Query 029725
Match_columns 189
No_of_seqs 136 out of 847
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 03:39:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029725.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029725hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 2.6E-42 8.8E-47 273.1 4.3 105 23-127 2-112 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 1.6E-41 5.6E-46 258.7 5.3 104 23-126 1-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 4.5E-40 1.5E-44 253.3 5.7 102 25-126 2-108 (116)
4 2cbp_A Cucumber basic protein; 100.0 1.2E-38 4E-43 237.8 6.2 95 25-122 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 9.2E-35 3.2E-39 214.9 7.2 90 25-122 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.3 4.2E-12 1.4E-16 97.8 8.2 95 22-122 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.2 1.1E-11 3.8E-16 87.8 6.3 85 26-122 4-91 (91)
8 2cal_A Rusticyanin; iron respi 99.1 3.8E-11 1.3E-15 95.1 5.7 75 47-122 62-154 (154)
9 1pmy_A Pseudoazurin; electron 99.0 1.6E-09 5.5E-14 83.0 8.0 82 30-124 11-95 (123)
10 1plc_A Plastocyanin; electron 98.9 1.4E-09 4.8E-14 78.5 6.7 88 27-122 3-99 (99)
11 1paz_A Pseudoazurin precursor; 98.9 2.2E-09 7.7E-14 82.2 7.8 82 30-124 11-95 (123)
12 2gim_A Plastocyanin; beta shee 98.9 5.6E-09 1.9E-13 75.9 8.9 88 26-122 5-105 (106)
13 1iuz_A Plastocyanin; electron 98.9 2E-09 6.8E-14 78.0 6.1 89 26-122 3-98 (98)
14 1b3i_A PETE protein, protein ( 98.9 6E-09 2.1E-13 74.8 7.8 88 26-122 4-97 (97)
15 2aan_A Auracyanin A; cupredoxi 98.9 1.3E-08 4.3E-13 78.2 9.9 93 23-122 17-139 (139)
16 1kdj_A Plastocyanin; electron 98.9 4.9E-09 1.7E-13 75.9 7.0 89 26-122 2-102 (102)
17 3erx_A Pseudoazurin; copper pr 98.9 4.1E-09 1.4E-13 80.9 6.5 79 34-125 15-96 (123)
18 1byp_A Protein (plastocyanin); 98.8 1.2E-08 4.1E-13 73.4 7.9 89 26-122 2-99 (99)
19 3tu6_A Pseudoazurin (blue copp 98.8 8.3E-09 2.8E-13 79.6 6.9 84 29-125 11-98 (127)
20 2plt_A Plastocyanin; electron 98.7 2E-08 6.8E-13 72.0 6.8 90 25-122 2-98 (98)
21 3ef4_A Pseudoazurin, blue copp 98.7 3.2E-08 1.1E-12 76.2 7.9 82 29-123 10-95 (124)
22 1pcs_A Plastocyanin; electron 98.7 4.7E-08 1.6E-12 70.2 7.4 89 26-122 4-98 (98)
23 3c75_A Amicyanin; copper prote 98.3 1.4E-06 4.7E-11 66.9 7.0 69 47-122 61-132 (132)
24 2ux6_A Pseudoazurin; type-1 co 98.2 2.6E-06 9E-11 64.8 6.0 80 30-124 11-93 (122)
25 3cvb_A Plastocyanin; cupredoxi 98.2 4.8E-06 1.7E-10 59.8 6.9 87 26-122 4-104 (105)
26 4hci_A Cupredoxin 1; structura 98.2 7.5E-07 2.6E-11 64.5 2.5 68 47-122 29-100 (100)
27 2ov0_A Amicyanin; beta-sandwic 98.1 5.7E-06 2E-10 60.5 6.0 83 23-122 17-105 (105)
28 3ay2_A Lipid modified azurin p 98.0 1.3E-05 4.3E-10 64.7 7.5 91 25-122 43-166 (167)
29 1cuo_A Protein (azurin ISO-2); 98.0 1.9E-05 6.4E-10 60.8 8.1 90 26-122 4-128 (129)
30 1id2_A Amicyanin; beta barrel, 98.0 1.8E-05 6.1E-10 58.1 6.7 84 25-122 20-106 (106)
31 2iaa_C Azurin; quinoprotein, t 97.7 0.0003 1E-08 54.0 10.6 89 27-122 4-127 (128)
32 1nwp_A Azurin; electron transp 97.7 0.00014 4.8E-09 55.8 7.7 90 26-122 4-128 (128)
33 2ccw_A Azurin II, AZN-2; elect 97.6 0.00023 7.7E-09 54.7 8.6 90 26-122 4-128 (129)
34 1iko_P Ephrin-B2; greek KEY, g 97.6 1.1E-05 3.8E-10 65.9 1.1 77 51-127 27-144 (178)
35 2x11_B Ephrin-A5; receptor-sig 97.6 5.8E-05 2E-09 61.5 5.0 76 48-126 52-165 (177)
36 2cua_A Protein (CUA); CUA cent 97.1 0.0012 4E-08 51.0 6.9 65 47-122 61-134 (135)
37 1iby_A Nitrosocyanin; RED copp 97.1 0.0006 2.1E-08 49.8 4.9 66 47-122 39-111 (112)
38 3czu_B Ephrin-A1; ATP-binding, 97.1 0.001 3.5E-08 54.4 6.4 99 21-126 26-163 (182)
39 2vsm_B Ephrin-B2; developmenta 96.3 0.0022 7.4E-08 50.4 3.3 74 50-123 25-139 (140)
40 3d12_B Ephrin-B3; beta propell 96.3 0.0038 1.3E-07 49.0 4.5 74 49-122 23-140 (141)
41 1shx_A Ephrin-A5; ephrin signa 96.2 0.0051 1.7E-07 48.2 4.7 75 48-125 23-135 (138)
42 2wo3_B Ephrin-A2; transferase- 95.8 0.02 6.9E-07 45.7 6.4 75 49-126 33-146 (157)
43 3s8f_B Cytochrome C oxidase su 95.5 0.029 9.8E-07 45.0 6.5 64 47-122 94-167 (168)
44 2dv6_A Nitrite reductase; elec 94.8 0.018 6.3E-07 51.0 3.8 76 46-125 55-134 (447)
45 3sbq_A Nitrous-oxide reductase 94.7 0.035 1.2E-06 52.8 5.4 65 47-123 559-637 (638)
46 3fsa_A Azurin; copper, cupredo 94.7 0.27 9.2E-06 37.6 9.5 28 91-122 93-125 (125)
47 1fwx_A Nitrous oxide reductase 94.1 0.064 2.2E-06 50.7 5.8 70 47-124 514-593 (595)
48 3hei_B Ephrin-A1; EPH receptor 91.6 0.15 5.1E-06 39.5 3.7 73 49-122 23-131 (132)
49 1mzy_A Copper-containing nitri 84.4 0.83 2.8E-05 38.9 4.0 78 48-125 66-154 (333)
50 1oe1_A Dissimilatory copper-co 83.0 1 3.5E-05 38.3 4.0 76 47-125 66-154 (336)
51 3hb3_B Cytochrome C oxidase su 80.9 2.4 8.3E-05 36.6 5.6 67 49-123 192-264 (298)
52 1cyx_A CYOA; electron transpor 79.6 2.4 8.1E-05 34.9 4.9 67 48-122 43-115 (205)
53 1fft_B Ubiquinol oxidase; elec 79.2 3.9 0.00013 35.6 6.4 68 47-122 152-225 (315)
54 2gsm_B Cytochrome C oxidase su 78.6 3.1 0.0001 35.2 5.4 68 48-123 173-246 (262)
55 2bw4_A Copper-containing nitri 72.5 2.9 9.9E-05 35.5 3.7 75 48-125 73-160 (340)
56 1kbv_A ANIA, major outer membr 72.3 2.2 7.5E-05 36.4 2.9 74 47-124 71-157 (327)
57 2zoo_A Probable nitrite reduct 71.1 1.2 4E-05 39.4 0.9 77 47-125 61-148 (442)
58 3gdc_A Multicopper oxidase; be 65.1 5.7 0.00019 33.1 4.0 79 47-125 67-156 (288)
59 3cg8_A Laccase; oxidoreductase 64.3 9.5 0.00033 32.8 5.3 32 96-127 279-310 (343)
60 1v54_B Cytochrome C oxidase po 62.0 5.5 0.00019 32.9 3.2 31 91-123 182-215 (227)
61 1oe1_A Dissimilatory copper-co 60.2 7.9 0.00027 32.7 4.0 35 91-125 285-320 (336)
62 2zwn_A Two-domain type laccase 55.5 9.7 0.00033 32.5 3.8 78 47-124 36-127 (339)
63 3l6w_A Hemocyanin 1; cupredoxi 53.6 11 0.00037 34.9 3.9 72 49-122 414-491 (491)
64 1mzy_A Copper-containing nitri 51.1 7.5 0.00026 32.8 2.4 34 91-124 285-319 (333)
65 1aoz_A Ascorbate oxidase; oxid 50.2 18 0.00061 33.0 4.8 79 47-125 35-125 (552)
66 1yel_A AT1G16640; CESG, protei 47.1 10 0.00034 26.9 2.2 19 45-63 73-91 (104)
67 3sqr_A Laccase; multicopper ox 46.9 18 0.00062 33.6 4.4 34 91-124 155-188 (580)
68 3gdc_A Multicopper oxidase; be 46.8 7.4 0.00025 32.4 1.6 33 91-123 256-288 (288)
69 3g5w_A Multicopper oxidase typ 44.8 10 0.00036 32.1 2.3 78 49-126 37-128 (318)
70 1sdd_A Coagulation factor V; c 43.0 2.9 9.8E-05 35.3 -1.6 76 47-123 216-300 (306)
71 2q9o_A Laccase-1; multicopper 40.2 21 0.00073 32.6 3.7 78 47-124 68-158 (559)
72 1zpu_A Iron transport multicop 39.3 29 0.00099 31.6 4.4 79 47-125 35-126 (534)
73 2j5w_A Ceruloplasmin, ferroxid 38.8 14 0.00047 36.7 2.4 75 47-125 633-719 (1065)
74 3iuw_A Activating signal coint 38.8 12 0.0004 26.6 1.3 15 48-62 36-51 (83)
75 3t6v_A Laccase; beta barrel, o 37.1 30 0.001 31.3 4.1 79 47-125 36-131 (495)
76 1kbv_A ANIA, major outer membr 35.9 21 0.00071 30.2 2.7 34 91-124 274-308 (327)
77 3pxl_A Laccase; 4-copper prote 35.5 33 0.0011 31.1 4.1 79 47-125 35-130 (499)
78 3tas_A Small laccase, multi-co 35.3 58 0.002 27.2 5.5 77 49-126 45-149 (313)
79 2uxt_A Protein SUFI, SUFI; oxi 33.2 28 0.00095 30.9 3.2 74 48-125 52-140 (451)
80 4i1k_A B3 domain-containing tr 31.9 26 0.00087 26.7 2.4 25 45-69 112-137 (146)
81 2qcp_X Cation efflux system pr 31.8 15 0.00051 25.3 1.0 20 44-63 48-67 (80)
82 2vb2_X Copper protein, cation 31.7 15 0.00051 25.9 1.0 22 42-63 54-75 (88)
83 1sdd_A Coagulation factor V; c 31.0 44 0.0015 27.8 4.0 77 48-125 62-168 (306)
84 2bw4_A Copper-containing nitri 28.6 52 0.0018 27.6 4.0 35 91-125 291-326 (340)
85 2r7e_B Coagulation factor VIII 27.7 25 0.00087 33.7 2.1 76 48-125 201-299 (770)
86 2zoo_A Probable nitrite reduct 27.4 39 0.0013 29.4 3.1 35 91-125 264-299 (442)
87 1xne_A Hypothetical protein PF 27.0 13 0.00043 27.7 -0.1 12 48-59 33-44 (113)
88 2hzs_I RNA polymerase II media 26.7 0.82 2.8E-05 25.6 -5.0 17 47-63 4-20 (27)
89 1sdd_B Coagulation factor V; c 25.5 34 0.0011 31.7 2.4 33 91-123 295-327 (647)
90 4dny_A Metalloprotease STCE; m 24.7 18 0.0006 27.7 0.3 12 49-60 101-112 (126)
91 2xu9_A Laccase; oxidoreductase 24.4 1E+02 0.0036 26.9 5.3 75 49-123 50-135 (439)
92 3t9w_A Small laccase, multi-co 24.2 1.5E+02 0.0053 24.5 6.2 77 49-126 61-165 (299)
93 2l55_A SILB,silver efflux prot 24.1 69 0.0023 22.1 3.3 22 42-63 40-61 (82)
94 2z0t_A Putative uncharacterize 22.8 24 0.00083 26.0 0.8 11 48-58 32-42 (109)
95 3kw8_A Laccase, putative coppe 22.8 62 0.0021 26.5 3.3 78 48-125 38-142 (276)
96 1v10_A Laccase; multicopper bl 22.6 56 0.0019 29.5 3.3 35 91-125 116-151 (521)
97 3kw8_A Laccase, putative coppe 21.6 42 0.0014 27.6 2.0 35 92-126 231-268 (276)
98 2qlv_B Protein SIP2, protein S 20.7 1.6E+02 0.0053 24.4 5.4 45 56-103 6-55 (252)
99 1z0n_A 5'-AMP-activated protei 20.6 1.6E+02 0.0054 20.4 4.7 41 56-101 13-56 (96)
100 1hfu_A Laccase 1; oxidoreducta 20.2 58 0.002 29.2 2.9 35 91-125 95-130 (503)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=2.6e-42 Score=273.09 Aligned_cols=105 Identities=37% Similarity=0.728 Sum_probs=99.0
Q ss_pred ccEEEEecCCCCCCCC---CCCcccCCCCeEEeCCEeEEEECCC-CeEEEE-cCCCCCCCCCCCCccccCCCceEEEe-c
Q 029725 23 FATVYNVGESSGWTMG---TDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEV-SGSDYNSCTVGNAITSDSSGATTITL-K 96 (189)
Q Consensus 23 ~a~~~~VG~~~GW~~~---~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V-~~~~Y~~C~~s~pi~~~s~G~~~v~L-~ 96 (189)
+|++|+|||+.||+++ .||++|+++|+|++||+|+|+|..+ |+|+|| ++++|+.|+.++++..+++|+++|+| +
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~ 81 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLD 81 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECC
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEecc
Confidence 5789999999999998 6899999999999999999999987 999999 99999999999999999999999999 9
Q ss_pred CCceEEEEcCCCCCCCCCCeEEEEecCCCCC
Q 029725 97 TAGTHYFICGVPGHCGSGMKLAVTVGSGSPT 127 (189)
Q Consensus 97 ~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~ 127 (189)
++|++||||++++||++||||+|+|.+..+.
