q ++ L +AVDLVK F SA ERDIYTGD +EI+++ KD I
Sbjct: 171 LDNQLKAASPLALPPQQWLSSLPLEQAVDLVKGAFVSAGERDIYTGDDVEILIITKDCIK 230
Query: 181 REYMELRKD 189
+ +EL++D
Sbjct: 231 TDRLELKRD 239
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 146/189 (77%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSI++R Y+K+ +++ K +MAS+GF AD L+KLL R YQ +NK + C A
Sbjct: 55 MSTGYSIMTRQYTKVDEMSPKTLMASAGFMADAATLKKLLKGRCDQYQFANNKPIGCVAF 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLY +RFFPYY+FN++ GLD EGKG V+TYDAVGSYER YS QGSG LIMP
Sbjct: 115 AQMLSNTLYMRRFFPYYAFNIVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQQLIMPV 174
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL+LPA + TPLSE EA+DL+K CFA+A ERDIYTGD +E+ V+NKDGI
Sbjct: 175 LDNQLKTVSPLVLPAVSSATPLSEEEAIDLIKDCFATAGERDIYTGDAVELFVMNKDGIR 234
Query: 181 REYMELRKD 189
+E M L+ D
Sbjct: 235 KETMPLKTD 243
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 148/189 (78%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSIL+R+Y K+ +++ K +MAS+GF AD + L+K L AR Y+ Q+ K + C +
Sbjct: 39 MSTGYSILTRNYEKVDQMSPKTLMASAGFMADAQTLKKTLKARCKQYEFQNKKPIGCVSF 98
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLYY+RFFPYY+FN++ GLD EGKG V+TYDAVGSYER YS QGSG LIMP
Sbjct: 99 AQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQALIMPV 158
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL+LPA + TPLSEA A++L+K CFA+A ERDIYTGD++E+ ++N DG+
Sbjct: 159 LDNQLKTVSPLVLPAVSSATPLSEAAAIELIKDCFATAAERDIYTGDRVELWIMNADGVR 218
Query: 181 REYMELRKD 189
+E M LR D
Sbjct: 219 KEEMPLRLD 227
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 146/189 (77%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS+GY+IL+R + KI K++ K +MAS+GF AD L+K L AR Y+ Q+ +++ C A
Sbjct: 45 MSSGYNILTRKFEKIDKMSGKTLMASAGFAADAVTLKKTLKARCKQYEFQNKREIGCVAF 104
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLYY+RFFPYY+FN++ GLD EGKG V+TYDAVGSYER YS QGSG LIMP
Sbjct: 105 AQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQALIMPV 164
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL+LPA + TPLSE EA+DL+K CFA+A ERDIYTGD +E+ ++N +G+
Sbjct: 165 LDNQLKTVSPLVLPAASSATPLSEQEAIDLIKDCFATAAERDIYTGDSVELWIMNAEGVR 224
Query: 181 REYMELRKD 189
+E M LR D
Sbjct: 225 KEEMALRAD 233
>gi|414886162|tpg|DAA62176.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 135
Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 127/135 (94%)
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MSCPAM QLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS
Sbjct: 1 MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGS 60
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
TLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK FASATERDIYTGDKLEIVV+
Sbjct: 61 TLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVI 120
Query: 175 NKDGIHREYMELRKD 189
NK G REY++LRKD
Sbjct: 121 NKVGTKREYIDLRKD 135
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 141/189 (74%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SILSRD S ++KL+DK ++ S GFQAD K L K+L R++ YQ H + MS A
Sbjct: 61 LSTGFSILSRDVSMVLKLSDKLMILSPGFQADAKTLHKVLQQRYIRYQFDHGRPMSVAAC 120
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLL NTLYYKRFFPYY+FN+ GLD EGKG VY+YDA+GS+ER GY+ QGSG LI P
Sbjct: 121 AQLLGNTLYYKRFFPYYTFNICAGLDEEGKGAVYSYDAIGSHERSGYAVQGSGKDLIQPV 180
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK+ SPL+LP ++ ++ L +AVDLV+ F SA ERDIYTGD +EI ++ +G
Sbjct: 181 LDNQLKAASPLVLPPENWMSSLPLDQAVDLVRDAFVSAGERDIYTGDAVEIYIMTMEGTK 240
Query: 181 REYMELRKD 189
RE +EL+KD
Sbjct: 241 REVLELKKD 249
>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
Length = 241
Score = 225 bits (573), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 139/189 (73%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+S+LSR++S + +L+ CV+ASSGF+ D L K L +R ++YQH H + + C AM
Sbjct: 53 LSTGFSVLSREHSSLHQLSRMCVLASSGFEGDRATLTKRLKSRAVMYQHSHKRPIGCEAM 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q LSN LY KRFFP+Y+FN+L GLD +G G VY+YDAVGSYER GY++QG+G+ L+ P
Sbjct: 113 AQALSNELYGKRFFPFYTFNILAGLDADGTGAVYSYDAVGSYERTGYAAQGTGNDLVQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL++ SPL+LP + +VT L A+D+V+ +A ERDIYTGD +E+ ++ KDGI
Sbjct: 173 LDNQLRAASPLVLPKKPSVTALPVERALDIVRDALTAAGERDIYTGDSIEVWIMTKDGIR 232
Query: 181 REYMELRKD 189
+E L+ D
Sbjct: 233 KESTPLKTD 241
>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
Length = 212
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTG+SIL+RD S +++L DK V+AS+G QAD KAL KLL R++ YQH H + M A
Sbjct: 32 MSTGFSILTRDASMLLQLTDKVVVASAGMQADRKALHKLLQHRNVTYQHNHGRAMGVSAA 91
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYY RFFP Y+FN++ GLD +G+G VY YDA+GSYER GY QGSG LI P
Sbjct: 92 AQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNYDAIGSYERSGYFCQGSGKELIQPV 151
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ L+ P D P A+DLVK F SA ERDIYTGDK+EI+++ KDGI
Sbjct: 152 LEGILRRP--------DVHVPFRTCMALDLVKDAFVSAGERDIYTGDKVEILIITKDGIK 203
Query: 181 REYMELRKD 189
RE ++L+ D
Sbjct: 204 REELQLKLD 212
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS GYSI +R +K+ KL DKCV+AS+G Q+D L K+L R + Y+HQH K MS A+
Sbjct: 39 MSLGYSIQTRKSTKLCKLTDKCVIASAGMQSDAATLHKVLKMRLVEYEHQHGKPMSVVAV 98
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
GQ+LSN LY +RFFPYY+FN++ GLD +GKG V++YDA+GSY+ V SQGSG TLI P
Sbjct: 99 GQMLSNMLYNRRFFPYYTFNLVAGLDTDGKGIVFSYDAIGSYQSVEVGSQGSGQTLIQPL 158
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + LL+P D L+ +++ +VK F SA ERDIYTGD +EI+++ K+GI
Sbjct: 159 LDNQVAFKNHLLVPNTD----LTLEQSLSIVKDAFTSAGERDIYTGDSVEILIITKEGIK 214
Query: 181 REYMELRKD 189
E +EL+KD
Sbjct: 215 TEILELKKD 223
>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 131/189 (69%), Gaps = 3/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGYSI SR+ K++KL DKCV+A++G QAD AL KLL R Y+HQH K MS PA+
Sbjct: 51 LSTGYSIHSREARKVLKLTDKCVIATAGMQADQLALHKLLQTRLQWYEHQHRKPMSTPAI 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L+ LY KRFFP+Y+FNVLGG+D+ G GCVY+YDAVGS+ERV YSS G+G+ L+ P
Sbjct: 111 AQMLATILYSKRFFPFYTFNVLGGVDDNGVGCVYSYDAVGSFERVKYSSSGTGNQLVQPL 170
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ A L+ E VD V+ F SA ERDIYTGD + I V++KDG+
Sbjct: 171 LDNQIGWKDQR---ATKTKPELNVEETVDFVRDIFTSAGERDIYTGDYVLIAVIDKDGVK 227
Query: 181 REYMELRKD 189
+L++D
Sbjct: 228 EMKFDLKQD 236
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 130/189 (68%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSI+SRD +K+ +L KCV+AS+G + DV L K L +Y H K+M+ PA+
Sbjct: 68 MSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAV 127
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L+NTLYY+RFFPYYSFNVL GLD +GKG V++YDA+GS+ERV YS+ GSG T I+P
Sbjct: 128 AQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPL 187
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ +D S AE V+LVK +A ERDIYTGD +EI +++KDG
Sbjct: 188 LDNLVE-----FKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTS 242
Query: 181 REYMELRKD 189
+ L+KD
Sbjct: 243 TQMFPLKKD 251
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 129/186 (69%), Gaps = 3/186 (1%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY I +R Y+K+ +L +KCV+A+SG QAD ALQK L YQ +H K MS PA+ Q
Sbjct: 54 GYGIQTRHYTKVFQLTNKCVLATSGMQADTIALQKRLKLMLETYQKEHGKPMSTPAIAQF 113
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LSNTLYYKRFFPYY+FN++ G+D +G+G ++TYDAVGS+ERV YSSQGSG+ L++P LDN
Sbjct: 114 LSNTLYYKRFFPYYTFNLVAGVDEKGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDN 173
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q+ + ++ V S + V VK SA ERDIYTGD +IVV++KDG+ E
Sbjct: 174 QVAKRNQQIIQGNGDV---SCDQVVSFVKDAITSAGERDIYTGDFADIVVVDKDGVRWEK 230
Query: 184 MELRKD 189
EL+ D
Sbjct: 231 FELKLD 236
>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
Length = 236
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY I +R Y+KI +L KCV+A+SG QAD ALQK L + ++ +H K MS PA+ Q
Sbjct: 54 GYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQF 113
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LSNTLYYKRFFPYY+FN++ G+D +G+G ++TYDAVGS+ERV YSSQGSG+ L++P LDN
Sbjct: 114 LSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDN 173
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q+ + ++ V S + V VK SA ERDIYTGD +IVV++K+G+H E
Sbjct: 174 QVAKFNQQIVEGNKDV---SCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEK 230
Query: 184 MELRKD 189
EL+ D
Sbjct: 231 FELKLD 236
>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
Length = 236
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 130/186 (69%), Gaps = 3/186 (1%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY I +R Y+K+ KL DKCV+A+SG QAD AL+K L + Y+ H K MS PA+ Q
Sbjct: 54 GYGIQTRHYTKVFKLTDKCVIATSGMQADTIALRKRLDTQLRQYERDHGKSMSTPAIAQF 113
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LSNTLY+KRFFP+Y+FN++ G+D +G GCV+TYDAVGS+ERV +SSQGSG+ LI P LDN
Sbjct: 114 LSNTLYHKRFFPFYTFNLVAGVDEDGIGCVWTYDAVGSHERVRFSSQGSGNQLIQPLLDN 173
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q+ + ++ D LS +A+ LVK SA ERDIYTGD +IV +++ G+H E
Sbjct: 174 QVGKFNQQIV---DGPRELSAEQALSLVKDAITSAGERDIYTGDFADIVTIDQKGVHFEK 230
Query: 184 MELRKD 189
+L+ D
Sbjct: 231 FDLKLD 236
>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
Length = 235
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 126/186 (67%), Gaps = 3/186 (1%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY I +R Y+KI +L +KCV+A+SG QAD AL+K L YQ +H K MS PA+ Q
Sbjct: 53 GYGIQTRQYTKIFQLTNKCVIATSGMQADTLALRKRLETVLSRYQKEHGKPMSTPAISQY 112
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LSNTLY KRFFPYY+FN++ G+D +G GC++TYDAVGS+ERV SSQGSG+ L+ P LDN
Sbjct: 113 LSNTLYQKRFFPYYTFNLVCGVDEDGVGCIWTYDAVGSHERVKMSSQGSGNQLVQPLLDN 172
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q+ + ++ D LS +AV L K SA ERDIYTGD +IVV+N G+H E
Sbjct: 173 QVGKFNQRIV---DGPRELSSEQAVSLAKDAITSAGERDIYTGDFADIVVINSTGVHWEK 229
Query: 184 MELRKD 189
L+ D
Sbjct: 230 FNLKLD 235
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 130/189 (68%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY ILSR+ SK+ L +CV+ S+G + DV L+ +L + +Y H H K M+ P++
Sbjct: 100 LSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSV 159
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L NTLYYKRFFPYYSFNVL G+D+EGKG VY+YDA+GS+ER +S+ GSG + ++P
Sbjct: 160 AQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPL 219
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+DN + + L D L E V++VK F +A ERDIYTGD ++I+V+ KDGI
Sbjct: 220 MDNVISHKNRL-----DERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGID 274
Query: 181 REYMELRKD 189
++ +L+ D
Sbjct: 275 KQTFQLKAD 283
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY ILSR+ SK+ L +KCV+ S+G + DV L+ +L + +Y H H K M+ P++
Sbjct: 97 LSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSV 156
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L NTLY KRFFPYYSFNVL G+D+EGKG VY+YDA+GS+ER +S+ GSG ++P
Sbjct: 157 AQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPL 216
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+DN + + L D L E V++VK F +A ERDIYTGD +EI+V+ GI
Sbjct: 217 MDNVISHKNRL-----DQKRELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIE 271
Query: 181 REYMELRKD 189
E +L+ D
Sbjct: 272 SETFKLKAD 280
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 1/190 (0%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI SR+++KI++L D+ V+AS+G AD + L K+L +R IY++QH K+MS A+
Sbjct: 55 LSVGFSIPSRNFTKIVQLTDQAVLASAGMGADRQYLHKILRSRLEIYRYQHQKEMSLGAI 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLD-NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
QLLSNTLY +RFFP Y+FNVLGG+D N G+G V+ YDA+GS+E+V GSG TL+ P
Sbjct: 115 AQLLSNTLYSRRFFPIYAFNVLGGIDANTGEGFVFGYDAIGSFEKVKVVCSGSGQTLVQP 174
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LD QL +P + LS AEA++L + F SA ERDI TGD LE+ + G+
Sbjct: 175 VLDQQLAGRQKYDVPDDQRMASLSLAEAIELTRDVFNSAAERDILTGDALELYAVTASGV 234
Query: 180 HREYMELRKD 189
E ELR+D
Sbjct: 235 RCERFELRRD 244
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 129/191 (67%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ I SRD SKI KL +K + + GFQ DV L +LL AR +Y+ +H K+MS A+
Sbjct: 51 LSEGFMIHSRDTSKIYKLTEKTFLGTCGFQGDVLTLTRLLNARLTMYEFEHRKKMSSTAI 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYY+RFFPYY+FN+L G+D +GKGC+Y+YDAVG+YE+ Y + G+ S+++ P
Sbjct: 111 SQMLSTVLYYRRFFPYYTFNILAGIDTDGKGCIYSYDAVGNYEKHTYHASGTASSMLQPL 170
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V PL+ +A L+K F SATERD+YTGD L IV + DG
Sbjct: 171 LDNQVGYLN------QEGVRRVPLTIDKARTLIKDVFISATERDMYTGDSLHIVTITSDG 224
Query: 179 IHREYMELRKD 189
+ ++ LR+D
Sbjct: 225 VTEDHFPLRRD 235
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 124/189 (65%), Gaps = 3/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y I +R+ K L+DK V+AS GF DV L K + R Y+HQH K M+ A+
Sbjct: 53 LSEYYGIHTRNCPKTFVLSDKTVLASCGFHGDVLTLTKNIFTRLRKYEHQHEKTMATHAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLYY+RFFP+Y++NV+GGLD GKG VY+YD VGSYER Y + G+ S L+ P
Sbjct: 113 AQMLSNTLYYRRFFPFYTYNVIGGLDESGKGAVYSYDPVGSYERESYRAAGTASALLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL + L PL+ A AV +VK FA+ATERDIYTGD ++I V+ +G+
Sbjct: 173 LDNQLGYKN---LAPNVPRPPLTVARAVAIVKDVFAAATERDIYTGDSVDIQVITSEGVA 229
Query: 181 REYMELRKD 189
E ELRKD
Sbjct: 230 TERYELRKD 238
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ KL+D+ V+ ++G D L +LL AR +Y+H+HNK MS PA+
Sbjct: 48 LSTGFSIYTREQKKLFKLSDRTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMSTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY NVL GLD EGKGCVY+YD +G ER Y + GS + P
Sbjct: 108 AQMLSTMLYYKRFFPYYISNVLAGLDAEGKGCVYSYDPIGHCERSNYRAGGSAGAQLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ L VT PLS +A+ L+K F SA ERDIYTGD + I+++ +G
Sbjct: 168 LDNQIG------LKNMQNVTEAPLSREKALALLKDVFISAAERDIYTGDSIYILIITANG 221
Query: 179 IHREYMELRKD 189
I E ELRKD
Sbjct: 222 IQEEKFELRKD 232
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY I +RD SK+ KL+DKC++ S G D+ + L AR +Y H+H+K MS PA+
Sbjct: 48 LSAGYHIYTRDQSKLFKLSDKCILGSGGCWCDILTFTRFLEARMKMYLHEHHKPMSTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QL+ LY+KRFFPYY N+L GLD EGKGC+Y+YD VG ERV Y S GSGS L+ P
Sbjct: 108 AQLIVTMLYHKRFFPYYISNILAGLDEEGKGCIYSYDPVGHCERVQYRSGGSGSALLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+Q+ + + AV P E A+ ++K F SA ERD+YTGD + + +++KDG+H
Sbjct: 168 LDSQIGFKNQV---GAVAVPPTRE-RAISIIKDVFISAAERDMYTGDSVIVNIIDKDGVH 223
Query: 181 REYMELRKD 189
E LR+D
Sbjct: 224 EERFPLRRD 232
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SR+ K KL DK V+ SGF AD L K++ AR +Y+H +NK M+ A+
Sbjct: 21 LSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAI 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 81 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPL 140
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + +P + V PL+ +A+ LVK F SATERD+YTGD L+I ++ K+GI
Sbjct: 141 LDNQIGYKN---MPNAEQV-PLTLEKAIKLVKDVFISATERDVYTGDSLKISIVTKEGIR 196
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 197 EESLSLRKD 205
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 188 bits (478), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ I +RD K+ KL V+ SGF D L K ++AR +Y+H H K MSC A+
Sbjct: 45 LSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDCLTLTKHISARLQMYEHDHGKAMSCTAI 104
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYY+RFFPYY++N+L GLD+EGKGCV+++D VGSYER Y + GS S L+ P
Sbjct: 105 AQMLSTMLYYRRFFPYYTYNILAGLDSEGKGCVFSFDPVGSYEREVYRAGGSASALLQPL 164
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + +P TPL+ +AV LVK F SA ERDIYTGD + I V++ +G+
Sbjct: 165 LDNQIGFKNQEGVPH----TPLTRDKAVALVKDVFTSAAERDIYTGDAVIINVVSSEGVS 220
Query: 181 REYMELRKD 189
E LR+D
Sbjct: 221 EEAFPLRRD 229
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S +SILSRD K KL D V+ GF DV L K+L AR Y+H+HNK MSC ++
Sbjct: 51 LSEYFSILSRDSPKRYKLTDMTVLGCCGFHGDVLTLTKMLDARLKNYKHEHNKTMSCKSI 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LYY+RFFPYY++N+L GLD EGKGCVY++D +GSYER Y + GS S L+ P
Sbjct: 111 AAMLSTVLYYRRFFPYYTYNILAGLDEEGKGCVYSFDPIGSYEREVYRAGGSASALLQPL 170
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V P+ + +AV LVK F SA ERDIYTGD++ I V+ KDG
Sbjct: 171 LDNQIG------MKNMQGVQRLPVPKEKAVALVKDVFISAAERDIYTGDQIIINVITKDG 224
Query: 179 IHREYMELRKD 189
I E LR+D
Sbjct: 225 IQEESFPLRRD 235
>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
Length = 246
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 124/189 (65%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI SR SKI KL DK V+A+SG QAD L LL R Y HQH S A+
Sbjct: 63 LSTGFSIYSRFQSKITKLTDKVVLATSGMQADKTTLHNLLQIRIEQYTHQHRHPPSLNAI 122
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFP+Y+FNVL G+D GKG VY YDA+GS+E Y+ G+G+ LIMP
Sbjct: 123 AQLLSTMLYSRRFFPFYTFNVLCGIDENGKGAVYGYDAIGSFEAARYNCAGTGAHLIMPV 182
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + Q PL+ + VD++K+ ASA ERDI+TGD+ E+V++++ GI
Sbjct: 183 LDNQISRNN-----QQGEKAPLTREQVVDIIKSAVASAGERDIFTGDQAEVVMISQSGIE 237
Query: 181 REYMELRKD 189
+ M+LR D
Sbjct: 238 KTLMDLRAD 246
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI SR+ K KL DK V+AS+GF DV K+L AR +Y+H+H K+MS A+
Sbjct: 45 LSEGFSIHSRNAPKTYKLTDKTVLASAGFHGDVLTEIKVLEARLKMYEHEHGKKMSSQAI 104
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+L+ LY+KRFFPYY +N++GGLD EGKGCVY+YD VGSYER Y + GS L+ P
Sbjct: 105 AAMLATILYHKRFFPYYVYNIIGGLDEEGKGCVYSYDPVGSYEREVYRAGGSAGPLLQPL 164
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ Q V LS+ +A+ L+K F SA ERDIYTGD L + V+ K+G
Sbjct: 165 LDNQIG------FKNQQGVEKVSLSKDKAIKLIKDIFISAAERDIYTGDSLHLKVVTKEG 218
Query: 179 IHREYMELRKD 189
+ E LR+D
Sbjct: 219 VSEETFPLRRD 229
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 123/189 (65%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI SR SKI KL DK V+A+SG +AD L LL R Y HQH S A+
Sbjct: 178 LSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAI 237
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFP+Y+FNVL G+D GKG VY YDA+GS+E Y+ G+G+ LIMP
Sbjct: 238 AQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPV 297
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + Q PL+ V++VK+ ASA ERDI+TGD+ E+V++++ GI
Sbjct: 298 LDNQISRNN-----QQGEKAPLTRERIVEIVKSAVASAGERDIFTGDQAEVVMISQSGIE 352
Query: 181 REYMELRKD 189
+ M+LR D
Sbjct: 353 KTLMDLRAD 361
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 129/189 (68%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSILSR+ K+ +L K +ASSG AD+ LQK L + +Y HQH K+MS PA+
Sbjct: 46 LSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKYLKFKIQMYLHQHGKEMSTPAV 105
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L+ TLY++RFFPYY+FN++GGLD G+GCV++YDA+G +ER+ Y+ GSG LI PF
Sbjct: 106 AQMLATTLYHRRFFPYYTFNIVGGLDQNGEGCVFSYDAIGCFERLKYTVSGSGHALIEPF 165
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN + + P + S E ++LVK F+SA ERDIYTGD ++I +++K+G
Sbjct: 166 LDNLVAYKNTDNKPTIER----SCDETLELVKDIFSSAGERDIYTGDFVDIYIIDKNGTR 221
Query: 181 REYMELRKD 189
E L+KD
Sbjct: 222 YEQFPLKKD 230
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 123/189 (65%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI SR SKI KL DK V+A+SG +AD L LL R Y HQH S A+
Sbjct: 176 LSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAI 235
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFP+Y+FNVL G+D GKG VY YDA+GS+E Y+ G+G+ LIMP
Sbjct: 236 AQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPV 295
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + Q PL+ V++VK+ ASA ERDI+TGD+ E+V++++ GI
Sbjct: 296 LDNQISRNN-----QQGEKAPLTRERIVEIVKSAVASAGERDIFTGDQAEVVMISQSGIE 350
Query: 181 REYMELRKD 189
+ M+LR D
Sbjct: 351 KTLMDLRAD 359
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 123/189 (65%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI SR SKI KL DK V+A+SG +AD L LL R Y HQH S A+
Sbjct: 176 LSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAI 235
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFP+Y+FNVL G+D GKG VY YDA+GS+E Y+ G+G+ LIMP
Sbjct: 236 AQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPV 295
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + Q PL+ V++VK+ ASA ERDI+TGD+ E+V++++ GI
Sbjct: 296 LDNQISRNN-----QQGEKAPLTRERIVEIVKSAVASAGERDIFTGDQAEVVMISQSGIE 350
Query: 181 REYMELRKD 189
+ M+LR D
Sbjct: 351 KTLMDLRAD 359
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ KL+DK V+ ++G D L +LL+AR +Y+H+HNK MS PA+
Sbjct: 48 LSTGFSIYTREQKKLFKLSDKTVLGATGCWCDTLTLTRLLSARMQMYEHEHNKSMSTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY NVL GLD +GKGCVY+YD +G ER Y + GS + P
Sbjct: 108 AQMLSTMLYYKRFFPYYVSNVLAGLDADGKGCVYSYDPIGHCERSNYRAGGSAGAQLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ L VT P+ + +A+ L+K F SA ERDIYTGD + I+++ G
Sbjct: 168 LDNQIG------LKNMQNVTEAPIPKEKALALLKDVFISAAERDIYTGDCIYILIITASG 221
Query: 179 IHREYMELRKD 189
I E ELRKD
Sbjct: 222 IQEEKFELRKD 232
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ I SRD+ K +L D V+ S GFQ DV L K++ A+ IY H + K+MSC ++
Sbjct: 39 LSEGFQIYSRDFPKTYQLGDNVVLGSCGFQGDVTTLNKVIEAQLKIYDHIYQKKMSCESL 98
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY++N+L GLD++GKGCV+++D +GSYER Y + GS S+++ P
Sbjct: 99 AQLLSTILYTRRFFPYYTYNILAGLDSKGKGCVFSFDPIGSYEREVYRAGGSASSMLQPL 158
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ LL PLS +AV LV F SA ERDIYTGD + I +++ DG+
Sbjct: 159 LDNQIG----LLNQTGVEKKPLSVEKAVQLVTDVFTSAAERDIYTGDGIRINIISADGVD 214
Query: 181 REYMELRKD 189
+ + LR+D
Sbjct: 215 IKEVPLRRD 223
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+C A+
Sbjct: 41 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTCGAI 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 101 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 160
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PL++ +AV LVK F SA ERD+YTGD L I ++NK+G
Sbjct: 161 LDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRICIINKEG 214
Query: 179 IHREYMELRKD 189
I + + LRKD
Sbjct: 215 ISEQTIPLRKD 225
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK MS A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMSSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ D V PL++ +A+ LVK F SA ERD+YTGD L I ++ K+G
Sbjct: 173 LDNQIG------FKNMDGVQQVPLTQEKAIQLVKDVFISAAERDVYTGDALHICIITKEG 226
Query: 179 IHREYMELRKD 189
I + ++LRKD
Sbjct: 227 IQEQTVQLRKD 237
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL++ +AV LVK F SA ERD+YTGD L I V+ K+GI+
Sbjct: 173 LDNQIGFKN---MEGVEHV-PLTKDKAVQLVKDVFISAAERDVYTGDALRICVITKEGIN 228
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 229 EETIPLRKD 237
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 54 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAI 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P
Sbjct: 114 AAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PLS+ +AV LVK F SA ERD+YTGD L+I ++ K+GI
Sbjct: 174 LDNQIGFKN---MENVEQV-PLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIR 229
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 230 EEIVPLRKD 238
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PLS+ +AV LVK F SA ERD+YTGD L+I ++ K+GI
Sbjct: 173 LDNQIGFKN---MENVEQV-PLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIR 228
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 229 EEIVPLRKD 237
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ L+ K ++ SG D L +LL+AR +Y+H+H K+M A+
Sbjct: 52 LSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRLLSARMQMYEHEHQKEMPTLAV 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+LGGLD +GKGCVY+YD +G E Y + GS L+ P
Sbjct: 112 AQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSYDPIGHCEVTKYRAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V PL++ +AV ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 172 LDNQIGYKN------QEGVEPVPLTQEKAVAIIKDVFISAAERDIYTGDSISIKIITKDG 225
Query: 179 IHREYMELRKD 189
I ELRKD
Sbjct: 226 IQDSTFELRKD 236
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGYSI +R+ SK+ KL+++CV+ S+G D+ + L AR +Y H+H++ MS PA+
Sbjct: 48 LSTGYSIYTREQSKLFKLSNQCVLGSTGCWCDILTFTRFLEARMKMYLHEHHRLMSTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QL+ LY KRFFPYY N+L GLD +GKGC+Y YD VG ERV Y + GS S L+ P
Sbjct: 108 AQLVVTMLYNKRFFPYYISNILAGLDEDGKGCIYCYDPVGHCERVQYRAGGSSSALLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V P E AV+++K F S+ ERDIYTGD + I +++K+GI
Sbjct: 168 LDNQIGFKN---MENVELVPPTRE-RAVNIIKDVFISSAERDIYTGDSVVINIIDKNGIK 223
Query: 181 REYMELRKD 189
E + LR+D
Sbjct: 224 EEMLALRRD 232
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ KL+++ V+ ++G D L +LL AR +Y+H+HNK M+ PA+
Sbjct: 48 LSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMTTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+L GLD +GKGC+Y+YD +G ER Y + GS + P
Sbjct: 108 AQMLSTMLYYKRFFPYYVSNILAGLDADGKGCIYSYDPIGHCERSTYRAGGSAGAQLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ L VT P+ + +A+ L+K F SA ERDIYTGD + I+++ +G
Sbjct: 168 LDNQIG------LKNMQNVTEAPVPKEKALALLKDVFISAAERDIYTGDCIYIIIITANG 221
Query: 179 IHREYMELRKD 189
I E ELRKD
Sbjct: 222 IQEEKFELRKD 232
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ L+ K ++ SG D L +LL+AR +Y+H+H K+M A+
Sbjct: 52 LSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRLLSARMQMYEHEHQKEMPTLAV 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+LGGLD +GKGCVY+YD +G E Y + GS L+ P
Sbjct: 112 AQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSYDPIGHCEVTKYRAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V PL++ +AV ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 172 LDNQIGYKN------QEGVEPIPLTQEKAVAIIKDVFISAAERDIYTGDSISIKIITKDG 225
Query: 179 IHREYMELRKD 189
I ELRKD
Sbjct: 226 IQDSTFELRKD 236
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +RD K+ KL++ V+ ++G D L +LL AR +Y+H+HNK M+ PA+
Sbjct: 48 LSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY NVL GLD++GKGCVY+YD +G R + + GS + + P
Sbjct: 108 AQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ L VT PL +A+ L+K F SA ERDIYTGD + I+++ G
Sbjct: 168 LDNQIG------LKNMQNVTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASG 221
Query: 179 IHREYMELRKD 189
I E ELRKD
Sbjct: 222 IQEEKFELRKD 232
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PLS+ +AV LVK F SA ERD+YTGD L I ++ KDG
Sbjct: 173 LDNQIG------FKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDG 226
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 227 IKEETVPLRKD 237
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY I +R+ SK+ KL+++CV+ S+G D+ + L AR +Y H+H+K MS PA+
Sbjct: 48 LSSGYHIHTREQSKLFKLSNQCVLGSTGCWCDILTFTRFLEARMKMYLHEHHKLMSTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QL+ LY KRFFPYY N+L GLD EGKGC+Y YD VG ERV Y + GS S L+ P
Sbjct: 108 AQLIVTMLYNKRFFPYYISNILAGLDEEGKGCIYCYDPVGHSERVQYRAGGSSSALLQPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + P + AV+++K F SA ERDIYTGD + I +++KDGI
Sbjct: 168 LDNQIGFKNMENVKPE----PPTRERAVNIIKDVFISAAERDIYTGDSVIIHIIDKDGIK 223
Query: 181 REYMELRKD 189
+ M LR+D
Sbjct: 224 EDKMPLRRD 232
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PLS+ +AV LVK F SA ERD+YTGD L I ++ KDG
Sbjct: 173 LDNQIG------FKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDG 226
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 227 IKEETVPLRKD 237
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +R+ K+ L+ K V+ SG D L + L+AR +Y+H+H K+M+ PA+
Sbjct: 52 LSVGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRFLSARMQMYEHEHQKEMATPAV 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYY+RFFPYY N++GGLD++G GCVY+YD +G E Y + GS L+ P
Sbjct: 112 AQMLSTMLYYRRFFPYYISNIIGGLDDKGHGCVYSYDPIGHCEAAKYRAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V PL++ +A+ ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 172 LDNQIGYKN------QEGVEPVPLTQEKAIAVIKDVFISAAERDIYTGDSISIKIITKDG 225
Query: 179 IHREYMELRKD 189
I E ELRKD
Sbjct: 226 IKDESFELRKD 236
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ KL+++ V+ ++G D L +LL AR +Y+H+HNK M+ PA+
Sbjct: 48 LSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMTTPAV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+L GLD +GKGC+Y+YD +G ER Y + GS + P
Sbjct: 108 AQMLSTMLYYKRFFPYYVSNILAGLDADGKGCIYSYDPIGHCERSTYRAGGSAGAQLQPL 167
Query: 121 LDNQLKSPSPLLLPAQD-AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ L Q+ + P+ + +A+ L+K F SA ERDIYTGD + I+++ +GI
Sbjct: 168 LDNQIG-----LKNMQNVSEAPVPKEKALALLKDVFISAAERDIYTGDCIYIIIITANGI 222
Query: 180 HREYMELRKD 189
E ELRKD
Sbjct: 223 QEEKFELRKD 232
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK MS A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMSSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + Q PLS+ +A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 173 LDNQIGFKN--MENVQQ--VPLSQEKAIQLVKDVFISAAERDVYTGDALRICIITKEGIK 228
Query: 181 REYMELRKD 189
+ + LRKD
Sbjct: 229 EQTIPLRKD 237
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PLS+ +AV LVK F SA ERD+YTGD L I ++ KDG
Sbjct: 173 LDNQIG------FKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDG 226
Query: 179 IHREYMELRKD 189
I E LRKD
Sbjct: 227 IKEETFPLRKD 237
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL+ +AV LVK F SA ERD+YTGD LEI ++ K+GI
Sbjct: 173 LDNQIGFKN---MENVEEV-PLTLEKAVQLVKDVFISAAERDVYTGDALEICIITKEGIR 228
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 229 EEIVPLRKD 237
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 121/192 (63%), Gaps = 12/192 (6%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ ++ + V+A+ G AD + L K + R YQ QH+K MS PAM
Sbjct: 48 SEGYSINTRYAPKVHEMRNGTVLATGGMFADSQTLMKRIQQRLEWYQFQHDKNMSAPAMA 107
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q+LS LYYKRFFPY+S+ +GGLD GKGCVYTYD VG+YERV + GS LI PFL
Sbjct: 108 QMLSTILYYKRFFPYFSWCSVGGLDEHGKGCVYTYDPVGNYERVSWDCGGSAGKLIQPFL 167
Query: 122 DNQLK----SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ S + LP+ + V +VK F SATERDIYTGD LEI V+ KD
Sbjct: 168 DNQIGKHHMSGASKSLPSLETVK--------RIVKDAFTSATERDIYTGDFLEIFVITKD 219
Query: 178 GIHREYMELRKD 189
GI +E + L+ D
Sbjct: 220 GITKEMLPLKLD 231
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PLS+ +A+ LVK F SA ERD+YTGD L I ++ KDG
Sbjct: 173 LDNQIG------FKNMEGVQHLPLSQEKALQLVKDVFISAAERDVYTGDALRICIVTKDG 226
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 227 IKEENVPLRKD 237
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EG+G VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL++ +AV LVK F SA ERD+YTGD L++ +++K+GI
Sbjct: 173 LDNQIGFKN---MENVEHV-PLTQEKAVQLVKDVFISAAERDVYTGDALKVCIVSKEGIK 228
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 229 EEIVPLRKD 237
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SR+ K KL DK V+ +GF AD L K++ AR +Y+H +NK M+ A+
Sbjct: 55 LSEGYSIHSRNTPKCYKLTDKTVIGCTGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAI 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 115 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPL 174
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + PL+ +A+ L+K F SA ERD+YTGD L I ++ KDG+
Sbjct: 175 LDNQIGYKNMQNVEQ----LPLTLEKALKLIKDVFISAAERDVYTGDALHISIVTKDGVR 230
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 231 EESISLRKD 239
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L +++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTEIIDARLKMYKHSNNKCMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PLS+ +AV LVK F SA ERD+YTGD L I ++ KDG
Sbjct: 173 LDNQIG------FKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDG 226
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 227 IKEETVPLRKD 237
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD +K+ +L+D V+ SG D L ++L+AR +YQ +HNK M+ PA
Sbjct: 51 LSAGFSIYTRDQNKLFRLSDTTVLGCSGCWCDTLTLTRILSARMQMYQQEHNKTMATPAC 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+L GLDNEGKGC+Y+YD +G E+ Y + GS L+ P
Sbjct: 111 AQMLSTMLYYKRFFPYYISNILVGLDNEGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPL 170
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + +D+ L A A+ +K F SA ERDI+TGD + I ++ KDGI
Sbjct: 171 LDNQIGLKN--MQNVKDSKLTLERAAAI--IKDVFISAAERDIFTGDNILINIITKDGIK 226
Query: 181 REYMELRKD 189
+ +LRKD
Sbjct: 227 EDSFQLRKD 235
>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI +R+ SKI KL ++CV+ +SG AD L K+L R Y H+H ++ + A+
Sbjct: 57 VSKGYSIATRNGSKITKLTERCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTVGAV 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSN LYYKRFFPYY+FN++ G+D GKG VY YDA+GS+E + +QGSGS+L+
Sbjct: 117 AQMLSNILYYKRFFPYYTFNMIAGIDENGKGKVYGYDAIGSFESIPCGAQGSGSSLVQSI 176
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL L + L+E + V+L K ASATERDI+TGD I ++ GI
Sbjct: 177 LDNQLTKAHQQLASHE----ALTEGQMVELCKDVIASATERDIHTGDSNTICTIDSTGIK 232
Query: 181 REYMELRKD 189
+ ELRKD
Sbjct: 233 MQTFELRKD 241
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K +L D V+ +GF DV L K+L AR + +H+H+K+M A+
Sbjct: 17 LSEGFSIHTRDSPKNYQLTDGTVLGCAGFHGDVLTLTKVLTARLKMXEHEHHKKMFTSAI 76
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LYY+RFFPYY++N+L GLD EGKGCVY++D VGSYER Y + GS S L+ P
Sbjct: 77 AAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGSYERETYRAAGSSSALLQPL 136
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + P+ +AV LVK F SA ERDIYTGD + + VL KDG
Sbjct: 137 LDNQIGGKNQEGWVKE----PIPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDGCK 192
Query: 181 REYMELRKD 189
E LR+D
Sbjct: 193 EERFPLRRD 201
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 60 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 119
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 120 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 179
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 180 LDNQVGFKN-----MQNVEHVPLSLERAMQLVKDVFISAAERDVYTGDSLKICIVTKDGI 234
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 235 KEETIPLRKD 244
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG++I +R+ K+ L+D ++ SG D L +LL+AR +Y+H+H K+MS PA
Sbjct: 53 LSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDTTTLTRLLSARMQMYKHEHQKEMSTPAT 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LY+KRFFPYY N+L GLD GKGC+Y+YD +G E+ Y + GS L+ P
Sbjct: 113 AQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ VT PL++ +A+ ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 173 LDNQIGYKN------QEGVTPAPLTQEKAIAILKDVFTSAAERDIYTGDGITIKIITKDG 226
Query: 179 IHREYMELRKD 189
I LRKD
Sbjct: 227 IEISSFALRKD 237
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 60 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 119
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 120 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 179
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 180 LDNQVGFKN-----MQNVEHIPLSLERAMQLVKDVFISAAERDVYTGDSLKICIVTKDGI 234
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 235 KEETVPLRKD 244
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R K+ L+ ++ SG D L +LL+AR +Y+H+H K+MS PA
Sbjct: 52 LSTGFSIYTRQQDKLFPLSKTTILGCSGCWCDTLTLTRLLSARMQMYKHEHQKEMSTPAT 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+L GLD GKGC+Y+YD +G E+ Y + GS L+ P
Sbjct: 112 AQMLSTMLYYKRFFPYYVSNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ +TP L++ +AV ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 172 LDNQIGYKN------QEGITPVNLTQEKAVAILKDVFTSAAERDIYTGDGITIKIITKDG 225
Query: 179 IHREYMELRKD 189
I LRKD
Sbjct: 226 IQDISFALRKD 236
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCPTLTKIIDARLKMYKHSNNKTMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD +G+G VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEQGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + Q PLS+ +AV LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 173 LDNQIGFKN--MENVQH--LPLSQEKAVQLVKDVFISAAERDVYTGDALRICIITKEGIK 228
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 229 EETVPLRKD 237
>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 178 bits (452), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI +R+ SKI KL ++CV+ +SG AD L K+L R Y H+H ++ + A+
Sbjct: 57 VSKGYSIATRNGSKITKLTERCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTVGAV 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSN LYYKRFFPYY+FN++ G+D GKG VY YDA+GS+E + +QGSGS+L+
Sbjct: 117 AQMLSNILYYKRFFPYYTFNMIAGIDENGKGKVYGYDAIGSFESIPCGAQGSGSSLVQSI 176
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL L + L+E + V+L K ASATERDI+TGD I ++ GI
Sbjct: 177 LDNQLTKAHQQLASHE----ALTEGQMVELCKDVIASATERDIHTGDSNTICTIDSTGIK 232
Query: 181 REYMELRKD 189
+ ELRKD
Sbjct: 233 IQTFELRKD 241
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL ++ V+ +GF D L K++ AR +Y+H +NK M+ A+
Sbjct: 54 LSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSYER + + GS S ++ P
Sbjct: 114 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPL 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 174 LDNQIGFKN---MQNVEHV-PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIK 229
Query: 181 REYMELRKD 189
+ ++LRKD
Sbjct: 230 EQTIQLRKD 238
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL ++ V+ +GF D L K++ AR +Y+H +NK M+ A+
Sbjct: 54 LSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSYER + + GS S ++ P
Sbjct: 114 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPL 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 174 LDNQIGFKN---MQNVEHV-PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIK 229
Query: 181 REYMELRKD 189
+ ++LRKD
Sbjct: 230 EQTIQLRKD 238
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ L+ K V+ SG D L ++L+AR +Y+H+H K+M PA+
Sbjct: 52 LSTGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRILSARMQMYEHEHQKEMPTPAV 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+LGGLD GKGCVY+YD +G E Y + GS L+ P
Sbjct: 112 AQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSYDPIGHCEITKYRAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V PL++ AV ++K F SA ERDIYTGD + I ++ DG
Sbjct: 172 LDNQIGYKN------QEGVESVPLTQERAVAIIKDVFTSAAERDIYTGDSIFIKIITSDG 225
Query: 179 IHREYMELRKD 189
I LRKD
Sbjct: 226 IQNFNFALRKD 236
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD +GKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYSRRFFPYYVYNIIGGLDEQGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL++ +AV LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 173 LDNQIGFKN---MEGVEHV-PLTKDKAVQLVKDVFVSAAERDVYTGDALRICIVTKEGIE 228
Query: 181 REYMELRKD 189
+ + LRKD
Sbjct: 229 EQNIPLRKD 237
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL ++ V+ +GF D L K++ AR +Y+H +NK M+ A+
Sbjct: 54 LSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSYER + + GS S ++ P
Sbjct: 114 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPL 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 174 LDNQIGFKN---MQNVEHV-PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIK 229
Query: 181 REYMELRKD 189
+ ++LRKD
Sbjct: 230 EQTIQLRKD 238
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/99 (84%), Positives = 89/99 (89%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS GY+IL+ DYSKI KLADKCVMASSGFQADV+ALQK LAAR LIYQHQHNKQMSCPAM
Sbjct: 35 MSIGYNILTCDYSKICKLADKCVMASSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 99
QLLSNTLYYKRFFPYYSFNVLGGLDNEGKG + +D V
Sbjct: 95 AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGWRWRFDIV 133
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SR+ K KL D V+ +GF AD L K++ AR +Y+H +NK M+ A+
Sbjct: 55 LSEGYSIHSRNTPKCYKLTDNTVIGCTGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAI 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 115 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPL 174
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + PL+ +A+ L+K F SA ERD+YTGD L I ++ KDGI
Sbjct: 175 LDNQIGYKNMQNVEQ----LPLTLEKALKLIKDVFISAAERDVYTGDALHISIVTKDGIR 230
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 231 EESVSLRKD 239
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ L+ K V+ SG D L ++L+AR +Y+H+H K+M PA+
Sbjct: 53 LSTGFSIYTREQQKLXPLSSKTVLGCSGCWCDTLTLTRILSARMQMYEHEHQKEMPTPAV 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+LGGLD GKGCVY+YD +G E Y + GS L+ P
Sbjct: 113 AQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSYDPIGHCEITKYRAGGSAGALLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V PL++ AV ++K F SA ERDIYTGD + I ++ DG
Sbjct: 173 LDNQIGYKN------QEGVEPVPLTQERAVAIIKDVFTSAAERDIYTGDSIFIKIITSDG 226
Query: 179 IHREYMELRKD 189
I LRKD
Sbjct: 227 IQNFSFALRKD 237
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL D+ V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTKDGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETIPLRKD 241
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI SRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHSRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDTLKICIVTKDGI 230
Query: 180 HREYMELRKD 189
E + LR+D
Sbjct: 231 REETVPLRRD 240
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMGLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ L++ ++ SG D L +LL+AR +Y+H+H K+M+ PA
Sbjct: 52 LSTGFSIYTREQDKLFPLSNTTILGCSGCWCDTLTLTRLLSARMQMYKHEHQKEMTTPAA 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LY+KRFFPYY N+L GLD GKGC+Y+YD +G E+ Y + GS L+ P
Sbjct: 112 AQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ VTP L++ +AV ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 172 LDNQIGYKN------QEGVTPAVLTQEKAVAILKDVFTSAAERDIYTGDGISIKIITKDG 225
Query: 179 IHREYMELRKD 189
I LRKD
Sbjct: 226 IKDSSFALRKD 236
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL + V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PL++ +AV LVK F SA ERD+YTGD L I ++ K+G
Sbjct: 173 LDNQIG------FKNMEGVQHLPLNQEKAVQLVKDVFISAAERDVYTGDALRICIVTKEG 226
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 227 IKEETVPLRKD 237
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 35 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 95 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 155 LDNQVGFKN---MQNVEHV-PLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIR 210
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 211 EETVSLRKD 219
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STG+SI +R+ K+ L++ ++ SG D L +LL+AR +Y+H+H K+MS PA
Sbjct: 53 LSTGFSIYTREQDKLFSLSNTTILGCSGCWCDTLTLTRLLSARMQMYKHEHQKEMSTPAA 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LY+KRFFPYY N+L GLD GKGC+Y+YD +G E+ Y + GS L+ P
Sbjct: 113 AQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ V TP+++ +AV ++K F SA ERDIYTGD + I ++ KDG
Sbjct: 173 LDNQIGYKN------QEGVTPTPVTQEKAVAILKDVFTSAAERDIYTGDGITIKIITKDG 226
Query: 179 IHREYMELRKD 189
I LRKD
Sbjct: 227 IKDSSFALRKD 237
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 123/189 (65%), Gaps = 5/189 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STGY+I SR K KL++ V+A +GF AD L+K+L R Y+ H+K MSC A+
Sbjct: 48 STGYNINSRFAPKAYKLSETSVIAMNGFHADGLTLKKVLDQRLKWYKFSHDKDMSCTALA 107
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q+LS TLY KRFFPYYSF VLGG+D EGKG VY YDA+GSYER + GS + LI PFL
Sbjct: 108 QMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDAIGSYEREKCRASGSAAALIQPFL 167
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IH 180
DNQ+ + + +D + EA+ +VK F SATERDIYTGD L+I ++ KD +
Sbjct: 168 DNQVSKKNMQNVSTED----IELDEAIKIVKDAFTSATERDIYTGDNLQIFIIRKDQPVE 223
Query: 181 REYMELRKD 189
+ L+KD
Sbjct: 224 IQVHPLKKD 232
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 124/190 (65%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+I SRD K +L ++ V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYAIHSRDSPKCYRLTEQTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 113 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ +A+ LVK F SA ERD+YTGD L+I V+ KDGI
Sbjct: 173 LDNQIGFKN-----MQNVEHVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGI 227
Query: 180 HREYMELRKD 189
E ++LRKD
Sbjct: 228 KEETIQLRKD 237
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 123/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+I SRD K KL + V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYAIHSRDSPKCYKLTEHTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 113 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ +A+ LVK F SA ERD+YTGD L+I V+ KDGI
Sbjct: 173 LDNQIGFKN-----MQNVEHVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGI 227
Query: 180 HREYMELRKD 189
E ++LRKD
Sbjct: 228 KEETIQLRKD 237
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 29 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 88
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 89 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 149 LDNQVGFKNMQNVEH----VPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIR 204
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 205 EETVSLRKD 213
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI +RD K +L DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGYSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L+I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYS+ +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGYSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETLPLRKD 241
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 121/189 (64%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGYSILSRD SK+ +L V+ G D+ L+ +L+ R +YQH + M+ AM
Sbjct: 64 LSTGYSILSRDESKLHELTPTTVLGCPGSHNDIIQLRGVLSIRAQMYQHDNETSMTSSAM 123
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLL NTLY +RFFPYY+F +L G+D GKG VYTYDA+GSY+RV ++QGSG L++P
Sbjct: 124 SQLLMNTLYSRRFFPYYAFCILCGIDENGKGVVYTYDAIGSYDRVTRAAQGSGGHLMIPL 183
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ + D L+ E D++K F +A ERDIYTGD +EI+ + GI
Sbjct: 184 LDNLVEHDT-----RTDPKKALTLQETKDIIKDAFITAGERDIYTGDSVEILTIKASGID 238
Query: 181 REYMELRKD 189
RE L+KD
Sbjct: 239 REMFALKKD 247
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVSLRKD 241
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVSLRKD 241
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETIPLRKD 241
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 231 REETVPLRKD 240
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVSLRKD 241
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL + V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 52 LSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAI 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 112 AATLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRGTYKAGGSASAMLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PL++ +AV LVK F SA ERD+YTGD L I ++ K+G
Sbjct: 172 LDNQIG------FKNMEGVQHLPLNQEKAVQLVKDVFISAAERDVYTGDALRICIVTKEG 225
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 226 IKEETVPLRKD 236
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
Length = 247
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 121/189 (64%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGYS+LSR+ SK+ +L V+ G D+ L+ +L+ R +YQH + MS AM
Sbjct: 64 LSTGYSVLSREESKLHQLTPTSVLGCPGSHNDIIQLRGVLSIRAQMYQHDNETAMSSSAM 123
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLL NTLY +RFFPYY+F +L G+D GKG VYTYDA+GSY+RV ++QGSG L++P
Sbjct: 124 AQLLMNTLYSRRFFPYYAFCILCGIDENGKGAVYTYDAIGSYDRVTRAAQGSGGHLMIPL 183
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ + D LS E D++K F +A ERDIYTGD +EI+ + GI
Sbjct: 184 LDNLVEHDT-----RTDPKKTLSLQETKDIIKDAFITAGERDIYTGDSVEILTIKASGIA 238
Query: 181 REYMELRKD 189
RE L+KD
Sbjct: 239 REVFALKKD 247
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 231 REETVPLRKD 240
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S YSI SR+ K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEDYSIHSRNTPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTSNAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 176 LDNQIGYKNMQNVEH----LPLTLEKALQLVKDVFISAAERDVYTGDALKISIVTKDGIK 231
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 232 EESIPLRKD 240
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ I SR+ K +L D ++ S GF DV L K + R ++Y+H+H K MSC ++
Sbjct: 42 LSEGFLIHSRNIPKTYQLTDTTILGSCGFHGDVLTLTKNIKTRLVMYEHEHFKTMSCSSI 101
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS TLYYKRFFPYY++N++ GLD++GKG +Y++D VGSYER Y + GS S ++ F
Sbjct: 102 AQMLSTTLYYKRFFPYYTYNIIAGLDSDGKGAIYSFDPVGSYERETYRAGGSCSAMLQSF 161
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + A+ + PLS V+L+K F SA ERDI TGD + I ++ K+G
Sbjct: 162 LDNQIGQKN----LAKKSDIPLSLERCVELIKDVFISAAERDIETGDGVLISIITKEGTK 217
Query: 181 REYMELRKD 189
E LR+D
Sbjct: 218 SEVFPLRRD 226
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L++ ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 123/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+I RD K KL ++ V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYAIHCRDSPKCYKLTERTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 113 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAAGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 173 LDNQIGFKN-----MQNVEHLPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGI 227
Query: 180 HREYMELRKD 189
E ++LRKD
Sbjct: 228 KEETVQLRKD 237
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L++ ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHIPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETIPLRKD 241
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAV 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L++ ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 242
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 126/189 (66%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI +R+ SKI KL ++CV+ +SG AD L K+L R Y H+H ++ + A+
Sbjct: 58 VSKGYSIATRNGSKITKLTERCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTIGAV 117
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSN LYYKRFFPYY+FN++ G+D G+G VY YDA+GS+E + +QGSGS+L+
Sbjct: 118 AQMLSNILYYKRFFPYYTFNMIAGIDENGQGKVYGYDAIGSFESIPCGAQGSGSSLVQSI 177
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL + + L + +A L+E + V+L K ASATERDI+TGD + ++ GI
Sbjct: 178 LDNQL-TKAHQQLASHEA---LTEGQMVELCKDVIASATERDIHTGDSNTVCTIDTTGIK 233
Query: 181 REYMELRKD 189
+ ELRKD
Sbjct: 234 IQTFELRKD 242
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K +L DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVSLRKD 241
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+G+
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGV 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+S+ +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L + ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRVCIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 123/189 (65%), Gaps = 5/189 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STGY+I SR K KL++ V+A +GF AD L+K+L R Y+ H+K MSC A+
Sbjct: 48 STGYNINSRFSPKAYKLSETSVIAMNGFHADGLTLKKVLDQRLKWYKFSHDKDMSCTALA 107
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q+LS TLY KRFFPYYSF VLGG+D EGKG VY YDA+GSYER + GS + LI PFL
Sbjct: 108 QMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDAIGSYEREKCRASGSAAALIQPFL 167
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IH 180
DNQ+ + + +D + EA+ +VK F SATERDIYTGD L+I ++ KD +
Sbjct: 168 DNQVSKKNMQNVSLED----IELDEAIKVVKDAFTSATERDIYTGDNLQIFIIRKDQPVD 223
Query: 181 REYMELRKD 189
+ L+KD
Sbjct: 224 VQIHPLKKD 232
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD GKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PL++ +AV LVK F SA ERD+YTGD L + ++ K+G
Sbjct: 173 LDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCIITKEG 226
Query: 179 IHREYMELRKD 189
I + + LRKD
Sbjct: 227 ISEQTVPLRKD 237
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ I +RD+ K ++L V+A SGF+ D L+K + R +Y+H H K S A+
Sbjct: 46 LSQGFMIHTRDHPKAVQLTANTVLAQSGFEGDSLTLKKHVQMRIGMYEHNHGKTPSTSAI 105
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
++S LYYKRFFPYY +N++ GLDNEGKGCVY+YD VGSYER Y + G+ + L+ P
Sbjct: 106 AAMISKMLYYKRFFPYYVYNIVAGLDNEGKGCVYSYDPVGSYEREQYRAAGAANELLQPL 165
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + +A PLS+ AV L CF SA ERDI TGD + I V++KDG+
Sbjct: 166 LDNQIGFKN-----MSEAGPPLSKERAVQLCIDCFISAAERDITTGDCVLIQVIDKDGVE 220
Query: 181 REYMELRKD 189
+ LR+D
Sbjct: 221 TKKFPLRRD 229
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD GKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PL++ +AV LVK F SA ERD+YTGD L + ++ K+G
Sbjct: 173 LDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCIITKEG 226
Query: 179 IHREYMELRKD 189
I + + LRKD
Sbjct: 227 ISEQTVPLRKD 237
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 29 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 88
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 89 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL+ A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 149 LDNQVGFKN---MQNVEHV-PLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIR 204
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 205 EETVPLRKD 213
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 231 REETVPLRKD 240
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SG D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGSHGDCLTLTKIIDARLKMYKHSNNKCMTSGAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VG Y+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGPYQRDTYKAGGSASAMLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PLS+ +AV LVK F SA ERD+YTGD L I ++ KDG
Sbjct: 173 LDNQIG------FKNMEGVQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDG 226
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 227 IKEETVPLRKD 237
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 122/189 (64%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+IL+RD +K+ +L DKCV+A++G AD AL+K L R +Y+ Q+ Q S +
Sbjct: 56 LSNGYNILTRDATKLSQLTDKCVLATAGQYADFIALRKFLQQRLQLYEFQNEVQASTQTV 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LLS LY +RFFPYY+FN+L GLD G VY YDA+GSY+++ Y QGSG L++
Sbjct: 116 AHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYDAIGSYDQMTYGVQGSGQELVVAV 175
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK + + + P ++ E +DL+ CF+ A ERDI+TGD +EI+++ G
Sbjct: 176 LDNQLKGYNKI-----NKTFPQTQQEILDLILDCFSCAAERDIHTGDNVEILIITPTGTE 230
Query: 181 REYMELRKD 189
R LRKD
Sbjct: 231 RIVKPLRKD 239
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 159 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 218
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 219 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 278
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ Q+ PLS A+ LVK F SA ERD+YTGD L+I ++ +DG
Sbjct: 279 LDNQVG-----FKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTRDGT 333
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 334 REETIPLRKD 343
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 231 REETVPLRKD 240
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 121/189 (64%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+ILSRD +K+ +L DKCV+A++G AD AL+K L R +Y+ Q+ Q S +
Sbjct: 56 LSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALRKFLQQRLQLYEFQNEVQASTETV 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LLS LY +RFFPYY+FN+L GLD G VY YDA+GSY+++ Y QGSG L++
Sbjct: 116 AHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYDAIGSYDQMTYGVQGSGQELVVAV 175
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQLK + + + P + E +D++ CF+ A ERDI+TGD +EI+++ G
Sbjct: 176 LDNQLKGYNKI-----NKTIPQTREEILDIILDCFSCAAERDIHTGDNVEILIITAAGTE 230
Query: 181 REYMELRKD 189
R LRKD
Sbjct: 231 RIVKPLRKD 239
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 41 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 101 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 160
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 161 LDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 215
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 216 REETVPLRKD 225
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L++ ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 RGETVPLRKD 241
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +R+ K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHTRNSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 231 REETIPLRKD 240
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y+I SR+ K KL D V+ SGF D L K+L AR +Y+H +NK MS A+
Sbjct: 55 LSEDYAIHSRNSPKCYKLTDTTVIGCSGFHGDCLTLTKILEARLKMYKHSNNKIMSSGAI 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 115 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 174
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ L V PLS +A+ LVK F SA ERD+YTGD L+I V+ KDG
Sbjct: 175 LDNQVG------LKNMQGVKQLPLSLEKALQLVKDVFISAAERDVYTGDALKICVITKDG 228
Query: 179 IHREYMELRKD 189
I E LR+D
Sbjct: 229 IKEESFPLRRD 239
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/93 (89%), Positives = 86/93 (92%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS GY+IL+ DYSKI KLADKCVMASSGFQADV+ALQK LAAR LIYQHQHNKQMSCPAM
Sbjct: 123 MSIGYNILTCDYSKICKLADKCVMASSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAM 182
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 93
QLLSNTLYYKRFFPYYSFNVLGGLDNEGKG V
Sbjct: 183 AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGWV 215
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL D+ V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 176
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 177 LDNQVGFKN-----MQNVEHIPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 232 REETVPLRKD 241
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GYSI +R +K+ +L+DK V+AS+G D AL L+ R +Y+ QH K MS PA+
Sbjct: 47 LSSGYSIHTRTQNKLFRLSDKTVLASTGCWCDTLALTSLVKVRMQMYKDQHQKNMSTPAV 106
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY NVL GLD +GKG VY+YD +G E Y + GS L+ P
Sbjct: 107 AQMLSILMYNRRFFPYYVSNVLAGLDQDGKGVVYSYDPIGHCEMTTYRAGGSAGPLLQPV 166
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L + P+ +A+ ++K F SATERDIYTGD + I ++ KDGI
Sbjct: 167 LDNQIGQKNMLNADPE----PVKMEKAISIIKDTFISATERDIYTGDSVIINIITKDGIK 222
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 223 EETLHLRKD 231
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+S+ +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 376 LSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 435
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 436 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 495
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ Q+ PLS A+ LV+ F SA ERD+YTGD L I ++ ++G+
Sbjct: 496 LDNQVG-----FKNMQNVEHVPLSLDRALRLVRDVFISAAERDVYTGDALRICIVTQEGV 550
Query: 180 HREYMELRKD 189
E + LR+D
Sbjct: 551 REETLPLRRD 560
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 172 bits (437), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GYSI +R +K+ +++D+ V+AS+G D AL L+ R +Y+ QH K M+ PA+
Sbjct: 47 LSSGYSIHTRTQNKLFRMSDRTVLASTGCWCDTLALTSLVKVRMQMYKDQHQKNMTTPAV 106
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY NVL GLD +GKG +Y+YD +G E+ Y + GS L+ P
Sbjct: 107 AQMLSILMYNRRFFPYYVSNVLAGLDADGKGVIYSYDPIGHCEKTTYRAGGSAGPLLQPV 166
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + A TP+ +A+ ++K F SATERDIYTGD + I ++ KDGI
Sbjct: 167 LDNQIGLKNMVNV----APTPVQLDKAISIIKDTFISATERDIYTGDSVIINIITKDGIK 222
Query: 181 REYMELRKD 189
E ++LRKD
Sbjct: 223 EEIVQLRKD 231
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 56 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 115
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++ GLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 116 AAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 175
Query: 121 LDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ + Q+ PL+ A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 176 LDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 230
Query: 180 HREYMELRKD 189
E + LRKD
Sbjct: 231 REETVPLRKD 240
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 118/189 (62%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +R K+ L++ V+ SG D+ L +++AAR +Y+H+H+K MS PA
Sbjct: 52 LSAGFSIYTRKQQKLFTLSETSVLGCSGCWCDILTLTRVMAARMQMYKHEHHKTMSTPAA 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRFFPYY N+L GLD EGKG +Y YD VG E+ Y + GS L+ P
Sbjct: 112 AQMLSTMLYYKRFFPYYINNILAGLDEEGKGVIYRYDPVGHCEKNTYVAGGSAGALLQPL 171
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ L PL++ +A+ +VK F SA ERDIYTGD + I ++ KDGI
Sbjct: 172 LDNQVG----YLNQENVEKIPLTKEKALSIVKDVFISAAERDIYTGDGINIKIITKDGIV 227
Query: 181 REYMELRKD 189
E +LR+D
Sbjct: 228 DETFDLRRD 236
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GYSI +R +K+ +L++ V+AS+G D AL L+ R +Y+ QH K M+ PA+
Sbjct: 47 LSSGYSIHTRTQNKLFRLSEGTVLASTGCWCDTLALTSLVKVRMQMYKDQHQKNMTTPAV 106
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY NVL GLD EG+G VY+YD +G E+ Y + GS L+ P
Sbjct: 107 AQMLSILMYNRRFFPYYVSNVLAGLDEEGRGVVYSYDPIGHCEKTTYRAGGSAGPLLQPV 166
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ L + P+ A+AV ++K F SATERDIYTGD + I ++ KDGI
Sbjct: 167 LDNQIG----LKNMVGASTEPVQLAKAVSIIKDTFISATERDIYTGDSVIINIITKDGIK 222
Query: 181 REYMELRKD 189
E ++LRKD
Sbjct: 223 EEVVQLRKD 231
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL ++ V+ +GF D L K++ A +Y+H + K M+ A+
Sbjct: 54 LSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTKIIEAGGEMYKHSNFKTMTTGAI 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSYER + + GS S ++ P
Sbjct: 114 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPL 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + + V PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 174 LDNQIGFKN---MQNVEHV-PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIK 229
Query: 181 REYMELRKD 189
+ ++LRKD
Sbjct: 230 EQSIQLRKD 238
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGYSI +R SKI KL+ +A +G +DV +L+ AR +Y H+HNK+MS PA+
Sbjct: 45 LSTGYSIYTRHQSKIFKLSKISALACAGCWSDVLTFTRLINARMQMYLHEHNKEMSTPAL 104
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y+KRFFPYY N+LGGL+ +G G +Y+YD +G+ ER + + GS L+ P
Sbjct: 105 AQMLSTMMYHKRFFPYYVSNILGGLEKDGSGWIYSYDPIGNMERSKFRAGGSSGALLQPL 164
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL + + ++ +S +A+ +V+ F SA ERDIYTGDK+ + V+ KD I
Sbjct: 165 LDNQLGFANMENVESR----SISLEKALAVVRDVFISAAERDIYTGDKIHVTVITKDEIK 220
Query: 181 REYMELRKD 189
+ ++L KD
Sbjct: 221 EDTLQLTKD 229
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL V+ + GF DV L K+L AR +++H+H+K+M+ +
Sbjct: 45 LSQGFSIFTRDLPKTYKLTTSTVLGACGFHGDVLTLTKVLNARLKMFEHEHHKKMTTSEI 104
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY++RFFPYY +N++ GLD EGKG VY++D VGSY GY ++GS + ++ P
Sbjct: 105 AAMLSTMLYHRRFFPYYVYNLIAGLDEEGKGVVYSFDPVGSYGSDGYRARGSAAAMLQPL 164
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ L Q V LS+ + V+LVK F SA ERDIYTGD + + V+ KDG
Sbjct: 165 LDNQIG------LKNQQNVQRVSLSKEKVVNLVKDVFISAAERDIYTGDAVVVHVITKDG 218
Query: 179 IHREYMELRKD 189
E LR+D
Sbjct: 219 TTTERFPLRRD 229
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GYSI SRD SK+ KL+ V+ S+G D +L L+ R +Y+H H K M+ A+
Sbjct: 49 LSSGYSIHSRDQSKLFKLSPHTVLGSTGCWCDTLSLTGLMKVRMQMYEHTHMKTMTTDAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L GLD +GKG VY+YD +G ER Y + G+ +L+ P
Sbjct: 109 AQMLSIVMYNRRFFPYYVSNILAGLDKDGKGVVYSYDPIGHCERATYRAGGTAGSLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L A D + PL++ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGYKNQNL--AADQLPPLTKDRAVSVASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
++ ++LRKD
Sbjct: 227 QKTLQLRKD 235
>gi|326428761|gb|EGD74331.1| proteasome subunit beta type-1 [Salpingoeca sp. ATCC 50818]
Length = 180
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 113/176 (64%), Gaps = 6/176 (3%)
Query: 20 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 79
DK V+AS+GF DV L K + R Y++QH K MS PA Q+L+ LY KRFFPYY++
Sbjct: 5 DKTVLASAGFHGDVLTLVKRIGVRMQNYEYQHRKPMSTPACAQMLATMLYGKRFFPYYTY 64
Query: 80 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS----PSPLLLPA 135
N+L GLD +GKGCV++YD VGSYER Y + G+ S L+ PFLDNQ ++ P +
Sbjct: 65 NILAGLDADGKGCVFSYDPVGSYEREHYRAAGTASALLQPFLDNQARALARIPDYIGRKN 124
Query: 136 QDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
Q V P+S+ A+ ++K F SA ERDIYTGD ++I ++ KDG+ LR D
Sbjct: 125 QQGVVFEPISKERAMTIIKDVFTSAAERDIYTGDAVDIRIVTKDGLEEHRFPLRCD 180
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y++ SRD K KL D V+ SGF D L K++ AR +Y+H +NK MS A+
Sbjct: 55 LSEDYAVHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKIMSAGAI 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 115 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTFKAGGSASAMLQPL 174
Query: 121 LDNQLKSPSPLLLPAQDA-VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ+ L Q+ L+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI
Sbjct: 175 LDNQVG-----LKNMQNVQQVSLTLEKALQLVKDVFISAAERDVYTGDALKICIITKDGI 229
Query: 180 HREYMELRKD 189
E + LR+D
Sbjct: 230 KEETVPLRRD 239
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 53 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAI 112
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY + FFPYY +N++GGLD GKG VY++D VGSY+R Y + GS S ++ P
Sbjct: 113 AAMLSTILYGRGFFPYYVYNIIGGLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAVLQPL 172
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + V PL++ +AV LVK F SA ERD+Y GD L + ++ K+G
Sbjct: 173 LDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYIGDALRVCIITKEG 226
Query: 179 IHREYMELRKD 189
I + + LRKD
Sbjct: 227 ISEQTVPLRKD 237
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GYSI SRD SK+ K++ K V+ S+G D +L L+ R +Y+H H K MS A+
Sbjct: 49 LSSGYSIHSRDQSKLFKMSPKTVLGSTGCWCDTLSLTGLVKVRMQMYEHTHMKTMSTDAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L GLD +GKG VY+YD +G ER Y + G+ L+ P
Sbjct: 109 AQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSYDPIGHCERATYRAGGTAGALLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + LPA D + PL++ AV + F SA ERDIYTGD + I ++ KDG+
Sbjct: 169 LDNQIGYKNQ-NLPA-DQLPPLTKERAVAVASDTFISAAERDIYTGDSVLINIITKDGVE 226
Query: 181 REYMELRKD 189
++LRKD
Sbjct: 227 ERKLQLRKD 235
>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
Length = 232
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ G++I +R+ + L ++ V+A++G AD L K++ AR IY+ Q +K +
Sbjct: 46 LGLGFAIPTRNVCRYSILNNRVVLATAGMFADTATLHKVIKARVKIYEEQQDKPFGLHSA 105
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLSNTLYY+RFFPYY+FNVLGGLD +G+G VY +DA+GS E+V G+G LI P
Sbjct: 106 AQLLSNTLYYRRFFPYYTFNVLGGLDEDGQGFVYGFDAIGSGEKVKVVCNGTGQALIQPI 165
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD-GI 179
LDNQ++ +T LS EAVDL+K F SA ERDIYTGD ++I ++ K+ G+
Sbjct: 166 LDNQVEKKQQY---ENKQITKLSLQEAVDLIKDVFTSAGERDIYTGDAIDICIITKEKGV 222
Query: 180 HREYMELRKD 189
E +L++D
Sbjct: 223 LVETFQLKQD 232
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 115/182 (63%), Gaps = 10/182 (5%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS Y IL+R+ SKI L KCV SG +AD+K L + A Y++++ K+MS ++
Sbjct: 48 MSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESV 107
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLY RFFPYYSF++L G++++GK Y YDAVGS+E YS GSG L P
Sbjct: 108 AQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPL 167
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ LK D PL E EA+++ + SA ERDI+TGD +EIV+LN +GI
Sbjct: 168 LDSLLK----------DRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSNGIR 217
Query: 181 RE 182
+E
Sbjct: 218 KE 219
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI SRD SK+ KL D+ V+ SSG AD +L K L R Y +HN+ MS A+
Sbjct: 49 LSLGFSIFSRDQSKLFKLTDRAVLGSSGCWADCVSLNKFLEIRLKTYGFEHNQPMSTKAI 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q S LY +RFFPY+++N+L G+D +GKG +Y+YD VG++ERV Y + G+ ++PF
Sbjct: 109 AQCCSTMLYSRRFFPYFAWNILAGIDEDGKGAIYSYDPVGNFERVPYQAAGNSGPQVLPF 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ + + + P+++ A++L+K F SA ERDI GD I+V+ KDG+
Sbjct: 169 LDSIVGKKN----QSNPDKAPITKERAINLIKDIFISAAERDITVGDGTHIIVITKDGLE 224
Query: 181 REYMELRKD 189
++LRKD
Sbjct: 225 EIRLDLRKD 233
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 115/182 (63%), Gaps = 10/182 (5%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS Y IL+R+ SKI L KCV SG +AD+K L + A Y++++ K+MS ++
Sbjct: 47 MSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESV 106
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLY RFFPYYSF++L G++++GK Y YDAVGS+E YS GSG L P
Sbjct: 107 AQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPL 166
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ LK D PL E EA+++ + SA ERDI+TGD +EIV+LN +GI
Sbjct: 167 LDSLLK----------DRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSNGIR 216
Query: 181 RE 182
+E
Sbjct: 217 KE 218
>gi|403374976|gb|EJY87456.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 255
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 121/190 (63%), Gaps = 7/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G++ILSR+YS+ +L D+CV+ S G AD++ L KLL ++ YQ Q K + ++
Sbjct: 72 ISQGFNILSREYSRTTRLTDQCVITSGGMVADIETLHKLLISKVKTYQRQFKKTPTVESL 131
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLL NTLY +RF P+Y+FN+L G+D G+G VY YDA+GSY+++ Y QGSGS L P
Sbjct: 132 AQLLGNTLYGRRFMPFYAFNLLCGIDVNGQGTVYGYDAIGSYDKLTYGVQGSGSELGAPI 191
Query: 121 LDNQLKSPSPLLLP-AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LDNQ + L+ A+D E D K S ERDIYTGD++E+V++NK G+
Sbjct: 192 LDNQFTGHNYLVKTLAKDV------QEVEDTAKDIINSIAERDIYTGDQVEVVIVNKHGV 245
Query: 180 HREYMELRKD 189
+ +R+D
Sbjct: 246 TVKREPIRRD 255
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 120/191 (62%), Gaps = 12/191 (6%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K +L + S +D +L K+L AR +Y+H+H+K+MS A+
Sbjct: 49 LSEGFSIHTRDSPKNYRLX----VISIHICSDWPSLTKVLTARLKMYEHEHHKKMSTTAI 104
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LYY+RFFPYY++N+L GLD EGKGCVY++D VGSYER Y + GS S L+ P
Sbjct: 105 AAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGSYERETYRAAGSSSALLQPL 164
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + Q+ P+ +AV LVK F SA ERDIYTGD + + VL KDG
Sbjct: 165 LDNQIGGKN------QEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDG 218
Query: 179 IHREYMELRKD 189
E LR+D
Sbjct: 219 CKEERFPLRRD 229
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 114/182 (62%), Gaps = 10/182 (5%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS Y IL+R+ SKI L KC+ SG +AD+K L + A Y++++ K+MS ++
Sbjct: 43 MSRDYMILTRNDSKIYPLTSKCIFTGSGMRADMKELTDQIKAHIKNYKYENGKEMSTESV 102
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLY RFFPYYSF++L G++++GK Y YDAVGS+E YS GSG L P
Sbjct: 103 AQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPL 162
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ LK D PL E EA+++ + SA ERDI+TGD +EIV+LN GI
Sbjct: 163 LDSLLK----------DRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSKGIR 212
Query: 181 RE 182
+E
Sbjct: 213 KE 214
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 119/189 (62%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GYSI SRD SK+ +++ K V+ S+G D +L L+ R +Y+H H K M+ A+
Sbjct: 49 LSSGYSIHSRDQSKLFEMSPKTVLGSTGCWCDTLSLTGLVKVRMQMYEHTHLKTMTTDAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L GLD +GKG VY+YD +G ER Y + GS L+ P
Sbjct: 109 AQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSYDPIGHCERATYRAGGSAGALLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L + D + PL++ AV + F SA ERDIYTGD + I ++ DGI
Sbjct: 169 LDNQIGYKNQNL--SLDQLPPLTKERAVAVASDTFISAAERDIYTGDSVLINIITADGIE 226
Query: 181 REYMELRKD 189
+ ++LRKD
Sbjct: 227 KRELQLRKD 235
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 86/96 (89%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSIL+RD+SKI LADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCPAM
Sbjct: 33 LSVGYSILTRDHSKICDLADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAM 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 96
QLLSNTLYYKRFFPYY+FNVLGGLD+EGK C +T+
Sbjct: 93 AQLLSNTLYYKRFFPYYAFNVLGGLDSEGKVCCFTF 128
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 119/189 (62%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+ YSI +R+ SK+ KL+D V+ SG D L K++ A+ +Y H +NK M PA+
Sbjct: 35 LSSNYSIFTRNQSKLFKLSDTTVLGCSGCWCDTLQLTKVVRAQMQMYFHDNNKVMVTPAV 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS LYYKRF PY +NVL GLD++GKGCVY+YD +G ER + + GS L+ P
Sbjct: 95 SQMLSTLLYYKRFMPYLVYNVLAGLDDQGKGCVYSYDPIGHCERSTFRAGGSSGALLQPL 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQL + + + L+ +A+ ++K F +A ERDIYTGD + I V+ KDGI
Sbjct: 155 LDNQLGYHNMENVKKEQ----LTLEKALSVLKDVFIAAAERDIYTGDSIAIYVIKKDGIK 210
Query: 181 REYMELRKD 189
E +LRKD
Sbjct: 211 SENFDLRKD 219
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI+SRD SK+ +L D +A+SG AD AL K L+AR +Y++ + KQ + A+
Sbjct: 63 ISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSKQLSARLHMYKYNNGKQANMRAI 122