T Consensus 82 ~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~ 112 (138)
T 1jer_A 82 ELGMHYFVCTVGTHCSNGQKLSINVVAANAT 112 (138)
T ss_dssp SSEEEEEECCSTTTGGGTCEEEEEEECCC--
T ss_pred CCcCEEEEcCCCCccccCCEEEEEEcCCCCC
Confidence 9999999999999999999999999976654
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=1.6e-41 Score=258.67 Aligned_cols=104 Identities=47% Similarity=0.901 Sum_probs=97.6
Q ss_pred ccEEEEecCCCCCCCC--CCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCc
Q 029725 23 FATVYNVGESSGWTMG--TDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAG 99 (189)
Q Consensus 23 ~a~~~~VG~~~GW~~~--~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G 99 (189)
+|++|+|||+.||+++ .||++||++|+|++||+|+|+|.++ |+|+||++++|+.|+.++|+..+++|+++|+|+++|
T Consensus 1 ~a~~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 80 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPG 80 (109)
T ss_dssp CCCEEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSSE
T ss_pred CCcEEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCCc
Confidence 3689999999999998 7999999999999999999999998 999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCCCCCeEEEEecCCCC
Q 029725 100 THYFICGVPGHCGSGMKLAVTVGSGSP 126 (189)
Q Consensus 100 ~~YFiC~v~~HC~~GmKl~I~V~~~~~ 126 (189)
++||||++++||++||||+|+|.+..+
T Consensus 81 ~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 81 TFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEECCCCCcccCCCEEEEEEcCCCC
Confidence 999999999999999999999986554
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=4.5e-40 Score=253.26 Aligned_cols=102 Identities=38% Similarity=0.785 Sum_probs=94.6
Q ss_pred EEEEecCCCCCCCC---CCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCce
Q 029725 25 TVYNVGESSGWTMG---TDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGT 100 (189)
Q Consensus 25 ~~~~VG~~~GW~~~---~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~ 100 (189)
++|+|||+.||+++ .||++|+++++|++||+|+|+|.++ |+|+||++++|+.|+.++++..+++|+++|+|+++|+
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 81 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGP 81 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCEE
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCCC
Confidence 57999999999985 5799999999999999999999987 9999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCeEEE-EecCCCC
Q 029725 101 HYFICGVPGHCGSGMKLAV-TVGSGSP 126 (189)
Q Consensus 101 ~YFiC~v~~HC~~GmKl~I-~V~~~~~ 126 (189)
+||||++++||++||||+| +|.+..+
T Consensus 82 ~yFic~~~~HC~~Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 82 QYYICTVGDHCRVGQKLSINVVGAGGA 108 (116)
T ss_dssp EEEECCSTTTTTTTCEEEEEEECC---
T ss_pred EEEECCCCCccccCCEEEEEEECCCCC
Confidence 9999999999999999999 7876543
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.2e-38 Score=237.76 Aligned_cols=95 Identities=43% Similarity=0.852 Sum_probs=91.1
Q ss_pred EEEEecCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEE
Q 029725 25 TVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYF 103 (189)
Q Consensus 25 ~~~~VG~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YF 103 (189)
++|+|||+.||++ +|++|+++++|++||+|+|+|.++ |+|+||++++|+.|+.++|+..+++|++.|+| ++|++||
T Consensus 1 ~~~~VG~~~GW~~--~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~~yF 77 (96)
T 2cbp_A 1 AVYVVGGSGGWTF--NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQSYF 77 (96)
T ss_dssp CEEETTGGGCSCS--SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEEEEE
T ss_pred CEEEECCcCCCcc--ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCCEEE
Confidence 4799999999997 699999999999999999999987 99999999999999999999999999999999 8999999
Q ss_pred EcCCCCCCCCCCeEEEEec
Q 029725 104 ICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 104 iC~v~~HC~~GmKl~I~V~ 122 (189)
||++++||++||||+|+|+
T Consensus 78 ic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 78 ICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp ECCSTTTGGGTCEEEEEEC
T ss_pred EcCCCCccccCCEEEEEEC
Confidence 9999999999999999985
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=9.2e-35 Score=214.87 Aligned_cols=90 Identities=46% Similarity=0.915 Sum_probs=85.5
Q ss_pred EEEEecCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEE
Q 029725 25 TVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYF 103 (189)
Q Consensus 25 ~~~~VG~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YF 103 (189)
++|+| ||+++ ++|+++++|++||+|+|+|.++ |+|+||++++|+.|+.++++..+++|++.|+|+ +|++||
T Consensus 1 ~~y~V----gW~~~---~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~~yF 72 (91)
T 1f56_A 1 AVYNI----GWSFN---VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQNYF 72 (91)
T ss_dssp CEEEE----ECSSS---CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEEEEE
T ss_pred CEEEE----eCCCC---CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCCeEE
Confidence 36889 79988 8999999999999999999987 999999999999999999999999999999996 899999
Q ss_pred EcCCCCCCCCCCeEEEEec
Q 029725 104 ICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 104 iC~v~~HC~~GmKl~I~V~ 122 (189)
||++++||++||||+|+|.
T Consensus 73 ic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 73 ICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp ECCSTTTTTTTCEEEEEEC
T ss_pred EcCCCCccccCCEEEEEEC
Confidence 9999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.32 E-value=4.2e-12 Score=97.77 Aligned_cols=95 Identities=23% Similarity=0.364 Sum_probs=66.0
Q ss_pred cccEEEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECC-----C-CeEEEEcCC-CCCC--------------C--
Q 029725 22 SFATVYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGS-----G-HTVDEVSGS-DYNS--------------C-- 77 (189)
Q Consensus 22 a~a~~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~-----~-hsV~~V~~~-~Y~~--------------C-- 77 (189)
+..+++.|+-. .+|.+.++ ..+++.||+++|.|.+ . |+++..+.. +++. .
T Consensus 14 ~~~~~v~V~~~~~~~~F~P~------~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQT------SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP 87 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSCS------EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC
T ss_pred CCCEEEEEEEeCCCceEeCC------eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc
Confidence 34567777754 35888764 6789999999988865 3 999887422 1110 1
Q ss_pred -CCCC------CccccCCCceEEEecCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 78 -TVGN------AITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 78 -~~s~------pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+..+ .+....++...|+++++|.|||+|++++||..|||..|+|.
T Consensus 88 ~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 88 PDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 0001 11222234467888899999999999999999999999986
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.24 E-value=1.1e-11 Score=87.82 Aligned_cols=85 Identities=16% Similarity=0.268 Sum_probs=61.2
Q ss_pred EEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECC-C-CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEE
Q 029725 26 VYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGS-G-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHY 102 (189)
Q Consensus 26 ~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~-~-hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~Y 102 (189)
+..+|++ .+|.+.|+ ..++++||+|+|++.. . |+|.......+. ........+....++++++|.|+
T Consensus 4 ~v~~~~~~~~~~f~P~------~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~----~~~~~~~~g~~~~~~f~~~G~y~ 73 (91)
T 1bxv_A 4 AIKMGADNGMLAFEPS------TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS----HKDLAFSPGETFEATFSEPGTYT 73 (91)
T ss_dssp EEEESCTTSCSSEESS------EEEECTTCEEEEEECSSCCEEEEETTCGGGC----EEEEECSTTCEEEEECCSCEEEE
T ss_pred EEEEecCCCccEEeCC------EEEECCCCEEEEEECCCCCcEEEEeCCCccC----cccceeCCCCEEEEEeCCCEEEE
Confidence 3456664 45777664 5789999999999986 3 999876533221 01111122335788999999999
Q ss_pred EEcCCCCCCCCCCeEEEEec
Q 029725 103 FICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 103 FiC~v~~HC~~GmKl~I~V~ 122 (189)
|+|. .||..||+..|+|.
T Consensus 74 ~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 74 YYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EECT--TTGGGTCEEEEEEC
T ss_pred EEeC--CCccCCCEEEEEEC
Confidence 9999 89999999999984
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.14 E-value=3.8e-11 Score=95.14 Aligned_cols=75 Identities=29% Similarity=0.500 Sum_probs=57.5
Q ss_pred CCeEEeCCEeEEEECC---C--CeEEEEc-CCCCCCCCCCCCcccc-------CCC---ce--EEEecCCceEEEEcCCC
Q 029725 47 GKTFAVGDSLVFNYGS---G--HTVDEVS-GSDYNSCTVGNAITSD-------SSG---AT--TITLKTAGTHYFICGVP 108 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~---~--hsV~~V~-~~~Y~~C~~s~pi~~~-------s~G---~~--~v~L~~~G~~YFiC~v~ 108 (189)
..++++||+|+|++.+ . |++..++ ...|+.|.....+... ..| .. +|++ ++|+|||+|+++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 4588999999999964 2 9999984 4578888765443211 122 33 5678 999999999999
Q ss_pred CCCCCCCeEEEEec
Q 029725 109 GHCGSGMKLAVTVG 122 (189)
Q Consensus 109 ~HC~~GmKl~I~V~ 122 (189)
+||+.|||..|.|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999884
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.97 E-value=1.6e-09 Score=82.96 Aligned_cols=82 Identities=20% Similarity=0.282 Sum_probs=59.2
Q ss_pred cCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCC--CccccCCCceEEEecCCceEEEEcC
Q 029725 30 GESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGN--AITSDSSGATTITLKTAGTHYFICG 106 (189)
Q Consensus 30 G~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~--pi~~~s~G~~~v~L~~~G~~YFiC~ 106 (189)
|++.++.+.|+ ..++++||+|+|.+.+. |+|+... .|.... ......+....++++++|.|+|+|.
T Consensus 11 g~~g~~~F~P~------~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~ 79 (123)
T 1pmy_A 11 GPGGMMVFDPA------LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA 79 (123)
T ss_dssp ETTEEEEEESS------EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS
T ss_pred cCCCCceEeCC------EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC
Confidence 54445666654 57899999999999887 9998752 122211 1111122346899999999999998
Q ss_pred CCCCCCCCCeEEEEecCC
Q 029725 107 VPGHCGSGMKLAVTVGSG 124 (189)
Q Consensus 107 v~~HC~~GmKl~I~V~~~ 124 (189)
.||..||+..|+|...
T Consensus 80 --~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 80 --PHYMMGMVALVVVGDK 95 (123)
T ss_dssp --TTTTTTCEEEEEESSC
T ss_pred --CccccCCEEEEEEcCC
Confidence 4999999999999854
No 10
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.95 E-value=1.4e-09 Score=78.53 Aligned_cols=88 Identities=20% Similarity=0.351 Sum_probs=60.4
Q ss_pred EEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCC---CCCCCCC---CCCccccCCCceEEEecC
Q 029725 27 YNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGS---DYNSCTV---GNAITSDSSGATTITLKT 97 (189)
Q Consensus 27 ~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~---~Y~~C~~---s~pi~~~s~G~~~v~L~~ 97 (189)
..+|++ .++.+.|+ ..++++||+|+|++... |+|...+.. +.+.+.. .+.+....+....+++++
T Consensus 3 v~m~~~~~~~~F~P~------~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~~ 76 (99)
T 1plc_A 3 VLLGADDGSLAFVPS------EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSN 76 (99)
T ss_dssp EEESCTTCCSCEESS------EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECCS
T ss_pred EEEecCCCcceEeCC------EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEECC
Confidence 456653 45666553 57899999999998875 999876432 1222211 011111223346889999
Q ss_pred CceEEEEcCCCCCCCCCCeEEEEec
Q 029725 98 AGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 98 ~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+|.|+|+|. .||+.||+..|+|.
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 89999999999984
No 11
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.94 E-value=2.2e-09 Score=82.15 Aligned_cols=82 Identities=18% Similarity=0.270 Sum_probs=58.9
Q ss_pred cCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCC--CccccCCCceEEEecCCceEEEEcC
Q 029725 30 GESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGN--AITSDSSGATTITLKTAGTHYFICG 106 (189)
Q Consensus 30 G~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~--pi~~~s~G~~~v~L~~~G~~YFiC~ 106 (189)
|++.++.+.|+ ..++++||+|+|.+.+. |+|.... .|...+ ......+....++++++|.|+|+|.
T Consensus 11 g~~g~~~F~P~------~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~ 79 (123)
T 1paz_A 11 GAEGAMVFEPA------YIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT 79 (123)
T ss_dssp ETTEEEEEESS------EEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT
T ss_pred cCCCCceEeCC------EEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC
Confidence 55445666554 57899999999999887 9998641 122111 1111122346899999999999998
Q ss_pred CCCCCCCCCeEEEEecCC
Q 029725 107 VPGHCGSGMKLAVTVGSG 124 (189)
Q Consensus 107 v~~HC~~GmKl~I~V~~~ 124 (189)
.||..||+..|+|...
T Consensus 80 --~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 80 --PHYAMGMIALIAVGDS 95 (123)
T ss_dssp --TTGGGTCEEEEEESSS
T ss_pred --CcccCCCEEEEEEcCC
Confidence 5999999999999853
No 12
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.91 E-value=5.6e-09 Score=75.92 Aligned_cols=88 Identities=22% Similarity=0.260 Sum_probs=60.3
Q ss_pred EEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCCCC-----C--CCCCCCccccCCCceEEEe
Q 029725 26 VYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSDYN-----S--CTVGNAITSDSSGATTITL 95 (189)
Q Consensus 26 ~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~Y~-----~--C~~s~pi~~~s~G~~~v~L 95 (189)
+..+|.+ .++.+.|+ ..++++||+|+|.+... |+|........+ . +.. +......+....+++
T Consensus 5 ~V~~~~~~~~~~F~P~------~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~-~~~~~~pG~~~~~~f 77 (106)
T 2gim_A 5 TVKLGSDKGLLVFEPA------KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSH-KQLLMSPGQSTSTTF 77 (106)
T ss_dssp EEEESCTTCCSSEESS------EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCB-CSCCCSTTCEEEEEC
T ss_pred EEEEEecCCcceEcCC------EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccc-cceeeCCCCEEEEEE
Confidence 4556653 56777664 56899999999998763 999865322100 0 000 111112233467888
Q ss_pred ---cCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 96 ---KTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 96 ---~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+++|.|+|+|. .||+.||+..|+|.
T Consensus 78 ~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 78 PADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999986
No 13
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.90 E-value=2e-09 Score=77.98 Aligned_cols=89 Identities=21% Similarity=0.353 Sum_probs=60.8
Q ss_pred EEEecC-CCCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcC---CCCCCCCCCCCccccCCC-ceEEEecCC
Q 029725 26 VYNVGE-SSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSG---SDYNSCTVGNAITSDSSG-ATTITLKTA 98 (189)
Q Consensus 26 ~~~VG~-~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~---~~Y~~C~~s~pi~~~s~G-~~~v~L~~~ 98 (189)
+..+|+ +.++.+.|+ ..++++||+|+|.+... |+|...+. ++++.+...........| ...++++++
T Consensus 3 ~V~m~~~~~~~~F~P~------~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~~ 76 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVPS------KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLSTP 76 (98)
T ss_dssp EEEESCTTSCCSEESS------EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCSC
T ss_pred EEEEecCCCCcEEeCC------EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCCC
Confidence 445554 446777664 67899999999998874 99987542 123322211110112233 458899999
Q ss_pred ceEEEEcCCCCCCCCCCeEEEEec
Q 029725 99 GTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 99 G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
|.|+|+|.. ||+.||+..|.|.
T Consensus 77 G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 77 GVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp EEEEEECTT--TGGGTCEEEEEEC
T ss_pred EEEEEEchh--hccCCCEEEEEEC
Confidence 999999995 9999999999884
No 14
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.88 E-value=6e-09 Score=74.75 Aligned_cols=88 Identities=22% Similarity=0.243 Sum_probs=60.4
Q ss_pred EEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCC---CCCCCCCCCccccCCCceEEEecCCc
Q 029725 26 VYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSD---YNSCTVGNAITSDSSGATTITLKTAG 99 (189)
Q Consensus 26 ~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~---Y~~C~~s~pi~~~s~G~~~v~L~~~G 99 (189)
+..+|++ .++.+.|+ ..+++.||+|+|.+... |++...+... .+.+.... .....+....++++++|
T Consensus 4 ~V~~~~~~~~~~F~P~------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~tf~~~G 76 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEPK------ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK-LAIAPGSFYSVTLGTPG 76 (97)
T ss_dssp EEEEEETTTEEEEESS------EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC-CCCSCSCCEEEECCSCS
T ss_pred EEEEeccCCccEEeCC------EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc-eecCCCCEEEEEeCCCe
Confidence 3455543 45666554 56899999999998874 9998764321 01111111 11223345688999999
Q ss_pred eEEEEcCCCCCCCCCCeEEEEec
Q 029725 100 THYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 100 ~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
.|+|+|. .||+.||+..|.|.
T Consensus 77 ~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 77 TYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEEEECS--STTTTTCEEEEEEC
T ss_pred EEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999 89999999999884
No 15
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.87 E-value=1.3e-08 Score=78.19 Aligned_cols=93 Identities=23% Similarity=0.360 Sum_probs=63.2
Q ss_pred ccEEEEecC-CCCCCCCCCCcccCCCCeEEeCCEeEEEECC-----CCeEEEEcCC------------------CCCCCC
Q 029725 23 FATVYNVGE-SSGWTMGTDYSTWTSGKTFAVGDSLVFNYGS-----GHTVDEVSGS------------------DYNSCT 78 (189)
Q Consensus 23 ~a~~~~VG~-~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~-----~hsV~~V~~~------------------~Y~~C~ 78 (189)
...++.||. ..++.+.++ ..+++.||+++|.|.+ .|++...... +|..|.
T Consensus 17 ~~~~V~v~~~~~~~~F~p~------~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~ 90 (139)
T 2aan_A 17 GPVTIEIGSKGEELAFDKT------ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPAD 90 (139)
T ss_dssp CCEEEEEEBCTTSSSBSCS------EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSC
T ss_pred cCEEEEEEecCCccEEcCC------eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcc
Confidence 344566743 235776654 5789999999988754 4888887532 566665
Q ss_pred CCCCcc---ccCCC-ceE--EEecCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 79 VGNAIT---SDSSG-ATT--ITLKTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 79 ~s~pi~---~~s~G-~~~--v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
..+.+. ....| ... |+++++|.|+|+|.+..||. ||+..|.|.
T Consensus 91 ~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 91 KSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred cccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 333211 12233 334 44558999999999999999 999999884
No 16
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.86 E-value=4.9e-09 Score=75.85 Aligned_cols=89 Identities=22% Similarity=0.275 Sum_probs=60.7
Q ss_pred EEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCCCC----CCCCC-----CCccccCCCceEE
Q 029725 26 VYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSDYN----SCTVG-----NAITSDSSGATTI 93 (189)
Q Consensus 26 ~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~Y~----~C~~s-----~pi~~~s~G~~~v 93 (189)
+..+|++ .++.+.|+ ..++++||+|+|.+... |++.....+.++ .|... +......+....+
T Consensus 2 ~V~~g~~~~~~~F~P~------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~ 75 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYPD------SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKA 75 (102)
T ss_dssp EEEESCTTCCCCEESS------EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEE
T ss_pred EEEEecCCCccEEeCC------EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEE
Confidence 3456763 45666554 56899999999998774 999876433321 11100 1111122334678
Q ss_pred EecCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 94 TLKTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 94 ~L~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+++++|.|+|+|. .||..||+..|.|.
T Consensus 76 tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 76 KVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 8999999999999 99999999999884
No 17
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.85 E-value=4.1e-09 Score=80.91 Aligned_cols=79 Identities=22% Similarity=0.243 Sum_probs=58.6
Q ss_pred CCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCC--CccccCCCceEEEecCCceEEEEcCCCCC
Q 029725 34 GWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGN--AITSDSSGATTITLKTAGTHYFICGVPGH 110 (189)
Q Consensus 34 GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~--pi~~~s~G~~~v~L~~~G~~YFiC~v~~H 110 (189)
+..+.|+ ..++++||+|+|.+.+. |+|...+. |...+ ......+....++++++|.|+|+|. .|
T Consensus 15 ~~~F~P~------~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H 81 (123)
T 3erx_A 15 AMVFEPA------FVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PH 81 (123)
T ss_dssp EEEEESS------EEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GG
T ss_pred cEeEeCC------EEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CC
Confidence 3666654 67899999999999887 99987432 22221 1111223457899999999999999 79
Q ss_pred CCCCCeEEEEecCCC
Q 029725 111 CGSGMKLAVTVGSGS 125 (189)
Q Consensus 111 C~~GmKl~I~V~~~~ 125 (189)
|..||+-.|+|...+
T Consensus 82 ~~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 82 FGMGMVGLVQVGDAP 96 (123)
T ss_dssp TTTTCEEEEEESSSC
T ss_pred CcCCcEEEEEECCCC
Confidence 999999999998633
No 18
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.82 E-value=1.2e-08 Score=73.40 Aligned_cols=89 Identities=22% Similarity=0.349 Sum_probs=60.4
Q ss_pred EEEecC-CCCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCC---CCCCCCC---CCCccccCCCceEEEec
Q 029725 26 VYNVGE-SSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGS---DYNSCTV---GNAITSDSSGATTITLK 96 (189)
Q Consensus 26 ~~~VG~-~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~---~Y~~C~~---s~pi~~~s~G~~~v~L~ 96 (189)
+..+|+ +.++.+.|+ ..++++||+|+|++... |+|...+.. .++.+.. .+.+....+....++++
T Consensus 2 ~V~~~~~~~~~~F~P~------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~ 75 (99)
T 1byp_A 2 EVLLGSSDGGLAFVPS------DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT 75 (99)
T ss_dssp EEEESCTTSCCSEESS------EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC
T ss_pred EEEEecCCCcceEeCC------EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeC
Confidence 345664 445666654 56899999999998874 999876421 2222211 01111122334688999
Q ss_pred CCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 97 TAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 97 ~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
++|.|.|+|. .||+.||+..|+|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999 89999999999884
No 19
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.80 E-value=8.3e-09 Score=79.65 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=61.1
Q ss_pred ecCCC-CCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCC--CccccCCCceEEEecCCceEEEE
Q 029725 29 VGESS-GWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGN--AITSDSSGATTITLKTAGTHYFI 104 (189)
Q Consensus 29 VG~~~-GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~--pi~~~s~G~~~v~L~~~G~~YFi 104 (189)
+|.+. +..+.|+ ..++++||+|+|.+.+. |+|...+. +.... ....-.+....++++++|.|+|+
T Consensus 11 ~g~~g~~~~F~P~------~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~ 79 (127)
T 3tu6_A 11 KAADGRVMAFEPA------VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQ 79 (127)
T ss_dssp ECTTSCEEEEESS------EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEE
T ss_pred cCCCCcccEEeCC------EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEE
Confidence 46544 4666664 67899999999999887 99987532 11111 11111233578999999999999
Q ss_pred cCCCCCCCCCCeEEEEecCCC
Q 029725 105 CGVPGHCGSGMKLAVTVGSGS 125 (189)
Q Consensus 105 C~v~~HC~~GmKl~I~V~~~~ 125 (189)
|. .||..||+..|.|...+
T Consensus 80 C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 80 CA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CT--TTGGGTCEEEEEESSCT
T ss_pred eC--CCCcCCcEEEEEECcCC
Confidence 99 69999999999998754
No 20
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.74 E-value=2e-08 Score=71.98 Aligned_cols=90 Identities=19% Similarity=0.297 Sum_probs=60.8
Q ss_pred EEEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcC---CCCCCCCCCC-CccccCCCceEEEecC
Q 029725 25 TVYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSG---SDYNSCTVGN-AITSDSSGATTITLKT 97 (189)
Q Consensus 25 ~~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~---~~Y~~C~~s~-pi~~~s~G~~~v~L~~ 97 (189)
.+..+|++ .++.+.|+ ..++++||+|+|.+... |++...+. ++++.+.... ......+....+++++
T Consensus 2 ~~V~m~~~~~~~~F~P~------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~ 75 (98)
T 2plt_A 2 ATVKLGADSGALEFVPK------TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTA 75 (98)
T ss_dssp EEEEESCTTCCSSEESS------EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCS
T ss_pred EEEEEecCCCCceEeCC------EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCC
Confidence 34566643 45776654 56899999999998874 99987542 1222221110 0111223345889999
Q ss_pred CceEEEEcCCCCCCCCCCeEEEEec
Q 029725 98 AGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 98 ~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+|+|+|.|. .||+.||+..|.|.
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999884
No 21
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.72 E-value=3.2e-08 Score=76.21 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=60.7
Q ss_pred ecCCC-CCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCCC--ccccCCCceEEEecCCceEEEE
Q 029725 29 VGESS-GWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNA--ITSDSSGATTITLKTAGTHYFI 104 (189)
Q Consensus 29 VG~~~-GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~p--i~~~s~G~~~v~L~~~G~~YFi 104 (189)
+|++. ++.+.|+ ..++++||+|+|.+.+. |+|...+. +..... .....+....++++++|.|.|+
T Consensus 10 ~g~~G~~~~F~P~------~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~ 78 (124)
T 3ef4_A 10 KDDAGNTMVFQPG------FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLK 78 (124)
T ss_dssp ECTTSCEEEEESS------EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEE
T ss_pred cCCCCceeEEeCC------EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEE
Confidence 44443 3888774 67899999999999877 99987532 222211 1112233578999999999999
Q ss_pred cCCCCCCCCCCeEEEEecC
Q 029725 105 CGVPGHCGSGMKLAVTVGS 123 (189)
Q Consensus 105 C~v~~HC~~GmKl~I~V~~ 123 (189)
|. .||..||+-.|+|..
T Consensus 79 C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 79 CA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CT--TTGGGTCEEEEEESS
T ss_pred cC--CCCcCCCEEEEEECC
Confidence 97 799999999999986
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.69 E-value=4.7e-08 Score=70.16 Aligned_cols=89 Identities=17% Similarity=0.233 Sum_probs=59.0
Q ss_pred EEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCC--CCCCCCC-CCccccCCCceEEEecCCc
Q 029725 26 VYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSD--YNSCTVG-NAITSDSSGATTITLKTAG 99 (189)
Q Consensus 26 ~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~--Y~~C~~s-~pi~~~s~G~~~v~L~~~G 99 (189)
+..+|.+ .++.+.|+ ..++++||+++|.+... |++...+... .+..... +......+....++++++|
T Consensus 4 ~V~~~~~~~~~~F~P~------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~G 77 (98)
T 1pcs_A 4 TVKMGSDSGALVFEPS------TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEPG 77 (98)
T ss_dssp EEEESCTTSCSSEESS------EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSCE
T ss_pred EEEEecCCCccEEeCC------EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCCe
Confidence 4456653 46776654 56899999999998774 9988753210 0000000 0111122334678899999
Q ss_pred eEEEEcCCCCCCCCCCeEEEEec
Q 029725 100 THYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 100 ~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+|+|+|. .||..||+..|.|.
T Consensus 78 ~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 78 TYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEEcC--CccccCCeEEEEEC
Confidence 9999999 79999999999884
No 23
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.30 E-value=1.4e-06 Score=66.88 Aligned_cols=69 Identities=23% Similarity=0.254 Sum_probs=47.3
Q ss_pred CCeEEeCCEeEEEECCC--CeEEEEcCCCCCCCCCCCCccccCCC-ceEEEecCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 47 GKTFAVGDSLVFNYGSG--HTVDEVSGSDYNSCTVGNAITSDSSG-ATTITLKTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~--hsV~~V~~~~Y~~C~~s~pi~~~s~G-~~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
..+++.||+|+|..... |+|...+... ..=.... .....| ...++++++|+|.|.|.. |. ||+..|.|.
T Consensus 61 ~i~V~~GdtV~~~N~d~~~H~v~~~~~~~-g~~~~~s--~~l~pG~t~~~tF~~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 61 EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG--EMMTKDQAYAITFNEAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC--CCBCTTEEEEEEECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCceEEEEeCCCC-Ccccccc--cccCCCCEEEEEcCCCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 56889999999997764 9998754321 0000000 012223 457889999999999997 76 999999884
No 24
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.17 E-value=2.6e-06 Score=64.78 Aligned_cols=80 Identities=23% Similarity=0.292 Sum_probs=55.6
Q ss_pred cCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC-CeEEEEcCCCCCCCCCCC--CccccCCCceEEEecCCceEEEEcC
Q 029725 30 GESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGN--AITSDSSGATTITLKTAGTHYFICG 106 (189)
Q Consensus 30 G~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~-hsV~~V~~~~Y~~C~~s~--pi~~~s~G~~~v~L~~~G~~YFiC~ 106 (189)
|++.+..+.|+ ..++++||+|.|.+... |+|...+. +-... ......+....++++++|.|+|+|.
T Consensus 11 g~~g~~~F~P~------~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~ 79 (122)
T 2ux6_A 11 GKDGAMVFEPA------SLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCT 79 (122)
T ss_dssp ETTEEEEEESS------EEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEET
T ss_pred CCCCCceEeCC------EEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeC
Confidence 54434555543 56889999999999876 99987531 11111 1111123346889999999999999
Q ss_pred CCCCCCCCCeEEEEecCC
Q 029725 107 VPGHCGSGMKLAVTVGSG 124 (189)
Q Consensus 107 v~~HC~~GmKl~I~V~~~ 124 (189)
. |+. |+..|.|...