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LLS TLYYKRFFPYY+FN+L G D++G+G V YDAVGS + Y+ GSG+ LI P
Sbjct: 123 ASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINYDAVGSGDFKKYAVLGSGAQLITPV 182
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD-GI 179
D + + + V E + + CF SATERDIYTGD+LEIV+L KD
Sbjct: 183 FDQYFEGYNKIKKEQLHTVE-----EFISFIVDCFESATERDIYTGDQLEIVILRKDKAP 237
Query: 180 HREYMELRKD 189
+ LRKD
Sbjct: 238 EYQLFPLRKD 247
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 120/189 (63%), Gaps = 6/189 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y I SR SK +L +KC++A SG AD+ AL+K L A+ +Y+ +HNK S A+
Sbjct: 64 LSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKTLLAKVKLYEFEHNKTPSINAI 123
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY KRFFPYYSF +L GLD +GKG VY YDAVGS+++ + + GSG +LI
Sbjct: 124 AQLLSCILYSKRFFPYYSFCLLSGLDEQGKGVVYGYDAVGSFDQHKFVALGSGGSLITSI 183
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + Q + + + +++VK SA+ERD++TGD E++V++ GI
Sbjct: 184 LDNQISGNN------QTSFESIDKVGIINIVKDSITSASERDVHTGDSAEVIVIDSSGIS 237
Query: 181 REYMELRKD 189
+ LR+D
Sbjct: 238 VSSLRLRED 246
>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
Length = 174
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 110/177 (62%), Gaps = 6/177 (3%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
K KL D V+ SGF D L +L AR +Y+H +NK MS A+ +LS LY +RF
Sbjct: 3 KCYKLTDTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRF 62
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ L
Sbjct: 63 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG-----LK 117
Query: 134 PAQDAVT-PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
Q A PLS +A+ LVK F SA ERD+YTGD LE ++ KDGI E LR+D
Sbjct: 118 NMQGARQLPLSLEKALQLVKDVFISAAERDVYTGDALETCIITKDGIKEESFPLRRD 174
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+STGYSILSR+ K+ +L V+AS G DV L+ +L + +Y H + +S +
Sbjct: 64 LSTGYSILSRNEKKLQQLTSTSVLASPGSHNDVIQLRGMLQLQIQMYMHDNQAIISTENL 123
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L NTLY +RFFPYY+F VL G+D +GKG VY+YDA+GSY+RV + GSG L++P
Sbjct: 124 SQVLMNTLYSRRFFPYYAFCVLAGIDKDGKGAVYSYDAIGSYDRVSRGAVGSGGHLMIPL 183
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ S D ++ E +++K F +A ERDIYTGD +EI+ + GI
Sbjct: 184 LDNLVEHYS-----RTDPKREFTQQETKEIIKDAFITAGERDIYTGDCVEIMTITASGIE 238
Query: 181 REYMELRKD 189
+E+ EL+KD
Sbjct: 239 KEHFELKKD 247
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I SRD SK+ KL+D+ V+ S+G AD +L LL R Y+H H + M+ A+
Sbjct: 49 LSSGYNIHSRDQSKLFKLSDQTVLGSTGCWADTLSLTGLLKVRMQGYEHTHLRTMATDAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS T+Y +RFFPYY N+L G+D +GKG VY+YD +G ER Y + G+ TL+ P
Sbjct: 109 AQMLSITMYNRRFFPYYVSNILAGIDKDGKGVVYSYDPIGHCERAFYRAGGTAGTLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L ++ + L+ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGHKNINLSSSE--LPKLTIERAVAIASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
+ ++LR D
Sbjct: 227 EKKLQLRLD 235
>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_d [Homo sapiens]
Length = 205
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)
Query: 20 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 79
DK V+ SGF D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +
Sbjct: 40 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99
Query: 80 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 139
N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + Q+
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 154
Query: 140 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
PLS A+ LVK F SA ERD+YTGD L I ++ K+GI E + LRKD
Sbjct: 155 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 205
>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
Length = 205
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)
Query: 20 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSF 79
DK V+ SGF D L K++ AR +Y+H +NK M+ A+ +LS LY +RFFPYY +
Sbjct: 40 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99
Query: 80 NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 139
N++GGLD EGKG VY++D VGSY+R + + GS S ++ P LDNQ+ + Q+
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 154
Query: 140 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
PLS A+ LVK F SA ERD+YTGD L I ++ K+GI E + LRKD
Sbjct: 155 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 205
>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
invadens IP1]
Length = 173
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 12/180 (6%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
IL+R+ +KI +L+ KC+ +SG +AD+ L L A+ Y++++NK+MS A+ QLLSN
Sbjct: 1 ILTRNSTKIYQLSSKCIFTASGMRADMNELTDQLKAQIKNYRYENNKEMSTEAIAQLLSN 60
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
TLY RFFPYYSF++L GL +G+ +Y YDAVGS++ V Y+ GSG L P LD LK
Sbjct: 61 TLYSHRFFPYYSFSILTGLSVKGEPLIYNYDAVGSFQEVAYTCSGSGEELAYPLLDALLK 120
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI--HREYM 184
+ +LL E E V++ + SA ERDI+TGD +E+ VLNK+GI +EYM
Sbjct: 121 QRTEVLL----------EKEGVNIARDVMTSACERDIHTGDDVELYVLNKNGITYTKEYM 170
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 121/193 (62%), Gaps = 9/193 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I +R+ +K+ +L+ V+ S+G D AL L+ AR +Y+H H+K MS A
Sbjct: 49 LSSGYTIHTRNENKLFQLSSNAVLGSTGCWCDTLALTALVKARMQMYEHTHSKTMSTDAT 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY NVL GL++EGKG VY+YD +G +E+ + GS L+ P
Sbjct: 109 AQMLSILMYNRRFFPYYVSNVLAGLNSEGKGVVYSYDPIGHFEKSNSRAGGSAGALLQPV 168
Query: 121 LDNQLKSPSPLL----LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
LDNQ+ + + PA+ L++ AV + F SATERDIYTGD ++I ++ K
Sbjct: 169 LDNQIGLKNIKMEHIGFPAE-----LTKERAVAIASDAFISATERDIYTGDSVQINIITK 223
Query: 177 DGIHREYMELRKD 189
GI + ++LRKD
Sbjct: 224 SGIEVKELQLRKD 236
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR SK+ + D V++++GF AD AL K Y N K++S A
Sbjct: 58 TTDYSINSRSESKVFDVGDGIVISANGFAADSTALVKRFRNSLKWYHFNENEKRLSLSAA 117
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 118 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 177
Query: 121 LDNQLKSPSPLL--LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LDNQ+ + + + +T LS E V LV+ F SATER I+ GD LEI+++ KDG
Sbjct: 178 LDNQVNFKNQYVPGTGEKRPITYLSVEEVVKLVRDSFTSATERHIHVGDGLEILIVTKDG 237
Query: 179 IHREYMELRKD 189
+ REY EL++D
Sbjct: 238 VRREYHELKRD 248
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S YSI +R KI KL DKC++ SSG Q+D+K L LL + ++ +H +
Sbjct: 58 LSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVI 117
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LL LY +RFFPYY+FN+L G+ NE KG +Y YDA+GSY +S GSGS LI+P
Sbjct: 118 ARLLCVILYSRRFFPYYTFNLLAGVSNENKGVLYNYDAIGSYCEATHSCVGSGSALILPI 177
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN+++ + L+ + + +D VK SATERDIYTGDK EI +++ G++
Sbjct: 178 LDNRMEQKNQLIKNLN-----FNLRDDIDFVKDAITSATERDIYTGDKTEIYIIDHMGVN 232
Query: 181 REYMELRKD 189
+EL++D
Sbjct: 233 TTTLELKQD 241
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I SR SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ A+
Sbjct: 49 LSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLTGSMKVRMQSYEHTHLRTMTTEAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P
Sbjct: 109 AQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + L D + L++ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGHKN-MNLEDADKI-KLTKDRAVSVASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
+ LRKD
Sbjct: 227 VRTLSLRKD 235
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I SR SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ A+
Sbjct: 49 LSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLTGSMKVRMQSYEHTHLRTMTTEAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P
Sbjct: 109 AQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L A L++ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGHKNMNLADADK--IKLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
+ LR+D
Sbjct: 227 VRTLTLRQD 235
>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 226
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 6/193 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
++GYSI +R K+ + + ++ ++GF AD L K+ + Y HNK MS +
Sbjct: 35 TSGYSINTRYEPKVFDVGNNLLLTANGFAADSAQLIKVFKNQLEWYHFDHNKPMSTQSAA 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY +LGGLD EGKG +Y++D VGSYER + G+ ++LIMPFL
Sbjct: 95 RFIQHLLYGKRFFPYYVHTILGGLDEEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFL 154
Query: 122 DNQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + + PA D + LS E + LV+ F+SATER I GD LEI+++ K
Sbjct: 155 DNQVNFKN-QMDPASDGKKRKPIRFLSLEEVIQLVRDAFSSATERHIQVGDGLEILIVTK 213
Query: 177 DGIHREYMELRKD 189
DG+ EY L++D
Sbjct: 214 DGVRTEYYPLKRD 226
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 118/189 (62%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I +R +K+ KL++ V+ S+G +D +L LL R +Y+H H K MS A+
Sbjct: 47 LSSGYNIHTRTQNKLFKLSENSVLGSTGCWSDTLSLTGLLKVRMQMYEHTHLKVMSTDAL 106
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS T+Y +RFFPYY N+L G+D +GKG VY+YD +G ER Y + G+ L+ P
Sbjct: 107 AQMLSITMYNRRFFPYYVSNILAGVDKDGKGVVYSYDPIGHCERATYRAGGTAGPLLQPV 166
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L +QD + LS AV + F SA ERDIYTGD + I ++ KD I
Sbjct: 167 LDNQIGYKNQNL--SQDELPKLSIDRAVAVAFDTFISAAERDIYTGDSVIINIITKDEIK 224
Query: 181 REYMELRKD 189
+ + LRKD
Sbjct: 225 SQELPLRKD 233
>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 239
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 4/188 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY ILSR+ K+ +L++K V+ S G DV +++ ++ Y + H K + PA+
Sbjct: 56 SGGYDILSRNVPKVFQLSEKSVLGSCGCWCDVLTFVRVMESKMKNYSYTHGKDLGTPALA 115
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
QL+SN+LY +RF PYY NVL GLD G+GC+YTYD VG E+V S G+ LI P L
Sbjct: 116 QLISNSLYQRRFLPYYIHNVLAGLDENGQGCIYTYDPVGCIEKVTMSCSGASMELIQPIL 175
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
DN + + +D L+ E+V+L+ CF SATER I TGD + ++ KDGI
Sbjct: 176 DNIIDKKNMTNATKKD----LTIDESVNLIHDCFVSATERQISTGDGIIFKIITKDGIET 231
Query: 182 EYMELRKD 189
+ + LR+D
Sbjct: 232 KSVGLRRD 239
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 118/189 (62%), Gaps = 8/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY I +R SK+ +L+DK V+ +G D +L ++ ++ Y + HN M ++
Sbjct: 42 LSEGYMIYTRKQSKLFQLSDKSVLGCTGCWCDTLSLTNIIQSQLKSYLYDHNTIMQPNSI 101
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY +NVL GLD G+GC+Y+YD VG E+V Y++ GS L+ PF
Sbjct: 102 AQLLSTLLYSRRFFPYYVYNVLAGLDINGEGCLYSYDPVGHCEKVNYTAGGSSGVLMQPF 161
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ L + + A P++E EA+ LVK F +A ERDIYTGD++ ++ K+GI
Sbjct: 162 LDSWLGN--------RTAENPVTEEEALSLVKDAFTAAGERDIYTGDEVVYNIIKKNGIK 213
Query: 181 REYMELRKD 189
++LRKD
Sbjct: 214 TGVVQLRKD 222
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY ILSR+ S++ L CV+ ++G D+ L + L Y++ H +++S A+
Sbjct: 23 LTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRTLEYDIKEYKYNHREEISTSAV 82
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LLSNTLY +RFFP Y+FNVL GLD G+G +Y+YDA+GS+E + Y+ QGS + I+P
Sbjct: 83 AALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAIGSFELMKYAVQGSAQSHIIPI 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ + + + L EA++L+K F + TER+ TGD+LEI+ + GI
Sbjct: 143 LDSCVAKKN-----RNEPYVDLDREEALNLMKEVFTAGTEREKDTGDQLEILTVTAHGIE 197
Query: 181 REYMELRKD 189
RE MELRKD
Sbjct: 198 REVMELRKD 206
>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 271
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 4/188 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY ILSR+ K+ +L++K V+ S G DV +++ ++ Y + H K + PA+
Sbjct: 88 SGGYDILSRNVPKVFQLSEKSVLGSCGCWCDVLTFVRVMESKMKNYSYTHGKDLGTPALA 147
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
QL+SN+LY +RF PYY NVL GLD G+GC+YTYD VG E+V S G+ LI P L
Sbjct: 148 QLISNSLYQRRFLPYYIHNVLAGLDENGQGCIYTYDPVGCIEKVTMSCSGASMELIQPIL 207
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
DN + + +D L+ E+V+L+ CF SATER I TGD + ++ KDGI
Sbjct: 208 DNIIDKKNMTNATKKD----LTIDESVNLIHDCFVSATERQISTGDGIIFKIITKDGIET 263
Query: 182 EYMELRKD 189
+ + LR+D
Sbjct: 264 KSVGLRRD 271
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY ILSR+ S++ L CV+ ++G D+ L + L Y++ H +++S A+
Sbjct: 23 LTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRTLEYDIKEYKYNHREEISTSAV 82
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LLSNTLY +RFFP Y+FNVL GLD G+G +Y+YDA+GS+E + Y+ QGS + I+P
Sbjct: 83 AALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAIGSFELMKYAVQGSAQSHIIPI 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ + + + L EA++L+K F + TER+ TGD+LEI+ + GI
Sbjct: 143 LDSCVAKKN-----RNEPYVDLDREEALNLMKEVFTAGTEREKDTGDQLEILTVTAHGIE 197
Query: 181 REYMELRKD 189
RE MELRKD
Sbjct: 198 REVMELRKD 206
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY I SR +++ ++ KCV++ SG AD+ ALQKL+ AR IY+ +H K S A+
Sbjct: 62 LSQGYRIASRSVTRVFEITAKCVLSCSGMFADITALQKLIRARVKIYEFEHKKSPSIGAV 121
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY KRFFPYY + + GLD G G Y YDAVGS++ Y + G+GS LI
Sbjct: 122 AQLLSTVLYSKRFFPYYCYCAIAGLDEYGNGVAYGYDAVGSFQSGKYFANGTGSHLISSI 181
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ S + L P ++ + +DL+K SA+ERD+YTGD ++VV++ GI
Sbjct: 182 LDNQI-SGNNQLYPK----ILTNKVDMIDLLKDAITSASERDVYTGDSAQVVVIDASGIS 236
Query: 181 REYMELRKD 189
LR+D
Sbjct: 237 ISSFPLRQD 245
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I SR SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ A+
Sbjct: 49 LSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P
Sbjct: 109 AQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + L D + L++ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGHKN-MNLEDADKI-KLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
+ LR+D
Sbjct: 227 VRTLTLRQD 235
>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
Length = 217
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 114/185 (61%), Gaps = 5/185 (2%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y I SR+ + K+ + V+A++GF DV L KLL R Y++ H K++S A LL
Sbjct: 38 YFIYSRNSPHLYKMGNGKVLATTGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALL 97
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S TLY +RFFP+Y ++LGGLD EG+G VY YD VGS+ERV ++ GS ++ PFLD++
Sbjct: 98 SVTLYTRRFFPFYVSSILGGLDEEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHR 157
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
++ + + PL +AEA+ L K F SA ERDI GD + I V+ +DGI +
Sbjct: 158 VEGKN-----LSSGLPPLEKAEAIKLAKDIFISAAERDINCGDAVLIQVITRDGIEEFHF 212
Query: 185 ELRKD 189
LR+D
Sbjct: 213 PLRRD 217
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 120/188 (63%), Gaps = 4/188 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TGYSI SR K+ + D ++ ++GF AD AL + + +Y +Q+NK + +
Sbjct: 65 TTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIENIKQHVELYHYQNNKPLKVQSCA 124
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD EGKG VY+YD VGSYER + GS ++L+MPFL
Sbjct: 125 RAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAVYSYDPVGSYEREFCRAGGSAASLVMPFL 184
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+Q+ + + + PL+ EA+ +VK F+SATER I+ GD LEI+++ K+G+ +
Sbjct: 185 DSQVNKKNQQV----ENPPPLTLEEALKVVKDAFSSATERHIHVGDGLEILIVTKEGVRK 240
Query: 182 EYMELRKD 189
E+ L++D
Sbjct: 241 EFFPLKRD 248
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I SR SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ A+
Sbjct: 49 LSSGYNIHSRTQSKLFKLSHQTVLGSTGCWADTLSLTGSMKVRMQSYEHTHLRTMTTEAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P
Sbjct: 109 AQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + L A L++ AV + F SA ERDIYTGD + I ++ DGI
Sbjct: 169 LDNQIGHKNMNLADADK--IKLTKERAVSVASDTFISAAERDIYTGDSVLINIITNDGIE 226
Query: 181 REYMELRKD 189
+ + LR+D
Sbjct: 227 VQTLPLRQD 235
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 117/189 (61%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I SR SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ A+
Sbjct: 49 LSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L G+DNEGKG VY+YD +G E+ Y + G+ TL+ P
Sbjct: 109 AQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + L D + L++ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGHKN-MNLEDADKI-KLTKEWAVSVASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
+ LR+D
Sbjct: 227 VRTLTLRQD 235
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR SK+ D VM+++GF AD +AL K Y HN K++S +
Sbjct: 49 TTDYSINSRHESKVFDCGDNIVMSANGFAADGEALVKRFKNSVKWYHFDHNDKKLSLSSA 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 109 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 168
Query: 121 LDNQLKSPSPLLLPAQDAV----TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
LDNQ+ + V T LS E + LV+ F SATER I GD LEI+++ K
Sbjct: 169 LDNQVNFKNQFEPGTNGKVRRPQTYLSIEEVIKLVRDAFTSATERHIQVGDGLEILIVTK 228
Query: 177 DGIHREYMELRKD 189
DG+ +E+ EL++D
Sbjct: 229 DGVRKEFYELKRD 241
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+I +R+ SK+IKL D C++ +SG QAD+ AL + + +Y+ H+K S A+
Sbjct: 35 LSIGYAIHTRNVSKMIKLTDTCILGTSGMQADMLALHSAMERQVELYRFTHHKTPSFGAI 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY+FN+L G+D G G V +YDA+G+Y Y++QG+ S+LI
Sbjct: 95 AQLLSTILYSRRFFPYYTFNILCGIDENGNGVVCSYDAIGNYNYEKYAAQGTSSSLITSI 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
D Q+ + L+ P ++ L V+++K ASA ERDIYTGD ++V+ DGI
Sbjct: 155 FDCQINGNNCLVKPEIKSLEDL-----VNIIKNALASAVERDIYTGDSAQVVIC--DGIV 207
Query: 181 RE--YMELRKD 189
E M+LR D
Sbjct: 208 HEPVIMDLRID 218
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 124/199 (62%), Gaps = 15/199 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAA-------RH---LIYQHQ 50
+S YSI +R+ KI K+ DKC++ SSG Q+D+K L LL +H ++ +
Sbjct: 59 LSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQVCYSKKLRKHKKIQLFYLE 118
Query: 51 HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQ 110
H+ S + +LL TLY +RFFPYY+FN+L G+D GKG +Y+YDA+GSY + ++
Sbjct: 119 HSHYPSVHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACT 178
Query: 111 GSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 170
GSGS+LI+P LDN+++ + L+ + + ++ VK SATERDIYTGD+ E
Sbjct: 179 GSGSSLILPILDNRVEQKNQLIKNMD-----FNLGDDINFVKDAMTSATERDIYTGDQAE 233
Query: 171 IVVLNKDGIHREYMELRKD 189
I +++ GI+ ++L+KD
Sbjct: 234 IYIIDNLGINTTLLDLKKD 252
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 8/188 (4%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GYSILSR+ +K+ KL+++ V+ SG DV + L AR +Y H+H K MS PA+ QL
Sbjct: 49 GYSILSREQTKLFKLSEQTVLGVSGCWCDVLTFTRTLEARMKMYLHEHLKPMSTPAVAQL 108
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+S LY+KRFFPYY N++ GLD +GKG +Y+YD VG E+ Y + G+ ++ P LDN
Sbjct: 109 VSTMLYHKRFFPYYVSNIVAGLDQDGKGTLYSYDPVGHCEKNRYRAGGAAGAMLQPLLDN 168
Query: 124 Q--LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
Q LK+ LLP +++ +A+ ++K F SA ERD TGD + I ++ K GI
Sbjct: 169 QVGLKNMKGELLPN------ITKEKALMVIKDSFISAAERDTSTGDGVIINIITKAGIEV 222
Query: 182 EYMELRKD 189
+ LRKD
Sbjct: 223 MHFPLRKD 230
>gi|311334476|emb|CBN08619.1| proteasome (prosome, macropain) subunit, beta type 1 [Microcosmus
squamiger]
Length = 181
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 4/185 (2%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+SI SR+ K ++L V+ ++GF D L+K+L R +Y H+H K+ S A+ +L
Sbjct: 1 FSIHSRNEPKTMQLTSNGVLGAAGFHGDALTLRKVLKYRIKMYVHEHGKEPSVCAIAAML 60
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S LYYKRFFPYY +N+L G+D EGKGCV++YD VG YER Y ++GS + L+ P LDNQ
Sbjct: 61 STILYYKRFFPYYVYNLLAGIDEEGKGCVFSYDPVGCYEREAYRAEGSAAELLQPLLDNQ 120
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + + ++A+T + A+ LVK F SA ERDI TGD + I V++ G+
Sbjct: 121 IGYKN-MENANREALT---KERALQLVKDVFISAAERDITTGDGVLIHVIDGRGVQTHEF 176
Query: 185 ELRKD 189
LR+D
Sbjct: 177 PLRRD 181
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 117/192 (60%), Gaps = 4/192 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TGYSI SR+ K+ D +++++GF AD AL K Y+ HNK+M+ +
Sbjct: 52 TTGYSINSREEPKVFDCGDNILISANGFAADGDALVKRFKNSMKWYRFDHNKKMTIKSAA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KR FPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFL
Sbjct: 112 RSIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFL 171
Query: 122 DNQLKSPSPLLLPA----QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + + + A+ LS E V LV+ F SATER I+ GD L+I+++ KD
Sbjct: 172 DNQVNFKNQYEPDSNGTKKRALRFLSVDEVVRLVRDAFTSATERHIHVGDGLQIMIVTKD 231
Query: 178 GIHREYMELRKD 189
G+ E+ L+KD
Sbjct: 232 GVREEFYSLKKD 243
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 117/189 (61%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S YSI +R KI KL DKC++ SSG Q+D+K L LL + ++ +H+ +
Sbjct: 57 LSLSYSIYTRFCPKISKLTDKCIIGSSGMQSDIKTLHSLLQKKIQLFVLEHSHYPDIHVI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LL LY +RFFPYY+FN+L G+D KG +Y YD+VGSY +S GSGS LI+P
Sbjct: 117 ARLLCVILYSRRFFPYYAFNILAGVDENNKGVLYNYDSVGSYCEATHSCVGSGSQLILPI 176
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN+++ + L+ T + + ++ VK SATERDIYTGDK I V++K GI+
Sbjct: 177 LDNRVEQKNQLI-----KNTNFNLGDDINFVKDAITSATERDIYTGDKTLIYVIDKMGIN 231
Query: 181 REYMELRKD 189
++L++D
Sbjct: 232 VNTLDLKQD 240
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 123/191 (64%), Gaps = 9/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y I +R +K+ KL DKC++ +SG QAD+ ALQ +L + +Y++ HN++ + A+
Sbjct: 35 LSQRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSVLERQIELYRYTHNREPTFNAI 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY+FN+L G+D +GKG V YDAVG+Y Y++QG+ S+L++
Sbjct: 95 AQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN L + + P +++ L V+LVK SA ERDI TGD E+V+ DG+
Sbjct: 155 LDNLLNGNNQKVKPEVNSLEDL-----VNLVKNAMVSAVERDICTGDSAELVIC--DGVV 207
Query: 181 RE--YMELRKD 189
E +M+LR D
Sbjct: 208 MEPVHMDLRID 218
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 6/193 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GYSI SR K+ D V++++GF AD AL Y +NK++S +
Sbjct: 51 TVGYSINSRYEPKVFDAGDNIVVSANGFSADGNALVSRFKNHLKWYHFNNNKKISLSSAA 110
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD+EGKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 111 RFIQHMLYGKRFFPYYVHTIIAGLDDEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 170
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + P D LS E + LV+ F+SATER I+ GD LEI+++ K
Sbjct: 171 DNQVNFKNQ-YEPGTDGKVKKELKYLSLEEVIQLVRDAFSSATERHIHVGDGLEILIVTK 229
Query: 177 DGIHREYMELRKD 189
DG+ EY +L++D
Sbjct: 230 DGVRTEYFDLKRD 242
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S YSI +R KI KL DKC++ SSG Q+D+K L LL + ++ +H +
Sbjct: 58 LSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVI 117
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LL LY +RFFPYY+FN+L G+ N+ KG +Y YDA+GSY +S GSGS LI+P
Sbjct: 118 ARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDAIGSYCEATHSCVGSGSALILPI 177
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN+++ + L+ + + +D VK SATERDIYTGD EI ++++ G++
Sbjct: 178 LDNRMEQKNQLIKNLN-----FNLRDDLDFVKDAITSATERDIYTGDSTEIYIIDQMGVN 232
Query: 181 REYMELRKD 189
+EL++D
Sbjct: 233 TTSLELKQD 241
>gi|159488463|ref|XP_001702229.1| hypothetical protein CHLREDRAFT_133001 [Chlamydomonas reinhardtii]
gi|158271266|gb|EDO97089.1| predicted protein [Chlamydomonas reinhardtii]
Length = 245
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 123/192 (64%), Gaps = 7/192 (3%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQA--DVKALQKLLAARHLIYQHQHNKQMSCP 58
MSTG+SIL+R+ + +++L + G + V+ L ++ R L +K+
Sbjct: 58 MSTGFSILTREATMMLQLGPQSRQVGRGREGLMHVRRLAGVVCGRRLKKGWDQDKEAELW 117
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG-STLI 117
G+LLSNTLYYKRFFP+Y+FN+ GLD +G+G VY YDA+GSYER GY QG G S
Sbjct: 118 GAGRLLSNTLYYKRFFPFYTFNLCAGLDEQGRGAVYNYDAIGSYERSGYFCQGFGRSRRF 177
Query: 118 MPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
+ + D +L++ + P+ TP S + A+DLVK F SA ERDIYTGD++EI+++ ++
Sbjct: 178 LGYCDLRLEARANTPPPSH---TPTS-STALDLVKDAFVSAGERDIYTGDQVEILIITRE 233
Query: 178 GIHREYMELRKD 189
G+ R+ ++L+ D
Sbjct: 234 GVRRDSLQLKLD 245
>gi|291230976|ref|XP_002735446.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 180
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 99/146 (67%), Gaps = 8/146 (5%)
Query: 46 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 105
+Y++ H+K+MSCPA+ ++S LYY+RFFPYY +N++ GLD EGKGCVY+YD VGSYER
Sbjct: 41 MYKNDHHKEMSCPAIAAMISTILYYRRFFPYYVYNIVAGLDTEGKGCVYSYDPVGSYERE 100
Query: 106 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDI 163
Y S GS S ++ P LDNQ+ Q+ V LS +AV+L K F SA ERDI
Sbjct: 101 SYRSAGSASAMLQPLLDNQIG------FKNQEGVEQVALSRDKAVNLAKDVFISAAERDI 154
Query: 164 YTGDKLEIVVLNKDGIHREYMELRKD 189
YTGD + I V++K+GI + LR+D
Sbjct: 155 YTGDSIIINVIDKNGITSDSFPLRRD 180
>gi|367020378|ref|XP_003659474.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
gi|347006741|gb|AEO54229.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 123/204 (60%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADK----CVMASSGFQADVKALQKLLAARHLIYQHQHN 52
+S+GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 62 LSSGYSINSRQHPKLFKIGGTTADQKDATIVLSVVGFAADGEALKERLDAICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY+ +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYTHAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + + + PL+ +E LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYVPNSGEGHALQERKRRPLTRSEVEVLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+I+ + KDGI + L+KD
Sbjct: 242 GDGLQIMTITKDGIEEITLPLKKD 265
>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
SRZ2]
Length = 291
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 110/175 (62%), Gaps = 2/175 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STGY+I +R K+ +L DK +A++GF AD +AL + R +Y+H H + M ++
Sbjct: 60 STGYNIQTRYKPKVFRLNDKATLATNGFAADAEALVSHVQQRLEMYRHAHGRSMPLHSIA 119
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
++LS LY KRFFPYY +N+LGGLD EGKG VY++D VGSYER + G+ +LI PF
Sbjct: 120 RMLSTILYGKRFFPYYVYNILGGLDEEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFF 179
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + + P + TP ++ E + +V F SATER I GD LE+ V+
Sbjct: 180 DNQIMFRNQVSTPERTVPTPGQMTLPEVLKIVVDSFTSATERHIEVGDGLEVFVV 234
>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii 17XNL]
gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
Length = 214
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 115/176 (65%), Gaps = 5/176 (2%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI K+ DKC++ SSG Q+D+K L LL + ++ +H+ S + +LL TLY +RF
Sbjct: 44 KISKITDKCIIGSSGMQSDIKTLHSLLQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRF 103
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPYY+FN+L G+D +GKG +Y+YDA+GSY ++ GSGS+LI+P LDN+++ + L+
Sbjct: 104 FPYYTFNILAGIDEDGKGVLYSYDAIGSYYMSTHACTGSGSSLILPILDNRVEQKNQLI- 162
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+ + ++ VK SATERDIYTGD+ EI +++ GI+ ++L+KD
Sbjct: 163 ----KNIDFNLRDDINFVKDAMTSATERDIYTGDQAEIYIIDNLGINTTLLDLKKD 214
>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 111/181 (61%), Gaps = 6/181 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GYSI +R K+ KL D+ V+A +GFQAD K + R Y+H H+KQM A+
Sbjct: 47 TEGYSIQTRYAPKVFKLTDRAVLAVNGFQADCSTFVKKVKQRIEWYRHAHSKQMPLKAIA 106
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY KRFFPYY++N+LGG++ +G G VY++D VGSYER + G+ S+LI PFL
Sbjct: 107 RMIQGMLYGKRFFPYYTYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAASSLIQPFL 166
Query: 122 DNQL----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ ++P+P P + P+ + +V F SATER I GD LE+ V+
Sbjct: 167 DNQIYFKNQTPAPGAAPFEPGNLPMD--TVLSIVIDSFTSATERHIEVGDGLEMFVVVAP 224
Query: 178 G 178
G
Sbjct: 225 G 225
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y I +R +K++KL DKC++ +SG QAD+ ALQ ++ + +Y+ H+K+ + A+
Sbjct: 37 LSLRYLIHTRYSTKLLKLTDKCILGTSGMQADMLALQSVIERQIEMYRFTHHKEPTFGAI 96
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY+FN+L GLD G G YDAVG+Y Y++QG+ S+L++P
Sbjct: 97 AQLLSTVLYGRRFFPYYTFNILCGLDENGNGVTCNYDAVGNYNYEKYAAQGTSSSLVVPI 156
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN L + + P +++ L V+LVK SA ERDI TGD E+VV DG+
Sbjct: 157 LDNLLNGNNQQVKPQINSLEDL-----VNLVKNAMVSAVERDICTGDSAELVVC--DGVV 209
Query: 181 RE--YMELRKD 189
E MELR D
Sbjct: 210 HEPVRMELRVD 220
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I +R+ ++ + D C + GFQ D + L + + A+ IY+HQH +Q + PA+ +LS
Sbjct: 64 IYTRELNRNSPVTDHCAIGQCGFQGDARVLLQNVKAKIRIYEHQHMEQPTAPAIAAMLST 123
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LYYKRFFPYY +N++ GLD +GKG V++YD VGSY++V GS LI PFLDNQ++
Sbjct: 124 MLYYKRFFPYYVYNIVAGLDGDGKGSVFSYDPVGSYDQVPMVCYGSAQNLIQPFLDNQIR 183
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P +DA ++ L F SA+ER+ TGD + + +++K G E + L
Sbjct: 184 RPH----IKEDAAPKMTRERVRQLAIDAFISASERETNTGDGITVTLIDKTGTTVETIPL 239
Query: 187 RKD 189
R+D
Sbjct: 240 RRD 242
>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
Length = 265
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADK----CVMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 62 LTSGYSINSRYHPKLFKIGGTTADQKDATIVLSVVGFAADGEALKERLDAICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY + +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLK-----SPSPLLLPA--QDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ P + A + PL+ +E LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYEPGSGVGHALQERERKPLTRSEGEVLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++V+ KDGI + L+KD
Sbjct: 242 GDGLQMMVITKDGIEEVLLPLKKD 265
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 4/192 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+T YSI SR K+ + D +++++GF AD +AL K + Y HNK+++ +
Sbjct: 49 TTDYSINSRYEPKVFECEDNILISANGFAADGEALVKRFKNSQMWYHFNHNKKLTIKSAA 108
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KR FPYY ++ GLD EGKG VY++D VGSYER + GS ++LIMPFL
Sbjct: 109 RNIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGSAASLIMPFL 168
Query: 122 DNQLKSPSPLLLPA----QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + + + V L E + LV+ F SATER I GD LEI+++ KD
Sbjct: 169 DNQVNLKNQYEPDSNGTKRKEVKYLGVEEVIKLVRDAFTSATERHINVGDGLEILIVTKD 228
Query: 178 GIHREYMELRKD 189
G+ +EY +L++D
Sbjct: 229 GVRKEYFDLKRD 240
>gi|350296725|gb|EGZ77702.1| proteasome component C5 [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADK----CVMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 62 LTSGYSINSRYHPKLFKIGGTTADQKDATIVLSVVGFAADGEALKERLDAICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY + +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLK-----SPSPLLLPA--QDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ P + A + PL+ +E LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYEPGSGVGHALQERERKPLTRSEGEVLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++V+ KDGI + L+KD
Sbjct: 242 GDGLQMMVITKDGIEEVSLPLKKD 265
>gi|336464627|gb|EGO52867.1| proteasome component C5 [Neurospora tetrasperma FGSC 2508]
Length = 265
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADK----CVMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 62 LTSGYSINSRYHPKLFKIGGTTADQKDATIVLSVVGFAADGEALKERLDAICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY + +LGGLD EGKG +Y+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAIYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLK-----SPSPLLLPA--QDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ P + A + PL+ +E LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYEPGSGVGHALQERERKPLTRSEGEVLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++V+ KDGI + L+KD
Sbjct: 242 GDGLQMMVITKDGIEEVLLPLKKD 265
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
Length = 150
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 92/123 (74%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGYSI++R SK+ +L V+A++G Q DV L +L R +Y+HQ K M+ ++
Sbjct: 28 MSTGYSIMTRKMSKLHQLGPNTVLAAAGCQTDVVCLVDVLKTRQKMYKHQTGKNMTTTSI 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+L NTLYYKRFFPYY+FNVL G+D EGKGCVY+YDA+GS+ERV +S+ GSG + I+P
Sbjct: 88 AQMLGNTLYYKRFFPYYAFNVLAGVDKEGKGCVYSYDAIGSFERVPFSASGSGQSYIIPL 147
Query: 121 LDN 123
LDN
Sbjct: 148 LDN 150
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 119/189 (62%), Gaps = 2/189 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+GY+I +R SK+ L+++ V+AS+G D +L L+ R Y+H H K M+ A+
Sbjct: 49 LSSGYNIHTRKQSKLFPLSNQTVLASTGCWCDTLSLTGLMKLRMQNYEHTHLKTMTTDAV 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS +Y +RFFPYY N+L G+D +GKG V++YD +G ER Y + G+ L+ P
Sbjct: 109 AQMLSIIMYNRRFFPYYVSNILAGIDKDGKGVVFSYDPIGHCERATYRAGGTAGALLQPV 168
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ + + L +DA +++ AV + F SA ERDIYTGD + I ++ KDGI
Sbjct: 169 LDNQIGYKN-MNLHGEDA-PEVTKERAVAVASDTFISAAERDIYTGDSVLINIITKDGIE 226
Query: 181 REYMELRKD 189
+ ++LR+D
Sbjct: 227 TQELQLRQD 235
>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
Length = 242
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 117/194 (60%), Gaps = 7/194 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D +M+++GF AD +AL K Y HN K++S +
Sbjct: 50 TTDYSINSRYEPKVFDCGDNIIMSANGFAADGEALVKRFKNSIKWYHFDHNDKKLSISSA 109
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD+EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 110 ARNIQHLLYGKRFFPYYVHTIIAGLDDEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 169
Query: 121 LDNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDNQ+ + +P D LS E + LV+ F SATER I+ GD LEI+++
Sbjct: 170 LDNQVNFKNQ-YVPGTDGKVKRELKYLSLEEVIKLVRDAFTSATERHIHVGDGLEILIVT 228
Query: 176 KDGIHREYMELRKD 189
K+G+ E+ EL++D
Sbjct: 229 KEGVRTEFFELKRD 242
>gi|361131660|gb|EHL03312.1| putative proteasome component C5 [Glarea lozoyensis 74030]
Length = 263
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 118/203 (58%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ V++ GF AD AL++ L A +Y++QH K
Sbjct: 61 TSGYNINTRYSPKVFKIGGTTSSQDDATLVLSVVGFAADGAALKERLDAIVKMYRYQHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS LY KRFFPYY +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 121 PMSVKACAQRLSTILYGKRFFPYYVTAILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAA 180
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + + + PL E DLVK F SA ER I G
Sbjct: 181 ASLIMPFLDNQVNYKNQYIPGSGEGHALQEREKIPLPRNEVEDLVKDAFDSAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K GI +Y+ L+KD
Sbjct: 241 DGLQMLIITKSGIEEKYLPLKKD 263
>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
Length = 264
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 61 LTSGYSINSRFHPKVFKIGGTTSDQSDATLVLSVVGFAADGEALKERLDAICKMYRYRHG 120
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY++ +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 121 KPMSVKACAQRLSTILYQKRFFPYYAYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGA 180
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + + + PL+ E LVK F A ER I
Sbjct: 181 AASLIMPFLDNQVNFKNQFIPGSGEGHALQERERRPLTRQEVETLVKDAFDGAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ K+GI + L++D
Sbjct: 241 GDGLQMMIITKEGIEEVILPLKRD 264
>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
Length = 356
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STGY+I +R K+ +L DK +A++GF AD +AL + R +Y+H H + M ++
Sbjct: 125 STGYNIQTRYKPKVFRLNDKATLATNGFAADAEALVSHVRQRLEMYRHAHGRSMPLHSIA 184
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++S LY KRFFPYY +N+LGGLD EGKG VY++D VGSYER + G+ +LI PF
Sbjct: 185 RMISTILYGKRFFPYYVYNILGGLDEEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFF 244
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + P + TP ++ E + +V F SATER I GD LE+ V+
Sbjct: 245 DNQIMFRNQTSTPERTVPTPGQMTLGEVLKIVVDSFTSATERHIEVGDGLEVFVV 299
>gi|340992803|gb|EGS23358.1| putative proteasome protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 265
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 125/204 (61%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADKC----VMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 62 LTSGYSINSRYHPKLYKIGGTTADQSDATIVLSVVGFAADGEALKERLDAICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY++ +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYAYAILGGLDEEGKGAVYSYDPVGSYEREQCRAAGA 181
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + + + PL+ +E LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYVPGSGEGHNLQERPRRPLTRSEVEVLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++V+ KDGI + L++D
Sbjct: 242 GDGLQMMVITKDGIEEILLPLKRD 265
>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 264
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 118/203 (58%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ V++ GF AD +AL++ L A +Y++QH K
Sbjct: 62 TSGYNINTRYQPKVFKIGGTTASQDDATLVLSVVGFAADGEALKERLDAIVKMYRYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q L+ LY KRFFPYY +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 PMSVKACAQRLATILYSKRFFPYYVTAILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLP-------AQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + A+ PL E DLVK F SA ER I G
Sbjct: 182 ASLIMPFLDNQVNFKNQYIPGSGVGHELAEREKIPLPRNEVEDLVKDAFDSAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI Y L++D
Sbjct: 242 DGLQMLIITKDGIEEIYKPLKRD 264
>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
Length = 214
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SR SK+ +L D+ ++ ++G AD AL K L A+ IYQ++H++ +
Sbjct: 31 LSVGYSIHSRRVSKVTRLTDRIIIGTAGMNADTIALHKQLEAQVTIYQNKHHENPDIHCI 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY KRFFPYY+FN+L G+D +G+ V+TYDA+G++E YS+ G+GS LI
Sbjct: 91 SQLLSVILYGKRFFPYYTFNLLVGIDMKGQAYVFTYDAIGNFESTAYSAHGTGSNLITSI 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+++ + + P + + V+L+K +SA ERDIYTGD EI +LN +
Sbjct: 151 LDSKIGCNN-----QKQGTPPNTLEDYVNLLKDAISSAAERDIYTGDSAEIFILNPNVSQ 205
Query: 181 REYMELRKD 189
LR D
Sbjct: 206 PILFPLRGD 214
>gi|452980444|gb|EME80205.1| hypothetical protein MYCFIDRAFT_49844 [Pseudocercospora fijiensis
CIRAD86]
Length = 263
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 121/208 (58%), Gaps = 25/208 (12%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ K V++ GF AD AL++ L +Y++QH K
Sbjct: 61 TSGYNINTRYAPKLFKIGGEGPDHVGAKIVLSVVGFAADGNALKERLDTIVKMYKYQHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+S A Q LS+ LY KRFFPYY +LGG+D EGKG +Y+YD VGSYER S G+
Sbjct: 121 DISIGACAQRLSHILYGKRFFPYYVTAILGGIDEEGKGALYSYDPVGSYEREQCRSAGAA 180
Query: 114 STLIMPFLDNQL--------KSPSPL----LLPAQDAVTPLSEAEAVDLVKTCFASATER 161
S+LI PFLDNQ+ ++P L L+P PLS A DLVK F SA ER
Sbjct: 181 SSLITPFLDNQVNLKNQHDPQAPQGLNKTALVP-----RPLSRAHVEDLVKDAFTSAVER 235
Query: 162 DIYTGDKLEIVVLNKDGIHREYMELRKD 189
I GD L+++++ +DGI Y L+KD
Sbjct: 236 HIEVGDGLQMMIITRDGIQETYSPLKKD 263
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 114/191 (59%), Gaps = 5/191 (2%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQ 62
GYSI SR KI + D VM ++GF AD KAL + Y+ HN K+ S + +
Sbjct: 52 GYSINSRYEPKIFNVGDDIVMTANGFAADGKALINSFKTQLKWYKFDHNDKRFSIQSAAR 111
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ + LY KRFFPYY ++ GLD+EGKGCVY++D VGSYER + GS S+LIMPFLD
Sbjct: 112 YIRHLLYGKRFFPYYVSTLIAGLDDEGKGCVYSFDPVGSYEREQCRAGGSASSLIMPFLD 171
Query: 123 NQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
NQ+ + + V L E ++LVK F+SATER I GD LEI ++ K+G
Sbjct: 172 NQVNFKNQYEPDSDGKVKKPLRYLELDEVLELVKDAFSSATERHIQVGDGLEIHIVTKEG 231
Query: 179 IHREYMELRKD 189
+ EY L++D
Sbjct: 232 VRVEYFPLKRD 242
>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
Length = 241
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 117/194 (60%), Gaps = 7/194 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D V++++GF AD +AL K Y HN K+++ +
Sbjct: 49 TTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKRFKNSLKWYHFDHNDKKLAMSSA 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 109 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 168
Query: 121 LDNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDNQ+ + P D L+ EA+ LV+ F SATER I+ GD LEI+++
Sbjct: 169 LDNQVNFKNQ-YEPGTDGKVKRPLKYLTIEEAIKLVRDAFTSATERHIHVGDGLEILIVT 227
Query: 176 KDGIHREYMELRKD 189
KDG+ +E+ EL++D
Sbjct: 228 KDGVRKEFFELKRD 241
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 107/184 (58%), Gaps = 20/184 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ +L DK +A++GF AD +AL + R +YQH H + M A+
Sbjct: 35 SEGYNIQTRYKPKVFRLTDKATLATNGFAADAEALVARVKTRLEMYQHTHGRSMPLHAIA 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
++LS LY KRFFPYY +N+LGG+D EG+G VY YD VGSYER+ + G+ L+ PFL
Sbjct: 95 RMLSTILYSKRFFPYYVYNILGGIDEEGRGAVYGYDPVGSYERIVCCASGAAQGLLQPFL 154
Query: 122 DNQL-----------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 170
DNQ+ K P P LP Q A+ +V F SATER I GD LE
Sbjct: 155 DNQVMFKNLNSTAETKIPEPGHLPLQ---------HALRIVMDSFTSATERHIEVGDGLE 205
Query: 171 IVVL 174
+ V+
Sbjct: 206 VFVV 209
>gi|378725413|gb|EHY51872.1| 20S proteasome subunit beta 6 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 13/201 (6%)
Query: 2 STGYSILSRDYSKIIKLAD------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
++GYSI +R K+ ++ D + V++ GF AD AL++ L A +Y++QH K M
Sbjct: 64 TSGYSINTRYAPKLFRIGDDGDSSSRIVLSVVGFAADGNALKERLDAIVKMYKYQHGKPM 123
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+ ++
Sbjct: 124 SVKACAQRLSTILYQKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREQCRAAGAAAS 183
Query: 116 LIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + + Q L + + LVK F SATER I GD
Sbjct: 184 LIMPFLDNQVNYKNQYIAGSGFGHELQQRQPESLPKDVVIGLVKDAFTSATERHIEVGDG 243
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+++++ KDGI Y L++D
Sbjct: 244 LQMLIITKDGIEETYTPLKRD 264
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
GYSI SR KI + D M ++GF AD AL + Y+ H K++S +
Sbjct: 51 VGYSINSRYEPKIFDVGDDIAMTANGFAADGAALIDRFRNQLKWYKFDHGGKKLSIKSAA 110
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD+EGKG VY+YD VGSYER + G+ ++LIMPFL
Sbjct: 111 RYIQHLLYGKRFFPYYVSTLIAGLDDEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFL 170
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + +P + LS E + LVK F+SATER IY GD LEI ++ K
Sbjct: 171 DNQVNFKNQ-FVPGTNGTEKKELRYLSLDEVLQLVKDAFSSATERHIYVGDGLEIFIITK 229
Query: 177 DGIHREYMELRKD 189
DGI +EY L++D
Sbjct: 230 DGIRKEYYPLKRD 242
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 115/189 (60%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S YSI +R KI KL DKC++ SSG Q+D+K L LL + ++ +H +
Sbjct: 58 LSLSYSIYTRYCPKISKLTDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHGHYPDIHVI 117
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LL LY +RFFPYY+FN+L G+ N+ KG +Y YDA+GSY +S GSG+ LI P
Sbjct: 118 ARLLCVILYSRRFFPYYTFNLLAGVSNDNKGVLYNYDAIGSYCEATHSCVGSGAALIFPI 177
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN+++ + L+ + + +D VK SATERDIYTGD+ EI ++++ G+
Sbjct: 178 LDNRMEQKNQLIKNLN-----FNLRDDIDFVKDAITSATERDIYTGDQTEIYIIDQMGVK 232
Query: 181 REYMELRKD 189
++L++D
Sbjct: 233 TTTLDLKQD 241
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 114/192 (59%), Gaps = 4/192 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TGYSI SR K+ + D+ ++ ++GF AD AL K + Y H K ++ +
Sbjct: 52 TTGYSINSRYEPKVFSVGDELLITANGFAADGDALVKRFRNQLKWYHFDHKKNLTIKSAA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G ++LIMPFL
Sbjct: 112 RFIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGGAASLIMPFL 171
Query: 122 DNQLKSPSPL----LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + + A+ + L E + LV+ F+SATER I GD LEI+++ KD
Sbjct: 172 DNQVNFKNQMDPDSNGTAKKELKYLKLDEVISLVRDAFSSATERHINVGDGLEILIVTKD 231
Query: 178 GIHREYMELRKD 189
G+ EY L+KD
Sbjct: 232 GVRTEYYPLKKD 243
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+++ Y ILSR+ KI +L CV+ S G DV ++ ++ Y + H K+++ PA+
Sbjct: 54 LASSYDILSRNVPKIFELGSGCVLGSCGCWCDVLTFIRVAESKLKDYHYTHGKELNTPAL 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LSNTLY +RFFPYY NVL GLD +G+G +YTYD VG E+V S G+ LI P
Sbjct: 114 AQMLSNTLYRRRFFPYYIHNVLAGLDEKGQGVIYTYDPVGHCEKVKMSCGGTSMELIQPI 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ + +D LS E V+++ CF SA ER I TGD + ++ K+GI
Sbjct: 174 LDNIVEKKNMTNGTMKD----LSIDETVNIIHDCFISAAERQIQTGDGIMFKIITKEGIE 229
Query: 181 REYMELRKD 189
+ + LR+D
Sbjct: 230 TKSVGLRRD 238
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
+GY+I SR KI + D VM ++GF AD AL + Y+ HN K+++ +
Sbjct: 50 SGYNIDSRYEPKIFDVGDNIVMTANGFAADGAALIDQFRSSFKWYKFDHNNKKLTIRSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFL
Sbjct: 110 RYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + P D L E + LVK F+SATER IY GD LEI ++ K
Sbjct: 170 DNQVNFKNQ-YEPGSDGTKKKELRYLKLDEVLQLVKDAFSSATERHIYVGDGLEIFIVTK 228
Query: 177 DGIHREYMELRKD 189
DG+ +EY L++D
Sbjct: 229 DGVRKEYYPLKRD 241
>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347826621|emb|CCD42318.1| similar to proteasome subunit beta type-1-A [Botryotinia
fuckeliana]
Length = 264
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 118/203 (58%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ V++ GF AD +AL++ L A +Y++QH K
Sbjct: 62 TSGYNINTRYQPKVFKIGGTTAAQDDATLVLSVVGFAADGEALKERLDAIVKMYRYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q L+ LY KRFFPYY +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 PMSVKACAQRLATILYSKRFFPYYVTAILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLP-------AQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + A+ PL E DLVK F SA ER I G
Sbjct: 182 ASLIMPFLDNQVNFKNQYIPGSGEGHALAEREKIPLPRKEVEDLVKDAFDSAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+GI Y L++D
Sbjct: 242 DGLQMLIITKEGIEEIYKPLKRD 264
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STGY+I +R K+ +L DK +A++GF AD +AL + R +Y+H H + M ++
Sbjct: 58 STGYNIQTRYKPKVFRLNDKATLATNGFAADAEALVSRVRQRLEMYRHAHGRSMPLHSIA 117
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++S LY KRFFPYY +N+LGGLD EGKG VY++D VGSYER + G+ +LI PF
Sbjct: 118 RMISTILYGKRFFPYYVYNILGGLDEEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFF 177
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + P P ++ E + +V F SATER I GD LE+ V+
Sbjct: 178 DNQIMFKNQTSTPEHKVPEPGQMTLPEVLKIVVDSFTSATERHIEVGDGLEVFVV 232
>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
Length = 267
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 30/214 (14%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAAR---HLIYQH-------- 49
+S YSI +R+ KI K+ DKC++ SSG Q+D+K L LL L+Y +
Sbjct: 59 LSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIF 118
Query: 50 --------------QHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 95
+H+ S + +LL TLY +RFFPYY+FN+L G+D GKG +Y+
Sbjct: 119 FSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYS 178
Query: 96 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 155
YDA+GSY + ++ GSGS+LI+P LDN+++ + L+ + + ++ VK
Sbjct: 179 YDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIKNMD-----FNLRDDINFVKDAM 233
Query: 156 ASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
SATERDIYTGDK EI +++ GI+ ++L++D
Sbjct: 234 TSATERDIYTGDKAEIYIIDNLGINTTLLDLKQD 267
>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
Length = 237
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 30/214 (14%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAAR---HLIYQH-------- 49
+S YSI +R+ KI K+ DKC++ SSG Q+D+K L LL L+Y +
Sbjct: 29 LSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIF 88
Query: 50 --------------QHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYT 95
+H+ S + +LL TLY +RFFPYY+FN+L G+D GKG +Y+
Sbjct: 89 FSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYS 148
Query: 96 YDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 155
YDA+GSY + ++ GSGS+LI+P LDN+++ + L+ + + ++ VK
Sbjct: 149 YDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIKNMD-----FNLRDDINFVKDAM 203
Query: 156 ASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
SATERDIYTGDK EI +++ GI+ ++L++D
Sbjct: 204 TSATERDIYTGDKAEIYIIDNLGINTTLLDLKQD 237
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STGY+I +R K+ +L DK +A++GF AD +AL + R +Y+H H + M ++
Sbjct: 57 STGYNIQTRYKPKVFRLNDKATLATNGFAADAEALVSRIRQRLEMYRHAHGRSMPLHSIA 116
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++S LY KRFFPYY +N+LGGLD +GKG VY++D VGSYER + G+ +LI PF
Sbjct: 117 RMISTMLYGKRFFPYYVYNILGGLDEQGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFF 176
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + P + TP ++ E + +V F SATER I GD LE+ V+
Sbjct: 177 DNQIMFRNQSDTPERKVPTPGQMTLPEVLKIVIDSFTSATERHIEVGDGLEVFVV 231
>gi|406862546|gb|EKD15596.1| proteasome component C5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 264
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 119/203 (58%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ V++ GF AD +AL++ L A +Y++QH K
Sbjct: 62 TSGYNINTRYAPKVFKIGGTTSSQDDATLVLSVVGFAADGEALKERLDAVVKMYRYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS LY KRFFPYY +LGGLD EG+G VY+YD VGSYER + G+
Sbjct: 122 PMSVKACAQRLSTILYGKRFFPYYVTAILGGLDEEGRGAVYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + + + PL +E DLVK F SA ER I G
Sbjct: 182 ASLIMPFLDNQVNFKNQYIPGSGIGHALQEREKLPLPRSEVEDLVKDAFDSAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+GI Y L+KD
Sbjct: 242 DGLQMLIVTKNGIEEIYKPLKKD 264
>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
GYSI +R ++ + D VM ++GF AD AL Y+ HN K++S +
Sbjct: 51 VGYSINTRYEPRVFDVGDNIVMTANGFDADGAALIDRFRNSLKWYKFDHNGKRLSISSAA 110
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD+EG+G VY+YD VGSYER + G+ ++LIMPFL
Sbjct: 111 RYIQHLLYGKRFFPYYVSTLIAGLDDEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFL 170
Query: 122 DNQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + +P D + LS E + LV+ F SATER IY GD LEI+++ K
Sbjct: 171 DNQVNFKNQ-YVPGSDGKKKKELRYLSLEEVIQLVRDAFTSATERHIYVGDGLEILIVTK 229
Query: 177 DGIHREYMELRKD 189
+G+ EY L++D
Sbjct: 230 EGVRTEYFPLKRD 242
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 7/194 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D V++++GF AD +AL K Y HN K++S +
Sbjct: 49 TTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKRFKNSLKWYHFDHNDKKLSMKSA 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD GKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 109 ARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 168
Query: 121 LDNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDNQ+ + P D LS E + LV+ F SATER I+ GD LEI+++
Sbjct: 169 LDNQVNFKNQ-FEPGTDGKVKKPLKYLSIDEVIKLVRDSFTSATERHIHVGDGLEILIVT 227
Query: 176 KDGIHREYMELRKD 189
KDG+ +E+ EL++D
Sbjct: 228 KDGVRKEFYELKRD 241
>gi|367043468|ref|XP_003652114.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
gi|346999376|gb|AEO65778.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 122/204 (59%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADK----CVMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L A +Y+++H
Sbjct: 62 LTSGYSINSRFHPKLFKIGGSTADQKDATLVLSVVGFAADGEALKERLDAICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYY +LGGLD +GKG VY+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYVHAILGGLDEDGKGAVYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + + + PL+ AE LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYVPNSGEGHALQERERRPLTRAEVEMLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++ + KDGI + L+KD
Sbjct: 242 GDGLQMMAITKDGIEEIVLPLKKD 265
>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
Length = 259
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 120/201 (59%), Gaps = 14/201 (6%)
Query: 3 TGYSILSRDYSKIIKL-ADKC------VMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
+GY+I +R KI K+ AD+ +++ GF AD +AL++ L A +Y++ H K+M
Sbjct: 59 SGYNINTRFAPKIFKIGADETGEGGHIILSVVGFSADGQALKERLDAIVKMYEYHHGKRM 118
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+ ++
Sbjct: 119 SVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREYCRAAGAAAS 178
Query: 116 LIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + A Q PLS A A++LV+ F SA ER I GD
Sbjct: 179 LIMPFLDNQVNLKNQYVKSAEHGGELVQRTPEPLSRATALELVRDAFTSAVERHIEVGDG 238
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+ +++ DGI L++D
Sbjct: 239 LQTMIITADGIEEVITPLKQD 259
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A++GF AD K + R Y+H HNK MS ++
Sbjct: 52 SEGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKPMSLKSIA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY KRFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +LI PFL
Sbjct: 112 RMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFL 171
Query: 122 DNQL----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + P P P PLS + LV F SATER I GD +EI V+
Sbjct: 172 DNQVYFKNQQPEPGAAPFVPGNLPLS--TVLSLVVDSFTSATERHIEVGDGMEIYVV 226
>gi|302922344|ref|XP_003053446.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734387|gb|EEU47733.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRMSPKVFKIGGTTASQDDATLVLSVVGFAADGEALRDHLDTICKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYYS +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 PMTVNACAKRLSTVLYGKRFFPYYSHAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PL+ E L+K F A ER I G
Sbjct: 182 GSLIMPFLDNQVNFKNQYIPESGEGHELKERERRPLTRTEVETLIKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L++V++ +DGI ++ L+KD
Sbjct: 242 DNLQMVIITRDGIEETFIPLKKD 264
>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
Length = 259
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 122/201 (60%), Gaps = 14/201 (6%)
Query: 3 TGYSILSRDYSKIIKL-ADKC------VMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
+GY+I +R KI K+ AD+ +++ GF AD +AL++ L A +Y++ H K+M
Sbjct: 59 SGYNINTRFAPKIFKIGADETGEGGHIILSVVGFSADGQALKERLDAIVKMYEYHHGKRM 118
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+ ++
Sbjct: 119 SVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREYCRAAGAAAS 178
Query: 116 LIMPFLDNQLKSPSPLLLPAQDA-----VT--PLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + A+ VT PLS A A++LV+ F SA ER I GD
Sbjct: 179 LIMPFLDNQVNLKNQYVKSAEHGGELVQVTPEPLSRATALELVRDAFTSAVERHIEVGDG 238
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+ +++ DGI L++D
Sbjct: 239 LQTMIITADGIEEVITPLKQD 259
>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
Length = 260
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 122/201 (60%), Gaps = 14/201 (6%)
Query: 3 TGYSILSRDYSKIIKL-ADKC------VMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
+GY+I +R KI K+ AD+ +++ GF AD +AL++ L A +Y++ H K+M
Sbjct: 60 SGYNINTRFAPKIFKIGADETGEGGHIILSVVGFSADGQALKERLDAIVKMYEYHHGKRM 119
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+ ++
Sbjct: 120 SVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREYCRAAGAAAS 179
Query: 116 LIMPFLDNQLKSPSPLLLPAQDA-----VT--PLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + A+ VT PLS A A++LV+ F SA ER I GD
Sbjct: 180 LIMPFLDNQVNLKNQYVKSAEHGGELVQVTPEPLSRATALELVRDAFTSAVERHIEVGDG 239
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+ +++ DGI L++D
Sbjct: 240 LQTMIITADGIEEVITPLKQD 260
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ Y ILSRD K+ L V+ +SG DV ++ +R Y + H K+MS A+
Sbjct: 54 LCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFVRVAESRIKNYNYTHGKEMSTSAL 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS TLY KRFFPYY NVL GLD+EG+G ++TYD VG E+V S G+ +I P
Sbjct: 114 AQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPI 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ + + A+ + LS E V++V CF SA ER I TGD + ++ KDGI
Sbjct: 174 LDNVIEKKN--MTNAE--LVDLSIDETVNIVHDCFISAAERQIQTGDGVVFKIITKDGIE 229
Query: 181 REYMELRKD 189
+ + LR+D
Sbjct: 230 TKRVGLRRD 238
>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
GYSI +R ++ + D VM ++GF AD AL Y+ HN K++S +
Sbjct: 51 VGYSINTRYEPRVFDVGDNIVMTANGFDADGAALIDRFRNSLKWYKFDHNGKRLSILSAA 110
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD+EG+G VY+YD VGSYER + G+ ++LIMPFL
Sbjct: 111 RYIQHLLYGKRFFPYYVSTLIAGLDDEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFL 170
Query: 122 DNQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + +P D + LS E + LV+ F SATER IY GD LEI+++ K
Sbjct: 171 DNQVNFKNQ-YVPGSDGKKKKELRYLSLEEVIQLVRDAFTSATERHIYVGDGLEILIVTK 229
Query: 177 DGIHREYMELRKD 189
+G+ EY L++D
Sbjct: 230 EGVRTEYFPLKRD 242
>gi|452837570|gb|EME39512.1| hypothetical protein DOTSEDRAFT_180093 [Dothistroma septosporum
NZE10]
Length = 263
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLA--------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ K V++ GF AD KAL++ L +Y++QH K
Sbjct: 61 TSGYNINTRYEPKLFKIGGDGPENVGSKIVLSVVGFAADGKALKERLDTVVKMYKYQHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+S A Q LS+ LY KRFFPYY +LGG+D EGKG +Y+YD VGSYER + G+
Sbjct: 121 DISVHACAQRLSHILYSKRFFPYYVTAILGGIDEEGKGALYSYDPVGSYEREATRAAGAA 180
Query: 114 STLIMPFLDNQLK-------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
S+LIMPFLDNQ+ + + Q PL LVK F SA ER I G
Sbjct: 181 SSLIMPFLDNQVNLKNQYDPTQAQGFGKEQLVPKPLDRTTTEALVKDAFTSAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+GI Y L++D
Sbjct: 241 DGLQMMIITKEGIEERYAPLKRD 263
>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADK----CVMASSGFQADVKALQKLLAARHLIYQHQHN 52
+++GYSI SR + K+ K+ AD+ V++ GF AD +AL++ L +Y+++H
Sbjct: 62 LTSGYSINSRHHPKLFKIGGTTADQKDATMVLSVVGFAADGEALKERLDTICKMYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A Q LS LY KRFFPYYS +LGGLD EG G VY+YD VGSYER + G+
Sbjct: 122 KPMSVKACAQRLSTILYQKRFFPYYSHAILGGLDEEGNGAVYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + + + PL+ +E LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYIPNSGEGHALQERERRPLTRSEVEVLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ DGI + L+KD
Sbjct: 242 GDGLQMMIITNDGIEEILLPLKKD 265
>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 272
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A++GF AD K + R Y+H HNK M ++
Sbjct: 52 SEGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKSMGLKSIA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY KRFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +LI PFL
Sbjct: 112 RMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFL 171
Query: 122 DNQL----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + P P P PLS + LV F SATER I GD +EI V+
Sbjct: 172 DNQVYFRNQQPEPGAAPFVPGNLPLS--TVLSLVVDSFTSATERHIEVGDGMEIYVVMAK 229
Query: 178 G 178
G
Sbjct: 230 G 230
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ Y ILSRD K+ L V+ +SG DV ++ +R Y + H K+MS A+
Sbjct: 54 LCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFIRVAESRIKNYNYTHGKEMSTSAL 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS TLY KRFFPYY NVL GLD+EG+G ++TYD VG E+V S G+ +I P
Sbjct: 114 AQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPI 173
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDN ++ + + A+ + LS E V++V CF SA ER I TGD + ++ KDGI
Sbjct: 174 LDNVIEKKN--MTNAE--LVDLSIDETVNIVHDCFISAAERQIQTGDGVVFKIITKDGIE 229
Query: 181 REYMELRKD 189
+ + LR+D
Sbjct: 230 TKRVGLRRD 238
>gi|242786404|ref|XP_002480798.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
gi|218720945|gb|EED20364.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
Length = 253
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 117/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I SR K+ K+ V++ GF AD +AL++ L + +Y++QH K
Sbjct: 51 TSGYNINSRYAPKVFKIGGDDETGEGAHIVLSVVGFAADGQALKERLDSIVKVYRYQHGK 110
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+S A Q LS LY KRFFPYY+ +LGGLD EG+G +Y+YD VGSYER + G+
Sbjct: 111 PISVKACAQRLSTILYSKRFFPYYAHAILGGLDEEGRGALYSYDPVGSYEREQCRAAGAA 170
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
S+LIMPFLDNQ+ + + + + PL LV+ F SA ER I G
Sbjct: 171 SSLIMPFLDNQVNFKNQYIPGSGEGHALERRTPAPLPRDTVEQLVRDAFTSAVERHIEVG 230
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI Y L+KD
Sbjct: 231 DGLQMMIITKDGIQESYTPLKKD 253
>gi|340517495|gb|EGR47739.1| proteosome beta subunit protease [Trichoderma reesei QM6a]
Length = 264
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRMAPKVFKIGGTTATQEDATIVLSVCGFAADGEALRDRLDTVCKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY+ +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 PMSLNACAKRLSTILYQKRFFPYYTHAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PL+ E LVK F A ER I G
Sbjct: 182 GSLIMPFLDNQVNFKNQYIPGSGEGHELKERERRPLTRPEVETLVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI ++ L+KD
Sbjct: 242 DSLQMLIITKDGIEEVFLPLKKD 264
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A++GF AD K + R Y+H HNK M ++
Sbjct: 52 SEGYSIQTRYARKVWQLTDKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY KRFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +LI PFL
Sbjct: 112 RMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFL 171
Query: 122 DNQL----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + P P P PLS + LV F SATER I GD +EI V+
Sbjct: 172 DNQVYFKNQQPEPGAAPFVPGNLPLS--TVLSLVVDSFTSATERHIEVGDGMEIYVVMAK 229
Query: 178 G 178
G
Sbjct: 230 G 230
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 116/194 (59%), Gaps = 7/194 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D V++++GF AD +AL K Y HN K++S +
Sbjct: 49 TTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKRFKNSIKWYHFDHNDKKLSIKSA 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 109 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 168
Query: 121 LDNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDNQ+ + P D L+ E + LV+ F SATER I+ GD LEI+++
Sbjct: 169 LDNQVNFKNQ-YEPGSDGKVKRPLKYLNIDEVISLVRDAFTSATERHIHVGDGLEILIVT 227
Query: 176 KDGIHREYMELRKD 189
K+G+ +EY +L++D
Sbjct: 228 KEGVRKEYYDLKRD 241
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 9/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+ILSR+ K+ + DK V A+SG ADV+ L K + Y + ++M+
Sbjct: 41 LSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLIKHMKIESTDYHLKTQREMAIEQF 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS +YY+R FP+Y+ +++ G+D+EGKG VY+YD +GS R Y S G+G+ +I P
Sbjct: 101 TRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAVYSYDVIGSTLRTRYGSAGTGNAMICPI 160
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD +LP DA ++ A +L+++ F S ERDIYTGD + + ++ DGI
Sbjct: 161 LDEA-------ILPKSDA--EITREFAFELIQSAFKSCAERDIYTGDSVVAMCISADGIQ 211
Query: 181 REYMELRKD 189
ELRKD
Sbjct: 212 ERTFELRKD 220
>gi|6319430|ref|NP_009512.1| proteasome core particle subunit beta 6 [Saccharomyces cerevisiae
S288c]
gi|130882|sp|P23724.1|PSB6_YEAST RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Multicatalytic endopeptidase complex subunit C5;
AltName: Full=Proteasome component C5; Flags: Precursor
gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361183|pdb|3MG6|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361197|pdb|3MG6|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361211|pdb|3MG7|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361225|pdb|3MG7|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361239|pdb|3MG8|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361253|pdb|3MG8|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|403071959|pdb|4B4T|6 Chain 6, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
gi|285810292|tpg|DAA07077.1| TPA: proteasome core particle subunit beta 6 [Saccharomyces
cerevisiae S288c]
gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
gi|349576338|dbj|GAA21509.1| K7_Pre7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767035|gb|EHN08523.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301173|gb|EIW12262.1| Pre7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 241
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 5/192 (2%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
T YSI SR K+ D VM+++GF AD AL K Y HN K++S +
Sbjct: 50 TDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 110 RNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + V LS E + LV+ F SATER I GD LEI+++ KD
Sbjct: 170 DNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKD 229
Query: 178 GIHREYMELRKD 189
G+ +E+ EL++D
Sbjct: 230 GVRKEFYELKRD 241
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 7/194 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+TGYSI SR+ K+ D +++++GF AD AL K Y HN K+M+ +
Sbjct: 50 TTGYSINSRNEPKVFDCGDNILISANGFAADGDALVKKFKNNLKWYHFDHNNKKMTLKSA 109
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KR FPYY ++ GLD +GKG VY++D VGSYER + G+ +++IMPF
Sbjct: 110 ARNIQHLLYGKRMFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASIIMPF 169
Query: 121 LDNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDNQ+ + P P LS E ++LV+ F SATER I+ GD L+I+++
Sbjct: 170 LDNQVNFKNQ-YEPDSKGTKPKSIRFLSLDEVIELVRDAFTSATERHIHVGDSLQIMIIT 228
Query: 176 KDGIHREYMELRKD 189
K+G+ EY L+KD
Sbjct: 229 KEGVKEEYHSLKKD 242
>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361155|pdb|3MG0|L Chain L, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361169|pdb|3MG0|Z Chain Z, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892352|pdb|3OKJ|L Chain L, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892366|pdb|3OKJ|Z Chain Z, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780430|pdb|3OEU|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780444|pdb|3OEU|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780458|pdb|3OEV|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780472|pdb|3OEV|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610683|pdb|3TDD|L Chain L, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610697|pdb|3TDD|Z Chain Z, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545857|pdb|3SHJ|L Chain L, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545871|pdb|3SHJ|Z Chain Z, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792252|pdb|3UN4|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792266|pdb|3UN4|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792286|pdb|3UN8|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792300|pdb|3UN8|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980827|pdb|3SDI|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980841|pdb|3SDI|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980855|pdb|3SDK|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980869|pdb|3SDK|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550743|pdb|4GK7|L Chain L, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550757|pdb|4GK7|Z Chain Z, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072203|pdb|4G4S|M Chain M, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973871|pdb|4FZC|L Chain L, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973885|pdb|4FZC|Z Chain Z, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973899|pdb|4FZG|L Chain L, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973913|pdb|4FZG|Z Chain Z, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302350|pdb|4INR|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302364|pdb|4INR|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302378|pdb|4INT|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302392|pdb|4INT|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302406|pdb|4INU|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302420|pdb|4INU|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 222
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 5/192 (2%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
T YSI SR K+ D VM+++GF AD AL K Y HN K++S +
Sbjct: 31 TDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 91 RNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 150
Query: 122 DNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + V LS E + LV+ F SATER I GD LEI+++ KD
Sbjct: 151 DNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKD 210
Query: 178 GIHREYMELRKD 189
G+ +E+ EL++D
Sbjct: 211 GVRKEFYELKRD 222
>gi|401838704|gb|EJT42186.1| PRE7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 241
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
T YSI SR K+ D VM+++GF AD AL K Y HN K++S +
Sbjct: 50 TDYSINSRYEPKVFDCGDNLVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD GKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 110 RNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + P D LS E + LV+ F SATER I GD LEI+++ K
Sbjct: 170 DNQVNFKNQ-YEPGTDGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTK 228
Query: 177 DGIHREYMELRKD 189
DG+ +E+ EL++D
Sbjct: 229 DGVKKEFYELKRD 241
>gi|219114683|ref|XP_002176500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402501|gb|EEC42514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 130
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 95/135 (70%), Gaps = 5/135 (3%)
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS P++ Q+LSNTLYYKRFFPYY+FNV+GG+D +GKG VY+YDA+GS+ER YS+ GSG
Sbjct: 1 MSTPSIAQMLSNTLYYKRFFPYYAFNVMGGVDAQGKGAVYSYDAIGSFERSTYSANGSGQ 60
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
I+P LDN + + + L P L+ E V+++K F SA ERDIYTGD++EI V+
Sbjct: 61 AYIIPLLDNVIGNRNRLDEPPN-----LTAEEVVEILKDAFLSAGERDIYTGDQVEICVV 115
Query: 175 NKDGIHREYMELRKD 189
D + ++ L+ D
Sbjct: 116 RADSVTTQHFALKAD 130
>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
Length = 158
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/78 (87%), Positives = 73/78 (93%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MSTGY+IL+RDYSKI LA+KCVMA SGFQADVKALQK+L+ARHL YQHQHNKQMSCPAM
Sbjct: 35 MSTGYNILTRDYSKISHLAEKCVMAPSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAM 94
Query: 61 GQLLSNTLYYKRFFPYYS 78
QLLSNTLYYKRFFPYYS
Sbjct: 95 AQLLSNTLYYKRFFPYYS 112
>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
Length = 242
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 7/194 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D V++++GF AD +AL K Y +N K +S +
Sbjct: 50 TTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKRFKNSIKWYHFDNNDKTLSLSSA 109
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 110 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 169
Query: 121 LDNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDNQ+ + P D LS E + LV+ F SATER I+ GD LEI+++
Sbjct: 170 LDNQVNFKNQ-YEPDSDGTVKRPLKFLSIDEVIRLVRDAFTSATERHIHVGDGLEILIVT 228
Query: 176 KDGIHREYMELRKD 189
KDG+ +E+ EL++D
Sbjct: 229 KDGVRKEFYELKRD 242
>gi|212543349|ref|XP_002151829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
gi|210066736|gb|EEA20829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
Length = 252
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ V++ GF AD AL++ L + +Y++QH K
Sbjct: 50 TSGYNINTRYAPKLFKIGGDDETGEGAHIVLSVVGFAADGHALKERLDSIVKVYRYQHGK 109
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
++ A Q LS LY KRFFPYY++ +LGGLD EG+G +Y+YD VGSYER + G+
Sbjct: 110 PITVNACAQRLSTILYSKRFFPYYAYAILGGLDEEGRGALYSYDPVGSYEREQCRAAGAA 169
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
S+LIMPFLDNQ+ + + + + PL + LV+ F SA ER I G
Sbjct: 170 SSLIMPFLDNQVNFKNQYIPESGEGHALERRTPAPLPQDTVEQLVRDAFTSAVERHIEVG 229
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI Y L+KD
Sbjct: 230 DGLQMMIITKDGIQETYTPLKKD 252
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 115/192 (59%), Gaps = 5/192 (2%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
T YSI SR K+ D V++++GF AD +AL + Y HN K+++ +
Sbjct: 50 TDYSINSRFEPKVFDCGDNIVISANGFAADGEALVQRFKNSIKWYHFDHNDKKLTMKSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 110 RNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + + + V L+ E + LV+ F SATER I GD LEI+++ KD
Sbjct: 170 DNQVNFKNQYVPESNGKVKRPLKYLTIDECIKLVRDAFTSATERHIQVGDGLEILIVTKD 229
Query: 178 GIHREYMELRKD 189
G+ +EY +L++D
Sbjct: 230 GVRKEYFDLKRD 241
>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D +++++GF AD AL K Y HN K++S +
Sbjct: 50 TTDYSINSRYEPKVFDCGDNILISANGFAADGNALVKRFQNSLKWYHFDHNDKKLSMRSA 109
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 110 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 169
Query: 121 LDNQLKSPSPLLLPAQDA----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
LDNQ+ + + V L+ E V LV+ F+SATER I+ GD +EI+++ K
Sbjct: 170 LDNQVNFKNQYEPDSHGTKRKHVKFLTVEEVVQLVRDAFSSATERHIHVGDGVEILIVTK 229
Query: 177 DGIHREYMELRKD 189
+G+ +E+ EL++D
Sbjct: 230 EGVRKEFFELKRD 242
>gi|255938694|ref|XP_002560117.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584738|emb|CAP74264.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 259
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 19/205 (9%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I SR K+ K+ +++ GF AD AL++ L +Y++QH K
Sbjct: 57 TSGYNINSRMVPKVFKIGGDDETGEGANIILSVVGFAADGNALKEKLDTMVRMYKYQHGK 116