T Consensus 80 ~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 80 P--HPF--MVGVVQVGDA 93 (122)
T ss_dssp T--EEE--EEEEEEESSS
T ss_pred C--Ccc--CEEEEEEeCC
Confidence 7 887 9999999853
No 25
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.16 E-value=4.8e-06 Score=59.81 Aligned_cols=87 Identities=20% Similarity=0.240 Sum_probs=57.3
Q ss_pred EEEecCC-CCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCCCCCCCC-------C-CCccccCCCceEEE
Q 029725 26 VYNVGES-SGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSDYNSCTV-------G-NAITSDSSGATTIT 94 (189)
Q Consensus 26 ~~~VG~~-~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~Y~~C~~-------s-~pi~~~s~G~~~v~ 94 (189)
+..+|.+ .+..+.++ ..+++.||+|+|..... |++..-... ..+.. . +......+....++
T Consensus 4 ~V~~~~~~~~~~f~p~------~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~~~~ 75 (105)
T 3cvb_A 4 TVKMGADSGLFQFEPA------NVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESYEIT 75 (105)
T ss_dssp EEEESCTTCCSCEESS------EEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEeecCCccEEeCC------EEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeEEEE
Confidence 3456653 55666553 56889999999987763 998764321 11200 0 00111223345777
Q ss_pred e---cCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 95 L---KTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 95 L---~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+ +++|+|+|.|. .|+..||+-.|.|.
T Consensus 76 f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 76 FSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp ECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 7 79999999999 79999999999986
No 26
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.16 E-value=7.5e-07 Score=64.53 Aligned_cols=68 Identities=25% Similarity=0.227 Sum_probs=45.0
Q ss_pred CCeEEeCCEeEEEECCC----CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 47 GKTFAVGDSLVFNYGSG----HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~----hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
..++++||++.|.+.+. |++..-+. ..+ ..+....+....++++++|.|.|.|. .||..||+-.|.|+
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~~-~~~-----~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKKL-GID-----VVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGGG-TEE-----EEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEecC-Ccc-----eeecCCcceeEEEecccCceEEEECc--cccCCCCEEEEEEC
Confidence 57899999999987542 66544211 100 00111111224567789999999997 59999999999885
No 27
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.08 E-value=5.7e-06 Score=60.50 Aligned_cols=83 Identities=23% Similarity=0.216 Sum_probs=55.4
Q ss_pred ccEEEEecCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCC----CCCCCCCCCccccCCCceEEEec
Q 029725 23 FATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSD----YNSCTVGNAITSDSSGATTITLK 96 (189)
Q Consensus 23 ~a~~~~VG~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~----Y~~C~~s~pi~~~s~G~~~v~L~ 96 (189)
.+.++.|.- .+|.+.++ ..+++.||+|+|..... |+|...+..+ ++... + ..+....++++
T Consensus 17 ~a~~~~V~~-~~~~F~P~------~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~~----~--~pG~~~~~tf~ 83 (105)
T 2ov0_A 17 ADGAIVVDI-AKMKYETP------ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPM----M--KKEQAYSLTFT 83 (105)
T ss_dssp CTTCEEEEE-ETTEESSS------EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECCC----B--CTTEEEEEEEC
T ss_pred CCcCEEEEE-eecEEcCC------EEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccccc----c--CCCCEEEEEeC
Confidence 345555543 35666653 56889999999998765 9987643211 22110 1 12224578899
Q ss_pred CCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 97 TAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 97 ~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
++|+|+|.|.. |- ||+-.|.|.
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999997 54 999999884
No 28
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.02 E-value=1.3e-05 Score=64.65 Aligned_cols=91 Identities=20% Similarity=0.286 Sum_probs=57.5
Q ss_pred EEEEecCCCCCCCCCCCcccCCCCeE-EeCCEeEEEEC--C-------CCeEEEEcCCC---------------CCCCCC
Q 029725 25 TVYNVGESSGWTMGTDYSTWTSGKTF-AVGDSLVFNYG--S-------GHTVDEVSGSD---------------YNSCTV 79 (189)
Q Consensus 25 ~~~~VG~~~GW~~~~~Y~~Was~~tF-~vGDtLvF~y~--~-------~hsV~~V~~~~---------------Y~~C~~ 79 (189)
.++.|+.+.++.+.++ ..++ +.||++.|.+. . .|+++..+..+ |..=+-
T Consensus 43 ~~V~I~~~d~m~F~P~------~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d 116 (167)
T 3ay2_A 43 CAATVESNDNMQFNTK------DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDD 116 (167)
T ss_dssp CEEEEEECTTSCBSCS------EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTC
T ss_pred eEEEEEeCCCceEecc------eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccc
Confidence 4566776667777764 4566 67997666654 3 28988765432 211111
Q ss_pred CCCcc---ccCCC-ceEEEec----CCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 80 GNAIT---SDSSG-ATTITLK----TAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 80 s~pi~---~~s~G-~~~v~L~----~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
.+.+. ....| ...++++ ++|.|+|+|.+++|=+ |||-.|+|.
T Consensus 117 ~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 117 ARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 11111 12233 3456665 7999999999999998 999999986
No 29
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.02 E-value=1.9e-05 Score=60.83 Aligned_cols=90 Identities=17% Similarity=0.269 Sum_probs=55.7
Q ss_pred EEEecCCCCCCCCCCCcccCCCCeEEeC-CEeEEEEC--C-------CCeEEEEcCC----------------CCCCCCC
Q 029725 26 VYNVGESSGWTMGTDYSTWTSGKTFAVG-DSLVFNYG--S-------GHTVDEVSGS----------------DYNSCTV 79 (189)
Q Consensus 26 ~~~VG~~~GW~~~~~Y~~Was~~tF~vG-DtLvF~y~--~-------~hsV~~V~~~----------------~Y~~C~~ 79 (189)
+..|+.+.++.+.++ ..+++.| |++.|.+. . .|+++..+.. +|..=+-
T Consensus 4 ~v~i~~~d~m~F~p~------~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~ 77 (129)
T 1cuo_A 4 ETTVTSGDTMTYSTR------SISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGD 77 (129)
T ss_dssp EEEEEECSSSCCSCS------EEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTC
T ss_pred EEEEEeCCCceEccC------eEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccc
Confidence 344555556777664 5688999 96666553 3 2998877543 2211011
Q ss_pred CCCc---cccCCC-ceEEEec-----CCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 80 GNAI---TSDSSG-ATTITLK-----TAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 80 s~pi---~~~s~G-~~~v~L~-----~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
.+.+ .....| ...++++ ++|.|+|+|++++|=+ |||-.|+|.
T Consensus 78 ~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 78 KRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 1111 112233 2344443 8999999999999999 899999986
No 30
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.96 E-value=1.8e-05 Score=58.10 Aligned_cols=84 Identities=23% Similarity=0.207 Sum_probs=53.7
Q ss_pred EEEEecCCCCCCCCCCCcccCCCCeEEeCCEeEEEECCC--CeEEEEcCCCCCCCCCCCCccccCCC-ceEEEecCCceE
Q 029725 25 TVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG--HTVDEVSGSDYNSCTVGNAITSDSSG-ATTITLKTAGTH 101 (189)
Q Consensus 25 ~~~~VG~~~GW~~~~~Y~~Was~~tF~vGDtLvF~y~~~--hsV~~V~~~~Y~~C~~s~pi~~~s~G-~~~v~L~~~G~~ 101 (189)
.++.|.-. ++.+.|+ ..+++.||+|.|..... |+|...+... ..=.... .....| ...++++++|.|
T Consensus 20 ~~~~V~~~-~~~F~P~------~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s--~~l~~g~~~~~tf~~~G~y 89 (106)
T 1id2_A 20 DAVVVGIE-KMKYLTP------EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG--EMMTKDQAYAITFNEAGSY 89 (106)
T ss_dssp TCEEEEEE-TTEESSS------EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC--CCBCTTEEEEEEECSCEEE
T ss_pred ccEEEEEE-ecEEeCC------EEEECCCCEEEEEECCCCcEEEEEeCCCC-Ccccccc--cccCCCCEEEEEeCCCEEE
Confidence 44444322 3555553 56889999999997764 9987653220 0000000 012223 457889999999
Q ss_pred EEEcCCCCCCCCCCeEEEEec
Q 029725 102 YFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 102 YFiC~v~~HC~~GmKl~I~V~ 122 (189)
.|.|.. |. ||+..|.|.
T Consensus 90 ~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 90 DYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp EEECSS--CT--TCEEEEEEC
T ss_pred EEEeCC--CC--CCEEEEEEC
Confidence 999997 87 999999884
No 31
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.74 E-value=0.0003 Score=53.98 Aligned_cols=89 Identities=22% Similarity=0.369 Sum_probs=53.2
Q ss_pred EEecCCCCCCCCCCCcccCCCCeE-EeCCEeEEEEC--C-------CCeEEEEcCC----------------CCCCCCCC
Q 029725 27 YNVGESSGWTMGTDYSTWTSGKTF-AVGDSLVFNYG--S-------GHTVDEVSGS----------------DYNSCTVG 80 (189)
Q Consensus 27 ~~VG~~~GW~~~~~Y~~Was~~tF-~vGDtLvF~y~--~-------~hsV~~V~~~----------------~Y~~C~~s 80 (189)
..|+.+.++.+.++ ..++ +.||++.|.|. . +|+++..+.+ +|..=+-.
T Consensus 4 v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~ 77 (128)
T 2iaa_C 4 VSIEGNDSMQFNTK------SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDE 77 (128)
T ss_dssp EEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCT
T ss_pred EEEEeCCCceEecC------EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccc
Confidence 34555556777764 3344 45996666664 3 2998876533 22211111
Q ss_pred CCcc---ccCCC-ceEEEec----CCce-EEEEcCCCCCCCCCCeEEEEec
Q 029725 81 NAIT---SDSSG-ATTITLK----TAGT-HYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 81 ~pi~---~~s~G-~~~v~L~----~~G~-~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
+.+. ....| ...++++ ++|. |.|+|++++|=+ |||-.|+|.
T Consensus 78 ~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 78 RVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred hhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 1111 12233 3455554 6795 999999999999 999999986
No 32
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.67 E-value=0.00014 Score=55.85 Aligned_cols=90 Identities=22% Similarity=0.322 Sum_probs=54.5
Q ss_pred EEEecCCCCCCCCCCCcccCCCCeE-EeCCEeEEEECC---------CCeEEEEcCCC----------------CCCCCC
Q 029725 26 VYNVGESSGWTMGTDYSTWTSGKTF-AVGDSLVFNYGS---------GHTVDEVSGSD----------------YNSCTV 79 (189)
Q Consensus 26 ~~~VG~~~GW~~~~~Y~~Was~~tF-~vGDtLvF~y~~---------~hsV~~V~~~~----------------Y~~C~~ 79 (189)
+..|+.+.++.+.++ ..++ +.||++.|.+.+ .|+++..+.++ |..=+-
T Consensus 4 ~v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~ 77 (128)
T 1nwp_A 4 KVTVDSTDQMSFNTK------DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGD 77 (128)
T ss_dssp EEEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTC
T ss_pred EEEEEeCCCccEecC------EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccccccc
Confidence 445665556777764 4566 679977666643 29988764322 211011
Q ss_pred CCCcc---ccCCC-ceEEEec----CCce-EEEEcCCCCCCCCCCeEEEEec
Q 029725 80 GNAIT---SDSSG-ATTITLK----TAGT-HYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 80 s~pi~---~~s~G-~~~v~L~----~~G~-~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
.+.+. ....| ...++++ ++|. |.|+|++++|=+ |||-.|+|.
T Consensus 78 ~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 78 ARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred chhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 11111 12233 3455554 5776 999999999999 999999884
No 33
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.65 E-value=0.00023 Score=54.70 Aligned_cols=90 Identities=19% Similarity=0.325 Sum_probs=52.5
Q ss_pred EEEecCCCCCCCCCCCcccCCCCeE-EeCCEeEEEEC--C-------CCeEEEEcCC----------------CCCCCCC
Q 029725 26 VYNVGESSGWTMGTDYSTWTSGKTF-AVGDSLVFNYG--S-------GHTVDEVSGS----------------DYNSCTV 79 (189)
Q Consensus 26 ~~~VG~~~GW~~~~~Y~~Was~~tF-~vGDtLvF~y~--~-------~hsV~~V~~~----------------~Y~~C~~ 79 (189)
+..|+.+.+..+.++ ..++ +.||++.|.+. . .|+++..+.+ +|..=+-
T Consensus 4 ~v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (129)
T 2ccw_A 4 EATVESNDAMQYNVK------EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGD 77 (129)
T ss_dssp EEEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTC
T ss_pred EEEEEeCCCccEecc------eEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccc
Confidence 345555556777654 2344 44996666664 3 2998876543 2221111
Q ss_pred CCCcc---ccCCC-ceEEEec----CCce-EEEEcCCCCCCCCCCeEEEEec
Q 029725 80 GNAIT---SDSSG-ATTITLK----TAGT-HYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 80 s~pi~---~~s~G-~~~v~L~----~~G~-~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
.+.+. ....| ...++++ ++|. |+|+|.+++|=+ |||-.|+|.
T Consensus 78 ~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 78 TRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 11111 12223 3345544 5665 999999999998 999999985
No 34
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.64 E-value=1.1e-05 Score=65.87 Aligned_cols=77 Identities=23% Similarity=0.396 Sum_probs=51.5
Q ss_pred EeCCEeEEE---ECC------C-CeEEEEcCCCCCCCCCCC-C--ccc--cCCCceEEEec-------------CCc-eE
Q 029725 51 AVGDSLVFN---YGS------G-HTVDEVSGSDYNSCTVGN-A--ITS--DSSGATTITLK-------------TAG-TH 101 (189)
Q Consensus 51 ~vGDtLvF~---y~~------~-hsV~~V~~~~Y~~C~~s~-p--i~~--~s~G~~~v~L~-------------~~G-~~ 101 (189)
++||.|-|- |.. . +.|++|++++|+.|+... + +.. -..+...+++. ++| .|
T Consensus 27 ~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~~Y 106 (178)
T 1iko_P 27 QIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKDY 106 (178)
T ss_dssp CTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTEEE
T ss_pred cCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCce
Confidence 569999886 322 2 678999999999998763 2 111 11233444432 467 79
Q ss_pred EEEcCCC-----------CCCCC-CCeEEEEecCCCCC
Q 029725 102 YFICGVP-----------GHCGS-GMKLAVTVGSGSPT 127 (189)
Q Consensus 102 YFiC~v~-----------~HC~~-GmKl~I~V~~~~~~ 127 (189)
||||.-. ++|.. +|||.|+|...+..
T Consensus 107 Y~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~ 144 (178)
T 1iko_P 107 YIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASS 144 (178)
T ss_dssp EEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC---
T ss_pred EEEecCCcccccccccCCCccccceeEEEEEeecCCCC
Confidence 9999854 68976 89999999876544
No 35
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=97.61 E-value=5.8e-05 Score=61.54 Aligned_cols=76 Identities=20% Similarity=0.298 Sum_probs=49.3
Q ss_pred CeEEeCCEeEEE---ECC-------C-CeEEEEcCCCCCCCCCCCCcc-------cc-CCCceEEEec------------
Q 029725 48 KTFAVGDSLVFN---YGS-------G-HTVDEVSGSDYNSCTVGNAIT-------SD-SSGATTITLK------------ 96 (189)
Q Consensus 48 ~tF~vGDtLvF~---y~~-------~-hsV~~V~~~~Y~~C~~s~pi~-------~~-s~G~~~v~L~------------ 96 (189)
...++||.|-+- |+. . ..+++|++++|++|+..+.-. .. ..|..++++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 457789999875 432 2 457899999999998755321 11 1244333321
Q ss_pred -CCc-eEEEEcCCC-----CCCCCCCeEEEEecCCCC
Q 029725 97 -TAG-THYFICGVP-----GHCGSGMKLAVTVGSGSP 126 (189)
Q Consensus 97 -~~G-~~YFiC~v~-----~HC~~GmKl~I~V~~~~~ 126 (189)
++| .||||++-. +-| |||+|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 467 688997522 345 999999987654
No 36
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.12 E-value=0.0012 Score=51.00 Aligned_cols=65 Identities=25% Similarity=0.346 Sum_probs=45.2
Q ss_pred CCeEEeCCEeEEEECCC---CeEEEEcCCCCCCCCCCCCccccCCC---ceEEEecCCceEEEEcCCCCCCC---CCCeE
Q 029725 47 GKTFAVGDSLVFNYGSG---HTVDEVSGSDYNSCTVGNAITSDSSG---ATTITLKTAGTHYFICGVPGHCG---SGMKL 117 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~---hsV~~V~~~~Y~~C~~s~pi~~~s~G---~~~v~L~~~G~~YFiC~v~~HC~---~GmKl 117 (189)
..++.+||.+.|...+. |++..-+. +.+ ....-| ...++++++|.|+|.|.. +|. .+|+.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~-~~k--------~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~g 129 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGT-NIN--------VEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMFG 129 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTS-SCE--------EEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCC-Cce--------eEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCEE
Confidence 56899999999999653 77654211 100 011113 357889999999999986 443 68999
Q ss_pred EEEec
Q 029725 118 AVTVG 122 (189)
Q Consensus 118 ~I~V~ 122 (189)
.|+|.
T Consensus 130 ~v~V~ 134 (135)
T 2cua_A 130 TIVVK 134 (135)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 37
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.09 E-value=0.0006 Score=49.76 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=42.3
Q ss_pred CCeEEeCCEeEEEECCC----CeEEEEcCCCCCCCCCCCCccccCCCceEE--EecCCceEEEEcCCCCCCCC-CCeEEE
Q 029725 47 GKTFAVGDSLVFNYGSG----HTVDEVSGSDYNSCTVGNAITSDSSGATTI--TLKTAGTHYFICGVPGHCGS-GMKLAV 119 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~----hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v--~L~~~G~~YFiC~v~~HC~~-GmKl~I 119 (189)
..+++.||.++|.+.+. |++..-+. + .+ .....+....+ +.+++|.|+|.|.. ||.. +|+..|
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~-~-----~~--~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~i 108 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF-G-----VQ--EVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGTL 108 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG-T-----EE--EEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC-C-----ce--eEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEEE
Confidence 56889999999977542 77643221 1 01 11112222344 44899999999997 7753 499999
Q ss_pred Eec
Q 029725 120 TVG 122 (189)
Q Consensus 120 ~V~ 122 (189)
.|.
T Consensus 109 ~V~ 111 (112)
T 1iby_A 109 NVV 111 (112)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
No 38
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=97.06 E-value=0.001 Score=54.37 Aligned_cols=99 Identities=18% Similarity=0.286 Sum_probs=55.0
Q ss_pred ccccEEEEecCCCCCCCC-CCCcccCCCCeEEeCCEeEEE---ECC--------C-CeEEEEcCCCCCCCCCCC-Cccc-
Q 029725 21 PSFATVYNVGESSGWTMG-TDYSTWTSGKTFAVGDSLVFN---YGS--------G-HTVDEVSGSDYNSCTVGN-AITS- 85 (189)
Q Consensus 21 ~a~a~~~~VG~~~GW~~~-~~Y~~Was~~tF~vGDtLvF~---y~~--------~-hsV~~V~~~~Y~~C~~s~-pi~~- 85 (189)
.+++..+.| -|... +-+..=-.....++||.|-+- |.. . ..+++|++++|++|+... +...
T Consensus 26 ~~sa~rh~V----yWNSsNp~F~~~~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~ 101 (182)
T 3czu_B 26 MDAADRHTV----FWNSSNPKFRNEDYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRW 101 (182)
T ss_dssp ---CCEEEE----ECSTTCGGGTTSCCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEE
T ss_pred hhhccccce----EEcCCCccccCCCceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEE
Confidence 344556655 48753 211110123356889999886 332 1 457899999999998764 2111
Q ss_pred -----cC-CCceEEEec-------------CCc-eEEEEcC----CCCCCCCCCeEEEEecCCCC
Q 029725 86 -----DS-SGATTITLK-------------TAG-THYFICG----VPGHCGSGMKLAVTVGSGSP 126 (189)
Q Consensus 86 -----~s-~G~~~v~L~-------------~~G-~~YFiC~----v~~HC~~GmKl~I~V~~~~~ 126 (189)
.. .|..++++. ++| .||||+. .++.| |||.|.|.....
T Consensus 102 ~C~~P~~~~~p~kftikFQ~FSP~p~GlEF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 102 QCNRPSAKHGPEKLSEKFQRFTPFTLGKEFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp EECCTTCTTSCCEEEEECCSCCSCTTSCCCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred EeCCCCCCCCCcEEEEEEEEcCCCCCCeeEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 11 232222211 467 6889986 23555 999999986554
No 39
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.35 E-value=0.0022 Score=50.35 Aligned_cols=74 Identities=23% Similarity=0.343 Sum_probs=48.7
Q ss_pred EEeCCEeEEEECC---------C-CeEEEEcCCCCCCCCCCC-Cccc----cCCCceEEEec-------------CCc-e
Q 029725 50 FAVGDSLVFNYGS---------G-HTVDEVSGSDYNSCTVGN-AITS----DSSGATTITLK-------------TAG-T 100 (189)
Q Consensus 50 F~vGDtLvF~y~~---------~-hsV~~V~~~~Y~~C~~s~-pi~~----~s~G~~~v~L~-------------~~G-~ 100 (189)
.++||.|-|-=.. . ..+++|++++|+.|+... +... -..+..++++. ++| .
T Consensus 25 v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~~ 104 (140)
T 2vsm_B 25 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNKD 104 (140)
T ss_dssp CCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 3578999886332 1 567899999999998763 2111 12333443332 577 6
Q ss_pred EEEEcCCC-----------CCCCC-CCeEEEEecC
Q 029725 101 HYFICGVP-----------GHCGS-GMKLAVTVGS 123 (189)
Q Consensus 101 ~YFiC~v~-----------~HC~~-GmKl~I~V~~ 123 (189)
||||+.-. |-|.. .|||.|.|..
T Consensus 105 YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 105 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred eEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 88998733 47865 8999999964
No 40
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=96.31 E-value=0.0038 Score=49.04 Aligned_cols=74 Identities=23% Similarity=0.265 Sum_probs=48.2
Q ss_pred eEEeCCEeEEE---ECC---------C-CeEEEEcCCCCCCCCCC-CCcccc----CCCceEEEec-------------C
Q 029725 49 TFAVGDSLVFN---YGS---------G-HTVDEVSGSDYNSCTVG-NAITSD----SSGATTITLK-------------T 97 (189)
Q Consensus 49 tF~vGDtLvF~---y~~---------~-hsV~~V~~~~Y~~C~~s-~pi~~~----s~G~~~v~L~-------------~ 97 (189)
..++||.|-+- |.. . ..+++|++++|++|+.. ++...+ ..+..++++. +
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 45788999886 332 2 56889999999999876 232111 1232222211 4
Q ss_pred Cc-eEEEEcCCC-----------CCCCC-CCeEEEEec
Q 029725 98 AG-THYFICGVP-----------GHCGS-GMKLAVTVG 122 (189)
Q Consensus 98 ~G-~~YFiC~v~-----------~HC~~-GmKl~I~V~ 122 (189)
+| .||||+.-. |-|.. .|||.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 67 689999743 56865 899999986
No 41
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.21 E-value=0.0051 Score=48.17 Aligned_cols=75 Identities=20% Similarity=0.315 Sum_probs=48.2
Q ss_pred CeEEeCCEeEEE---ECC-------C-CeEEEEcCCCCCCCCCCCCc-cc------c-CCCceEEEec------------
Q 029725 48 KTFAVGDSLVFN---YGS-------G-HTVDEVSGSDYNSCTVGNAI-TS------D-SSGATTITLK------------ 96 (189)
Q Consensus 48 ~tF~vGDtLvF~---y~~-------~-hsV~~V~~~~Y~~C~~s~pi-~~------~-s~G~~~v~L~------------ 96 (189)
...++||.|-+- |.. . ..+++|++++|++|+....- .. . ..|..++++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 356789999875 432 1 45789999999999875432 11 1 1244333321
Q ss_pred -CCc-eEEEEcCC-----CCCCCCCCeEEEEecCCC
Q 029725 97 -TAG-THYFICGV-----PGHCGSGMKLAVTVGSGS 125 (189)
Q Consensus 97 -~~G-~~YFiC~v-----~~HC~~GmKl~I~V~~~~ 125 (189)
++| .||||++- ++-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 377 68899753 2346 99999998654
No 42
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=95.76 E-value=0.02 Score=45.67 Aligned_cols=75 Identities=23% Similarity=0.391 Sum_probs=46.3
Q ss_pred eEEeCCEeEEE---ECCC---------CeEEEEcCCCCCCCCCCCCcc-c------c-CCCceEEEe--c----------
Q 029725 49 TFAVGDSLVFN---YGSG---------HTVDEVSGSDYNSCTVGNAIT-S------D-SSGATTITL--K---------- 96 (189)
Q Consensus 49 tF~vGDtLvF~---y~~~---------hsV~~V~~~~Y~~C~~s~pi~-~------~-s~G~~~v~L--~---------- 96 (189)
.+++||.|-+- |..+ ..+++|++++|++|+....-. . . ..|..++++ .
T Consensus 33 ~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~E 112 (157)
T 2wo3_B 33 EVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGFE 112 (157)
T ss_dssp EECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSCC
T ss_pred EeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCee
Confidence 56789999886 3221 347899999999998765211 1 1 123323321 1
Q ss_pred -CCc-eEEEEcCCC-----CCCCCCCeEEEEecCCCC
Q 029725 97 -TAG-THYFICGVP-----GHCGSGMKLAVTVGSGSP 126 (189)
Q Consensus 97 -~~G-~~YFiC~v~-----~HC~~GmKl~I~V~~~~~ 126 (189)
++| .||||+.-. +-| |||.|.|.....
T Consensus 113 F~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~~ 146 (157)
T 2wo3_B 113 FRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQE 146 (157)
T ss_dssp CCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC-
T ss_pred eeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCCC
Confidence 467 689999643 446 588888876543
No 43
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.51 E-value=0.029 Score=44.98 Aligned_cols=64 Identities=25% Similarity=0.352 Sum_probs=44.3
Q ss_pred CCeEEeCCEeEEEECCC---CeEEEEcCCCCCCCCCCCCcc-ccCCC---ceEEEecCCceEEEEcCCCCCCC---CCCe
Q 029725 47 GKTFAVGDSLVFNYGSG---HTVDEVSGSDYNSCTVGNAIT-SDSSG---ATTITLKTAGTHYFICGVPGHCG---SGMK 116 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~---hsV~~V~~~~Y~~C~~s~pi~-~~s~G---~~~v~L~~~G~~YFiC~v~~HC~---~GmK 116 (189)
...+.+|+.++|...+. |+...-+.. ++ ...-| ...++.+++|.||+.|.. .|. .+|+
T Consensus 94 ~l~VP~G~~Vr~~vTS~DViHsf~IP~lg----------ik~da~PG~~n~~~~~~~kpG~y~g~Cse--~CG~~Hs~M~ 161 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPDVIHGFHVEGTN----------INVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMF 161 (168)
T ss_dssp SEEEETTSEEEEEEECSSSCEEEEETTSS----------CEEEECTTBCEEEEEECCSCEEEEEECCS--CCSTTGGGCE
T ss_pred EEEEeCCCeEEEEEecCCceEEEEECCCC----------eEEEecCCceeEEEEEeCCCEEEEEECCc--CCCCCcCCCE
Confidence 55789999999988764 776552211 11 11112 357889999999999995 454 4699
Q ss_pred EEEEec
Q 029725 117 LAVTVG 122 (189)
Q Consensus 117 l~I~V~ 122 (189)
..|+|.
T Consensus 162 g~V~V~ 167 (168)
T 3s8f_B 162 GTIVVK 167 (168)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999986
No 44
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=94.85 E-value=0.018 Score=51.01 Aligned_cols=76 Identities=18% Similarity=0.292 Sum_probs=51.3
Q ss_pred CCCeEEeCCEeEEEECCC----CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCCCeEEEEe
Q 029725 46 SGKTFAVGDSLVFNYGSG----HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 121 (189)
Q Consensus 46 s~~tF~vGDtLvF~y~~~----hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V 121 (189)
...+++.||+|+|++.+. |++..-.......|. +....+-...|+++++|+|+|.|.+.+|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~----i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV----NGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB----CSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee----cCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 357889999999988653 666432222212232 221111224667789999999999988888899999999
Q ss_pred cCCC
Q 029725 122 GSGS 125 (189)
Q Consensus 122 ~~~~ 125 (189)
....
T Consensus 131 ~~~~ 134 (447)
T 2dv6_A 131 LPGN 134 (447)
T ss_dssp ESSC
T ss_pred eCCc
Confidence 8644
No 45
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.68 E-value=0.035 Score=52.80 Aligned_cols=65 Identities=20% Similarity=0.312 Sum_probs=45.0
Q ss_pred CCeEEeCCEeEEEECC-----C--CeEEEEcCCCCCCCCCCCCcc-ccCCC---ceEEEecCCceEEEEcCCCCCCCC--
Q 029725 47 GKTFAVGDSLVFNYGS-----G--HTVDEVSGSDYNSCTVGNAIT-SDSSG---ATTITLKTAGTHYFICGVPGHCGS-- 113 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~-----~--hsV~~V~~~~Y~~C~~s~pi~-~~s~G---~~~v~L~~~G~~YFiC~v~~HC~~-- 113 (189)
..++.+||++.|...+ . |++..-.. . +. ...-| ...++.+++|.|||.|+. +|..