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS LY KRFFPYY +L GLD EG G +Y+YD VGSYER + G+
Sbjct: 117 SMSVGACAQRLSTILYEKRFFPYYVHAILAGLDEEGVGALYSYDPVGSYEREQCRAAGAA 176
Query: 114 STLIMPFLDNQLKSPSP---------LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 164
S+LIMPFLDNQ+ S + L+P + PL + A LVK F SA ER I
Sbjct: 177 SSLIMPFLDNQVNSKNQYIPGSGEGHALVPKK--AEPLDKETATKLVKDAFTSAVERHIE 234
Query: 165 TGDKLEIVVLNKDGIHREYMELRKD 189
GD L++V++ ++GI + L++D
Sbjct: 235 VGDGLQLVIVTREGIEEVFHALKQD 259
>gi|169601780|ref|XP_001794312.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
gi|111067849|gb|EAT88969.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
Length = 264
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 118/204 (57%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGPENKGARIVLSVVGFAADGDALKERLDTIVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS+ LY KRFFPYY +LGGLD G G +Y+YD VGSYER + G+
Sbjct: 122 PMSVAACAQRLSHILYNKRFFPYYVHAILGGLDENGTGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPA--------QDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + P Q + PLS+ DLV+ F SA ER I
Sbjct: 182 ASLIMPFLDNQVNFKN-MYEPGSGTGHDLKQKKIEPLSQDHVEDLVRDAFTSAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ K+GI + L+KD
Sbjct: 241 GDGLQMMIITKEGIAETFTPLKKD 264
>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
Length = 244
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR SK+ D V+ ++G+ AD +AL K Y HN K++S +
Sbjct: 52 TTDYSINSRYESKVFDCGDNIVITANGYAADGEALVKRFKNSVKWYHFDHNDKKLSLNSA 111
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 112 ARNIQHLLYGKRFFPYYVQTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPF 171
Query: 121 LDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
LDNQ+ + + + V LS E + LV+ F SATER I GD LEI+++ K
Sbjct: 172 LDNQVNFHNQYVPESNGRVKRPLKFLSVDEVIRLVRDAFTSATERHIQVGDGLEILIVTK 231
Query: 177 DGIHREYMELRKD 189
DG+ +++ EL++D
Sbjct: 232 DGVTKQFYELKRD 244
>gi|189193569|ref|XP_001933123.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978687|gb|EDU45313.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 264
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 119/204 (58%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGPENKGARIVLSVVGFAADGDALKERLDTIVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS+ LY KRFFPYY +LGGLD EGKG +Y+YD VGSYER + G+
Sbjct: 122 PMSVSACAQRLSHILYNKRFFPYYVHAILGGLDEEGKGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLK--------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ S + L ++ A PL DLV+ F SA ER I
Sbjct: 182 ASLIMPFLDNQVNFKNMYEPGSGTGHELKSKQA-QPLPRDHVEDLVRDAFTSAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ KDGI + L++D
Sbjct: 241 GDGLQMMIITKDGIAETFTPLKRD 264
>gi|401626713|gb|EJS44638.1| pre7p [Saccharomyces arboricola H-6]
Length = 241
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
T YSI SR K+ D VM+++GF AD AL K Y HN K++S +
Sbjct: 50 TDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD GKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 110 RNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + P D LS E + LV+ F SATER I GD LEI+++ K
Sbjct: 170 DNQVNFKNQ-YEPGTDGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTK 228
Query: 177 DGIHREYMELRKD 189
+G+ +E+ EL++D
Sbjct: 229 EGVRKEFYELKRD 241
>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
Length = 243
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 114/192 (59%), Gaps = 4/192 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GYSI SR K+ + D +++++GF AD L K+ + Y +NK MS +
Sbjct: 52 TVGYSIDSRYEPKVHNVGDNLLLSANGFSADGVQLVKVFQNQLKWYHFDNNKDMSVDSAA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ + LY KR FPYY +L GLD EGKG +Y++D VGSYER + G+ ++LIMPFL
Sbjct: 112 RLIQHLLYGKRMFPYYVSTILAGLDKEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFL 171
Query: 122 DNQLKSPSPLLLPA----QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + + + Q + L E + LV+ F SATER I GD L+I+V+ KD
Sbjct: 172 DNQVNFKNQMDPESNGTKQRPIKYLKLDEVIQLVRDAFTSATERHIEVGDGLQILVVTKD 231
Query: 178 GIHREYMELRKD 189
G+ EY L++D
Sbjct: 232 GVXTEYYPLKRD 243
>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 264
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 118/205 (57%), Gaps = 17/205 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHN 52
M++GYSI +R Y K+ ++ V++ GF AD +AL++ L A +Y+++H
Sbjct: 61 MASGYSINTRFYPKVFRIGGTTSDQKDATLVLSVVGFAADGEALKERLDAICKMYRYRHG 120
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K MS A + LS LY KRFFPYY+ +L GLD EGKG VY+YD VGSYER + G+
Sbjct: 121 KPMSAKACAKRLSTILYQKRFFPYYTHAILAGLDEEGKGAVYSYDPVGSYEREQCRAGGA 180
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD--------LVKTCFASATERDIY 164
++LIMPFLDNQ+ + +P L E E V LVK F A ER I
Sbjct: 181 AASLIMPFLDNQVNFKN-QYIPGSGEGHDLQERERVPLPRDQVEILVKDAFDGAVERHIE 239
Query: 165 TGDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ KDGI + L++D
Sbjct: 240 VGDGLQMMIITKDGIEEVILPLKQD 264
>gi|451998685|gb|EMD91149.1| hypothetical protein COCHEDRAFT_90180 [Cochliobolus heterostrophus
C5]
Length = 264
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGSDNKGARIVLSVVGFAADAHALKERLDTIVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A Q LS+ LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+
Sbjct: 122 PMTVSACAQRLSHILYNKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA--------VTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + P PL DLV+ F SA ER I
Sbjct: 182 ASLIMPFLDNQVNFKN-MYEPGSGVGHELKSKQAEPLPRDHVEDLVRDAFTSAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ KDGI Y L++D
Sbjct: 241 GDGLQMMIITKDGIAETYTPLKRD 264
>gi|398395515|ref|XP_003851216.1| proteasome core particle subunit beta 6 [Zymoseptoria tritici
IPO323]
gi|339471095|gb|EGP86192.1| hypothetical protein MYCGRDRAFT_105119 [Zymoseptoria tritici
IPO323]
Length = 264
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 21/206 (10%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGPDQTGARIVLSVVGFAADGHALKERLDTVVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M A Q LS+ LY KRFFP+Y +LGG+D+EGKG +Y+YD VGSYER + G+
Sbjct: 122 DMPVHACAQRLSHILYGKRFFPFYVTAILGGIDDEGKGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQ--LKSPSPLLLPAQD--------AVTPLSEAEAVDLVKTCFASATERDI 163
++LIMPFLDNQ LK+ + PAQ PLS +LV+ F SA ER I
Sbjct: 182 ASLIMPFLDNQVNLKNQTD---PAQPQGLEKVGLVPKPLSREHVEELVRDAFTSAVERHI 238
Query: 164 YTGDKLEIVVLNKDGIHREYMELRKD 189
GD L+++V+ K+G+ Y EL+KD
Sbjct: 239 EVGDGLQLMVITKEGVVETYSELKKD 264
>gi|389626457|ref|XP_003710882.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|351650411|gb|EHA58270.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|440470291|gb|ELQ39366.1| proteasome component C5 [Magnaporthe oryzae Y34]
gi|440486750|gb|ELQ66588.1| proteasome component C5 [Magnaporthe oryzae P131]
Length = 265
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 118/204 (57%), Gaps = 15/204 (7%)
Query: 1 MSTGYSILSRDYSKIIKL----ADKC----VMASSGFQADVKALQKLLAARHLIYQHQHN 52
M++GYSI +R Y K+ K+ AD V++ GF AD +AL++ L A IY+++H
Sbjct: 62 MASGYSINTRFYPKVFKIGGTTADNSDATLVLSVVGFAADGEALKERLDAICKIYRYRHG 121
Query: 53 KQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
K M+ A + LS LY KRFFPYY+ +L G+D EG G VY+YD VGSYER + G+
Sbjct: 122 KPMTVKACAKRLSTILYQKRFFPYYTHAILAGIDEEGHGAVYSYDPVGSYEREQCRAGGA 181
Query: 113 GSTLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + + + PL LVK F A ER I
Sbjct: 182 AASLIMPFLDNQVNFKNQYVPGSGTGHDLQERERKPLPRETVETLVKDAFDGAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ KDGI M L+KD
Sbjct: 242 GDGLQMMIITKDGIEEVIMPLKKD 265
>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
T YSI SR K+ D V++++GF AD AL K Y HN K++S +
Sbjct: 50 TDYSINSRYEPKVFDCGDNLVVSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFPYY ++ GLD GKG VY++D VGSYER + G+ ++LIMPFL
Sbjct: 110 RNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + P D LS E + LV+ F SATER I GD LEI+++ K
Sbjct: 170 DNQVNFKNQ-YEPGTDGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTK 228
Query: 177 DGIHREYMELRKD 189
DG+ +E+ EL++D
Sbjct: 229 DGVKKEFYELKRD 241
>gi|453081972|gb|EMF10020.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 255
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 116/209 (55%), Gaps = 27/209 (12%)
Query: 2 STGYSILSRDYSKIIKLA--------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ K V++ GF AD AL++ L +Y++QH K
Sbjct: 53 TSGYNINTRYEPKLFKIGGNGPENEGSKIVLSVVGFAADGHALKERLDTVVKMYKYQHGK 112
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+S A Q LS+ LY KRFFPYY +LGG+D +GKG +Y+YD VGSYER + G+
Sbjct: 113 DISIGACAQRLSHILYGKRFFPYYVTAILGGIDEDGKGALYSYDPVGSYEREQCRAAGAA 172
Query: 114 STLIMPFLDNQLK-------------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 160
S+LIMPFLDNQ+ S PL+ PL LVK F SA E
Sbjct: 173 SSLIMPFLDNQVNLKNQYDPTQPQGFSKEPLV------AKPLDRQHVESLVKDAFTSAVE 226
Query: 161 RDIYTGDKLEIVVLNKDGIHREYMELRKD 189
R I GD L+ +++ KDGI Y +L+KD
Sbjct: 227 RHIEVGDGLQTMIITKDGILETYADLKKD 255
>gi|354547791|emb|CCE44526.1| hypothetical protein CPAR2_403290 [Candida parapsilosis]
Length = 244
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPAMGQ 62
GYSI SR KI + D +M ++GF AD AL Y+ + N+++ + +
Sbjct: 54 GYSIQSRYEPKIHNVGDNILMTANGFAADGVALLDKFKQAFTWYKFDNGNRKLEISSAAR 113
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ + LY KRFFPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 114 YIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLD 173
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + +P D + LS E + LV+ F SA ER IY GD LEI+++ KD
Sbjct: 174 NQVNFKNQ-FVPGTDGKEKKPLKYLSLEEVIQLVRDAFNSAGERHIYVGDGLEILIVTKD 232
Query: 178 GIHREYMELRKD 189
G+ EY L++D
Sbjct: 233 GVRTEYFPLKRD 244
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ +L DK V+A +GF AD + + R YQH HNK+M A+
Sbjct: 36 SEGYNIQTRYAPKVFRLTDKAVLAVNGFAADGNMFVQKVQQRLEWYQHAHNKEMPLRAIA 95
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY KRFFPYY +N+LGG++++G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 96 RLIQTMLYAKRFFPYYVYNILGGIEDDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 155
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + LP P L E + LV F ATER I GD LEI ++
Sbjct: 156 DNQIYFKNQ--LPPSGGAHPKHLPLKEVLSLVIDSFTGATERHIEVGDGLEIYIV 208
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ +G SI +RD SK+ + ++AS+G D ++ LL R +Y+ +HNK +S A+
Sbjct: 75 ICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSLLQIRIQMYEQEHNKPISTDAL 134
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q++S +Y +RFFPY++ +L G+D GKG VY YD VG ER Y GS +++P
Sbjct: 135 AQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYDPVGHMERCRYRVLGSSGKMLLPA 194
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ L L+P D PL + A+ L + C A++RD++TGD + ++ KDGI
Sbjct: 195 LDHGLGWEHHTLVPP-DQYPPLDKERALALARNCLRVASDRDLFTGDTGVLKLITKDGIE 253
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 254 TETLPLRKD 262
>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 333
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 5/181 (2%)
Query: 10 RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTL 68
D SKI +L MAS+G QAD LQ+LL R YQ+ + ++ S ++ QLLS L
Sbjct: 157 HDESKIFQLTPHTYMASNGMQADRLQLQQLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVL 216
Query: 69 YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 128
Y++RFFPYY+FN++ GLD EG G Y+YDAVGS E + Y ++GS ++ + P LD +
Sbjct: 217 YHRRFFPYYTFNMIVGLDEEGHGVCYSYDAVGSTEPLLYGTRGSAASFVEPLLDCLINRQ 276
Query: 129 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRK 188
+ Q A + +S+ EA+ ++K F A ERDIYTGD + + + KDG+ +E LRK
Sbjct: 277 H---MTCQ-APSEMSKEEALVMLKNAFTGAAERDIYTGDSVSFITITKDGVQQESFALRK 332
Query: 189 D 189
D
Sbjct: 333 D 333
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 1/189 (0%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ +G SI +RD SK+ + ++AS+G D ++ LL R +Y+ +HNK +S A+
Sbjct: 69 ICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSLLQIRIQMYEQEHNKPISTDAL 128
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q++S +Y +RFFPY++ +L G+D GKG VY YD VG ER Y GS +++P
Sbjct: 129 AQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYDPVGHMERCRYRVLGSSGKMLLPA 188
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ L L+P D PL + A+ L + C A++RD++TGD + ++ KDGI
Sbjct: 189 LDHGLGWEHHTLVPP-DQYPPLDKERALALARNCLRVASDRDLFTGDTGVLKLITKDGIE 247
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 248 TETLPLRKD 256
>gi|358395926|gb|EHK45313.1| hypothetical protein TRIATDRAFT_131680 [Trichoderma atroviride IMI
206040]
Length = 263
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD +AL+ L IY+++H K
Sbjct: 61 TSGYSINSRMSPKVFKIGGTTASQDDATIVLSVCGFAADGEALRDRLDTICKIYRYRHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY+ +LGGLD EG G VY+YD VGSYER + G+
Sbjct: 121 PMSLNACAKRLSTILYQKRFFPYYTHAMLGGLDEEGTGAVYSYDPVGSYEREQCRAGGAA 180
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PLS + +VK F A ER I G
Sbjct: 181 GSLIMPFLDNQVNFKNQYIPGSGEGHDLKERERRPLSRPQVETIVKDAFDGAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI ++ L+KD
Sbjct: 241 DTLQMLIITKDGIEEAFLPLKKD 263
>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
Length = 261
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 4 GYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
GY+I SR K+ K+ +++ GF AD +AL++ L A +Y++QH K M
Sbjct: 61 GYNINSRYAPKVFKIGGDDDTGEGAHIILSVVGFAADGQALKERLDAVVKMYKYQHGKPM 120
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +L GLD EGKG +Y+YD VGSYER + GS ++
Sbjct: 121 SVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAAS 180
Query: 116 LIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + + D PL LV+ F SA ER I GD
Sbjct: 181 LIMPFLDNQVNFKNQYIPSSGDGHALEPKKPEPLPRETVEQLVRDAFTSAVERHIEVGDG 240
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+++V+ ++GI Y L+KD
Sbjct: 241 LQMMVITQNGIEEIYTPLKKD 261
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 5 YSILSR-DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPAMGQ 62
Y + SR D SKI +L MAS+G QAD LQ++L R YQ+ + ++ A+ Q
Sbjct: 65 YCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQMLKYRVKWYQYNNGGKVPPTKAIAQ 124
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
L+S LY++RFFPYY+FN++ GLD EG G Y+YDAVGS E Y ++GS ++ + P LD
Sbjct: 125 LMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLD 184
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
+ + AQ A +++ E + L+K F A ERDIYTGD + ++ KDG+ RE
Sbjct: 185 CLINRQH---MTAQ-APPEMTKEETLALLKNAFTGAAERDIYTGDSVSFFIITKDGVQRE 240
Query: 183 YMELRKD 189
ELRKD
Sbjct: 241 SFELRKD 247
>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
Length = 261
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
GY+I SR K+ K+ +++ GF AD +AL++ L A +Y++QH K
Sbjct: 60 AGYNINSRYVPKVFKIGGDAETGEGAHILLSVVGFAADGQALKERLDAVVRMYKYQHGKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L GLD EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGD 167
+LIMPFLDNQ+ + + + + PL A LV+ F SA ER I GD
Sbjct: 180 SLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAEPLPRATVEQLVRDAFTSAVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++V+ + GI Y L+KD
Sbjct: 240 GLQMMVITQRGIEEIYTPLKKD 261
>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
GY+I SR K+ K+ +++ GF AD +AL++ L A +Y++QH K
Sbjct: 60 AGYNINSRYVPKVFKIGGDAETGEGAHILLSVVGFAADGQALKERLDAVVRMYKYQHGKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L GLD EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGD 167
+LIMPFLDNQ+ + + + + PL A LV+ F SA ER I GD
Sbjct: 180 SLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAEPLPRATVEQLVRDAFTSAVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++V+ + GI Y L+KD
Sbjct: 240 GLQMMVITQRGIEEIYTPLKKD 261
>gi|46108556|ref|XP_381336.1| hypothetical protein FG01160.1 [Gibberella zeae PH-1]
Length = 264
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ ++ V++ GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRMSPKVFRIGGTTASQEDATLVLSVVGFAADGEALRDHLDTICKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYYS +LGGLD EG+G VY+YD VGSYER + G+
Sbjct: 122 PMSVNACAKRLSTVLYGKRFFPYYSHAMLGGLDEEGRGAVYSYDPVGSYEREQCRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PL+ E +VK F A ER I G
Sbjct: 182 GSLIMPFLDNQVNFKNQYIPGSGEGHELKERERRPLTRTEVETVVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ DGI ++ L+KD
Sbjct: 242 DNLQMLIITADGIEETFLPLKKD 264
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 7/192 (3%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQ 62
GYSI SR K+ + D VM ++GF AD AL + Y+ H K+++ + +
Sbjct: 52 GYSIQSRYQPKVFNVGDDIVMTANGFAADGAALIDRFKNQLQWYKFDHGGKKLNIKSAAR 111
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ + LY KRFFPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 112 YIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLD 171
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + P D + L+ E ++LV+ F+SATER I GD LEI+++ K+
Sbjct: 172 NQVNFKNQ-YEPGSDGKKKRELRYLTLDEVLELVRDAFSSATERHIQVGDGLEILIVTKE 230
Query: 178 GIHREYMELRKD 189
G+ EY +L++D
Sbjct: 231 GVRTEYFDLKRD 242
>gi|330914581|ref|XP_003296697.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
gi|311331038|gb|EFQ95204.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
Length = 264
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGPENKGARIVLSVVGFAADGDALKERLDTIVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS+ LY KRFFPYY +LGGLD EGKG +Y+YD VGSYER + G+
Sbjct: 122 PMSVSACAQRLSHILYNKRFFPYYVHAILGGLDEEGKGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLK--------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ S + L ++ A PL DLV+ F SA ER I
Sbjct: 182 ASLIMPFLDNQVNFKNMYEPGSGTGHELKSKQA-QPLPRDHVEDLVRDAFTSAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ K+GI + L++D
Sbjct: 241 GDGLQMMIITKEGIAETFTPLKRD 264
>gi|408398080|gb|EKJ77215.1| hypothetical protein FPSE_02589 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ ++ V++ GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRMSPKVFRIGGTTASQEDATLVLSVVGFAADGEALRDHLDTICKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYYS +LGGLD EG+G VY+YD VGSYER + G+
Sbjct: 122 PMSVNACAKRLSTVLYGKRFFPYYSHAMLGGLDEEGRGAVYSYDPVGSYEREQCRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PL+ E +VK F A ER I G
Sbjct: 182 GSLIMPFLDNQVNFKNQYIPGSGEGHELKERERRPLTRTEVETVVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ DGI ++ L+KD
Sbjct: 242 DNLQMLIITADGIEETFLPLKKD 264
>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 266
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 118/213 (55%), Gaps = 35/213 (16%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
TGYSI +R K+ K+ + V++ GF AD +AL++ L A +Y+++H K
Sbjct: 63 TGYSINTRYSPKLFKIGEDDEGGEGAHLVLSVVGFAADGRALKERLDAVVKMYKYKHGKP 122
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +LGG+D +GKG +Y+YD VGSYER + G+ +
Sbjct: 123 MSVKACAQRLSTILYSKRFFPYYVHAILGGIDEDGKGALYSYDPVGSYEREYCRAAGAAA 182
Query: 115 TLIMPFLDNQL-----------------KSP-SPLLLPAQDAVTPLSEAEAVDLVKTCFA 156
+LIMPFLDNQ+ K P P PA+D A+ LV F
Sbjct: 183 SLIMPFLDNQVNFKNQYVAGTGEGNALDKQPREPQPQPAED---------ALQLVNDAFT 233
Query: 157 SATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
SA ER I GD L+I+++ KDGI Y L+KD
Sbjct: 234 SAVERHIEVGDGLQIMLITKDGIMEMYHPLKKD 266
>gi|344305208|gb|EGW35440.1| proteasome component C5 [Spathaspora passalidarum NRRL Y-27907]
Length = 242
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPAMGQ 62
GYSI SR KI + D VM ++GF AD AL + Y+ + ++ + +
Sbjct: 52 GYSIQSRYEPKIFDVGDNIVMTANGFAADGVALIDKFRQQLKWYKFDNFGGKLEIKSAAR 111
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ + LY KRFFPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 112 YIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLD 171
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + +P D + L+ E ++LV+ F+SATER IY GD LEI ++ KD
Sbjct: 172 NQVNFKNQ-FIPGTDGKEKKPLKYLTLEEVIELVRDAFSSATERHIYVGDGLEIKIVTKD 230
Query: 178 GIHREYMELRKD 189
G+ EY L++D
Sbjct: 231 GVRTEYYPLKRD 242
>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 113/202 (55%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
GY+I SR K+ K+ +++ GF AD +AL++ L A +Y++QH K
Sbjct: 60 AGYNINSRYVPKVFKIGGDAETGEGAHILLSVVGFAADGQALKERLDAVVKMYKYQHGKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L GLD EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGD 167
+LIMPFLDNQ+ + + + + PL A LV+ F SA ER I GD
Sbjct: 180 SLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAEPLPRATVEQLVRDAFTSAVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++V+ + GI Y L+KD
Sbjct: 240 GLQMMVITQRGIEEIYTPLKKD 261
>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
Length = 259
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 117/201 (58%), Gaps = 14/201 (6%)
Query: 3 TGYSILSRDYSKIIKL-ADKC------VMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
+GY+I +R K+ K+ AD +++ GF AD +AL++ L A +Y++ H K M
Sbjct: 59 SGYNINTRFAPKVFKIGADDAGEGGHIILSVVGFSADGQALKERLDAIVKMYEYHHGKPM 118
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+ ++
Sbjct: 119 SVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREYCRAAGAAAS 178
Query: 116 LIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + A+ PLS A++LV+ F SA ER I GD
Sbjct: 179 LIMPFLDNQVNLKNQYVKSAERGDELVPRVPEPLSRDTALELVRDAFTSAVERHIEVGDG 238
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+ +++ DGI L+KD
Sbjct: 239 LQTMIITSDGIQEIITPLKKD 259
>gi|448530387|ref|XP_003870050.1| Pre7 protein [Candida orthopsilosis Co 90-125]
gi|380354404|emb|CCG23919.1| Pre7 protein [Candida orthopsilosis]
Length = 286
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPAMGQ 62
GYSI SR KI + D +M ++GF AD AL Y+ + N+++ + +
Sbjct: 96 GYSIQSRYEPKIHNVGDNILMTANGFAADGVALIDKFKQSFTWYKFDNGNRKLEISSAAR 155
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ + LY KRFFPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 156 YIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLD 215
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + +P D + LS E + LV+ F SA ER IY GD LEI+++ KD
Sbjct: 216 NQVNFKNQ-FVPGTDGKEKKPLKYLSLEEVIQLVRDAFNSAGERHIYVGDGLEILIVTKD 274
Query: 178 GIHREYMELRKD 189
G+ EY L++D
Sbjct: 275 GVRTEYYPLKRD 286
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 5 YSILSR-DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPAMGQ 62
Y + SR D SKI +L MAS+G QAD LQ++L R YQ+ + ++ A+ Q
Sbjct: 65 YCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQ 124
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
L+S LY++RFFPYY+FN++ GLD EG G Y+YDAVGS E Y ++GS ++ + P LD
Sbjct: 125 LMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLD 184
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
+ + AQ A +++ E + ++K F A ERDIYTGD + ++ KDG+ RE
Sbjct: 185 CLINRQH---MTAQ-APPEMTKEETLAMLKNAFTGAAERDIYTGDSVSFFIITKDGVQRE 240
Query: 183 YMELRKD 189
ELRKD
Sbjct: 241 SFELRKD 247
>gi|339246829|ref|XP_003375048.1| proteasome subunit beta type-1 [Trichinella spiralis]
gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
Length = 297
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 4/183 (2%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
++SR K+ +L K M +GFQ D+ L K+L R Y N+ M A QLLS
Sbjct: 119 VMSRTAPKVYRLTPKVYMTGTGFQGDMIQLVKVLRTRIQQYLFTFNEYMDIHAAAQLLSR 178
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
TLY++RFFPYY ++GG+D +G+G +Y+YD VG+ E + YS+QG GS LI PF DNQ+
Sbjct: 179 TLYFRRFFPYYVGAIIGGIDRDGRGVLYSYDPVGTIEELPYSAQGEGSYLIEPFFDNQIG 238
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
+ P Q PLS+ A L+ F S ER+ TGD +++VVL+ D + +++
Sbjct: 239 WKTQ---PEQTK-QPLSKERAQQLMHDAFISTIEREKSTGDAVQMVVLHGDRVEEHILKM 294
Query: 187 RKD 189
R D
Sbjct: 295 RTD 297
>gi|451848862|gb|EMD62167.1| hypothetical protein COCSADRAFT_38952 [Cochliobolus sativus ND90Pr]
Length = 264
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGSDSKGARIVLSVVGFAADAHALKERLDTIVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A Q LS+ LY KRFFPYY +LGGLD +GKG +Y+YD VGSYER + G+
Sbjct: 122 PMTVSACAQRLSHILYNKRFFPYYVHAILGGLDEDGKGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA--------VTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ + + P PL DLV+ F SA ER I
Sbjct: 182 ASLIMPFLDNQVNFKN-MYEPGSGVGHELKSKQAEPLPRDHVEDLVRDAFTSAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ K+GI Y L++D
Sbjct: 241 GDGLQMMIITKEGIAETYTPLKRD 264
>gi|358388877|gb|EHK26470.1| hypothetical protein TRIVIDRAFT_36186 [Trichoderma virens Gv29-8]
Length = 264
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRMAPKVFKIGGTTATQEDATIVLSVCGFAADGEALRDRLDTVCKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYY+ +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 122 PMTLNACAKRLSTILYQKRFFPYYTHAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PL+ + LVK F A ER I G
Sbjct: 182 GSLIMPFLDNQVNFKNQYIPGSGEGHALKERERHPLTRPQVETLVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+GI ++ L+KD
Sbjct: 242 DSLQMLIITKEGIEEVFLPLKKD 264
>gi|342879609|gb|EGU80854.1| hypothetical protein FOXB_08721 [Fusarium oxysporum Fo5176]
Length = 264
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ ++ V++ GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRMSPKVFRIGGTTASQEDATLVLSVVGFAADGEALRDHLDTICKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYYS +LGGLD EG+G VY+YD VGSYER + G+
Sbjct: 122 PMTVNACAKRLSTVLYSKRFFPYYSHAMLGGLDEEGRGAVYSYDPVGSYEREQCRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PL+ E +VK F A ER I G
Sbjct: 182 GSLIMPFLDNQVNFKNQYIPGSGEGHELKERERRPLTRTEVETVVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ DGI ++ L+KD
Sbjct: 242 DNLQMLIITADGIEETFLPLKKD 264
>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
Length = 241
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+T YSI SR K+ D +++++GF AD +AL K Y +N K+++ +
Sbjct: 49 TTDYSINSRYEPKVFDCGDDIIISANGFAADGEALVKRFKNSIKWYHFDNNDKKLALSSA 108
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ + + LY KRFFPYY ++ GLD EGKG VY++D VGSYER + G+ ++LIMPF
Sbjct: 109 ARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPVGSYEREFCRAGGAAASLIMPF 168
Query: 121 LDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
LDNQ+ + + V LS E + LV+ F SATER I+ GD LEI+++ K
Sbjct: 169 LDNQVNFKNQYTPDSNGKVKRPFKHLSIDEVIKLVRDAFTSATERHIHVGDGLEILIVTK 228
Query: 177 DGIHREYMELRKD 189
+G+ +E+ EL++D
Sbjct: 229 EGVRKEFYELKRD 241
>gi|336369489|gb|EGN97830.1| hypothetical protein SERLA73DRAFT_182590 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382272|gb|EGO23422.1| hypothetical protein SERLADRAFT_469320 [Serpula lacrymans var.
lacrymans S7.9]
Length = 253
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L D+ V+A +GF AD K + R Y+H H+K M A+
Sbjct: 43 SEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHSKDMPLRAIA 102
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 103 RLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 162
Query: 122 DNQL--KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
DNQ+ K+ +P L + A PL + +V F SATER I GD LE+ V+ G
Sbjct: 163 DNQIYFKNQTPALGTSHPAHLPLP--TVLSIVIDSFTSATERHIEVGDGLEMYVVLAKGR 220
Query: 180 HREYME 185
+ + +E
Sbjct: 221 NLQGLE 226
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 6/187 (3%)
Query: 5 YSILSR-DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPAMGQ 62
Y + SR D SKI +L MAS+G QAD LQ++L R YQ+ + ++ A+ Q
Sbjct: 65 YCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQ 124
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
L+S LY++RFFPYY+FN++ GLD EG G Y+YDAVGS E Y ++GS ++ + P LD
Sbjct: 125 LMSTLLYHRRFFPYYTFNMVVGLDEEGHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLD 184
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
+ + AQ A +++ E + ++K F A ERDIYTGD + ++ KDG+ RE
Sbjct: 185 CLINRQH---MTAQ-APPEMTKEETLAMLKNAFTGAAERDIYTGDSVSFFIITKDGVQRE 240
Query: 183 YMELRKD 189
ELRKD
Sbjct: 241 SFELRKD 247
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 5/180 (2%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPAMGQLLSNTLY 69
D SKI +L MAS+G QAD LQ++L R YQ+ + ++ A+ QL+S LY
Sbjct: 72 DQSKIFQLTPYTYMASNGMQADRVQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLY 131
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
++RFFPYY+FN++ GLD EG G Y+YDAVGS E Y ++GS ++ + P LD +
Sbjct: 132 HRRFFPYYTFNMIVGLDEEGNGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH 191
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+ AQ A +++ E + ++K F A ERDIYTGD + ++ KDG+ RE ELRKD
Sbjct: 192 ---MTAQ-APPEMTKEETLAMLKNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247
>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
Length = 245
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQ 62
GYSI SR SKI + D +M ++GF AD AL + Y+ +N K+++ + +
Sbjct: 55 GYSIQSRYESKIHDVGDDILMTANGFAADGIALIDRFKQSLIWYKFDNNGKKLAIKSAAR 114
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ LY KR FPYY ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 115 YIQQLLYGKRLFPYYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLD 174
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + +P D + L+ E + LV+ F SA ER IY GD LEI ++ KD
Sbjct: 175 NQVNFKNQ-FVPGTDGKEKKPLKYLTLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKD 233
Query: 178 GIHREYMELRKD 189
GI EY L++D
Sbjct: 234 GIRTEYYPLKRD 245
>gi|392572662|gb|EIW65807.1| hypothetical protein TREMEDRAFT_46043 [Tremella mesenterica DSM
1558]
Length = 270
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 105/181 (58%), Gaps = 6/181 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L D V+A++GF AD K + L YQH H+KQM A+
Sbjct: 51 SEGYSIQTRYARKVFQLTDNAVLATNGFAADGKNFVRRLKQSLEWYQHNHHKQMGLKAIA 110
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ L+ PFL
Sbjct: 111 RLIQTMLYGRRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQALVQPFL 170
Query: 122 DNQL----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
DNQ+ + P P P PLS + LV F SATER I GD +EI ++
Sbjct: 171 DNQIYFKNQQPEPGAEPFVPGRLPLS--TVLGLVVDSFTSATERHIEVGDGIEIFIVMAK 228
Query: 178 G 178
G
Sbjct: 229 G 229
>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 114/202 (56%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
GY+I SR K+ K+ + +++ GF AD +AL++ L A +Y++QH K
Sbjct: 60 AGYNINSRYVPKVFKIGGDAETGEGARILLSVVGFAADGQALKERLDAVVKMYKYQHGKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L GLD EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGD 167
+LIMPFLDNQ+ + + + + PL LV+ F SA ER I GD
Sbjct: 180 SLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAEPLPRGTVEQLVRDAFTSAVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++V+ + GI ++ L+KD
Sbjct: 240 GLQMMVITESGIEEIFIPLKKD 261
>gi|407921854|gb|EKG14992.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 266
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 117/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADK--------CVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 64 TSGYNINTRYQPKLFKIGGEGPDNEGATIVLSVVGFAADGAALKERLDTIVKMYKYQHGK 123
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS+ LY KRFFPYY +LGGLD EG+G +Y+YD VGSYER + G+
Sbjct: 124 PMSVSACAQRLSHILYGKRFFPYYVHAILGGLDEEGRGALYSYDPVGSYEREQCRAGGAA 183
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + + + PL LV F+SA ER I G
Sbjct: 184 ASLIMPFLDNQVNFKNQYIPGSGVGHALEERPRDPLPRDHVEALVHDAFSSAVERHIEVG 243
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ +DGI Y EL+KD
Sbjct: 244 DGLQMMIITRDGIQEVYKELKKD 266
>gi|440636579|gb|ELR06498.1| 20S proteasome subunit beta 6 [Geomyces destructans 20631-21]
Length = 266
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 115/204 (56%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLADK--------CVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ +++ GF AD AL++ L +Y++QH K
Sbjct: 64 TSGYNINTRYEPKVFKIGGSGSTQRDATLILSVVGFAADANALKERLDTVVKLYRYQHGK 123
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A Q LS LY KRFFPYY+ +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 124 AMTVKAAAQRLSIILYQKRFFPYYAHAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAA 183
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV--------DLVKTCFASATERDIYT 165
++LIMPFLD+Q+ + P L E E V DLVK F SA ER I
Sbjct: 184 ASLIMPFLDSQVNFKNQ-YEPGSGVGHNLKERERVLLGRDVVEDLVKDAFDSAVERHIEV 242
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L ++V+ KDGI Y L++D
Sbjct: 243 GDGLLMMVITKDGIEEIYKPLKQD 266
>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Aspergillus oryzae 3.042]
Length = 261
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 4 GYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
GY+I SR K+ K+ +++ GF AD +AL++ L A +Y++QH K M
Sbjct: 61 GYNINSRYAPKVFKIGGDDDTGEGAHIILSVVGFAADGQALKERLDAVVKMYKYQHGKPM 120
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +L GLD EG+G +Y+YD VGSYER + GS ++
Sbjct: 121 SVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGEGALYSYDPVGSYEREQCRAAGSAAS 180
Query: 116 LIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + + D PL LV+ F SA ER I GD
Sbjct: 181 LIMPFLDNQVNFKNQYIPSSGDGHALEPKKPEPLPRETVEQLVRDAFTSAVERHIEVGDG 240
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+++V+ ++GI Y L+KD
Sbjct: 241 LQMMVITQNGIEEIYTPLKKD 261
>gi|396457904|ref|XP_003833565.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
Length = 264
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 17/204 (8%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ K+ + V++ GF AD AL++ L +Y++QH K
Sbjct: 62 TSGYNINTRYAPKLFKIGGEGSDNKDARIVLSVVGFAADGDALKERLDTIVKMYKYQHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS+ LY KRFFPYY +L GLD EGKG +Y+YD VGSYER + G+
Sbjct: 122 PMSVSACAQRLSHILYNKRFFPYYVHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGAA 181
Query: 114 STLIMPFLDNQLK-----SPSPLL---LPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 165
S+LIMPFLDNQ+ P + L A+ A PL + DLV+ F SA ER I
Sbjct: 182 SSLIMPFLDNQVNFKNMYEPGSGVGHELKAKQA-EPLPQDHVEDLVRDAFTSAVERHIEV 240
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++ + +GI Y L++D
Sbjct: 241 GDGLQMMTITSEGIRESYTPLKRD 264
>gi|255720859|ref|XP_002545364.1| proteasome component C5 [Candida tropicalis MYA-3404]
gi|240135853|gb|EER35406.1| proteasome component C5 [Candida tropicalis MYA-3404]
Length = 245
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 113/193 (58%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
TGYSI SR K+ + D +M ++GF AD AL + Y+ + K+++ +
Sbjct: 54 TGYSIQSRYEPKVHDVGDDILMTANGFAADGVALIDRFKQSLIWYKFDNGGKKLTIKSAA 113
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFP+Y ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFL
Sbjct: 114 RYIQHLLYGKRFFPFYVSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFL 173
Query: 122 DNQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + +P D + LS E + LV+ F SA ER IY GD LEI ++ K
Sbjct: 174 DNQVNFKNQ-FVPGTDGKEKKPLKYLSLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTK 232
Query: 177 DGIHREYMELRKD 189
DGI EY L++D
Sbjct: 233 DGIRTEYYPLKRD 245
>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 261
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 114/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADK--------CVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I SR K+ K+ + +++ GF AD AL++ L A +Y++QH K
Sbjct: 59 TSGYNINSRYVPKVFKIGGEDETGKGAHILLSVVGFAADGLALKERLDAVVKMYKYQHGK 118
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS LY KRFFPYY +L GLD EGKG +Y YD VGSYER S G+
Sbjct: 119 PMSVRACAQRLSTILYQKRFFPYYVQAILAGLDEEGKGALYGYDPVGSYEREQCRSAGAA 178
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
S+LIMPFLDNQ+ + + + + P+S LV+ F SA ER I G
Sbjct: 179 SSLIMPFLDNQVNLKNQYIPGSGEGHALEARKPEPMSRETVEQLVRDAFTSAVERHIEVG 238
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++V+ DGI Y L+KD
Sbjct: 239 DGLQMLVITADGIEEVYHPLKKD 261
>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
Length = 261
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 114/201 (56%), Gaps = 15/201 (7%)
Query: 4 GYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM 55
GY+I +R K+ K+ + +++ GF AD AL++ L A +Y++QH K M
Sbjct: 61 GYNINTRYDPKVFKIGGDDETGEGAQILLSVVGFAADGHALKERLDAVVKMYKYQHGKPM 120
Query: 56 SCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
S A Q LS LY KRFFPYY +L GLD +GKG +Y+YD VGSYER + GS ++
Sbjct: 121 SVTACAQRLSTILYQKRFFPYYVHAILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAAS 180
Query: 116 LIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDK 168
LIMPFLDNQ+ + + + + PL A LV+ F SA ER I GD
Sbjct: 181 LIMPFLDNQVNFKNQYIPGSGEGHALEPKKPEPLPRATVERLVRDAFTSAVERHIEVGDG 240
Query: 169 LEIVVLNKDGIHREYMELRKD 189
L+++V+ +DGI Y L+KD
Sbjct: 241 LQMMVITRDGIEEIYTPLKKD 261
>gi|409040369|gb|EKM49857.1| hypothetical protein PHACADRAFT_265596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 252
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 105/186 (56%), Gaps = 18/186 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ KL D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 42 SEGYSIQTRYAPKVHKLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G +Y++D VGSYER + G+ L+ PFL
Sbjct: 102 RLIQTMLYGQRFFPYYVYNILGGIEEDGTGAIYSFDPVGSYERETCRAAGAAMALVQPFL 161
Query: 122 DNQL---------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 172
DNQ+ SP P+ LP QD ++ +V F SATER I GD LEI
Sbjct: 162 DNQIYFKNQQAPADSPHPVHLPLQDVLS---------IVIDSFTSATERHIEVGDGLEIY 212
Query: 173 VLNKDG 178
V+ G
Sbjct: 213 VILAKG 218
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 108/167 (64%), Gaps = 5/167 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S Y I +R +K+ KL DKC++ +SG QAD+ ALQ +L + +Y+ HN++ + A+
Sbjct: 35 LSQRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQSVLERQIELYRFTHNREPTFNAI 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY+FN+L G+D +GKG V YDAVG+Y Y++QG+ S+L++
Sbjct: 95 AQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 167
LDN L + + P +++ L V+LVK SA ERDI TG+
Sbjct: 155 LDNLLNGNNQKVKPEVNSLEDL-----VNLVKNAMVSAVERDICTGN 196
>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
Length = 261
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKL-ADK-------CVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ AD+ ++ GF AD +AL++ L A +Y++ HNK
Sbjct: 60 SGYNINTRYAPKVFKIGADEHTGEGGHIILCVVGFSADGRALKERLDAIVKMYEYHHNKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L G+D EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPS---PLLLPAQDAVT----PLSEAEAVDLVKTCFASATERDIYTGD 167
+L+MPFLDNQ+ + P +V PLS A LV F S+ ER I GD
Sbjct: 180 SLMMPFLDNQVNFKNQYVPGSGQGNASVARKPEPLSREGAQQLVHDAFTSSVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+I+++ KDGI Y L++D
Sbjct: 240 GLQIMIVTKDGIEEVYRPLKRD 261
>gi|449548524|gb|EMD39490.1| hypothetical protein CERSUDRAFT_80861 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 42 SEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 102 RLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 161
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 176
DNQ+ + P Q L ++ + +V F SATER I GD LEI VVL K
Sbjct: 162 DNQIYFKNQAAAPNQPHPAHLPLSDVLAIVIDSFTSATERHIEVGDGLEIYVVLAK 217
>gi|322708662|gb|EFZ00239.1| proteasome component C5 [Metarhizium anisopliae ARSEF 23]
Length = 263
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 114/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD AL+ L IY+++H K
Sbjct: 61 TSGYSINSRMAPKVFKIGGSTSSQDDATIVLSVCGFAADGTALRDQLDTICKIYRYRHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYY +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 121 PMTLNACAKRLSTILYQKRFFPYYVTAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAA 180
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PLS A+ ++K F A ER I G
Sbjct: 181 GSLIMPFLDNQVNFKNQYVPGSGEGHNLQERERHPLSRAQVETIIKDAFDGAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI + ++KD
Sbjct: 241 DALQMLIITKDGIEETILPMKKD 263
>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A +GF AD K + R Y+H H K M A+
Sbjct: 45 SEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPIRAIA 104
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 105 RLIQTMLYSRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 164
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKD 177
DNQ+ + P LS + + LV F SATER I GD LE+ +VL K+
Sbjct: 165 DNQIYFKNQTPAPGTSFPGHLSLSTVLSLVIDSFTSATERHIEVGDGLEMYIVLAKN 221
>gi|238881595|gb|EEQ45233.1| proteasome component C5 [Candida albicans WO-1]
Length = 244
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 113/192 (58%), Gaps = 8/192 (4%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQ 62
GYSI SR SKI + D +M ++GF AD AL + Y+ +N K+++ + +
Sbjct: 55 GYSIQSRYESKIHDVGDDILMTANGFAADGVALIDRFKQSLIWYKFDNNGKKLAIKSAAR 114
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ LY KRFFPY S ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 115 YIQQLLYGKRFFPYVS-TLIAGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLD 173
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + +P D + L+ E + LV+ F SA ER IY GD LEI ++ KD
Sbjct: 174 NQVNFKNQ-FVPGTDGKEKKPLKFLTLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKD 232
Query: 178 GIHREYMELRKD 189
GI EY L++D
Sbjct: 233 GIRTEYYPLKRD 244
>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 256
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 104/177 (58%), Gaps = 1/177 (0%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A +GF AD K + R Y+H H K M A+
Sbjct: 45 SEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPIRAIA 104
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 105 RLIQTMLYSRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 164
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKD 177
DNQ+ + P LS + + LV F SATER I GD LE+ +VL K+
Sbjct: 165 DNQIYFKNQTPAPGTSFPGHLSLSTVLSLVIDSFTSATERHIEVGDGLEMYIVLAKN 221
>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 117/202 (57%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKL-ADK-------CVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I SR K+ K+ AD+ ++ GF AD +AL++ L A +Y++ HNK
Sbjct: 60 SGYNINSRYAPKVFKIGADEHTGEGGHIILCVVGFSADGRALKERLDAIVKMYEYHHNKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L G+D EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPS---PLLLPAQDAVT----PLSEAEAVDLVKTCFASATERDIYTGD 167
+L+MPFLDNQ+ + P +V PLS A LV F S+ ER I GD
Sbjct: 180 SLMMPFLDNQVNFKNQYVPGSGQGNASVARKPEPLSREGAQQLVHDAFTSSVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++++ KDGI Y L++D
Sbjct: 240 GLQMMIVTKDGIEEVYRPLKRD 261
>gi|425770053|gb|EKV08528.1| hypothetical protein PDIP_68200 [Penicillium digitatum Pd1]
gi|425771744|gb|EKV10181.1| hypothetical protein PDIG_58720 [Penicillium digitatum PHI26]
Length = 259
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 116/205 (56%), Gaps = 19/205 (9%)
Query: 2 STGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I SR K+ K+ +++ GF AD AL++ L +Y++QH K
Sbjct: 57 TSGYNINSRMVPKVFKIGGDDETGEGATIILSVVGFAADGNALKEKLDTVVKMYKYQHGK 116
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A Q LS LY KRFFPYY +L GLD EG G +Y+YD VGSYER + G+
Sbjct: 117 SMSVGACAQRLSTILYEKRFFPYYVHAILAGLDEEGVGALYSYDPVGSYEREQCRAAGAA 176
Query: 114 STLIMPFLDNQLKSPSP---------LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 164
S+LIMPFLDNQ+ S + L+P + PL + A LV+ F SA ER I
Sbjct: 177 SSLIMPFLDNQVNSKNQYIPGSGEGHALVPKK--AEPLDKETAKKLVQDAFTSAVERHIE 234
Query: 165 TGDKLEIVVLNKDGIHREYMELRKD 189
GD L+++++ ++GI + L++D
Sbjct: 235 VGDGLQMLIVTREGIEEVFHALKQD 259
>gi|322698009|gb|EFY89783.1| proteasome component C5 [Metarhizium acridum CQMa 102]
Length = 263
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 114/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADKC--------VMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD AL+ L IY+++H K
Sbjct: 61 TSGYSINSRMAPKVFKIGGSTASQDDATIVLSVCGFAADGTALRDQLDTICKIYRYRHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYY +LGGLD EGKG VY+YD VGSYER + G+
Sbjct: 121 PMTLNACAKRLSTILYQKRFFPYYVTAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAA 180
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTG 166
+LIMPFLDNQ+ + + + + PLS A+ ++K F A ER I G
Sbjct: 181 GSLIMPFLDNQVNFKNQYVPGSGEGHDLQERERHPLSRAQVETIIKDAFDGAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ KDGI + ++KD
Sbjct: 241 DALQMLIITKDGIEETILPMKKD 263
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+ILSR+ +++ +L+ +A++G AD + L +LL Y+ + + M A+
Sbjct: 55 LSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAV 114
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
++LS LYY+R FP+Y+FN++GGLD EG G VY YDAVGS+ERV + G G +L+ P
Sbjct: 115 SRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERVRVACAGGGLSLMQPV 174
Query: 121 LDNQLKSPSPL-------LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
LD +L + + + V + EA+ LV+ F + ERDI GD++EIVV
Sbjct: 175 LD-RLDAAEAVTGAGGCGRAGREQPVVAVGLEEALALVRRAFVAGGERDISLGDEVEIVV 233
Query: 174 LNKDGIHREYMELR 187
+ + G RE ++L+
Sbjct: 234 VTRQGHRRERLQLK 247
>gi|401887735|gb|EJT51714.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 2479]
Length = 251
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ +L DK V+A++GF AD K + R Y+ H+KQMS ++
Sbjct: 30 SQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHKQMSIKSIA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +LI PFL
Sbjct: 90 RMIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLIQPFL 149
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 176
DNQ+ + P P L + +V F SATER I GD LE+ +V+NK
Sbjct: 150 DNQIYFRNQTFPPGVPRPIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEMYIVMNK 207
>gi|406699677|gb|EKD02876.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 8904]
Length = 251
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ +L DK V+A++GF AD K + R Y+ H+KQMS ++
Sbjct: 30 SQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHKQMSIKSIA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY +RFFPYY +N+LGG++ +G G +Y++D VGSYER + G+ +LI PFL
Sbjct: 90 RMIQTMLYGRRFFPYYVYNILGGIEEDGTGAIYSFDPVGSYEREACRAAGAAQSLIQPFL 149
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 176
DNQ+ + P P L + +V F SATER I GD LE+ +V+NK
Sbjct: 150 DNQIYFKNQTFPPGVPRPIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEMYIVMNK 207
>gi|358373509|dbj|GAA90107.1| proteasome component Prs3 [Aspergillus kawachii IFO 4308]
Length = 260
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 112/202 (55%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
GY+I SR K+ K+ V++ GF AD +AL++ L A +Y++QH K
Sbjct: 59 AGYNINSRYVPKVFKIGGDDESGEGANIVLSVVGFAADGQALKERLDAVVKMYKYQHGKP 118
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L GLD +GKG +Y+YD VGSYER + GS +
Sbjct: 119 MSVRACAQRLSTILYQKRFFPYYVHAILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAA 178
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGD 167
+LIMPFLDNQ+ + + + + PL LV+ F SA ER I GD
Sbjct: 179 SLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAEPLPRDTVEQLVRDAFTSAVERHIEVGD 238
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++V+ + GI Y L+KD
Sbjct: 239 GLQMMVITRSGIEEIYYPLKKD 260
>gi|302412397|ref|XP_003004031.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
gi|261356607|gb|EEY19035.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
Length = 264
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLA-------DKCVMASS-GFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ D ++ S GF AD +AL++ L A IY+H+H K
Sbjct: 62 TSGYSINSRYSPKVYKIGGTTSNQDDATILLSVVGFAADGEALKERLDAICKIYRHRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY + +LGGLD +G G V++YD VGSYER + G+
Sbjct: 122 AMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEKGVGAVFSYDPVGSYEREQSRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LI PFLDNQ+ + + + + V PL EA LVK F A ER I G
Sbjct: 182 ASLITPFLDNQVNFKNQYVPGSGVGHELKEREVVPLERKEAEILVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++V+ GI + L+KD
Sbjct: 242 DALQMMVITSKGIEEILLPLKKD 264
>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
Length = 261
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKL-ADK-------CVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ AD+ ++ GF AD +AL++ L A +Y++ HNK
Sbjct: 60 SGYNINTRYAPKVFKIGADEHTGEGGHMILCVVGFSADGRALKERLDAIVKMYEYHHNKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L G+D EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDAVT-------PLSEAEAVDLVKTCFASATERDIYTGD 167
+L+MPFLDNQ+ + + + PLS A LV F S+ ER I GD
Sbjct: 180 SLMMPFLDNQVNFKNQYVAGSGQGNASVPRKPEPLSREGAQQLVHDAFTSSVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++++ KDGI Y L++D
Sbjct: 240 GLQMMIVTKDGIEEVYRPLKRD 261
>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
Length = 261
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 117/202 (57%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKL-ADK-------CVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ AD+ ++ GF AD +AL++ L A +Y++ HNK
Sbjct: 60 SGYNINTRYAPKVFKIGADEHTGEGGHIILCVVGFSADGRALKERLDAIVKMYEYHHNKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L G+D EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPS---PLLLPAQDAVT----PLSEAEAVDLVKTCFASATERDIYTGD 167
+L+MPFLDNQ+ + P +V PLS A LV F S+ ER I GD
Sbjct: 180 SLMMPFLDNQVNFKNQYVPGSGQGNASVARKPEPLSREGAQQLVHDAFTSSVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++++ KDGI Y L++D
Sbjct: 240 GLQMMIVTKDGIEEVYRPLKRD 261
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+I +R+ SK+ KL CV+ +SG QAD+ AL L + +Y+ +H+++ +
Sbjct: 34 LSIGYAIHTRNVSKLKKLTQTCVIGTSGMQADMHALHSALERQIELYRFKHHREPGISVI 93
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
QLLS LY +RFFPYY+FN+L G+D G+G +DA+G+Y Y ++G+ S+LIM
Sbjct: 94 AQLLSTILYSRRFFPYYTFNILCGVDENGRGITCGFDAIGNYGFDAYMAKGTSSSLIMSI 153
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
LDN L S + Q S E ++++K SA ERDI+TGD E++V++
Sbjct: 154 LDNHLTSRNQ-----QKHNEIQSLEELINVIKGAMTSAVERDIFTGDAAEVIVID 203
>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
gi|350630872|gb|EHA19244.1| hypothetical protein ASPNIDRAFT_54260 [Aspergillus niger ATCC 1015]
Length = 260
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
GY+I SR K+ K+ V++ GF AD +AL++ L A +Y++QH K
Sbjct: 59 AGYNINSRYVPKVFKIGGDDESGEGANIVLSVVGFAADGQALKERLDAVVKMYKYQHGKP 118
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L GLD +GKG +Y+YD VGSYER + GS +
Sbjct: 119 MSVRACAQRLSTILYQKRFFPYYVHAILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAA 178
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGD 167
+LIMPFLDNQ+ + + + + PL LV+ F SA ER I GD
Sbjct: 179 SLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAEPLPRDTVEQLVRDAFTSAVERHIEVGD 238
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++V+ + G+ Y L+KD
Sbjct: 239 GLQMMVITRSGVEEIYYPLKKD 260
>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 252
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 42 SEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 102 RLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 161
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
DNQ+ + Q T L + + +V F SATER I GD LEI V+ G
Sbjct: 162 DNQIYFKNQTAAVGQSHPTHLPLPDVLAIVIDSFTSATERHIEVGDGLEIYVVVAKG 218
>gi|380480528|emb|CCF42385.1| proteasome A-type and B-type [Colletotrichum higginsianum]
Length = 263
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLA-------DKCVMASS-GFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ D +M S GF AD +AL+ L IY+++H K
Sbjct: 61 TSGYSINSRYTPKVFKIGGTTSTQEDATIMLSVVGFAADGEALRDRLDTICKIYRYRHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY + +LGGLD EG G V++YD VGSYER + G+
Sbjct: 121 PMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEEGVGAVFSYDPVGSYEREQSRAGGAA 180
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LI PFLDNQ+ + + + + PL EA LVK F A ER I G
Sbjct: 181 ASLITPFLDNQVNFKNQYIPGSGVGHELQERPRVPLERKEAEILVKDAFDGAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+GI + L+KD
Sbjct: 241 DHLQMMIITKNGIEEVLLPLKKD 263
>gi|344249385|gb|EGW05489.1| Proteasome subunit beta type-1 [Cricetulus griseus]
Length = 140
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 95/145 (65%), Gaps = 6/145 (4%)
Query: 46 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 105
+Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R
Sbjct: 1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60
Query: 106 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIY 164
+ + GS S ++ P LDNQ+ + Q+ PLS A+ LVK F SA ERD+Y
Sbjct: 61 SFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLSLDRAMRLVKDVFISAAERDVY 115
Query: 165 TGDKLEIVVLNKDGIHREYMELRKD 189
TGD L I ++ K+GI E + LRKD
Sbjct: 116 TGDALRICIVTKEGIREETVPLRKD 140
>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
Length = 266
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 33/212 (15%)
Query: 3 TGYSILSRDYSKIIKLA--DKC------VMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ D+C V++ GF AD +AL++ L A +Y+++H K
Sbjct: 63 SGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFAADGRALKERLDAIVKMYKYKHGKP 122
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q L+ LY KRFFPYY +L G+D +GKG +Y+YD VGSYER + G+ +
Sbjct: 123 MSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAA 182
Query: 115 TLIMPFLDNQL-----------------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 157
+LIMPFLDNQ+ K P P P +D A+ LV F S
Sbjct: 183 SLIMPFLDNQVNFKNQYLPGSGEGNAMDKQPRPSEPPPRDV--------ALQLVNDAFTS 234
Query: 158 ATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
A ER I GD L+++V+ ++GI Y L+KD
Sbjct: 235 AVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+ILSR+ K+ + DK V A+SG ADV+ L K + Y + K+++
Sbjct: 35 LSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLIKHMKIESTEYYLKTQKEIAIEQF 94
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS +YY+R FP+Y+ +++ G+D+EGKG VY+YD +GS R Y S G+G+ +I P
Sbjct: 95 IRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAVYSYDVIGSTLRTRYGSAGTGNAMICPI 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + S + ++ A +L+++ F S ERDIYTGD + + ++ DGI
Sbjct: 155 LDEAILSKNE---------AEITREFAFELIQSAFRSCAERDIYTGDSVVAMCISADGIQ 205
Query: 181 REYMELRKD 189
ELRKD
Sbjct: 206 ERTFELRKD 214
>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
Length = 252
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 5/178 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L ++ V+A +GF AD K + R Y+H H K+M A+
Sbjct: 42 SEGYSIQTRYAPKVFRLTERAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKEMPLRAIA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 102 RLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 161
Query: 122 DNQL--KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 176
DNQ+ K+ +P + PL+ + + +V F SATER I GD LEI VVL K
Sbjct: 162 DNQIYFKNQTPAAGSSHPTHLPLN--DVLSIVIDSFTSATERHIEVGDGLEIYVVLAK 217
>gi|395325433|gb|EJF57855.1| proteasome subunit [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 42 SEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 102 RLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 161
Query: 122 DNQL--KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
DNQ+ K+ + A PLS+ A+ V F SATER I GD LEI V+ G
Sbjct: 162 DNQIYFKNQKAAAGQSHPAHLPLSDVLAI--VIDSFTSATERHIEVGDGLEIYVVVAKGR 219
Query: 180 HREYMELRKD 189
+ +E ++
Sbjct: 220 SPQGLETMRN 229
>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 117/202 (57%), Gaps = 15/202 (7%)
Query: 3 TGYSILSRDYSKIIKL-ADK-------CVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ AD+ ++ GF AD +AL++ L A +Y++ HNK
Sbjct: 60 SGYNINTRYAPKVFKIGADEHTGEGGHIILCVVGFSADGRALKERLDAIVKMYEYHHNKP 119
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +L G+D EGKG +Y+YD VGSYER + GS +
Sbjct: 120 MSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEGKGALYSYDPVGSYEREFCRAAGSAA 179
Query: 115 TLIMPFLDNQLKSPS---PLLLPAQDAVT----PLSEAEAVDLVKTCFASATERDIYTGD 167
+L+MPFLDNQ+ + P +V PLS A LV F S+ ER I GD
Sbjct: 180 SLMMPFLDNQVNFKNQYVPGSGQGNASVARKPEPLSREGAQQLVHDAFTSSVERHIEVGD 239
Query: 168 KLEIVVLNKDGIHREYMELRKD 189
L+++++ +DGI Y L++D
Sbjct: 240 GLQMMIVTRDGIEEVYRPLKRD 261
>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 224
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 4/188 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S YSI SR ++I K+ C+++++GF D+ A + + L Y++QH +MS ++
Sbjct: 40 LSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFITRMRSILLNYENQHFHEMSVESV 99
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ +SNTLY KRFFPYY ++GG+++EGKG +Y YD VG+ E + Y S GSGS+L P
Sbjct: 100 ARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYDPVGTIEDLHYDSNGSGSSLAAPL 159
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+ + P +S +A ++V+ S TERDIYTGD L++ V KDG
Sbjct: 160 LDSAFGTIHHNTRP----FPAVSLQDAKNIVRDAICSVTERDIYTGDALQLCVFTKDGFA 215
Query: 181 REYMELRK 188
+E L +
Sbjct: 216 QEEFPLPR 223
>gi|149047100|gb|EDL99820.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
gi|149047101|gb|EDL99821.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
Length = 140
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 95/145 (65%), Gaps = 6/145 (4%)
Query: 46 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 105
+Y+H +NK M+ A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R
Sbjct: 1 MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60
Query: 106 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIY 164
+ + GS S ++ P LDNQ+ + Q+ PL+ A+ LVK F SA ERD+Y
Sbjct: 61 SFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVY 115
Query: 165 TGDKLEIVVLNKDGIHREYMELRKD 189
TGD L I ++ K+GI E + LRKD
Sbjct: 116 TGDALRICIVTKEGIREETVPLRKD 140
>gi|400601377|gb|EJP69020.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 262
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADK--------CVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD AL+ L IY+++H K
Sbjct: 60 TSGYSINSRMAPKVFKIGGTNASQDDATIVLSVCGFAADGDALRDRLDTICKIYRYRHGK 119
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYY+ +LGGLD EGKG +Y+YD VGSYER + G+
Sbjct: 120 PMTLNACAKRLSTILYQKRFFPYYTHALLGGLDEEGKGAIYSYDPVGSYEREQCRAGGAA 179
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + + + PL+ + ++K F A ER I G
Sbjct: 180 ASLIMPFLDNQVNFRNQYIPGSGTGHDLQERPREPLTRPQVETIIKDAFDGAAERHIEVG 239
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L++++++K+GI ++ L+KD
Sbjct: 240 DALQMLIVSKNGIEEVFVPLKKD 262
>gi|310793289|gb|EFQ28750.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 263
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLA-------DKCVMASS-GFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ D ++ S GF AD +AL+ L IY+++H K
Sbjct: 61 TSGYSINSRYTPKVFKIGGTTSTQEDATILLSVVGFAADGEALKDRLDTICKIYRYRHGK 120
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY + +LGGLD EG G V++YD VGSYER + G+
Sbjct: 121 PMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEEGVGAVFSYDPVGSYEREQSRAGGAA 180
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LI PFLDNQ+ + + + + PL EA LVK F A ER I G
Sbjct: 181 ASLITPFLDNQVNFKNQYVPGSGVGHELQERPRVPLERKEAEILVKDAFDGAVERHIEVG 240
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++V+ K+GI + L+KD
Sbjct: 241 DHLQMMVITKNGIEEVLLPLKKD 263
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 9/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GY+ILSR+ K+ + DK V A+SG ADV+ L K + Y + K+++
Sbjct: 75 LSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQF 134
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS +YY+R FP+Y+ +++ G+D+EG+G VY+YD +GS R Y S G+G+ +I P
Sbjct: 135 IRLLSAMMYYRRSFPWYTSSIVAGIDSEGRGAVYSYDVIGSTLRTRYGSAGTGNAMICPI 194
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + S + ++ A +L+++ F S ERDIYTGD + + ++ DGI
Sbjct: 195 LDEAILSKNE---------AEITREFAFELIQSAFRSCAERDIYTGDSVVAMCISADGIQ 245
Query: 181 REYMELRKD 189
ELRKD
Sbjct: 246 ERTFELRKD 254
>gi|225680770|gb|EEH19054.1| proteasome subunit beta type-1-A [Paracoccidioides brasiliensis
Pb03]
gi|226292463|gb|EEH47883.1| proteasome component C5 [Paracoccidioides brasiliensis Pb18]
Length = 266
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 117/204 (57%), Gaps = 17/204 (8%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
TGYSI +R K+ K+ + V++ GF AD +AL++ L A +Y+++H K
Sbjct: 63 TGYSINTRYSPKLFKIGEDGEGGEGAHLVLSVVGFAADGRALKERLDAVVKMYKYKHGKP 122
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q LS LY KRFFPYY +LGG+D +G+G +Y+YD VGSYER + G+ +
Sbjct: 123 MSVKACAQRLSTILYSKRFFPYYVHAILGGIDEDGRGALYSYDPVGSYEREYCRAAGAAA 182
Query: 115 TLIMPFLDNQLKSPSPLL--------LPAQDAVTPLSEAE-AVDLVKTCFASATERDIYT 165
+LIMPFLDNQ+ + + L Q AE A+ LV F SA ER I
Sbjct: 183 SLIMPFLDNQVNFKNQYVSGPGEGNALDKQPRQPQPQPAEDALQLVNDAFTSAVERHIEV 242
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+I+++ KDGI Y L+KD
Sbjct: 243 GDGLQIMLITKDGIMEMYHPLKKD 266
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A +GF AD K + R Y+H H+K M A+
Sbjct: 38 SEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHSKDMPIRAIA 97
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 98 RLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLMQPFL 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKD 177
DNQ+ + P L + LV F ATER I GD LE+ VVL ++
Sbjct: 158 DNQIYFKNQTPAPGTSFPQHLPLNTVLSLVIDSFTGATERHIEVGDSLEMYVVLARE 214
>gi|346975013|gb|EGY18465.1| proteasome component C5 [Verticillium dahliae VdLs.17]
Length = 264
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLA-------DKCVMASS-GFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ D ++ S GF AD +AL++ L A IY+++H K
Sbjct: 62 TSGYSINSRYSPKVYKIGGTTSNQDDATILLSVVGFAADGEALKERLDAICKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY + +LGGLD +G G V++YD VGSYER + G+
Sbjct: 122 AMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEKGVGAVFSYDPVGSYEREQSRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LI PFLDNQ+ + + + + V PL EA LVK F A ER I G
Sbjct: 182 ASLITPFLDNQVNFKNQYVPGSGVGHELKEREVVPLERKEAEILVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++V+ GI + L+KD
Sbjct: 242 DALQMMVITSKGIEEILLPLKKD 264
>gi|346320799|gb|EGX90399.1| proteasome component C5 [Cordyceps militaris CM01]
Length = 262
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLADK--------CVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ V++ GF AD AL+ L IY+++H K
Sbjct: 60 TSGYSINSRMAPKVFKIGGTNASQDDATIVLSVCGFAADGDALRDRLDTICKIYRYRHGK 119
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
M+ A + LS LY KRFFPYY+ +LGGLD EG G VY+YD VGSYER + G+
Sbjct: 120 PMTLNACAKRLSTILYQKRFFPYYTHALLGGLDEEGVGAVYSYDPVGSYEREQCRAGGAA 179
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LIMPFLDNQ+ + + + + PLS + ++K F A ER I G
Sbjct: 180 ASLIMPFLDNQVNFRNQYVPGSGIGHNLKERPHAPLSRVQVETIIKDAFDGAAERHIEVG 239
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+GI ++ L+KD
Sbjct: 240 DSLQMLIVTKNGIEEVFVPLKKD 262
>gi|323334738|gb|EGA76111.1| Pre7p [Saccharomyces cerevisiae AWRI796]
Length = 184
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 105/181 (58%), Gaps = 5/181 (2%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLYYKR 72
+ D VM+++GF AD AL K Y HN K++S + + + + LY KR
Sbjct: 4 RFFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKR 63
Query: 73 FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 132
FFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIMPFLDNQ+ +
Sbjct: 64 FFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYE 123
Query: 133 LPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRK 188
V LS E + LV+ F SATER I GD LEI+++ KDG+ +E+ EL++
Sbjct: 124 PGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKR 183
Query: 189 D 189
D
Sbjct: 184 D 184
>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
gi|353229361|emb|CCD75532.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
Length = 212
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 109/185 (58%), Gaps = 6/185 (3%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ ILSR+ ++ KL ++ +GF DV L KLL + +++ H K +S A+ LL
Sbjct: 34 FVILSRNSPRLFKLGPGNILGCAGFHGDVLTLTKLLENKVKTFRYDHGKNISTKALAGLL 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S TLY +RFFP+Y NVL GLD EG+G +Y+YD VGSYE GY + GS S ++ PFLD+
Sbjct: 94 SVTLYNRRFFPFYVSNVLVGLD-EGRGVLYSYDPVGSYESEGYRASGSSSAILQPFLDST 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + + ++ V+ L + AV L F SA ERDI GD + I + KDG+
Sbjct: 153 VGNKT-----SKYHVSRLDKETAVKLTHDIFISAAERDIQCGDSVIICTITKDGLSEVSY 207
Query: 185 ELRKD 189
LR+D
Sbjct: 208 PLRRD 212
>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 257
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 101/177 (57%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ +L D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 47 SEGYNIQTRYAPKVFRLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHGKDMPLRAIA 106
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 107 RLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 166
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
DNQ+ + P T L + +V F SATER I GD LE+ ++ G
Sbjct: 167 DNQIYFKNQTAPPDSAHPTHLPLPTVLSIVIDSFTSATERHIEVGDGLEMYIVLARG 223
>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
Length = 276
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 106/189 (56%), Gaps = 9/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S +SI +RD K KL DK V+ SGF D L K++ R + NK M A+
Sbjct: 56 LSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIETRL-----KMNKAMRTGAV 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS +RFFPYY +N++GGLD EGKG VY++D VGSY+R + S S + P
Sbjct: 111 AAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSVKAGASASATLQPL 170
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L NQ + + + V P A+ LVK F SA ERD+YTGD L I ++ K+GI
Sbjct: 171 LHNQTGFRR---MQSVEHV-PRILDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIR 226
Query: 181 REYMELRKD 189
E + LRKD
Sbjct: 227 EETVPLRKD 235
>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 243
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 112/192 (58%), Gaps = 8/192 (4%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPAMGQ 62
GYSI SR ++ + D +M ++GF AD AL Y+ + N+++ + +
Sbjct: 54 GYSIQSRYEPRVHNVGDNILMTANGFAADGVALIDRFKQSFKWYKFDNENRKLEISSAAR 113
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+ + LY KRFFPY S ++ GLD EGKG VY+YD VGSYER + G+ ++LIMPFLD
Sbjct: 114 YIQHLLYGKRFFPYVS-TLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLD 172
Query: 123 NQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
NQ+ + +P D + LS E + LV+ F SA ER IY GD LEI+++ KD
Sbjct: 173 NQVNFKNQ-YVPGTDGKEKKPLKYLSLEEVIQLVRDAFTSAGERHIYVGDGLEIMIVTKD 231
Query: 178 GIHREYMELRKD 189
G+ EY L++D
Sbjct: 232 GVRTEYFPLKRD 243
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 111/193 (57%), Gaps = 7/193 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMG 61
GYSI SR ++ + D +M ++GF AD AL Y+ H K++S +
Sbjct: 50 VGYSINSRYEPRVFDVGDNILMTANGFSADGNALINKFKNSLKWYKFDHGGKKLSIKSAA 109
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ + + LY KRFFP+Y ++ GL++EGKG VY+YD VGSYE + G+ ++LIMPFL
Sbjct: 110 RYIQHLLYGKRFFPFYVSTLIAGLNDEGKGVVYSYDPVGSYEVEQCRAGGAAASLIMPFL 169
Query: 122 DNQLKSPSPLLLPAQDA-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + P + + LS E V LV+ F S TER IY GD LEI ++NK
Sbjct: 170 DNQVNFKNQ-YEPGTNGEKKKELRYLSLDEVVQLVRDAFTSVTERHIYVGDGLEIYIVNK 228
Query: 177 DGIHREYMELRKD 189
DG+ EY L++D
Sbjct: 229 DGVKVEYYPLKRD 241
>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
Length = 258
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 5 YSILSR-DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQ 62
+ I SR D SK+ +L D +AS+G QAD LQ++L R YQ+ + ++ S A+ +
Sbjct: 76 FCIHSRNDRSKLFQLTDHVFLASTGMQADRLQLQQMLKYRIQWYQYNNGGEVPSTRAIAK 135
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
L S LY +RFFPYY+FN++ GLD +G G Y+YD VGS E Y + GS S+ I P +D
Sbjct: 136 LTSTILYQRRFFPYYTFNMIVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFIEPLMD 195
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
L + Q A L EA++++K+ F A ERDI+TGD + ++ +G+ E
Sbjct: 196 CLLTRQHMV----QQAPAELGMNEALEMLKSAFTGAAERDIFTGDSVCFHIITTEGVRTE 251
Query: 183 YMELRKD 189
+ ELRKD
Sbjct: 252 FFELRKD 258
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 33/212 (15%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ + V++ GF AD +AL++ L A +Y+++H K
Sbjct: 63 SGYNINTRYAPKLFKIGEDNEGGEGAHLVLSVVGFAADGRALKERLDAIVKMYKYRHGKP 122
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q L+ LY KRFFPYY +L G+D EGKG +Y+YD VGSYER + G+ +
Sbjct: 123 MSVKACAQRLATILYSKRFFPYYVHAILAGIDEEGKGALYSYDPVGSYEREYCRAAGAAA 182
Query: 115 TLIMPFLDNQL-----------------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 157
+LIMPFLDNQ+ K P + P +D A+ LVK F S
Sbjct: 183 SLIMPFLDNQVNFKNQFIPGSGEGNAMDKQPREPVPPPRDV--------ALQLVKDAFTS 234
Query: 158 ATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
A ER I GD L+++V+ +GI + L+KD
Sbjct: 235 AVERHIEVGDGLQVMVITTEGIQEVHHPLKKD 266
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S +SI +RD K KL DK V+ SGF D L K++ R + NK M A+
Sbjct: 56 LSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIETRL-----KMNKAMRTGAV 110
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS +RFFPYY +N++GGLD EGKG VY++D VGSY+R + S S + P
Sbjct: 111 AAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSVKAGASASATLQPL 170
Query: 121 LDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L NQ +V P A+ LVK F SA ERD+YTGD L I ++ K+G
Sbjct: 171 LHNQTG------FRRMQSVEHVPRILDRAMRLVKDVFISAAERDVYTGDALRICIVTKEG 224
Query: 179 IHREYMELRKD 189
I E + LRKD
Sbjct: 225 IREETVPLRKD 235
>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
Length = 258
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 110/186 (59%), Gaps = 6/186 (3%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
++L+RD KI L D V++ +GF DV L++LL AR Y+ + M+ +LLS
Sbjct: 77 NVLTRDAEKIHVLNDSIVLSCAGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLS 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G E +GY++ GS +IMPF D Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPIGCIEHIGYTASGSAEPMIMPFFDCQI 196
Query: 126 KSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGIHREY 183
L+ + D P L+ A L+K F A ER+I TGDK+ +V++ I + +
Sbjct: 197 G----LVTVSGDVEKPHLTIERATSLIKDAFRVAAEREISTGDKIHLVIVEAGKPIRKMH 252
Query: 184 MELRKD 189
+ LR+D
Sbjct: 253 LPLRED 258
>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
Length = 266
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 33/212 (15%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ + V++ GF AD +AL++ L A +Y+++H K
Sbjct: 63 SGYNINTRYAPKLFKIGEGDEGGEGAHLVLSVVGFAADGRALKERLDAIVKMYKYKHGKP 122
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q L+ LY KRFFPYY +L G+D +GKG +Y+YD VGSYER + G+ +
Sbjct: 123 MSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAA 182
Query: 115 TLIMPFLDNQL-----------------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 157
+LIMPFLDNQ+ K P P P +D A+ LV F S
Sbjct: 183 SLIMPFLDNQVNFKNQYLPGSGEGNAMDKQPRPSEPPPRDV--------ALQLVNDAFTS 234
Query: 158 ATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
A ER I GD L+++V+ ++GI Y L+KD
Sbjct: 235 AVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
Length = 266
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 33/212 (15%)
Query: 3 TGYSILSRDYSKIIKLAD--------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ 54
+GY+I +R K+ K+ + V++ GF AD +AL++ L A +Y+++H K
Sbjct: 63 SGYNINTRYAPKLFKIGEGDEGGEGAHLVLSVVGFAADGRALKERLDAIVKMYKYKHGKP 122
Query: 55 MSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
MS A Q L+ LY KRFFPYY +L G+D +GKG +Y+YD VGSYER + G+ +
Sbjct: 123 MSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGKGALYSYDPVGSYEREYCRAAGAAA 182
Query: 115 TLIMPFLDNQL-----------------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFAS 157
+LIMPFLDNQ+ K P P P +D A+ LV F S
Sbjct: 183 SLIMPFLDNQVNFKNQYLPGSGEGNAMDKQPRPSEPPPRDV--------ALQLVNDAFTS 234
Query: 158 ATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
A ER I GD L+++V+ ++GI Y L+KD
Sbjct: 235 AVERHIEVGDGLQVMVITREGIQEIYHPLKKD 266
>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
Length = 253
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+IL+RD KI L + ++A SGF DV L++LL AR Y+ + M+ +LL+
Sbjct: 72 NILTRDAEKIHVLNNSIILACSGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLA 131
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ ++L G+D +GKG V++YD +G ER+ Y++ GS +IMPFLD Q+
Sbjct: 132 RNLYYRRFFPYYTGSILAGIDEDGKGAVFSYDPIGCIERLQYTASGSAEPMIMPFLDCQV 191
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGIHREYM 184
+ L PL+ A L+K F + ER+I TGDK+ +V+ + I + ++
Sbjct: 192 GH---VTLTGDVEKPPLTIERATSLMKDAFRVSAEREICTGDKIHLVIAERGKPIRQMHL 248
Query: 185 ELRKD 189
LR+D
Sbjct: 249 PLRED 253
>gi|167538768|ref|XP_001751043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770452|gb|EDQ84148.1| predicted protein [Monosiga brevicollis MX1]
Length = 120