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---G-------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~H 626 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---G-------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHALH 626 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTT---T-------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTC
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecCC---C-------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCc
Confidence 5688999999998765 2 77654221 0 11 11122 246788999999999997 6655
Q ss_pred -CCeEEEEecC
Q 029725 114 -GMKLAVTVGS 123 (189)
Q Consensus 114 -GmKl~I~V~~ 123 (189)
+|+..|.|++
T Consensus 627 s~M~G~ViVEP 637 (638)
T 3sbq_A 627 MEMVGRMMVEP 637 (638)
T ss_dssp TTCEEEEEEEC
T ss_pred ccceEEEEEec
Confidence 4999999974
No 46
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.66 E-value=0.27 Score=37.62 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=21.0
Q ss_pred eEEEec-----CCceEEEEcCCCCCCCCCCeEEEEec
Q 029725 91 TTITLK-----TAGTHYFICGVPGHCGSGMKLAVTVG 122 (189)
Q Consensus 91 ~~v~L~-----~~G~~YFiC~v~~HC~~GmKl~I~V~ 122 (189)
..++++ ++|.|-|+|+ +|= |||-.|.|.
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 455555 5699999999 886 999999874
No 47
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.07 E-value=0.064 Score=50.67 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=44.7
Q ss_pred CCeEEeCCEeEEEECCC-------CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCC---CCCCCCCCe
Q 029725 47 GKTFAVGDSLVFNYGSG-------HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGV---PGHCGSGMK 116 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~-------hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v---~~HC~~GmK 116 (189)
..+++.||++.|...+. |++..-. ...+ + .+....+-...|+++++|.|||.|.. ..| .||+
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv~-~----~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~gM~ 585 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGVA-M----EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--MEMR 585 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTEE-E----EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--TTCE
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCcc-e----eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--cCCE
Confidence 45788999999997651 6654322 1100 1 11111112247788999999999984 255 4999
Q ss_pred EEEEecCC
Q 029725 117 LAVTVGSG 124 (189)
Q Consensus 117 l~I~V~~~ 124 (189)
..|.|.+.
T Consensus 586 G~IiV~p~ 593 (595)
T 1fwx_A 586 GRMLVEPK 593 (595)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999854
No 48
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=91.56 E-value=0.15 Score=39.51 Aligned_cols=73 Identities=21% Similarity=0.317 Sum_probs=44.3
Q ss_pred eEEeCCEeEEEECC-----------C-CeEEEEcCCCCCCCCCCC-Ccc------ccC-CCceEEEec------------
Q 029725 49 TFAVGDSLVFNYGS-----------G-HTVDEVSGSDYNSCTVGN-AIT------SDS-SGATTITLK------------ 96 (189)
Q Consensus 49 tF~vGDtLvF~y~~-----------~-hsV~~V~~~~Y~~C~~s~-pi~------~~s-~G~~~v~L~------------ 96 (189)
..++||.|-+-=.. . ..+++|++++|++|+... +.. ... .|..++++.
T Consensus 23 ~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~E 102 (132)
T 3hei_B 23 HVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGKE 102 (132)
T ss_dssp EECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSCC
T ss_pred EeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCee
Confidence 56789999775322 1 457899999999999765 221 111 344333311
Q ss_pred -CCc-eEEEEcCCCCCCCCC--CeEEEEec
Q 029725 97 -TAG-THYFICGVPGHCGSG--MKLAVTVG 122 (189)
Q Consensus 97 -~~G-~~YFiC~v~~HC~~G--mKl~I~V~ 122 (189)
++| .||||+. +.|=..+ +||.|.|.
T Consensus 103 F~pG~~YY~ISt-~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 103 FKEGHSYYYISK-PIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCTTCEEEEEEE-ESSCCCCSCCEEEEEEC
T ss_pred ecCCCcEEEEEc-cCCCCCCcceEEEEEEE
Confidence 467 6888887 3332222 78888774
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=84.40 E-value=0.83 Score=38.90 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=46.9
Q ss_pred CeEEeCCEeEEEECCC------CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCC-----CCCCCCe
Q 029725 48 KTFAVGDSLVFNYGSG------HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPG-----HCGSGMK 116 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~------hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~-----HC~~GmK 116 (189)
.+++.||+|++++.+. |.+..-...+.+.-..-..+....+-...|+++++|++||-|-..+ |=..||.
T Consensus 66 i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~ 145 (333)
T 1mzy_A 66 MIVHEGDYVELTLINPPENTMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMA 145 (333)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCE
T ss_pred EEecCCCEEEEEEEECCCCcccccceecCCCCCCCCCceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCE
Confidence 4778999999988652 6665422111111010011211111124677789999999998764 6667999
Q ss_pred EEEEecCCC
Q 029725 117 LAVTVGSGS 125 (189)
Q Consensus 117 l~I~V~~~~ 125 (189)
-.+.|....
T Consensus 146 G~~iV~~~~ 154 (333)
T 1mzy_A 146 GCIMVLPRD 154 (333)
T ss_dssp EEEEEECTT
T ss_pred EEEEEccCc
Confidence 988887543
No 50
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=82.96 E-value=1 Score=38.31 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=46.3
Q ss_pred CCeEEeCCEeEEEECC-----C-CeEEEEcCCCCCCCCCCCCccccCCC---ceEEEecCCceEEEEcCCCC----CCCC
Q 029725 47 GKTFAVGDSLVFNYGS-----G-HTVDEVSGSDYNSCTVGNAITSDSSG---ATTITLKTAGTHYFICGVPG----HCGS 113 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~-----~-hsV~~V~~~~Y~~C~~s~pi~~~s~G---~~~v~L~~~G~~YFiC~v~~----HC~~ 113 (189)
..+++.||+|++++.+ . |++..-.....+. ..++....-| ...|+++++|+|||-|...+ |=..
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~~---~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 142 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGALG---GAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCCC---CcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhC
Confidence 3577899999988765 2 6654421110000 0111112223 24667789999999998754 4467
Q ss_pred CCeEEEEecCCC
Q 029725 114 GMKLAVTVGSGS 125 (189)
Q Consensus 114 GmKl~I~V~~~~ 125 (189)
||.-.+.|....
T Consensus 143 Gl~G~liV~~~~ 154 (336)
T 1oe1_A 143 GMSGTLMVLPRD 154 (336)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEecCc
Confidence 999999888543
No 51
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=80.92 E-value=2.4 Score=36.62 Aligned_cols=67 Identities=16% Similarity=0.232 Sum_probs=41.9
Q ss_pred eEEeCCEeEEEECCC---CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCC---CeEEEEec
Q 029725 49 TFAVGDSLVFNYGSG---HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSG---MKLAVTVG 122 (189)
Q Consensus 49 tF~vGDtLvF~y~~~---hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~G---mKl~I~V~ 122 (189)
.+.+|+.++|.-.+. |+...-.-.--..+.+.. .-...++.+++|.||..|+. .|..| |++.|+|.
T Consensus 192 vlP~g~~V~~~ltS~DViHsf~iP~lg~k~daiPG~------~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vv 263 (298)
T 3hb3_B 192 VVPVGKKVLVQVTATDVIHAWTIPAFAVKQDAVPGR------IAQLWFSVDQEGVYFGQCSE--LCGINHAYMPIVVKAV 263 (298)
T ss_dssp EEESSSEEEEEEEESSSCEEEEEGGGTEEEEECTTC------CEEEEEECSSSEEEEECCCS--CCSTTTTSCCEEEEEE
T ss_pred EEEcCCEEEEEEEeCCccceeeEcccCceEEecCCc------eEEEEEEeCCCEEEEEEccc--ccCcCccCCeeEEEEE
Confidence 566888888888764 665542110000011110 01246789999999999995 67654 99999987
Q ss_pred C
Q 029725 123 S 123 (189)
Q Consensus 123 ~ 123 (189)
+
T Consensus 264 s 264 (298)
T 3hb3_B 264 S 264 (298)
T ss_dssp C
T ss_pred c
Confidence 5
No 52
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=79.60 E-value=2.4 Score=34.94 Aligned_cols=67 Identities=21% Similarity=0.241 Sum_probs=41.5
Q ss_pred CeEEeCCEeEEEECCC---CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCC---CeEEEEe
Q 029725 48 KTFAVGDSLVFNYGSG---HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSG---MKLAVTV 121 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~---hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~G---mKl~I~V 121 (189)
..+.+|+.++|.-.+. |+...-.-. -..+.- | ...-...++.+++|.||..|.. .|..| |++.|.|
T Consensus 43 l~lP~g~~V~~~lTS~DViHSF~IP~lg--vK~dai-P---Gr~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v~v 114 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVMHSFFIPRLG--SQIYAM-A---GMQTRLHLIANEPGTYDGICAE--ICGPGHSGMKFKAIA 114 (205)
T ss_dssp EEEETTSCEEEEEEESSSCEEEEEGGGT--EEEEEC-T---TCCEEEEECCSSSEEEEEEECS--CCSTTSTTCCEEEEE
T ss_pred EEEeCCCEEEEEEecCCceeeEEecccC--cEEEec-C---CceEEEEEEeCCCeEEEEEccc--ccccchhhceEEEEE
Confidence 3667888888888764 665542110 001100 0 0011246778899999999985 67654 9999988
Q ss_pred c
Q 029725 122 G 122 (189)
Q Consensus 122 ~ 122 (189)
.
T Consensus 115 v 115 (205)
T 1cyx_A 115 T 115 (205)
T ss_dssp E
T ss_pred E
Confidence 7
No 53
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=79.18 E-value=3.9 Score=35.60 Aligned_cols=68 Identities=16% Similarity=0.117 Sum_probs=43.3
Q ss_pred CCeEEeCCEeEEEECCC---CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCC---CeEEEE
Q 029725 47 GKTFAVGDSLVFNYGSG---HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSG---MKLAVT 120 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~---hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~G---mKl~I~ 120 (189)
...+.+|..++|.-++. |+...-.-.-=..+.+.. .-...++.+++|.||..|+. .|..| |++.|+
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~IP~lg~k~DaiPGr------~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~ 223 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGM------QTRLHLIANEPGTYDGISAS--YSGPGFSGMKFKAI 223 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEEGGGTEEEEECBTS------CEEEEEECCSCBCCEEBCCS--CCSTTTTTCCEECC
T ss_pred eEEEeCCCEEEEEEEeCCccceeeecccCcEEeecCCc------ceeeEEecCCCeEEEEeccc--cchhhHHhccceEE
Confidence 34678999999999875 665542111000011111 11246789999999999985 77664 999888
Q ss_pred ec
Q 029725 121 VG 122 (189)
Q Consensus 121 V~ 122 (189)
|.
T Consensus 224 vv 225 (315)
T 1fft_B 224 AT 225 (315)
T ss_dssp BC
T ss_pred Ee
Confidence 87
No 54
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=78.55 E-value=3.1 Score=35.17 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=43.2
Q ss_pred CeEEeCCEeEEEECCC---CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCC---CeEEEEe
Q 029725 48 KTFAVGDSLVFNYGSG---HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSG---MKLAVTV 121 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~---hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~G---mKl~I~V 121 (189)
..+.+|+.++|.-.+. |+...-.-.--....+.. .-...++.+++|.||..|+. -|..| |++.|+|
T Consensus 173 l~lP~g~~v~~~~tS~DViHsf~ip~l~~k~da~PG~------~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v~v 244 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVIHSWTVPAFGVKQDAVPGR------LAQLWFRAEREGIFFGQCSE--LCGISHAYMPITVKV 244 (262)
T ss_dssp EEEETTSEEEEEEEESSSCEEEEEGGGTEEEEECBTC------CEEEEEECCSCEEEEECCCS--CCSTTGGGCCEEEEE
T ss_pred EEEecCCEEEEEEEECcccceeeecccCceEEecCCc------eeEEEEecCCcEEEEEEChH--hcccCcccCeEEEEE
Confidence 3678899999988764 665542111000011110 11246789999999999995 78765 9998888
Q ss_pred cC
Q 029725 122 GS 123 (189)
Q Consensus 122 ~~ 123 (189)
.+
T Consensus 245 v~ 246 (262)
T 2gsm_B 245 VS 246 (262)
T ss_dssp EC
T ss_pred Ec
Confidence 64
No 55
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=72.46 E-value=2.9 Score=35.51 Aligned_cols=75 Identities=21% Similarity=0.279 Sum_probs=45.8
Q ss_pred CeEEeCCEeEEEECC-----C-CeEEEEcCCCCCCCCCCCCccccCCC---ceEEEecCCceEEEEcCCCC----CCCCC
Q 029725 48 KTFAVGDSLVFNYGS-----G-HTVDEVSGSDYNSCTVGNAITSDSSG---ATTITLKTAGTHYFICGVPG----HCGSG 114 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~-----~-hsV~~V~~~~Y~~C~~s~pi~~~s~G---~~~v~L~~~G~~YFiC~v~~----HC~~G 114 (189)
.+++.||+|++++.+ . |.+..-.....+. ..+.....-| ...|+++++|+|||-|...+ |=..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~~---~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGALG---GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCCC---CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 467899999998865 2 6654321111000 0111112222 24677789999999998764 55679
Q ss_pred CeEEEEecCCC
Q 029725 115 MKLAVTVGSGS 125 (189)
Q Consensus 115 mKl~I~V~~~~ 125 (189)
|.-.+.|....
T Consensus 150 l~G~~iV~~~~ 160 (340)
T 2bw4_A 150 MNGAIMVLPRD 160 (340)
T ss_dssp CEEEEEEECTB
T ss_pred CEEEEEEccCc
Confidence 98888887543
No 56
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=72.31 E-value=2.2 Score=36.38 Aligned_cols=74 Identities=18% Similarity=0.264 Sum_probs=43.7
Q ss_pred CCeEEeCCEeEEEECCC------CeEEE--EcCCCCCCCCCCCCccccCCCc--eEEEecCCceEEEEcCCC---CCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG------HTVDE--VSGSDYNSCTVGNAITSDSSGA--TTITLKTAGTHYFICGVP---GHCGS 113 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~------hsV~~--V~~~~Y~~C~~s~pi~~~s~G~--~~v~L~~~G~~YFiC~v~---~HC~~ 113 (189)
..+++.||++++++.+. |++.. +... |. .... .....++. ..|+.+++|+|||-|... .|=..
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~--dG-~~~~-~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~ 146 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQ--GG-GAAA-TFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIAN 146 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSG--GG-GTTT-TCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccC--CC-CCcc-eeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhc
Confidence 35789999999977543 44432 1111 10 0000 11112222 466778999999999753 35567
Q ss_pred CCeEEEEecCC
Q 029725 114 GMKLAVTVGSG 124 (189)
Q Consensus 114 GmKl~I~V~~~ 124 (189)
||.-.|.|...