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 83/122 (68%), Gaps = 3/122 (2%)
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 127
LY KRFFPYY+ N+L GLD EGKGCVY+YD VGSYER + + G+ S+L+ P LDNQ+
Sbjct: 2 LYRKRFFPYYTNNILAGLDAEGKGCVYSYDPVGSYEREVFRAAGTASSLLQPLLDNQIGG 61
Query: 128 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELR 187
+ L QD PL + AV LVK F +A ERDIYTGD + I ++ KDG+ E M LR
Sbjct: 62 KN---LANQDGPLPLDKERAVRLVKDIFVAAAERDIYTGDAVHIAIITKDGVTHEEMPLR 118
Query: 188 KD 189
+D
Sbjct: 119 RD 120
>gi|429856646|gb|ELA31546.1| proteasome component c5 [Colletotrichum gloeosporioides Nara gc5]
Length = 264
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 115/203 (56%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKLA-------DKCVMASS-GFQADVKALQKLLAARHLIYQHQHNK 53
++GYSI SR K+ K+ D ++ S GF AD +AL+ L IY+++H K
Sbjct: 62 TSGYSINSRYTPKVFKIGGTTSSQEDATILLSVVGFAADGEALKDRLDTICKIYRYRHGK 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
MS A + LS LY KRFFPYY + +LGGLD +G G V++YD VGSYER + G+
Sbjct: 122 PMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEDGVGAVFSYDPVGSYEREQSRAGGAA 181
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LI PFLDNQ+ + + + + PL EA LVK F A ER I G
Sbjct: 182 ASLITPFLDNQVNFKNQYVPGSGVGHELQERPRVPLERKEAEILVKDAFDGAVERHIEVG 241
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++++ K+G+ + L+KD
Sbjct: 242 DHLQMMIITKNGVEEVLLPLKKD 264
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 106/177 (59%), Gaps = 6/177 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+SI SR +K+ +L +K +A++GF AD K L K + R Y++ HNK+M ++
Sbjct: 31 SEGFSIQSRYETKVWRLNEKATIAANGFAADCKQLVKRVKWRLETYKYAHNKEMPLKSIA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY KRFFP+YS+ ++GG+D+EG G VY +D VGSYER + G+ +L+ PFL
Sbjct: 91 RMVQTMLYGKRFFPFYSYVIIGGIDDEGTGAVYGFDPVGSYERETCRAAGAAQSLLQPFL 150
Query: 122 DNQL----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + P+ P PL A+ V F ATER I GD LE+ V+
Sbjct: 151 DNQIYFRNQEPADPANPPIPGNLPLETVLAI--VTDSFTGATERHIEVGDALEMYVV 205
>gi|328849593|gb|EGF98770.1| hypothetical protein MELLADRAFT_73512 [Melampsora larici-populina
98AG31]
Length = 239
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 111/207 (53%), Gaps = 21/207 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI SR K+ +L D+C +A +GF AD K L K + R + Y H H+ S ++
Sbjct: 35 SEGYSIQSRYAPKVTQLTDQCCIAVNGFAADAKELVKQIKQRLVWYNHTHSSMPSLQSIA 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY++ +L G+D +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 95 RLIQTMLYGRRFFPYYAYVILAGIDRDGTGAVYSFDPVGSYERESCRAAGAAQSLVQPFL 154
Query: 122 DNQ------LKSPSPLLLPAQD------------AVTPLSEAEAVDLVKTCFASATERDI 163
DNQ ++ P+ P + A PL EA LV F ATER I
Sbjct: 155 DNQVGGKNMIRDPNGPPAPVEPVYGKGESYTPPRADLPLERVEA--LVTDAFTGATERHI 212
Query: 164 YTGDKLEIVVLN-KDGIHREYMELRKD 189
GD LEI V+ G+ L++D
Sbjct: 213 EVGDGLEIFVIEVGKGVRVIQKPLKRD 239
>gi|358054309|dbj|GAA99235.1| hypothetical protein E5Q_05929 [Mixia osmundae IAM 14324]
Length = 250
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 99/178 (55%), Gaps = 5/178 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI SR ++ L D+ VMA+ GF AD L K L R Y H H K A+
Sbjct: 49 SEGYSIQSRYQPRVFALTDETVMATQGFMADSNTLVKKLRQRLEWYFHTHQKYPDLTAIA 108
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY KRFFPYYS+ +LGG+D +G G VY++D VGSYER S G+ +L+ PFL
Sbjct: 109 RLVQTMLYGKRFFPYYSYVILGGIDRDGTGAVYSFDPVGSYERESCRSAGAAQSLVQPFL 168
Query: 122 DNQLKS-----PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ P + ++ + L + LV F ATER I GD LE+ VL
Sbjct: 169 DNQVMGKNQNLPKGESILDEEGRSNLPLERVLGLVVDSFTGATERHIEVGDGLEMYVL 226
>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
Length = 265
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 15/203 (7%)
Query: 2 STGYSILSRDYSKIIKL----AD----KCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
+ GYSI SR K+ K+ AD + V++ GF AD +AL++ L +Y+++H K
Sbjct: 63 TAGYSINSRFSPKVFKIGGSTADQHDARIVLSVVGFAADGEALKERLDTICKMYRYRHGK 122
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+S A + LS LY KRFFPYY+ +LGGLD +G G +Y+YD VGSYER + G+
Sbjct: 123 PISVNACAKRLSTILYQKRFFPYYTHAILGGLDEDGIGAIYSYDPVGSYEREQSRAGGAA 182
Query: 114 STLIMPFLDNQLKSPSPLLLPA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
++LI PFLDNQ+ + + + + PL + +LVK F A ER I G
Sbjct: 183 ASLITPFLDNQVNFKNQYVPGSGIGHDLMERPRVPLPRNDVEELVKDAFDGAVERHIEVG 242
Query: 167 DKLEIVVLNKDGIHREYMELRKD 189
D L+++V+ KDGI + L+KD
Sbjct: 243 DYLQMLVVTKDGIEEVVLPLKKD 265
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAMGQLLSNTLY 69
D SK+ +L D+ +ASSG QAD LQ++L R Y++ + K S A+ +L+S LY
Sbjct: 83 DTSKLFQLTDRVFLASSGMQADRLQLQRMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLY 142
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ GLD +G G Y+YDAVGS E Y + GS S+ + P +D
Sbjct: 143 QRRFFPYYTFNMIVGLDEQGAGVCYSYDAVGSTEPSRYGTCGSASSFVEPLMD------- 195
Query: 130 PLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
LL Q VT LS E + ++K F A ERDI+TGD + V+ +GI E E
Sbjct: 196 -CLLTRQHMVTSVPPELSVEEVLGMMKDAFTGAAERDIFTGDSVCFHVITAEGIRTEMFE 254
Query: 186 LRKD 189
LRKD
Sbjct: 255 LRKD 258
>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 258
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 4/179 (2%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+SI +R K +L D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 48 TEGFSIQTRYAPKAFQLTDRAVLAVNGFAADGNMFVKQVKQRLEWYRHAHAKDMPLRAIA 107
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 108 RLIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFL 167
Query: 122 DNQLKSPSPLLLPAQDAVTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
DNQ+ + PAQ P L + +D+V F SATER I GD LE+ ++ G
Sbjct: 168 DNQIYFKN--QTPAQGLSHPTHLPLPDVLDIVIDSFTSATERHIEVGDGLEMFIVLAKG 224
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLY 69
D SK+ KL D+ +ASSG QAD LQ++L R YQ+ + ++ S A+ +L S LY
Sbjct: 83 DTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLY 142
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ G+D +G G Y+YD VGS E Y + GS S+ + P LD
Sbjct: 143 QRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD------- 195
Query: 130 PLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
LL Q VT L+ EA+ ++K F A ERDI+TGD + ++ DG+ E E
Sbjct: 196 -CLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFHIITADGVGTEMFE 254
Query: 186 LRKD 189
LRKD
Sbjct: 255 LRKD 258
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 107/184 (58%), Gaps = 13/184 (7%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLY 69
D SK+ KL D+ +ASSG QAD LQ++L R YQ+ + ++ S A+ +L S LY
Sbjct: 83 DTSKLFKLTDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLY 142
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ G+D +G G Y+YD VGS E Y + GS S+ + P LD
Sbjct: 143 QRRFFPYYTFNMIVGIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD------- 195
Query: 130 PLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
LL Q VT L+ EA+ ++K F A ERDI+TGD + ++ DG+ E E
Sbjct: 196 -CLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFHIVTADGVGTEMFE 254
Query: 186 LRKD 189
LRKD
Sbjct: 255 LRKD 258
>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
Length = 258
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 4/185 (2%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+IL+RD KI L D ++ +SGF DV L+K+L +R Y+ + MS +LLS
Sbjct: 77 NILTRDAEKIHVLNDSIILTTSGFYGDVIQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G ER+GYS+ G+ +I+PFLD Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI 196
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IHREYM 184
+ L L+ A+ L+K F A ER+I TGDK+ +V+ + ++++
Sbjct: 197 ---GHVTLAEGYERPQLTLERAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVQKFL 253
Query: 185 ELRKD 189
LR+D
Sbjct: 254 PLRED 258
>gi|393212888|gb|EJC98386.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 266
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y+I +R K+ +L DK V+A +GF AD K + R Y+H H K M A+ +L+
Sbjct: 55 YNIQTRYAPKVFRLTDKAVLAVNGFAADGNMFIKKVKQRLEWYRHAHAKDMPLRAVARLI 114
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ L+ PFLDNQ
Sbjct: 115 QTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQQLVQPFLDNQ 174
Query: 125 L--KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 176
+ K+ P L T L + LV F SATER I GD LE+ VVL K
Sbjct: 175 IYFKNQQPPLGTVGGHPTHLPLERVLSLVVDSFTSATERHIEVGDGLEMYVVLAK 229
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ KL DK V+A +GF AD K + R Y+H H K M ++
Sbjct: 42 SEGYNIQTRYAPKVFKLTDKAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPIRSIA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 102 RLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYERETCRAAGAAQSLVQPFL 161
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKD 177
DNQ+ + P L + LV F ATER I GD LE+ VVL+++
Sbjct: 162 DNQIYFKNQTPAPGTSFPQHLPLQTVLALVIDSFTGATERHIEVGDGLEMYVVLSQN 218
>gi|449295464|gb|EMC91486.1| hypothetical protein BAUCODRAFT_117991 [Baudoinia compniacensis
UAMH 10762]
Length = 265
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 2 STGYSILSRDYSKIIKLA--------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNK 53
++GY+I +R K+ + K V++ GF AD +ALQ+ L +Y++QH
Sbjct: 62 TSGYNINTRYAPKLYPIGGQGPTHKGSKIVLSVVGFAADGRALQERLDTVVKMYRYQHGC 121
Query: 54 QMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERVGYSSQGS 112
++S A Q LS+ LY KRFFPYY +LGG+D E G+G +Y+YD VGSYER + G+
Sbjct: 122 EISVKACAQRLSHILYNKRFFPYYVQAILGGIDEETGEGALYSYDPVGSYEREYCRAAGA 181
Query: 113 GSTLIMPFLDNQLK-----SPSPL--LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 165
++LIMPFLDNQ+ P+ + Q PL + +LV+ F SA ER I
Sbjct: 182 AASLIMPFLDNQVNLKNQYEPAAVSGFDKKQLVPQPLERPQVEELVRDAFTSAVERHIEV 241
Query: 166 GDKLEIVVLNKDGIHREYMELRKD 189
GD L+++ + K+GI Y L+KD
Sbjct: 242 GDGLQMMFITKEGIEEVYFPLKKD 265
>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 14/178 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GYSI +R K+ +L DK V+A +GF AD K + R Y+H H+K M ++
Sbjct: 34 TEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMFVKKVKQRLEWYRHAHSKDMPLQSIA 93
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+++ LY KRFFPYY +N+LGG+D +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 94 RMIQTMLYAKRFFPYYVYNILGGIDEQGVGAVYSFDPVGSYERETCRAAGAAQSLVQPFL 153
Query: 122 DNQL-----KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
DNQ+ + P LP ++ LV F ATER I GD L++ V+
Sbjct: 154 DNQIYFKNQQGDHPAHLPLDHVLS---------LVTDAFTGATERHIEVGDGLQMFVI 202
>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
Length = 258
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 6/186 (3%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
++L+RD KI L D V++ +GF D+ L++LL AR Y+ + M+ +LLS
Sbjct: 77 NVLTRDAEKIHVLNDSIVLSCAGFYGDILQLKRLLEARLHKYRFDYRGDMTVDLCAELLS 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G E + Y++ GS +IMPF D Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQI 196
Query: 126 KSPSPLLLPAQDAVTPLSEAE-AVDLVKTCFASATERDIYTGDKLEIVVLNK-DGIHREY 183
L+ + D PL E A L+K F A ER+I TGDK+ +V+ I + +
Sbjct: 197 G----LVTMSGDVEKPLLTIERATSLIKDAFRVAAEREISTGDKIHLVIAEAGKPIRKMH 252
Query: 184 MELRKD 189
+ LR+D
Sbjct: 253 LPLRED 258
>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLY 69
D +K+ +L + +AS+G QAD LQ++L R YQ+ + ++ S A+ +L S LY
Sbjct: 71 DRTKLFQLTEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLY 130
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ GLD +G G Y+YD VGS E Y + GS S+ + P +D L
Sbjct: 131 QRRFFPYYTFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQH 190
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+ Q A LS E ++++K F A ERDI+TGD + ++ DGI E ELRKD
Sbjct: 191 MV----QQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLY 69
D +K+ +L + +AS+G QAD LQ++L R YQ+ + ++ S A+ +L S LY
Sbjct: 71 DRTKLFQLTEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLY 130
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ GLD +G G Y+YD VGS E Y + GS S+ + P +D L
Sbjct: 131 QRRFFPYYTFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQH 190
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+ Q A LS E ++++K F A ERDI+TGD + ++ DGI E ELRKD
Sbjct: 191 MV----QQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|402585903|gb|EJW79842.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 258
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 6/186 (3%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+IL+RD KI L D V++ +GF D+ L++LL AR Y+ + M+ +LLS
Sbjct: 77 NILTRDAEKIHVLNDSIVLSCAGFYGDILQLKRLLEARLHKYRFDYRGDMTVDLCAELLS 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G E + Y++ GS +IMPF D Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQI 196
Query: 126 KSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGIHREY 183
L+ + D P L+ A L+K F A ER+I TGDK+ +V+ I + +
Sbjct: 197 G----LVTMSGDVEKPHLTVERATSLIKDAFRVAAEREISTGDKIHLVIAEAGKPIRKMH 252
Query: 184 MELRKD 189
+ LR+D
Sbjct: 253 LPLRED 258
>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 246
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLY 69
D +K+ +L + +AS+G QAD LQ++L R YQ+ + ++ S A+ +L S LY
Sbjct: 71 DRTKLFQLTEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLY 130
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ GLD +G G Y+YD VGS E Y + GS S+ + P +D L
Sbjct: 131 QRRFFPYYTFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQH 190
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+ Q A LS E ++++K F A ERDI+TGD + ++ DGI E ELRKD
Sbjct: 191 MV----QQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246
>gi|17554384|ref|NP_498806.1| Protein PBS-6 [Caenorhabditis elegans]
gi|21903455|sp|P34286.2|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome subunit beta 6
gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
gi|351020646|emb|CCD62635.1| Protein PBS-6 [Caenorhabditis elegans]
Length = 258
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+IL+RD KI L D ++ +SGF DV L+K+L +R Y+ + MS +LLS
Sbjct: 77 NILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLS 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G ER+GYS+ G+ +I+PFLD Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI 196
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IHREYM 184
+ L L+ A+ L+K F A ER+I TGDK+ +V+ + +++
Sbjct: 197 ---GHVTLSEGYERPELTLDRAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVVKFL 253
Query: 185 ELRKD 189
LR+D
Sbjct: 254 PLRED 258
>gi|341897234|gb|EGT53169.1| CBN-PBS-6 protein [Caenorhabditis brenneri]
Length = 258
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+IL+RD KI L D V+ +SGF DV L+K+L +R Y+ + MS +LL+
Sbjct: 77 NILTRDAEKIHVLNDSIVLTTSGFYGDVIQLKKVLQSRLHKYRFDYRADMSVDLCAELLA 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G ER+ YS+ G+ +I+PFLD Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPIGCIERIAYSASGAAEPMIIPFLDCQI 196
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IHREYM 184
+ L L+ A+ L+K F A ER+I TGDK+ +V+ + ++++
Sbjct: 197 GH---VTLSEGYERPELTLERAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVQKFL 253
Query: 185 ELRKD 189
LR+D
Sbjct: 254 PLRED 258
>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi]
Length = 246
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMGQLLSNTLY 69
D +K+ +L + +AS+G QAD LQ++L R YQ+ + ++ S A+ +L S LY
Sbjct: 71 DRTKLFQLTEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLY 130
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+RFFPYY+FN++ GLD +G G Y+YD VGS E Y + GS S+ + P +D L
Sbjct: 131 QRRFFPYYTFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQH 190
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+ Q A LS E ++++K F A ERDI+TGD + ++ DGI E ELR D
Sbjct: 191 MV----QQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRND 246
>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
Length = 258
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 6/186 (3%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+IL+RD KI L D ++ +SGF DV L+K+L +R Y+ + MS +LLS
Sbjct: 77 NILTRDAEKIHVLNDSIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRADMSVDLCAELLS 136
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LYY+RFFPYY+ +L G+D GKG V++YD +G ER+ YS+ G+ +I+PFLD Q+
Sbjct: 137 RNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPIGCIERLTYSASGAAEPMIIPFLDCQI 196
Query: 126 KSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IHREY 183
+ A+ P L+ A+ L+K F A ER+I TGDK+ +V+ + +++
Sbjct: 197 GH----VTLAEGYERPQLTLERAISLMKDSFRGAAEREISTGDKIHLVIAETGKPVVQKF 252
Query: 184 MELRKD 189
+ LR+D
Sbjct: 253 LPLRED 258
>gi|403171610|ref|XP_003330811.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169259|gb|EFP86392.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 255
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 109/205 (53%), Gaps = 17/205 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L ++C +A +GF AD K L K L R YQH H Q S ++
Sbjct: 51 SEGYSIQTRYAPKVTQLTEECCIAVNGFAADGKELVKQLKQRLQWYQHTHASQPSVQSIA 110
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY++ +L G+D +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 111 RLVQTMLYGRRFFPYYAYVILAGIDRDGTGAVYSFDPVGSYERESCRAAGAAQSLVQPFL 170
Query: 122 DNQLKSPS-------------PLLLPAQDAVTPLSE---AEAVDLVKTCFASATERDIYT 165
DNQ+ + P+ Q P S+ + LV F A ER I
Sbjct: 171 DNQVGGKNMTRDPSGPAPPPEPVYAQGQSYTPPRSQLPLEKVQALVTDAFTGAAERHIEV 230
Query: 166 GDKLEIVVLNK-DGIHREYMELRKD 189
GD LEI ++ G+ EL++D
Sbjct: 231 GDGLEIFIIEAGKGVRVVRKELKRD 255
>gi|336272341|ref|XP_003350927.1| hypothetical protein SMAC_04232 [Sordaria macrospora k-hell]
gi|380090694|emb|CCC04864.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 151
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 93/151 (61%), Gaps = 7/151 (4%)
Query: 46 IYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 105
+Y+++H K MS A Q LS LY KRFFPYY + +LGGLD EGKG VY+YD VGSYER
Sbjct: 1 MYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYERE 60
Query: 106 GYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA--QDAVTPLSEAEAVDLVKTCFASA 158
+ G+ ++LIMPFLDNQ+ P + A + PL+ +E LVK F A
Sbjct: 61 QCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQERERKPLTRSEGEILVKDAFDGA 120
Query: 159 TERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
ER I GD L+++V+ +DGI + L+KD
Sbjct: 121 VERHIEVGDGLQMMVITRDGIEEVLLPLKKD 151
>gi|37778970|gb|AAP20145.1| 20S proteasome beta 6 subunit [Pagrus major]
Length = 135
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 8/133 (6%)
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
A+ +LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R Y + GS S ++
Sbjct: 9 AIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQ 68
Query: 119 PFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
P LDNQ+ + V PL++ +AV LVK F SA ERD+YTGD L + V+ K
Sbjct: 69 PLLDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCVITK 122
Query: 177 DGIHREYMELRKD 189
+GI+ + + LRKD
Sbjct: 123 EGINEQTIPLRKD 135
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 83/123 (67%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 62 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 121
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R + + GS S ++ P
Sbjct: 122 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 181
Query: 121 LDN 123
LDN
Sbjct: 182 LDN 184
>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ ILSR+ ++ KL V+ +GF DV L KLL + Y++ H K +S A+ LL
Sbjct: 34 FVILSRNCPRLFKLGRGNVLGCAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLL 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S +LY +RFFP+Y N+L GLD + +G +Y+YD VGSYE GY + GS + ++ PFLD+
Sbjct: 94 SVSLYNRRFFPFYVSNILVGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDST 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + + ++ V+ L++ AV L F SA ERD GD + I + KDG+
Sbjct: 153 VGNKT-----SKYHVSRLNKETAVKLTHDIFISAAERDTQCGDGVVIYTVTKDGLSETSY 207
Query: 185 ELRKD 189
LR+D
Sbjct: 208 PLRRD 212
>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ ILSR+ ++ KL V+ +GF DV L KLL + Y++ H K +S A+ LL
Sbjct: 34 FVILSRNCPRLFKLGRGNVLGCAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLL 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S +LY +RFFP+Y N+L GLD + +G +Y+YD VGSYE GY + GS + ++ PFLD+
Sbjct: 94 SVSLYNRRFFPFYVSNILVGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDST 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + + ++ V+ L++ AV L F SA ERD GD + I + KDG+
Sbjct: 153 VGNKT-----SKYHVSRLNKETAVKLTHDIFISAAERDTQCGDGVVIYTVTKDGLSETSY 207
Query: 185 ELRKD 189
LR+D
Sbjct: 208 PLRRD 212
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ ILSR+ ++ KL V+ +GF DV L KLL + Y++ H K +S A+ LL
Sbjct: 34 FVILSRNCPRLFKLGRGNVLGYAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLL 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S +LY +RFFP+Y N+L GLD + +G +Y+YD VGSYE GY + GS + ++ PFLD+
Sbjct: 94 SVSLYNRRFFPFYVSNILVGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDST 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + + ++ V+ L++ AV L F SA ERD GD + I + KDG+
Sbjct: 153 VGNKT-----SKYHVSRLNKETAVKLTHDIFISAAERDTQCGDGVVIYTVTKDGLSETSY 207
Query: 185 ELRKD 189
LR+D
Sbjct: 208 PLRRD 212
>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
Length = 224
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+G +ILSR +K+ L+ + V+A++G D +L LL + Y++QH+K MS +M
Sbjct: 34 LSSGCAILSRTQTKLCPLSKQMVVAATGCWCDAVSLTNLLKVKQQGYENQHHKVMSIESM 93
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS Y +R PY +LGG+D +G+G V++YD +G + R +G+ ++ P
Sbjct: 94 AQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSYDCIGHFVRESSRVEGTAVGILQPV 153
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ LL L++ A+ + K F +A + D++TGD + I V+ KD I
Sbjct: 154 LDNQIGYTKKDLLDETSEQPALTKERALAIAKDAFITAAQSDVFTGDSVIINVITKDSIK 213
Query: 181 REYMELRKD 189
E M+L KD
Sbjct: 214 VEKMQLGKD 222
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 20/199 (10%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQ 62
GY+I +R ++ ++ D V+ +SGF+AD AL K + R +Y H ++MS +
Sbjct: 35 NGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCAC 94
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
++ LY KRFFPYY + + G+D EGKG +Y++D VGSYER + GS + I PFLD
Sbjct: 95 MVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLD 154
Query: 123 NQL------------KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 170
NQ+ K P L L EA+ + F SA ER I GD +
Sbjct: 155 NQVNLHNQYVPGSHGKERKPRRL--------LKLEEAMKITTDAFTSAGERHIEVGDSVL 206
Query: 171 IVVLNKDGIHREYMELRKD 189
+ ++ K+G+ + L+KD
Sbjct: 207 VKIITKEGVETRIIPLKKD 225
>gi|190408868|gb|EDV12133.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
Length = 242
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 10/195 (5%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQAD----VKALQKLLAARHLIYQHQHNKQMSCP 58
T YSI SR K+ D VM+++GF AD VK + + H Q Q C
Sbjct: 50 TDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFGPQRQKIIYKLCS 109
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
S T + FFPYY ++ GLD +GKG VY++D VGSYER + G+ ++LIM
Sbjct: 110 KEYSTSSGTG--RGFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIM 167
Query: 119 PFLDNQLKSPSPLLLPAQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
PFLDNQ+ + V LS E + LV+ F SATER I GD LEI+++
Sbjct: 168 PFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIV 227
Query: 175 NKDGIHREYMELRKD 189
KDG+ +E+ EL++D
Sbjct: 228 TKDGVRKEFYELKRD 242
>gi|255965748|gb|ACU45169.1| proteasome subunit beta type 1 [Prorocentrum minimum]
Length = 123
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 7/129 (5%)
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
QLLS LY KRFFPYY+FNVL G+D+EGKG VY YDA+GS+ERV Y++ GSGS+L+M L
Sbjct: 1 QLLSTMLYGKRFFPYYTFNVLVGIDDEGKGAVYHYDAIGSFERVPYTTSGSGSSLVMSVL 60
Query: 122 DNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
D Q++ + Q TP L++ + VDL +S ERDI+TGD EI V++ G+H
Sbjct: 61 DAQIQKGN------QTIETPVLTKDKIVDLSMDVLSSVGERDIHTGDAGEIFVIDAAGVH 114
Query: 181 REYMELRKD 189
+ EL+ D
Sbjct: 115 KTKFELKLD 123
>gi|296413676|ref|XP_002836535.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630362|emb|CAZ80726.1| unnamed protein product [Tuber melanosporum]
Length = 257
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 116/197 (58%), Gaps = 9/197 (4%)
Query: 2 STGYSILSRDYSKIIKLAD--KCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCP 58
++GY+I SR K+ +L + V+A+ GF AD K + + + ++ HN K MS
Sbjct: 61 TSGYNINSRTEKKVYRLGEDNSLVLATVGFGADSKDVAETMMRAVNDFKFNHNLKNMSVS 120
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG--YSSQGSGSTL 116
A Q LS LY RFFP Y+ VL GLD +G+ +Y+YD+VGSY + G +S GS S+L
Sbjct: 121 AAAQYLSTFLYGNRFFPKYANCVLAGLDKDGRARLYSYDSVGSYSKQGESRASAGSASSL 180
Query: 117 IMPFLDNQLKSPSPLLLPA----QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 172
I+PFLDNQ++ + + + + V PL LVK F SATER I GD L+I+
Sbjct: 181 IVPFLDNQVEFKNQFVPSSKGQEERPVVPLDPVTVAKLVKDAFTSATERHIEVGDGLQII 240
Query: 173 VLNKDGIHREYMELRKD 189
+ KDG+ E ++L+KD
Sbjct: 241 TVTKDGVSEEVVDLKKD 257
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 8/189 (4%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S+G +ILSR +K+ L+ + V+A++G D +L LL + Y++QH+K MS +M
Sbjct: 34 LSSGCAILSRTQTKLCPLSKQMVVAATGCGCDAVSLTNLLKVKQQGYENQHHKVMSIESM 93
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+LS Y +R PY +LGG+D +G+G V++YD +G + R +G+ ++ P
Sbjct: 94 AQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSYDCIGHFVRESSRVEGTAVGILQPV 153
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LDNQ+ S PA L++ A+ + K F +A + D++TGD + I V+ KD I
Sbjct: 154 LDNQIGETSE--QPA------LTKERALAIAKDAFITAAQSDMFTGDSVIINVITKDSIK 205
Query: 181 REYMELRKD 189
E M+L KD
Sbjct: 206 VEKMQLGKD 214
>gi|444728635|gb|ELW69084.1| Proteasome subunit beta type-1 [Tupaia chinensis]
Length = 283
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 113/241 (46%), Gaps = 66/241 (27%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+S+ +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAV 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFF KG VY++D VGSY+R + + GS S ++ P
Sbjct: 117 AAMLSTILYSRRFF--------------XKGAVYSFDPVGSYQRDSFKAGGSASAMLQPL 162
Query: 121 LDNQLKSP----SPLLLPAQD------------------------AVTP----------- 141
LDNQL S PLLL ++TP
Sbjct: 163 LDNQLNSDLHFGLPLLLTRPGLTSLICPVCFHMHITWSSSLLCLISITPPFTLPLLLSEL 222
Query: 142 -------------LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRK 188
LS A+ LVK F SA ERD+YTGD L I ++ K+G+ E + LR+
Sbjct: 223 VGFKNMQNVEHIPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGVREETVPLRR 282
Query: 189 D 189
D
Sbjct: 283 D 283
>gi|390602798|gb|EIN12190.1| proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 276
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 99/196 (50%), Gaps = 19/196 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ KL D+ V+A +GF AD K + R Y+H H K M A+
Sbjct: 47 SEGYNIQTRYAPKVFKLTDRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIA 106
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNE-------------------GKGCVYTYDAVGSY 102
+L+ LY +RFFPYY +N+LGG++ + G G VY++D VGSY
Sbjct: 107 RLIQTMLYARRFFPYYVYNILGGIEEDGTSAHSARPAFSSHFPTRTGSGAVYSFDPVGSY 166
Query: 103 ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 162
ER + G+ L+ PFLDNQ+ + P L + + LV F ATER
Sbjct: 167 ERETCRAAGAAQNLVQPFLDNQIYFKNQQPAPGTSHPKHLPLPDVIKLVIDSFTGATERH 226
Query: 163 IYTGDKLEIVVLNKDG 178
I GD LE+ ++ G
Sbjct: 227 IEVGDGLEMYIVLAKG 242
>gi|405946999|gb|EKC17751.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 128
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 86/135 (63%), Gaps = 15/135 (11%)
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+L+NTLY +RFFPYY++N+L GLD G GCVY+YD VG+YERV + GSG +LI P LD
Sbjct: 1 MLANTLYGRRFFPYYTWNILAGLDENGVGCVYSYDPVGNYERVRVNVTGSGESLIQPLLD 60
Query: 123 NQLK--------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
NQ + P PL + LS A+ ++VK F SA ERDIYTGD +E++V+
Sbjct: 61 NQFERQHQQFAAKPPPLNV-------DLSLADTEEIVKDAFYSAGERDIYTGDTVEVMVI 113
Query: 175 NKDGIHREYMELRKD 189
+G+ E EL D
Sbjct: 114 TGEGVRIETHELNID 128
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ + ++ G AD + L + +A + Y+ H+K ++ A
Sbjct: 55 SEGYSINTRTARKVYDIGSGLILGVVGMSADGEELVRKVARKIDDYKRNHDKHITVAAAA 114
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LS LY KRFFPYY +LGGLD EG G +Y+YD VGS+ER + G+ ++LI PFL
Sbjct: 115 VMLSRILYQKRFFPYYCQPLLGGLDEEGVGAIYSYDYVGSFEREQSRAYGAAASLITPFL 174
Query: 122 DNQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DNQ+ + +P + P LS+ + +VK F SA ER I GD L++V + K
Sbjct: 175 DNQINFKNQ-FVPGSNGEEPRPKVDLSKEQVEKIVKDAFTSAVERHIEVGDGLQLVTIVK 233
>gi|342319050|gb|EGU11002.1| Proteasome subunit beta type [Rhodotorula glutinis ATCC 204091]
Length = 289
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 11/191 (5%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+GY+I +R ++ +L + +A GF D L K L R Y H HN+ S ++
Sbjct: 43 SSGYNIETRTAKRVFQLTPEAAIAVQGFMGDAMNLVKRLKQRLEWYHHTHNEVPSLKSIA 102
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY KRFFPYYS+ +L G+D +G G VY++D VGSYER + GS +L+ PFL
Sbjct: 103 RLVQTMLYGKRFFPYYSYVILAGIDRDGTGAVYSFDPVGSYERESCRAYGSAQSLVQPFL 162
Query: 122 DNQLKSPSPLLLPAQDAVT-----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
DN + + + P+ AE L+ F A ER I GD L+++V+ K
Sbjct: 163 DNMVYKKNQVPDPSLPPPVPGQRPEFDLAEVQSLLTDAFTGAAERHIEVGDGLDVLVVEK 222
Query: 177 DGIHREYMELR 187
D ME+R
Sbjct: 223 D------MEMR 227
>gi|225712140|gb|ACO11916.1| Proteasome subunit beta type-1-A [Lepeophtheirus salmonis]
Length = 238
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 109/189 (57%), Gaps = 7/189 (3%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ ++I SR+ SKI KL + +++GF D+ + ++L + ++ Q K+M +
Sbjct: 56 SSSFTIHSRNCSKIFKLKNSITFSATGFFGDIYRVFEILKHKQELFYQQFEKEMLVSELA 115
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N LY KRFFP+Y F VLGG++N G+ +Y+YD VGSY++ G+G ++ P L
Sbjct: 116 HFLMNVLYSKRFFPFYGFIVLGGIEN-GECAMYSYDPVGSYQKDTARCYGTGMKIVQPIL 174
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IH 180
D+++ + L + + + +VK F S +ERD+ TGD +EIV++ KDG
Sbjct: 175 DSKIYRKNNLKKEEEFKEEEI-----IAIVKKAFESVSERDVKTGDGVEIVIIRKDGSTD 229
Query: 181 REYMELRKD 189
++LR+D
Sbjct: 230 SNIIKLRRD 238
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
Length = 274
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 21/197 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY+I +R K+ +L +K V+A +GF AD K L R Y H H K M A+
Sbjct: 43 SEGYNIQTRYAPKVHRLTNKAVLAVTGFAADGNTFVKKLKQRLEWYHHAHAKNMPLQAVA 102
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNE--------------------GKGCVYTYDAVGS 101
+L+ LY +RFFP+Y + +LGG++ + G G VY++D VGS
Sbjct: 103 RLIQTMLYGRRFFPFYVYIILGGIEEDGTRHRSSRSHTHRPTFFLFPGSGSVYSFDPVGS 162
Query: 102 YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 161
YER + G+ +L+ PFLDNQ+ + + P L + LV F SATER
Sbjct: 163 YERETCRAAGAAQSLLQPFLDNQIYFKNQIPQPGTTHPAHLPLPHVLSLVIDSFTSATER 222
Query: 162 DIYTGDKLEI-VVLNKD 177
I GD LE+ +V+ KD
Sbjct: 223 HIEVGDGLEVYIVVAKD 239
>gi|67526071|ref|XP_661097.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|40739864|gb|EAA59054.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|259481995|tpe|CBF76042.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 215
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 15/192 (7%)
Query: 2 STGYSILSRDYSKIIKLAD----KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 57
+ GY+I +R K+ + D V++ GF AD +AL++ L A +Y++QH K +
Sbjct: 35 TAGYNINTRYEPKVFTIQDARDRSIVISVIGFAADGRALKERLDAIVAMYKYQHGKNIGL 94
Query: 58 PAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLI 117
A Q +S LY KRFFPY ++ G+D +G+G +Y YD G E+ + + G S+L+
Sbjct: 95 RACAQRVSTMLYEKRFFPYQLQTMVAGIDADGQGAIYYYDPAGCIEKRSHCAAGEASSLM 154
Query: 118 MPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
+PFLD+Q +P L PLS A LV+ + ATER I GD L+++V+ ++
Sbjct: 155 LPFLDSQ----APRL-------QPLSLQTAQQLVRDAYTGATERHIEVGDHLQMLVVTRE 203
Query: 178 GIHREYMELRKD 189
G+ + ++L+KD
Sbjct: 204 GVSEQLVDLKKD 215
>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 261
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D+ V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 19 LSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 78
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG VY+ + +GSY + Y + G+ +T++ P
Sbjct: 79 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGSYLKDNYKAGGTTNTMLQPL 138
Query: 121 LDN 123
N
Sbjct: 139 TAN 141
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GYSI +R K+ +L DK V+A +GF AD K + R Y+H H K M A+
Sbjct: 43 SEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPLRAIA 102
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ LY +RFFPYY +N+LGG++ +G G VY++D VGSYER + G+ +L+ PFL
Sbjct: 103 RLIQTMLYARRFFPYYVYNILGGIEEDGSGAVYSFDPVGSYERESCRAAGAAQSLVQPFL 162
Query: 122 DNQ 124
DNQ
Sbjct: 163 DNQ 165
>gi|402466187|gb|EJW01728.1| hypothetical protein EDEG_03753 [Edhazardia aedis USNM 41457]
Length = 225
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 8/190 (4%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ I +R+ SKI L D + +GF AD + L + + Y+ ++NK+M +
Sbjct: 42 SSEMGINTRNISKIYFL-DDLYLIVTGFYADGYEVYINLLYQLIEYESKNNKKMGIRSAA 100
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LL N LY KRFFPYYS+ +LGG D + K ++++D VGSY GSG+T+I P
Sbjct: 101 HLLHNLLYRKRFFPYYSYCILGGFDKKSQKFLLFSFDVVGSYGETVCRVDGSGTTMIQPL 160
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEA-EAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
LD+++ L ++ T +++ E +LVK F SA ERD+ TGD L++VV+ KDGI
Sbjct: 161 LDSRISK-----LNWENNDTKVTDCKEVCELVKIAFKSAAERDVKTGDYLDLVVVKKDGI 215
Query: 180 HREYMELRKD 189
R +LR D
Sbjct: 216 ERTLHKLRHD 225
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+I+SR SK+ +L + S G AD A+ ++ +YQ H K++S A+ Q+LS
Sbjct: 56 AIVSRSQSKLFQLTPMTAIGSVGCFADTLAVVNVIKQNIHMYQLTHLKRISTDALAQMLS 115
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
++Y RFFPY+ N++ G+D GKG V++YD +G +ER Y + G+G L++P +D +
Sbjct: 116 ISMYSHRFFPYFVSNIVAGIDRNGKGAVFSYDPIGHHERKAYDAAGTGFELMIPAMDYFI 175
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
K+ PL+ A ++ + A +D+YTGD + ++ K+G+ + M
Sbjct: 176 KNLK----------EPLTIEIAAEITRKVMIVADNKDVYTGDSAIMYIITKNGVEAKKMP 225
Query: 186 LRKD 189
LRKD
Sbjct: 226 LRKD 229
>gi|387592573|gb|EIJ87597.1| hypothetical protein NEQG_02144 [Nematocida parisii ERTm3]
gi|387595200|gb|EIJ92825.1| hypothetical protein NEPG_02224 [Nematocida parisii ERTm1]
Length = 242
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S Y+I +R +K L + +++++GF AD + + LA + YQ ++NK+M
Sbjct: 57 SAPYNINTRHATKSFCLDGRFILSTTGFYADSRFVYTELAYQIDKYQFKYNKKMGIEQAA 116
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL LY RFFP +++ L G + E K +++YD VGSY+ GSG+T++ P L
Sbjct: 117 ALLHVLLYKHRFFPKFTYCCLVGFNEEEKPKIFSYDPVGSYQETPCRCNGSGTTMLQPML 176
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+ + + +D V +E E + LVK F S E D+ TGD LE+ V+ KDGI R
Sbjct: 177 DSWITRKNWHCEEGKDYV--CTEEEVISLVKDVFNSVAETDVKTGDGLEVYVIKKDGITR 234
Query: 182 EYMELRKD 189
E LR D
Sbjct: 235 EEYPLRSD 242
>gi|340507845|gb|EGR33723.1| proteasome subunit beta type 1, putative [Ichthyophthirius
multifiliis]
Length = 203
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI+SR+ SK+ KL+D +A+SG AD AL K L +R +YQ+ + KQ S A+
Sbjct: 62 LSQGYSIISRENSKLCKLSDNVYLATSGMYADFVALSKQLQSRLQMYQYNNQKQASMKAI 121
Query: 61 GQLLSNTLYYK---------------RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 105
LLS TLYYK RFFPYY+FN+L G DN+G G V YDAVGS +
Sbjct: 122 STLLSRTLYYKRYIYFIINFINKYIYRFFPYYTFNLLAGFDNQGNGQVIGYDAVGSGDFK 181
Query: 106 GYSSQGSGSTLIMPFLD 122
Y+ GSG+ LI+P D
Sbjct: 182 QYAVLGSGAQLIVPIFD 198
>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
Length = 245
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQ 62
G+SI +R ++I K+++K ++AS+G AD QK Y++ K +S +
Sbjct: 63 NGFSIPTRFQTRIFKISEKIILASAGMFADAFFFQKKTKTSIKDYEYGIKKAISVESCAF 122
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
+S+ LY KRFFPYY FNVL GLD KG VY++D+VGS+E++ ++ G I P LD
Sbjct: 123 YISSLLYSKRFFPYYVFNVLSGLDENDKGSVYSFDSVGSFEKLKFNCIGESCAAIQPLLD 182
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
+ + L + + S + ++ +K F A++R I GD L+ ++NK GI E
Sbjct: 183 SYFEHQ----LKLKFNLRTKSIQDLINSIKEFFLKASKRKIDIGDGLQFFIINKKGIINE 238
Query: 183 YMELR 187
LR
Sbjct: 239 NYLLR 243
>gi|358253687|dbj|GAA53599.1| 20S proteasome subunit beta 6, partial [Clonorchis sinensis]
Length = 156
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 71/103 (68%)
Query: 23 VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVL 82
V+A++GF DV L KLL R Y++ H K++S A LLS TLY +RFFP+Y ++L
Sbjct: 5 VLATTGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSIL 64
Query: 83 GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
GGLD EG+G VY YD VGS+ERV ++ GS ++ PFLD++L
Sbjct: 65 GGLDEEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRL 107
>gi|160331789|ref|XP_001712601.1| prsB6 [Hemiselmis andersenii]
gi|159766050|gb|ABW98276.1| prsB6 [Hemiselmis andersenii]
Length = 251
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
S G ++ +R ++IIK++ ++AS+G +D+ LQ L+ ++ ++ ++ +
Sbjct: 68 FSFGMALPTRTTTRIIKISSNIILASAGMYSDIFFLQNLIQIGIKKFKTENLEKCLISSC 127
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
LS LY KRFFPYYSFN+L GL+ +G ++ +DA+GS+E+ S G+G + I P
Sbjct: 128 AFYLSYILYSKRFFPYYSFNLLAGLEKNREGSIFCFDAIGSFEKTSISCVGNGQSQIQPI 187
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + S LL +D T LS + +K F +R+I GD L++ ++ K GI
Sbjct: 188 LDGIFQKKS--LLVKKDFQTLLS---VKNCIKGIFLKVAQRNISIGDGLQMFIVTKKGIF 242
Query: 181 REYMELRKD 189
E L+ D
Sbjct: 243 IENHFLKLD 251
>gi|429962010|gb|ELA41554.1| hypothetical protein VICG_01418 [Vittaforma corneae ATCC 50505]
Length = 275
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 110/188 (58%), Gaps = 10/188 (5%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ Y+I SR +KI K+ + +A++GF AD + + + + Q++ +++ A+
Sbjct: 98 SSDYTINSRKMTKIFKIGE-FYLATTGFFAD--SFEVYTNLMYQVKQYETYSRITLKALA 154
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL N LY KRFFPYYS+ +L G DN G VY+YD VGSY++ GS S +I P L
Sbjct: 155 HLLHNLLYSKRFFPYYSYAILCGFDN-GTATVYSYDPVGSYDKTRCRCNGSSSVMIQPLL 213
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+ + + +D P S +E ++LVK F +A+ERD+ T D LEI V+ KD +
Sbjct: 214 DSWIMGKN-----FKDFKEP-SFSETLELVKKAFDAASERDVKTKDYLEIYVIEKDSMSH 267
Query: 182 EYMELRKD 189
E + LRKD
Sbjct: 268 ELIPLRKD 275
>gi|401827105|ref|XP_003887645.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
gi|392998651|gb|AFM98664.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
Length = 290
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I SR+ SKI ++ + + +GF AD + + + + I Q++ + ++ + LLS
Sbjct: 116 INSREMSKIFRIGN-FFLTGTGFYAD--SHEVYVKMEYEIRQYEVDGPINIHSAANLLSK 172
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY +RFFPYYS+ L G DN GK +Y YD VGS+E V GSG ++I P LD+ +
Sbjct: 173 ILYSRRFFPYYSYCTLSGFDN-GKPYIYAYDPVGSFESVTCECNGSGRSMIQPLLDSFID 231
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
+ T LS+ + V L+ FASA ERDI T D LEI VL ++ + + + L
Sbjct: 232 KKNW----HNAEQTQLSQEDCVRLIAKAFASAAERDIKTKDNLEIYVLRENKVVHKVLPL 287
Query: 187 RKD 189
R+D
Sbjct: 288 RRD 290
>gi|169806330|ref|XP_001827910.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
gi|161779358|gb|EDQ31381.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
Length = 276
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 106/189 (56%), Gaps = 10/189 (5%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ Y+I +R +KI K+ D + + GF AD + L + + Q++ +M+ A+
Sbjct: 98 LNAQYNIYTRYSTKIHKIKDY-FLTTVGFHADSHKIA--LTLDYQLKQYEQYDKMTLSAL 154
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ L + LY RFFP YS+ L G +N G+ +Y+YD +GSY++ GSG+ +I P
Sbjct: 155 AEFLHHVLYNNRFFPLYSYCCLCGFEN-GEATIYSYDCIGSYQKTECRVNGSGTAMIQPL 213
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
D+ + + + + +S +A+ LVK F SA E D+ TGD LEI +L+ + +
Sbjct: 214 FDSWISGKNF------ENYSQISFEDALCLVKKAFHSAAEADVKTGDYLEIYILDNNKVE 267
Query: 181 REYMELRKD 189
+E ++LRKD
Sbjct: 268 KEVIDLRKD 276
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL D V+ SGF D L K++ AR +Y+H +NK M+C A+
Sbjct: 41 LSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKMMTCGAI 100
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LS LY +RFFPYY +N++GGLD EGKG T VGSY+R + S ++ P
Sbjct: 101 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKG-ASTALPVGSYQRDPTGWKIS-HCMLPPL 158
Query: 121 LDNQLKS 127
LD +L S
Sbjct: 159 LDTRLVS 165
>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|74630117|sp|Q8SRH6.1|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
Full=26S proteasome beta-type subunit PRE7; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE7
gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 290
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 8/188 (4%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ I SR+ SKI ++ D ++ +GF AD + + + I Q++ + ++ +
Sbjct: 111 SSSMVINSREMSKIFQVGD-FLLTGTGFYADTHEVYVKMV--YEIRQYEVDDSINIHSAA 167
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLS LY KRFFPYYSF VL G + +GK VY+YD +GS+ V GSG ++I P L
Sbjct: 168 NLLSKILYSKRFFPYYSFCVLSGFE-KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLL 226
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+ + + A++ T LS+ + + LV F SA ERD+ T D LE+ V+ ++ + R
Sbjct: 227 DSFIDKKN--WNNAEE--TQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVCVMRENQVMR 282
Query: 182 EYMELRKD 189
E LR+D
Sbjct: 283 ETFPLRRD 290
>gi|449329565|gb|AGE95836.1| 20S proteasome alpha-type subunit [Encephalitozoon cuniculi]
Length = 290
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%), Gaps = 8/188 (4%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ I SR+ SKI ++ D ++ +GF AD + + + I Q++ + ++ +
Sbjct: 111 SSSMVINSREMSKIFQVGD-FLLTGTGFYADTHEVYVKMV--YEIRQYEVDDSINIHSAA 167
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLS LY KRFFPYYSF VL G + +GK VY+YD +GS+ V GSG ++I P L
Sbjct: 168 SLLSKILYSKRFFPYYSFCVLSGFE-KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLL 226
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+ + + A++ T LS+ + + LV F SA ERD+ T D LE+ V+ ++ + R
Sbjct: 227 DSFIDKKN--WNNAEE--TQLSQEDCIRLVVKAFNSAAERDVKTKDNLEVCVMRENQVMR 282
Query: 182 EYMELRKD 189
E LR+D
Sbjct: 283 ETFPLRRD 290
>gi|378754633|gb|EHY64663.1| hypothetical protein NERG_02282 [Nematocida sp. 1 ERTm2]
Length = 242
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S Y+I +R +K L + +++++GF AD + + LA YQ ++NK+M+
Sbjct: 57 SAMYNINTRQATKSFCLDGRFILSTTGFYADSRYIFSKLAYEIDKYQFKYNKKMAIEQAA 116
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL LY RFFP +++ L G + + +++YD VGSY+ GSG+ L+ P L
Sbjct: 117 ALLHVLLYTHRFFPKFTYCCLVGFNENNEPKIFSYDPVGSYQETPCRCNGSGTALLQPML 176
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+ + + ++ V +E E + LVK F S E D+ TGD LE+ V+ KD I R
Sbjct: 177 DSWITRKNWYCEEGKNYV--CTEEEVISLVKDVFNSVAETDVKTGDGLEVYVIKKDQIVR 234
Query: 182 EYMELRKD 189
LR D
Sbjct: 235 SEYPLRSD 242
>gi|396081771|gb|AFN83386.1| 20S proteasome subunit beta type-1 [Encephalitozoon romaleae
SJ-2008]
Length = 289
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I SR+ +KI ++ D + +GF AD + +A + I Q++ ++ + LLS
Sbjct: 115 INSREMTKIFQIGD-LFLTGTGFYADSHEVYVKMA--YEIRQYEVEGSINVHSAANLLSK 171
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY KRFFPYYS+ VL G +N G+ VY+YD VGS+E V GSG ++I P LD+ +
Sbjct: 172 ILYSKRFFPYYSYCVLSGFEN-GRPYVYSYDPVGSFESVTCICNGSGRSMIQPLLDSFVS 230
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
+ LS+ + V L+ F +A ERD+ T D LE+ V+ ++ + R+ L
Sbjct: 231 KKN----WNNAGQAQLSQEDCVRLITKAFNAAAERDVKTKDNLEVYVVRENEVERKVFPL 286
Query: 187 RKD 189
R+D
Sbjct: 287 RRD 289
>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 178
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ ILSR+ ++ KL V+ +GF DV L KLL + Y++ H K +S A+ LL
Sbjct: 34 FVILSRNCPRLFKLGCGNVLGCAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLL 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
S +LY +RFFP+Y N+L GLD + +G +Y+YD VGSYE GY + GS + ++ PFLD+
Sbjct: 94 SVSLYNRRFFPFYVSNILVGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDST 152
Query: 125 LKSPSP 130
+ + P
Sbjct: 153 VGNKPP 158
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQ 62
GY+I +R ++ ++ DK ++ ++GF+AD L K + R +Y H + MS + +
Sbjct: 35 NGYNINTRFSPRVHEVGDKLILGATGFEADALTLVKRIRQRIDLYHDNHKRIMSPSSCSR 94
Query: 63 LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 122
++ LY KRFFPYY + ++ GLD +G G +Y++D VGSYER + GS + ++ FLD
Sbjct: 95 MVQTMLYGKRFFPYYVYTLVAGLDEKGVGALYSFDPVGSYEREWCRAAGSAANFMLSFLD 154
Query: 123 NQLKSPSPLLLPAQDAVTP-----LSEAEAVDLVKTCF 155
NQ+ + +P + L+ +AV+L++ CF
Sbjct: 155 NQVNLHNQ-YVPTSNGTEKMPHRLLTLTQAVNLLQDCF 191
>gi|440491899|gb|ELQ74504.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Trachipleistophora hominis]
Length = 243
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 10/191 (5%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ I SR +KI + D + + +GF AD+ + L Y+++ K++ A+
Sbjct: 60 SSEMGINSRKMTKIFEF-DGFIFSGTGFYADLNEVYFRLRYEVERYENEVEKRIGISALA 118
Query: 62 QLLSNTLYYKRF-FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
L N LY +R YY F+VL G D G+ +Y++D +GSYE+V GS S +I P
Sbjct: 119 HKLLNILYSRRGGLIYYVFSVLVGKDETGEPVLYSFDPIGSYEQVMCKCYGSASPMIQPL 178
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LD S ++ Q+ + L E+V+L K F +A ERD+ TGD L+IVV +DG
Sbjct: 179 LD------STIMKYNQENASYQSLCMEESVELTKKAFFAAAERDVNTGDYLQIVVYKRDG 232
Query: 179 IHREYMELRKD 189
++ E ++LRKD
Sbjct: 233 VNEELVDLRKD 243
>gi|429965201|gb|ELA47198.1| hypothetical protein VCUG_01298 [Vavraia culicis 'floridensis']
Length = 242
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 10/191 (5%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ I SR +KI + D V + +GF AD+ + L Y+++ +++S A+
Sbjct: 59 SSVMGINSRKMTKIFEF-DGFVFSGTGFYADLNEVYFRLRYEVEKYENEIERRISIRALA 117
Query: 62 QLLSNTLYYKRF-FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
L N LY +R YY F VL G D G +Y++D +GSYE+ GS S +I P
Sbjct: 118 HKLLNILYSRRRGLIYYVFCVLIGKDETGDPVLYSFDPIGSYEQTMCRCYGSASPMIQPL 177
Query: 121 LDNQLKSPSPLLLPAQDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LD S ++ Q+ V+ LS E+V+L K F +A ERD+ TGD L+IVV KDG
Sbjct: 178 LD------STIMKHNQENVSYQSLSVEESVELTKKAFFAAAERDVNTGDYLQIVVYKKDG 231
Query: 179 IHREYMELRKD 189
+ E ++LRKD
Sbjct: 232 MTEELVDLRKD 242
>gi|219123814|ref|XP_002182212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406173|gb|EEC46113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 231
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 31/195 (15%)
Query: 3 TGYSILSRDYSKI---------IKLADKCVMA-----SSGFQADVKALQKLLAA--RHLI 46
+GY IL R++ KI + + K V A SSG AD + L++ + A R
Sbjct: 40 SGYDILERNHVKIETTNSGELIVHASTKLVYAPTFVGSSGCNADCEMLKRTVRADTRAAF 99
Query: 47 YQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG 106
Y + + Q + A+ LL LY +R FP+YSF V+GG++N G G VY YDA+GSYE+VG
Sbjct: 100 YHGESDIQTA--AVATLLGQMLYSRRGFPFYSFCVVGGMEN-GAGKVYVYDAIGSYEQVG 156
Query: 107 YSSQGSGSTLIMPFLDNQLKS------------PSPLLLPAQDAVTPLSEAEAVDLVKTC 154
++ G+G L+ P LD +S P ++LP S+ EA+ +
Sbjct: 157 VATSGTGRELLQPILDRSFRSREVFRSTIESELPKQVMLPVAPRQVDCSKDEAISKLVDG 216
Query: 155 FASATERDIYTGDKL 169
+ S +ERDI GD++
Sbjct: 217 YRSVSERDIGVGDRV 231
>gi|303390057|ref|XP_003073260.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302405|gb|ADM11900.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
Length = 287
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 8/188 (4%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+ I SR+ SKI ++ + ++ +GF AD + + + I Q++ + MS +
Sbjct: 108 SSDMVINSREMSKIFRMGN-FLLTGTGFYADTYEVYRKMTDE--ILQYEVDGPMSIHSSA 164
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLS LY +RFFPYYSF L G + +GK +Y YD +GSY+ +GSG ++I P L
Sbjct: 165 NLLSKILYSRRFFPYYSFCTLSGFE-KGKAYLYQYDPLGSYDLTTCVCKGSGRSMIQPLL 223
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+ + + A DA +S+ + + LV F S ERDI T D LEI V+ + +
Sbjct: 224 DSFIDKKN--WNNASDA--QISQEDCIRLVVKAFNSVAERDIKTKDNLEIYVVREHELTH 279
Query: 182 EYMELRKD 189
+ + LR+D
Sbjct: 280 QILPLRRD 287
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 63/94 (67%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SRD K KL ++ V+ +GF D L K++ AR +Y+H +NK M+ A+
Sbjct: 54 LSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAI 113
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVY 94
+LS LY +RFFPYY +N++GGLD EGKG VY
Sbjct: 114 AAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVY 147
>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
Length = 239
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 110/192 (57%), Gaps = 12/192 (6%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SR +I+K+++ C++ SSG +D+ L + L ++ +N +++ +
Sbjct: 57 ISMGYSIPSRLNLRILKISNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQG---SGSTLI 117
L S+ LY +RFFP+Y+FN+L G++ GK YTYDA+GS++ S+ G S + I
Sbjct: 117 VYLTSSLLYSRRFFPFYTFNILTGINELGKASNYTYDAIGSFDCNHASTVGNCQSSAQCI 176
Query: 118 MPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
M +++ + K P+ ++ T L + V L+K F++ + + GD L++ +++K
Sbjct: 177 MDYIEER-KIPND-----RNYKTIL---QVVSLIKIIFSTLCNKQVDMGDILQLFIVSKK 227
Query: 178 GIHREYMELRKD 189
GI E LR D
Sbjct: 228 GILVENSILRLD 239
>gi|393228712|gb|EJD36350.1| N-terminal nucleophile aminohydrolase [Auricularia delicata
TFB-10046 SS5]
Length = 193
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 17 KLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPY 76
L DK V+A +G AD K + R Y+H H+K M ++ +++ LY
Sbjct: 8 NLTDKAVLAVNGLAADGNMFVKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYV------ 61
Query: 77 YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----KSPSPL 131
+N+LGG+D +G G VY++D VGSYER + G+ +L+ PFLDNQ+ + P
Sbjct: 62 --YNILGGIDEQGVGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQQGDHPA 119
Query: 132 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
LP ++ LV F TER I GD L++ V+
Sbjct: 120 HLPLDHVLS---------LVTDAFTGTTERHIEVGDGLQMFVI 153
>gi|312375789|gb|EFR23090.1| hypothetical protein AND_13702 [Anopheles darlingi]
Length = 219
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%)
Query: 34 KALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 93
+ L ++ R +Y+ QH K+MS PA+ Q+LS +Y +RFFPYY NVL GLD GKG V
Sbjct: 24 RLLGSIVGVRMQMYKDQHQKEMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDLNGKGVV 83
Query: 94 YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
Y+YD +G E Y + GS L+ P LDNQ+
Sbjct: 84 YSYDPIGHCEMTTYRAGGSAGPLLQPVLDNQI 115
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 16/176 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI+ + D+ + ++G DV+AL ++L A YQ N+ M+ AM LLSN L ++
Sbjct: 40 KIVPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWNRPMTTRAMANLLSNILNENKW 99
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG +E + DA+G Y++ GSGS + L++ K
Sbjct: 100 FPYLVQIIIGGYVDE--PTLANLDAMGGLVFDDYTATGSGSPFAIAVLEDGFKK------ 151
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
+S EA +L +A +RD+YTGD K+++VV+ KDG+ E++E ++
Sbjct: 152 -------DMSVEEAKELAVRAVRTAGKRDVYTGDRKVQVVVITKDGMKEEFVEFKE 200
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 129 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 188
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV 99
+LS LY +RFFPYY +N++GGLD EG T+ AV
Sbjct: 189 AAMLSTILYSRRFFPYYVYNIIGGLDEEG-----TWRAV 222
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 59/89 (66%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEG 89
+LS LY +RFFPYY +N++GGLD EG
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 59/89 (66%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+SI +RD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ A+
Sbjct: 57 LSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAI 116
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEG 89
+LS LY +RFFPYY +N++GGLD EG
Sbjct: 117 AAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
>gi|300702270|ref|XP_002995154.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
gi|239604000|gb|EEQ81483.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
Length = 282
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 103/184 (55%), Gaps = 11/184 (5%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I SR+ KI + D V + GF AD L +L + L+Y+ + ++S ++ L S
Sbjct: 109 IYSRNTPKIYYIGDYLVTIT-GFYADGIELINILKYQVLLYESFN--KISIHSLANLASK 165
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
+Y KR FPYYS+ L G +G+ VY++D +G +E+V GSG++ I P LD+ ++
Sbjct: 166 VMYSKRLFPYYSYVTLSGF-CDGEPFVYSFDCLGHFEKVSTVCNGSGASFIQPLLDSLIE 224
Query: 127 SPSPLLLPAQDAVTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ + +P+ + E +V+ F +A+ERD+ TGD LE+ V+ ++G + +
Sbjct: 225 KKNWI------GESPVVDEEYTKSVVRKAFDAASERDVKTGDYLEMYVVRENGAVKSVEK 278
Query: 186 LRKD 189
LR+D
Sbjct: 279 LRQD 282
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 16/188 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GY + + KIIK+ D M ++G AD + L + LA Y+ + ++MS A
Sbjct: 36 TAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAA 95
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q LS L+ +F+PY +LGG D + + +Y D GS Y + GSGS + +
Sbjct: 96 QYLSIILHSAKFYPYIVQLLLGGYDTQPR--LYNIDWFGSVTEEKYVATGSGSPTAIGVI 153
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
++Q SP+ LS EAV+L K AS+ RD +TG+ +++VV+ KD +R
Sbjct: 154 EDQY-SPN------------LSMEEAVELAKRAVASSIRRDTFTGNGVDVVVIGKD-FYR 199
Query: 182 EYMELRKD 189
EY KD
Sbjct: 200 EYSFELKD 207
>gi|224007805|ref|XP_002292862.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
gi|220971724|gb|EED90058.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
Length = 219
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 18/188 (9%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN---KQMSCPAM 60
GY I SR ++ + ++ S+G +D ++L++ + R + + N +M ++
Sbjct: 33 GYGINSRRNIQLQQTNLPVMIGSAGCASDCESLKRRV--RLELDSLECNFPSGKMGVQSV 90
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNE--------GKGCVYTYDAVGSYERVGYSSQGS 112
LL LY +R FP+YSF V+ G+D + G G VY YDA+GS+ERV S G+
Sbjct: 91 ANLLQQVLYGRRGFPFYSFCVVAGIDRDEQTGDSKCGMGAVYVYDAIGSFERVAVGSAGT 150
Query: 113 GSTLIMPFLD--NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 170
G L+ P LD +K + ++ QD + + EAV+ V + S ER+I GD++
Sbjct: 151 GRELLQPILDRMGSIKQNNNVI---QDGLAQCTWEEAVNNVARAYQSVAEREISVGDEVV 207
Query: 171 IVVLNKDG 178
I V+ G
Sbjct: 208 ICVVKASG 215
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 16/176 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI+ + D+ + ++G DV+AL ++L A YQ N+ MS AM LLSN L ++
Sbjct: 40 KIVPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWNRPMSTKAMANLLSNILNENKW 99
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG E + D +G Y++ GSGS + L++ K
Sbjct: 100 FPYLVQIIIGGYVEE--PTLANLDPMGGLIFDDYTATGSGSPFAIAVLEDGFKK------ 151
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
+S EA +L +A +RD+YTG K+++VV+ KDG+ E++E ++
Sbjct: 152 -------DMSVKEARELAIRAVRTAGKRDVYTGSRKVQVVVITKDGMKEEFVEFKE 200
>gi|62318933|dbj|BAD94023.1| proteasome component C5 [Arabidopsis thaliana]
Length = 56
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/56 (78%), Positives = 48/56 (85%)
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
P QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L DGI E M+LRKD
Sbjct: 1 PKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 56
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G +LS+ SKI ++ D +A +G D+ +L +LL A +Y+ + ++MS A+
Sbjct: 27 SLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRLLRAEAKLYRARVGREMSTKALA 86
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L +R+FPY+ + ++ G D K +Y+ D G Y S GSG L
Sbjct: 87 TLTSNILSGRRYFPYFGWFLVAGYDE--KPGLYSIDMAGGITEDKYVSAGSGMEFAYSVL 144
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
DN+ ++ + V L +A +RD++TGD + +VV+ K+G
Sbjct: 145 DNEYDE-------------KMNVKKGVKLAIKAINTAIKRDVFTGDGIMVVVITKEG--- 188
Query: 182 EYMELRKD 189
Y EL K+
Sbjct: 189 -YSELSKE 195
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G + S++ +K+ ++ D +A +G D+ +L +LL A +Y+ + ++MS AM
Sbjct: 24 TLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRLLRAEAKLYRARVGREMSVKAMA 83
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+SN L+ R+ PY+++ ++GG D + +Y+ DA G + + GSG + L
Sbjct: 84 TLVSNVLHGSRYLPYFAWFLIGGYDVRPR--LYSIDAAGGVTEERFIAAGSGMEFALALL 141
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ L E VDL +A RD+YTG+ + +V + K+G +R
Sbjct: 142 EENFSDGMDL-------------EEGVDLAVRAVKAAMRRDVYTGEGVTVVTITKEG-YR 187
Query: 182 E 182
E
Sbjct: 188 E 188
>gi|195064491|ref|XP_001996575.1| GH21877 [Drosophila grimshawi]
gi|193895395|gb|EDV94261.1| GH21877 [Drosophila grimshawi]
Length = 223
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D + + + VM G DV ++ L+ R + + + ++ + ++S+T
Sbjct: 52 MTSDLDNLFPMTRQSVMGCIGSWVDVASMNALIKRRGQMRELDNRSKLPTEILASIISST 111
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 127
+ +R FP+ + +L GLD GKG VY Y+ VG R YS GS ++ P L++ +
Sbjct: 112 INSRRLFPWRTSTILAGLDVMGKGAVYQYNDVGQRGRFLYSVLGSARNIMWPQLNHVIGK 171
Query: 128 PS--PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P PL L++ A DLV+ CF A+ GD I ++ KD I + ++
Sbjct: 172 PQHYPL----------LTKERAFDLVRDCFMDASRVHTVIGDTALIKIITKDLIEEQSLK 221
Query: 186 LR 187
LR
Sbjct: 222 LR 223
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 16/188 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + + + KI+ + D+ + ++G DV+AL ++L A+ YQ + M+ AM
Sbjct: 28 SLGNMVETLNIRKILPITDRIAITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLSN L ++FPY ++GG + K + + DA+G Y++ GSGS + +
Sbjct: 88 NLLSNILNENKWFPYMVQIIIGGYVD--KPELASVDALGGLVFEKYTATGSGSPFAIAII 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIH 180
++ + +S EA +L +A +RD+YTG+ K+++VV+ KDG+
Sbjct: 146 EDGYRE-------------DMSIEEAKELAVRAVKTAGKRDVYTGERKVQVVVITKDGMK 192
Query: 181 REYMELRK 188
E++E ++
Sbjct: 193 EEFVEFKE 200
>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 16/186 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + + + KII + D+ + ++G DV+AL ++L A YQ K MS AM
Sbjct: 28 SLGHMVETLNIRKIIPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGKPMSTKAMA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLSN L ++FPY +LGG E + D +G Y++ GSGS + L
Sbjct: 88 NLLSNILNGNKWFPYLVQIILGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIH 180
++ K +S EA +L +A +RD+YTG K++IV + K+GI
Sbjct: 146 EDGYKK-------------DMSIEEAKELAVRAVRTAGKRDVYTGSRKIQIVAITKEGIT 192
Query: 181 REYMEL 186
E++E
Sbjct: 193 EEFVEF 198
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS G I+SR+ K+ L D+ +A +G ADV L +++ A Y+ + MS A+
Sbjct: 27 MSYGSFIMSRNAKKVYLLNDRVGIALTGLYADVSGLVRIMNAEISYYETTNETTMSLYAI 86
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+L SN LY + P+ +++GGLD +GK +YT DA+GS Y + GSG T +
Sbjct: 87 SKLFSNILYSYKMLPFLIESIIGGLDRDGKPKIYTLDALGSVTEDKYMAVGSGGTTALGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+ D +T + EAE + + T + ERD +GD ++++++ +G
Sbjct: 147 LE----------YSYNDNLT-IDEAEKIAI--TALKTTMERDSSSGDGIDLLIIKSEG 191
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G ++S+ K+ ++ DK MAS+G AD++ L +++ A +Y+ N +
Sbjct: 25 VSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELDSNISPKVWTV 84
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY +R FPYY+ V+GGLD EG +Y+ D +G+ Y + GSG+ L +
Sbjct: 85 AKLLSYILYERRLFPYYAEIVVGGLDEEGS-HLYSLDPIGAIIEDDYVALGSGTQLAISI 143
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+++ K +S EA+ L +A +RD +GD ++++V+ K G
Sbjct: 144 VESNYKK-------------DMSLDEALSLALKSVYAAMKRDAASGDGVDVLVIGKSG 188
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 16/176 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI+ + D+ + ++G DV+AL ++L A YQ + M+ AM LLSN L ++
Sbjct: 39 KILPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMTAKAMAHLLSNILNENKW 98
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG E + D +G Y++ GSGS + L++ +
Sbjct: 99 FPYMVQIIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGFRK------ 150
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
+S EA +L +A +RD+YTGD K+++VV++KDG+ E++E ++
Sbjct: 151 -------DMSLEEAKELAVRAVRTAGKRDVYTGDRKVQVVVISKDGMKEEFVEFKE 199
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 13/182 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
M+ G ++SR+ K+ + ++ +A SG ADV A+ + L A Y+ + MS A+
Sbjct: 28 MAYGSFVMSRNAKKVFLINNRAAIAMSGLYADVGAILRYLTAESKYYELTEERTMSLYAI 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY + P+ ++GG+D +G+ +YT D++GS Y + GSG+T + F
Sbjct: 88 SKLLSGILYSYKMLPFIIEALVGGIDRDGQPKIYTLDSLGSVSEDKYMAVGSGATTALGF 147
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++Q L Q AV L + ERD TGD ++++ ++ G
Sbjct: 148 LEDQYNDALSLDQAEQVAVGALR-------------ISMERDASTGDGIDVISISTSGAV 194
Query: 181 RE 182
+E
Sbjct: 195 KE 196
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 16/188 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + + + KI+ + D+ + ++G DV+AL ++L A+ YQ + M+ AM
Sbjct: 28 SLGNMVETLNIRKILPITDRIAITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLSN L ++FPY ++GG + K + + DA+G Y++ GSGS + +
Sbjct: 88 NLLSNILNENKWFPYMVQILIGGYVD--KPELASVDALGGLVFEKYTATGSGSPFAIAII 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIH 180
++ + +S EA +L +A +RD+YTG+ K+++VV+ KDG+
Sbjct: 146 EDGYRE-------------DMSIEEAKELAVRAVRTAGKRDVYTGERKVQVVVITKDGMK 192
Query: 181 REYMELRK 188
E++E ++
Sbjct: 193 EEFVEFKE 200
>gi|195046971|ref|XP_001992246.1| GH24307 [Drosophila grimshawi]
gi|193893087|gb|EDV91953.1| GH24307 [Drosophila grimshawi]
Length = 285
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 1/178 (0%)
Query: 10 RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLY 69
R + K+ + + ++ S G DV A+ L+ R +Y+ + K +S A+ ++S +Y
Sbjct: 109 RKHFKLFPMTPQSIIGSIGNWGDVVAMTALIRRRVQVYEQDNKKTISTEALASMISTLMY 168
Query: 70 YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 129
+R FP +L GLDNEGKG V+ +D +G+ ER Y G +++ L + +
Sbjct: 169 NRRLFPCLMITILAGLDNEGKGAVFHFDEIGNRERCRYLIIGGARDIMLAKLRHSIGEID 228
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELR 187
++P+ D L++ A + + CF A+ G+ + I + G ++LR
Sbjct: 229 SGIIPS-DQYQQLTKERAFGIARDCFIHASHLRADIGNTVMIKTIYTKGSQETILKLR 285
>gi|195022115|ref|XP_001985520.1| GH17107 [Drosophila grimshawi]
gi|193899002|gb|EDV97868.1| GH17107 [Drosophila grimshawi]
Length = 254
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 5 YSILSRDY------SKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP 58
+++++ DY + + + VM G DV ++ L+ R + + + ++
Sbjct: 74 FALIASDYCMTSELDNLFPMTRQSVMGCIGSWVDVASMNALIKRRGQMRELDNRSKLPTE 133
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
+ ++S T+ +R FP+ + +L GLD GKG VY Y+ VG R YS GS ++
Sbjct: 134 ILASIISGTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDVGQRGRFLYSVLGSARNIMW 193
Query: 119 PFLDNQLKSPS--PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
P L++ + P PL L++ A DLV+ CF A+ GD I ++ K
Sbjct: 194 PQLNHVIGKPQHYPL----------LTKERAFDLVRDCFMDASRVHTVIGDTALIKIITK 243
Query: 177 DGIHREYMELR 187
D I + ++LR
Sbjct: 244 DLIEEQSLKLR 254
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+ ++AD+ M ++G D ++L +L+ +Y+ +H K +S A
Sbjct: 32 TMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARLMQVECSLYKVRHGKPISVGAAA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L R++PYY ++GG+D G VY+ DA+ G+ + S GSGS +
Sbjct: 92 TLLSNYLQQNRYYPYYVQLLVGGVDRNGP-SVYSVDAMGGASKETDIVSTGSGSPMAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+++ + ++E EAVDL +A RD +G+ + IVV+ +D
Sbjct: 151 LEDRYHA-------------DMNEPEAVDLATRSLKAAMRRDSASGENISIVVITRD 194
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
+ KI+ + DK + ++G D++AL ++L A YQ K M+ AM LLSN L
Sbjct: 36 NIKKILPITDKIAITTAGSVGDLQALARMLEAEARYYQFTWGKPMTAKAMANLLSNILNE 95
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 130
++FPY ++GG E + + D +G Y++ GSGS + L++ K
Sbjct: 96 SKWFPYMVQIIIGGYVEE--PTLASLDPLGGLIFDNYTATGSGSPFAIAILEDGYKE--- 150
Query: 131 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
++ EA +L +A +RD+YTG+ K+++V + KDG+ E++E ++
Sbjct: 151 ----------DMTIEEARELAIRAVRTAGKRDVYTGERKIQVVTITKDGMKEEFVEFKE 199
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 95/188 (50%), Gaps = 19/188 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S++ +KI ++ D +A +G D+ ++ +LL A +Y+ + ++MS +
Sbjct: 31 TMGNMITSKEVTKIFQIDDHLAIAGAGLVGDILSMVRLLRAEARLYRARVGREMSVKVLT 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L++N L+ R + Y+++ ++GG D E + +Y+ DA G Y + GSG + L
Sbjct: 91 TLIANILHGGRGYGYFAWFLVGGYDTEPR--LYSIDAAGGVTEEKYVAAGSGMEFALAIL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+N+ LS + + L +A +RD+YTG+ + +VV+ K+G
Sbjct: 149 ENEFSE-------------GLSLEDGMRLAAKAVNAAIKRDVYTGEGITLVVVTKEG--- 192
Query: 182 EYMELRKD 189
Y EL D
Sbjct: 193 -YRELGDD 199
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G + S++ +K+ ++ D +A +G D+ +L +LL A +Y+ + ++MS A+
Sbjct: 31 TLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDILSLVRLLRAEAKLYRAKVGREMSVKALA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+SN L+ R PY+++ ++GG D + + +Y+ DA G + + GSG + L
Sbjct: 91 TLVSNVLHGSRHLPYFAWFLIGGYDVKPR--LYSIDAAGGVTEERFIAAGSGMEFALALL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ L E +DL +A RD+YTG+ + +V + K+G +R
Sbjct: 149 EENFSDGMGL-------------DEGIDLAVRAVKAAIRRDVYTGEGVTVVAITKEG-YR 194
Query: 182 E 182
E
Sbjct: 195 E 195
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI+ + D+ + ++G DV+AL ++L A YQ + M AM LLSN L ++
Sbjct: 41 KILPITDRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMKTRAMANLLSNILNENKW 100
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG +E + + + DA+G Y++ GSGS + +++ +
Sbjct: 101 FPYMVQILIGGYVDEPE--LASLDALGGLVFDEYTATGSGSPFAIAIIEDGYRE------ 152
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
+S EA +L +A +RD+YTGD K+++V + +DG+ E++E ++
Sbjct: 153 -------DMSVEEAKELAVRAVRTAGKRDVYTGDRKVQVVTITRDGMKEEFVEFKE 201
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + D+ +AS+G AD++ L K+L Y+ + ++ S AM
Sbjct: 28 VSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSVHAM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +RF P+++ ++GG+D+EG + D +GS Y++ G+G+ L +
Sbjct: 88 AKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLI-VMDPLGSLIEDNYAALGTGAKLAIAI 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+D K L QDA L +A ERD +G +++VV++K+G
Sbjct: 147 IDASYKPDMSL----QDAKK---------LAVQALKAALERDPVSGGGIDLVVIDKNGAR 193
Query: 181 REYMELR 187
E ++L+
Sbjct: 194 EEEVKLQ 200
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G +LS++ +K+ ++ D +A +G D+ +L +LL A +Y+ + +++S A+
Sbjct: 28 SLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRLLRAEVKLYRAKVGREISVKALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L+ RF PY+ + ++ G D K +Y+ D G +++ GSG L L
Sbjct: 88 TLTSNILHGSRFMPYFGWFLIAGYDE--KPALYSLDMAGGVTEDKFTAAGSGMELAFAVL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG--- 178
++ K ++ E V L AT RD++TGD + +V + ++G
Sbjct: 146 EDGYKD-------------DINVEEGVKLALKAIKIATRRDVFTGDGITLVTVTEEGYRE 192
Query: 179 IHREYME 185
++RE +E
Sbjct: 193 LNREEIE 199
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + DK +AS+G AD++AL K+L Y+ + K+ S AM
Sbjct: 28 VSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKILKLNAKSYELEMKKKPSVHAM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +RF P+++ ++GG+D EG + D +GS Y++ G+G+ L
Sbjct: 88 AKLLSVVMFSRRFMPFFAEVLVGGVDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAAAV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD ++ +S EA L +A ERD +G +++VV+++ G
Sbjct: 147 LDGNYRN-------------DMSIEEAKKLAVQALKAAIERDPVSGGGIDLVVVDEKGAR 193
Query: 181 REYMELR 187
E + ++
Sbjct: 194 EEEVRVQ 200
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 90/177 (50%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I +R+ +KI K+ + +A +G D+ L +LL A +Y Q K+MS A+
Sbjct: 31 SLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N + ++FPY ++ ++GG D + K +Y+ D VG Y++ GSG L
Sbjct: 91 TLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMVGGITEDKYATAGSGMEFAYSIL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D++ K L+ E + L +A +RD+++GD + +V + K+G
Sbjct: 149 DSEYKD-------------NLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEG 192
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GY I S+ K+ ++AD+ M +G D + L +++ +YQ + +++++ A
Sbjct: 32 TMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARIITVECNLYQIRRSREITVGAAS 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L R+FPYY ++GG+D+ G VY+ DA+ G+ + S GSGS +
Sbjct: 92 TLLSNYLNQNRYFPYYVQLLVGGIDDHGP-SVYSVDAMGGATKEEDIVSTGSGSPMAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+++ + P ++E EAV+L SA +RD +G+ + +VV+ KD
Sbjct: 151 LEDRYR-------PG------MNEDEAVELAVRALRSAMKRDAGSGEGIHVVVITKD 194
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 16/179 (8%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
+ KI+ + D+ + ++G DV+ L ++L A YQ K M+ AM LLSN L
Sbjct: 36 NIKKILPITDRIAITTAGSVGDVQMLARMLEAEARYYQFTWGKPMTAKAMANLLSNILNE 95
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 130
++FPY ++GG E + D +G Y++ GSGS + L+ +
Sbjct: 96 NKWFPYLVQIIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAILEEGYRK--- 150
Query: 131 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
+S EA +L +A +RD+YTGD K+++VV+ K+G+ E++E ++
Sbjct: 151 ----------DMSIEEARELAIRAVRTAGKRDVYTGDRKIQVVVITKEGMKEEFVEFKE 199
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G ++S++ +KI ++ + +A +G D+ +L ++L A +Y+ + ++MS A+
Sbjct: 4 TIGNMVMSKNVTKIFQIDEHLALAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKALA 63
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +N L ++FPY+ + ++GG D K +Y+ D G Y S GSG L
Sbjct: 64 TLTANILNGTKYFPYFGWFLIGGYDE--KPNLYSVDMAGGMTEDKYVSAGSGMEFAYAVL 121
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+N+ K +S E V L +A +RD++TGD + +V + K+G
Sbjct: 122 ENEYKE-------------DMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEG--- 165
Query: 182 EYMELRK 188
Y EL K
Sbjct: 166 -YRELDK 171
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 16/184 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G +LS +K+ ++ D +A +G D+ +L +LL A +Y+ + +++MS A+
Sbjct: 28 SLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRLLRAEAKLYRAKVSREMSVKALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L+ R F Y ++ ++GG D+ + +Y+ DA G +++ GSG L
Sbjct: 88 TLTSNILHSGRGFAYMAWFLVGGYDSAPR--LYSIDAAGGVTEDRFTAAGSGMEFAFSVL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + PL E V L +AT+RD++TG + +V + ++G +R
Sbjct: 146 EENYRDGIPL-------------EEGVKLALRAIKAATKRDVFTGGGVTLVTITEEG-YR 191
Query: 182 EYME 185
E+ E
Sbjct: 192 EWSE 195
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G +LS + +K+ + D +A +G D+ +L +LL A +Y+ + K+MS A+
Sbjct: 28 SLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRLLRAEAKLYRARVGKEMSVKALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L+ RF PY+ + ++ G D K +Y+ D G +++ GSG L
Sbjct: 88 TLTSNVLHGNRFMPYFGWFLIAGHDE--KPGLYSIDMAGGVTEDKFTAAGSGMEFAFSIL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + PL V L +AT RD++TG + +V + ++G +R
Sbjct: 146 EENYREDMPL-------------EGGVKLALRAIKAATRRDVFTGGGVTLVTVTREG-YR 191
Query: 182 EY 183
E+
Sbjct: 192 EW 193
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G ++S+ +KI ++ D +A +G D+ +L + L A +Y+ + K+MS A+
Sbjct: 30 SLGNMVISKGVTKIFQVDDHLALAGAGAVGDILSLVRALRAESKLYRAKVGKEMSTKALA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L +++ PY+ + ++GG D K +Y+ D G Y S GSG L
Sbjct: 90 TLTSNILSGRKYLPYFGWFLIGGYDE--KPSLYSIDMAGGITEDKYVSAGSGMEFAYSIL 147
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
DN+ L V L +A +RD++TGD + +V ++++G
Sbjct: 148 DNEYSEKITL-------------NNGVKLAIKAINAAIKRDVFTGDGIMVVTIDREG--- 191
Query: 182 EYMELRKD 189
Y EL K+
Sbjct: 192 -YRELSKE 198
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + DK +AS+G AD++AL K+L Y+ + K+ + AM
Sbjct: 28 VSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKILKLNARSYELEVKKKPTVKAM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +RF P+Y+ ++GG+D EG + D +GS Y++ G+G+ L +
Sbjct: 88 AKLLSVVMFSRRFMPFYAEVLVGGVDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAVSL 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + ++ EA L +A ERD +G +++VV++ G
Sbjct: 147 LDASYRP-------------DMTVEEAKKLAVQAVKAAIERDPVSGGGIDLVVVDGGGAR 193
Query: 181 REYMELR 187
E ++++
Sbjct: 194 EEEVKVQ 200
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I +++ +KI K+ + +A +G D+ L +LL A +Y+ K+MS A+
Sbjct: 28 SLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L ++FPY + ++GG D + + +++ D VG Y++ GSG L
Sbjct: 88 TLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVGGITEDNYAAAGSGMEFAYSIL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D++ + +S + + L A +RD++TGD L +V + KDG ++
Sbjct: 146 DSEYRE-------------EMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDG-YK 191
Query: 182 EY 183
EY
Sbjct: 192 EY 193
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I +++ +KI K+ + +A +G D+ L +LL A +Y+ K+MS A+
Sbjct: 31 SLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L ++FPY + ++GG D + + +++ D VG Y++ GSG L
Sbjct: 91 TLLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVGGITEDNYAAAGSGMEFAYSIL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D++ + +S + + L A +RD++TGD L +V + KDG ++
Sbjct: 149 DSEYRE-------------EMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDG-YK 194
Query: 182 EY 183
EY
Sbjct: 195 EY 196
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G +LS + +K+ + D +A +G D+ +L +LL A +Y+ + K+MS A+
Sbjct: 28 SLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRLLRAEAKLYRAKVGKEMSVKALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L+ RF PY+ + ++ G + G+ +Y+ D G +++ GSG L
Sbjct: 88 TLTSNVLHGSRFMPYFGWFLIAG--HTGEPGLYSVDMAGGVTEDRFTAAGSGMEFAFSIL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + K L E V L +AT RD++TG + +V + +G ++
Sbjct: 146 EAEFKENMTL-------------EEGVKLALRAIKAATRRDVFTGGGVTLVTVTDEG-YK 191
Query: 182 EYME 185
E+ E
Sbjct: 192 EWSE 195
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + +++ +KI ++ ++ +A +G D+ +L +LL A +Y+ + + MS A+
Sbjct: 28 SLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLVRLLRAEVRLYRSRVGRSMSAKALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L R+FPY + ++GG D+ + +Y+ D G Y + GSG L
Sbjct: 88 TLLANILNGTRYFPYLVWFLVGGYDDAPR--LYSVDMAGGITEDKYVAAGSGMEFAFSIL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+Q K +S E V L SA +RD++TG+ + +V + + G +R
Sbjct: 146 DSQYKP-------------EMSVEEGVKLAVRAINSAIKRDVFTGEGITVVTITEKG-YR 191
Query: 182 EYME 185
E E
Sbjct: 192 ELSE 195
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 16/179 (8%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
+ KI+ + D+ + ++G D++AL ++L A YQ K M+ AM LLSN L
Sbjct: 36 NIKKILPITDRIAITTAGSVGDLQALARMLEAEAKYYQFTWGKPMTAKAMANLLSNILNE 95
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 130
++FPY ++GG E + + D +G Y++ GSGS + L++ K
Sbjct: 96 SKWFPYMVQIIIGGYVEE--PTLASLDPLGGLIFDNYTTTGSGSPFAIAILEDGYKE--- 150
Query: 131 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMELRK 188
+S +A +L +A +RD+YTG+ K++++ + K+G+ E++E ++
Sbjct: 151 ----------DMSIEDARELAIKAVRTAGKRDVYTGERKIQVITITKEGMKEEFVEFKE 199
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GY I S+ KI ++AD+ M ++G D + + +L+ +YQ + + ++ A+
Sbjct: 32 TMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARLMTVECSLYQIRRGRPITIGAVA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPF 120
LLSN L R++P+Y ++GG+D EG +Y DA+G R + GSGS +
Sbjct: 92 TLLSNILNANRYYPFYVQLLVGGVD-EGGPKLYAVDALGGASREEEMVATGSGSPMAFGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ LSE EAV L SA +RD +G+ + +VV+ K+ +
Sbjct: 151 LEDRYSK-------------DLSEDEAVALAVRAIRSAMKRDAGSGEGIHVVVITKEA-Y 196
Query: 181 REYME 185
RE E
Sbjct: 197 RELTE 201
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + K +G AD++ L +AA I + + + + + ++
Sbjct: 28 GNFLVSKTTKKTFPITPKVGATCAGLVADMQILTLQIAALAKIRKMELKRDVPPNTIAKM 87
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +R+FP + ++GG+ + K ++T D +GS Y++ G+G+ + + LD
Sbjct: 88 MSNMMYERRYFPLLTQVIVGGIID--KPILFTLDPLGSVLPDEYAAVGTGAEMALGVLDP 145
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q K P+ +++ EA+DL K SA RD +GD L+++V+ KDGI +EY
Sbjct: 146 QFK-PN------------MTQEEAIDLAKRAVRSAALRDSASGDGLDVLVITKDGI-KEY 191
Query: 184 ME 185
E
Sbjct: 192 TE 193
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 15/183 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I SR KI+ L++ M SG AD + L +L +Y+ + + S +
Sbjct: 46 TAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVRFVA 105
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLSN L+ +FFPY ++GG D + + +YT D GS Y++ GSGS + L
Sbjct: 106 SLLSNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDLFGSITEDKYTATGSGSPIAYGVL 163
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + + LS EA+ + T SA RD +GD ++VV+ G
Sbjct: 164 EERYRE-------------DLSVEEAIKVATTAIRSAVLRDAASGDGADVVVIGPQGYEE 210
Query: 182 EYM 184
+++
Sbjct: 211 KFI 213
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + +R+ +KI K+ + +A +G D+ L +LL A +Y Q ++MS A+
Sbjct: 28 SLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQFGREMSARALA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L ++FPY ++ ++GG D + + +Y+ DAVG Y + GSG L
Sbjct: 88 TLLANILNGYKYFPYMAWFLVGGYDEKAR--LYSVDAVGGITEDKYMAAGSGMEFAYSIL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D + ++ E V L +A +RD+++GD + +V + K+G
Sbjct: 146 DAEYSD-------------DITVKEGVKLAVKAINTAIKRDVFSGDGILVVTITKEG 189
>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 197
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + K A +G AD++ L +AA I + + + + + ++
Sbjct: 30 GNFLVSKSSKKTFSITSKVGAACAGLVADMQILTLQIAALAKIRKMELKRDVPPNTVAKM 89
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +R+FP + ++GG+ + K +YT D +GS Y++ G+G+ + + LD
Sbjct: 90 MSNMMYERRYFPLLTQVIVGGVVD--KPILYTLDPLGSVLPDEYAAVGTGAEMALGVLDP 147
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q K P+ +++ EA+DL K SA RD +GD L+I+V+ KDG +E+
Sbjct: 148 QFK-PN------------MTQEEAIDLAKRAVRSAALRDSASGDGLDILVVTKDG-TKEF 193
Query: 184 ME 185
E
Sbjct: 194 TE 195
>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 205
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
ILS+ K+ + + + +G D+ L ++L Y+ +H +++ ++ +LLS
Sbjct: 35 ILSKSVRKLFPITEHTAVGFAGLTGDMNFLYRVLKTEAKNYELEHGREIKTRSLAKLLSI 94
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY + FP + V+GG D ++ DAVGS Y++ GSGS L + ++ +
Sbjct: 95 ILYSYKLFPMLTEAVVGGFDE--APSLFVLDAVGSLLEERYTALGSGSQLALSIIEQSYR 152
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
PL EA +L +A ERD+ +GD ++++V+ ++GI E
Sbjct: 153 EDMPL-------------EEAKNLAVKAVLAAIERDVLSGDGVDVLVITREGIKSE 195
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SR KI+K+ D M +G AD + L + +Y+ + ++++ M
Sbjct: 36 TAGTLIASRTVKKIVKITDYAAMTIAGLVADAQMLADAIREEARLYETMNKRKLTVKGMA 95
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L+ +++PY ++GG D E + +Y D GS +S GSG
Sbjct: 96 TLLANVLFSTKYYPYLVQLIVGGYDTEPR--LYNLDYFGSITEEKMTSTGSG-------- 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
SP L + +D LS EA++L A RD TGD ++++ ++ GI
Sbjct: 146 -----SPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDSATGDGVDVIAISSGGIRE 200
Query: 182 EYMELRK 188
++ L++
Sbjct: 201 SFIPLQQ 207
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + DK +AS+G AD++ L K+L Y+ + ++ S +M
Sbjct: 28 VSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +RF P+++ ++GG+D EG + D +GS Y++ G+G+ L +
Sbjct: 88 ARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAVAV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + ++ EA L +A ERD +G +++ +++K+G
Sbjct: 147 LDTGYRP-------------DITVEEAKKLAVQALKAAIERDPVSGGGIDLAIVDKNGAR 193
Query: 181 REYMELR 187
E + ++
Sbjct: 194 EEEVRVQ 200
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G+++ SR K+ K+ D MAS G AD++ L K+ A +Y + S + +L
Sbjct: 32 GFTMFSRSGKKVFKVNDNIGMASIGILADMQVLTKIAKAYMSLYSLDTKTRPSIRSAAKL 91
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS L+ R PY+ ++GG+D+EG ++ DA+GS Y++ G+G+ L + L++
Sbjct: 92 LSYVLFSNRILPYFVEVLVGGIDDEGP-HLFIMDALGSLIEDDYAAVGTGTKLAIAILES 150
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
K P +S EA DL + RD +GD ++I+ + +G E
Sbjct: 151 NYK-------PG------MSIKEARDLAIKAINQSISRDPVSGDGIDILTITGNGSTEET 197
Query: 184 MELR 187
+ L+
Sbjct: 198 IPLQ 201
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+ ++ D M ++G D + L +L+ +Y+ + N+ M+ +
Sbjct: 30 TMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLVNVESQLYKMRRNESMTIKGIA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L+SN L R++P ++GG+D G G +Y+ DA+ GS E S+ GSGS +
Sbjct: 90 TLMSNFLNSNRYYPMMVQLLIGGVDKNGPG-IYSLDALGGSIEETRISATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++Q + ++ E +DL +AT+RD +G+ +++VV+ K+
Sbjct: 149 LEDQYRE-------------DMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFR 195
Query: 181 R 181
R
Sbjct: 196 R 196
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SR KI ++AD+ M ++G D + L +L++ +Y+ + ++ + A+
Sbjct: 33 TMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLARLISVEIKLYEIRKEEKPTVKAIA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L R+FPY+ ++GG+D G +Y+ D + G+ E + + GSGS
Sbjct: 93 TLLSNILNSVRWFPYFVQLLVGGVDKRGP-SIYSIDLLGGAIEEIDIVATGSGSPTAYGV 151
Query: 121 LDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L +D TP ++ + V+L SA RD +GD +++V + KDG
Sbjct: 152 L--------------EDRYTPEITVDDGVELAVRAIYSAMRRDSASGDGIDVVKITKDG- 196
Query: 180 HREYMELRKD 189
Y EL K+
Sbjct: 197 ---YFELSKE 203
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + DK +AS+G AD++ L ++L + Y+ + K+ + AM
Sbjct: 28 VSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARILKLNVMSYELEVRKKPTVRAM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +R P+Y+ ++GG+D EG + D +GS Y++ G+G+ L +
Sbjct: 88 AKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAVSL 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + +S EA L +A ERD +G +++ V++ +G
Sbjct: 147 LDATYRP-------------DISLQEAKKLAVQAIKAAIERDPVSGGGIDLAVVDNNGAR 193
Query: 181 REYMELR 187
E ++++
Sbjct: 194 EEEVKIQ 200
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
+ KII + D+ + ++G DV+ + ++L A YQ + MS AM LLSN L
Sbjct: 55 NIRKIIPITDRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMSTKAMANLLSNILNE 114
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 130
R+FPY ++GG E + D +G Y++ GSG+ + L+ +
Sbjct: 115 NRWFPYLVQIIIGGYVEE--PTIANLDPLGGLIFEDYTATGSGTPFALAILEEGYRK--- 169
Query: 131 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMEL 186
L +A DL +A RD+YTG K++++ + KDG+ E+++L
Sbjct: 170 ----------NLGIEKAKDLAIKAIKAAGSRDVYTGSKKVQVMTITKDGMREEFVKL 216
>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 194
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + +K +G AD++ L +AA I + + + + + ++
Sbjct: 26 GNFLVSKSTKKTFPITNKVGATCAGLVADMQILTLQIAALAKIRKMELKRDVPPNTVAKM 85
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +R+FP + ++GG+ + K +YT D +GS Y++ G+G+ + + LD
Sbjct: 86 MSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDP 143
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q K P+ +++ EAVDL K +A RD +GD L+I+V+ KDG EY
Sbjct: 144 QFK-PN------------MTKDEAVDLAKRAVRAAALRDSASGDGLDILVITKDGTE-EY 189
Query: 184 ME 185
E
Sbjct: 190 SE 191
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ K+ KL + +A +G D++ L +++ Y+ +++++S A
Sbjct: 25 LSYGDFVLSKSARKVFKLG-RFGIAGAGIVGDIQTLTRIMNVEIKYYEMYNSRKISARAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY + PY S + GG+D +G ++ D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSVILYQNKVLPYISELLFGGVDEDGP-KLFILDPIGSLIEDSYAAVGSGARVAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + L+ A +L SA ERD+ +GD ++I+++NK+ I+
Sbjct: 143 LEAEYNE-------------SLTSEAAKELAIKSMKSAVERDVMSGDGIDILIINKNNIY 189
Query: 181 REYMEL 186
+++++
Sbjct: 190 EDFIKI 195
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G I+SR K+ ++AD V+A++G AD+++L ++++A + + + +M A
Sbjct: 29 ISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSLSRIISAEIMYRELLSSSKMRVRAA 88
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY + P+ S + G D EG +Y D VGS Y++ G+G+++ +
Sbjct: 89 AKLLSAILYSYKLMPFLSEIIFAGFDEEGY-HLYVLDPVGSIIEDDYAAIGTGASIAIGV 147
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
++++ K+ L+ +A +L +A RD +GD ++I V+ +GI+
Sbjct: 148 IESEYKN-------------TLTIDQATELAIKSVKAAISRDAVSGDGIDIAVVTNNGIN 194
Query: 181 REYMEL 186
+ L
Sbjct: 195 ERSILL 200
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+LSR+ KI + + + +G DV L K+L Y+ QH +++ ++ +LLS
Sbjct: 33 VLSRNARKIHMITNHIGVGFAGLMGDVNFLVKVLRLEAKNYELQHGREIKTRSLAKLLSV 92
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY + P + V+GG D EG +Y D VGS Y + GSG+ L + +++
Sbjct: 93 ILYSYKLAPMLTEVVVGGYDEEGP-SLYILDPVGSVIEEKYVAVGSGAQLALGYIE---- 147
Query: 127 SPSPLLLPAQDAVTPLSEAE--AVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P + L EAE AV+ VKT ERD+ +GD +++VV++K+G
Sbjct: 148 -------PRYNPGLGLKEAEELAVNAVKTVI----ERDVLSGDGIDLVVIDKNG 190
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+ +R+ +KI K+ + +A +G D+ +L +LL A +Y+ K MS A+ LL+N
Sbjct: 2 VYARNVTKIHKVDEHLAIAGAGDVGDILSLVRLLRAEARLYKANVGKPMSVKALATLLAN 61
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L ++FPY+ + ++GG D E + +++ D G Y + GSG LD++ K
Sbjct: 62 ILNGTKYFPYFVWFLVGGYDEEPR--MFSVDMAGGVTEDKYVAAGSGMEFAYSVLDSEYK 119
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
LS E + L A +RD+++GD + +V + ++G ++EY
Sbjct: 120 E-------------DLSVKEGIKLAVKAINVAIKRDVFSGDGILVVTITREG-YQEY 162
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 16/182 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + + +G AD++ L +AA I + + + + + ++
Sbjct: 26 GNFLVSKSTKKTFPITSQVGATCAGLVADMQILTLQIAALAKIRKMELKRDVPPNTIAKM 85
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +R+FP + ++GG+ + K +YT D +GS Y++ G+G+ + + LD
Sbjct: 86 MSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDP 143
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q K P+ +S+ EA+DL K SA RD +GD ++I+V+ KDGI E+
Sbjct: 144 QYK-PN------------MSKDEAIDLAKRAVRSAALRDSASGDGIDILVITKDGIE-EF 189
Query: 184 ME 185
E
Sbjct: 190 TE 191
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS G I+S+ K+ K+ D+ MA +G AD++A+ + L Y+ + ++M +
Sbjct: 25 MSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIARALENEIRYYEISNKRKMKVRSA 84
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LL LY + FP + V GG D+E + ++ D VGS YS+ G+G+ L M
Sbjct: 85 ARLLGLILYSNKLFPLMTETVFGGYDDEPR--IFVLDPVGSVIEEKYSAVGTGAPLAMAL 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
LD + + +S EA +L A+ RD +GD ++++V+
Sbjct: 143 LDKEYRE-------------DMSLEEAQNLAIESVKVASGRDSLSGDGIDVLVI 183
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I S+ K+ ++ D M ++G D + L +L++ +Y+ + ++ M+ +
Sbjct: 30 TMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGIT 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L+SN L R++P ++GG+D G G +Y+ DA+ GS E S+ GSGS +
Sbjct: 90 TLMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDAMGGSIEETRISATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++Q + ++ E +DL +AT+RD +G+ +++VV+ K+
Sbjct: 149 LEDQYRE-------------NMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFK 195
Query: 181 R 181
R
Sbjct: 196 R 196
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 18/192 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I S+ K+ ++ D M ++G D + L +L++ +Y+ + N+ M+ +
Sbjct: 30 TMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L+SN L R++P ++GG+D G +Y+ DA+ GS E S+ GSGS +
Sbjct: 90 TLMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDAMGGSIEETRISATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++Q K ++ E +DL +A +RD +G+ +++VV+ K+
Sbjct: 149 LEDQYKE-------------DIAVKEGLDLAIRAIHNAMKRDSASGENIDVVVITKEAFK 195
Query: 181 R---EYMELRKD 189
R E ++ R+D
Sbjct: 196 RLDPEEVKSRRD 207
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+LSR+ KI + D + +G DV L K+L Y+ QH +++ +M +LLS
Sbjct: 33 VLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLRLEAKNYELQHGREIRARSMAKLLSL 92
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY + P + V+GG D+EG +Y D VGS Y + GSG+ L + +++ +
Sbjct: 93 ILYNYKLAPMLTEVVVGGFDDEGP-SLYILDPVGSLIEEKYVAVGSGAQLALGYIEPRY- 150
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
SPS L AEA +L + ERD+ +GD +++ + + G
Sbjct: 151 SPSITL------------AEAEELAVNAIRTVVERDVLSGDGIDLATITRSG 190
>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 194
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 16/185 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + K +G AD++ L +AA I + + + + + ++
Sbjct: 26 GNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKM 85
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +R+FP + ++GG+ + K +YT D +GS Y++ G+G+ + + LD
Sbjct: 86 MSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDP 143
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q K P+ +++ EA+DL K +A+ RD +GD L+I+V+ KDG E+
Sbjct: 144 QFK-PN------------MTKDEAIDLAKRAVRAASLRDSASGDGLDILVITKDGTE-EF 189
Query: 184 MELRK 188
E K
Sbjct: 190 TEAIK 194
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+ ++AD+ M ++G D + L + + +Y + ++MS A
Sbjct: 35 TMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARWVQVECSLYNIRRGREMSVGASA 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPF 120
LLSN L R PYY ++GG+D+ G +Y+ DA+G + GSGS
Sbjct: 95 SLLSNILNNNRMMPYYVQLLVGGVDSGGP-SIYSVDALGGASPEDDIVATGSGSPFAYGV 153
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ + P E + VDL SA RD +G+ + +VV+ KD +
Sbjct: 154 LEDRFEKGMP-------------EKDCVDLAIRALRSAMRRDSASGEDISVVVITKDK-Y 199
Query: 181 REYME 185
E+ME
Sbjct: 200 EEFME 204
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 13/177 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G I+S+ K+ K+ D +A +G AD++A+ K+L A Y +++S A+
Sbjct: 28 VSYGGFIISKTARKVYKITDYLGLALAGLFADLQAISKILRAEIEYYNIVTGRRISVRAV 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LL+ LY +++P+ S ++GGL+ +G +Y D +GS Y++ GSG+ + +
Sbjct: 88 ARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPLGSLIEDDYAAIGSGAPIAIGI 147
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+N +S +A L +A ERD +GD ++++V+ ++
Sbjct: 148 LENGYSK-------------DMSVDDAKKLAIAAVRAAIERDAMSGDGIDLLVIRRE 191
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 19/187 (10%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I S+ K+ ++AD+ M ++G D + L ++++ +YQ + + +S A L
Sbjct: 32 GSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLARIMSVECNLYQIRRGRSISVGASSTL 91
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLD 122
LSN L R +PYY ++GG+D G VY+ DA+G R + GSGS + L+
Sbjct: 92 LSNYLNQNRGYPYYVQLLVGGVDATGP-SVYSVDAMGGATRESDIVATGSGSPMAYGVLE 150
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
++ K L+E EA++L +A RD +G+ + +V++ KD
Sbjct: 151 DRYKK-------------DLTEDEAIELAIRALRAAMRRDSASGEGIHVVIITKDA---- 193
Query: 183 YMELRKD 189
Y EL ++
Sbjct: 194 YSELSEE 200
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G I+S+ K+ K+ D+ +A +G AD++AL ++L+A Y+ K A
Sbjct: 29 VSYGGFIVSKAGKKVFKVTDRIGIAFAGLYADMQALARILSAEIQYYEVSTGKPARVYAA 88
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLSN LY + P+ + ++GG+D G +Y D VGS Y++ GSG+ + +
Sbjct: 89 AKLLSNILYASKLIPFITEVLVGGVDETGS-HLYVMDPVGSVIEDDYAALGSGAAIAIGI 147
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DG 178
L+ + +S EA +L + A ERD +GD ++I+V+ + DG
Sbjct: 148 LEANYRK-------------DMSIDEAKELAEKAVRIAIERDAISGDGIDILVIKRVDG 193
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 15/175 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S++ K ++ A +G AD++ L ++A I + + + ++ ++
Sbjct: 26 GNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQISALAKIRKMDLKRDIPPNSVAKM 85
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +RFFP + ++GG+ G+ +YT D++GS Y++ G+G+ + + LD
Sbjct: 86 MSNMMYERRFFPLLTQVIVGGV--VGEPAIYTLDSLGSVLPDEYAAVGTGAEMALGVLDP 143
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
Q KS +SE +AVDL SA RD ++GD L+I+ L+ +G
Sbjct: 144 QFKS-------------GMSEKDAVDLAVRGIRSAALRDSFSGDGLDILALDANG 185
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + + A +G AD++ L ++A I + + +++ + ++
Sbjct: 31 GNFVVSKTTKKTFVITPQVGAACAGLVADMQILSLQISALAKIRKMEIKREVPPNTIAKM 90
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +RFFP + ++GGL + K +YT D +GS Y++ G+G+ + + LD
Sbjct: 91 MSNMMYERRFFPLLTQVIVGGLVD--KPVIYTLDPLGSVLPDDYAAVGTGAEMALGILDQ 148
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
Q K L+E EA DL +A RD +GD ++++V+NK G
Sbjct: 149 QYKK-------------ELNETEATDLAVKSIRAAILRDSASGDNIDVLVINKYG 190
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GY I ++ KI ++A + + ++G D + L +L+ +Y+ + K++S A
Sbjct: 31 TMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARLMTVEANLYEIRRGKRISVQAAS 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPF 120
LLSN L+ R FP+Y ++GG+D G +++ DAVG + G + GSGS +
Sbjct: 91 TLLSNILHGNRMFPFYVQLLIGGVDETGP-VLFSVDAVGGTGKEDGIVATGSGSPMAYGV 149
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ + E A++L SA +RD +G+ + +VV+ +D H
Sbjct: 150 LEDRY-------------TLGMDERSAIELAIRALRSAIKRDAGSGEGVAVVVITEDSYH 196
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I+ + KI+K++D M ++G AD + L +L Y+ H K+MS A
Sbjct: 34 TAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQVLADVLRMEVKNYELFHKKRMSVKAAA 93
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LSN L+ RF+PY ++GG D + +Y+ D G+ + GSGS + + +
Sbjct: 94 TFLSNVLHSARFYPYIVQLLVGGFDTAPR--LYSLDWFGTVAEEEFLVTGSGSPMAVGVI 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + P D E V+L +AT RD +G+ +++ V++++GI
Sbjct: 152 EAEYN-------PNMDL------EELVNLAVRAVFAATRRDTASGEGIDVAVIDRNGITM 198
Query: 182 EYMEL 186
+ L
Sbjct: 199 RHYRL 203
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 16/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + +++ +KI K+ + +A +G D+ L +LL A +Y Q K+MS A+
Sbjct: 31 SLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L R PY ++ ++GG D + + +Y+ D +G Y + GSG L
Sbjct: 91 TLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVDMMGGITEDKYVAAGSGMEFAYSVL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D++ + L E + + SA +RD+++GD + +V + ++G +R
Sbjct: 149 DSEYRE-------------DLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEG-YR 194
Query: 182 E 182
E
Sbjct: 195 E 195
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I S+ K+ ++ D M ++G D + L +L++ +Y+ + N+ M+ +
Sbjct: 30 TMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L+SN L R++P ++GG+D G +Y+ D + GS E S+ GSGS +
Sbjct: 90 TLMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDPMGGSIEETRISATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++Q + ++ E +DL +AT+RD +G+ +++VV+ K+
Sbjct: 149 LEDQYRE-------------DIAVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFK 195
Query: 181 R 181
R
Sbjct: 196 R 196
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI K+ + M ++G D + L +++ +Y+ + + MS A
Sbjct: 32 TMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRIIQVECSLYEMRRGRTMSVGAAS 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPF 120
LLSN L R++PYY ++GG D EG VY+ DA+G R + GSGS
Sbjct: 92 TLLSNYLNQNRYYPYYVQLLMGGFD-EGGPSVYSVDAMGGATREEEIVATGSGSPFAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L++Q + ++E EA DL SA RD +G+ + +VV+ KD
Sbjct: 151 LEDQYRP-------------DMTEEEAKDLAIRAVRSAMRRDAGSGENIMVVVIMKD 194
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 15/184 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G ++S+ K + K +G AD++ L +AA I + + + + + ++
Sbjct: 30 GNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKM 89
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+SN +Y +R+FP + ++GG+ + K +YT D +GS Y++ G+G+ + + LD
Sbjct: 90 MSNMMYERRYFPLLTQVIVGGVVD--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDP 147
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
Q K P+ +++ EA+DL K +A+ RD +GD ++++V+ KDG
Sbjct: 148 QFK-PN------------MTKDEAIDLAKRAVRAASLRDSASGDGVDVLVITKDGTEEFT 194
Query: 184 MELR 187
E++
Sbjct: 195 EEIK 198
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + DK +AS+G AD+++L +++ Y+ + K+ + +M
Sbjct: 28 VSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIVKINAKAYELETRKKPTVRSM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +R+ P+++ ++GG+D EG + D +GS Y++ G+G+ L +
Sbjct: 88 AKLLSVIMFSRRYMPFFAEVLVGGVDEEGNHLI-VMDPLGSLIEDNYAALGTGAKLAISV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + L QDA L +A ERD +G +++V++++ G
Sbjct: 147 LDTGYREDITL----QDAKK---------LAVKALKAAIERDPVSGGGIDLVLIDQTGAK 193
Query: 181 REYMELR 187
E ++++
Sbjct: 194 EEEVKVQ 200
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
+ KII + D+ + ++G DV+ + ++L A YQ + M+ AM LLSN L
Sbjct: 36 NIRKIIPITDRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANLLSNILNE 95
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 130
++FPY ++GG +E + D +G Y++ GSG+ + L+ +
Sbjct: 96 NKWFPYLVQIIIGGYVDE--PTIANLDPLGGLIFDDYTATGSGTPFAIAILEEGYRK--- 150
Query: 131 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMEL 186
L +A +L +A RD+YTG K+++V + KDG+ E++ L
Sbjct: 151 ----------NLGIEKAKELAIKAVKAAGARDVYTGSKKIQVVTITKDGMKEEFVTL 197
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ LS K+ + DK +AS+G AD+++L +++ Y+ + K+ + +M
Sbjct: 28 VSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIVKINAKAYELETRKKPTVRSM 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS ++ +R+ P+++ ++GG+D EG + D +GS Y++ G+G+ L +
Sbjct: 88 AKLLSVIMFSRRYMPFFAEVLVGGVDEEGSHLI-VMDPLGSLIEDNYAALGTGAKLAISV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD + L QDA L +A ERD +G +++V++++ G
Sbjct: 147 LDTGYREDITL----QDAKK---------LAVKALKAAIERDPVSGGGIDLVLIDQTGAK 193
Query: 181 REYMELR 187
E ++++
Sbjct: 194 EEEVKVQ 200
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+ ++AD+ M ++G D + L ++L +YQ + ++ ++ A
Sbjct: 32 TMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQLARILNVECNLYQIRRSRPITVGATA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L R+FPYY ++GG+D +G VY+ DA+ G+ + + GSGS +
Sbjct: 92 TLLSNYLNQNRYFPYYVQLLVGGVDEKGP-SVYSVDAMGGATKEEEIVATGSGSPMAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+++ K P ++E A+++ SA +RD +G+ + +V + KD
Sbjct: 151 LEDRYK-------PG------MTEEMAIEIAVRGLKSAMKRDAGSGEGIHVVAITKD 194
>gi|397613757|gb|EJK62406.1| hypothetical protein THAOC_16986 [Thalassiosira oceanica]
Length = 363
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 86/205 (41%), Gaps = 45/205 (21%)
Query: 23 VMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV 81
++ S+G AD +AL++ + + + M ++ LL LY +R FP+YSF V
Sbjct: 153 MVGSAGCAADCEALKRQMRLEVSALECSLRSGPMHVQSIANLLQQVLYSRRSFPFYSFCV 212
Query: 82 LGGLDNEG-----KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP-------- 128
+ G+ + G Y YDA+GSYERV +S G+G L+ P LD P
Sbjct: 213 VAGIGRDAHGDALSGYAYVYDAIGSYERVAVASSGTGRELMQPVLDRLFSEPCDGSDNSC 272
Query: 129 ---------------SPLLL---------------PAQDAVTPLSEAEAVDLVKTCFASA 158
P+ + P Q V+ S AV V T F S
Sbjct: 273 EQVRDGVSLVEGVGRDPMAISAGEQRVGAAGGLRPPVQTTVS-CSWQTAVKHVATAFQSV 331
Query: 159 TERDIYTGDKLEIVVLNKDGIHREY 183
ER+I GD + + V+ +G + Y
Sbjct: 332 AEREISVGDDVVVCVMRSNGSTQTY 356
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 20/187 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+ ++AD+ M +G D + L +L+ ++ + + ++ A
Sbjct: 32 TMGNMIASKKAKKVYQIADRIGMTIAGGVGDAQQLARLMQVECSLFNIRRGRPIAVGAAA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY---ERVGYSSQGSGSTLIM 118
LLSN L R FPYY ++GG+D G +Y+ DA+G +R+ + GSGS
Sbjct: 92 TLLSNVLNQNRMFPYYVQLLVGGIDRYGP-SIYSVDALGGASPEDRI--VATGSGSPFAY 148
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+++ + +SE E +DL SA +RD +G+ + IVV+ KD
Sbjct: 149 GVLEDRFEE-------------GMSEKECLDLAIRALRSAMKRDSASGEDISIVVITKDK 195
Query: 179 IHREYME 185
+ E ME
Sbjct: 196 -YEELME 201
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SRD KI KL D M +G D + L ++L +++ + + MS A+
Sbjct: 29 TMGTFIASRDAQKIYKLTDNIAMTIAGSVGDGQRLARILQVEAKLFELRRHGPMSINALS 88
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPF 120
LLSN L ++ P+Y ++GG+D G +Y+ D +G E V +SS GSGS +
Sbjct: 89 MLLSNILAETKYMPFYVQVLIGGVDKSGP-RIYSLDPLGGRIEEVKFSSTGSGSPIAYGV 147
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+++ K +S + V+L SA +RD +G+ ++ V+ +
Sbjct: 148 LEDRYKP-------------DISVEQGVELAAKALESAMKRDSASGNGMQFAVITHE 191
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LSR K+ K+ + +A +G D++ L +L+ Y+ +NK +S A
Sbjct: 25 LSYGGFVLSRSAKKVFKIG-RFGIAGAGIMGDIQTLTRLMNVEIKYYEMYNNKPISVKAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY ++ P+ S + GG+D+EG ++ D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSVILYQYKWTPFISELLFGGVDDEGP-KLFVLDPIGSLIEDNYAAVGSGARVAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ PS ++ + ++V +A ERD+ +GD ++I+ + +D
Sbjct: 143 LESEY-DPS------------MNLDKGKEIVLKALKAAIERDVTSGDGIDILTIKRDNTS 189
Query: 181 RE 182
E
Sbjct: 190 SE 191
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 14/184 (7%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G+++ SR K+ K+ D +AS G AD++ L K+ A +Y + S + +L
Sbjct: 32 GFTMFSRSGKKVFKVNDNIGIASIGILADMQVLTKIAKAYMSLYALDTKTRPSIRSAAKL 91
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS L+ R PY+ ++GG+D+EG ++ D++GS Y++ G+G+ L + L++
Sbjct: 92 LSYVLFANRVLPYFVEVLVGGVDDEGP-HLFIMDSLGSLIEDDYAAVGTGTKLAIAILES 150
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
K PS ++ EA +L + RD +GD ++I+ + +G E
Sbjct: 151 NYK-PS------------MTVKEARELAIKAINQSISRDPVSGDGIDILTITGNGSAEET 197
Query: 184 MELR 187
+ L+
Sbjct: 198 IPLQ 201
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 19/186 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SR KI ++AD+ M ++G D + L +L+ +Y+ + ++ + A+
Sbjct: 32 TIGNYIASRRAKKIYQVADRVAMTTAGSVGDAQFLARLVKVEASLYETRKEEKPTVKAIA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
+LSN L R+FPY+ ++GG+D G +++ D + G+ E + GSGS
Sbjct: 92 TMLSNLLNSSRYFPYFVQLLIGGVDKRGP-SMFSIDPIGGAIEETDIVATGSGSPTAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ ++ E V+L SA +RD +GD +++V + KD
Sbjct: 151 LEDRY-------------YPEITTQEGVELAIRAITSAMKRDSASGDGIDVVKITKD--- 194
Query: 181 REYMEL 186
EY++L
Sbjct: 195 -EYVQL 199
>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
Length = 204
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 14/186 (7%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y +S D K+ K+ DK + SG D + L + L RH +Y+ + + M G +L
Sbjct: 32 YQTISCDTPKVFKIHDKLYLGLSGLLTDAQTLHQKLLFRHNLYKLREERDMKPSTFGHML 91
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
SN LY +RF PY++ V+ GL+ +G + D +G+ E G
Sbjct: 92 SNALYERRFGPYFAAPVVAGLEPDGTPYLSGMDTIGAIETAKDFMIGG------------ 139
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
SP L + P E E + + V C S +RD G I V+ KD +
Sbjct: 140 -TSPESLYGMCESMWRPDMEPEELFETVAQCLMSGFDRDALAGWGAVIHVITKDKVITRT 198
Query: 184 MELRKD 189
++ R D
Sbjct: 199 LKTRMD 204
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ +S ++ K+ ++ DKC + SG D + L + L RH +Y+ + + M+ + L+
Sbjct: 29 HQTVSNNHPKVYRINDKCFIGISGLVTDAQTLYQKLVFRHNLYKLREERDMTPQVLSNLV 88
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
N LY KRF PY++ V+ GLD + K + D +G+ S FL
Sbjct: 89 GNMLYEKRFGPYFTEPVICGLDTQDKPFISGMDLIGA------------SVYTEDFLLVG 136
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+P+ L ++E E + V C S+ ERD +G E+ ++ +++ +
Sbjct: 137 TMTPAMYGLCETLYKKDMNEDELFETVSQCMLSSIERDAMSGWGAEVTIITPAKTYKKKL 196
Query: 185 ELRKD 189
R+D
Sbjct: 197 LARQD 201
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KII + D+ + ++G DV+ + ++L A Y + M+ AM LLSN L ++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMIARILEAEARYYYFAWGRPMTTKAMANLLSNILNENKW 98
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG +E + D G Y++ GSG+ + L+ K
Sbjct: 99 FPYLVQIIIGGYVDE--PTIANLDPYGGLIFDNYTATGSGTPFAIAILEEGYKE------ 150
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYMEL 186
L EA +L +A RD+YTG K+++V + K+G+ E+++L
Sbjct: 151 -------NLGIEEAKELAIKAIKAAGSRDVYTGSKKVQVVTITKEGMQEEFIKL 197
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI ++ + + ++G D + L ++L +++ + K MS A
Sbjct: 32 TMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLVRILQVECNLFEMRRGKTMSVGAAS 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L R++PYY ++GG D+EG VY+ DA+ G+ + + GSGS
Sbjct: 92 TLLSNYLNQNRYYPYYVQLLMGGFDDEGP-SVYSVDAMGGATKEEDIVATGSGSPFAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++Q ++ + E +A DL SA RD +G+ + +VV+ KD +
Sbjct: 151 LEDQYRA-------------GMKEDDAKDLAVRAVRSAMRRDSASGEDIMVVVITKDK-Y 196
Query: 181 REYME 185
E++E
Sbjct: 197 EEHIE 201
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KII + D+ + ++G DV+ L + L A Y + M+ AM LLSN L R+
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMLARYLEAEARYYYFTWGRPMTTKAMANLLSNILNENRW 98
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG +E + D G Y++ GSG+ + L+ +
Sbjct: 99 FPYLVQIIIGGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYRE------ 150
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYM 184
L+ EA +L +A RD+YTG K+++V + KDG+ E++
Sbjct: 151 -------DLTIEEAKELAIRAVRAAGRRDVYTGSKKVQVVTITKDGMKEEFV 195
>gi|357016905|gb|AET50481.1| hypothetical protein [Eimeria tenella]
Length = 236
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S GYSI SR +SKI +L +C +ASSG QAD+ L KLL AR +Y+H H + S PA+
Sbjct: 56 LSVGYSIHSRHHSKITQLTSRCCIASSGMQADINTLHKLLKARVAVYRHLHRAEPSGPAL 115
Query: 61 GQLLSNTLYYKRFFPYYSF 79
QLLS+ LY +RFFP F
Sbjct: 116 SQLLSSLLYSRRFFPLLHF 134
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G+ LS K+ + D+ +AS+G AD++ + K+L +Y+ + ++ S AM +L
Sbjct: 31 GFYSLSSSGKKVYVVNDRMALASAGVIADMQTIAKILRVNAKMYELESRRKPSIAAMAKL 90
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS ++ +R P+ + ++GG D EG ++ D VGS Y++ G+G+ + + LD
Sbjct: 91 LSVIMFNRRIMPFIAEVLVGGYDEEGP-HIFVLDPVGSLIEDDYAALGTGAKMAISILDA 149
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
++D + A++ ++ +A ERD +G +++V + DG+ E
Sbjct: 150 NY---------SKDVDVSGARKLAINAIR----AALERDPVSGGGIDLVTVTADGVSEEE 196
Query: 184 MEL 186
+++
Sbjct: 197 IKV 199
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G+ LS K+ + D+ +AS+G AD++ L K+L +Y+ ++ S AM +L
Sbjct: 31 GFYSLSSSGKKVFIVNDRMAIASAGVIADMQTLAKILRVNAKMYELDAKRKPSVAAMAKL 90
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS ++ +R+ P+ + ++GG D EG V+ D VGS Y++ G+G+ + + LD+
Sbjct: 91 LSIIMFNRRWMPFIAEVLVGGYDEEGP-HVFVLDPVGSLIEDDYAALGTGAKMAIGILDS 149
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
K + EA L +A ERD +G +++V++
Sbjct: 150 GYKK-------------DIDVVEARKLAINAIRAALERDPVSGGGIDLVIIT 188
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SR KI K+ D+ M ++G D + L +L+ +Y + ++ + A+
Sbjct: 30 TMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLARLIKVETNLYTIRKEEEPTVKAVA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L+SN L R+FPY ++GG+D G +Y+ D + G+ E + + GSGS +
Sbjct: 90 TLVSNLLNSVRYFPYLVQLLIGGVDKTG-AKIYSIDPIGGAIEEIDIVATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L++ + ++ EAV+L SA +RD +GD +++V +
Sbjct: 149 LEDNYRK-------------DINVDEAVELAIRAIYSAMKRDSASGDGIDVVKIT----E 191
Query: 181 REYMEL 186
+EY+EL
Sbjct: 192 KEYVEL 197
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KII + D+ + ++G DV+ L ++L YQ + MS AM LLSN L ++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQMLARILEVEARYYQFTWGRPMSTRAMANLLSNILNENKW 98
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY V+GG E + D +G Y++ GSGS + L++ +
Sbjct: 99 FPYLVQIVIGGYVEE--PVIANLDPLGGLIFDDYTATGSGSPFAIAVLEDGYRK------ 150
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYME 185
+ EA +L A +RD+YTG K+++V + K+G+ + E
Sbjct: 151 -------DMGIEEAKELAVKAVKVAGKRDVYTGSRKVQVVTITKEGMREYWFE 196
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SRD KI ++ D M +G D + L ++L +++ + + MS A+
Sbjct: 30 TMGNFIASRDAQKIYRITDNAAMTIAGSVGDGQRLARILQVEAKLFELRRHGSMSINALS 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPF 120
LLSN L R+ PYY ++GGLD G +Y+ D +G E + S GSGS +
Sbjct: 90 MLLSNILAEMRYAPYYVQVLIGGLDKAGPK-IYSLDPLGGRIEEEKFVSTGSGSPIAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+++ K P +S E V+L SA +RD +G+ ++ V+ +
Sbjct: 149 LEDRYK-------PG------MSVEEGVELAARALESAMKRDSASGNGMQFCVITAE 192
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + ++ K+ K+ D + +G D +A+ +LL A +Y+ + K +S A
Sbjct: 27 SMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLLTAEAKLYKMRTGKNISPLACA 86
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R+FP+ + ++GG D +++ D +G E +++ GSGS +
Sbjct: 87 TLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ P+ E + L SA ERD Y+G+ + + V+ K+G+
Sbjct: 147 LEAGYDRDMPV-------------EEGIKLALKALKSAMERDTYSGNGISLAVITKEGVK 193
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 16/190 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY +S D+ K+I+ + K +M SG D+ L L+ + +Y + +++ A+
Sbjct: 29 SNGYRTISTDFDKVIRPSSKTLMGFSGLATDIHTLTNLIKFKTNLYHLREEREIGVKALS 88
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPF 120
+ ++ LY KRF PY+ ++ GLDN + YD +G ++ G+
Sbjct: 89 HMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYDLIGCLSVCSEFAISGTA------- 141
Query: 121 LDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
DNQL + P L E +++V C S +RD ++G ++ +L + +
Sbjct: 142 -DNQLFG------ICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGCKVYLLTPEKL 194
Query: 180 HREYMELRKD 189
+ ++ R D
Sbjct: 195 VTKTLKSRMD 204
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI ++AD+ M ++G D + L +++ +Y+ + ++ + A+
Sbjct: 32 TMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L SN L R+FPY ++GG+D+EGK +Y+ D + G+ E + GSGS
Sbjct: 92 TLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIYSIDPIGGAIEEKDIVATGSGSLTAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L +D TP + EAV+L SA +RD +GD +++V + +D
Sbjct: 151 L--------------EDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITED 194
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+++G+ + R K++ LA + +G AD + L L+ A YQ + MS PA+
Sbjct: 36 VTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAV 95
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+L S+ ++ R+FP+Y+ +L G+DNEG +Y D GS + GSGS +
Sbjct: 96 ARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIATGSGSPVAYGV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +D + AV+L ++A RD +GD +++ + KD
Sbjct: 155 LEPNYR---------ED----MDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKD--- 198
Query: 181 REYMELRKD 189
+ Y EL D
Sbjct: 199 KGYGELSLD 207
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI ++AD+ M ++G D + L +++ +Y+ + ++ + A+
Sbjct: 21 TMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIA 80
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
L SN L R+FPY ++GG+D+EGK +Y+ D + G+ E + GSGS
Sbjct: 81 TLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIYSIDPIGGAIEEKDIVATGSGSLTAYGV 139
Query: 121 LDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L +D TP + EAV+L SA +RD +GD +++V + +D
Sbjct: 140 L--------------EDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITED 183
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 17/189 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+++G+ + R K++ LA + +G AD + L L+ A YQ + MS PA+
Sbjct: 33 VTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAV 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+L S+ ++ R+FP+Y+ +L G+DNEG +Y D GS + GSGS +
Sbjct: 93 ARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIATGSGSPVAYGV 151
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +D + AV+L ++A RD +GD +++ + KD
Sbjct: 152 LEPNYR---------ED----MDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKD--- 195
Query: 181 REYMELRKD 189
+ Y EL D
Sbjct: 196 KGYGELSLD 204
>gi|195421055|ref|XP_002060834.1| GK20619 [Drosophila willistoni]
gi|194156919|gb|EDW71820.1| GK20619 [Drosophila willistoni]
Length = 229
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 22/185 (11%)
Query: 10 RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-AMGQLLSNTL 68
R SK+ ++ + V+ S G D AL L+ + L Y+ N CP ++ +L+ T
Sbjct: 58 RSQSKLFDVSPQTVLGSVGCWCDTLALLSLVRSYSLKYELD-NLMPVCPDSLASMLTRTK 116
Query: 69 YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD------ 122
+ ++ Y+ +V+ G+D+ G G VY D G+Y R+ Y G+G +I+P LD
Sbjct: 117 FTRQ---YFVSSVVAGIDSNGLGAVYFNDPSGNYLRLPYHISGTGGRIILPTLDWFEGNE 173
Query: 123 -NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+Q+ + T L+ +AV++ F +A +RDI+ G+ + I ++ ++G+
Sbjct: 174 EDQMNA----------ITTSLTVDKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQF 223
Query: 182 EYMEL 186
+ + L
Sbjct: 224 KQLPL 228
>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 199
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ + SG AD++ L +L+ + Y+ +H + + +
Sbjct: 21 VTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLNILSIQAREYRSEHGRPIPIKTL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
S L+Y R F Y +++GG D+EG +Y D +GSY Y + GSGS M
Sbjct: 81 VNYASLVLFYSRPFIYLVHSIIGGYDDEGP-QLYMLDWLGSYSSERYIATGSGSPYAMGV 139
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +S EA+ + + +A D +G+ ++IVV+ K+G
Sbjct: 140 LEVNYRD-------------DISIDEAIKVAENAVKAAMRNDPGSGEGIDIVVITKEGFR 186
Query: 181 R 181
R
Sbjct: 187 R 187
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SR KI+KL D M SG AD +AL + Y+ K++S M
Sbjct: 40 TAGTLIASRTVKKIVKLTDYAAMTISGLVADAQALADAVREEARYYELDRGKRLSVYGMA 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L ++FPY ++GG D +Y D G +S GSGS + + L
Sbjct: 100 TLLANILSSSKYFPYLVQLIVGGYDTAPH--LYAIDPYGGVTEEKVTSTGSGSPVALGVL 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ K +S +AV+L SA RD TGD +++ ++ +
Sbjct: 158 ERGYKE-------------GISLDDAVNLAAEAIRSAILRDSATGDGIDVTIIGRSTYQE 204
Query: 182 EYM 184
+++
Sbjct: 205 KFI 207
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I ++ K+ K+ D M +G D +A+ + L A +Y+ + K +S A
Sbjct: 27 SMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRALIAEARLYKMRTGKNISPRACA 86
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R FP+ + ++GG D +++ D +G E ++S GSGS +
Sbjct: 87 TLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPLGGMNEEKTFTSTGSGSPIAYGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +S E + L SA ERD Y+G+ + + V+ K+G+
Sbjct: 147 LEAEYDR-------------DMSIEEGLKLALKALKSAMERDTYSGNGVSVAVITKEGVK 193
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ D SG AD+++L L R Y+ ++ + + A+
Sbjct: 21 VTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLTLRAREYKIEYKRPIPIRAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D E +Y D +G+ R Y + GSGS P+
Sbjct: 81 VNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLGTVTRERYIATGSGS----PY 136
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +D AVDL +A D +G+ +++VV+ K+G
Sbjct: 137 AKGALEVGYREDMSLED---------AVDLAIRSVKAAIRNDPGSGEGIDVVVITKEGFR 187
Query: 181 REYMELRK 188
R + +K
Sbjct: 188 RVFTAQQK 195
>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
gi|302595865|sp|B5IEE5.1|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
Length = 210
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
K+ KL M ++G D++ L + + A +Y+ + M A LLSN L ++F
Sbjct: 40 KLYKLDYNIGMTTAGLVGDLQVLVRYMRAEINLYRIRRKMYMPVGAAATLLSNILNERKF 99
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPYY ++GG D++G V+ DA G Y+S GSGS + L+++ K
Sbjct: 100 FPYYVGLLVGGFDSKGY-HVFAIDAAGGAIEDKYASVGSGSLFVYGVLEDRWKD------ 152
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
LS E ++LV +A RD +GD + + + KD
Sbjct: 153 -------DLSLDEGINLVIRGINAAMRRDAASGDGISVATITKD 189
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 17/189 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+++G+ + R K+ LA + +G AD + L L+ A YQ + MS PA+
Sbjct: 33 VTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAV 92
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+L S+ ++ R+FP+Y+ +L G+DNEG +Y D GS + GSGS +
Sbjct: 93 ARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIATGSGSPVAYGV 151
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +D + AV+L ++A RD +GD +++ + KD
Sbjct: 152 LEPNYR---------ED----MDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKD--- 195
Query: 181 REYMELRKD 189
+ Y EL D
Sbjct: 196 KGYGELSLD 204
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D ++L ++++A IY+ + M +
Sbjct: 34 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLVRMISAETKIYKMRTGNNMPPHSCA 93
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R FP+ + ++GG DN +++ D VG E ++S GSGS +
Sbjct: 94 TLLSNILHGNRHFPFLTQLIIGGYDNLHGPKLFSLDPVGGLNEETSFTSTGSGSPTALGV 153
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + K ++ + +L SA ERD Y+G+ + + V++++G+
Sbjct: 154 LEAEYKK-------------DMTINKGKELAVKALISAMERDAYSGNGISLAVIDENGV 199
>gi|345801204|ref|XP_003434786.1| PREDICTED: proteasome subunit beta type-1-like [Canis lupus
familiaris]
Length = 112
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 89 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 148
G VY++ VGSY+R + + GS S ++ LDNQ+ + + + V LS A+
Sbjct: 9 GNMAVYSFGPVGSYQRDSFKAGGSASAMLQLLLDNQVGFKN---MQNVEHVL-LSLDRAM 64
Query: 149 DLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
LVK F SA ERD+YTGD L I ++ K+GI E + LRKD
Sbjct: 65 RLVKDVFISAAERDVYTGDVLRICIVTKEGIREETVPLRKD 105
>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
Length = 204
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D K+ K+ DK + SG Q D L + L RH +Y+ + + M G +LSN
Sbjct: 35 MTCDTPKVYKIHDKLYLGLSGLQTDATTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNA 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY +RF PY++ V+ GL+ +G + D +G+ E + G+
Sbjct: 95 LYERRFGPYFAAPVVAGLEPDGTPYLCGMDTIGAIESAKDFMITGT-------------- 140
Query: 127 SPSPLLLPAQDAVTPLSEA-EAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
SP L + P E E + V C S +RD G + V+ KD + ++
Sbjct: 141 SPESLYGMCESMWRPDMEPDELFETVAQCLMSGCDRDALAGWGAVVHVITKDKVVSRTLK 200
Query: 186 LRKD 189
R D
Sbjct: 201 TRMD 204
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ K+ K+ K +MA +G D++ L +++ Y+ K +S A
Sbjct: 25 LSYGGYVLSKQAKKVHKIG-KFLMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY + P+ S + GG+D +G +Y D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSLIEDNYAAVGSGARIAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+++ L + AQ L+ ++ ERDI +GD +++ +++K G
Sbjct: 143 LESEYDPNMNLDIAAQ-------------LITKAIKASIERDITSGDGIDLAIMDKKG 187
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 99/187 (52%), Gaps = 15/187 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +++++ K + D A +G AD++ L + + A I + + + ++ ++
Sbjct: 28 VSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQVEALAKIRKLETRRDVAPNSI 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+L+S ++ +R+FP + ++GG++ K +YT D +GS Y++ G+G+ + +
Sbjct: 88 AKLMSVIMFERRYFPLLTQVIVGGINT--KPEIYTLDPLGSVLPDDYAAVGTGAEMALGI 145
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+D + K P+ ++E +A +L SA +RD +GD ++++V+++ G
Sbjct: 146 MDAEFK-PN------------MTEEKAKELAVRAIRSAIQRDAASGDGIDVLVVSRTGHR 192
Query: 181 REYMELR 187
E + +R
Sbjct: 193 EETIPIR 199
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I S + K+ K+ + M +G D + L ++L ++ IY+ KQMS + LLS
Sbjct: 38 IASTEARKVWKIDENLGMTIAGLVGDAQELIRILKIQNEIYKMNERKQMSPRSAATLLSI 97
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQL 125
L + P+Y ++GG++ +GKG VY DA G Y + +++ GSGS + +L++
Sbjct: 98 ILQENKMMPFYVQLIVGGVE-DGKGYVYNLDAAGGYTQESRFTATGSGSLTALGYLEDSY 156
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
K P L+ +A+ + A +RD TG+ + I + G + EY +
Sbjct: 157 K-------PG------LTTKDAIKIAAKALLIAMQRDSATGNNMTIAAITSRG-YEEYTQ 202
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
+I +L+ C++ +G Q DV + + + +Y Q ++++ A +++S+ LY RF
Sbjct: 43 RIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRF 102
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLL 132
PY+ ++ G + +GK + D +G + + G+ S ++ + +K
Sbjct: 103 GPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCEAHIKP----- 157
Query: 133 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+SE E + L++ SAT RD Y+G +VVL +DG
Sbjct: 158 --------DMSEEEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
ILS+ K+ + ++ ++++G D + L +L +Y+ ++ K + + +LLS
Sbjct: 29 ILSKSARKVFLINERVGVSTAGLPGDFQELVDVLKYNITMYELENEKAATPTNVAKLLSI 88
Query: 67 TLYYKRFFP-YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
LY RF YY+ V+GG+DN G ++ D G +S+ GSG+ + L+
Sbjct: 89 LLYQGRFSGIYYAELVVGGIDNSGP-KIFVLDPAGGLMEENFSAVGSGAQIATGILERFF 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
K +SE EAV+L + A RD +GD ++++++ G E++
Sbjct: 148 KEG-------------MSEKEAVELAERAMREAISRDALSGDGIDLLIITSKGSRMEFIP 194
Query: 186 LR 187
+R
Sbjct: 195 VR 196
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
+I +L+ C++ +G Q DV + + + +Y Q ++++ A +++S+ LY RF
Sbjct: 43 RIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRF 102
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLL 132
PY+ ++ G + +GK + D +G + + G+ S ++ + +K
Sbjct: 103 GPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP----- 157
Query: 133 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+SE E + L++ SAT RD Y+G +VVL +DG
Sbjct: 158 --------DMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
+I +L+ C++ +G Q DV + + + +Y Q ++++ A +++S+ LY RF
Sbjct: 43 RIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRF 102
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLL 132
PY+ ++ G + +GK + D +G + + G+ S ++ + +K
Sbjct: 103 GPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP----- 157
Query: 133 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+SE E + L++ SAT RD Y+G +VVL +DG
Sbjct: 158 --------DMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195
>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
Length = 202
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 16/190 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + D+ K+I+ + K +M SG D+ L L+ + +Y + +++ A+
Sbjct: 27 SNGYRTIGTDFDKVIRPSSKTLMGFSGLATDIHTLTNLIKFKTNLYHLREEREIGVKALS 86
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPF 120
+ ++ LY KRF PY+ ++ GLDN + YD +G ++ G+
Sbjct: 87 HMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYDLIGCLSVCSEFAISGTA------- 139
Query: 121 LDNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
DNQL + P L E +++V C S +RD ++G ++ +L + +
Sbjct: 140 -DNQLFG------ICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGCKVYLLTPEKL 192
Query: 180 HREYMELRKD 189
+ ++ R D
Sbjct: 193 VTKTLKSRMD 202
>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 205
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y S ++ K+ ++ C+ +G +DV+ + + + +Y+ + + +
Sbjct: 34 YQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEKVKYHANLYRLREGHDIGPEQLLNST 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
++ LY KRF PYY ++ G+D+ G V +YD +GS E G+GS +M D+
Sbjct: 94 AHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIGSPEISQVGCVGTGSNELMGMCDSF 153
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
K + + P E V+ V C +A RD ++G +E+ +L +D + M
Sbjct: 154 YK----------EGMEP---EELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNM 200
Query: 185 ELRKD 189
+ R+D
Sbjct: 201 KPRQD 205
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ Y ++ D+ K+ K+ D+ ++ +G DV+ L +LL R +Y+ + ++M+
Sbjct: 28 LGISYQTVAMDFKKVFKMNDRLMVGLAGLATDVQTLDQLLRFRMNLYELREEREMTPEVF 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
L+SN LY KRF PY+ V+ GLD +GK + T D +G+
Sbjct: 88 TNLMSNMLYEKRFGPYFCEPVIAGLDPKGKPFLGTMDLIGA 128
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I ++ KI K+ D + +G D ++L + L A +Y+ + K MS A
Sbjct: 26 SLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLVRYLTAEAKLYRMRTGKLMSPLACT 85
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R+FP+ ++GG D +G +Y+ D +G E +++ GSGS +
Sbjct: 86 TLLSNILHSSRYFPFLVQMIVGGFDEKGFK-LYSLDPLGGVNEEKDFTATGSGSPIAYGV 144
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ K + + V LV +A ERD ++G+ + + ++ KDG+
Sbjct: 145 LEAGYKK-------------DMDYKKGVSLVLKALQAAMERDTFSGNGVSLALITKDGVK 191
>gi|374327726|ref|YP_005085926.1| proteasome beta subunit [Pyrobaculum sp. 1860]
gi|356642995|gb|AET33674.1| proteasome beta subunit [Pyrobaculum sp. 1860]
Length = 201
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ D SG AD++++ L R Y+ +H K + A+
Sbjct: 21 VTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTLRAREYRMEHKKPIPISAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D EG +Y D +G+ R Y + GSGS P+
Sbjct: 81 VNYMSLILFYSRPYVYIVHSIIGGVD-EGGAALYMIDWLGTVTRERYIATGSGS----PY 135
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDGI 179
L+ +D +S EA+DL +A D +G+ +++VV+ K+G
Sbjct: 136 AKGALEVGY-----RED----MSLEEAIDLAIKSVKAAIRNDPGSGEGIDVVVITKKEGF 186
Query: 180 HREYMELRK 188
R + +K
Sbjct: 187 RRVFTTQQK 195
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
MS G ILSR++ KI + D+ +A +G D+ L +++ + + + K + +
Sbjct: 25 MSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNV 84
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ LS+ LY +FFP+ ++GG+D G+ +Y D +GS Y + G+G+T
Sbjct: 85 AKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLGSIIEEDYVAAGTGATTAFGL 144
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L++ K L + AV L + A RD TGD ++++VL G
Sbjct: 145 LEHVYKRGMSLEEAKKAAVEALRASMA-------------RDAGTGDGIDVLVLPVSG 189
>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
Length = 205
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 13/185 (7%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y S ++ K+ ++ C+ +G +DV+ + + + +Y+ + + +
Sbjct: 34 YQFASANFHKVFQVNKYCLFGGAGLFSDVQTMAEKVKYHANLYRLREGHDIGPEQLLNST 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
++ LY KRF PYY ++ G+D+ G V +YD +GS E G+GS +M D+
Sbjct: 94 AHMLYKKRFQPYYMSPIIAGIDDNGNSYVCSYDYIGSPEISRVGCVGTGSNELMGMCDSF 153
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
K + + P E V+ V C +A RD ++G +E+ +L +D + M
Sbjct: 154 YK----------EGMEP---EELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNM 200
Query: 185 ELRKD 189
+ R+D
Sbjct: 201 KPRQD 205
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 16/172 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KII + D+ + ++G DV+ L ++L A Y + MS AM LLSN L ++
Sbjct: 39 KIIPITDRIAITTAGSVGDVQVLARILEAEARYYYFTWGRPMSTKAMANLLSNILNEHKW 98
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPY ++GG +E + D G Y++ GSG+ + L+ +
Sbjct: 99 FPYLVQIIIGGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYRK------ 150
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIHREYM 184
L +A +L +A +RD+YTG K+++V + K+G+ E++
Sbjct: 151 -------NLGIEKAKELAIKAVRAAGKRDVYTGSKKVQVVTITKEGMKEEFV 195
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I S+ KI + D+ M ++G D +AL +++ +Y+ + N+ M+ + L
Sbjct: 33 GSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRIMTVELQLYKIRRNEPMTVKGISTL 92
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLD 122
LSN + +R++PY ++GG+D +G +YT D G+ E ++ GSGS + L+
Sbjct: 93 LSNVMNGQRYYPYIVQLLIGGIDRDG-AHLYTIDPFGGNTEESEIAATGSGSPIAYGVLE 151
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
N+ +S + L SA +RD +G+ +E+V + KD
Sbjct: 152 NKYTK-------------DISLEKGTALAIQALYSAIKRDSASGEAIEVVTITKD 193
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ K+ K+ +K +MA +G D++ L +++ Y+ K +S A
Sbjct: 25 LSYGGYVLSKQAKKVYKI-NKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY + P+ S + GG+D +G +Y D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSLIEDNYAAVGSGARIAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+++ L + Q L+ ++ ERDI +GD +++ +++K G
Sbjct: 143 LESEYDPNMSLDVATQ-------------LITKAIKASIERDITSGDGIDLAIIDKKG 187
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
+I +L+ C++ +G Q DV + + + +Y Q ++++ A +++S+ LY RF
Sbjct: 43 RIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRF 102
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLL 132
PY+ ++ G + +GK + D +G + + G+ S ++ + +K
Sbjct: 103 GPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP----- 157
Query: 133 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+SE E + L++ SAT RD Y+G +V+L +DG
Sbjct: 158 --------DMSEDEILPLMEQIIRSATNRDAYSGWGAHVVILRRDG 195
>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 204
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
M Y +S D+ KI ++ +K + +G +DV+ L +LL R +Y+ + ++M+
Sbjct: 28 MGISYQTVSMDFKKIFQMNEKLFVGLAGLASDVQTLDQLLRFRMNLYELREEREMTPKVF 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
LLSN LY KRF PY++ V+ GLD K + T D +G+
Sbjct: 88 TNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYLATMDLIGA 128
>gi|302774543|ref|XP_002970688.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
gi|300161399|gb|EFJ28014.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
Length = 239
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 18/184 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPA 59
+TG + +R KI KL D + SG AD + + + R+L++QH +Q + A
Sbjct: 38 TTGIYVANRASDKISKLTDNVYICRSGSAADTQVISDYV--RYLLHQHTIVLGEQATVKA 95
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+L+ Y + F ++GG D KG ++ G+ RV ++ GSGST I
Sbjct: 96 AAKLVREIAYSNKSFLEAGM-IVGGWDKHEKGSIFGVPIGGTLLRVPFTIGGSGSTYIFG 154
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
FLD + P +S+ EA DLV + A RD +G + V ++ +G+
Sbjct: 155 FLDQAWR-------PG------MSKQEAQDLVVKAVSLAMARDGGSGGVVRTVTISSEGV 201
Query: 180 HREY 183
R+Y
Sbjct: 202 TRDY 205
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L + L A +Y+ + + MS A+
Sbjct: 68 SMGYMVSSKDVQKVEQIHPTAALTIAGSVSAAQSLIRSLKAETSLYETRRGQDMSMQALA 127
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL+N L FF +LGG+D EG VY+ DA+G Y+ GSGS + L
Sbjct: 128 TLLANFLRSGAFFVVQP--ILGGVDEEGP-HVYSMDALGGMSEENYTVTGSGSQYALGVL 184
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + LS EA + SA ERD+ +G+ + + V+ +G+
Sbjct: 185 EQHYEE-------------DLSIEEAKTVAAKAIQSAVERDLASGNGINVAVVTDEGV 229
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI K+ D +G +D ++L K + A +++ ++ K+++ A L SN L+ R
Sbjct: 42 KIFKIDDHIGTTIAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHSSRG 101
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
+P+Y +LGG+D++G +Y+ D G + S GSGS + L+++
Sbjct: 102 YPFYVQTLLGGVDDKGP-ALYSLDPTGGVIKDLVISTGSGSPVAYGVLEDRY-------- 152
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+QD L E +D+ SA ERD Y+G+ + + + ++G R
Sbjct: 153 -SQD----LYVEEGIDVAIRAIKSAMERDTYSGNSILVATITEEGFKR 195
>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595851|sp|A4YJ04.1|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 196
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ K+ ++ + + +G D++AL +++ A Y+ +N+ +S A
Sbjct: 25 LSYGGYVLSKSAKKVFPIS-RFGIGGAGLFGDLQALTRIMNANIKYYELYNNRPISTRAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY ++ P+ S + GG+DN G+ +Y D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSIILYQYKYMPFISEVLFGGVDN-GEPQLYVLDPLGSLLDDIYAAVGSGARVAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-I 179
L+ + L+ + +L ++ ERD+ +GD ++I+ ++KDG I
Sbjct: 143 LEAEYSE-------------KLTLTQGRELTIKSLRASAERDVTSGDGIDILTISKDGKI 189
Query: 180 HREYM 184
+ E++
Sbjct: 190 NTEFL 194
>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
Length = 209
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
D+ KI ++ + +A SG +D+ L+ +H +Y+ + N+ M ++S TLY
Sbjct: 43 DFQKIFQIHPRLFLAMSGLASDMHTLKATFEFKHKLYELRENRVMEPKTFASVVSTTLYE 102
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPS 129
KRF PYY V+ GLD K + D +G+ + G+ S + ++ K
Sbjct: 103 KRFGPYYVEPVIAGLDKASKPYITGMDLIGAAAPTENFVVAGNNSESLFGVCESMYKE-- 160
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
L E +++ C S + RD +G + V+ KDG+ + ++ R D
Sbjct: 161 -----------NLEPEELFEVISQCLLSGSGRDCLSGWGGTVYVITKDGVEVKSVKGRMD 209
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + ++ K+ K+ D M +G D +A+ +LL A +Y+ + + + A
Sbjct: 27 SLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACA 86
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R FP+ + ++GG D +++ D +G E +++ GSGS +
Sbjct: 87 TLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ +S E + L SA ERD ++G+ + + V+ KDG+
Sbjct: 147 LEAGYDR-------------DMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + ++ K+ K+ D M +G D +A+ +LL A +Y+ + + + A
Sbjct: 22 SLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACA 81
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R FP+ + ++GG D +++ D +G E +++ GSGS +
Sbjct: 82 TLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGV 141
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ +S E + L SA ERD ++G+ + + V+ KDG+
Sbjct: 142 LEAGYDR-------------DMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 188
>gi|302771876|ref|XP_002969356.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
gi|300162832|gb|EFJ29444.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
Length = 239
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPA 59
+TG + +R KI KL D + SG AD + + + R+L++QH +Q + A
Sbjct: 38 TTGIYVANRASDKISKLTDNVYICRSGSAADTQVISDYV--RYLLHQHTIVLGEQATVKA 95
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+L+ Y + F ++GG D KG ++ G+ RV ++ GSGST I
Sbjct: 96 AAKLVREIAYSNKSFLEAGM-IVGGWDKHEKGSIFGVPIGGTLLRVPFTIGGSGSTYIFG 154
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
FLD + P +S+ EA DLV + A RD +G + V ++ G+
Sbjct: 155 FLDQAWR-------PG------MSKQEAQDLVVKAVSLAMARDGGSGGVVRTVTISSAGV 201
Query: 180 HREY 183
R+Y
Sbjct: 202 TRDY 205
>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 209
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ GY I + KI+K+ D M +SG AD + L ++L Y+ ++ S A
Sbjct: 39 TAGYYIAHKKTRKIVKITDYMAMTTSGLVADAQVLAEILREELRYYELTTKRKPSVAAAA 98
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L+ ++ R +PY +LGG D + ++ D +G+ Y++ GSGS + + +
Sbjct: 99 NMLAAIIFSARMYPYIVQLLLGGYDTAPR--LFNIDWLGTVTEEKYTATGSGSPIAIGVI 156
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IH 180
++ + + EAV+L +A ERD+ TG+ +++V++ K I
Sbjct: 157 ESGYRE-------------DMKVDEAVELAVKAVRAAMERDVATGNGIDVVIIGKGTFIT 203
Query: 181 REY 183
REY
Sbjct: 204 REY 206
>gi|432328820|ref|YP_007246964.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
gi|432135529|gb|AGB04798.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
Length = 225
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
K+ +L M ++G D++ L + + A +Y+ + M A LLSN L ++F
Sbjct: 55 KLYRLDYNIGMTTAGLVGDLQVLVRYMRAEINLYRIRRKMYMPVGAAATLLSNILNERKF 114
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
FPYY ++GG D+ G VY DA G Y+S GSGS + L+++ L
Sbjct: 115 FPYYVGLLVGGFDDRGY-HVYAIDAAGGAIEDKYASVGSGSLFVYGVLEDRWHDDIGL-- 171
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
E ++LV +A RD +GD + + + K+ R ++EL
Sbjct: 172 -----------DEGIELVIRGINAAMRRDAASGDGISVATITKE---RGFVEL 210
>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
Length = 192
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
++ + D+ K+ K+ +KC SSG D++++ K L + I++ + + + ++G ++
Sbjct: 20 FTTIGNDFPKVFKINNKCFFGSSGLATDIQSILKELKFKIKIFELEQERDIGIQSLGHVV 79
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDN 123
+N LY +RF P++ ++ GLD++ + + +YD +G+ + + GS S + ++
Sbjct: 80 ANMLYSRRFGPWFISPIVAGLDDKNRPFISSYDLIGAPSDSDDFVVSGSCSDQLFGICES 139
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREY 183
S ++E E + C + +RD +G + V+ I +
Sbjct: 140 LHHS-------------GMNEDELFETTSQCLLAGLDRDCLSGWGAVVHVITPKKIITKT 186
Query: 184 MELRKD 189
++ R D
Sbjct: 187 IQTRMD 192
>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 196
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 16/185 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ K+ +A + + +G D++AL +++ A Y+ +N+ +S A
Sbjct: 25 LSYGGYVLSKSAKKVFPIA-RFGIGGAGLFGDLQALTRIMNANIKYYELYNNRPISTKAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY ++ P+ S + GG+D +G+ +Y D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSIILYQYKYMPFISEVLFGGVD-DGQPQLYVLDPLGSLLDDVYAAVGSGARVSIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-I 179
L+ + L+ + +L ++ ERD+ +GD ++I+ +++DG I
Sbjct: 143 LEAEYNESMTLM-------------QGKELTIKSLRASAERDVTSGDGIDILTISRDGKI 189
Query: 180 HREYM 184
+ E++
Sbjct: 190 NTEFL 194
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
L+ ++ KI + DK ++ +G DV L ++ ++ +Y+ + +++ L+S+T
Sbjct: 36 LANNFEKIFTINDKVMLGLTGLATDVTTLNEVFRFKNNLYELREERKIEPQTFANLVSST 95
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY+ V+ GL+ E K + +D +G + + G+ S + ++ L
Sbjct: 96 LYEKRFGPYFCGPVVAGLNKENKPFICGFDLIGCIDFAKDFIVSGTASEQLYGMCES-LY 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P+ L A D +S+A +A +RD +G + V+ KD + + ++
Sbjct: 155 EPN---LEADDLFETISQA---------LLNAADRDTMSGWGAVVYVVTKDSVTKRVLKT 202
Query: 187 RKD 189
R+D
Sbjct: 203 RQD 205
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SRD KI +L D M +G D + L ++L A +++ + + MS A+
Sbjct: 29 TMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRLARMLQAESKLFELRRHGPMSINALS 88
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLSN L+ R F Y ++GG+D G A G V +SS GSGS L L
Sbjct: 89 MLLSNLLWEYRIF--YIQVLVGGVDKSGPKLFSLDPAGGRITEVKFSSTGSGSPLAYGVL 146
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
+++ K QD +S + V+L SA +RD +G+ ++ V+
Sbjct: 147 EDRYK---------QD----MSVEQGVELAAKALESAMKRDSASGNGMQFCVI 186
>gi|195421053|ref|XP_002060833.1| GK20618 [Drosophila willistoni]
gi|194156918|gb|EDW71819.1| GK20618 [Drosophila willistoni]
Length = 173
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 10 RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-AMGQLLSNTL 68
R SK+ ++ + V+ S G D AL L+ + L Y+ N CP ++ +L+ T
Sbjct: 2 RSQSKLFDVSPQTVLGSVGCWCDTLALLSLVRSYSLKYELD-NLMPVCPDSLASMLTRT- 59
Query: 69 YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD------ 122
K Y+ +V+ G+D+ G G VY G+Y R+ Y G+G +I+P LD
Sbjct: 60 --KFTLQYFVSSVVAGIDSNGLGAVYFNHPSGNYLRLPYHISGTGGRIILPTLDWFEGNE 117
Query: 123 -NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+Q+ + T L+ +AV++ F +A +RDI+ G+ + I ++ ++G+
Sbjct: 118 EDQMNA----------ITTSLTVDKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQF 167
Query: 182 EYMEL 186
+ + L
Sbjct: 168 KQLPL 172
>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 199
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ + SG AD++ L L Y+ +H + + +
Sbjct: 21 VTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLSTLTILARDYKTEHRRPIPVKTL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
S L+Y R Y ++ GG D+EG +Y D +GSY Y S GSGS M
Sbjct: 81 VNYASLLLFYSRPVIYIVHSIFGGFDDEGP-QLYMLDWLGSYSEERYISTGSGSPYAMGV 139
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + ++ EAV L + +A D +G+ ++IV + KDG
Sbjct: 140 LEVGYRE-------------DMTVDEAVKLAENAVKAAMRNDPGSGEGIDIVTITKDGFR 186
Query: 181 REY 183
R +
Sbjct: 187 RVF 189
>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
Length = 203
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
DYSK+ K+ DK + +G AD L + L +H +Y+ + N+ MS ++S TLY
Sbjct: 37 DYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFKHDMYELRENRVMSPKVFASVVSTTLYE 96
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
KRF PYY+ V+ GLD +GK + + D +G+
Sbjct: 97 KRFQPYYTEPVVAGLDKDGKPYITSMDLIGA 127
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I S+ KI ++ D M ++G D + + ++++ +++ + + ++ +
Sbjct: 30 TMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRIISVESKLFKMRRQESITIKGIT 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L +R++P ++GG+D G +Y+ DA+ G+ E S GSGS +
Sbjct: 90 TLLSNMLSGQRYYPLMVQLLIGGVDKNGP-AIYSLDALGGNIEETRAVSTGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ ++ E VDL +A +RD +G+ +++VV+ KD
Sbjct: 149 LEDRYTE-------------DMTVVEGVDLAIRALHNAMKRDSASGENIDVVVITKDKYE 195
Query: 181 R 181
R
Sbjct: 196 R 196
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 15/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI ++ D+ M ++G D + + ++++ +++ + N+ ++ +
Sbjct: 31 TMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQIVRIISVESKLFKMRRNEPITIKGIT 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPF 120
LLSN L +R+FP ++GG+D G +Y+ D +G E + GSGS +
Sbjct: 91 TLLSNLLSGQRYFPLMVQLIVGGVDKTGPN-MYSLDPLGGRIEETNIVATGSGSPITYGL 149
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+++ ++ E +L +A +RD +GD +++VV+ KDG
Sbjct: 150 LEDRYHK-------------DMTSDEGAELAIRALHNAMKRDSASGDGIDVVVITKDG 194
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G + +++ K+ ++ DK +G + ++L +L A +Y+ ++ K MS A+ L
Sbjct: 32 GSLVANKNADKLFQIDDKIGATIAGTVSHAQSLMDILKAEISLYKLRNEKDMSIDALAVL 91
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
SN L + PYY +L G+D +G +YT D GSY ++S GSGS L++
Sbjct: 92 TSNILKSR---PYYVQTILAGVDKDG-AKLYTLDPSGSYIPDTFTSTGSGSPYAFGVLED 147
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ ++ E + SA ERD+Y+G+ + V+ KDG+
Sbjct: 148 RYNED-------------ITTEEGKKIAIKAITSAMERDVYSGNNYRLGVITKDGMK 191
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
DYSK+ K+ D+ + +G AD L + L +H +Y+ + N+ MS G ++S TLY
Sbjct: 39 DYSKLHKIHDRLYLGLTGLIADQLTLAQKLKFKHDMYELRENRVMSPKVFGAVVSATLYE 98
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
KRF PYY+ V+ GLD +GK + + D +G+
Sbjct: 99 KRFSPYYTEPVVAGLDADGKPYITSMDLIGA 129
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 VATDFQRIYKIHDKLFVGLSGLGTDAQTLYQRLVFRHKMYQLREERDMKPETFANLVSAV 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY+ V+ GLD++ K + T D +G+ E + GS S + + K
Sbjct: 95 LYEKRFGPYFCQPVIAGLDDDDKPFICTMDFIGAKELAKDFVVAGSASESLYGACEAFFK 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P + P E ++V ++ +RD +G I ++ D I + ++
Sbjct: 155 ---PDMEP----------DELFEVVSQALLASVDRDCLSGWGGHIYIVTPDDIKEKILKG 201
Query: 187 RKD 189
R D
Sbjct: 202 RMD 204
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY ++S+ K+ K+++ A +G AD++ + K + A +Y+ + + S + ++
Sbjct: 32 GYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEVTAVVNLYRLEQGVEPSVKTVAKI 91
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS L+ R+FPY+ ++GG+D++G V D +GS Y+ G+G+ + + ++N
Sbjct: 92 LSWNLFGNRYFPYFMETIVGGIDSQGP-HVIVLDPLGSMIEDDYAVVGTGAEVAVGVIEN 150
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHRE 182
+ +S E DL ++ RD +G+ +++++ + G+ E
Sbjct: 151 LYRK-------------DMSATEIRDLATKAIKASIARDAGSGNGIDLLLYTQKGLEAE 196
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ST + + ++ K+ D+C+M SG DV+ L+ + +Y+ + ++M
Sbjct: 28 LSTQLMTVDTSFQRVFKVTDQCLMGVSGLGTDVQTFNSLMKFKLNMYRLKEGREMKSETF 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGL----DNEGKGCVYTYDAVGSYERVG-YSSQGSGST 115
+L++ +LY KRF PY+ V+ GL D E K + TYD++G G + G+G+
Sbjct: 88 SKLVATSLYEKRFGPYFVSPVVAGLDKISDTEYKPVICTYDSIGYRSNNGEFEVAGTGAE 147
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
L+ + + P L P E ++ SA +RD +G ++ +L
Sbjct: 148 LLYGVCETFYR---PNLEP----------EELFQVISNSLLSALDRDSLSGWGSKVYILT 194
Query: 176 KDGIHREYMELRKD 189
+ ++ R+D
Sbjct: 195 PTELIVRSLKTRQD 208
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + ++ K+ K+ D M +G D +A+ +LL A +Y+ + + + A
Sbjct: 27 SLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLTAEAKLYKMRTGRNIPPLACA 86
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R FP+ + ++GG D +++ D +G E +++ GSGS +
Sbjct: 87 TLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ +S E + L SA ERD ++G+ + + V+ K+G+
Sbjct: 147 LEAGYDR-------------EMSVEEGIKLAINALKSAMERDTFSGNGISLAVITKEGVK 193
>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
Length = 204
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S ++ +S +++KI K+ D + SG D+++L +LL R +YQ + +M+
Sbjct: 17 SNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETEMNIDCFS 76
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+LSN LY RF PY+ F V +D G + +Y+ +G + +
Sbjct: 77 NMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYLNAYDLIGAKCETN--- 133
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
F+ N + + + + E + V C SA +RD +G E+ VL
Sbjct: 134 ---DFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLSGWGAEVYVLT 190
Query: 176 KDGIHREYMELRKD 189
D I ++ ++ R D
Sbjct: 191 PDKIIKKKLKARMD 204
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
DSM 13514]
Length = 202
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + K+ K+ D SG AD++ + L R Y+ Q + + A+
Sbjct: 21 VTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIRAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D E +Y D +G+ + Y + GSGS
Sbjct: 81 VNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSPYAKGV 140
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGI 179
L+ + L+ EAVDL +A D +G+ +++V + K DG
Sbjct: 141 LEVGYRG-------------DLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTITKRDGF 187
Query: 180 HREYMELRK 188
R + +K
Sbjct: 188 KRIFTTQQK 196
>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
Length = 204
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S ++ +S +++KI K+ D + SG D+++L +LL R +YQ + M+
Sbjct: 17 SNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETDMNIDCFS 76
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+LSN LY RF PY+ F V +D G + +Y+ +G + S
Sbjct: 77 NMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTNVYEPYLNAYDLIGAKCETS--- 133
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
F+ N + + + + E + V C SA +RD +G E+ VL
Sbjct: 134 ---DFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLSGWGAEVYVLT 190
Query: 176 KDGIHREYMELRKD 189
D I ++ ++ R D
Sbjct: 191 PDKIIKKKLKARMD 204
>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
Length = 204
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK +A SG D + L + L RH +YQ + + M L+S
Sbjct: 35 VATDFQRIFKVHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL +E K + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKE 130
>gi|118345684|ref|XP_976672.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288089|gb|EAR86077.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 289
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 2 STGYSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLL-AARHLIYQHQHNKQMSCP 58