T Consensus 147 Gl~G~~iV~~~ 157 (327)
T 1kbv_A 147 GMYGLILVEPK 157 (327)
T ss_dssp TCEEEEEEECT
T ss_pred ceEEEEEEecC
Confidence 99999988864
No 57
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=71.13 E-value=1.2 Score=39.36 Aligned_cols=77 Identities=17% Similarity=0.177 Sum_probs=43.9
Q ss_pred CCeEEeCCEeEEEECCC------CeEEEEcCCCCCCCCCCCCccccCCCc--eEEEecCCceEEEEcC---CCCCCCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG------HTVDEVSGSDYNSCTVGNAITSDSSGA--TTITLKTAGTHYFICG---VPGHCGSGM 115 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~------hsV~~V~~~~Y~~C~~s~pi~~~s~G~--~~v~L~~~G~~YFiC~---v~~HC~~Gm 115 (189)
..+++.||+|++++.+. |++..=-....|.=....++ ..++. ..|+++++|++||-|- ...|=..||
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG~~~~~~i--~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl 138 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGGGAESSFT--APGHTSTFNFKALNPGLYIYHCATAPVGMHIANGM 138 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGGGGGGCCB--CTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTC
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCCCCccEEE--CCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCcc
Confidence 45778999999877542 44432100000100000011 12222 4677789999999994 345666899
Q ss_pred eEEEEecCCC
Q 029725 116 KLAVTVGSGS 125 (189)
Q Consensus 116 Kl~I~V~~~~ 125 (189)
.-.+.|....
T Consensus 139 ~G~~iv~~~~ 148 (442)
T 2zoo_A 139 YGLILVEPKE 148 (442)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEeCCC
Confidence 9888888543
No 58
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=65.14 E-value=5.7 Score=33.14 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=46.5
Q ss_pred CCeEEeCCEeEEEECCC----CeEEEE--cCCCCCCCC--CCCCccccCCCceEEEecCCceEEEEcCCC---CCCCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG----HTVDEV--SGSDYNSCT--VGNAITSDSSGATTITLKTAGTHYFICGVP---GHCGSGM 115 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~----hsV~~V--~~~~Y~~C~--~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~---~HC~~Gm 115 (189)
..+++.||+|++++.+. |++..= .....|.=. ...++....+=...++.+++|++||-|-.. .|=..||
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl 146 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGL 146 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTC
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcC
Confidence 35789999999988653 444321 111111100 001222111112467788999999999875 3556799
Q ss_pred eEEEEecCCC
Q 029725 116 KLAVTVGSGS 125 (189)
Q Consensus 116 Kl~I~V~~~~ 125 (189)
.-.+.|....
T Consensus 147 ~G~liV~~~~ 156 (288)
T 3gdc_A 147 YGGFIVEPKE 156 (288)
T ss_dssp EEEEEEECSS
T ss_pred eEEEEEeCCc
Confidence 9888887654
No 59
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=64.34 E-value=9.5 Score=32.77 Aligned_cols=32 Identities=28% Similarity=0.333 Sum_probs=27.9
Q ss_pred cCCceEEEEcCCCCCCCCCCeEEEEecCCCCC
Q 029725 96 KTAGTHYFICGVPGHCGSGMKLAVTVGSGSPT 127 (189)
Q Consensus 96 ~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~ 127 (189)
+.||.++|-|-+..|=..||...+.|......
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 57999999999999999999999999876554
No 60
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=61.96 E-value=5.5 Score=32.89 Aligned_cols=31 Identities=29% Similarity=0.483 Sum_probs=25.6
Q ss_pred eEEEecCCceEEEEcCCCCCCCCC---CeEEEEecC
Q 029725 91 TTITLKTAGTHYFICGVPGHCGSG---MKLAVTVGS 123 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC~~G---mKl~I~V~~ 123 (189)
..++.+++|.||..|+. -|..| |++.|+|.+
T Consensus 182 ~~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 182 TTLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELVP 215 (227)
T ss_dssp EEECCSSCEEEEECCCS--CCSTTGGGCCEEEEEEC
T ss_pred EEEecCCcEEEEEEehh--hcccccccCeEEEEEEc
Confidence 36778999999999985 78776 899888864
No 61
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=60.23 E-value=7.9 Score=32.69 Aligned_cols=35 Identities=14% Similarity=0.046 Sum_probs=30.0
Q ss_pred eEEEecCCceEEEEcCCCCCC-CCCCeEEEEecCCC
Q 029725 91 TTITLKTAGTHYFICGVPGHC-GSGMKLAVTVGSGS 125 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~~ 125 (189)
..++.+++|.|+|.|....|+ ..||.-.++|....
T Consensus 285 vlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 285 ALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKW 320 (336)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEEcCCCceEEEEechhhccccCCCeEEEEECCCC
Confidence 467788999999999988888 89999999998544
No 62
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=55.54 E-value=9.7 Score=32.46 Aligned_cols=78 Identities=23% Similarity=0.319 Sum_probs=44.4
Q ss_pred CCeEEeCCEeEEEECCC----CeEEE----EcCC-CCCCCC-C-CCCccccCCCceEEEecCCceEEEEcCCCC--CCC-
Q 029725 47 GKTFAVGDSLVFNYGSG----HTVDE----VSGS-DYNSCT-V-GNAITSDSSGATTITLKTAGTHYFICGVPG--HCG- 112 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~----hsV~~----V~~~-~Y~~C~-~-s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~--HC~- 112 (189)
..+++.||++++++.+. +++.. +... ..|.=. . ..++....+=...|+++++|+|||-|.... |=.
T Consensus 36 ~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~ 115 (339)
T 2zwn_A 36 LIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGV 115 (339)
T ss_dssp EEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTT
T ss_pred eEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhc
Confidence 45789999999988753 33321 1111 011100 0 012221111125778889999999997654 444
Q ss_pred CCCeEEEEecCC
Q 029725 113 SGMKLAVTVGSG 124 (189)
Q Consensus 113 ~GmKl~I~V~~~ 124 (189)
.||.-.+.|...
T Consensus 116 ~Gl~G~liV~p~ 127 (339)
T 2zwn_A 116 RGMWGPLIVDPK 127 (339)
T ss_dssp SCCEEEEEEECS
T ss_pred CCceEeEEecCC
Confidence 788888888754
No 63
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=53.56 E-value=11 Score=34.91 Aligned_cols=72 Identities=14% Similarity=0.222 Sum_probs=44.3
Q ss_pred eEEeCCEeEEEECCC---CeEEEE-cCCCCCCCCCCCCc-cccCCCceEEEecCCceEEEEcCCCCCCCCCC-eEEEEec
Q 029725 49 TFAVGDSLVFNYGSG---HTVDEV-SGSDYNSCTVGNAI-TSDSSGATTITLKTAGTHYFICGVPGHCGSGM-KLAVTVG 122 (189)
Q Consensus 49 tF~vGDtLvF~y~~~---hsV~~V-~~~~Y~~C~~s~pi-~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~Gm-Kl~I~V~ 122 (189)
-.+.|-.|+|.=-.. .-++.+ +..+...|...--. ..+.=| ....| ++|.|||..+...-|++|- |+.|.|+
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (491)
T 3l6w_A 414 VVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFELG-KMYSV-ESGDYFMTASTTELCNDNNLRIHVHVD 491 (491)
T ss_pred EeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCccccc-ceEec-CCCceEecCChHHHHhCCceeEEEEeC
Confidence 456777777754332 222333 55566678754311 112112 23334 5899999999999999997 9999884
No 64
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=51.07 E-value=7.5 Score=32.85 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=29.7
Q ss_pred eEEEecCCceEEEEcCCCCCC-CCCCeEEEEecCC
Q 029725 91 TTITLKTAGTHYFICGVPGHC-GSGMKLAVTVGSG 124 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~ 124 (189)
..++.+++|.|+|.|-.-.|+ ..||.-.++|...
T Consensus 285 v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~ 319 (333)
T 1mzy_A 285 ALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGE 319 (333)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTCCEEEEEEESC
T ss_pred EEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCC
Confidence 467788999999999998999 9999999999753
No 65
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=50.21 E-value=18 Score=32.96 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=48.8
Q ss_pred CCeEEeCCEeEEEECCC-----CeEEE--EcCC---CCCCCC-C-CCCccccCCCceEEEecCCceEEEEcCCCCCCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG-----HTVDE--VSGS---DYNSCT-V-GNAITSDSSGATTITLKTAGTHYFICGVPGHCGSG 114 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~-----hsV~~--V~~~---~Y~~C~-~-s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~G 114 (189)
..+++.||+|+.++.++ +++.. +.+. ..|.=. . ..+|....+=...|+++++|+|||=|-...+=..|
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~G 114 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAG 114 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGT
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhcc
Confidence 45789999999988764 23321 1111 011100 0 01222211112477888999999999988887889
Q ss_pred CeEEEEecCCC
Q 029725 115 MKLAVTVGSGS 125 (189)
Q Consensus 115 mKl~I~V~~~~ 125 (189)
|.-.+.|....
T Consensus 115 l~G~liV~~~~ 125 (552)
T 1aoz_A 115 LYGSLIVDPPQ 125 (552)
T ss_dssp CEEEEEEECCT
T ss_pred CeeeEEEeCCc
Confidence 99999998754
No 66
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=47.11 E-value=10 Score=26.95 Aligned_cols=19 Identities=21% Similarity=0.357 Sum_probs=16.2
Q ss_pred CCCCeEEeCCEeEEEECCC
Q 029725 45 TSGKTFAVGDSLVFNYGSG 63 (189)
Q Consensus 45 as~~tF~vGDtLvF~y~~~ 63 (189)
+..+.++.||.|+|+|...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 4567889999999999876
No 67
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=46.90 E-value=18 Score=33.62 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=28.8
Q ss_pred eEEEecCCceEEEEcCCCCCCCCCCeEEEEecCC
Q 029725 91 TTITLKTAGTHYFICGVPGHCGSGMKLAVTVGSG 124 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~~~ 124 (189)
..|+++++|+|||=|-...|=..|+.-.|.|...
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 5788889999999999887777899888888754
No 68
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=46.77 E-value=7.4 Score=32.42 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=28.7
Q ss_pred eEEEecCCceEEEEcCCCCCCCCCCeEEEEecC
Q 029725 91 TTITLKTAGTHYFICGVPGHCGSGMKLAVTVGS 123 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~~ 123 (189)
..++.+.||.|.|.|-+..|=+.||.-.++|.+
T Consensus 256 v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 256 LELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 456677999999999999999999999998863
No 69
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=44.75 E-value=10 Score=32.10 Aligned_cols=78 Identities=22% Similarity=0.231 Sum_probs=0.0
Q ss_pred eEEeCCEeEEEECC--------C-CeEEEEc--CCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCC---CCC
Q 029725 49 TFAVGDSLVFNYGS--------G-HTVDEVS--GSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHC---GSG 114 (189)
Q Consensus 49 tF~vGDtLvF~y~~--------~-hsV~~V~--~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC---~~G 114 (189)
+++.||+|++++.+ . |.+.+-. ..|--.=....++....+=...++++++|++||-|-...+= ..|
T Consensus 37 ~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~G 116 (318)
T 3g5w_A 37 HVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRG 116 (318)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSC
T ss_pred EEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCC
Q ss_pred CeEEEEecCCCC
Q 029725 115 MKLAVTVGSGSP 126 (189)
Q Consensus 115 mKl~I~V~~~~~ 126 (189)
|.-.+.|.....
T Consensus 117 l~G~lIV~~~~~ 128 (318)
T 3g5w_A 117 MWGPLIVEPKNP 128 (318)
T ss_dssp CEEEEEEECSSC
T ss_pred CEEEEEEcCCCc
No 70
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=42.98 E-value=2.9 Score=35.30 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=31.9
Q ss_pred CCeEEeCCEeEEEECCC--C-eEEEE--cCCCCCC--CCCCCCccccCCC--ceEEEecCCceEEEEcCCCCCCCCCCeE
Q 029725 47 GKTFAVGDSLVFNYGSG--H-TVDEV--SGSDYNS--CTVGNAITSDSSG--ATTITLKTAGTHYFICGVPGHCGSGMKL 117 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~--h-sV~~V--~~~~Y~~--C~~s~pi~~~s~G--~~~v~L~~~G~~YFiC~v~~HC~~GmKl 117 (189)
..+++.||+++|..-+. . ....+ ....++. - ..+.+...... ...++.+++|.++|-|-+..|-..||..
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~dG~-~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~ 294 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQNHH-KISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 294 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEETTE-ECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeeeCCE-EcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeE
Confidence 35677899888887653 1 23222 1111110 0 01111111222 3467778899999999999999999998
Q ss_pred EEEecC
Q 029725 118 AVTVGS 123 (189)
Q Consensus 118 ~I~V~~ 123 (189)
.++|..
T Consensus 295 ~~~V~~ 300 (306)
T 1sdd_A 295 YIDIKN 300 (306)
T ss_dssp CC----
T ss_pred EEEEec
Confidence 888874
No 71
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=40.24 E-value=21 Score=32.61 Aligned_cols=78 Identities=10% Similarity=0.151 Sum_probs=47.4
Q ss_pred CCeEEeCCEeEEEECCC-----CeEEE--EcC---CCCCCC-CC-CCCccc-cCCCceEEEecCCceEEEEcCCCCCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG-----HTVDE--VSG---SDYNSC-TV-GNAITS-DSSGATTITLKTAGTHYFICGVPGHCGS 113 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~-----hsV~~--V~~---~~Y~~C-~~-s~pi~~-~s~G~~~v~L~~~G~~YFiC~v~~HC~~ 113 (189)
..+++.||+|+.++.++ +++.. +.. ...|.= .. ..+|.. ..+=...|+++++|+|||=|-...|=..
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~ 147 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGN 147 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcC
Confidence 35778999999988652 34422 111 111110 00 012221 1111247888899999999998888788
Q ss_pred CCeEEEEecCC
Q 029725 114 GMKLAVTVGSG 124 (189)
Q Consensus 114 GmKl~I~V~~~ 124 (189)
||.-.+.|...
T Consensus 148 Gl~G~liV~~~ 158 (559)
T 2q9o_A 148 GVVGTIQINGP 158 (559)
T ss_dssp TCEEEEEEECC
T ss_pred CceEEEEecCC
Confidence 99999888854
No 72
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=39.34 E-value=29 Score=31.58 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=48.6
Q ss_pred CCeEEeCCEeEEEECCC-C----eEEE--EcC---CCCCC-CCC-CCCccccCCCceEEEec-CCceEEEEcCCCCCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG-H----TVDE--VSG---SDYNS-CTV-GNAITSDSSGATTITLK-TAGTHYFICGVPGHCGS 113 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~-h----sV~~--V~~---~~Y~~-C~~-s~pi~~~s~G~~~v~L~-~~G~~YFiC~v~~HC~~ 113 (189)
..+++.||+|+.++.++ . ++.. +.+ ...|. -.. ..+|....+=...|+++ ++|+|||=|-...|=..
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~ 114 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYED 114 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccC
Confidence 45889999999999774 2 2321 111 01111 000 01222211112467777 89999999998888788
Q ss_pred CCeEEEEecCCC
Q 029725 114 GMKLAVTVGSGS 125 (189)
Q Consensus 114 GmKl~I~V~~~~ 125 (189)
||.-.+.|....