S Y +SR ++ K+ D C ASSG +D + L +L+ + Y + +
Sbjct: 93 SISYGGMSRYNHIQRVHKITDNCAFASSGEFSDFQELSRLIDEMTNQTYLNDDKINYTPR 152
Query: 59 AMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTL 116
G +S Y+ R P Y +NV+GG+DN GK + D G+Y + S G G+ L
Sbjct: 153 DYGNYISQLQYHHRNKMNPLYLWNVIGGVDN-GKPYLAHIDLYGTYIETNHVSTGFGNYL 211
Query: 117 IMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
P + ++ +SE EA LV TCF + RD + +++ V++K
Sbjct: 212 CGPLFEKGWRAD-------------MSEQEAKQLVNTCFQALFYRDARAHETIQVTVIDK 258
Query: 177 DGIHRE 182
+G+ E
Sbjct: 259 NGVRIE 264
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+LS K+ + + +G DV L+++L Y+ QH +++ + ++LS
Sbjct: 31 VLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLEMEAKYYELQHGREIRVRGLAKMLSV 90
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY + P + V+GG D+ G +Y D VGS Y++ GSG+ L + +++
Sbjct: 91 ILYSYKLAPMLTEIVVGGYDDNGP-QLYILDPVGSLIEEKYAALGSGAQLALGYIE---- 145
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P + L EAE LV + ERD+ +GD ++I+ + G
Sbjct: 146 -------PRYNPDISLEEAE--KLVVEAVKTVIERDVLSGDGVDILKITAKG 188
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+ + DK M +G D + L +++ +Y+ + +++S A
Sbjct: 32 TMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRIINVECNLYEIRRGQKISVGAAA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPF 120
+LSN L RF PYY ++GG+D G VY+ DA G + S GSGS
Sbjct: 92 TILSNYLNQNRFSPYYVQLLVGGVDTSGP-SVYSVDAAGGATLEENFVSTGSGSLTAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L+++ K P+ ++E EA++L +A RD +G+ +V++ ++
Sbjct: 151 LEDRFK-PN------------MTEEEAIELAVRALRAAMLRDSASGEGYNVVIITQE 194
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G + ++ KI++L + + +G AD + L + A Y + +N+ MS +M
Sbjct: 52 TAGLYVAHKNVKKIVRLTENSAITIAGLVADAQTLADYIRAEAYYYYYINNRPMSIRSMA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL L ++FP+ +LGG D +++ D G Y++ GSGS + + +
Sbjct: 112 SLLGLILNEYKYFPFIVQLILGGYDYYEGAKLFSIDYFGDVTEERYTATGSGSPIAIGVI 171
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKDGIH 180
++ + +S +AV LV A+A+ RD+++G +++VV+ KD +
Sbjct: 172 ESGYRP-------------EMSIDDAVSLVVKAVATASMRDVFSGGIGVDVVVIGKD-FY 217
Query: 181 REYM----ELRK 188
RE E+RK
Sbjct: 218 REMTFQGEEIRK 229
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I S+ KI ++ D M ++G D + + ++++ +Y+ + + M+ +
Sbjct: 30 TMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRVMSVESHLYKMRRKEPMTIKGIT 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L +R++P ++GG+D G +++ DA+ G+ E + GSGS +
Sbjct: 90 TLLSNILSGQRYYPLMVQLLVGGVDKNGP-AIFSLDALGGTIEETKAVATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ V LS E V+L +A +RD +G+ +++VV+ D
Sbjct: 149 LEDRF-------------VDGLSIEEGVELAIRALHNAMKRDSASGNGIDVVVITADKFD 195
Query: 181 R 181
R
Sbjct: 196 R 196
>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 206
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 30/191 (15%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ ++ K K+ D C A+SG D++ L+ + + +YQ + KQM+ + ++
Sbjct: 37 VGSNFPKAFKVTDNCFFAASGLATDIQTLKDEIMFKVNMYQMRGEKQMNVKTLSNMVGTM 96
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS------YERVGYSSQ---GSGSTLIM 118
LY KRF P++ +V+ GLD++ + + +D VG+ + VG S+ G L
Sbjct: 97 LYSKRFGPWFVDSVIAGLDSKNEPYITCFDLVGAPCTPTDFVVVGTCSEQLYGVCEALFR 156
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P L+ E + + C + +RD +G E+ V+ D
Sbjct: 157 P---------------------GLNADELFETISQCLMAGIDRDCLSGWGAEVHVITPDK 195
Query: 179 IHREYMELRKD 189
+ ++ R D
Sbjct: 196 VVSRSLKTRMD 206
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
++ +S + K+ +++DKC + SG D + L + L RH +Y+ + + MS + L+
Sbjct: 32 HTTVSTNNPKVYRISDKCFIGISGLVTDAQTLYQKLVFRHNLYKLKEERDMSPQVLTNLV 91
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
SN LY KRF PY++ V+ GLD+ K + D +G+
Sbjct: 92 SNMLYEKRFGPYFTEPVICGLDSNNKPFISGMDLIGA 128
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D ++L +L++A IY+ + M+ +
Sbjct: 35 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCT 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
L+SN L+ R +P + +LGG D +++ D VG E +++ GSGS
Sbjct: 95 TLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+++ KS + AV LS SA +RD Y+G+ + + +NKDG+
Sbjct: 155 LESEYKSDIAIEKGLLIAVKALS-------------SAMQRDAYSGNGISLAHINKDGV 200
>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
Length = 204
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ KI ++ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQKIYRIHDKLFLGLSGLGTDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL +E K + T D++G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKE 130
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D+ + SG D + L + L RH +YQ + + M+ L+S
Sbjct: 35 IATDFQRIYKIHDRLFLGLSGLATDAQTLYQRLVFRHKLYQLREERDMNPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY+ V+ GL +E K + T D++G+ E + G+ S + ++ K
Sbjct: 95 LYEKRFGPYFCQPVIAGLSDENKPFICTMDSIGAKELARDFVVAGTASESLYGACESMFK 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
L E +++ S+ +RD +G + V+ + ++
Sbjct: 155 P-------------DLEAEELTEIISQALLSSVDRDCLSGWGGHVYVVTPTEVTERILKG 201
Query: 187 RKD 189
R D
Sbjct: 202 RMD 204
>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
Length = 204
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
L+ DY K+ K+ D+ + +G D + L + A +H +Y+ + + + A GQL+S T
Sbjct: 35 LATDYKKVYKIHDQLFIGLAGLGTDAETLSQRFAFKHNLYKLREERDIKPSAFGQLVSAT 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY +RF PY+ V+ GL+ +G + D++G+ E + G+ + ++ ++ +
Sbjct: 95 LYERRFGPYFCQPVIAGLEPDGSPYLCGMDSIGAQETAKDFMVAGTATDSLLGICESLWR 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P L P ++ LS+A S +RD G + V+ KD + ++
Sbjct: 155 ---PDLGP-EELFETLSQA---------LLSGQDRDCLAGWGAVVYVITKDKVIARTLKG 201
Query: 187 RKD 189
R D
Sbjct: 202 RMD 204
>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
Length = 204
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S+
Sbjct: 35 IATDFQRISKIHDKLFIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSSI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL +E K + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAKE 130
>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
Length = 233
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 34 STGMYVANRASDKITQLTDNVYLCRSGSAADSQVVSDYV--RYFL--HQHIIQLGQPATV 89
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N L GG D G +Y+ G+ ++ ++ GSGS+
Sbjct: 90 KVTANLI---RLLSYNNKNTLETGLIVGGWDKYEGGSIYSVPLGGTMLQLPFAIGGSGSS 146
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ FLD K +S+ EA LV C + A RD +G + VV+N
Sbjct: 147 YLYGFLDQAWKDG-------------MSKEEAEALVVKCVSLAIARDGASGGVVRTVVIN 193
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 194 SEGVTRNF 201
>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
Length = 204
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S ++ +S +++KI K+ D + SG D+++L +LL R +YQ + M+
Sbjct: 17 SNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETDMNIDCFS 76
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+LSN LY RF PY+ F V +D G + +Y+ +G + +
Sbjct: 77 NMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKINVYEPYLNAYDLIGAKCETN--- 133
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
F+ N + + + + E + V C SA +RD +G E+ VL
Sbjct: 134 ---DFVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDCLSGWGAEVYVLT 190
Query: 176 KDGIHREYMELRKD 189
D I ++ ++ R D
Sbjct: 191 PDKIIKKKLKARMD 204
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ D SG AD++++ L+ R Y+ +H + + A+
Sbjct: 21 VTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLSLRAREYRVEHKRPIPIRAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D E +Y D +G+ + Y + GSGS P+
Sbjct: 81 VNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLGTVTKEKYIATGSGS----PY 136
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGI 179
L+ + +D L+ EAV+L +A D +G+ +++V + K DG
Sbjct: 137 AKGALE-----VAYRED----LTIDEAVELAIRAVKAAIRNDPGSGEGIDVVTITKSDGF 187
Query: 180 HREYMELRK 188
R + +K
Sbjct: 188 RRVFTTQQK 196
>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
Length = 206
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 30/191 (15%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ K K+ + C A+SG DV+ L++ + + +Y+ + +K+MS + ++
Sbjct: 37 VSSNFPKAFKVTESCFFAASGLATDVQTLKEEIMFKVNMYKLRGDKEMSVKTLSNMVGAM 96
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS------YERVGYSSQ---GSGSTLIM 118
LY +RF P++ +V+ GLDN+ + +D VG+ + G S+ G L
Sbjct: 97 LYSRRFGPWFVDSVIAGLDNDSSPYITCFDLVGAPCTPSDFVVAGTCSEQLYGVCEALFK 156
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P +D P L + V C + +RD +G E+ V+ D
Sbjct: 157 PGMD-----PEQLF----------------ETVSQCLMAGIDRDCLSGWGAEVHVITPDR 195
Query: 179 IHREYMELRKD 189
+ ++ R D
Sbjct: 196 VISRSLKTRMD 206
>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ + ++ D+ +I K+ DK + SG DV+ + + L RH +YQ + + M
Sbjct: 28 LGVNFQTIACDFQRIFKIHDKLYIGLSGLATDVQTMHQRLQFRHKLYQLREERNMRPETF 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
L+S LY KRF PY+ ++ GL+++G + T D +G+
Sbjct: 88 ASLVSAILYEKRFGPYFCEPIIAGLNDDGTPFICTTDLIGA 128
>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
gi|255625639|gb|ACU13164.1| unknown [Glycine max]
Length = 204
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK +A SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL +E K + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDEDKPFICTMDCLGAKE 130
>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 201
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ D SG AD++++ L R Y+ ++ + + A+
Sbjct: 21 VTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFLTLRAREYKMEYKRPIPIRAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D+E +Y D +G+ + Y + GSGS P+
Sbjct: 81 VNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLGTVTKERYIATGSGS----PY 136
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGI 179
L+ + +D AVDL +A D +G+ +++VV+ K +G
Sbjct: 137 AKGALEVGYREDMSLED---------AVDLAIKAVKAAIRNDPGSGEGIDVVVITKREGF 187
Query: 180 HREYMELRK 188
R + +K
Sbjct: 188 RRVFTAQQK 196
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 91/185 (49%), Gaps = 15/185 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G+ I S+ KI ++ D M ++G D + + ++++ +Y+ + + M+ +
Sbjct: 30 TMGHLIASKTAKKIYQIDDFAAMTTAGSVGDAQQIVRIISVESKLYKMRRKESMTIKGLT 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
+LSN L +R++P ++GG D G +Y+ DA+ G+ + + GSGS +
Sbjct: 90 TMLSNLLSGQRYYPLMVQLLVGGYDKHGP-ELYSIDALGGNIDEKRVVATGSGSPIAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ K ++ E V+L +A +RD +GD +++V++ KD
Sbjct: 149 LEDRYKE-------------NMTTQEGVELAVRALHNAMKRDSASGDGIDVVIITKDQFT 195
Query: 181 REYME 185
R +E
Sbjct: 196 RLELE 200
>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 VATDFQRIYKIHDKVFVGLSGLGTDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY+ V+ GL ++ K + T D +G+ E + GS S + + K
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDDKPFICTMDFIGAKELAKDFVVAGSASESLYGACEALFK 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P + P E ++V ++ +RD +G I ++ D I + ++
Sbjct: 155 ---PDMEP----------EELFEVVSQALLASVDRDCLSGWGGHIYIVTPDEIREKILKG 201
Query: 187 RKD 189
R D
Sbjct: 202 RMD 204
>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
Length = 204
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG DV+ L + A RH +YQ + + M L+S
Sbjct: 35 IATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + K + T D++G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGEDDKPFICTMDSIGAKE 130
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
L+ ++ KI + +K + +G DV+ L +L + +Y+ + +Q+ L+S+T
Sbjct: 35 LTNNFPKIFSMTEKTYLGLTGLATDVQTLHELFRYKINMYKLREERQIEPKTFANLVSST 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY++F ++ GL + + +D++G + ++ G+ S + ++ L
Sbjct: 95 LYEKRFAPYFTFPIVAGLSKTNEPFICGFDSIGCIDFAKDFAVSGTASDHLYGICED-LY 153
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P L +D +S+A +A +RD +G + V++KD + ++
Sbjct: 154 EPD---LEPEDLFETISQA---------LLNAIDRDCISGWGCVVYVISKDKCMKRLVKG 201
Query: 187 RKD 189
R+D
Sbjct: 202 RQD 204
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ D + +G AD + L +L ++ Q N+ + ++
Sbjct: 31 SAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDILRYHANVHAVQKNENIPIKSLA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + +LGG D +G ++ D GS E+ Y + GSGS + L
Sbjct: 91 RLCSLVFHQNRGYPFIADILLGGYDRDGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGVL 149
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+++ + D +T L +A+ + L +A R+I TGD + I +NK+G
Sbjct: 150 EDEYR----------DDLT-LEDAKLIAL--RAVKAAIVRNIGTGDGINIAAINKNGFQL 196
Query: 182 EYMELRK 188
E +K
Sbjct: 197 LTKEQKK 203
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L + + A +Y+ + + MS A+
Sbjct: 70 SLGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLIRSIRAEVRLYESRRGENMSMTALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL N L F Y +LGG+D +G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLLGNFLRSGAF--YVVQPILGGVDEDGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI-- 179
+ + DA LS EA + SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEYN----------DA---LSIDEAKTVAARAVKSAVERDLASGNGINICVVTEDGVEI 233
Query: 180 --HREYMEL 186
H+++ E+
Sbjct: 234 TQHKDFEEV 242
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I + KI ++ D + ++G AD + + L+ A +Y+ +HN+ +S A+ +
Sbjct: 33 GNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLMRAEARLYELRHNRMISARALANM 92
Query: 64 LSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+S+ L+ K F PY ++GG N+ +Y D GS Y++ GSGS L
Sbjct: 93 ISHVLHSSLKAFRPYLVQLIVGGF-NDDDPALYNLDPSGSIIEEDYTATGSGSPTAYGVL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + + +S +A+++ SA ERD TG+ + +V + ++ +R
Sbjct: 152 EAEYEE-------------GMSLDDAIEVAVRAVKSALERDTGTGEGVTVVTITREEGYR 198
Query: 182 EYME 185
E E
Sbjct: 199 ELPE 202
>gi|332796484|ref|YP_004457984.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332694219|gb|AEE93686.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 196
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ +K + + + +A +G D++AL +++ A Y+ + K +S A
Sbjct: 25 LSYGGYVLSKS-AKKVHIIGRFGIAGAGLFGDLQALTRIMNAEIKYYELYNEKPISTKAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY ++ P+ S + G+DN G +Y D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSIILYQYKYMPFISEILFAGVDN-GIPQLYVLDPLGSLLDDVYAAVGSGARVAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-I 179
L+ + D PL + + + +K+ AS ERD+ +GD ++I++L+K G
Sbjct: 143 LEAE-----------YDQNMPLDKGKEI-AIKSIKAS-IERDVTSGDGIDILILDKTGKT 189
Query: 180 HREYM 184
+ EY+
Sbjct: 190 YTEYI 194
>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
Length = 202
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + K+ K+ D SG AD++ + L R Y+ Q + + A+
Sbjct: 21 VTAGYYIAHKKGEKLWKIDDHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIRAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D E +Y D +G+ + Y + GSGS
Sbjct: 81 VNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSPYAKGV 140
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-DGI 179
L+ + L+ EAVDL +A D +G+ +++V + K +G
Sbjct: 141 LEVGYRG-------------DLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTITKREGF 187
Query: 180 HREYMELRK 188
R + +K
Sbjct: 188 KRIFTTQQK 196
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ D + +G AD + + +L +++ + + +S ++
Sbjct: 33 SAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + ++GG D EG ++ D GS E+ Y + GSGS + L
Sbjct: 93 RLCSLIFHQNRGYPFMADILVGGYDTEGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGLL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+ + K L+ EA + +A R+I TGD + I V++KDG
Sbjct: 152 EEEYKE-------------DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195
>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 205
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 17/188 (9%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ L+ DY K+ K+ DK + +G D + + + L RH +Y+ + + + G+L+
Sbjct: 32 FQTLATDYKKVYKIHDKLFIGLAGLGTDAQTMHQKLKFRHNLYKLREERNIKPSTFGELV 91
Query: 65 SNTLYYKRFFPYYSFNVLGGL-DNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLD 122
S+ LY KRF PY+ V+ GL D + D +G+ E + G+
Sbjct: 92 SSMLYEKRFGPYFVSPVIAGLEDKTNVPYICGMDTIGAIETANDFMVAGT---------- 141
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+P L + P E E + + V C S +RD +G + V+ KD +
Sbjct: 142 ----APDSLYGMCESMFRPDMEPEELFETVTQCLMSGADRDALSGWGAIVYVITKDAVVA 197
Query: 182 EYMELRKD 189
++ R D
Sbjct: 198 RTLKGRMD 205
>gi|357469569|ref|XP_003605069.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506124|gb|AES87266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 270
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 24 MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
MASSGFQADVKALQK+L+ARHL YQ+QHNKQ+SC G
Sbjct: 1 MASSGFQADVKALQKVLSARHLTYQNQHNKQISCRCSG 38
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + S+D K+ ++ + + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SLGHMVSSKDVQKVEEIHPRGALTIAGSVSAAQSLISSLRAEVRLYESRRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D+EG +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGGF--YIVQPILGGVDDEGA-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + LS EA ++ SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEFSE-------------DLSIDEAREVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + KI K+ D +G +D + L ++A +Y+ ++ MS A
Sbjct: 30 SMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYISAEVALYRLRNGAPMSVEAAA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ SN L+ RF+PYY +LGG+D +G +++ D G + S GSGS + L
Sbjct: 90 NMTSNILHASRFYPYYVQTLLGGVDEKGP-ALFSLDPSGGVIKDLMISTGSGSPVAYGVL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
+++ + E +V +A ERD Y+G+ +++ + K+
Sbjct: 149 EDRYNQEMDI-------------EEGTSVVIRAIKAAMERDTYSGNGIKVATITKE 191
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + ++L L A +Y+ + K M+ A+
Sbjct: 70 SLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQSLISTLKAETSLYETRRGKDMTMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT EA ++ SA ERD+ +G+ + + V+ +DG+
Sbjct: 187 EQEY----------HDDVTV---DEATEIAAKAIQSAVERDLASGNGINVAVVTEDGV 231
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ KI ++ D+ + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 VATDFQKIYRIHDRVFLGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL +E K + T D++G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDEDKPFICTMDSIGAKE 130
>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 206
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+ +++ K++ ++ + ++G AD++A+ +L+ + +Y+ + ++ LLS
Sbjct: 33 VANKNAEKVMAISGSIGITTAGMVADLQAMVRLMRSELTLYEIRSGSKLDTDGAVSLLSA 92
Query: 67 TLYYKRF---FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
L+ KR Y F ++GG D K +++ D G + ++ GSG + L+
Sbjct: 93 VLFNKRLSLNLIYGEF-IVGGYDTAPK--LFSIDEAGGQGKDKFTVTGSGGVFALGVLEG 149
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
K +SE EAV L +S+ RD+YTG+ ++I V+NK G
Sbjct: 150 DYKDN-------------MSEEEAVKLAYKAISSSIRRDVYTGEGIDIAVINKKG 191
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I + KI K+ D SG AD++++ L R Y+ ++ + + A+
Sbjct: 21 VTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLTLRAHEYKIEYKRPIPISAL 80
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+S L+Y R + Y +++GG+D E +Y D +G+ + Y + GSGS P+
Sbjct: 81 VNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGTVTKEKYIATGSGS----PY 136
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDGI 179
L+ + +D AVDL +A D +G+ +++VV+ K+G
Sbjct: 137 AKGALEVGYREDMTLED---------AVDLAIKAVKAAIRNDPGSGEGIDVVVITRKEGF 187
Query: 180 HREYMELRK 188
R + +K
Sbjct: 188 KRVFTTQQK 196
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I SR KI ++ D + ++G D +AL +++ A +Y+ Q + ++ A+
Sbjct: 28 TMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRMIQAEARLYRMQRGEPLTIKAIT 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPF 120
LLSN L +R+FP+ V+GG+D G +++ DA+G E S GSGS +
Sbjct: 88 SLLSNILSARRYFPFLVQLVVGGVDKMGPK-IFSLDALGGQIEEHDIVSTGSGSPIAYGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
L++ L P L QD L +A +RD +G+ + +V + KD
Sbjct: 147 LES-LYKPG---LSIQDGSV---------LCVRAVHTAMKRDSASGNGIALVRITKD 190
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I R KI+K+ DK + ++G AD + L L + + ++
Sbjct: 40 TAGTFIAHRKTRKILKITDKMALTTAGLVADAQVLADWLNTQMNYLTITKKQPVTVREAA 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLS LY + FP+Y +LGG D + +++ D GS Y+S GSGS + + L
Sbjct: 100 HLLSLLLYRYKLFPFYVQLILGGYDTAPR--LFSLDLYGSLVEEKYTSTGSGSPIAIGVL 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
++ + +S EA L A +RD TGD ++ V++ +GI
Sbjct: 158 EDGYRE-------------NMSPEEARKLAVKAVQMALKRDSATGDGVDSVIITSEGI 202
>gi|307106214|gb|EFN54460.1| hypothetical protein CHLNCDRAFT_31571 [Chlorella variabilis]
Length = 225
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS--CP 58
+STG I +R KI LAD + SG AD +A+ + R+ QH+ Q +
Sbjct: 37 VSTGTYISNRASDKITPLADNVYLLRSGSAADTQAVADYV--RYFTEQHEMQLQRTPGVR 94
Query: 59 AMGQLLSNTLY-YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLI 117
+ QL+ Y YK ++ G D + G VY G+ R +++ GSGST I
Sbjct: 95 TVAQLVREMNYQYKHLV---GAMIVAGWDEDEGGQVYGCPIGGTISREPWTTDGSGSTFI 151
Query: 118 MPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
FLD++ K + +A DLV A A RD +G + +V ++K+
Sbjct: 152 WGFLDSEFKD-------------GMGRQDAEDLVAMALALAMSRDGSSGGVIRLVTVSKE 198
Query: 178 GIHREYM 184
G R +
Sbjct: 199 GATRRLI 205
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D ++L +L++A IY+ + M+ +
Sbjct: 35 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCT 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
L+SN L+ R +P + +LGG D +++ D VG E +++ GSGS
Sbjct: 95 TLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +S + AV LS SA +RD Y+G+ + + +NKDG++
Sbjct: 155 LEAEYRSDVTIDKGLLVAVKALS-------------SAMQRDAYSGNGISLAHINKDGVN 201
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI K+ + +G AD + L K+++A +Y+ ++ K +S A + SN L+
Sbjct: 42 KIFKIDNHIAATIAGSVADAQTLMKVISAETSLYRLRNGKDISLEAAAAVSSNILHSS-- 99
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
P Y ++GG+D+ G +Y+ DA G + + S GSGST L+++
Sbjct: 100 -PAYVQTLIGGVDDTG-ASIYSLDAAGGMIKDTFISTGSGSTFAYGVLEDRFYED----- 152
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
++ EA ++ +ATERD ++G+ + + KDG
Sbjct: 153 --------ITVEEATEVAIRAIKAATERDTFSGNGFLVANVTKDG 189
>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
gi|255627485|gb|ACU14087.1| unknown [Glycine max]
Length = 204
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDKLFIGLSGLATDAQTLYQRLLFRHKLYQLREERDMKPQTFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ K + T DA+G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKE 130
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ + ++ D+ +I K+ DK + +G +DV+ L + L RH ++Q Q + M
Sbjct: 28 LGVNFQTIATDFQRIFKIHDKLYVGLAGLASDVQTLYQRLKYRHNLFQLQEERDMRPETF 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
+S TLY KRF PY+ ++ GL + K + T D++G+ E
Sbjct: 88 SNFVSATLYEKRFGPYFVQPLIAGLGADNKPYICTMDSIGAIE 130
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTLKAETSLYETRRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT EA ++ SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------HDEVTV---DEATEIAAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 92/186 (49%), Gaps = 14/186 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G+ ++S+ K+ + ++ +ASSG AD++ + K++ A + + + +S A
Sbjct: 29 VSYGFYLMSKSGKKVYPITNRIGLASSGILADIQTITKVIRANIANMEIEMKRPVSVRAA 88
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS L+ ++ PY + ++GG+D EG ++ D+ GS +++ G+G+ +
Sbjct: 89 AKLLSIMLFQNKYMPYIAETMVGGIDEEGP-KLFILDSWGSLIEDDFAALGNGARTAIGL 147
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
++ S ++ EA +L A RD +GD ++ +V+ +G
Sbjct: 148 IETGYSS-------------SITVKEAKELAIKAIKEAIARDPTSGDGIDTLVITGNGYL 194
Query: 181 REYMEL 186
+ ++L
Sbjct: 195 EDSIKL 200
>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 206
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+ +++ K++ ++ + ++G AD++A+ +L+ + +Y+ + ++ LLS
Sbjct: 33 VANKNAEKVMSISSNIGVTTAGMVADLQAMVRLMRSELTLYEIRAGSKLDTDGAVSLLSA 92
Query: 67 TLYYKRF---FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
L+ KR Y F ++GG D E K +++ D G + ++ GSG + L+
Sbjct: 93 VLFNKRLSLNLIYGEF-IIGGYDTEPK--LFSIDEAGGQGKDKFTVTGSGGVFALGVLEG 149
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
K ++E E + L +S+ RD+YTG+ ++I V+NK G
Sbjct: 150 DYKDN-------------MTEEEGIKLAYKAISSSIRRDVYTGEGVDIAVINKKG 191
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ ++ +S +++KI K+ D + SG D++ L +LL R +Y+ + M
Sbjct: 31 ANNFTTVSTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVNLYEIRQETPMDIDCFA 90
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+LS+ LY RF PY+ F V LD+EGK + +Y+ +G +
Sbjct: 91 NMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKVCSFEPYLTAYDLIGAKCETK--- 147
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
F+ N + S + + + + + C SA +RD +G E+ VL
Sbjct: 148 ---DFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLSGWGAEVYVLT 204
Query: 176 KDGIHREYMELRKD 189
D I ++ ++ R D
Sbjct: 205 PDTIMKKKLKARMD 218
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I ++ DK + SG DV L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRIFRIHDKVFIGLSGLGTDVLTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ K + T D++G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKE 130
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 15/179 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I + KI K+ + +G D + L + L A +Y+ + K + A +
Sbjct: 32 GNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASI 91
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
SN L+ R FP+ ++GG+D G +Y+ D G Y S GSGS + L++
Sbjct: 92 ASNILHASRMFPFIVQMLIGGIDETGPK-IYSVDPAGGKIEDKYVSTGSGSPIAYGVLED 150
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKDGIHR 181
+ K +S +A+++ S+T+RD ++GD + + VV K+G R
Sbjct: 151 RYKK-------------DMSVEDAINIALRAIKSSTKRDTFSGDGISLAVVTEKEGFKR 196
>gi|195132590|ref|XP_002010726.1| GI21700 [Drosophila mojavensis]
gi|193907514|gb|EDW06381.1| GI21700 [Drosophila mojavensis]
Length = 101
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 88 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD-------NQLKSPSPLLLPAQDAVT 140
E KG VY YD +GSYERV Y G+ L++P LD N+L P L +D
Sbjct: 1 EVKGAVYYYDPIGSYERVRYRVVGTSYALLLPCLDVFYGWENNRLTPP----LKDED--- 53
Query: 141 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
L+ AV + + C A++RDIY+GD E++ + +G+ ++LR D
Sbjct: 54 -LTMTMAVRMARKCLYIASDRDIYSGDMGELLSVTSEGMKSSTIKLRAD 101
>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 202
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S + K+ + +C++ G D + L +LL R +Y+ + +++M C + L++
Sbjct: 33 VSANMQKVYPMTSRCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATM 92
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
LY KRF PY+ V+ GL N+G+ + ++D +G+
Sbjct: 93 LYEKRFGPYFCEPVIAGLKNDGEPFISSFDLIGT 126
>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S + K+ + +C++ G D + L +LL R +Y+ + +++M C + L++
Sbjct: 275 VSANMQKVYPMTSRCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATM 334
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
LY KRF PY+ V+ GL N+G+ + ++D +G+
Sbjct: 335 LYEKRFGPYFCEPVIAGLKNDGEPFISSFDLIGT 368
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + + KI K+ D V +G D + L K++ A +YQ ++N +MS A
Sbjct: 29 SMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKMSVKAAA 88
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ +N L R P Y +LGG+D + K +Y+ D G Y S GSGS + L
Sbjct: 89 SVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLDPAGGMIEDTYISTGSGSIVAYGVL 144
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+++ ++ E +++ +A+ERD ++G+ + + KDG
Sbjct: 145 EDRYHEE-------------ITTDEGLEIAVRAIKAASERDTFSGNGYLVAKVTKDG 188
>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S + K+ + +C++ G D + L +LL R +Y+ + +++M C + L++
Sbjct: 275 VSANMQKVYPMTSRCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATM 334
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
LY KRF PY+ V+ GL N+G+ + ++D +G+
Sbjct: 335 LYEKRFGPYFCEPVIAGLKNDGEPFISSFDLIGT 368
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTLKAETSLYETRRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L FF +LGG+D++G +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRTGAFFIVQP--ILGGVDDDGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT + EAE + SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------HDDVT-IEEAETI--AAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ D + +G AD + L +L I+ Q N+ + ++
Sbjct: 33 SAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQNLTDILRYHANIHAVQKNENIPIRSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + +LGG D +G ++ D GS E+ Y + GSGS + L
Sbjct: 93 RLCSLVFHQNRGYPFIADILLGGYDQDGP-QLFNIDMFGSVEKKSYVTTGSGSPVAYGVL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+++ + D +T L +A+ + L +A R+I TGD + I ++K+G
Sbjct: 152 EDEYR----------DDLT-LEDAKGIAL--RAVKAAIVRNIGTGDGINIAAIDKNGFQL 198
Query: 182 EYMELRK 188
E +K
Sbjct: 199 LTKEQKK 205
>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
Length = 204
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D+ + SG DV+ L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY V+ GL ++ K + T D++G+ E
Sbjct: 95 LYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIGAKE 130
>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
proteasome beta subunit C-1; AltName: Full=Proteasome
component T
gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
thaliana]
gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
Length = 204
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D+ + SG DV+ L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY V+ GL ++ K + T D++G+ E
Sbjct: 95 LYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIGAKE 130
>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
subunit. EST gb|T76747 comes from this gene [Arabidopsis
thaliana]
gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D+ + SG DV+ L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY V+ GL ++ K + T D++G+ E
Sbjct: 95 LYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIGAKE 130
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I+ ++ K+ ++ M +G D + L + + A +Y+ Q M A+ LLSN
Sbjct: 34 IMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSN 93
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L ++ PY ++GG+D V++ DA G Y+S GSGS + L++Q
Sbjct: 94 MLNQVKYMPYMVQLLVGGIDTSPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYN 151
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDG 178
LS E VDLV ++A +RD +G +++ V+ KDG
Sbjct: 152 E-------------KLSIDEGVDLVIRAISAAKQRDSASGGMIDVAVITKKDG 191
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + K LS EA + SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEFKD-------------GLSIEEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|195440110|ref|XP_002067892.1| GK22295 [Drosophila willistoni]
gi|194163977|gb|EDW78878.1| GK22295 [Drosophila willistoni]
Length = 212
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 10 RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-AMGQLLSNTL 68
R SK+ ++ + V+ S G D AL L+ + L Y+ N CP ++ +L+ T
Sbjct: 41 RSQSKLFDVSPQTVLGSVGCWCDTLALLSLVRSFSLKYELD-NLMPVCPDSLASMLTRTK 99
Query: 69 YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 128
++ Y+ V+ G+D+ G G VY D +G+Y R+ Y G+G +I+P L N +
Sbjct: 100 LTRQ---YFVSTVVTGIDSNGLGAVYFNDPIGNYLRLPYHISGTGGRIILPTL-NWFEGN 155
Query: 129 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
+ A T L+ + V + F +A + D +TG+ + I ++ ++G+ + + L
Sbjct: 156 EEDHMNA--ITTSLTVDKTVQISMEAFRAARDCDSFTGNCMFINIITREGVQFKQLPL 211
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 17/179 (9%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I ++ K+ + + M +G D ++L ++++A IY+ + MS A L
Sbjct: 33 GNLIADKEAKKLYPIDEYIAMTIAGSVGDAQSLVRIISAETKIYKMRTGNNMSPLACTTL 92
Query: 64 LSNTLYYKRFFPYYSFNVLGGLD--NEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
+SN L+ R FP + ++GG D N+ + +Y+ DAVG E ++S GSG
Sbjct: 93 MSNVLHGNRHFPLMNQLIVGGYDVCND-EPQLYSLDAVGGINEETTFTSTGSG------- 144
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
SP+ + + V L + A+ L +SA +RD Y+G+ + + ++K+G+
Sbjct: 145 ------SPTAYGVLEAEYVNKLKTSAALKLAVKAISSAMKRDAYSGNGISLAKIDKNGV 197
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ D + +G AD + + +L +++ + + +S ++
Sbjct: 33 SAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + ++GG D EG ++ D GS E+ Y + GSGS + L
Sbjct: 93 RLCSLIFHQNRGYPFMADILVGGYDAEGP-ALFNIDMFGSVEKKAYVTTGSGSPVAYGLL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+ + + L+ EA + +A R+I TGD + I +++KDG
Sbjct: 152 EEEYRE-------------DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAIMDKDG 195
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + KI K+ + +G AD ++L K L A +Y+ ++++++S A
Sbjct: 30 SMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +N L+ RF+P+ +LGG+D G +Y+ D G + S GSGS + L
Sbjct: 90 ALAANILHSSRFYPFIVQTLLGGVDENG-AKIYSLDPSGGMIPDKFVSTGSGSPVAYGVL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
+++ L EAVD+ SA ERD Y+G+ + + + ++
Sbjct: 149 EDRYSD-------------ELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEE 191
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + ++ KI+ + D+ M ++G AD++ + + + N+ ++ ++
Sbjct: 44 SAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQFIYNYMKNIYHYNVISGNRPVTVKSLA 103
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+N L ++FPY ++GG D + + ++ D +G Y + GSGS + M L
Sbjct: 104 TYLTNVLSQSKYFPYLVQILIGGYDTQPR--LFNLDYLGDMTEETYVATGSGSPVAMGVL 161
Query: 122 DNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-I 179
+D P LS EA+DL SA +RD +TG + + L+KDG +
Sbjct: 162 --------------EDGYRPDLSGEEAMDLGARAVLSAIKRDSFTGTGVIVTKLSKDGHV 207
Query: 180 HREYMELRK 188
RE RK
Sbjct: 208 EREIYPNRK 216
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTLRAETSLYEARRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L FF +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAFFVVQP--ILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ + D VT + EA+ + SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------DDDVT-IDEAKTI--AAKAIQSAVERDLASGNGINVAVVTDDGVE 232
>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
Length = 220
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ K K+ + C A+SG DV+ L+ + + +Y+ + +K+MS + ++ +
Sbjct: 51 VSSNFPKAFKVTESCFFAASGLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSM 110
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLK 126
LY +RF P++ +V+ GLD + + +D VG+ + G+ S + + K
Sbjct: 111 LYSRRFGPWFVDSVIAGLDTDSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFK 170
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P + P Q + V C + +RD +G E+ V+ D + ++
Sbjct: 171 ---PGMDPEQ----------LFETVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKT 217
Query: 187 RKD 189
R D
Sbjct: 218 RMD 220
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
LS ++ KI + DK + +G DV L ++ +H +Y+ + + + + L+S+T
Sbjct: 36 LSNNFEKIFQFGDKTFLGLTGLATDVITLSEVFRFKHNLYKLREERDIEPKTLANLVSST 95
Query: 68 LYYKRFFPYYSFNVLGGLDNEGK-GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY+ ++ GLD + + +D++G + G ++ + L L
Sbjct: 96 LYEKRFGPYFVSPLVAGLDPKSNVPFICGFDSIGCIDFAKDFIVGGTASDQLYGLCESLY 155
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
PS L +D +S+ +A +RD +G + ++ KD I R ++
Sbjct: 156 EPS---LEPEDLFETISQV---------LLNAVDRDALSGWGAVVYIVTKDKIIRRVLKT 203
Query: 187 RKD 189
R+D
Sbjct: 204 RQD 206
>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+ + ++ D+ +I K+ D + SG DV+ + + L RH +YQ + + M
Sbjct: 28 LGVNFQTIACDFQRIFKIHDHLYIGLSGLATDVQTMHQRLNFRHKLYQLREERNMRPETF 87
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS 101
L+S LY KRF PY+ ++ GL+++G + T D +G+
Sbjct: 88 ASLVSAMLYEKRFGPYFCEPIIAGLNDDGTPFICTTDLIGA 128
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + +K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTLRAETSLYEARRSKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L FF +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAFFVVQP--ILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + +S EA + SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEYDD-------------EVSIDEAKTIAAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe]
Length = 204
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 53/93 (56%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
L+ ++ K+ + DK + +G DV+ L +L + +Y+ + +Q+ L+S+T
Sbjct: 35 LTNNFPKVFAMGDKTYLGLTGLATDVQTLYELFRYKVNLYKFREERQIQPKTFANLVSST 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 100
LY KRF PY+SF V+ G+ N+ + +D++G
Sbjct: 95 LYEKRFGPYFSFPVVAGVSNDNTPFICGFDSIG 127
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + +G + ++L + A +Y+ + + MS A+
Sbjct: 70 SLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSIRAEVRLYEARRGEDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL N L FF +LGG+D++G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLLGNFLRSGGFFIVQP--ILGGVDDDGP-HIYSIDPAGSIIEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI-- 179
+ Q LS EA + SA ERD+ +G+ + + V+ +DG+
Sbjct: 187 EQQYNE-------------DLSIEEAKTVAARSIESAVERDLASGNGINVCVVTEDGVEI 233
Query: 180 --HREYMEL 186
H ++ EL
Sbjct: 234 TQHEDFEEL 242
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 16/184 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ K+ + + +G + ++L + L A +Y + + MS A+
Sbjct: 68 SLGNMVSSKTVQKVEDVHPTGALTIAGSVSAAQSLIRTLRAEVNLYDARQGEDMSMTALS 127
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L FF VLGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 128 TLTSNLLRSGGFF--IVVPVLGGVDDEGP-HIYSMDALGGTTEETYAVSGSGSQFALGVL 184
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + LS EA D+ SA ERD +G+ + I + ++G+
Sbjct: 185 EQHYEEG-------------LSVEEARDVAIRSVGSAVERDTASGNGINIATVTEEGVDI 231
Query: 182 EYME 185
E E
Sbjct: 232 ERFE 235
>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
Length = 215
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ S+ KI +L + + +G D + + +++ ++ +++ + K++S G
Sbjct: 39 SMGHLTASKYAQKIYRLDENLGLTIAGSVGDAQRIVRMMRSQLKLHKLE-TKELSVRGAG 97
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD-AVGSYERVGYSSQGSGSTLIMPF 120
LLSN L+ + PY + +LGGL++ G G ++ D A G E +++ GSGS +
Sbjct: 98 TLLSNILHSSKMMPYMNQFILGGLED-GNGKLFDLDPAGGLMEHNYFTATGSGSQMAYGV 156
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L++ + + +E ++L K SA ERD +G+ + +V + +DG
Sbjct: 157 LEDHYEE-------------DMGHSEGLELAKKAIKSAMERDTASGNGIMVVEITEDG 201
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTLRAETSLYEARRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT + EA+ + SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------DDGVT-IDEAKTI--AAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTLRAETSLYEARRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT + EA+ + SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------DDGVT-IDEAKTI--AAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|384249780|gb|EIE23261.1| proteasome subunit [Coccomyxa subellipsoidea C-169]
Length = 227
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQH--QHNKQMSCP 58
+STG + +R KI L+D M SG AD +A+ + RH H + +
Sbjct: 33 VSTGNYVSNRASDKITSLSDNAYMLRSGSAADTQAIADYV--RHYTAMHSMELGRDPKIK 90
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ +L++ Y + + ++GG D EG G ++ G+ + +++ GSGST I
Sbjct: 91 SVAKLVAQINYSNKNLLMGAM-IVGGWDPEGGGQIFGVPISGTLVQQDWTTDGSGSTYIW 149
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+LD+ + +S EA +LVKT A A RD +G ++ + K G
Sbjct: 150 GYLDSAYRD-------------GMSREEAEELVKTALALAMSRDGSSGGLARLITITKAG 196
Query: 179 IHREYME 185
R ++
Sbjct: 197 AERRMIK 203
>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
Length = 204
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S+
Sbjct: 35 IATDFQRISKIHDKLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSSM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
Y KRF PY+ V+ GL ++ K + T DA+G+ E
Sbjct: 95 QYEKRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKE 130
>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
Length = 237
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ KI ++ + + SG + +AL L A +Y+ + +++MS A+
Sbjct: 64 SFGNMVSSKQAKKIAEIHPRGALTISGAVSPAQALISNLRAEVDLYEARRSEEMSMQALS 123
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L FF + +LGG+D+EG +Y+ D GS Y++ GSGS L
Sbjct: 124 TLTSNFLRSGAFFIVHP--ILGGVDDEGS-HIYSIDPSGSVMEEDYNATGSGSPFAYGVL 180
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ Q + LS EA + SA ERD +G+ + + + +G+
Sbjct: 181 EQQYEE-------------GLSNDEAETVAAHAVKSAVERDTASGNGIIVSTITDEGVTT 227
Query: 182 EYME 185
E E
Sbjct: 228 EEYE 231
>gi|363756318|ref|XP_003648375.1| hypothetical protein Ecym_8276 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891575|gb|AET41558.1| Hypothetical protein Ecym_8276 [Eremothecium cymbalariae
DBVPG#7215]
Length = 215
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + S
Sbjct: 40 TTGTYIANRVTDKLTRVHDKIWCCRSGSAADTQAVADIVQHHLDLYAAQYG-EPSVNTAA 98
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L S Y + F ++ G D++ KG VYT GS + Y+ GSGST I +
Sbjct: 99 SLFSTICYENKDFLTAGI-IVAGYDDKNKGEVYTIPLGGSVHKAPYAIAGSGSTFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +S+ E + +K + A + D +G + +VVL K+G+ R
Sbjct: 158 DKNFKE-------------NMSKEETIRFMKHSLSQAIKWDGSSGGVIRMVVLTKEGVER 204
>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
Length = 204
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S+
Sbjct: 35 IATDFQRISKIHDKLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMRPETFASLVSSM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
Y KRF PY+ V+ GL ++ K + T DA+G+ E
Sbjct: 95 QYEKRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKE 130
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNLKAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L FF +LGG+D +G G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGAFFVVQP--ILGGVDEDG-GHIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + LS EA + +A ERD+ +G+ + I V+ +G+
Sbjct: 187 EREYSD-------------DLSVDEAKQVATNAIRAAVERDLASGNGINIAVVTDEGV 231
>gi|115466298|ref|NP_001056748.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|55296478|dbj|BAD68674.1| putative beta 1 subunit of 20S proteasome [Oryza sativa Japonica
Group]
gi|113594788|dbj|BAF18662.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|125553981|gb|EAY99586.1| hypothetical protein OsI_21564 [Oryza sativa Indica Group]
gi|125595991|gb|EAZ35771.1| hypothetical protein OsJ_20062 [Oryza sativa Japonica Group]
gi|215679027|dbj|BAG96457.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + + R+ + HQH Q+ PA
Sbjct: 46 STGMYVANRASDKITQLTDNVYVCRSGSAADTQVISEYV--RYFL--HQHTIQLGQPATV 101
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ R ++ GSGS+
Sbjct: 102 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSS 158
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 159 YLYGLLDHEWKE-------------GMSQEEAEKFVVKVVSLAIARDGASGGVVRTVTIN 205
Query: 176 KDGIHREY 183
DG+ R++
Sbjct: 206 ADGVSRKF 213
>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
Length = 206
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + + M L+S+
Sbjct: 35 IATDFQRISKIHDKLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSSM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
Y KRF PY+ V+ GL ++ K + T DA+G+ E
Sbjct: 95 QYEKRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKE 130
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
KI K+ D +G +D ++L K + A +++ ++ K+++ A L SN L+ R
Sbjct: 42 KIFKIDDHIGTTIAGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHSSRG 101
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
+P+Y +LGG+D++G +Y+ D G + S GSGS + L+++
Sbjct: 102 YPFYVQTLLGGVDDKGP-ALYSLDPTGGVIKDLMISTGSGSPVAYGVLEDRYSE------ 154
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
L E +D+ SA ERD Y+G+ + + + +
Sbjct: 155 -------DLYVEEGIDVAIRAIKSAMERDAYSGNSILVATITE 190
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I+ ++ K+ ++ M +G D + L + + A +Y+ Q M A+ LLSN
Sbjct: 26 IMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSN 85
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L ++ PY ++GG+D V++ DA G Y+S GSGS + L++Q
Sbjct: 86 MLNQVKYMPYMVQLLVGGIDTAPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYS 143
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDGIHREYME 185
++ E VDLV ++A +RD +G +++ V+ KDG Y++
Sbjct: 144 E-------------KMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDG----YVQ 186
Query: 186 LRKD 189
L D
Sbjct: 187 LPTD 190
>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 228
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ KI ++ + + SG + +AL L A +Y+ + ++MS A+
Sbjct: 55 SAGNLVASKRAKKIAEIHPRGALTISGAVSAAQALISNLQAEVDLYEARRGEEMSMQALS 114
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L F Y +LGG+D+EG +Y+ D GS Y + GSGS L
Sbjct: 115 TLTSNFLRSGAF--YIVQPILGGVDDEG-AHIYSIDPAGSVMEEEYDATGSGSPFAYGVL 171
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ Q + LS EA + SA ERD +G+ + I + +DG+
Sbjct: 172 EQQYED-------------GLSNDEARTVAARAVKSAVERDTASGNGIIISEITEDGVEI 218
Query: 182 E 182
E
Sbjct: 219 E 219
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTLRAETSLYEARRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT EA ++ SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------DDDVTI---DEAKNIAAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I+ ++ K+ ++ M +G D + L + + A +Y+ Q M A+ LLSN
Sbjct: 34 IMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSN 93
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L ++ PY ++GG+D V++ DA G Y+S GSGS + L++Q
Sbjct: 94 MLNQVKYMPYMVQLLVGGIDTAPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYS 151
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDGIHREYME 185
++ E VDLV ++A +RD +G +++ V+ KDG Y++
Sbjct: 152 E-------------KMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDG----YVQ 194
Query: 186 LRKD 189
L D
Sbjct: 195 LPTD 198
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I+ ++ K+ ++ M +G D + L + + A +Y+ Q M A+ LLSN
Sbjct: 34 IMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSN 93
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L ++ PY ++GG+D V++ DA G Y+S GSGS + L++Q
Sbjct: 94 MLNQVKYMPYMVQLLVGGIDTAPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYS 151
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDGIHREYME 185
++ E VDLV ++A +RD +G +++ V+ KDG Y++
Sbjct: 152 E-------------KMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDG----YVQ 194
Query: 186 LRKD 189
L D
Sbjct: 195 LPTD 198
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + + KII + D ++A SG AD++ + K+L + + + M+
Sbjct: 22 SMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAA 81
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPF 120
LLS+ LY RF+ ++ G N + +Y+ D +G+ + Y ++GSG + +
Sbjct: 82 NLLSHLLYQNRFYLNPLGLLIAGPINSKEFGIYSLDGIGAISEIKDYFAEGSGGVIALGT 141
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+ + +P ++ +A+ L + S+ RD+++G +EI + K G+
Sbjct: 142 LEAEY-NPD------------ITVRDAIKLAEKALKSSIARDVFSGYGIEIYTITKKGVE 188
Query: 181 REYMELRK 188
+ ++E +K
Sbjct: 189 KLFLEAQK 196
>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 204
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ ++ +S +++K+ K+ D + SG D++ L +LL R +Y+ + M
Sbjct: 17 ANNFTTISTNFTKVFKMNDYVYVGLSGLATDIQTLYELLRYRVNLYEIRQETPMDIDCFA 76
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCVYTYDA-VGSYERVGYSSQGSGS 114
+LS+ LY RF PY+ F V D+EGK + T++ + +Y+ +G +
Sbjct: 77 NMLSSILYANRFSPYFVNPIVVGFRVKHTFDDEGKK-IRTFEPYLTAYDLIGAKCETK-- 133
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
F+ N + S + + + + + C SA +RD +G E+ VL
Sbjct: 134 ----DFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLSGWGAEVYVL 189
Query: 175 NKDGIHREYMELRKD 189
D I ++ ++ R D
Sbjct: 190 TPDSIMKKKLKARMD 204
>gi|374633123|ref|ZP_09705490.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373524607|gb|EHP69484.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 196
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
+S G +LS+ K+ ++ + + +G D++AL +++ A Y+ + + +S A
Sbjct: 25 LSYGGYVLSKSARKVFTIS-RFGIGGAGLFGDLQALTRIMNANIRYYELYNGRPISARAA 83
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+LLS LY ++ P+ S + G+D +G ++ D +GS Y++ GSG+ + +
Sbjct: 84 AKLLSIILYQYKYMPFISEVLFAGID-DGTPQLFVLDPLGSLLDDIYAAVGSGARVAIGV 142
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-I 179
L+ + K L +A +L ++ ERD+ +GD +++++++K+G I
Sbjct: 143 LEAEYKDSMNL-------------TQARELALKSLRASVERDVTSGDGIDLLIIDKNGKI 189
Query: 180 HREYM 184
E++
Sbjct: 190 SEEFL 194
>gi|357466571|ref|XP_003603570.1| Proteasome subunit beta type [Medicago truncatula]
gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
gi|355492618|gb|AES73821.1| Proteasome subunit beta type [Medicago truncatula]
gi|388518779|gb|AFK47451.1| unknown [Medicago truncatula]
Length = 232
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 34 STGVYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATV 89
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G +Y G+ + ++ GSGS+
Sbjct: 90 KVAANLV---RLLAYNNKNNLQTGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSS 146
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA DLVK + A RD +G + V++N
Sbjct: 147 YLYGFFDQAWKDG-------------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIIN 193
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 194 SEGVTRNF 201
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + + KI K+ D V +G D + L K++ A +YQ ++N ++S A
Sbjct: 29 SMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKIIEAEVSLYQMRNNDKISVKAAA 88
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ +N L R P Y +LGG+D + K +Y+ D G Y S GSGS + L
Sbjct: 89 SVTANIL---RSGPMYVQTLLGGMDGD-KPSLYSLDPAGGMIEDTYISTGSGSIVAYGVL 144
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+++ ++ E +++ +A+ERD ++G+ + + KDG
Sbjct: 145 EDRYHEE-------------ITTDEGLEIAVRAIKAASERDTFSGNGYLVAKVTKDG 188
>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
Length = 228
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ KI ++ + + SG + +AL L A +Y+ + ++MS A+
Sbjct: 55 SAGNMVASKRAQKIAEIHPRGALTISGAVSAAQALISNLRAEADLYEARRGEEMSMQALS 114
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L F Y +LGG+D+EG +Y+ D GS Y + GSGS L
Sbjct: 115 TLTSNFLRSGAF--YIVQPILGGVDDEGA-HIYSIDPAGSVMEEEYDATGSGSPFAYGVL 171
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ Q + LS EA + SA ERD +G+ + + + +DG+
Sbjct: 172 EQQYED-------------GLSNDEARTVAARAVKSAVERDTASGNGIILSEITEDGVEI 218
Query: 182 E 182
E
Sbjct: 219 E 219
>gi|255938700|ref|XP_002560120.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584741|emb|CAP74267.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPAMG 61
Y L+R D ++ DK ++ G +D++ L +LL + + + H+ M + +
Sbjct: 62 YGSLARFSDVKRLRNFGDKAMVGFGGDVSDMQYLDRLLDSMDIKENYSHHGNMLNAKNLH 121
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ Y +R F P ++ ++ G D +G+ + + D +G+ + + G G+ L +P
Sbjct: 122 TYLAKVFYKRRSEFNPLWNHVLVAGFDGQGEPFLSSADLLGTTFSAPHLATGFGAHLAVP 181
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L + +PL +S+ +AV+ +K C RD + DK I V+ KDGI
Sbjct: 182 ILRRKFPEGTPL--------EQVSKEDAVEALKECLKVLFYRDARSADKYSIAVITKDGI 233
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQHLISTLKAETSLYETRRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGA-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT EA ++ SA ERD+ +G+ + + V+ +G+
Sbjct: 187 EQEY----------HDDVTV---DEATEIAAKAIQSAVERDLASGNGINVAVVTDEGV 231
>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
Length = 239
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I SR +KI + D V+ SG AD +A+ + +Y NK ++
Sbjct: 44 SAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSS 103
Query: 62 QLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+ LY R S +VL G D E G VY G R ++ GSGST + F
Sbjct: 104 QIFRQFLYNYR--EQLSASVLVAGWDEELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGF 161
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD+Q + P L L E +A+ VK AT RD +G + + V+NK G
Sbjct: 162 LDSQWR---PNLT--------LEECKAI--VKQAVGLATFRDGSSGGVVRLAVINKAGSQ 208
Query: 181 RE 182
E
Sbjct: 209 FE 210
>gi|356507848|ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
Length = 233
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 35 STGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATV 90
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G +Y G+ + ++ GSGS+
Sbjct: 91 KVAANLV---RLLSYNNKNFLETGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSS 147
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA DLVK + A RD +G + V++N
Sbjct: 148 YLYGFFDQAWKEG-------------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIIN 194
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 195 SEGVTRNF 202
>gi|115448935|ref|NP_001048247.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|8671502|dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|46805414|dbj|BAD16916.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113537778|dbj|BAF10161.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|125541285|gb|EAY87680.1| hypothetical protein OsI_09094 [Oryza sativa Indica Group]
gi|125583826|gb|EAZ24757.1| hypothetical protein OsJ_08530 [Oryza sativa Japonica Group]
gi|215737147|dbj|BAG96076.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737608|dbj|BAG96738.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765462|dbj|BAG87159.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 46 STGMYVANRASDKITQLTDNVYICRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATV 101
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ R ++ GSGS+
Sbjct: 102 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSS 158
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 159 YLYGLLDHEWKE-------------GMSQEEAEKFVVKVVSLAIARDGASGGVVRTVTIN 205
Query: 176 KDGIHREY 183
DG+ R++
Sbjct: 206 ADGVSRKF 213
>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M A L+S
Sbjct: 35 VATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQAFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDNDEPFICTMDCIGAKE 130
>gi|351721274|ref|NP_001236436.1| uncharacterized protein LOC100305513 [Glycine max]
gi|255625747|gb|ACU13218.1| unknown [Glycine max]
Length = 233
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 35 STGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATV 90
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G +Y G+ + ++ GSGS+
Sbjct: 91 KVAANLV---RLLAYNNKNFLQTGLIVGGWDKYEGGQIYGVPLGGTTVQQPFAIGGSGSS 147
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA DLVK + A RD +G + V++N
Sbjct: 148 YLYGFFDQAWKEG-------------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIIN 194
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 195 SEGVTRNF 202
>gi|124505797|ref|XP_001351012.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
gi|23510655|emb|CAD49040.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
Length = 204
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
++ +S +SKI K+ + + SG D++ L ++L R +Y+ + + +M +L
Sbjct: 20 FTTVSTKFSKIFKMNNNVYVGLSGLATDIQTLYEILRYRVNLYEVRQDAEMDVECFANML 79
Query: 65 SNTLYYKRFFPYYSFNVLGG------LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
S+ LY RF PY+ ++ G +D EG+ V + +Y+ +G +
Sbjct: 80 SSILYSNRFSPYFVNPIVVGFKLKHYVDEEGEKKVNYEPYLTAYDLIGAKCETR------ 133
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
F+ N + S + V E + + C SA +RD +G E++VL +
Sbjct: 134 DFVVNGVTSEQLFGMCESLYVKDQDENGLFETISQCLLSALDRDCISGWGAEVLVLTPEK 193
Query: 179 IHREYMELRKD 189
I ++ ++ R D
Sbjct: 194 IIKKKLKARMD 204
>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
Length = 213
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M A L+S
Sbjct: 44 VATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQAFASLVSAL 103
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + + T D +G+ E
Sbjct: 104 LYEKRFGPYFCQPVIAGLGDNDEPFICTMDCIGAKE 139
>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380244|sp|O43063.1|PSB1_SCHPO RecName: Full=Probable proteasome subunit beta type-1; Flags:
Precursor
gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe]
Length = 226
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 14/185 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I +R K+ +L D SG AD + + LL +Y+ Q S
Sbjct: 45 TMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAA 104
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L S Y + ++ G D + G VY+ GS + + GSGS I F
Sbjct: 105 TLASEMCYQNKNMLSAGL-IVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFC 163
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +++ EAV+ +K A A ERD +G + +V+LNKDG+ R
Sbjct: 164 DANFREN-------------MTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMER 210
Query: 182 EYMEL 186
++ +
Sbjct: 211 KFFAI 215
>gi|389581871|dbj|GAB64592.1| 20S proteasome subunit beta-3 [Plasmodium cynomolgi strain B]
Length = 204
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ ++ +S +++KI K+ D + SG D++ L +LL R +Y+ + M
Sbjct: 17 ANNFTTISTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVNLYEIRQESPMDIDCFA 76
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+LS+ LY RF PY+ F V +D+EGK + +Y+ +G + +
Sbjct: 77 NMLSSILYANRFSPYFVNPIVVGFRVKHTIDDEGKKISTFEPYLTAYDLIGAKCETN--- 133
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
F+ N + + + + + + C SA +RD +G E+ VL
Sbjct: 134 ---DFVVNGVTGEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCLSGWGAEVYVLT 190
Query: 176 KDGIHREYMELRKD 189
D I ++ ++ R D
Sbjct: 191 PDTIMKKKLKARMD 204
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNLKAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L FF +LGG+D +G G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGAFFVVQP--ILGGVDEDG-GHIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + L+ EA + +A ERD+ +G+ + I V+ +G+
Sbjct: 187 EREYSD-------------DLTVDEAKQVATNAIRAAVERDLASGNGINIAVVTDEGV 231
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + + LS EA + SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEFED-------------GLSIEEAKGVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D ++L ++++A I++ + M+ +
Sbjct: 35 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRIISAEAKIHKMRTGNNMTPLSCT 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
L+SN L+ R +P + +LGG D +++ D VG E +++ GSGS
Sbjct: 95 TLISNVLHGNRHYPLLTQLILGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + +S + AV LS SA +RD Y+G+ + + +NKDG+
Sbjct: 155 LEAEYRSDVTIDKGLLVAVKALS-------------SAMQRDAYSGNGISLAHINKDGV 200
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + + +G + + L L A +Y+ + K MS A+
Sbjct: 70 SLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTLKAETSLYETRRGKDMSMEALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG +Y+ DA+G Y+ GSGS + L
Sbjct: 130 TLTGNLLRSGAF--YIVQPILGGVDDEGS-HIYSIDALGGTTEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + D VT EA + SA ERD+ +G+ + + V+ DG+
Sbjct: 187 EQEY----------DDDVTV---DEAKTMAAKAIQSAVERDLASGNGINVAVVTDDGV 231
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ ++ ++ + + G D + + L +Y+ Q N+QM+ LLS T
Sbjct: 35 VSIDFERVFEMGPRLFVGLPGLATDTITVSQKLRFDMNLYELQENRQMTPKTFATLLSGT 94
Query: 68 LYYKRFFPYYSFNVLGGLD-NEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ V+ G+D + V D +GS E V + G+ +
Sbjct: 95 LYEKRFGPYFIEPVVAGMDPKTNEPYVACMDLIGSTTETVDFVVSGTAE-------EEAY 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
L P + E + + C +A +RD +G +++ V+ KD + Y++
Sbjct: 148 GMCETLWRPG------MKPDELFECISQCVLNAMDRDAISGWGVKVHVMEKDKVTTRYLK 201
Query: 186 LRKD 189
R D
Sbjct: 202 TRMD 205
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + + LS EA + SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEFED-------------GLSIEEAKGVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + + LS EA + SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEFED-------------GLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSLRAEVRLYEARRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRSGGF--YVVQPILGGVDETGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + + LS EA + SA ERD+ +G+ + I V+ +DG+
Sbjct: 187 EQEFED-------------GLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTEDGV 231
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
LS ++ KI +L DK + +G DV L + ++ +Y+ + +++ + L+S+T
Sbjct: 36 LSNNFEKIFQLGDKTFLGLTGLATDVITLSETFRFKNNLYKLREEREIEPTTLANLVSST 95
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ ++ GLD++ K + +D +G + + G+ S + ++ L
Sbjct: 96 LYEKRFGPYFVGPIVAGLDSKTNKPFICGFDLIGCIDFAKDFIVSGTASDQLYGMCES-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S++ +A +RD +G + ++ KD + + ++
Sbjct: 155 YEPN---LEPEDLFETISQS---------LLNAVDRDALSGWGAVVYIVTKDNVTKRVLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|365759936|gb|EHN01692.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840755|gb|EJT43449.1| PRE3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 193
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 18 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGPPSTETAAS 77
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 78 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPIGGSVHKLPYAIAGSGSTFIYGYC 135
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL DG+ R
Sbjct: 136 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTADGVER 182
>gi|425770055|gb|EKV08530.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
gi|425771747|gb|EKV10184.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
Length = 260
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPAMG 61
Y L+R D ++ K DK ++ G +D++ L +LL + + + H ++ +
Sbjct: 62 YGSLARFSDVKRLRKFGDKAIVGFGGDVSDMQYLDRLLDSMDIKENYSPHGNMLNAKNLH 121
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ Y +R F P ++ ++ G D +G+ + + D +G+ + + G G+ L +P
Sbjct: 122 TYLAKVFYKRRSEFNPLWNHVLVAGFDAQGEPFLSSADLLGTTFSAPHLATGFGAHLAVP 181
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L + +PL +S+ +A++ +K C RD + DK I V+ KDGI
Sbjct: 182 ILRRKFPEGTPL--------EQVSKEDAIEALKECLKVLFYRDARSTDKYSIAVITKDGI 233
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ ++ ++ K+ ++ D ++ +G DV+ +L+ + +Y+ + NK M L+
Sbjct: 33 FQTVATNFQKVFRIQDNILLGLTGLATDVQTFHRLIQYKVNLYRLRENKDMKVNTFVNLI 92
Query: 65 SNTLYYKRFFPYYSFNVLGGLD-NEGKGCV---YTYDAVGSYERVG-YSSQGSGSTLIMP 119
S TLY KR+ PY+ ++ GL+ +E KG + TYD++G G + G+G+
Sbjct: 93 SATLYEKRWGPYFVSPIVAGLEYDEVKGVIPITATYDSIGCTSIEGEFQVGGTGA----- 147
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
D + S L E D+V ++ +RDI +G + L KD +
Sbjct: 148 --DGLIGSCESFWRKG------LKPDELEDIVAQSLSAGCDRDILSGWGGVVYTLTKDNL 199
Query: 180 HREYMELRK 188
+ ++ ++
Sbjct: 200 SVKVLKTKQ 208
>gi|355714010|gb|AES04859.1| proteasome subunit, beta type, 1 [Mustela putorius furo]
Length = 76
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 111 GSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKL 169
GS S ++ P LDNQ+ + Q+ PLS A+ LVK F SA ERD+YTGD L
Sbjct: 3 GSASAMLQPLLDNQVGFKN-----TQNVEHVPLSLDRAMRLVKDVFVSAAERDVYTGDAL 57
Query: 170 EIVVLNKDGIHREYMELRK 188
I ++ K+GI E + LRK
Sbjct: 58 RICIVTKEGIREETVPLRK 76
>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D + SG DV+ L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 127
LY KRF P+ V+ GL ++ K + T D++G+ E L F+ + S
Sbjct: 95 LYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKE------------LAKDFVVSGTAS 142
Query: 128 PSPLLLPAQDAV-TPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
S L A +A+ P EAE + + + S+ +RD +G + V+ + + ++
Sbjct: 143 ES--LYGACEAMYKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPNEVKERILK 200
Query: 186 LRKD 189
R D
Sbjct: 201 GRMD 204
>gi|346465029|gb|AEO32359.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 34 STGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLEQPATV 89
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y+ G+ R ++ GSGS+
Sbjct: 90 KVAANLI---RLLSYQNKNMLQTGLIVGGWDKYEGGQIYSVPLGGTILRQPFTIGGSGSS 146
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +S+ EA LV + A RD +G + V++N
Sbjct: 147 YLYGFFDQAWKE-------------GMSKDEAEKLVVKAVSLAIARDGASGGVVRTVIIN 193
Query: 176 KDGIHRE 182
DG+ R
Sbjct: 194 SDGVTRN 200
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI ++ D + ++G D + + +L++ +Y+ + + M+ +
Sbjct: 30 TMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQIVRLISVESRLYKMRRQETMTIKGIT 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPF 120
LLSN L +R++P ++GG+D +G +Y+ DA+G E + GSGS +
Sbjct: 90 TLLSNLLSGQRYYPLMVQLLIGGVDKKGPN-LYSLDALGGMIEETNAVATGSGSPIAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ T +S E DL +A +RD +G+ +++V + +
Sbjct: 149 LEDRYH-------------TDMSIEEGADLAIRALHNAMKRDSASGNGIDVVCITDE--- 192
Query: 181 REYMELRKD 189
YM + +D
Sbjct: 193 -NYMHMEED 200
>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
Length = 255
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I +++ K+ ++ ++ SG ++ + L A +Y+ + + MS A+ +
Sbjct: 84 GRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRSLRAEANLYEARRGEYMSIDALSTM 143
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
SN L FF +LGG+D++G G V++ D GS Y++QGSG MP+
Sbjct: 144 ASNLLRGGPFFRVVP--ILGGVDDDG-GHVFSLDPAGSSMSDTYTAQGSG----MPYALG 196
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI---- 179
L+ Q+ L+ A+A + SA+ERD +G+ + I + DG+
Sbjct: 197 VLE---------QEYSEDLTMADAEQVAAHAVKSASERDTASGNGIHITKITHDGLTTVG 247
Query: 180 HREY 183
H+E+
Sbjct: 248 HKEF 251
>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 37 STGIYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV--RYFL--HQHTIQLGQPATV 92
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G +Y G+ + ++ GSGST
Sbjct: 93 KVAANLV---RLLSYSNKNMLQTGMIIGGWDKYEGGKIYGVPLGGTLLELPFTIGGSGST 149
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V +N
Sbjct: 150 YLYGFFDQAWKE-------------GMTQEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 196
Query: 176 KDGIHREY 183
+G+ R+Y
Sbjct: 197 SEGVTRKY 204
>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
gi|302595858|sp|B0R4C8.1|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595910|sp|Q9HR36.2|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
Length = 243
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I +++ K+ ++ ++ SG ++ + L A +Y+ + + MS A+ +
Sbjct: 72 GRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRSLRAEANLYEARRGEYMSIDALSTM 131
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
SN L FF +LGG+D++G G V++ D GS Y++QGSG MP+
Sbjct: 132 ASNLLRGGPFFRVVP--ILGGVDDDG-GHVFSLDPAGSSMSDTYTAQGSG----MPYALG 184
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI---- 179
L+ Q+ L+ A+A + SA+ERD +G+ + I + DG+
Sbjct: 185 VLE---------QEYSEDLTMADAEQVAAHAVKSASERDTASGNGIHITKITHDGLTTVG 235
Query: 180 HREYMEL 186
H+E+ L
Sbjct: 236 HKEFDAL 242
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
L+ ++ KI + DK + +G +DV L ++ ++ +Y+ + +Q+ + L+S+T
Sbjct: 36 LANNFEKIFQFGDKTFLGLTGLASDVTTLSEVFRFKNNLYKLREERQIEPKTLANLVSST 95
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ ++ GLD++ K + +D +G + + G+ + + ++ L
Sbjct: 96 LYEKRFGPYFIGPIVAGLDSKTSKPFICGFDLIGCIDFAKDFIVSGTATDQLYGMCES-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S+A +A +RD +G + V+ KD + + +
Sbjct: 155 YEPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAIVYVVTKDKVVKRVLR 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|302501488|ref|XP_003012736.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
gi|291176296|gb|EFE32096.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 24/187 (12%)
Query: 3 TGYSILSRDYSKIIKLADKCVMASS---GFQADVKALQ---KLLAARHLI--YQHQHNKQ 54
TG S+++ +K D V+AS GF DV +Q ++L + + Y
Sbjct: 39 TGTSVIA------VKFKDGVVIASDNLVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHS 92
Query: 55 MSCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
++ + LS LY +R F P ++ ++ GLD+EGK + + D +G+ + G
Sbjct: 93 LNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGF 152
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 172
G+ L +P L L P ++ + +++ +AVD +K C RD + D+ I
Sbjct: 153 GAHLAVPILRR--------LFPEENGIDNITKEQAVDAMKQCMRVLFYRDARSSDRYSIA 204
Query: 173 VLNKDGI 179
V+ KDG+
Sbjct: 205 VVTKDGV 211
>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
Length = 204
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDNNEPFICTMDCIGAKE 130
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + KI K+ + +G AD ++L K L A +Y+ ++++++S A
Sbjct: 30 SMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSERISIEAAA 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +N L+ RF+P+ +LGG+D G +Y+ D G + S GSGS + L
Sbjct: 90 ALAANILHSSRFYPFIVQTLLGGVDETG-AKIYSLDPSGGMIPDRFVSTGSGSPVAYGVL 148
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
+++ L +A+D+ SA ERD Y+G+ + + + ++
Sbjct: 149 EDRYAD-------------ELYVDDAIDIAIRAIKSAMERDTYSGNGILVATVTEE 191
>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
Length = 205
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S DY K+ ++ DKC + SG D + L + + RH +Y+ + + MS + L++N
Sbjct: 35 ISNDYPKVYRVNDKCFIGISGLVTDAQTLHQKIVFRHNLYKLREERDMSPKVVTNLIANM 94
Query: 68 LYYKRFFPYYSFNVLGGLD 86
LY KRF PY++ ++ GL+
Sbjct: 95 LYEKRFGPYFTEPLICGLE 113
>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
thaliana]
Length = 191
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D + SG DV+ L + L RH +YQ + + M L+S
Sbjct: 22 IATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 81
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF P+ V+ GL ++ K + T D++G+ E
Sbjct: 82 LYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKE 117
>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
proteasome beta subunit C-2
gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
Length = 204
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ D + SG DV+ L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF P+ V+ GL ++ K + T D++G+ E
Sbjct: 95 LYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKE 130
>gi|358388830|gb|EHK26423.1| hypothetical protein TRIVIDRAFT_86444 [Trichoderma virens Gv29-8]
Length = 261
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ AD ++ GF D+ +Q L RHLI Y+ ++
Sbjct: 62 YGSLARFTDVKRLRPFADSSIL---GFSGDISDMQYL--DRHLIDLSLSEAYESPDKPRL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + LS LY +R F P ++ ++GGLD+ G+ + D +GS + G G
Sbjct: 117 NAANLHRYLSKLLYNRRSKFDPLWNHLLVGGLDDNGEPFLAAADLLGSTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + +P +++ LS EA+++VK RD + D + V
Sbjct: 177 AMLAQPIMRR--------YVPDEESAKKLSREEAINIVKEAMKVLFYRDARSLDSYSLAV 228
Query: 174 LNKDGIHREYMELRKD 189
+ KDG+ EL++D
Sbjct: 229 VTKDGV-----ELKED 239
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
S ++ +Y K+ K+ D ++A SG +D+ L+ +Y + N++M L++
Sbjct: 34 STITTNYQKVFKIQDNILLALSGLNSDIHTFYALMEKEINLYNLKENRKMKPSTFANLVA 93
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 100
++LY +RF P++ ++ GL+N GK + TYD++G
Sbjct: 94 SSLYERRFGPFFVTPIVAGLEN-GKPILATYDSIG 127
>gi|388508100|gb|AFK42116.1| unknown [Lotus japonicus]
Length = 233
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 35 STGVYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATV 90
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G ++ G+ + ++ GSGS+
Sbjct: 91 KVAANLV---RLLSYNNKNFLETGLIVGGWDKYEGGQIFGVPLGGTIVQQPFAIGGSGSS 147
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA DLVK + A RD +G + V++N
Sbjct: 148 YLYGFFDQAWKDG-------------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIIN 194
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 195 SEGVTRNF 202
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D ++L ++++A +Y+ + + +
Sbjct: 35 TMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRIISAEANLYKLRTGNNIPPHSCA 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
LLSN L+ R FP+ ++GG D +++ DAVG E +++ GSGS
Sbjct: 95 MLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSLDAVGGLNEETSFTATGSGSPTAFGV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + K + A+ L+ +A +RD ++G+ + + V++K+G+
Sbjct: 155 LEEEYKKDMTINKGKLLAIKSLT-------------AAMKRDAFSGNGISLAVIDKNGV 200
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 15/187 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + ++ KI+ + D + ++G AD++ L +L + N+ + A+
Sbjct: 32 SEGFFVANKMVRKILYITDNIGITTAGSVADLQFLYYVLKNLYHYNYISGNRPTTVKALA 91
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+NTL ++FPY ++GG D + + +Y D G Y + GSGS + M L
Sbjct: 92 TYLANTLSQNKYFPYLVQILIGGYDTQPR--LYNLDYFGDMTEEKYVATGSGSPVAMGVL 149
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+++ + L+ +A+D+ SA +RD YTG + + + K G
Sbjct: 150 EDEYRE-------------DLTADQAMDIAARAVLSAIKRDSYTGTGVIVSKITKTGHVE 196
Query: 182 EYMELRK 188
+ + LRK
Sbjct: 197 KEVYLRK 203
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPA 59
+ G + + KI+++ M SG AD + L + A+++ Y+ + K++S A
Sbjct: 28 TAGPMVYHKRVRKIMEITPYAAMTISGLVADAQFLVE--NAKYIAKDYELKMGKRISIDA 85
Query: 60 MGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
+ +S L Y RF P+ +LGG+D+EG +Y D GS R + S GSGS +
Sbjct: 86 LASRISLILSAYLRFSPFIVQLLLGGVDHEGP-KLYYMDLYGSVSRERFMSTGSGSPVAF 144
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+ + L+ EA +L +SA RD +TG+ ++IVV+ +G
Sbjct: 145 GVLEQGYREG-------------LTLEEAKELAFKAVSSAIMRDSFTGEGVDIVVIGPEG 191
Query: 179 IHREYMELRK 188
I E +K
Sbjct: 192 ISEETRLFKK 201
>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
Length = 204
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 VATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIGAKE 130
>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ K+ ++ DKC + SG D + L + L RH +Y+ + + MS + LL+N
Sbjct: 35 ISNDFPKVYRINDKCFVGISGLVTDAQTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNM 94
Query: 68 LYYKRFFPYYSFNVLGGLD 86
LY KRF PY++ ++ GL+
Sbjct: 95 LYEKRFGPYFTEPLICGLE 113
>gi|406605482|emb|CCH43126.1| putative proteasome subunit beta type-6 [Wickerhamomyces ciferrii]
Length = 236
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 14 KIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRF 73
K+ ++ DK SG AD +A+ ++ +Y QH K S LL Y +
Sbjct: 69 KLTQINDKIWCCRSGSAADTQAVADIVKYHLELYTAQHGKPPSAKIAASLLQELTYTNKD 128
Query: 74 FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 133
++ G D G VY+ GS + ++ GSGS+ I + D K
Sbjct: 129 ALTAGL-IVAGYDERSNGEVYSIPLGGSIHKQPFAIAGSGSSYIYGWTDENYKED----- 182
Query: 134 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
++ EAVD VKT A + D +G + V+L KDGI R
Sbjct: 183 --------FTKEEAVDFVKTALTQAIQWDGSSGGVIRQVILTKDGIER 222
>gi|195629028|gb|ACG36246.1| proteasome subunit beta type 6 precursor [Zea mays]
gi|413953290|gb|AFW85939.1| proteasome subunit beta type [Zea mays]
Length = 243
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 43 STGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYI--RYFL--HQHTIQLGQPATV 98
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ + ++ GSGS+
Sbjct: 99 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSS 155
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 156 YLYALLDHEWKE-------------GMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTIN 202
Query: 176 KDGIHREY 183
DG+ R +
Sbjct: 203 ADGVKRNF 210
>gi|116779982|gb|ABK21503.1| unknown [Picea sitchensis]
Length = 233
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 34 STGMYVANRASDKITQLTDNVYLCRSGSAADSQVVSDYV--RYFL--HQHIIQLGQPATV 89
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N L GG D G +Y G+ ++ ++ GSGS+
Sbjct: 90 KVTANLI---RLLSYNNKNTLETGLIVGGWDKYEGGSIYGVPLGGTMLQLPFAIGGSGSS 146
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ FLD K +S+ EA LV + A RD +G + VV+N
Sbjct: 147 YLYGFLDQAWKE-------------GMSKDEAEALVVKSVSLAIARDGASGGVVRTVVIN 193
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 194 SEGVTRNF 201
>gi|296051291|gb|ADG86642.1| 20S proteasome subunit PBA1 [Populus tomentosa]
Length = 237
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 37 STGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV--RYFL--HQHTIQLGQPATV 92
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G +Y G+ + ++ GSGS+
Sbjct: 93 KVAANLV---RLLSYNNKNFLQTGMIVGGWDKHEGGKIYGVPLGGTLLELPFTIGGSGSS 149
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K D +T + EA LV + A RD +G + V +N
Sbjct: 150 YLYGFFDQAWK----------DGMT---QEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 196
Query: 176 KDGIHREY 183
+G+ R+Y
Sbjct: 197 SEGVSRKY 204
>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
Length = 187
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + +G D + + + L RH +YQ + + M L+S
Sbjct: 18 IATDFQRIYKIHDKLSIGLAGLATDSQTMYQRLVFRHKLYQLREERDMKPQTFASLVSAL 77
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ K + T D++G+ E
Sbjct: 78 LYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKE 113
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
S ++ +Y K+ K+ D ++A SG +D+ L+ +Y + N++M L++
Sbjct: 34 STITTNYQKVFKIQDNILLALSGLNSDIHTFYALMEKEINLYNLKENRKMKPTTFANLVA 93
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 100
+ LY +RF P++ ++ GL+N GK + TYD++G
Sbjct: 94 SALYERRFGPFFVTPIVAGLEN-GKPILATYDSIG 127
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G+ I S KI ++AD+ + ++G D ++L +++ +Y Q + M+ L
Sbjct: 2 GHFIASTTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSL 61
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLD 122
LSN L +R+FP+ +LGG+D +G +++ DA+ GS + + GSGS L+
Sbjct: 62 LSNVLASRRYFPFMVQLLLGGVDKKGP-QLFSLDALGGSIQEQKVVATGSGSPTAYGVLE 120
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L P ++ E + L +A +RD +GD ++ V + G
Sbjct: 121 -ALYDPE------------MTVEEGMKLGVRAIHNAMKRDSASGDVIQAVKITAGG 163
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 20/189 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + S++ K+ ++ + +G + ++L + + A +Y+ + + MS A+
Sbjct: 70 SLGHMVSSKNVQKVEEIHPTGALTIAGSVSAAQSLIRSIRAEVRLYESRRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LL N L F Y +LGG D+EG +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLLGNFLRSGAF--YIVQPILGGFDDEG-AHIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI-- 179
+ Q+ LS EA SA ERD+ +G+ + + V+ +DG+
Sbjct: 187 E-------------QEYSNDLSIEEAKTTAARAIKSAVERDLASGNGINVCVVTEDGVEI 233
Query: 180 --HREYMEL 186
H+++ ++
Sbjct: 234 TQHKDFEDV 242
>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
Length = 204
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + M L+S+
Sbjct: 35 IATDFQRISKIHDKLFIGLSGLATDSQTLYQRLVFRHKLYQLREECDMKPETFASLVSSM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
Y KRF PY+ V+ GL ++ K + T DA+G+ E
Sbjct: 95 QYEKRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKE 130
>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
Length = 204
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDDVPFICTMDCIGAKE 130
>gi|194701304|gb|ACF84736.1| unknown [Zea mays]
gi|194701404|gb|ACF84786.1| unknown [Zea mays]
gi|413942810|gb|AFW75459.1| proteasome subunit beta type [Zea mays]
Length = 244
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 44 STGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATV 99
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ + ++ GSGS+
Sbjct: 100 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSS 156
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 157 YLYALLDHEWKE-------------GMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTIN 203
Query: 176 KDGIHREY 183
DG+ R +
Sbjct: 204 ADGVKRNF 211
>gi|242094606|ref|XP_002437793.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
gi|241916016|gb|EER89160.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
Length = 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 45 STGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATV 100
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ + ++ GSGS+
Sbjct: 101 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSS 157
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 158 YLYALLDHEWKE-------------GMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTIN 204
Query: 176 KDGIHREY 183
DG+ R +
Sbjct: 205 ADGVKRNF 212
>gi|242079721|ref|XP_002444629.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
gi|241940979|gb|EES14124.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
Length = 245
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 45 STGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATV 100
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ + ++ GSGS+
Sbjct: 101 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSS 157
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 158 YLYALLDHEWKE-------------GMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTIN 204
Query: 176 KDGIHREY 183
DG+ R +
Sbjct: 205 ADGVKRNF 212
>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
Length = 242
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I SR +KI + D V+ SG AD +A+ + +Y NK ++
Sbjct: 47 SAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSS 106
Query: 62 QLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+ LY R S +VL G D+E G VY G R ++ GSGST + F
Sbjct: 107 QIFRQFLYNYR--EQLSASVLVAGWDSELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGF 164
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LD+Q + P L L E +A+ VK AT RD +G + + V++K G
Sbjct: 165 LDSQWR---PDLT--------LEECKAI--VKQAVGLATFRDGSSGGVVRLAVIDKTG 209
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY ++S+ K+ K+++ A +G AD++ + K + A +Y+ + + S + ++
Sbjct: 40 GYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEVTAVVNLYRLEQGVEPSVKTVAKI 99
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS L+ R+FPY+ ++GG+D++G V D +GS Y+ G+G+ + + ++N
Sbjct: 100 LSWNLFGNRYFPYFMETIVGGIDSQGP-HVIVLDPLGSMIEDDYAVVGTGAEVAVGVIEN 158
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + ++ KI+ + D+ M ++G AD++ + + + N+ ++ ++
Sbjct: 42 SAGFFVANKMVRKIVYIDDRIGMTTAGSVADLQFIYNYMKNIYHYNLISGNRPVTVKSLA 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+N L ++FPY ++GG D + + ++ D +G Y + GSGS + M L
Sbjct: 102 TYLTNILSQNKYFPYLVQILMGGYDTQPR--LFNLDYLGDMTEETYVATGSGSPVAMGVL 159
Query: 122 DNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-I 179
+D +P L+ +A+DL SA +RD +TG + + + K+G +
Sbjct: 160 --------------EDGYSPDLTGDQAMDLAARAVMSAIKRDSFTGTGVIVTKITKEGHV 205
Query: 180 HREYMELRKD 189
RE RK+
Sbjct: 206 EREIYPNRKE 215
>gi|67539226|ref|XP_663387.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
gi|40743686|gb|EAA62876.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
Length = 551
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPAMG 61
Y L+R D ++ K D V+ SG +D++ + +LL + + + H Q++ +
Sbjct: 353 YGSLARFTDVKRLRKFGDAAVIGFSGDVSDMQYIDRLLESIDIRENYSVHGNQLNAKNLH 412
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
LS Y +R F P ++ ++ G D+E K + + D +G+ + + G G+ L +P
Sbjct: 413 TYLSKVFYKRRSDFNPLWNHILVAGFDSEKKPFLSSADLLGTTFSAPHLATGFGAHLAIP 472
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L L P + + +S+ +AV +K C RD + DK + ++ ++GI
Sbjct: 473 ILRR--------LFPEERPIEEISKEDAVSALKDCLKVLWYRDARSMDKYSLALITQEGI 524
>gi|226507970|ref|NP_001140374.1| uncharacterized protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 195 STGMYVANRASDKITQLTDNVYVCRSGSAADTQVISDYI--RYFL--HQHTIQLGQPATV 250
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +++ G+ + ++ GSGS+
Sbjct: 251 KVAANLI---RLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGGTILKQPFAIGGSGSS 307
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ LD++ K +S+ EA V + A RD +G + V +N
Sbjct: 308 YLYALLDHEWKE-------------GMSQEEAEKFVVKVVSLAMARDGASGGVVRTVTIN 354
Query: 176 KDGIHREY 183
DG+ R +
Sbjct: 355 ADGVKRNF 362
>gi|259484729|tpe|CBF81200.1| TPA: hypothetical proteasome beta 7 subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 260
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPAMG 61
Y L+R D ++ K D V+ SG +D++ + +LL + + + H Q++ +
Sbjct: 62 YGSLARFTDVKRLRKFGDAAVIGFSGDVSDMQYIDRLLESIDIRENYSVHGNQLNAKNLH 121
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
LS Y +R F P ++ ++ G D+E K + + D +G+ + + G G+ L +P
Sbjct: 122 TYLSKVFYKRRSDFNPLWNHILVAGFDSEKKPFLSSADLLGTTFSAPHLATGFGAHLAIP 181
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L L P + + +S+ +AV +K C RD + DK + ++ ++GI
Sbjct: 182 ILRR--------LFPEERPIEEISKEDAVSALKDCLKVLWYRDARSMDKYSLALITQEGI 233
>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 204
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDNVPFICTMDCLGAKE 130
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + A C + +G DV + L R +Y+ + + +S + L+S++
Sbjct: 36 VSNNFPKIFQYAPSCYLGLTGLATDVSTVSDLFRYRVNMYRLREERNISPQTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY +RF PY+ VL G+++ GK + +D++G + + G+ S D
Sbjct: 96 LYERRFGPYFVSPVLAGINHTTGKPFICGFDSIGCIDFAKDFIVGGTAS-------DQLF 148
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ L P L E + V +A +RD +G + ++ KD + + ++
Sbjct: 149 GTCEGLWEP------DLEPDELFETVSQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 GRQD 206
>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
Length = 305
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + M L+S
Sbjct: 136 IATDFRRVFKVHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLMEERDMKPETFASLVSAL 195
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + + T D +G+ E
Sbjct: 196 LYEKRFGPYFCQPVIAGLGDNDEPFICTMDCIGAKE 231
>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
gi|194706600|gb|ACF87384.1| unknown [Zea mays]
Length = 204
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRVFKVHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDNVPFICTMDCLGAKE 130
>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
Length = 204
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S
Sbjct: 35 IATDFQRVFKVHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL ++ + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDDNVPFICTMDCLGAKE 130
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ KI ++ D M ++G D + L ++++ +Y+ + + ++ +
Sbjct: 30 TMGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQLVRMISVESKLYKMRRQESITIKGLT 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPF 120
LLSN L +R+FP ++GG+D G +++ DA+ G+ E + GSGS +
Sbjct: 90 TLLSNILGGQRYFPLMVQLLVGGVDKNGP-AIFSLDAMGGNIEETKAVATGSGSPMAYGV 148
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
L+++ ++ E ++L +A +RD +G+ +++V + DG
Sbjct: 149 LEDRYHE-------------GINVDEGMELAVRALYNAMKRDSASGNGIDVVKITADGYK 195
Query: 181 R 181
R
Sbjct: 196 R 196
>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
gi|194698808|gb|ACF83488.1| unknown [Zea mays]
Length = 204
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ DK + SG D + L + L RH +YQ + M L+S
Sbjct: 35 IATDFRRVFKVHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLMEERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGDNDEPFICTMDCIGAKE 130
>gi|224118628|ref|XP_002331409.1| predicted protein [Populus trichocarpa]
gi|118484942|gb|ABK94336.1| unknown [Populus trichocarpa]
gi|222873623|gb|EEF10754.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 37 STGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV--RYFL--HQHTIQLGQPATV 92
Query: 62 QLLSNTLYYKRFFPYYSFN------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N ++GG D G +Y G+ + ++ GSGS+
Sbjct: 93 KVAANLV---RMLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTLLELPFTIGGSGSS 149
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K D +T + EA LV + A RD +G + V +N
Sbjct: 150 YLYGFFDQAWK----------DGMT---QEEAEQLVVKAVSLAIARDGASGGVVRTVTIN 196
Query: 176 KDGIHREY 183
+G+ R+Y
Sbjct: 197 SEGVSRKY 204
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D +AL + ++A +Y+ + K + +
Sbjct: 31 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
L+SN L+ R FP+ + ++GG D +++ D +G E +++ GSG
Sbjct: 91 TLISNILHGNRMFPFLTQLIIGGYDLLYGPRLFSLDPIGGLNEESSFTATGSG------- 143
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
SP+ + + ++ + ++L SA ERD ++G+ + + +NK+G+
Sbjct: 144 ------SPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDAFSGNGISLAYVNKEGV 196
>gi|257222616|gb|ACV52586.1| proteasome subunit beta type-6 precursor [Nicotiana benthamiana]
Length = 175
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 2 STGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATV 57
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ +N L Y + ++GG D G +Y G+ ++ GSGS+ +
Sbjct: 58 KVAANLVRLLSYNNKAMLQTGMIIGGWDKYEGGKIYGVPLGGTLLEQPFAIGGSGSSYLY 117
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
F D + +++ EA LV T + A RD +G + V +NKDG
Sbjct: 118 GFFDQAWREG-------------MTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINKDG 164
Query: 179 IHREY 183
+ R++
Sbjct: 165 VTRKF 169
>gi|393909340|gb|EFO25921.2| proteasome A-type and B-type family protein [Loa loa]
Length = 232
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 16/188 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+G I SR KI + ++ V+ SG AD +A+ ++ +Y + ++
Sbjct: 39 SSGSYISSRATDKITPVTNRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEDVTVGRSA 98
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q+ N LY R S V G D EG G +Y G R ++ GSGST + FL
Sbjct: 99 QIFRNFLYKYRDSLSASVLVAGYDDVEG-GQLYAIPLGGYVTRQRCAASGSGSTFVQGFL 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+Q KS ++ + ++V A AT RD +G + + V++K G R
Sbjct: 158 DSQWKS-------------GMTAEKCKEIVLNAVALATIRDGSSGGVIRLAVIDKTGTQR 204
Query: 182 EYMELRKD 189
M +R D
Sbjct: 205 --MLIRPD 210
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D +AL + ++A +Y+ + K + +
Sbjct: 31 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCA 90
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGY-SSQGSGSTLIMPF 120
L+SN L+ R FP+ + ++GG D +++ D VG Y ++ GSGS
Sbjct: 91 TLMSNILHGSRMFPFLTQLIIGGYDFLYGPRLFSLDPVGGLNEESYFTATGSGSPTAYGV 150
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L +L+ +LL + ++L SA ERD ++G+ + + +NK+G+
Sbjct: 151 L--ELEYSRDMLLK-----------DGLNLSVKALMSAMERDAFSGNGISLAYVNKEGV 196
>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
Length = 204
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG D + L + L RH +YQ + M L+S
Sbjct: 35 IATDFQRISKIHDKLYIGLSGLATDSQTLYQRLVFRHKLYQLREELDMKPETFASLVSAM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
Y KRF PY+ V+ GL ++ K + T DA+G+ E
Sbjct: 95 QYEKRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKE 130
>gi|159041041|ref|YP_001540293.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595700|sp|A8MBW0.1|PSB1_CALMQ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|157919876|gb|ABW01303.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 206
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAM 60
++ GY I R KI K+ + SG ADV+ + L + Y+ H + +
Sbjct: 34 VTAGYYIAHRKGRKIWKIDNHAAATMSGAVADVQMILNELTHLAMNYRITHQAPVPIKTL 93
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMP 119
S ++Y R Y + ++GG+DNE +Y D GS+ R + S GSGS
Sbjct: 94 ANYASVVMFYSRPMIYIAHMIIGGVDNEEGPVLYAVDWYGSFTREERFMSTGSGSPTAFG 153
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L++ + +S +AV L +A D +G+ ++++ + K+
Sbjct: 154 VLEDGYRD-------------DMSLDDAVKLATRAVRAAMLHDPGSGEGVDVITITKEAG 200
Query: 180 HRE 182
+RE
Sbjct: 201 YRE 203
>gi|213407092|ref|XP_002174317.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
gi|212002364|gb|EEB08024.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
Length = 229
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 14/185 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I +R K+ +L++K SG AD +A+ +L Y+ Q+ + +
Sbjct: 45 TMGAYIANRVTDKLTQLSEKIWCCRSGSAADTQAVADILKYYLSQYRMQYGVEPTVQTAA 104
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L S Y + + ++ G D E G VY+ GS R + GSGS I F
Sbjct: 105 SLASEMCYQNKDYLTAGL-IIAGYDEETGGEVYSIPLGGSVHRQPLAIGGSGSAFIYGFC 163
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K + + A+ +K A ERD +G + +V+L K GI R
Sbjct: 164 DANFKEN-------------MDKETAIQFLKNAVGLAMERDRSSGGTIRMVILTKSGIER 210
Query: 182 EYMEL 186
++ L
Sbjct: 211 KFFAL 215
>gi|392562504|gb|EIW55684.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 208
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI ++D+ + G DV L+++ R +Y + +++ L+S+T
Sbjct: 35 ISSNFQKIFPMSDRIYLGLPGLATDVTTLKEVFRYRVNMYTIKEEREIEPETFAHLVSST 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGC----VYTYDAVGSYERV-GYSSQGSGSTLIMPFLD 122
LY KRF PY+ V+ GL+ G + D +G + G+ ST
Sbjct: 95 LYEKRFGPYFIEPVMAGLEKTPSGAYKPFIAATDLIGCLNFAKDFVVAGTAST------- 147
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTC---FASATERDIYTGDKLEIVVLNKDGI 179
L A+ P E E DL +TC +A +RD Y+G E+ ++ KD +
Sbjct: 148 -------KLYGVAEGLWEPDLEPE--DLFETCAQTLLNAVDRDAYSGWGAEVHLITKDKV 198
Query: 180 HREYMELRKD 189
+ ++ R D
Sbjct: 199 IKRTLKGRMD 208
>gi|91694273|gb|ABE41788.1| 20S proteasome subunit [Trichoderma harzianum]
Length = 261
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ AD ++ GF D+ +Q L RHLI Y+ ++
Sbjct: 62 YGSLARFTDVKRLRTFADSSIV---GFSGDISDMQYL--DRHLIDLSLSEAYESPDKPRL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + LS LY +R F P ++ ++GGLD+ G+ + D +GS + G G
Sbjct: 117 NAANLHRYLSKLLYNRRSKFDPLWNHLLIGGLDDNGEPFLAAADLLGSTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + +P +++ LS EA+++VK RD + D + V
Sbjct: 177 AMLAQPIMRR--------YVPDEESAKKLSREEAINIVKEAMKVLFYRDARSLDSYSLAV 228
Query: 174 LNKDGIHREYMELRKD 189
+ K+G+ EL++D
Sbjct: 229 VTKEGV-----ELKQD 239
>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-3-A-like [Glycine max]
Length = 204
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 14/180 (7%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
D+ +I K+ DK + G D + L + L H +YQ + + M L+S LY
Sbjct: 38 DFQRISKIHDKLFIGLXGLATDAQTLYQRLLFGHKLYQLREERDMKPQTFASLVSAILYE 97
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPS 129
RF PY+ V+ GL ++ K + T DA+G+ E ++ G+ S + ++ K
Sbjct: 98 NRFGPYFCQPVIAGLGDDDKPFICTMDAIGAKELAKDFAVAGTASESLYGACESMFK--- 154
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
P + P E +++ S+ +RD +G I V+ + ++ R D
Sbjct: 155 PDMEP----------EELFEMISQALLSSVDRDCLSGWGGHIYVVTPTEVKERILKGRMD 204
>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ K+ K+ + + +GF ADV + L R +Y+ + + +M+ A +LSN
Sbjct: 34 IAGDFKKVFKVGPRMFLGLTGFLADVNTVWDRLQYRQNLYEIKESCEMTPEAFTTMLSNL 93
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVG------SYERVGYSSQ---GSGSTLI 117
LY RF PY+ V+ LD + + + D +G S+ G + G TL
Sbjct: 94 LYEHRFGPYHVQAVVAALDPLALRPYICSVDLIGAPTKKDSFVFCGSCDKQLCGMCETLW 153
Query: 118 MPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
P LD P L L +T A +R+I G + VL+KD
Sbjct: 154 TPNLD-----PEQLFLTMSQTLT----------------HAFDRNITCGWGATVFVLDKD 192
Query: 178 GIHREYMELRKD 189
I +++RKD
Sbjct: 193 KIMERVIDVRKD 204
>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
Length = 204
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 31/192 (16%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ K+ K+ + + +GF ADV + L R +Y+ + + +M+ A +LSN
Sbjct: 34 IAGDFKKVFKVGPRMFLGLTGFLADVNTVWDRLQYRQNLYEIKESCEMTPEAFTTMLSNL 93
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVG------SYERVGYSSQ---GSGSTLI 117
LY RF PY+ V+ LD + + + D +G S+ G + G TL
Sbjct: 94 LYEHRFGPYHVQAVVAALDPLALRPYICSVDLIGAPTKKDSFVFCGSCDKQLCGMCETLW 153
Query: 118 MPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
P LD P L L +T A +R+I G + VL+KD
Sbjct: 154 TPNLD-----PEQLFLTMSQTLT----------------HAFDRNITCGWGATVFVLDKD 192
Query: 178 GIHREYMELRKD 189
I +++RKD
Sbjct: 193 KIMERVIDVRKD 204
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ + + +G AD + + +L +++ + +S ++
Sbjct: 33 SAGYFIANNNTMKIQKIDEHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + ++GG D G ++ D GS E+ Y + GSGS + L
Sbjct: 93 RLCSLIFHQNRGYPFMADILVGGYDANGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGLL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+ + + L+ EA + +A R+I TGD + I V++KDG
Sbjct: 152 EEEYRP-------------DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195
>gi|449442012|ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
gi|449499516|ref|XP_004160837.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
Length = 235
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI KL D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 35 STGVYVANRASDKITKLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATV 90
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 91 KVAANLV---RLLAYSNKNMLQTGLIVGGWDKYDGGRIYGIPLGGTIIEQPFAIGGSGSS 147
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +S EA LV + A RD +G + V +N
Sbjct: 148 YLYGFFDQAWKE-------------EMSREEAEQLVVKAVSLAIARDGASGGVVRTVTIN 194
Query: 176 KDGIHREY 183
+G+ R++
Sbjct: 195 SEGVTRKF 202
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ + +G AD + + +L +++ + +S ++
Sbjct: 33 SAGYFIANNNTMKIQKIDAHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + ++GG D G ++ D GS E+ Y + GSGS + L
Sbjct: 93 RLCSLIFHQNRGYPFMADILVGGYDANGP-ALFNIDMFGSVEQKSYVTTGSGSPVAYGLL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+ + +S L+ EA + +A R+I TGD + I V++KDG
Sbjct: 152 EEEYRS-------------DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 18/190 (9%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y L+ D +K+ K+ D+ + +G D + + L R +Y + + + + G+++
Sbjct: 32 YQTLATDKTKVYKMHDQLFIGLAGLATDQQTFYERLKFRLAMYSLREERLIKPASFGKMV 91
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-----YERVGYSSQGSGSTLIMP 119
S LY KRF PY+ V+ GLD E K +++ D +G+ + G+ G+ + +M
Sbjct: 92 STLLYEKRFGPYFIEPVIAGLDKENKPYLFSSDFIGAPLLPDMDTNGFVVAGTCTEQLMG 151
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
++ + L E + V C + +RD +G + ++ D +
Sbjct: 152 MCESMWRK-------------DLEPEELFETVSQCLLAGQDRDCLSGWGAVVHIICPDRV 198
Query: 180 HREYMELRKD 189
+ R D
Sbjct: 199 ITRTLRGRMD 208
>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 204
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ KI K+ DK ++ G DV +++LL R +Y+ + +++ L+S+
Sbjct: 35 VATDFEKIFKMGDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 127
LY KRF PY+ ++ GL + + +D +G+ G T +N
Sbjct: 95 LYQKRFGPYFVEPIVAGLKEDNTPFISAFDLIGAPVVTDDFVVGGTCT------NNLYGM 148
Query: 128 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELR 187
P D + E + + C ++ +RD +G + ++ +GI + ++ R
Sbjct: 149 CESFYRPDMD------KDELFETMAQCLLTSVDRDALSGWGGVVHIITPEGIMSKTLKGR 202
Query: 188 KD 189
+D
Sbjct: 203 QD 204
>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
Length = 276
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I S+ K+I++ + +G AD +++LA R +Y+ ++ +++S A
Sbjct: 94 SMGSYIGSQTVKKVIEINPYLLGTMAGGAADCSFWERVLAERCRVYELRNKERISVAAAS 153
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL+N +YY + ++ G D G G Y D+ G+ S GSGST L
Sbjct: 154 KLLANMVYYYKGMGLSMGTMICGWDKRGPGLYYV-DSDGTRMTNYMFSVGSGSTYAYGIL 212
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K L + EA DL + AT RD Y+G + + + + G
Sbjct: 213 DSGFKH-------------DLEDEEAYDLARRAIFHATHRDAYSGGSVNLYHVKETG 256
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 22/184 (11%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH---NKQMSCP 58
S G+ + ++ KI+ + ++ + ++G AD++ + L IY + + N+ ++
Sbjct: 39 SAGFFVANKMVRKILYIDERIGITTAGSVADLQFIYNYLKN---IYHYNYISGNRPVTVK 95
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
A+ L+N L ++FPY ++GG D + + ++ D +G Y + GSGS + M
Sbjct: 96 ALATYLTNILSQSKYFPYLVQILIGGYDVQPR--LFNLDYLGDMTEETYVATGSGSPVAM 153
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L++ + PS ++ EAV+L SA +RD +TG + + + KDG
Sbjct: 154 GVLEDGYR-PS------------MTPDEAVELATRAVLSAIKRDSFTGTGVIVTKITKDG 200
Query: 179 IHRE 182
H+E
Sbjct: 201 -HQE 203
>gi|345004933|ref|YP_004807786.1| proteasome endopeptidase complex subunit beta [halophilic archaeon
DL31]
gi|344320559|gb|AEN05413.1| proteasome endopeptidase complex, beta subunit [halophilic archaeon
DL31]
Length = 242
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ + S+D K+ ++ + +G + + L + L A +++ + K+MS A+
Sbjct: 69 SLGHMVSSKDVQKVEQVHPHGALTIAGSVSAAQNLIETLRAESNLFEVRRGKEMSMQALS 128
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L F Y +LGG+D+EG VY+ DA+G Y+ GSGS + L
Sbjct: 129 TLTGNLLRSGAF--YIVSPILGGVDSEGS-HVYSIDALGGTTEEDYAVSGSGSQFALGVL 185
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ + L + A T ++A SA ERD +G+ + I V+ +G+
Sbjct: 186 EQEYDDD----LDIEGAKTVATKA---------IKSAMERDTASGNGINIAVVTDEGVE 231
>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 195
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP--A 59
S GY I + + KI ++ D + +G AD + + +L R+ H+ KQ P +
Sbjct: 18 SAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVL--RYHASLHRIRKQGPIPIKS 75
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+ +L S + R +P+ + ++GG D G +Y D GS E Y + GSGS +
Sbjct: 76 LARLTSLIFHQNRGYPFMADILMGGFDAVGP-ALYNIDMFGSVEEKSYVTTGSGSPVAYG 134
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + ++ L+ EA + +A R+I TGD + + V+N +G
Sbjct: 135 TLEEEYRA-------------DLTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGF 181
Query: 180 HREYMELRK 188
E +K
Sbjct: 182 ELLTREQKK 190
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPA 59
+ G + + KI ++ D + SG AD + + + AR L Y+ + K +S A
Sbjct: 28 TAGPMVYHKAVKKISRITDYAALTISGLVADAQYIVEY--ARFLARDYEAETGKPISVGA 85
Query: 60 MGQLLSNTL-YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
+ +S L Y R+ P+ +LGG D+ G +Y D GS R Y + GSGS +
Sbjct: 86 LASRISLVLSVYLRYVPFIVQLLLGGRDHTG-ASLYYMDLYGSVTREKYMATGSGSPVAF 144
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+ +S LS EA L +SA RD +TG+ +++VV+ G
Sbjct: 145 GVLEQGYRSD-------------LSLEEAKALAFKAVSSAIMRDGFTGEGVDVVVIGPQG 191
Query: 179 IHREYMELRK 188
E + L++
Sbjct: 192 YMEETIPLKR 201
>gi|62122596|dbj|BAD93264.1| PSMB8-A [Oryzias latipes]
Length = 273
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 90 STGSYIATCEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 149
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y D G+ S GSGS L
Sbjct: 150 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDDNGNRLSGRMFSTGSGSNYAYGVL 208
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K ++ EA +L + AT RD Y+G + + + +DG
Sbjct: 209 DSGYKE-------------DMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHIQEDG 252
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ KI K+ DK + SG D++ + + + +Y+ + N++MS ++SN
Sbjct: 34 ISTDFPKIFKITDKIFIGLSGLATDIQTVLNKIKYKVNMYELRENRKMSPKCFKTMVSNL 93
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLK 126
LY +RF P+++ V+ L+++G + D +G+ E Y G+ + M L
Sbjct: 94 LYERRFGPFFAEPVIVALNDDGTTMLCGMDCLGAAESPKDYVVAGTAANE-MHGLAEAYW 152
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P +PA+ E + V S +R+ +G + ++ KD I ++
Sbjct: 153 RPD---MPAE---------ELFECVSQTMLSGCDRNAASGWGATVTIVQKDKIITRKLKA 200
Query: 187 RKD 189
R D
Sbjct: 201 RMD 203
>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 192
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV + +L + +Y+ + + +S + L S+T
Sbjct: 22 VSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNMYRLREERHISPKTLANLTSST 81
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ VL G+DN GK + +D++G + + G+ S D
Sbjct: 82 LYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIGCIDFAQDFIVSGTAS-------DQLF 134
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ L P L + + + +A +RD +G + ++ KD + + ++
Sbjct: 135 GTCEGLWEP------DLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 188
Query: 186 LRKD 189
R+D
Sbjct: 189 GRQD 192
>gi|2055313|dbj|BAA19767.1| LMP7 [Oryzias latipes]
Length = 225
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 42 STGSYIATCEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 101
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y D G+ S GSGS L
Sbjct: 102 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDDNGNRLSGRMFSTGSGSNYAYGVL 160
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K ++ EA +L + AT RD Y+G + + + +DG
Sbjct: 161 DSGYKE-------------DMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHIQEDG 204
>gi|312070446|ref|XP_003138150.1| proteasome A-type and B-type family protein [Loa loa]
Length = 223
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+G I SR KI + ++ V+ SG AD +A+ ++ +Y + ++
Sbjct: 16 SSGSYISSRATDKITPVTNRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEDVTVGRSA 75
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q+ N LY R S V G D EG G +Y G R ++ GSGST + FL
Sbjct: 76 QIFRNFLYKYRDSLSASVLVAGYDDVEG-GQLYAIPLGGYVTRQRCAASGSGSTFVQGFL 134
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+Q KS ++ + ++V A AT RD +G + + V++K G R
Sbjct: 135 DSQWKS-------------GMTAEKCKEIVLNAVALATIRDGSSGGVIRLAVIDKTGTQR 181
>gi|315518887|dbj|BAJ51776.1| proteasome subunit, beta type 8 [Oryzias javanicus]
Length = 238
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 55 SAGNYISTGEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G VY D G+ S GSG++ L
Sbjct: 115 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-VYYVDDNGTRLSGRMFSTGSGNSYAYGVL 173
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K ++ EA +L + A AT RD Y+G + + + +DG
Sbjct: 174 DSGYKE-------------DMTVEEAYELGRRGIAHATHRDSYSGGVVNLYHIKEDG 217
>gi|156848022|ref|XP_001646894.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
gi|156117575|gb|EDO19036.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + + A
Sbjct: 40 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAVADIVQYHLEMYTAQYGEPSTEVAAS 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ TL Y+ + ++ G D KG VY+ GS R Y+ GSGST I +
Sbjct: 100 --IFKTLCYENKDNLTAGIIVAGYDEANKGQVYSIPLGGSVHRQPYAIAGSGSTFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +++ E ++ +K + A + D +G + +VVL KDG R
Sbjct: 158 DKNFKE-------------DMTKEETIEFMKHSLSQAIKWDGSSGGVIRMVVLTKDGAER 204
>gi|3024440|sp|P93395.1|PSB6_TOBAC RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Proteasome delta chain; AltName: Full=Tobacco
cryptogein-induced protein 7; Short=tcI 7; Flags:
Precursor
gi|1743356|emb|CAA70699.1| proteasome delta subunit [Nicotiana tabacum]
Length = 234
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 34 STGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATV 89
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ +N L Y + ++GG D G +Y G+ ++ GSGS+ +
Sbjct: 90 KVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTVLEQPFAIGGSGSSYLY 149
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
F D K +++ EA LV T + A RD +G + V +NKDG
Sbjct: 150 GFFDQAWKEG-------------MTQEEAEKLVVTAVSLAIARDGASGGVVRTVTINKDG 196
Query: 179 IHREY 183
R++
Sbjct: 197 ATRKF 201
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP--A 59
S GY I + + KI ++ D + +G AD + + +L R+ H+ KQ P +
Sbjct: 33 SAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVL--RYHASLHRIRKQGPIPIKS 90
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+ +L S + R +P+ + ++GG D G +Y D GS E Y + GSGS +
Sbjct: 91 LARLTSLIFHQNRGYPFMADILMGGFDAVGP-ALYNIDMFGSVEEKSYVTTGSGSPVAYG 149
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + ++ L+ EA + +A R+I TGD + + V+N +G
Sbjct: 150 TLEEEYRA-------------DLTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGF 196
Query: 180 HREYMELRK 188
E +K
Sbjct: 197 ELLTREQKK 205
>gi|327304495|ref|XP_003236939.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459937|gb|EGD85390.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 261
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPAM 60
Y L+R D ++ + V+ G +D++ + ++L + + Y ++ +
Sbjct: 62 YGSLARFTDLKRLRAFDNSSVVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNL 121
Query: 61 GQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
LS LY +R F P ++ ++ GLD+EGK + + D +G+ + G G+ L +
Sbjct: 122 HTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAV 181
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P L L P +D + +++ AVD +K C RD + D+ I V+ KDG
Sbjct: 182 PILRR--------LFPEEDGIDNITKERAVDAMKQCMRVLFYRDARSSDRYSIAVVTKDG 233
Query: 179 I 179
+
Sbjct: 234 V 234
>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
Length = 239
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I SR +KI + + V+ SG AD +A+ + +Y NK ++
Sbjct: 44 SAGSFITSRATNKITPITENMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSS 103
Query: 62 QLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+ LY R S +VL G D+E G VY G R ++ GSGST + F
Sbjct: 104 QIFRQFLYNYR--EQLSASVLVAGWDSELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGF 161
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LD+Q + P L L E +A+ VK AT RD +G + + V++K G
Sbjct: 162 LDSQWR---PDLT--------LDECKAI--VKQAVGLATFRDGSSGGVVRLAVIDKTG 206
>gi|219567032|dbj|BAH05034.1| proteasome subunit, beta type 8 [Oryzias dancena]
gi|224473817|gb|ACN49158.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
Length = 273
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 90 SAGNYISTGEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 149
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G VY D G+ S GSG++ L
Sbjct: 150 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-VYYVDDNGTRLSGRMFSTGSGNSYAYGVL 208
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K ++ EA +L + A AT RD Y+G + + + +DG
Sbjct: 209 DSGYKE-------------DMTIEEAYELGRRGIAHATHRDSYSGGVVNLYHIKEDG 252
>gi|170594089|ref|XP_001901796.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158590740|gb|EDP29355.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 209
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S+G I SR KI + D+ V+ SG AD +A+ ++ +Y ++++
Sbjct: 16 SSGSYISSRATDKITPVTDRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEEVTVGRSA 75
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
Q+ N LY R S V G D EG G +Y G R ++ G GST + FL
Sbjct: 76 QIFRNFLYKYRDSLSASVLVAGYDDIEG-GQLYAIPMGGYVTRQRCAASGRGSTFVQGFL 134
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D+Q K P ++ + +LV A AT RD +G + + V++K G R
Sbjct: 135 DSQWK-------PG------MTAEKCKELVLNAVALATIRDGSSGGVIRLAVIDKTGTKR 181
>gi|397594765|gb|EJK56324.1| hypothetical protein THAOC_23819, partial [Thalassiosira oceanica]
Length = 76
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 110 QGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 169
+ G+ +++P +DN + + L D L E V++VK F +A ERDIYTGD +
Sbjct: 2 RAVGAVVLIPLMDNVISHKNRL-----DERRDLPAEEVVEIVKDAFLTAGERDIYTGDAV 56
Query: 170 EIVVLNKDGIHREYMELRKD 189
+I+V+ KDGI ++ +L+ D
Sbjct: 57 DIMVITKDGIDKQTFQLKAD 76
>gi|298508229|pdb|1VSY|H Chain H, Proteasome Activator Complex
gi|298508243|pdb|1VSY|V Chain V, Proteasome Activator Complex
gi|298508445|pdb|3L5Q|B Chain B, Proteasome Activator Complex
gi|298508459|pdb|3L5Q|D Chain D, Proteasome Activator Complex
Length = 196
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 21 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS 80
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 81 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYC 138
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL G+ R
Sbjct: 139 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 185
>gi|11513426|pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513440|pdb|1G65|2 Chain 2, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11514005|pdb|1G0U|N Chain N, A Gated Channel Into The Proteasome Core Particle
gi|11514019|pdb|1G0U|2 Chain 2, A Gated Channel Into The Proteasome Core Particle
gi|14488812|pdb|1FNT|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488826|pdb|1FNT|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150390|pdb|1JD2|N Chain N, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150397|pdb|1JD2|U Chain U, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765706|pdb|1Z7Q|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765720|pdb|1Z7Q|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279381|pdb|2F16|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279395|pdb|2F16|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032215|pdb|2FAK|N Chain N, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032229|pdb|2FAK|2 Chain 2, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490856|pdb|2GPL|N Chain N, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490870|pdb|2GPL|2 Chain 2, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847473|pdb|2ZCY|N Chain N, Yeast 20s Proteasome:syringolin A-Complex
gi|178847487|pdb|2ZCY|1 Chain 1, Yeast 20s Proteasome:syringolin A-Complex
gi|178847515|pdb|3BDM|N Chain N, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847529|pdb|3BDM|1 Chain 1, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016380|pdb|3D29|N Chain N, Proteasome Inhibition By Fellutamide B
gi|190016394|pdb|3D29|2 Chain 2, Proteasome Inhibition By Fellutamide B
gi|197725334|pdb|3E47|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725348|pdb|3E47|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939225|pdb|3DY3|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939239|pdb|3DY3|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939253|pdb|3DY4|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939267|pdb|3DY4|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828250|pdb|3GPJ|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828264|pdb|3GPJ|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588334|pdb|3GPT|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588348|pdb|3GPT|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588362|pdb|3GPW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588376|pdb|3GPW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588556|pdb|3HYE|N Chain N, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588570|pdb|3HYE|2 Chain 2, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689394|pdb|3MG4|N Chain N, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689408|pdb|3MG4|2 Chain 2, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361157|pdb|3MG0|N Chain N, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361171|pdb|3MG0|2 Chain 2, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361185|pdb|3MG6|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361199|pdb|3MG6|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361213|pdb|3MG7|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361227|pdb|3MG7|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361241|pdb|3MG8|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361255|pdb|3MG8|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|335892354|pdb|3OKJ|N Chain N, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892368|pdb|3OKJ|2 Chain 2, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780432|pdb|3OEU|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780446|pdb|3OEU|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780460|pdb|3OEV|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780474|pdb|3OEV|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610685|pdb|3TDD|N Chain N, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610699|pdb|3TDD|2 Chain 2, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545859|pdb|3SHJ|N Chain N, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545873|pdb|3SHJ|2 Chain 2, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792254|pdb|3UN4|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792268|pdb|3UN4|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792288|pdb|3UN8|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792302|pdb|3UN8|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980829|pdb|3SDI|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980843|pdb|3SDI|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980857|pdb|3SDK|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980871|pdb|3SDK|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550745|pdb|4GK7|N Chain N, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550759|pdb|4GK7|BB Chain b, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072198|pdb|4G4S|H Chain H, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973873|pdb|4FZC|N Chain N, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973887|pdb|4FZC|BB Chain b, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973901|pdb|4FZG|N Chain N, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973915|pdb|4FZG|BB Chain b, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302352|pdb|4INR|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302366|pdb|4INR|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302380|pdb|4INT|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302394|pdb|4INT|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302408|pdb|4INU|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302422|pdb|4INU|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 196
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 21 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS 80
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 81 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYC 138
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL G+ R
Sbjct: 139 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 185
>gi|476044|emb|CAA55591.1| proteasomal subunit Pre3 [Saccharomyces cerevisiae]
gi|854572|emb|CAA60921.1| proteasome component pre3 [Saccharomyces cerevisiae]
gi|207343916|gb|EDZ71228.1| YJL001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323304338|gb|EGA58111.1| Pre3p [Saccharomyces cerevisiae FostersB]
gi|323354485|gb|EGA86324.1| Pre3p [Saccharomyces cerevisiae VL3]
gi|365764803|gb|EHN06323.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|741845|prf||2008180A peptidyl-Glu protease
Length = 193
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 18 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS 77
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 78 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYC 135
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL G+ R
Sbjct: 136 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 182
>gi|354611438|ref|ZP_09029394.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353196258|gb|EHB61760.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 243
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I +++ K+ ++ ++ SG +A + L A +Y+ + + MS A+ +
Sbjct: 72 GRVISNKNVQKVEEIQPNAALSISGSVGGSQAFIRSLRAEANLYEARRGEYMSINALSTM 131
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
SN L FF +LGG+D EG VY+ D GS Y++QGSG MP+
Sbjct: 132 ASNLLRGGPFF--LVVPILGGVDEEGA-HVYSLDPGGSSMSDKYTAQGSG----MPYA-- 182
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L + Q+ L+ EA + SA+ERD +G+ + I + DGI
Sbjct: 183 -------LGVLEQEYTDDLTMEEAERVGAQAVQSASERDTASGNGIHITRITADGI 231
>gi|357624159|gb|EHJ75038.1| hypothetical protein KGM_19166 [Danaus plexippus]
Length = 205
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
++ D KI K++DK VM G D + +A +Y+ ++ ++ A
Sbjct: 32 VMKDDEEKIYKISDKLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAANFTRR 91
Query: 67 TL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
L Y + PY+ ++GG D E +Y D + S +V +++ G G L + +D
Sbjct: 92 NLAEYLRSSTPYFVNLLMGGYDKENGPELYFMDYLASSMKVPFAAHGFGGYLSLSIMDRY 151
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
K +DA +E EA +++K C +R + ++ V+N+DGI
Sbjct: 152 HK---------KDA----TEEEAYEILKKCVQEVHKRLFVSLPNFQVTVVNRDGI 193
>gi|225429850|ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
Length = 231
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 31 STGMYVANRASDKITQLTDNVYICRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATV 86
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGST
Sbjct: 87 KVAANLV---RLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGGTIIEQPFAIGGSGST 143
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 144 YLYGFFDQAWKE-------------GMTKDEAEQLVVKAVSLAIARDGASGGVIRTVIIN 190
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 191 SEGVTRNF 198
>gi|21592365|gb|AAM64316.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
Length = 223
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + RH + HQH Q PA
Sbjct: 23 STGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RHFL--HQHTIQHGQPATV 78
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 79 KVSANLI---RMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSS 135
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 136 YLYGFFDQAWKDN-------------MTKEEAEQLVVKAVSLAIARDGASGGVVRTVIIN 182
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 183 SEGVTRNF 190
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
I +++ K+ ++ + M +G D + L + + A +Y+ Q M A LLSN
Sbjct: 33 ISNKNAQKLYQIDNYAAMTIAGLVGDAQVLVRYMKAEMELYRVQRKVSMPIDAAATLLSN 92
Query: 67 TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L +F+PY ++GG D K +++ DA G Y+S GSGS + L+ + +
Sbjct: 93 MLNQTKFYPYMVQLLVGGYDT--KPHIFSIDAAGGSVEDIYASTGSGSPFVYGVLEAEYQ 150
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+S + ++LV ++A +RD +G+ L++ V++
Sbjct: 151 K-------------NMSLDDGINLVIKAISAAKQRDSASGNMLQLGVVD 186
>gi|296081796|emb|CBI20801.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 23 STGMYVANRASDKITQLTDNVYICRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATV 78
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGST
Sbjct: 79 KVAANLV---RLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGGTIIEQPFAIGGSGST 135
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 136 YLYGFFDQAWKE-------------GMTKDEAEQLVVKAVSLAIARDGASGGVIRTVIIN 182
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 183 SEGVTRNF 190
>gi|3114276|pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114290|pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
Length = 205
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 30 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS 89
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 90 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYC 147
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL G+ R
Sbjct: 148 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 194
>gi|66271073|gb|AAY43813.1| beta1 proteasome-7D [Aegilops tauschii]
gi|66271075|gb|AAY43814.1| beta1 proteasome-7D [Aegilops tauschii]
Length = 246
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 46 STGMYVANRASDKISQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATV 101
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ SN L Y+ + ++GG D G +Y+ G+ R ++ GSGS+ +
Sbjct: 102 KVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGGTILRQPFAIGGSGSSYLY 161
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+D++ K +++ EA V + A RD +G + V +N++G
Sbjct: 162 GLMDHEWKE-------------GMTQEEAEKFVVKVVSLAIARDGASGGVVRTVTINEEG 208
Query: 179 IHREY 183
+ R +
Sbjct: 209 VKRSF 213
>gi|448727988|ref|ZP_21710328.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445788654|gb|EMA39360.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 225
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S++ KI+++ + SG + ++L + L A +Y+ + + MS A+
Sbjct: 52 SAGNMVASKNARKILQIHSSAALTISGSVSAAQSLVESLRAEVRLYETRRDTTMSLNALA 111
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ +N L F VLGG+D+EG VY+ GS Y++ GSGS + L
Sbjct: 112 NVTANRLRSGNFQIVQP--VLGGVDDEGA-HVYSIGPGGSVMEETYAASGSGSPFALGVL 168
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + + + DA T + A SATERD +G+ L + + ++G+
Sbjct: 169 EGEYDEEASV----DDARTTAARA---------VQSATERDTASGNGLSLATITEEGV 213
>gi|256270206|gb|EEU05428.1| Pre3p [Saccharomyces cerevisiae JAY291]
Length = 216
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 41 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS 100
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 101 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYC 158
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL G+ R
Sbjct: 159 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 205
>gi|6322459|ref|NP_012533.1| Pre3p [Saccharomyces cerevisiae S288c]
gi|1172606|sp|P38624.2|PSB1_YEAST RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit PRE3; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE3;
AltName: Full=Proteasome component PRE3; AltName:
Full=Proteinase YSCE subunit PRE3; Flags: Precursor
gi|323462949|pdb|3NZJ|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462963|pdb|3NZJ|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462977|pdb|3NZW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462991|pdb|3NZW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463005|pdb|3NZX|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463019|pdb|3NZX|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|403071954|pdb|4B4T|1 Chain 1, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|2131077|emb|CAA89290.1| PRE3 [Saccharomyces cerevisiae]
gi|151945075|gb|EDN63326.1| 20S proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190409486|gb|EDV12751.1| 20S proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|285812892|tpg|DAA08790.1| TPA: Pre3p [Saccharomyces cerevisiae S288c]
gi|290771204|emb|CBK33732.1| Pre3p [Saccharomyces cerevisiae EC1118]
gi|349579189|dbj|GAA24352.1| K7_Pre3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298426|gb|EIW09523.1| Pre3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + A
Sbjct: 40 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAAS 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y+ + ++ G D++ KG VYT GS ++ Y+ GSGST I +
Sbjct: 100 VF--KELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E VD +K + A + D +G + +VVL G+ R
Sbjct: 158 DKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 204
>gi|322697964|gb|EFY89738.1| 20S proteasome subunit [Metarhizium acridum CQMa 102]
Length = 261
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ AD V+ GF D+ +Q L RHL Y + ++
Sbjct: 62 YGSLARFTDVKRLRPFADASVV---GFSGDISDMQYL--DRHLTDLALTEAYDSPDSARL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + LS LY +R F P ++ ++ GLD++G + D +G+ + G G
Sbjct: 117 NASNLHRYLSKLLYRRRSKFDPLWNHLLVAGLDDKGTPFLAAADLLGTTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + P +++ L+ EAVD++K C RD + D + +
Sbjct: 177 AMLAQPVMRR--------YAPDEESAAKLTREEAVDIIKECMKVLFYRDARSLDSYSLAI 228
Query: 174 LNKDGIH-REYMEL 186
+ KDG+ RE +L
Sbjct: 229 VTKDGVELRENQKL 242
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
S L +++++ K+ D+ +++ +GF D + L K L +++ +++ LLS
Sbjct: 33 STLHSNFTRLYKMTDRLILSLTGFVPDCQILYKTLRKHVNMFKLNEQREIEPKEFACLLS 92
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQ 124
LY KRF P+ ++ G D E VYT D +G ++S G+ ST + D
Sbjct: 93 YILYSKRFSPFLISPLIVGFDRENNPHVYTMDLIGCMSAHKDFASTGTASTNLTGIADVL 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG-IHREY 183
L +D T +A F +A +R+ +G ++++L +HRE
Sbjct: 153 FTEG----LEEEDLFTTAVQA---------FLNAIDRNALSGWGSDVIILTPSKRVHRE- 198
Query: 184 MELRKD 189
++ R+D
Sbjct: 199 VKTRQD 204
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ K+ ++ DK + +G DV+++ +LL + +Y+ + + + LLSN
Sbjct: 35 VAMDFQKVFRVTDKTFLGLAGLATDVQSVSQLLKFKINMYKMNEERDIKPKTLSALLSNM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
+Y KRF P++ V+ GL + K + + D +G + G+ + ++ K
Sbjct: 95 MYEKRFGPWFVEPVIAGLTEDNKPFLSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYK 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
+ E + + + C SA RD +G + ++ GI + ++
Sbjct: 155 P-------------DMEEEDLFETLSQCLLSACNRDALSGWGAVVHIITPKGITSKKLQS 201
Query: 187 RKD 189
R+D
Sbjct: 202 RQD 204
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S KI ++ D M ++G D ++L +++ +Y+ Q + ++ A+
Sbjct: 28 TMGSFIASSQAKKIYQIDDLVGMTTAGGVGDAQSLVRMVQVEARLYKMQRGEGLTVKAVT 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPF 120
+L+N L +R++P+ ++GG+D G +Y+ DA+G E + GSGS +
Sbjct: 88 TMLANILSSRRYYPFMVQLIMGGVDRYGP-RIYSLDALGGQIEERRIVATGSGSPVAYGV 146
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 172
L+ K P +S + L +A +RD +GDK+E+V
Sbjct: 147 LEAMYK-------PG------ISVEDGTVLAARAIHNALKRDSASGDKIELV 185
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
Y S ++ K+ +L + C++ G ADV+ + + + +Y+ + + + +
Sbjct: 34 YQFASSNFHKVFQLNEHCLVGGCGVYADVQTVFEQIKYDANLYKLREGRPIGPSQLVNAT 93
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
++ L+ KRF PYY ++ G D+ GK +YD +G+ +++ G+G M D+
Sbjct: 94 AHLLFSKRFNPYYMSPIIIGFDDNGKTYCSSYDYIGAPGDYRFAAVGTGCNEAMGVCDSF 153
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
K + E V+ + C + RD ++G +E+ +
Sbjct: 154 YKE-------------DMEPEELVETIGQCLLAGENRDAFSGWGVELPI 189
>gi|149463382|ref|XP_001520474.1| PREDICTED: proteasome subunit beta type-1-like [Ornithorhynchus
anatinus]
Length = 66
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 140 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
PL+ +A+ LVK F SA ERD+YTGD L+I ++ KDGI E + LR+D
Sbjct: 17 VPLTLGKALQLVKDVFISAAERDVYTGDALKICIVTKDGIQEETISLRRD 66
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI K+ + +G AD + + +L +++ + +S ++
Sbjct: 33 SAGYFIANNNTMKIQKIDLHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + ++GG D G ++ D GS E Y + GSGS + L
Sbjct: 93 RLCSLIFHQNRGYPFMADILVGGFDANGP-ALFNIDMFGSVEEKSYVTTGSGSPVAYGLL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+ + K L+ EA + +A R+I TGD + I V++KDG
Sbjct: 152 EEEYKK-------------DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 17/188 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I R KI K+ M +G AD + L + +Y+ Q+ + M +
Sbjct: 40 SAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLVDTMRYNANLYRFQNKELMPVKSAA 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L SN L+ +R+FPYY ++ G ++ D GS + S GSGS + +L
Sbjct: 100 RLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHNIDLFGSMTTEKFISTGSGSPVAYGYL 159
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+++ + +S +A + A+A R+ TGD + +V+++K+G
Sbjct: 160 ESEYRD-------------GMSVNDAYKVAMQAIAAAIRRNAGTGDSINVVIIDKNG--- 203
Query: 182 EYMELRKD 189
Y EL K+
Sbjct: 204 -YRELSKE 210
>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 20/184 (10%)
Query: 2 STGYSILS--RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPA 59
S +SIL KI+KL D + SG AD + +++ H + +++ M+
Sbjct: 20 SIAHSILKIKETEDKILKLDDHKIFGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQE 79
Query: 60 MGQLLSNTLYYK----RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+ ++Y + R P+ +LGG+D++G +Y D +GS +++ +QG +
Sbjct: 80 TAHFV-RSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANY 138
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
++ LDNQ K P+ L++ E ++++K C R + +K + ++
Sbjct: 139 FLLGLLDNQYK-PN------------LTKEEGIEIIKKCIKELQTRFLIAQNKFIVKIVT 185
Query: 176 KDGI 179
K GI
Sbjct: 186 KQGI 189
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S GY I + + KI ++ + +G AD + + +L +++ + +S ++
Sbjct: 33 SAGYFIANNNTMKIQQIDQHAGLTLAGGVADAQNIVDILRYHSNLHRVEKQNSISIHSLA 92
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+L S + R +P+ + +LGG D G ++ D GS E Y + GSGS + L
Sbjct: 93 RLCSLIFHQNRGYPFMADILLGGYDANGP-SLFNVDMFGSVEEKSYVTTGSGSPVAYGLL 151
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+ + K L+ EA + +A R+I TGD + I +++KDG
Sbjct: 152 EEEYKE-------------DLTIEEAKQVALRAVKAAIVRNIGTGDGINIAIMDKDG 195
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I +++ K+ K+ M +G D + L + + A +Y+ Q M A
Sbjct: 28 TMGNFISNKNAQKLYKIDTYAGMTIAGLVGDAQVLVRYMRAEMELYRVQRKINMPIEAAA 87
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LLSN L +++PY ++GG D K +++ DA G Y+S GSGS + L
Sbjct: 88 TLLSNMLNQSKYYPYMVQLLVGGFDK--KPHIFSIDAAGGSVEDEYASTGSGSPFVYGVL 145
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKD 177
+ + + L +A++L + A +RD +G+ L+I V++ +
Sbjct: 146 EAEYQPNMKL-------------DDAINLAIKAISVAKQRDSASGNMLQIGVIDPE 188
>gi|340517515|gb|EGR47759.1| proteasome, subunit beta 4 [Trichoderma reesei QM6a]
Length = 261
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ A ++ GF D+ +Q L RHLI Y+ ++
Sbjct: 62 YGSLARFTDVKRLRPFAGTSIL---GFSGDISDMQYL--DRHLIDLSLSEAYESPDKPRL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
S + + L+ LY +R F P ++ ++GGLD+ G+ + D +GS + G G
Sbjct: 117 SAANLHRYLAKLLYSRRSKFDPLWNHLLVGGLDDAGEPFLAAADLLGSTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + +P +++ LS EAV++VK RD + D + V
Sbjct: 177 AMLAQPIMRR--------YVPDEESAKNLSREEAVNIVKEAMKVLFYRDARSLDSYSLAV 228
Query: 174 LNKDGIHREYMELRKD 189
+ KDG+ + E +D
Sbjct: 229 VTKDGVELKENEKLED 244
>gi|448738995|ref|ZP_21721015.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
gi|445800809|gb|EMA51157.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
Length = 232
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S++ KI+++ + SG + ++L + L A +Y+ + + MS A+
Sbjct: 59 SAGNMVASKNARKILQVHSSAALTISGSVSAAQSLVESLRAEVRLYETRRDTAMSLNALA 118
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +N L F VLGG+D+EG +Y+ GS Y++ GSGS + L
Sbjct: 119 NLTANLLRSGNFQIVQP--VLGGVDDEGA-HIYSIGPGGSVMEETYAASGSGSPFALGVL 175
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + + + DA T + A SATERD +G+ L + + +G+
Sbjct: 176 EGEYDEEASV----DDAETTAARA---------VQSATERDTASGNGLSLATITDEGV 220
>gi|341897914|gb|EGT53849.1| CBN-PBS-1 protein [Caenorhabditis brenneri]
Length = 239
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 79/178 (44%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I SR +KI + + V+ SG AD +A+ + +Y NK ++
Sbjct: 44 SAGSFITSRATNKITPITENMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSS 103
Query: 62 QLLSNTLYYKRFFPYYSFNVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
Q+ LY R S +VL G D E G VY G R ++ GSGST + F
Sbjct: 104 QIFRQFLYNYR--EQLSASVLVAGWDAELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGF 161
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
LD+Q + P L L E +A+ VK AT RD +G + + V++K G
Sbjct: 162 LDSQWR---PDLT--------LDECKAI--VKQAVGLATFRDGSSGGVVRLAVIDKTG 206
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+ ++ D K+ K+ DK + +GFQ+D + + + + R +Y+ + N+++ + +++S
Sbjct: 33 TTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRRIKPQVLSEMIS 92
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQ 124
N Y RF Y++ ++ GLD+ K + D +G + + G+G ++ +N
Sbjct: 93 NLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENF 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + P + L EA A ++ S ERD +G + + KD ++ +
Sbjct: 153 WREN---MKPEE-----LFEATAQSIL-----SCLERDAASGWGAVVYTITKDKVNVSTI 199
Query: 185 ELRKD 189
+ R D
Sbjct: 200 KARMD 204
>gi|258566702|ref|XP_002584095.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
gi|237905541|gb|EEP79942.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
Length = 192
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV ++ L+ + +Y+ + +Q+S + L+S++
Sbjct: 22 VSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLMRYKVNLYRLREERQISPQTLANLVSSS 81
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF P++ VL G+++ GK + +D++G + + G+ S + + L
Sbjct: 82 LYEKRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGMCEG-L 140
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P L E + V +A +RD +G + ++ KD + + ++
Sbjct: 141 WEPD------------LGPEELFETVSQALLNAVDRDALSGWGAHVYIIEKDRVTKRLLK 188
Query: 186 LRKD 189
R+D
Sbjct: 189 GRQD 192
>gi|326519234|dbj|BAJ96616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 46 STGMYVANRASDKISQLTDNVYVCRSGSAADTQIISDYV--RYFL--HQHTIQLGQPATV 101
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ SN L Y+ + ++GG D G +Y+ G+ R ++ GSGS+ +
Sbjct: 102 KVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGGTILRQPFAIGGSGSSYLY 161
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+D++ K +++ EA V + A RD +G + V +N++G
Sbjct: 162 GLMDHEWKE-------------GMTQEEAEKFVVKVVSLAIARDGASGGVVRTVTINEEG 208
Query: 179 IHREY 183
+ R +
Sbjct: 209 VKRSF 213
>gi|68510416|gb|AAY98499.1| LMP X [Swiftia exserta]
Length = 268
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S+ K+I++ + +G AD +++LA + IY+ ++ +++S A
Sbjct: 85 TAGSYIASQTVKKVIEINPYLLGTMAGGAADCSYWERVLAKQCRIYELRNKERISVAAAS 144
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL+N +YY R ++ G D G G Y D+ GS S GSGST L
Sbjct: 145 KLLANMVYYYRGMGLSMGTMICGWDKRGPGLYYV-DSDGSRLSNNIFSVGSGSTFAYGVL 203
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ + LS EA DL + AT RD Y+G + + + + G
Sbjct: 204 DSGYR-------------PDLSVQEAYDLGERAIYHATHRDAYSGGVVNMYHMQETG 247
>gi|326495934|dbj|BAJ90589.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 44 STGMYVANRASDKISQLTDNVYVCRSGSAADTQIISDYV--RYFL--HQHTIQLGQPATV 99
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ SN L Y+ + ++GG D G +Y+ G+ R ++ GSGS+ +
Sbjct: 100 KVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGGTILRQPFAIGGSGSSYLY 159
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+D++ K +++ EA V + A RD +G + V +N++G
Sbjct: 160 GLMDHEWKE-------------GMTQEEAEKFVVKVVSLAIARDGASGGVVRTVTINEEG 206
Query: 179 IHREY 183
+ R +
Sbjct: 207 VKRSF 211
>gi|323451149|gb|EGB07027.1| hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens]
Length = 201
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+D KI+KL D ++ SG AD A + + +Y+ + +S A +
Sbjct: 28 FKKDEDKIMKLDDFKLLGQSGVGADNVAFTEYVQKNVALYKINNGLSLSTKATNNFIRGD 87
Query: 68 LYYK-RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 126
L R PY + +LGG D +Y D + S +V + G GS ++ LD
Sbjct: 88 LATALRKGPYQTNLLLGGFDKGVGASLYYIDYMASSNKVNFGCHGYGSNFVLSILD---- 143
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
++ L EA +D++ C A R + K I +++KDGI
Sbjct: 144 ---------REWTEGLDEAAGLDIINKCIAELQTRFLIHMPKFLIKIVDKDGIR 188
>gi|296805317|ref|XP_002843483.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
gi|238844785|gb|EEQ34447.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
Length = 266
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 19/191 (9%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPAM 60
Y L+R D ++ + V+ G +D++ + ++L + + Y ++ +
Sbjct: 67 YGSLARFTDVKRLRAFDNSSVVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNL 126
Query: 61 GQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
LS LY +R F P ++ ++ GLD EGK + + D +G+ + G G+ L +
Sbjct: 127 HTYLSKLLYKRRSDFDPLWNHILVAGLDGEGKPFLSSADLLGTTYSAPSLATGFGAHLAI 186
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P L L P +D + +++ +A+D +K C RD + D+ I V+ K+G
Sbjct: 187 PILRR--------LFPEEDGIENITKEQAIDAMKQCMKVLFYRDARSSDRYSIAVVTKEG 238
Query: 179 IHREYMELRKD 189
+ EL++D
Sbjct: 239 V-----ELKED 244
>gi|315518857|dbj|BAJ51757.1| proteasome subunit, beta type 8 [Oryzias celebensis]
Length = 273
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 90 SAGNYISAGEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 149
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y D G+ S GSG++ L
Sbjct: 150 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDDNGNRLSGRMFSTGSGNSYAYGVL 208
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K ++ EA +L + A AT RD Y+G + + + +DG
Sbjct: 209 DSGYKE-------------DMTIEEAYELGRRGIAHATHRDSYSGGVVNLYHIQEDG 252
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 23/188 (12%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ D KI K+ DK + +G DV+ + + L R +Y + + + + L+SN
Sbjct: 35 VGTDMQKIFKIHDKLFIGLNGLATDVQTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNI 94
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP-FLDNQL 125
LY KRF P++ V+ GL+ E K + D +G+ P F DN +
Sbjct: 95 LYEKRFGPWFIEPVIAGLEGPENKPFICAQDLIGA-----------------PCFTDNFV 137
Query: 126 KSPS---PLLLPAQDAVTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
S + L + P E E + +++ C +A +RD +G + V+ D I
Sbjct: 138 VSGTCSEALYGMCESLYKPDMEPEDLFEVISQCLLAAVDRDCISGWGAVVHVITPDSITT 197
Query: 182 EYMELRKD 189
+ +++R+D
Sbjct: 198 KRLKVRQD 205
>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
Length = 192
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV ++ LL + +Y+ + +Q+S + L+S++
Sbjct: 22 VSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNMYRLREERQISPQTLANLISSS 81
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ VL G+++ GK + +D++G + + G+ S D
Sbjct: 82 LYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFAKDFIVSGTAS-------DQLF 134
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ L P L + + + +A +RD +G + ++ KD + + ++
Sbjct: 135 GTCEGLWEP------DLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 188
Query: 186 LRKD 189
R+D
Sbjct: 189 GRQD 192
>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I ++ DK + SG D L + L RH +YQ + + M ++S
Sbjct: 35 IATDFKRIFRIHDKLYVGLSGLATDALTLYQRLVFRHKLYQLREERDMKPETFASVVSAI 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ V+ GL + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPVIAGLGEDDVPFICTMDCIGAKE 130
>gi|225445670|ref|XP_002266488.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
gi|297736018|emb|CBI24056.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + L + R+ Y HQH Q+ PA
Sbjct: 32 STGVYVANRASDKITQLTDNVYLCRSGSAADSQILSDYV--RY--YLHQHTIQLGQPATV 87
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 88 KVAANLV---RLISYNNKNMLQTGLIVGGWDKHEGGKIYGVPLGGTILEQPFAIGGSGSS 144
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D + K +++ EA LV + A RD +G + V +N
Sbjct: 145 YLYGFFDQEWKE-------------GMTKDEAEKLVVKAVSLAIARDGASGGVVRTVTIN 191
Query: 176 KDGIHREY 183
+G+ + +
Sbjct: 192 SEGVTKNF 199
>gi|367002177|ref|XP_003685823.1| hypothetical protein TPHA_0E02990 [Tetrapisispora phaffii CBS 4417]
gi|357524122|emb|CCE63389.1| hypothetical protein TPHA_0E02990 [Tetrapisispora phaffii CBS 4417]
Length = 216
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ + +Y Q + S
Sbjct: 40 TTGAYIANRVTDKLTRVQDKIWCCRSGSAADTQAVADIVQYQLELYTAQFG-EPSTKVAA 98
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ Y + V G D E KG VY+ GS + Y+ GSGST I +
Sbjct: 99 SIFKTMCYDNKDNLSAGIIVAGFDDKENKGEVYSIPLGGSLHKQKYAIAGSGSTFIYGYC 158
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +++ E VD +K + A + D +G + +VV+ KDG+ R
Sbjct: 159 DKNYKE-------------NMTKDETVDFMKHSLSQAIKWDGSSGGVIRMVVVTKDGVER 205
>gi|448733676|ref|ZP_21715918.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
gi|445802196|gb|EMA52503.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
Length = 237
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 16/181 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ KI ++ + + SG + +AL L A +Y+ + ++MS A+
Sbjct: 64 SAGNMVASKQAEKIAEIHPRGALTISGAVSAAQALISNLKAEVDLYEARRGEEMSMQALS 123
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L N L FF VLGG+D+EG +Y D GS Y+ GSGS + L
Sbjct: 124 TLTGNFLRSGAFFIVQP--VLGGVDDEGS-HIYRIDIGGSVMEEDYAVSGSGSPFALGVL 180
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ + D + EAE V SA ERD +G+ + + + ++G+
Sbjct: 181 EQEY-----------DDGLSMDEAETV--AARAVKSAVERDTASGNGITLSEVTEEGVTI 227
Query: 182 E 182
E
Sbjct: 228 E 228
>gi|322705602|gb|EFY97186.1| 20S proteasome subunit [Metarhizium anisopliae ARSEF 23]
Length = 261
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ AD V+ GF D+ +Q L RHL Y + ++
Sbjct: 62 YGSLARFTDVKRLRPFADASVV---GFSGDISDMQYL--DRHLTDLALTEAYDSPDSARL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + LS LY +R F P ++ ++ GLD++G + D +G+ + G G
Sbjct: 117 NASNLHRYLSKLLYRRRSKFDPLWNHLLVAGLDDKGAPFLAAADLLGTTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + P +++ L+ EAVD++K C RD + D + +
Sbjct: 177 AMLAQPVMRR--------YAPDEESAAKLTREEAVDIIKECMKVLFYRDARSLDSYSLAI 228
Query: 174 LNKDGIH 180
+ KDG+
Sbjct: 229 VTKDGVE 235
>gi|50311275|ref|XP_455662.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644798|emb|CAG98370.1| KLLA0F12936p [Kluyveromyces lactis]
Length = 215
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ K+ DK SG AD +A+ ++ +Y Q+ + + A
Sbjct: 40 TTGAYIANRVTDKLTKVHDKIWCCRSGSAADTQAVADIVQYHLELYTSQYGEPTTKVAAS 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ TL Y+ + ++ G D + KG VY+ GS + YS GSGS I +
Sbjct: 100 --IFKTLCYENKDHLTAGIIVAGYDEKNKGEVYSIPLGGSVHKQSYSIAGSGSAFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +++ E ++ VK + A + D +G + +VVL +G+ R
Sbjct: 158 DKNYKE-------------DMTKEETIEFVKHSLSQAIKWDGSSGGVIRMVVLTAEGVER 204
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
S L +++++ K+ D+ +++ +GF D + L K L +++ +++ LLS
Sbjct: 33 STLHSNFTRLYKITDRIILSLTGFVPDCQVLYKTLRKHVTMFKLSQQREIEPKEFSSLLS 92
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQ 124
LY KRF P+ ++ G D E VYT D +G +++ G+ S + D
Sbjct: 93 YILYSKRFSPFLISPLIAGFDRENNPHVYTMDLIGCVSGHDDFATTGTASKSLSGIAD-- 150
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKT---CFASATERDIYTGDKLEIVVLNKDG-IH 180
V + E DL T F +A +R+ +G + V+L IH
Sbjct: 151 --------------VLFTEDMEPEDLFTTTMQAFLNAIDRNALSGWGSDAVILTPSKRIH 196
Query: 181 REYMELRKD 189
RE ++ R+D
Sbjct: 197 RE-VKTRQD 204
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+ ++ D K+ K+ DK + +GFQ+D + + + + R +Y+ + N+++ + +++S
Sbjct: 33 TTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRRIKPQVLSEMIS 92
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQ 124
N Y RF Y++ ++ GLD+ K + D +G + + G+G ++ +N
Sbjct: 93 NLAYQHRFGSYFTEPLVAGLDDSNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENF 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + P + L EA A ++ S ERD +G + + KD ++ +
Sbjct: 153 WREN---MKPDE-----LFEATAQSIL-----SCLERDAASGWGAVVYTITKDKVNVSTI 199
Query: 185 ELRKD 189
+ R D
Sbjct: 200 KARMD 204
>gi|219567040|dbj|BAH05038.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
Length = 238
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 55 STGSYVDTCEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 114
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y D G+ S GSGS L
Sbjct: 115 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDDNGNRLSGRMFSTGSGSNYAYGVL 173
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ K ++ EA +L + AT RD Y+G + + + +DG
Sbjct: 174 DSGYKE-------------DMTVEEAYELGRRGIVHATHRDSYSGGVVNMYHIQEDG 217
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI DKC + +G DV L++ + +Y+ + + + + L+S+T
Sbjct: 36 VSNNFEKIFGFGDKCFLGLTGLATDVLTLKETFRFKTNLYKLREERSIEPETLANLVSST 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY +RF PY+ ++ GL + + K + +D++G + + G+ S + ++
Sbjct: 96 LYERRFGPYFVSPIVAGLGHKDNKPFICGFDSIGCIDFAKDFIVSGTASDQLYGMCESLY 155
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P Q + + +A +RD +G + ++ KD + + ++
Sbjct: 156 E---PDLEPEQ----------LFETISQALLNAVDRDALSGWGAVVYIVTKDKVVKRVLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|145341544|ref|XP_001415866.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576089|gb|ABO94158.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 246
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPA 59
+STG + +R K+ L D+ +M SG AD +AL + R+++ QH+ +++
Sbjct: 37 VSTGIYVSNRASDKMCALNDRTIMCRSGSAADTEALAGYV--RNIVSQHEMELDEIADVK 94
Query: 60 MGQLLSNTLYYK-----RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
++N + Y+ R ++ ++GG D VY A G+ + +++ GSGS
Sbjct: 95 TVATIANQIGYQNKGANRGRGLSAYTIVGGWDKRRGSQVYACTAGGNMIKERWTTDGSGS 154
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
T I FLD+ + ++ E V A A D +G + + +
Sbjct: 155 TYIWGFLDSGWRE-------------GMTREECEAFVAKAIALAMSVDGSSGGCIRLNAV 201
Query: 175 NKDGIHREYME 185
+ GIHR +++
Sbjct: 202 DASGIHRTFIQ 212
>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
Length = 192
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV + +L + +Y+ + +Q+S + L+S++
Sbjct: 22 VSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNMYRLREERQISPQTLANLVSSS 81
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ VL G++N G+ + +D++G + + G+ S + + L
Sbjct: 82 LYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIGCIDFAKDFIVSGTASEQLFGTCEG-L 140
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 141 WEPD---LGPEDLFETISQA---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 188
Query: 186 LRKD 189
R+D
Sbjct: 189 GRQD 192
>gi|260946487|ref|XP_002617541.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
gi|238849395|gb|EEQ38859.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
Length = 192
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ ++ KI + DK + +G DV L++ +H +Y+ + +++ + L+S++
Sbjct: 22 VANNFEKIFQFGDKTFLGLTGLATDVLTLKEDFRLKHNLYKLREEREIEPRTLANLVSSS 81
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ ++ GL+++ K + +D +G + + G+ S + ++ L
Sbjct: 82 LYEKRFGPYFVGPIVAGLESKTNKPFICGFDLIGCIDFAKDFIVSGTASDQLYGMCES-L 140
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 141 YEPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAVVYIVTKDKVVKRVLK 188
Query: 186 LRKD 189
R+D
Sbjct: 189 TRQD 192
>gi|330914585|ref|XP_003296699.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
gi|311331040|gb|EFQ95206.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
Length = 260
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPAMG 61
Y L+R D ++ K D+ V+ G +D++ L +LL + + + ++ ++ +
Sbjct: 62 YGSLARFTDVKRLRKFNDEVVVGFGGDVSDMQYLDRLLNSLDIRENYSSSENSLNAKNLH 121
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
LS +Y +R F P ++ ++ G+D E K + + D +G+ + G G+ L P
Sbjct: 122 TYLSKVMYNRRSKFDPLWNHMLIVGMDGEKKPFLASADLLGTTFSSPSLATGFGAHLAQP 181
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L +LP + AV ++ +AV+ +K C RD + DK I V+ KDG+
Sbjct: 182 ILRT--------ILPDEAAVENVTREQAVEKIKECMKVLFYRDARSMDKYSIAVVTKDGV 233
>gi|409723248|ref|ZP_11270548.1| proteasome beta subunit [Halococcus hamelinensis 100A6]
Length = 237
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ KI ++ + + SG + +AL L A +Y+ + ++MS A+
Sbjct: 64 SAGNLVASKRAEKIAEIHPRGALTISGAVSAAQALINNLQAEVRLYEARRGEEMSIKALA 123
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L SN L F Y +LGG+D++G +Y+ GS Y++ GSGS L
Sbjct: 124 TLTSNFLRSGAF--YIVQPILGGVDDDGH-HIYSIGPGGSVMEEPYNATGSGSPFAYGVL 180
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG--- 178
+ Q + LS EA + SA ERD +G+ + I + G
Sbjct: 181 EQQFEE-------------GLSNEEAKTVATDAVKSAVERDTASGNGIIISEITDAGVDI 227
Query: 179 -IHREYMEL 186
+H ++ EL
Sbjct: 228 EVHDDFDEL 236
>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ K + SG +D + L + L +H +YQ + + M L+S+
Sbjct: 35 VATDFQRVFKIHGKLYIGLSGLASDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSSM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ ++ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKE 130
>gi|50286241|ref|XP_445549.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524854|emb|CAG58460.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ D SG AD +A+ ++ +Y+ Q + + A
Sbjct: 40 TTGAYIANRVTDKLTRVHDNIWCCRSGSAADTQAVADIVQYYLDMYEGQFGEPDTYTAAN 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
TL Y+ + ++ G D + KG VY+ GS + Y+ GSGST I +
Sbjct: 100 MF--KTLCYQNKDALTAGIIVAGYDEKNKGEVYSIPLGGSIHKQPYAIAGSGSTFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E +D +K + A + D +G + +VVL KDG R
Sbjct: 158 DKNFRE-------------NMSKDETIDFIKHSLSQAIKWDGSSGGVIRMVVLTKDGPER 204
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ K+ +A + + +G Q D+ ++ L R IY+ + N++M+ +LS+
Sbjct: 35 ISTDFKKVFHIAPRMFLGLTGLQTDILTVRDRLMFRKNIYETKENREMAPKPFSAMLSSF 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQL 125
LY RF PY+ V+ GLD + K + D +G E + G+ + + +
Sbjct: 95 LYEHRFGPYFIEPVVAGLDPKTMKPFICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLW 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P Q L E A +V +A +RD +G + ++ KD I ++
Sbjct: 155 R---PDLEPDQ-----LFEVIAQSMV-----NAFDRDAMSGWGATVFIIEKDKITERSLK 201
Query: 186 LRKD 189
R D
Sbjct: 202 TRMD 205
>gi|396457900|ref|XP_003833563.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans
JN3]
gi|312210111|emb|CBX90198.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans
JN3]
Length = 276
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNK-QMSCPAMG 61
Y L+R D ++ K D+ V+ G +D++ L +LL + + + ++ Q++ +
Sbjct: 78 YGSLARFTDVKRLRKFNDEVVVGFGGDVSDMQYLDRLLNSLDIRENYSSSESQLNAKNLH 137
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ +Y +R F P ++ ++ G+D E K + + D +G+ + G G+ L P
Sbjct: 138 TYLAKVMYNRRSKFDPLWNHLLIVGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQP 197
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L +LP + AV +++ +AV+ +K C RD + DK I V+ K+G+
Sbjct: 198 ILRT--------ILPDEAAVAKVTKEQAVEKIKECMKVLFYRDARSMDKYSIAVVTKEGV 249
>gi|294889351|ref|XP_002772769.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239877319|gb|EER04585.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S + K+ + +C++ G D + L +LL R +Y+ + +++M C + L++
Sbjct: 33 VSANMQKVYPMTSRCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATM 92
Query: 68 LYYKRFFPYYSFNVLGGLDNEGK 90
LY KRF PY+ V+ GL N+G+
Sbjct: 93 LYEKRFGPYFCEPVIAGLKNDGE 115
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
++ K+ ++ DK + G D L+ + R +Y+ + + + M L+S+TLY
Sbjct: 38 NFEKVFQVTDKMFIGLPGLATDTFTLKNVFRHRVNMYKMKEERVIEPQTMAHLISSTLYQ 97
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPS 129
KRF PY+ V+ GLD++ + + D +G + G+ S S
Sbjct: 98 KRFGPYFVEPVVAGLDSKNEPFIAATDLIGCINFAKDFVVSGTAS--------------S 143
Query: 130 PLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRK 188
L A+ P L+ + + + +A +RD Y+G + ++ D + + ++ R
Sbjct: 144 KLFGMAEALWEPDLAPEDLFETISQTLLNAVDRDAYSGWGAVVWIIEADQVTKRVLKSRM 203
Query: 189 D 189
D
Sbjct: 204 D 204
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ K+ +A + + +G Q D+ ++ L R +Y+ + N++M+ +LS+
Sbjct: 35 ISTDFKKVFHIAPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMAPKPFSAMLSSF 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVG-SYERVGYSSQGSGSTLIMPFLDNQL 125
LY RF PY+ V+ GLD K + D +G E V + G+ + + +
Sbjct: 95 LYEHRFGPYFIEPVVAGLDPHTLKPFICNMDLIGCPNEPVDFVVAGTCAEQLYGMCETLW 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P Q +++ +A +RD +G + ++ KD I ++
Sbjct: 155 R---PDLEPDQ----------LFEVIAQSMMNAFDRDAMSGWGATVYIIEKDKITERSLK 201
Query: 186 LRKD 189
R D
Sbjct: 202 TRMD 205
>gi|169601776|ref|XP_001794310.1| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
gi|160706006|gb|EAT88967.2| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
Length = 309
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPAMG 61
Y L+R D ++ K D+ V+ G +D++ L +LL + + + N+ ++ +
Sbjct: 111 YGSLARFTDVKRLRKFNDEVVVGFGGDVSDMQYLDRLLNSLDIRETYSSNETALNAKNLH 170
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ +Y +R F P ++ ++ G+D E K + + D +G+ + G G+ L P
Sbjct: 171 TYLAKVMYNRRSKFDPLWNHLLIAGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQP 230
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L +LP + +V +++ +AV+ +K C RD + DK I V+ K+G+
Sbjct: 231 ILRT--------ILPDEASVEKVTKEQAVEKIKECMKVLFYRDARSMDKYSIAVITKEGV 282
>gi|41352685|gb|AAS01049.1| putative proteasome 20S beta1.1 subunit [Brassica napus]
Length = 172
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 2 STGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATV 57
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 58 KVSANLI---RMLAYNNKNMLQTGLIVGGWDKYEGGRIYGIPLGGTVVEQPFAIGGSGSS 114
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 115 YLYGFFDQAWKEN-------------MTKEEAEQLVVKAVSLAIARDGASGGVVRTVIIN 161
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 162 SEGVTRNF 169
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV + +L + +Y+ + +Q+S + L+S++
Sbjct: 36 VSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNMYRLREERQISPQTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ VL G++N G+ + +D++G + + G+ S + +
Sbjct: 96 LYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIGCIDFAKDFIVSGTASEQLFGTCEGLW 155
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 156 E---PDLGP-EDLFETISQA---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 GRQD 206
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ K+ ++ DK + +G DV+++ +LL + +Y+ +++ + LLS+
Sbjct: 35 VAMDFQKVFRVTDKTFLGLAGLATDVQSVSQLLKFKLNMYKMNEEREIKPKTLSALLSSM 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
+Y KRF P++ V+ GL + K + + D +G + G+ + ++ K
Sbjct: 95 MYEKRFGPWFVEPVIAGLTEDNKPFLSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYK 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
+ E + + + C SA RD +G + ++ GI + ++
Sbjct: 155 P-------------DMEEEDLFETLSQCLLSACNRDALSGWGAVVHIITPKGITSKKLQS 201
Query: 187 RKD 189
R+D
Sbjct: 202 RQD 204
>gi|41352683|gb|AAS01048.1| putative proteasome 20S beta1 subunit, partial [Brassica napus]
Length = 175
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 2 STGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATV 57
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 58 KVSANLI---RMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSS 114
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 115 YLYGFFDQAWKEN-------------MTKEEAEQLVVKAVSLAIARDGASGGVVRTVIIN 161
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 162 SEGVTRNF 169
>gi|321458597|gb|EFX69663.1| hypothetical protein DAPPUDRAFT_300859 [Daphnia pulex]
Length = 201
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 1 MSTGYSIL--SRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP 58
M+ +SIL +D K+ KL+D+ +MA +G D + + +Y+ ++ ++S P
Sbjct: 19 MTNAHSILVNKQDEDKMFKLSDRLLMAVTGESGDTTQFAEYIEKNIQLYKMRNGYELSPP 78
Query: 59 AMGQLLSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTL 116
A L + PY +L G +Y D + S + +++ G G
Sbjct: 79 AAANFTRRNLADSLRSRSPYMVNFLLAGYSERTGPELYWMDYLASMIKTPFATHGYGGMF 138
Query: 117 IMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
+ +D + L+E EA D++K C A +R I ++ VL+K
Sbjct: 139 SIGIMDRYYRPD-------------LTEQEAYDIMKKCVAEIQKRLIINLPNFQVKVLDK 185
Query: 177 DGIH 180
+GIH
Sbjct: 186 NGIH 189
>gi|322801573|gb|EFZ22229.1| hypothetical protein SINV_11095 [Solenopsis invicta]
Length = 207
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 1 MSTGYSI--LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP 58
M+T SI + D KI K++DK VMA SG D + + +Y+ ++ ++S
Sbjct: 19 MTTAQSIIVMKSDEHKIHKISDKLVMAISGESGDTTQFSEYIGKNIQLYKMRNGYELSPK 78
Query: 59 AMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTL 116
A L Y + PY+ +L G D++ +Y D + S RV Y++ G G
Sbjct: 79 AAACFTRRNLADYLRSRTPYFVNMLLAGYDDDSGPELYFIDYLASCVRVPYATHGYGGMF 138
Query: 117 IMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
M LD K +E EA L+K C +R I ++ ++K
Sbjct: 139 SMSVLDRYYKYDC-------------TEEEAYVLLKKCVREIQKRLIVNLPNFKVQKISK 185
Query: 177 DGI 179
DGI
Sbjct: 186 DGI 188
>gi|66271071|gb|AAY43812.1| beta1 proteasome-1D [Aegilops tauschii]
Length = 244
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 44 STGMYVANRASDKISQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATV 99
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ SN L Y+ + ++GG D G +Y+ G+ R ++ GSGS+ +
Sbjct: 100 KVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGGTILRQPFAIGGSGSSYLY 159
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+D++ K +++ EA V + A RD +G + V +N+ G
Sbjct: 160 GLMDHEWKE-------------GMTQEEAEKFVVKVVSLAIARDGASGGVVRTVTINEAG 206
Query: 179 IHREY 183
+ R +
Sbjct: 207 VKRSF 211
>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ +K + SG D + L + L +H +YQ + + M L+S
Sbjct: 35 VATDFQRVFKVHEKLYIGLSGLATDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ ++ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPIIAGLGDNDQPFICTMDCIGAKE 130
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 14/185 (7%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+ ++ D K+ K+ DK + +GFQ+D + + + + R +Y+ + N+++ + +++S
Sbjct: 33 TTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRRIKPQVLSEMIS 92
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQ 124
N Y RF Y++ ++ GLD+ K + D +G + + G+G ++ +N
Sbjct: 93 NLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENF 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + P + L EA A ++ S ERD +G + + KD ++ +
Sbjct: 153 WREN---MKPDE-----LFEATAQSIL-----SCLERDAASGWGAVVYTITKDKVNISTI 199
Query: 185 ELRKD 189
+ R D
Sbjct: 200 KARMD 204
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 14/179 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I ++ K+ K+ D M +G D ++L +LL+A IY+ + M+ +
Sbjct: 35 TMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLLSAEAKIYKMRTGNNMTPLSCT 94
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPF 120
L SN L+ R +P + ++GG D +++ D VG E +++ GSGS
Sbjct: 95 TLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSLDPVGGINEESSFTATGSGSPTAYGV 154
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + KS ++ + + + SA +RD Y+G+ + + ++K G+
Sbjct: 155 LEAEYKS-------------EINIEKGLLIAVKALISAMQRDAYSGNGISLAKIDKTGV 200
>gi|45184652|ref|NP_982370.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|44979998|gb|AAS50194.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|374105568|gb|AEY94479.1| FAAL172Cp [Ashbya gossypii FDAG1]
Length = 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ D+ SG AD +A+ ++ +Y Q+ + + A
Sbjct: 40 TTGTYIANRVTDKLTRVHDRIWCCRSGSAADTQAVADMVQHYLELYTMQYGEPSASTAAS 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +T+ Y+ + ++ G D++ KG VY+ GS + Y+ GSGST I +
Sbjct: 100 --LFSTICYENKDHLTAGIIVAGYDDKNKGEVYSIPLGGSVHKAPYAIAGSGSTFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D + +S+ E +D +K + A + D +G + +VVL + G R
Sbjct: 158 DKHFRE-------------DMSKEETIDFMKHSLSQAIKWDGSSGGVIRMVVLTEAGAER 204
>gi|326472773|gb|EGD96782.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326484953|gb|EGE08963.1| proteasome component Pre4 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 14/181 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPAM 60
Y L+R D ++ + V+ G +D++ + ++L + + Y ++ +
Sbjct: 62 YGSLARFTDLKRLRAFDNSSVVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNL 121
Query: 61 GQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
LS LY +R F P ++ ++ GLD+EGK + + D +G+ + G G+ L +
Sbjct: 122 HTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAV 181
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P L L P +D + +++ AVD +K C RD + D+ I V+ K+G
Sbjct: 182 PILRR--------LFPEEDGIDNITKERAVDAMKQCMRVLFYRDARSSDRYSIAVVTKEG 233
Query: 179 I 179
+
Sbjct: 234 V 234
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ K+ +G DV L +L + +Y+ + ++ + QL+S+T
Sbjct: 36 VSNNFEKVFNYG-HVFFGITGLATDVTTLNELFRYKTNLYKLREDRPIEPETFTQLVSST 94
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY +RF PY+ V+ G++++ GK + +D +G + + G+ S + ++ L
Sbjct: 95 LYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-L 153
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L A+D +S+A +A +RD +G + ++ KD + + Y++
Sbjct: 154 YEPN---LEAEDLFETISQA---------LLNAADRDALSGWGAVVYIIKKDKVVKRYLK 201
Query: 186 LRKD 189
+R+D
Sbjct: 202 MRQD 205
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
D K+ ++ DK + SG DV+ L++ + +Y + N+ M L+S+TLY
Sbjct: 38 DMKKVFQMGDKLFIGLSGLLTDVQTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYE 97
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS--YERVGYSSQGSGSTLIMPFLDNQLKSP 128
KRF PY+ V+ GLD + + D +G+ + + + G+ S + + K
Sbjct: 98 KRFGPYFVEPVVAGLDAKEGPFIAAMDLIGAPVFAK-DFVVSGTTSDELYGVCEAFWK-- 154
Query: 129 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRK 188
P + P E + + +A +RD G + V+ KDG+ + ++ RK
Sbjct: 155 -PNMGP----------DELFETISQSLLAAVDRDCLAGWGAIVHVITKDGVTTKQLKSRK 203
Query: 189 D 189
D
Sbjct: 204 D 204
>gi|374724463|gb|EHR76543.1| proteasome, beta component (T1A subfamily) [uncultured marine group
II euryarchaeote]
Length = 208
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G+ I ++ K+ K+ D + ++G ++L + LAA ++Q + +QM+
Sbjct: 36 GHFIANKSVQKLFKIGDNLALTTAGLVGHAQSLSRTLAAEVSLFQLRRQQQMTVKGAATF 95
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
+N L + P++ ++ G+D+EG G VY+ D+ G Y + GSGS + L++
Sbjct: 96 TANILAGR---PHWVQLLIVGVDDEG-GHVYSIDSAGGSIPDSYCATGSGSPYMYGVLED 151
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KDG 178
++ +A+ L ++ +RD +G+ +++ V+ KDG
Sbjct: 152 GFSE-------------GMTRTDALKLAARALHASGQRDAASGNGMDLAVITAKDG 194
>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
gi|62900679|sp|Q5W416.1|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Proteasome subunit beta-5i; Flags: Precursor
gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
multifunctional protease 7) [Canis lupus familiaris]
Length = 276
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+ G I S +K+I++ + SG AD + ++LLA +Y ++ +++S A
Sbjct: 93 TAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAAS 152
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LLSN +Y R +++ G D +G G +Y D G+ S GSGST +
Sbjct: 153 KLLSNMVYQYRGMDLSMGSMICGWDKKGPG-LYYVDQNGTRLSGNMFSTGSGSTYAYGVM 211
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ + PS LS EA +L + AT RD Y+G + + + +DG
Sbjct: 212 DSGYQ-PS------------LSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDG 255
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ K+ +A + + +G Q D+ ++ L R IY+ + N++M+ +LS+
Sbjct: 35 ISTDFKKVFHIAPRMFLGLTGLQTDILTVRDRLMFRKNIYETKENREMAPKPFSAMLSSF 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVG-SYERVGYSSQGSGSTLIMPFLDNQL 125
LY RF PY+ V+ GLD + K + D +G E + G+ + + +
Sbjct: 95 LYEHRFGPYFIEPVVAGLDPKTMKPFICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLW 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P Q L E A +V +A +RD +G + ++ KD I ++
Sbjct: 155 R---PDLEPDQ-----LFEVIAQSMV-----NAFDRDAMSGWGATVYIIEKDKITERTLK 201
Query: 186 LRKD 189
R D
Sbjct: 202 TRMD 205
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 6 SILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLS 65
+ ++ D K+ K+ DK + +GFQ+D + + + + R +Y+ + N+ + + +++S
Sbjct: 33 TTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMIS 92
Query: 66 NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQ 124
N Y RF Y++ ++ GLD+ K + D +G + + G+G ++ +N
Sbjct: 93 NLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENF 152
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
+ + P + L EA A ++ S ERD +G + + KD ++ +
Sbjct: 153 WREN---MKPDE-----LFEATAQSIL-----SCLERDAASGWGAVVYTITKDKVNVSTI 199
Query: 185 ELRKD 189
+ R D
Sbjct: 200 KARMD 204
>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ K + SG D + L + L +H +YQ + + M L+S
Sbjct: 35 VATDFQRVFKIHGKLYLGLSGLATDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ ++ GL + + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPIIAGLGEDNEPFICTMDCIGAKE 130
>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
Length = 192
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S + KI A + +G DV ++ LL + +Y+ + +Q+S + L+S++
Sbjct: 22 VSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNMYRLREERQISPQTLANLISSS 81
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ VL G+++ GK + +D++G + + G+ S D
Sbjct: 82 LYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDFAKDFIVSGTAS-------DQLF 134
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ L P L + + + +A +RD +G + ++ KD + + ++
Sbjct: 135 GTCEGLWEP------DLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 188
Query: 186 LRKD 189
R+D
Sbjct: 189 GRQD 192
>gi|390349452|ref|XP_003727222.1| PREDICTED: proteasome subunit beta type-2-like [Strongylocentrotus
purpuratus]
Length = 201
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 1 MSTGYSIL--SRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP 58
M+ G S+ D K+ L+ K +M +G D + + +Y+ ++ ++S
Sbjct: 19 MNAGRSVFVFKHDQEKMFPLSSKLLMLCAGESGDTVQFAEYIQKNIQLYKIRNGYELSPK 78
Query: 59 AMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTL 116
A L + + PY +L G D C++ D +GS ++V +++ G GS
Sbjct: 79 AAANFTRKNLADFLRSKTPYQVNLLLAGHDETDGPCLFYMDYLGSLQQVPFAAHGYGSYF 138
Query: 117 IMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
+ LD + ++ +AV+++K C +R I +I +++K
Sbjct: 139 TLSILDRHYRR-------------DMTRDQAVEVLKKCLLEVQKRFIVNLPTFQIRIVDK 185
Query: 177 DGIH 180
DGIH
Sbjct: 186 DGIH 189
>gi|190347256|gb|EDK39498.2| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
6260]
Length = 217
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPA 59
+TG I +R K+ ++ D SG AD +A+ ++ IY Q H+++ +
Sbjct: 40 TTGSYIANRVTDKLTQIHDTIYCCRSGSAADTQAIADIVKYYMQIYTSQLPHDEKPTTQI 99
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+ L YK + + G D + KG VY+ GS + Y+ GSGST I
Sbjct: 100 AANIFQE-LCYKNKDNLTAGIICAGYDEKNKGTVYSIPIGGSIHQQEYAIAGSGSTFIYG 158
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + K + + E V +KT + A + D +G + +VVL DG+
Sbjct: 159 WCNENYKK-------------DMEKDECVSFIKTALSEAIKWDGSSGGVIRMVVLTADGV 205
Query: 180 HRE 182
R+
Sbjct: 206 ERK 208
>gi|156844743|ref|XP_001645433.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
70294]
gi|156116095|gb|EDO17575.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y Q+ + + A
Sbjct: 40 TTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAVADIVQYHLEMYTAQYGEPSTEVAAS 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ TL Y+ + ++ G D KG VY+ GS R Y+ GSGS I +
Sbjct: 100 --IFKTLCYENKDNLTAGIIVAGYDEANKGQVYSIPLGGSVHRQPYAIAGSGSAFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +++ E ++ +K + A + D +G + +VVL KDG R
Sbjct: 158 DKNFKE-------------DMTKEETIEFMKHSLSQAIKWDGSSGGVIRMVVLTKDGAER 204
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV ++ LL + +Y+ + +Q++ + L+S++
Sbjct: 36 VSNNFPKIFNYAPSTYLGLTGLATDVASVSDLLRYKVNLYRLREERQIAPQTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF P++ VL G+++ GK + +D++G + + G+ S + + L
Sbjct: 96 LYEKRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGMCEG-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 155 WEPD---LGPEDLFETISQA---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 GRQD 206
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + +G DV + L + +Y+ + + +S M L+S++
Sbjct: 36 VSNNFPKIFSYGPSVYLGLTGLATDVSTVSDLFRYKVNMYRLREERNISPTTMANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV------GYSSQ---GSGSTLI 117
LY +RF P++ V+ GLD + GK + +D++G + G +S G+ L
Sbjct: 96 LYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLW 155
Query: 118 MP-FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
P L++Q++ P +D +S+A +A +RD +G + ++ K
Sbjct: 156 EPDLLNSQIQGP-------EDLFETISQA---------LLNAVDRDALSGWGAHVYIIEK 199
Query: 177 DGIHREYMELRKD 189
D + + ++ R+D
Sbjct: 200 DKVTKRLLKGRQD 212
>gi|302922263|ref|XP_003053429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734370|gb|EEU47716.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ AD V+ GF D+ +Q L RHLI Y ++
Sbjct: 62 YGSLARFTDVKRLRSFADSSVV---GFSGDISDMQYL--DRHLIELSLDEAYTSPDAPRL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + L+ LY +R F P ++ ++ GLD++ K + D +GS + G G
Sbjct: 117 NAANLHRYLAKLLYRRRSKFDPLWNHLLVAGLDDDDKPFLAAADLLGSTYSSPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + + P ++A L + AVD++K C RD + D + +
Sbjct: 177 AMLAQPIMRRHV--------PDEEAAQNLDKDGAVDIIKECMKVLFYRDARSLDSYSLAI 228
Query: 174 LNKDGIH 180
+ KDG+
Sbjct: 229 VTKDGVE 235
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
++ K+ + DK + G +D L++ R +Y+ + + + M L+S+TLY
Sbjct: 35 NFEKVFPVTDKVYIGLPGLASDTVTLRQQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQ 94
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPS 129
KRF PY+ V+ GL+++ + + D +G + G+ S + + L P+
Sbjct: 95 KRFGPYFVEPVIAGLNSKNEPFIAATDLIGCINFAKDFVVSGTASDKLFGMAE-ALWEPN 153
Query: 130 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
L +D +S++ +A +RD Y+G + ++ KD I + ++ R D
Sbjct: 154 ---LEPEDLFETISQS---------LMNAMDRDAYSGWGAVVWIIQKDQIIKRVLKSRMD 201
>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
Length = 205
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI +G DV L +L + +Y+ + N+ + L+S+T
Sbjct: 36 VSNNFEKIFHYG-HVFFGITGLATDVTTLNELFRYKTNMYKLKENRSIEPETFTNLVSST 94
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ V+ GL+++ GK + +D +G E + G+ S + ++ L
Sbjct: 95 LYSKRFGPYFVGPVVAGLNSKTGKPYIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-L 153
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L ++D +S+A +A +RD +G + ++ KD + + Y++
Sbjct: 154 YEPN---LESEDLFETISQA---------LLNAVDRDALSGWGAVVYIIKKDKVIKRYLK 201
Query: 186 LRKD 189
R+D
Sbjct: 202 TRQD 205
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ K+ +A + + +G Q D+ ++ L R IY+ + N++M+ +LS+
Sbjct: 35 ISTDFKKVFHIAPRMFLGLTGLQTDILTVRDRLMFRKNIYETKENREMAPKPFSAMLSSF 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVG-SYERVGYSSQGSGSTLIMPFLDNQL 125
LY RF PY+ V+ GLD + K + D +G E + G+ + + +
Sbjct: 95 LYEHRFGPYFIEPVVAGLDPKTMKPFICNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLW 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P Q +++ +A +RD +G + ++ KD I ++
Sbjct: 155 R---PDLEPDQ----------LFEVISQSMVNAFDRDAMSGWGATVYIIEKDKITERSLK 201
Query: 186 LRKD 189
R D
Sbjct: 202 TRMD 205
>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 198
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + +G DV + L + +Y+ + + +S M L+S++
Sbjct: 22 VSNNFPKIFSYGPSVYLGLTGLATDVSTVSDLFRYKVNMYRLREERNISPTTMANLVSSS 81
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV------GYSSQ---GSGSTLI 117
LY +RF P++ V+ GLD + GK + +D++G + G +S G+ L
Sbjct: 82 LYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLW 141
Query: 118 MP-FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
P L++Q++ P +D +S+A +A +RD +G + ++ K
Sbjct: 142 EPDLLNSQIQGP-------EDLFETISQA---------LLNAVDRDALSGWGAHVYIIEK 185
Query: 177 DGIHREYMELRKD 189
D + + ++ R+D
Sbjct: 186 DKVTKRLLKGRQD 198
>gi|358395880|gb|EHK45267.1| hypothetical protein TRIATDRAFT_38957 [Trichoderma atroviride IMI
206040]
Length = 261
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 29/196 (14%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ A ++ GF D+ +Q L RHL Y+ ++
Sbjct: 62 YGSLARFTDVKRLRPFAGSSIL---GFSGDISDMQYL--DRHLTELSLSEAYESPDKPRL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + LS LY +R F P ++ ++GGLD+ G+ + D +GS + G G
Sbjct: 117 NAANLHRYLSKLLYNRRSKFDPLWNHLLVGGLDDNGEPFLAAADLLGSTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
+ L P + +P +++ LS EAVD+VK RD + + V
Sbjct: 177 AMLAQPIMRR--------YVPDEESAKKLSREEAVDIVKEAMKVLFYRDARSMSTYSLAV 228
Query: 174 LNKDGIHREYMELRKD 189
+ KDG+ EL++D
Sbjct: 229 VTKDGV-----ELKED 239
>gi|405951012|gb|EKC18961.1| Proteasome subunit beta type-6 [Crassostrea gigas]
Length = 218
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ K+ DK SG AD +A+ +++ HL +Q + +
Sbjct: 38 TTGAYIANRVTDKLTKITDKIYCCRSGSAADTQAVADIVS-YHLNFQKMDMGEEPKVKVA 96
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ L Y + ++GG D G VY G R+ +++ GSGST I ++
Sbjct: 97 ANIFRELCYNNRDNLSAGIIVGGWDKTEGGQVYAIPLGGMLTRMPFTTGGSGSTYIYGYV 156
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K T +++ E + V A RD +G + + +NKDG+ R
Sbjct: 157 DANFK-------------TGMTKEECLKFVANGVGLAISRDGSSGGVVRLAAINKDGVER 203
>gi|307198388|gb|EFN79330.1| Proteasome subunit beta type-2 [Harpegnathos saltator]
Length = 207
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 17/183 (9%)
Query: 1 MSTGYSI--LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP 58
M+T SI + D KI K++DK VMA+SG D + + +Y+ ++ ++S
Sbjct: 19 MTTTQSIIVMKSDEHKIHKISDKLVMATSGESGDTTQFSEYIGKNIQLYKMRNGYELSPK 78
Query: 59 AMGQLLSNTL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTL 116
A L Y + PY+ ++ G D++ +Y D + S +V Y++ G G
Sbjct: 79 AAACFTRRNLADYLRSRTPYFVNMLMAGYDDDAGPELYFIDYLASCVKVPYATHGYGGMF 138
Query: 117 IMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
M LD K +E EA L+K C +R I + ++ ++K
Sbjct: 139 SMSVLDRYYKHDC-------------TEQEAYALLKKCVQEIHKRLIVSLPNFKVQKVSK 185
Query: 177 DGI 179
DGI
Sbjct: 186 DGI 188
>gi|145534101|ref|XP_001452795.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420494|emb|CAK85398.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 2 STGYSILS--RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPA 59
S +SIL KI+KL D + SG AD + +++ H + +++ M+
Sbjct: 20 SIAHSILKIKETEDKILKLDDHKIFGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQE 79
Query: 60 MGQLLSNTLYYK----RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
+ ++Y + R P+ +LGG+D++G +Y D +GS +++ +QG +
Sbjct: 80 TAHFV-RSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANY 138
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
++ LDNQ K P+ L + E ++++K C R + +K + ++
Sbjct: 139 FLLGLLDNQYK-PN------------LIKEEGIEIIKKCIKELQTRFLIAQNKFIVKIVT 185
Query: 176 KDGI 179
K GI
Sbjct: 186 KQGI 189
>gi|50540284|ref|NP_001002609.1| proteasome subunit beta type-2 [Danio rerio]
gi|49900459|gb|AAH75983.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Danio rerio]
Length = 199
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ DY K+ KL++K ++ G D + + +Y+ ++ ++S A
Sbjct: 28 MKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKN 87
Query: 68 L--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
L Y + PY+ +L G D +Y D + + + +++ G G+ L + LD
Sbjct: 88 LADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFAAHGYGAFLTLSILDRYY 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ L+ EAVDL+K C +R I + +++KDGIH
Sbjct: 148 RPD-------------LTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDKDGIH 189
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K+ ++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 70 SLGPMVSSKDVQKVEEVHPTGALTIAGSVSAAQSLISSLRAEVRLYESRRGEDMSMQALS 129
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L+ N L F Y +LGG+D++G +Y+ D GS Y+ GSGS + L
Sbjct: 130 TLVGNFLRTGGF--YIVQPILGGVDDDGA-HIYSIDPAGSILEEEYTVTGSGSQYALGVL 186
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + LS EA + SA ERD+ +G+ + I V+ +G+
Sbjct: 187 EQEFSD-------------DLSIDEAKQVATKAIRSAVERDLASGNGINIAVVTDEGV 231
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S D+ K+ +A + + +G Q D+ ++ L R +Y+ + N++M+ +LS+
Sbjct: 35 ISTDFKKVFHIAPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMAPKPFSAMLSSF 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVG-SYERVGYSSQGSGSTLIMPFLDNQL 125
LY RF PY+ V+ GLD + K V D +G E + G+ + + +
Sbjct: 95 LYEHRFGPYFIEPVVAGLDPKTLKPFVCNMDLIGCPNEPDDFVVAGTCAEQLYGMCETLW 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
K P L P Q +++ +A +RD +G + ++ KD I ++
Sbjct: 155 K---PDLQPDQ----------LFEVIAQSMMNAFDRDAMSGWGATVYIIEKDKITERSLK 201
Query: 186 LRKD 189
R D
Sbjct: 202 TRMD 205
>gi|412988611|emb|CCO17947.1| predicted protein [Bathycoccus prasinos]
Length = 245
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 1 MSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ----HNKQMS 56
+STG I +R K+ L + VMA SG AD +A+ + RH Q + H + M
Sbjct: 34 VSTGTYISNRASDKMCNLTENVVMARSGSAADTEAVAGFV--RHHCAQREIELAHGETME 91
Query: 57 CPAMGQLLSNTLYYKRFFPYYS----FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 112
+ ++L+ Y + + + + G D + VY+ A G+ + +++ GS
Sbjct: 92 VKQVARILTKINYENKNANNGTGLGCYAIAAGWDEKFGAQVYSCTAGGNMIKTSWTTDGS 151
Query: 113 GSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 172
GST I FLD++ K + + L+ A AVD +G +
Sbjct: 152 GSTYIWGFLDSEFKERMTREECEKYVLKALTLAMAVDS-------------SSGGCARLC 198
Query: 173 VLNKDGIHREYME 185
+NKDG R +++
Sbjct: 199 TVNKDGCFRRFIK 211
>gi|383864554|ref|XP_003707743.1| PREDICTED: proteasome subunit beta type-2-like [Megachile
rotundata]
Length = 207
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
++ D KI K++DK VMA SG D + + +Y+ ++ ++S A
Sbjct: 27 VMKNDEQKIHKMSDKLVMAVSGQSGDTIQFSEYIGKNIQLYKMRNGYELSPKAAASFTRR 86
Query: 67 TL--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 124
L Y + PY+ ++ G DN +Y D + S RV Y++ G G + LD
Sbjct: 87 NLADYLRSTTPYFVNLLMAGYDNNNGPELYFIDYLASCVRVPYAAHGYGGFFSLSILDRY 146
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
K S +E EA L+K C +R I ++ ++KDGI
Sbjct: 147 HKYDS-------------TEEEAYILMKKCVREIHKRLIVNLPNFKVQKVSKDGI 188
>gi|448729602|ref|ZP_21711917.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
gi|445794904|gb|EMA45442.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
Length = 232
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K++++ + +G + ++L L A +Y+ + + MS A+
Sbjct: 59 SAGNMVASKDARKVLEVHPTAALTIAGSVSAAQSLVNSLQAEVRLYETRRDTGMSLEALA 118
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +N L F + VLGG+D++G VY+ GS Y+ GSGS + L
Sbjct: 119 NLTANLLRSGNF--HIVQPVLGGVDDDGS-HVYSIGPGGSVMAEDYAVSGSGSPFALGVL 175
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA----SATERDIYTGDKLEIVVLNKD 177
+ + E +VD +T A SATERD +G+ L + + D
Sbjct: 176 EQEYD-----------------EGMSVDDAETIAARAVQSATERDTASGNGLTLATITAD 218
Query: 178 GI 179
G+
Sbjct: 219 GV 220
>gi|255574159|ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
gi|223532621|gb|EEF34407.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
Length = 231
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q+ PA
Sbjct: 31 STGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATV 86
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 87 KVAANLV---RLISYNNKNMLETGLIVGGWDKYDGGKIYGIPLGGTIIEQPFAIGGSGSS 143
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 144 YLYGFFDQAWKEG-------------MTKDEAEQLVVKAVSLAMARDGASGGVVRTVIIN 190
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 191 SEGVTRNF 198
>gi|189193573|ref|XP_001933125.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978689|gb|EDU45315.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 260
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPAMG 61
Y L+R D ++ K D+ V+ G +D++ L +LL + + + ++ ++ +
Sbjct: 62 YGSLARFTDVKRLRKFNDEVVVGFGGDVSDMQYLDRLLNSLDIRENYSSSENSLNAKNLH 121
Query: 62 QLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ +Y +R F P ++ ++ G+D E K + + D +G+ + G G+ L P
Sbjct: 122 TYLAKVMYNRRSKFDPLWNHMLIVGMDGEKKPFLASADLLGTTFSSPSLATGFGAHLAQP 181
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L +LP + AV ++ +AV+ +K C RD + DK I V+ KDG+
Sbjct: 182 ILRT--------ILPDEAAVENVTREQAVEKIKECMKVLFYRDARSMDKYSIAVVTKDGV 233
>gi|424814263|ref|ZP_18239441.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
gi|339757879|gb|EGQ43136.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
Length = 216
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G + ++ KI +L D+ + +G D + + +++ ++ L + +++S G L
Sbjct: 41 GRLVSNKHAQKIYELDDEIGLTIAGSVGDAQKVVRMMRSQ-LNMKKLETRELSVKGAGTL 99
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLD 122
L+N L+ + P+ + VLGG+ EG+G +Y+ D G Y++ GSGS + L+
Sbjct: 100 LANILHANKMMPFMNQFVLGGI-QEGEGILYSLDPAGGLMPHEDYTATGSGSQMAFGVLE 158
Query: 123 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV-VLNKDG 178
+ + +S E +L SA ERD +G+ + + + +DG
Sbjct: 159 DGFEH-------------GISHEEGKELAMNAVKSAMERDTASGNGIMVAEITEEDG 202
>gi|357110830|ref|XP_003557219.1| PREDICTED: proteasome subunit beta type-6-like [Brachypodium
distachyon]
Length = 242
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q PA
Sbjct: 42 STGMYVANRASDKISQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQSGQPATV 97
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ SN L Y+ + ++GG D G +Y+ G+ R ++ GSGS+ +
Sbjct: 98 KVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGGTILRQPFAIGGSGSSYLY 157
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+D++ K +++ EA V + A RD +G + V +N +G
Sbjct: 158 GLMDHEWKE-------------GMTQEEAEKFVVKVVSLAIARDGASGGVVRTVTINAEG 204
Query: 179 IHREY 183
+ R +
Sbjct: 205 VKRSF 209
>gi|119638448|gb|ABL85039.1| proteasome [Brachypodium sylvaticum]
Length = 242
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q PA
Sbjct: 42 STGMYVANRASDKISQLTDNVYVCRSGSAADTQVISDYV--RYFL--HQHTIQSGQPATV 97
Query: 62 QLLSNT---LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
++ SN L Y+ + ++GG D G +Y+ G+ R ++ GSGS+ +
Sbjct: 98 KVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGGTILRQPFAIGGSGSSYLY 157
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
+D++ K +++ EA V + A RD +G + V +N +G
Sbjct: 158 GLMDHEWKE-------------GMTQEEAEKFVVKVVSLAIARDGASGGVVRTVTINAEG 204
Query: 179 IHREY 183
+ R +
Sbjct: 205 VKRSF 209
>gi|354548652|emb|CCE45389.1| hypothetical protein CPAR2_704030 [Candida parapsilosis]
Length = 206
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + DK MA +G DV L +L + +Y+ + + + + L+S++
Sbjct: 36 VSNNFEKIFEFGDKTYMALTGLATDVITLHELFKFKTNLYKLREERSIEPSTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQL 125
LY +RF P++ ++ GL + + K + +D++G + + G+ + + + L
Sbjct: 96 LYERRFGPWFVGPIVAGLSSKDNKPFICGFDSIGCIDFSHDFIVSGTATDQLYGMCEG-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 155 YEPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAVVYIITKDKVVKRVLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 16/186 (8%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
GY +LS++ K+ + + +G D + + + L Y+ Q +++ + ++
Sbjct: 41 GY-VLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQLGREIRVRGLAKI 99
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
LS LY + P + V+GG D +G +Y D VGS Y + GSG + + ++
Sbjct: 100 LSLILYSYKLAPLMTEVVVGGFDEKGP-QIYVLDPVGSLIEDKYVALGSGGPIALGIIEK 158
Query: 124 QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH-RE 182
+ + + EA L + A ERD +GD ++++ + ++G RE
Sbjct: 159 EYRE-------------DIDVDEAEKLAVSAIREAIERDAVSGDGVDVLRITEEGYSLRE 205
Query: 183 YMELRK 188
YM R+
Sbjct: 206 YMFRRE 211
>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 90 STGSYVDTCEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 149
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y DA G+ S GSGS L
Sbjct: 150 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDANGNRLSGRMFSTGSGSNYAYGVL 208
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
D+ K ++ EA +L + AT RD Y+G
Sbjct: 209 DSGYKE-------------DMTVEEAYELGRRGIVHATHRDSYSG 240
>gi|442750345|gb|JAA67332.1| Putative 20s proteasome regulatory subunit beta type psmb2/pre1
[Ixodes ricinus]
Length = 202
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 2 STGYSI--LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPA 59
++GYSI L D KI KL+D +MA G D + +A +Y+ ++ ++S A
Sbjct: 20 TSGYSIIVLKHDEDKIHKLSDNLLMAVCGEAGDTVQFAEFIAKNIQLYKMRNGYELSPTA 79
Query: 60 MGQLLSNTL--YYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVGSYERVGYSSQGSGSTL 116
L Y + PY +L G D + + ++ D + + +V Y + G G+
Sbjct: 80 AANFTRRNLADYLRSRTPYSVNLLLAGFDKQAAQPELFYMDYLATMAKVPYGAHGYGAFF 139
Query: 117 IMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 176
++ LD + ++E EAVDL+K C +R + ++ +++K
Sbjct: 140 LISVLDRYYRED-------------MNEEEAVDLLKKCVFEVQKRFLVNLPAFKVQLVDK 186
Query: 177 DGIH 180
+GI
Sbjct: 187 NGIR 190
>gi|147903930|ref|NP_001085540.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
laevis]
gi|49119183|gb|AAH72908.1| MGC80364 protein [Xenopus laevis]
gi|77748113|gb|AAI06263.1| MGC80364 protein [Xenopus laevis]
Length = 199
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ +D K+ K+++K ++ G D + + +Y+ ++ ++S A
Sbjct: 28 MKQDVDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRN 87
Query: 68 L--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
L Y + PY+ +L G D +Y D + + + +++ G G+ L + LD
Sbjct: 88 LADYLRSRTPYHVNLLLAGYDEHEGPSLYYMDYLAALAKTRFAAHGYGAYLTLSILDRYY 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
K L+ EAV+L+K C A +R I + + V++KDGIH
Sbjct: 148 KPD-------------LTREEAVELLKKCIAELQKRFILSLPSFTVRVIDKDGIH 189
>gi|384247128|gb|EIE20616.1| proteasome-domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 236
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH--NKQMSCPA 59
STG I +R K+ +L D+ + SG AD +A+ + ++ ++QHQ N ++
Sbjct: 43 STGNYIANRVTDKVTQLTDRVYVCRSGSAADTQAISSYV--QYYLHQHQMELNDEILVKT 100
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L + +Y + ++ G D+ G VY G+ +V +S GSGS I
Sbjct: 101 AATLATKLVYSNKEMLQAGL-IVAGYDSREGGQVYALPLGGTLVKVPFSIGGSGSAYIYG 159
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
F D + P +SE + V A RD +G + VV+ KDG+
Sbjct: 160 FCDKNWR-------PG------MSEEDCQAFVVKAVGLALARDGSSGGCIRTVVITKDGV 206
Query: 180 HREYMELRK 188
R ++ K
Sbjct: 207 RRSFLPNNK 215
>gi|367007118|ref|XP_003688289.1| hypothetical protein TPHA_0N00740 [Tetrapisispora phaffii CBS 4417]
gi|357526597|emb|CCE65855.1| hypothetical protein TPHA_0N00740 [Tetrapisispora phaffii CBS 4417]
Length = 216
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ + +Y Q + S
Sbjct: 40 TTGSYIANRVTDKLTRVQDKIWCCRSGSAADTQAVADIVQYQLELYTAQFG-EPSTKVAA 98
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ Y + V G D E KG VY+ GS + Y+ GSGS I +
Sbjct: 99 SIFKTMCYDNKDNLSAGIIVAGFDDKENKGEVYSIPLGGSLHKQKYAIAGSGSAFIYGYC 158
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +++ E V+ +K + A + D +G + +VVL KDG+ R
Sbjct: 159 DKNFKD-------------DMTKDETVNFMKHSLSQAIKWDGSSGGVIRMVVLTKDGVER 205
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 11 DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYY 70
++ KI K+ D+ + +G Q+D + +LL Y+ + N+ +S A G L+ Y
Sbjct: 39 NFQKIYKMTDQIFIGFNGLQSDAQTFAQLLTYEVNSYKLRENRDISPEAFGSLVRTKQYQ 98
Query: 71 KRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 130
R+ PY+ V+ GLD G+ V D +G+ Y+ + + S L ++
Sbjct: 99 HRWGPYFVEPVIAGLDKNGEPYVNAMDTIGAGI---YTPKFAISATCAESLYGTCEAFY- 154
Query: 131 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
+D + P E +++ C ++ +RD Y+G + ++ D I ++ R D
Sbjct: 155 -----KDNMEP---EELFEVISQCLLASVDRDAYSGWGGIVYIITPDRIIERRLKTRMD 205
>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
Length = 212
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPA 59
STG I +R KI L D SG AD +A+ + +H I QHQ + ++
Sbjct: 23 STGNYIANRVTDKITPLCDNVYTLRSGSAADTQAIAGYV--QHFIAQHQAEEGEHINVKT 80
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ Y + ++ G D G G V++ G+ ++ GSGST I
Sbjct: 81 AANLVKMMAYNNKDNLQAGL-IVAGYDKHGGGQVFSISLGGTITETSFAMSGSGSTYING 139
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
F+D + +SE EA+D V A D +G + V + G+
Sbjct: 140 FVDKYWRE-------------GMSEQEAMDFVTKALRYAMTWDASSGGCMRTVTITASGV 186
Query: 180 HREYM 184
R ++
Sbjct: 187 KRTFI 191
>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ ++ K+ K + SG +D + L + L +H +YQ + + M L+S
Sbjct: 35 VATDFQRVFKIHGKLYIGLSGLASDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSAL 94
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 103
LY KRF PY+ ++ GL + + T D +G+ E
Sbjct: 95 LYEKRFGPYFCQPIIAGLGENDQPFICTMDCIGAKE 130
>gi|448733559|ref|ZP_21715802.1| proteasome subunit beta [Halococcus salifodinae DSM 8989]
gi|445802448|gb|EMA52753.1| proteasome subunit beta [Halococcus salifodinae DSM 8989]
Length = 231
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+D K++++ + SG + ++L L A +Y+ + + MS A+
Sbjct: 58 SAGNMVASKDAQKVLEVHPTAALTISGSVSAAQSLVNSLQAEVRLYETRRDTGMSLEALA 117
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L +N L F VLGG+D++G VY GS Y+ GSGS PF
Sbjct: 118 NLTANLLRSGNFQIVQP--VLGGVDDDGS-HVYGIGPGGSVMAEDYAVSGSGS----PFA 170
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L+ + +DA T + SATERD +G+ L + + DG+
Sbjct: 171 LGVLEQEYDVGTSVEDAKT---------IAARAVQSATERDTASGNGLTLATITADGV 219
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G + S+ K++ ++ + +G AD + L + +++ Q+ + MS
Sbjct: 1354 SIGNFVGSKTVQKVLPVSSSILGTMAGGAADCSFWIRFLRQQARLHEVQNKRSMSVARSS 1413
Query: 62 QLLSNTLYYKRFFPYYSF-NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
++LSN LY R S +++ G D +Y D G+ R S GSGST +
Sbjct: 1414 RILSNALYQYRGLGDLSVGSMIMGYDAREGFSIYYVDNTGARIRGEVFSVGSGSTFALGI 1473
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
LD +L+ ++EAEA+ L AT RD +G + + ++ K+G
Sbjct: 1474 LDTELR-------------YDMTEAEAISLGIKAIRHATARDAMSGGYIGVYLITKEGWA 1520
Query: 181 REYME 185
+ Y E
Sbjct: 1521 KVYSE 1525
>gi|383127955|gb|AFG44635.1| hypothetical protein CL406Contig2_01, partial [Pinus taeda]
Length = 86
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
++ D+ +I K+ DK + SG DV+ L + A RH +YQ + + M L+S
Sbjct: 6 IATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFASLVSAL 65
Query: 68 LYYKRFFPYYSFNVLGGLDNE 88
LY KRF PY+ V+ GL +
Sbjct: 66 LYEKRFGPYFCQPVIAGLGED 86
>gi|70937358|ref|XP_739497.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516540|emb|CAH84497.1| hypothetical protein PC301073.00.0 [Plasmodium chabaudi chabaudi]
Length = 128
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S ++ +S +++KI K+ D + SG D+++L +LL R +YQ + +M+
Sbjct: 17 SNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETEMNIDCFS 76
Query: 62 QLLSNTLYYKRFFPYY------SFNVLGGLDNEG-KGCVY-----TYDAVGS 101
+LSN LY RF PY+ F V +D G K VY YD +G+
Sbjct: 77 NMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYLNAYDLIGA 128
>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 245
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ K+ + DK MA +G DV L++L + +Y+ + + + + L+S++
Sbjct: 75 VSNNFEKVFEFGDKTYMALTGLATDVITLRELFKFKTNLYKLREERSIEPSTLANLVSSS 134
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY +RF P++ ++ GL + + K + +D++G + + G+ + + + L
Sbjct: 135 LYERRFGPWFVGPIVAGLSSKDNKPFICGFDSIGCIDYSHDFIVSGTATDQLYGMCEG-L 193
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 194 YEPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAVVYIITKDKVVKRVLK 241
Query: 186 LRKD 189
R+D
Sbjct: 242 TRQD 245
>gi|348519415|ref|XP_003447226.1| PREDICTED: proteasome subunit beta type-2-like [Oreochromis
niloticus]
Length = 199
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 15/175 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ DY K+ KL++K ++ G D + + +Y+ ++ ++S A
Sbjct: 28 MKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPAAAANFTRKN 87
Query: 68 L--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
L Y + PY+ +L G D+ +Y D + S + +++ G G+ L + LD
Sbjct: 88 LADYLRSRTPYHVNLLLAGYDDTDGPGLYYMDHLSSLAKAPFAAHGYGAYLTLSILDRYY 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ LS EAVDL+K C +R I + +++K+GIH
Sbjct: 148 RPD-------------LSRDEAVDLLKKCVEELKKRFILNLPSFTVRLIDKEGIH 189
>gi|302828808|ref|XP_002945971.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
gi|300268786|gb|EFJ52966.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
Length = 223
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPA 59
STG + +R KI L D SG AD +A+ + +H I QHQ ++
Sbjct: 36 STGNYVANRVTDKITPLCDNVYTLRSGSAADTQAIAGYV--QHFIAQHQAEEGDHVTVKT 93
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
L+ Y + ++ G D G G VY+ G+ +S GSGST I
Sbjct: 94 AANLVKMMAYNNKDIMQAGL-IVAGFDKYGGGQVYSISLGGTITATPFSMSGSGSTYING 152
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
F D + +SE EA+D V A D +G + V + G
Sbjct: 153 FCDKYWRE-------------NMSEEEAMDFVTRALRYAMTWDASSGGCIRTVTITAAGT 199
Query: 180 HREYME 185
R++++
Sbjct: 200 KRQFIQ 205
>gi|315045598|ref|XP_003172174.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
gi|311342560|gb|EFR01763.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPAM 60
Y L+R D ++ + V+ G +D++ + ++L + Y ++ +
Sbjct: 62 YGSLARFTDLKRLRAFDNSSVVGFGGDISDMQYIDRVLNTLDIQENYSTYGEHSLNAKNL 121
Query: 61 GQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
LS LY +R F P ++ ++ GLD+EGK + + D +G+ + G G+ L +
Sbjct: 122 HTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAV 181
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P L L P +D + +++ AVD +K C RD + D+ I V+ K+G
Sbjct: 182 PILRR--------LFPEEDGIDNITKEAAVDAMKQCMRVLFYRDARSSDRYSIAVVTKEG 233
Query: 179 I 179
+
Sbjct: 234 V 234
>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|302595759|sp|C3NHF1.1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
Length = 211
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCP 58
S G+ + ++ K++ + DK + ++G AD++ + +L IY + + + +S
Sbjct: 38 SAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKN---IYHYNNITKYGPISIK 94
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
+ L+N L ++FPY ++GG D++ + ++ D +G Y + GSGS + M
Sbjct: 95 GIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAM 152
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+++ L EA DL K SA +RD +TG + + ++ G
Sbjct: 153 GVLEDEYNPKMTL-------------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG 199
Query: 179 IHRE 182
H E
Sbjct: 200 -HEE 202
>gi|15235889|ref|NP_194858.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|334187059|ref|NP_001190879.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|82581522|sp|Q8LD27.2|PSB6_ARATH RecName: Full=Proteasome subunit beta type-6; AltName: Full=20S
proteasome beta subunit A-1; AltName: Full=Proteasome
component D; AltName: Full=Proteasome subunit beta
type-1; Flags: Precursor
gi|2511594|emb|CAA74028.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421099|gb|AAC32065.1| 20S proteasome subunit PBA1 [Arabidopsis thaliana]
gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
gi|16323318|gb|AAL15414.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
gi|332660487|gb|AEE85887.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|332660489|gb|AEE85889.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
Length = 233
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG + +R KI +L D + SG AD + + + R+ + HQH Q PA
Sbjct: 33 STGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQHGQPATV 88
Query: 62 QLLSNTLYYKRFFPYYSFNVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGST 115
++ +N + R Y + N+L GG D G +Y G+ ++ GSGS+
Sbjct: 89 KVSANLI---RMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSS 145
Query: 116 LIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 175
+ F D K +++ EA LV + A RD +G + V++N
Sbjct: 146 YLYGFFDQAWKDN-------------MTKEEAEQLVVKAVSLAIARDGASGGVVRTVIIN 192
Query: 176 KDGIHREY 183
+G+ R +
Sbjct: 193 SEGVTRNF 200
>gi|91086657|ref|XP_967917.1| PREDICTED: similar to proteasome beta 2 subunit-like protein
[Tribolium castaneum]
gi|270009752|gb|EFA06200.1| hypothetical protein TcasGA2_TC009049 [Tribolium castaneum]
Length = 202
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 1 MSTGYSIL--SRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP 58
M+ +SI+ D K+ KL++K MA +G Q D + +A +Y+ ++N ++S
Sbjct: 19 MTNAHSIMVMKTDEDKLYKLSNKLAMAIAGEQGDTNQFAEYIAKNVQLYKMRNNYELSPK 78
Query: 59 AMG----QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 114
++L++ L + PY+ +L G DN+ +Y D + S V Y++ G G
Sbjct: 79 EASHFTRRILADNLRSRT--PYHVNLLLAGYDNQEGPQLYFMDYLASVASVDYAAHGYGG 136
Query: 115 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 174
+ +D LP +++ + +L+K C R I ++ V+
Sbjct: 137 YFSLSIMDRN-------YLPT------MTKDQGYELLKKCVKEVHTRLIVNLPNFKVQVV 183
Query: 175 NKDGIH 180
+KDG+H
Sbjct: 184 DKDGVH 189
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI A + +G DV + L + +Y+ + + ++ + L+S++
Sbjct: 36 ISNNFPKIFNYAPSTYLGLTGLATDVNTVSDLFRYKVNMYRLREERDIAPQTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLD-NEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ VL G++ GK + +D++G + + G+ S + +
Sbjct: 96 LYEKRFGPYFVSPVLAGINPTTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLW 155
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P +D +S+A SA +RD +G ++ ++ KD + + ++
Sbjct: 156 E---PDLAP-EDLFETISQA---------LLSAVDRDALSGWGAQVYIIEKDKVTQRLLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 GRQD 206
>gi|146416491|ref|XP_001484215.1| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
6260]
Length = 217
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPA 59
+TG I +R K+ ++ D SG AD +A+ ++ IY Q H+++ +
Sbjct: 40 TTGSYIANRVTDKLTQIHDTIYCCRSGSAADTQAIADIVKYYMQIYTSQLPHDEKPTTQI 99
Query: 60 MGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+ L YK + + G D + KG VY GS + Y+ GSGST I
Sbjct: 100 AANIFQE-LCYKNKDNLTAGIICAGYDEKNKGTVYLIPIGGSIHQQEYAIAGSGSTFIYG 158
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
+ + K + + E V +KT + A + D +G + +VVL DG+
Sbjct: 159 WCNENYKK-------------DMEKDECVSFIKTALSEAIKWDGSSGGVIRMVVLTADGV 205
Query: 180 HRE 182
R+
Sbjct: 206 ERK 208
>gi|169602118|ref|XP_001794481.1| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
gi|160706087|gb|EAT89142.2| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
Length = 195
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + D + +G DV + L + +Y+ + + +S M L+S++
Sbjct: 22 ISNNFPKIFQYGD-VFLGLTGLATDVATVSDLFRYKVNMYRLREERNISPQTMANLVSSS 80
Query: 68 LYYKRFFPYYSFNVLGGLD-NEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF PY+ V+ G++ GK + +D++G + + G+ S D
Sbjct: 81 LYEKRFGPYFVSPVIAGINQTTGKPFICGFDSIGCIDFAKDFIVSGTAS-------DQLF 133
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ L P D V+ + + + +A +RD +G + ++ KD + + ++
Sbjct: 134 GTCEGLWEP--DLVSSQGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLK 191
Query: 186 LRKD 189
R+D
Sbjct: 192 GRQD 195
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI +++ K + +G +DV L++L + +Y+ + + + + L+S++
Sbjct: 36 VSNNFEKIFEISPKTYLGLTGLASDVLTLKELFRFKTNLYKLREDHSIEPSTLANLISSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY +RF P++ ++ GLD++ K + +D++G + + G+ S + ++ L
Sbjct: 96 LYERRFGPWFVSPIVAGLDSKTNKPFICGFDSIGCIDYSHDFIVSGTASDQLYGMCES-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L E + + +A +RD +G + ++ KD + + ++
Sbjct: 155 YEPN------------LEPEELFETISQALLNAVDRDALSGWGAVVYIITKDKVTKRVLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I S++ KII++ D + +G AD +++L+ +Y+ ++ +++S
Sbjct: 100 SQGSYIASQEVKKIIQINDFLLGTMAGGAADCSYWERVLSKLCRLYELRNGERISVAGAS 159
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
++++N ++ R + + ++ G D +G Y D GS + S GSGS L
Sbjct: 160 KMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYV-DNEGSRVKDCKFSVGSGSLYAYGVL 218
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
D+ + L++ EA+DL K AT RD +G + + +NK+G+
Sbjct: 219 DSGYR-------------YDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQINKNGV 263
>gi|323448817|gb|EGB04711.1| hypothetical protein AURANDRAFT_55099 [Aureococcus anophagefferens]
Length = 274
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%)
Query: 4 GYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQL 63
G I S + +++ L+D +M +SG AD +++ + Y M QL
Sbjct: 81 GMMITSSVFDRVVPLSDVVLMGTSGCAADCESMTHDVRTEAERYIVGAKLSMDASVAAQL 140
Query: 64 LSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 123
S +Y +R FP++ V+ GLD+ G G V+ +D++GS + GS ++ LD
Sbjct: 141 CSGAMYARRGFPHHMSLVVCGLDSVGFGRVFVFDSIGSLMEGPTVTAGSAREVLQSVLDG 200
>gi|452819220|gb|EME26285.1| 20S proteasome subunit beta 1 [Galdieria sulphuraria]
Length = 227
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPAM 60
+TG I +R KI L+++ SG AD +A+ + R+ + HQ + + C
Sbjct: 48 TTGAYIANRVSDKITPLSERIYCCRSGSAADTQAIADYV--RYYLSIHQLDLDDLPCVKT 105
Query: 61 GQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 120
+ L Y + + G D G VYT G+ R YS GSGST I F
Sbjct: 106 AASICRELCYSNKDRLLAGIICAGWDPLYGGQVYTIPLGGTMIRQPYSIGGSGSTYIYGF 165
Query: 121 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
D + +S + +D K A A RD +G + +VV+ K G+
Sbjct: 166 CDAHFQK-------------GMSREQCIDFTKKAVALAMARDGSSGGVIRLVVIEKQGVW 212
Query: 181 REYM 184
RE +
Sbjct: 213 REMI 216
>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
gi|84028246|sp|P28064.3|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
Full=Macropain subunit C13; AltName: Full=Multicatalytic
endopeptidase complex subunit C13; AltName:
Full=Proteasome component C13; AltName: Full=Proteasome
subunit beta-5i; Flags: Precursor
gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
norvegicus]
gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
[Rattus norvegicus]
Length = 276
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + +K+I++ + SG AD + ++LLA +Y ++ +++S A
Sbjct: 93 SAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAAS 152
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LLSN + R +++ G D +G G Y D G+ S GSG+T +
Sbjct: 153 KLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYV-DDNGTRLSGQMFSTGSGNTYAYGVM 211
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ + QD LS EA DL + AT RD Y+G + + + KDG
Sbjct: 212 DSGYR---------QD----LSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDG 255
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + DK + +G DV +L++L + +Y+ + + + + L+S++
Sbjct: 36 VSNNFEKIFSVGDKTFLGLTGLATDVISLKELFRFKTNLYKLREERNIEPSTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQL 125
LY +RF P++ ++ GL + + K + +D++G + + G+ S + ++ L
Sbjct: 96 LYERRFGPWFVSPIVAGLSSKDNKPFICGFDSIGCIDFSHDFIVSGTASDQLYGMCES-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 155 YEPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAVVYIVTKDKVIKRVLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 5 YSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLL 64
+ +S ++ KI K +K ++ G DV L + +Y+ + +++ A+ ++
Sbjct: 32 FMTVSTEFQKIFKATEKTLIGLPGLATDVITLADRFRFKTNMYKMREEREIEPKALAHMV 91
Query: 65 SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVG 100
S+TLY +RF PY+ V+ GLD K + + D +G
Sbjct: 92 SSTLYERRFGPYFVEPVIAGLDKHNKPFICSMDLIG 127
>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
Length = 191
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ ++ +I ++D + SG DV + L R +Y + N++M L+S+
Sbjct: 22 IGHEFQRIYGMSDHLYIGFSGLATDVTTVSNKLKFRLNMYMLRENREMKPETFMSLVSSL 81
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLK 126
LY KRF PY+ V+ GLD K V + D +G + G+ S + ++ L
Sbjct: 82 LYEKRFGPYFVEPVIAGLDKNAKPFVGSLDLIGCPMITEDFVVSGTASEQLYGMCES-LW 140
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P L A D +S+A +A +RD +G + V+ KD + + ++
Sbjct: 141 EPD---LEADDLFESISQA---------LLNAVDRDCVSGWGGIVYVIEKDKVTEKILKA 188
Query: 187 RKD 189
R D
Sbjct: 189 RMD 191
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQH---NKQMSCP 58
S GY + + K++ + D + ++G AD LQ + A IY ++
Sbjct: 31 SAGYYVAHKYVRKVLYVTDNIGITTAGSVAD---LQFIYEALKYIYHRNSITGEGPITVK 87
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
+ L+N L ++FPY ++GG+D++ + +Y D +G Y++ GSGS +
Sbjct: 88 GIATWLANVLSSSKYFPYLVQILIGGVDDQPR--LYNLDYLGDITEEEYTATGSGSPEAL 145
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L++ K +S EA +L K S+ +RD +TG + + + K+G
Sbjct: 146 GVLEDNYKPE-------------MSLDEAAELAKRAIFSSIKRDSFTGTGVIVTKITKNG 192
Query: 179 IHRE 182
H E
Sbjct: 193 -HEE 195
>gi|302660913|ref|XP_003022130.1| hypothetical protein TRV_03733 [Trichophyton verrucosum HKI 0517]
gi|291186061|gb|EFE41512.1| hypothetical protein TRV_03733 [Trichophyton verrucosum HKI 0517]
Length = 170
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 64 LSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
LS LY +R F P ++ ++ GLD+EGK + + D +G+ + G G+ L +P L
Sbjct: 34 LSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPIL 93
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGI 179
L P ++ + +++ +AVD +K C RD + D+ I V+ K+G+
Sbjct: 94 RR--------LFPEENGIDNITKEQAVDAMKQCMRVLFYRDARSSDRYSIAVVTKEGV 143
>gi|320582637|gb|EFW96854.1| proteasome component Pre3, putative [Ogataea parapolymorpha DL-1]
Length = 216
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ DK SG AD +A+ ++ +Y+ + + +
Sbjct: 40 TTGSYIANRVTDKLTQIHDKIWCCRSGSAADTQAVADIVKYHLEMYKANNGRPPTTKIAA 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L Y + + G D + G VY+ GS + Y+ GSGS I +
Sbjct: 100 SLFQELCYANKEMLTAGI-ICAGYDEKNGGQVYSIPLGGSLHKHEYAIAGSGSAFIYGYC 158
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
K QD +++ E V VKT + A D +G + +VVL KDGI R
Sbjct: 159 KKNFK---------QD----MTKDETVSFVKTSLSQAIRWDGSSGGVIRLVVLTKDGIER 205
>gi|225192934|dbj|BAH29709.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192940|dbj|BAH29705.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 90 STGSYIATCEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 149
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y D G+ S GSGS L
Sbjct: 150 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDDNGNRLSGRMFSTGSGSNYAYGVL 208
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
D+ K ++ EA +L + AT RD Y+G
Sbjct: 209 DSGYKE-------------DMTVEEAYELGRRGIVHATHRDSYSG 240
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
L+ ++ K+ ++ + +G DV L++ ++ +Y+ + ++M + L+S +
Sbjct: 36 LANNFEKVFQMGKTTFLGLTGLATDVITLREDFRLKNNLYKLREEREMEPKTLANLVSTS 95
Query: 68 LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLK 126
LY +RF PY+ ++ GL G+ + +D++G + + G+ S + ++ L
Sbjct: 96 LYERRFGPYFVSPIVAGLGKGGQPFICGFDSIGCIDFAKDFIVSGTASDQLYGTCES-LY 154
Query: 127 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMEL 186
P+ L +D +S+A +A +RD +G + V+ K+ + R +
Sbjct: 155 EPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAVVYVVTKEKVVRRVLRT 202
Query: 187 RKD 189
R+D
Sbjct: 203 RQD 205
>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 194
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 7 ILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSN 66
+++ D+ KI + D+ + +G DV+ + + L R +Y+ + +Q+ +++N
Sbjct: 23 MVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVAN 82
Query: 67 TLYYKRFFPYYSFNVLGGLDNEG-KGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQ 124
LY +RF PYY V+ GLD + K + + D +G E + G+ S + ++
Sbjct: 83 LLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCPMETEDFVVSGTCSEQMYGMCES- 141
Query: 125 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYM 184
L P + +D +S+A +A +RD +G + + V+ KD I +
Sbjct: 142 LWEPD---MEPEDLFETISQA---------MLNAVDRDAVSGMGVVVHVIEKDKITTRTL 189
Query: 185 ELRKD 189
+ R D
Sbjct: 190 KARMD 194
>gi|385773318|ref|YP_005645884.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
HVE10/4]
gi|385775950|ref|YP_005648518.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 211
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 22/184 (11%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCP 58
S G+ + ++ K++ + DK + ++G AD++ + +L IY + + +S
Sbjct: 38 SAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYNVLKN---IYHYNSITKYGPISIK 94
Query: 59 AMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
+ L+N L ++FPY ++GG D++ + ++ D +G Y + GSGS + M
Sbjct: 95 GIATRLANVLSATKYFPYIVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAM 152
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L+++ L EA DL K SA +RD +TG + + ++ G
Sbjct: 153 GVLEDEYNPKMTL-------------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG 199
Query: 179 IHRE 182
H E
Sbjct: 200 -HEE 202
>gi|121709886|ref|XP_001272559.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
gi|119400709|gb|EAW11133.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
Length = 260
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 5 YSILSRDYSKIIKL---ADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPAM 60
Y L+R +S + +L + V+ SG +D++ + +LL + + + H ++ +
Sbjct: 62 YGSLAR-FSNVKRLRVFGESAVIGFSGDVSDMQYIDRLLESIDIRENYSTHGNMLNAKNL 120
Query: 61 GQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIM 118
LS Y +R F P ++ ++ G D + + + + D +G+ + + G G+ L +
Sbjct: 121 HTYLSKVFYKRRSEFNPLWNQVLVAGFDGDEQPFLSSADLLGTTFSAPHLATGFGAHLAV 180
Query: 119 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
P L L P + + +++ EAVD ++ C RD + DK + V++KDG
Sbjct: 181 PILRR--------LFPEERPIEEITKEEAVDALRECLKVLWYRDARSLDKFSLAVISKDG 232
Query: 179 IHREYMELRKD 189
+ EL +D
Sbjct: 233 V-----ELHED 238
>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
Length = 206
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + DK + +G DV +L++L + +Y+ + + + + L+S++
Sbjct: 36 VSNNFEKIFSVGDKTFLGLTGLATDVISLKELFRFKTNLYKLREERNIEPSTLANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDN-EGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQL 125
LY +RF P++ ++ GL + + K + +D++G + + G+ S + ++ L
Sbjct: 96 LYERRFGPWFVSPIVAGLSSKDNKPFICGFDSIGCIDFSHDFIVSGTASDQLYGMCES-L 154
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
P+ L +D +S+A +A +RD +G + ++ KD + + ++
Sbjct: 155 YEPN---LEPEDLFETISQA---------LLNAVDRDALSGWGAVVYIVTKDKVIKRVLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 TRQD 206
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+S ++ KI + +G DV + +L + +Y+ + + +S L+S++
Sbjct: 36 VSNNFPKIFPFGSSTYLGLTGLATDVSTVSELFRYKVNMYRLREERDISPRTFANLVSSS 95
Query: 68 LYYKRFFPYYSFNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQL 125
LY KRF P++ V+ GLD++ GK + +D++G + + G+ S + +
Sbjct: 96 LYEKRFGPWFISPVVAGLDSKTGKPFICGFDSIGCIDFAKDFIVAGTASDQLFGTCEGLW 155
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYME 185
+ P L P +D +S+A SA +RD +G + ++ KD + + ++
Sbjct: 156 E---PDLGP-EDLFETMSQA---------LLSAVDRDALSGWGAHVYIIEKDKVTKRLLK 202
Query: 186 LRKD 189
R+D
Sbjct: 203 GRQD 206
>gi|342876162|gb|EGU77820.1| hypothetical protein FOXB_11684 [Fusarium oxysporum Fo5176]
Length = 261
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 24/187 (12%)
Query: 5 YSILSR--DYSKIIKLADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQM 55
Y L+R D ++ A+ V+ GF D+ +Q L RHLI Y ++
Sbjct: 62 YGSLARFTDVKRLRSFAESSVV---GFSGDISDMQYL--DRHLIDLSLDEAYTSPDAPRL 116
Query: 56 SCPAMGQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 113
+ + + L+ LY +R F P ++ ++ GLD++ K + D +GS + G G
Sbjct: 117 NAANLHRYLAKLLYRRRSKFDPLWNHLLVAGLDDDDKPFLAAADLLGSTYSAPSLATGFG 176
Query: 114 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 173
S L P + + P ++A L + EA+ ++K C RD + D + V
Sbjct: 177 SMLAQPIMRRHV--------PDEEAAQNLEKEEAIKIIKECMKVLYYRDARSLDSYSMAV 228
Query: 174 LNKDGIH 180
+ K+G+
Sbjct: 229 VTKEGVE 235
>gi|241742039|ref|XP_002414154.1| proteasome, subunit beta, putative [Ixodes scapularis]
gi|215508008|gb|EEC17462.1| proteasome, subunit beta, putative [Ixodes scapularis]
Length = 80
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 138 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHREYMELRKD 189
AV P E A+ ++K F SA ERDIYTGD + + +++KDG+H E LR+D
Sbjct: 30 AVPPTRE-RAISIIKDVFISAAERDIYTGDSVIVNIIDKDGVHEERFPLRRD 80
>gi|255711280|ref|XP_002551923.1| KLTH0B03102p [Lachancea thermotolerans]
gi|238933301|emb|CAR21485.1| KLTH0B03102p [Lachancea thermotolerans CBS 6340]
Length = 215
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ +K SG AD +A+ ++ +Y Q + + A
Sbjct: 40 TTGAYIANRVTDKLTRVHEKVWCCRSGSAADTQAVADIVQHYLELYTAQFGEPSTKTAAS 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+ TL Y+ + ++ G D + KG VY+ GS + Y+ GSGST I +
Sbjct: 100 --IFKTLCYENKDNLTAGIIVAGYDEKNKGEVYSIPLGGSVHKQKYAIAGSGSTFIYGYC 157
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
D K +S+ E V +K + A + D +G + +VVL KDG R
Sbjct: 158 DKNYKE-------------NMSKDETVSFMKNSLSQAIKWDGSSGGVIRMVVLTKDGAER 204
>gi|225192961|dbj|BAH29693.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225192990|dbj|BAH29623.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193005|dbj|BAH29633.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193020|dbj|BAH29643.1| proteasome subunit, beta type 8 [Oryzias latipes]
gi|225193071|dbj|BAH29677.1| proteasome subunit, beta type 8 [Oryzias latipes]
Length = 250
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
STG I + +Y+K+I++ + SG AD K ++LLA +Y+ ++N ++S A
Sbjct: 90 STGSYIATCEYNKVIEINPYLLGTMSGSAADCKYWERLLAKECRLYRLRNNHRISVAAAS 149
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LL N + R +++ G D EG G +Y D G+ S GSGS L
Sbjct: 150 KLLCNMMLGYRGMGLSVGSMICGWDKEGPG-IYYVDDNGNRLSGRMFSTGSGSNYAYGVL 208
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 166
D+ K ++ EA +L + AT RD Y+G
Sbjct: 209 DSGYKE-------------DMTVEEAYELGRRGIVHATHRDSYSG 240
>gi|254571735|ref|XP_002492977.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Komagataella pastoris
GS115]
gi|238032775|emb|CAY70798.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Komagataella pastoris
GS115]
gi|328353009|emb|CCA39407.1| 20S proteasome subunit beta 1 [Komagataella pastoris CBS 7435]
Length = 216
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
+TG I +R K+ ++ SG AD +A+ ++ +Y+ QH +
Sbjct: 40 TTGAYIANRVTDKLTQVHGTVWCCRSGSAADTQAVADIVKYHLELYEAQHGAPPTTKIAA 99
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
L L Y + + G D++ KG +Y+ GS + Y+ GSGST I +
Sbjct: 100 SLFQE-LCYNNKDALTAGIICAGYDDKEKGAIYSIPIGGSIHKQEYAIAGSGSTFIYGYC 158
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIHR 181
+ KS ++ E V+ +KT + A + D +G + +VVL G+ R
Sbjct: 159 NKNFKS-------------NMTRDETVEFIKTSLSQAIKWDGSSGGVIRMVVLTASGVER 205
>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485345|dbj|BAJ50999.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G+ I S+ KI+K+ D +A +G +D L ++ A + + +S
Sbjct: 22 SKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVRAERKLIALRRGYPLSVAESS 81
Query: 62 QLLSNTLY--YKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 119
+L+SN Y + + PYY+ ++ G+D+EG V++ D GS + S GSGS +
Sbjct: 82 KLISNLFYSGLRNYIPYYAELIVAGVDDEGP-HVFSSDMSGSMVAEEFVSSGSGSPVAYG 140
Query: 120 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
L++ L +P L EA A+ + +A +RD +G+ ++++ + G
Sbjct: 141 VLES-LYTPG----------LKLEEARAIAV--KAVEAAMQRDPGSGNGVDVLAIQVRG 186
>gi|443691508|gb|ELT93338.1| hypothetical protein CAPTEDRAFT_176004 [Capitella teleta]
Length = 199
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ D K+ K++D+ VMA SG D + +A +Y+ ++ ++S A
Sbjct: 28 MKHDTDKVYKMSDRVVMAVSGESGDTVQFAEYIAKNIQLYKMRNGYELSPHAAANFTRKN 87
Query: 68 L--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
+ + + PY ++ G D E ++ D + S V Y G GS L + LD
Sbjct: 88 MADFLRSRTPYMVNLLMAGFDEEKGPSLFFMDYLASLVEVPYGIHGYGSYLSLGILDKFY 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ L+ E ++L++ C +R I +I +++KDG+H
Sbjct: 148 RED-------------LNREEVLELLRKCVQEIEKRFIVNLGTFKIKIVDKDGVH 189
>gi|47522620|ref|NP_999100.1| proteasome subunit beta type-8 [Sus scrofa]
gi|4545092|gb|AAD22390.1|AF059493_1 proteasome subunit LMP7 [Sus scrofa]
Length = 260
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 2 STGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMG 61
S G I + +K+I++ + SG AD + ++LLA +Y ++ +++S A
Sbjct: 77 SAGSYIATLRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAAS 136
Query: 62 QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 121
+LLSN +Y R +++ G D +G G Y D G+ S GSG+T +
Sbjct: 137 KLLSNMMYQYRGMGLSMGSMICGWDKKGPGLYYV-DENGTRLSGNMFSTGSGNTYAYGVM 195
Query: 122 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDG 178
D+ + LS EA DL + AT RD Y+G + + + +DG
Sbjct: 196 DSGHR-------------YDLSIEEAYDLGRRAIVHATHRDSYSGGVVNMYHMKEDG 239
>gi|209730324|gb|ACI66031.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 8 LSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNT 67
+ +D K+ KL+DK ++ G D + + +Y+ ++ ++S A
Sbjct: 28 MKQDQDKMFKLSDKILLPCVGEAGDTVQFAEYIQKNIQLYKMRNGYELSPTAAANFTRKN 87
Query: 68 L--YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 125
L Y + PY+ +L G D +Y D + + + +++ G G+ L + LD
Sbjct: 88 LADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSALAKAPFAAHGHGAYLTLSILDRYY 147
Query: 126 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKDGIH 180
+ L+ EAVDL+K C R I + +++KDGIH
Sbjct: 148 RPD-------------LTRDEAVDLLKKCVEELNYRFILNLPSFSVRLIDKDGIH 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,836,132,064
Number of Sequences: 23463169
Number of extensions: 111918359
Number of successful extensions: 263305
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 1596
Number of HSP's that attempted gapping in prelim test: 259945
Number of HSP's gapped (non-prelim): 3080
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)