T Consensus 115 Gl~G~liV~~~~ 126 (534)
T 1zpu_A 115 GMKGLFIIKDDS 126 (534)
T ss_dssp TCEEEEEEECTT
T ss_pred cceeeEEeCCCC
Confidence 999999998653
No 73
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=38.79 E-value=14 Score=36.73 Aligned_cols=75 Identities=27% Similarity=0.285 Sum_probs=51.7
Q ss_pred CCeEEeCCEeEEEECC-----C-CeEEEEc------CCCCCCCCCCCCccccCCCceEEEecCCceEEEEcCCCCCCCCC
Q 029725 47 GKTFAVGDSLVFNYGS-----G-HTVDEVS------GSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSG 114 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~-----~-hsV~~V~------~~~Y~~C~~s~pi~~~s~G~~~v~L~~~G~~YFiC~v~~HC~~G 114 (189)
..++..||.|+.+..+ . |++.+-. ...++.|... ...+-...++.+.+|++++-|-+..|=..|
T Consensus 633 ~l~~~~gd~v~~~v~~~g~~~~~Hgl~~~g~t~~~dG~~~~t~~i~----pg~~~t~~~~~~~~Gt~~~h~h~~~~~~~G 708 (1065)
T 2j5w_A 633 GLTMCKGDSVVWYLFSAGNEADVHGIYFSGNTYLWRGERRDTANLF----PQTSLTLHMWPDTEGTFNVECLTTDHYTGG 708 (1065)
T ss_dssp CCEEETTCCEEEEEECCCSTTCCEEEEETTCCEEETTEEESEEEEC----TTCEEEEEECCCSCEEEEEEECSHHHHHTT
T ss_pred ceEEeCCCEEEEEEEcCCCcceEEeeEEeCCceeecCeecceEeec----CCceEEEEEecCCCeEEEEecCCCcccCCC
Confidence 5789999999888754 2 6665422 2223445422 222223567777999999999999999999
Q ss_pred CeEEEEecCCC
Q 029725 115 MKLAVTVGSGS 125 (189)
Q Consensus 115 mKl~I~V~~~~ 125 (189)
|+..+.|....
T Consensus 709 m~g~~~V~~~~ 719 (1065)
T 2j5w_A 709 MKQKYTVNQCR 719 (1065)
T ss_dssp CEEEEEEECCS
T ss_pred cEEEEEEcCCc
Confidence 99999987643
No 74
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=38.78 E-value=12 Score=26.61 Aligned_cols=15 Identities=40% Similarity=0.846 Sum_probs=11.7
Q ss_pred CeEEeCCEeEEE-ECC
Q 029725 48 KTFAVGDSLVFN-YGS 62 (189)
Q Consensus 48 ~tF~vGDtLvF~-y~~ 62 (189)
..|++||.|+|. |.+
T Consensus 36 r~~~vGD~l~l~E~~~ 51 (83)
T 3iuw_A 36 RNFQVGDILILEEYMN 51 (83)
T ss_dssp SCCCTTCEEEEEEEET
T ss_pred cCCCCCCEEEEEEccC
Confidence 359999999995 643
No 75
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=37.12 E-value=30 Score=31.31 Aligned_cols=79 Identities=13% Similarity=0.025 Sum_probs=47.1
Q ss_pred CCeEEeCCEeEEEECCC-C--------eEEE--EcC---CCCCCCC--CCCCccccCCCceEEEe-cCCceEEEEcCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG-H--------TVDE--VSG---SDYNSCT--VGNAITSDSSGATTITL-KTAGTHYFICGVPG 109 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~-h--------sV~~--V~~---~~Y~~C~--~s~pi~~~s~G~~~v~L-~~~G~~YFiC~v~~ 109 (189)
..+++.||+|+.++.++ . ++.. +.+ ...|.=. ...+|....+=...|++ +++|+|||=|-...
T Consensus 36 ~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~ 115 (495)
T 3t6v_A 36 VIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTT 115 (495)
T ss_dssp EEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTT
T ss_pred eEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchh
Confidence 35789999999998664 2 2321 111 1111100 00122221111246777 67999999999887
Q ss_pred CCCCCCeEEEEecCCC
Q 029725 110 HCGSGMKLAVTVGSGS 125 (189)
Q Consensus 110 HC~~GmKl~I~V~~~~ 125 (189)
|=..|+.-.+.|....
T Consensus 116 q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 116 QYCDGLRGPFVVYDPN 131 (495)
T ss_dssp GGGGTCEEEEEEECTT
T ss_pred HHhcCceEEEEEcCcc
Confidence 7778999999887543
No 76
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=35.92 E-value=21 Score=30.21 Aligned_cols=34 Identities=9% Similarity=0.041 Sum_probs=28.5
Q ss_pred eEEEecCCceEEEEcCCCCCC-CCCCeEEEEecCC
Q 029725 91 TTITLKTAGTHYFICGVPGHC-GSGMKLAVTVGSG 124 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~ 124 (189)
..|+.+++|.|+|.|-...|| ..||.-.+++...
T Consensus 274 v~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 274 VEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGA 308 (327)
T ss_dssp EEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESC
T ss_pred EEEEeCCCeEEEEEeccccccccCCcEEEEEECCC
Confidence 467778899999999999998 7899888888753
No 77
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=35.49 E-value=33 Score=31.10 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=47.0
Q ss_pred CCeEEeCCEeEEEECCC-C--------eEEE--EcC---CCCCCCC--CCCCccccCCCceEEEe-cCCceEEEEcCCCC
Q 029725 47 GKTFAVGDSLVFNYGSG-H--------TVDE--VSG---SDYNSCT--VGNAITSDSSGATTITL-KTAGTHYFICGVPG 109 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~-h--------sV~~--V~~---~~Y~~C~--~s~pi~~~s~G~~~v~L-~~~G~~YFiC~v~~ 109 (189)
..+++.||+|+.++.++ . ++.- +.+ ...|.=. ...+|....+=...|++ +++|+|||=|-...
T Consensus 35 ~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~ 114 (499)
T 3pxl_A 35 LVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLST 114 (499)
T ss_dssp CEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTT
T ss_pred eEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchh
Confidence 45789999999998664 2 2321 111 0111100 00122221111246777 67999999999887
Q ss_pred CCCCCCeEEEEecCCC
Q 029725 110 HCGSGMKLAVTVGSGS 125 (189)
Q Consensus 110 HC~~GmKl~I~V~~~~ 125 (189)
|=..|+.-.+.|....
T Consensus 115 q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 115 QYCDGLRGPFVVYDPN 130 (499)
T ss_dssp GGGGTCEEEEEEECTT
T ss_pred HHhccceeEEEEcCCc
Confidence 7778999999887543
No 78
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=35.32 E-value=58 Score=27.23 Aligned_cols=77 Identities=18% Similarity=0.186 Sum_probs=0.0
Q ss_pred eEEeCCEeEEEECCC---------CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCC-------------ceEEEEcC
Q 029725 49 TFAVGDSLVFNYGSG---------HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTA-------------GTHYFICG 106 (189)
Q Consensus 49 tF~vGDtLvF~y~~~---------hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~-------------G~~YFiC~ 106 (189)
+.++||+|++++.+. |.+.+-...|=-. ....++....+=...++++.| |+|||-|-
T Consensus 45 ~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~dG~~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h 123 (313)
T 3tas_A 45 ELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTK-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDH 123 (313)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCST-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECS
T ss_pred EEECCCEEEEEEEECCCCCccEeecCCcCCccCCCCc-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeec
Q ss_pred CCCCCC------CCCeEEEEecCCCC
Q 029725 107 VPGHCG------SGMKLAVTVGSGSP 126 (189)
Q Consensus 107 v~~HC~------~GmKl~I~V~~~~~ 126 (189)
+.+.=+ .||.-.+.|.....
T Consensus 124 ~~~~~~~~~~~~~Gl~G~liV~~~~~ 149 (313)
T 3tas_A 124 VVGTEHGTGGIRNGLYGPVIVRRKGD 149 (313)
T ss_dssp SSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred CcccccchhhhhccccCceEeecccc
No 79
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=33.21 E-value=28 Score=30.88 Aligned_cols=74 Identities=14% Similarity=0.176 Sum_probs=45.7
Q ss_pred CeEEeCCEeEEEECCC----CeEEE----EcC--CCCCCCCCCCCccccCCCceEEEecC-CceEEEEcCC----CCCCC
Q 029725 48 KTFAVGDSLVFNYGSG----HTVDE----VSG--SDYNSCTVGNAITSDSSGATTITLKT-AGTHYFICGV----PGHCG 112 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~----hsV~~----V~~--~~Y~~C~~s~pi~~~s~G~~~v~L~~-~G~~YFiC~v----~~HC~ 112 (189)
.+++.||+|++++.++ +++.. +.. ++...|. +....+=...|++++ +|+|||=|-. ..|=.
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~----i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~ 127 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARM----MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVY 127 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGGC----BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHH
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCCCCcCc----CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHh
Confidence 3678999999999764 44422 211 1111232 221111125788886 9999999987 33556
Q ss_pred CCCeEEEEecCCC
Q 029725 113 SGMKLAVTVGSGS 125 (189)
Q Consensus 113 ~GmKl~I~V~~~~ 125 (189)
.||--.+.|....
T Consensus 128 ~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 128 NGLAGMWLVEDEV 140 (451)
T ss_dssp TTCEEEEEEECHH
T ss_pred hcceEEEEEecCc
Confidence 8999888888643
No 80
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=31.88 E-value=26 Score=26.75 Aligned_cols=25 Identities=28% Similarity=0.243 Sum_probs=18.8
Q ss_pred CCCCeEEeCCEeEEEECCC-CeEEEE
Q 029725 45 TSGKTFAVGDSLVFNYGSG-HTVDEV 69 (189)
Q Consensus 45 as~~tF~vGDtLvF~y~~~-hsV~~V 69 (189)
+..+.+++||.++|.+... .-+++|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 4567889999999999875 335554
No 81
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=31.81 E-value=15 Score=25.35 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=15.4
Q ss_pred cCCCCeEEeCCEeEEEECCC
Q 029725 44 WTSGKTFAVGDSLVFNYGSG 63 (189)
Q Consensus 44 Was~~tF~vGDtLvF~y~~~ 63 (189)
-+.-..+++||.|.|.+...
T Consensus 48 ~~~l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 48 QTKMSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp TCEECCCCTTCEEEEEEEEE
T ss_pred hhhhhcCCCCCEEEEEEEEe
Confidence 33345799999999999754
No 82
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=31.73 E-value=15 Score=25.85 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=16.8
Q ss_pred cccCCCCeEEeCCEeEEEECCC
Q 029725 42 STWTSGKTFAVGDSLVFNYGSG 63 (189)
Q Consensus 42 ~~Was~~tF~vGDtLvF~y~~~ 63 (189)
.+.+.-..+++||.|.|.+...
T Consensus 54 ~~~~~l~~lk~Gd~V~F~~~~~ 75 (88)
T 2vb2_X 54 TPQTKMSEIKTGDKVAFNFVQQ 75 (88)
T ss_dssp CTTCEECCCCTTCEEEEEEEEE
T ss_pred CChhhhhcCCCCCEEEEEEEEe
Confidence 3444456899999999999754
No 83
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=31.04 E-value=44 Score=27.83 Aligned_cols=77 Identities=13% Similarity=0.096 Sum_probs=43.0
Q ss_pred CeEEeCCEeEEEECCC----CeEEE----EcCCCCCC-CCCC---------CCccccCCCceEEEecCC----------c
Q 029725 48 KTFAVGDSLVFNYGSG----HTVDE----VSGSDYNS-CTVG---------NAITSDSSGATTITLKTA----------G 99 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~----hsV~~----V~~~~Y~~-C~~s---------~pi~~~s~G~~~v~L~~~----------G 99 (189)
.+++.||+|++++.+. +++.. ++.+ .|. .-.. .++....+=...|++++. |
T Consensus 62 I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~-~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~G 140 (306)
T 1sdd_A 62 LYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF-SEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDDPPCL 140 (306)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEEESSCCCTT-TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSSCSEE
T ss_pred EEEeCCCEEEEEEEECCCCcccEeecceecccc-cCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCCCCce
Confidence 4789999999998763 34422 2211 111 1111 112111111246666554 7
Q ss_pred eEEEEcCCCC--CCCCCCeEEEEecCCC
Q 029725 100 THYFICGVPG--HCGSGMKLAVTVGSGS 125 (189)
Q Consensus 100 ~~YFiC~v~~--HC~~GmKl~I~V~~~~ 125 (189)
+|||-|-... |-..||.-.+.|....
T Consensus 141 T~wYHsH~~~~~q~~~GL~G~liV~~~~ 168 (306)
T 1sdd_A 141 THIYYSYVNLVEDFNSGLIGPLLICKKG 168 (306)
T ss_dssp EEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred EEEEeccCCchhhhccCceEEEEEccCC
Confidence 9999997654 4467888888887543
No 84
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=28.64 E-value=52 Score=27.59 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=27.7
Q ss_pred eEEEecCCceEEEEcCCCC-CCCCCCeEEEEecCCC
Q 029725 91 TTITLKTAGTHYFICGVPG-HCGSGMKLAVTVGSGS 125 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~-HC~~GmKl~I~V~~~~ 125 (189)
..|+.+++|.|+|.|..-. |=..||.-.++|....
T Consensus 291 v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 291 AFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEW 326 (340)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCC
T ss_pred EEEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCC
Confidence 3577788999999998763 5578999888887543
No 85
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=27.74 E-value=25 Score=33.74 Aligned_cols=76 Identities=9% Similarity=0.062 Sum_probs=44.3
Q ss_pred CeEEeCCEeEEEECCC----CeEE----EEcCCCCCCCC-CCCCccccCCCc--eEEEec----------CCceEEEEcC
Q 029725 48 KTFAVGDSLVFNYGSG----HTVD----EVSGSDYNSCT-VGNAITSDSSGA--TTITLK----------TAGTHYFICG 106 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~----hsV~----~V~~~~Y~~C~-~s~pi~~~s~G~--~~v~L~----------~~G~~YFiC~ 106 (189)
.++++||+|+.++.+. +++. .+.....|.=. ...+|.. ++. ..|++. .+|++||-|.
T Consensus 201 Ir~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~~dG~~~~~~~I~P--G~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh 278 (770)
T 2r7e_B 201 IRAEVEDNIMVTFRNQASRPYSFYSSLISYEEDQRQGAEPRKNFVKP--NETKTYFWKVQHHMAPTKDEFDCKAWAYSSD 278 (770)
T ss_dssp CCCCSSSCEEEEEECCSSSCCCCCBTTCCCCCCSSSCTTTTSSCCCS--SCEEEEECCCCSSSSCCSSCCSEEEEEECCC
T ss_pred EEEEcCCEEEEEEEECCCCCcceeecccccccccCCCCcCccCccCC--CCeEEEEEEecCccCCccCCCCCeeEEeecc
Confidence 4678999999998763 3331 12211111100 1112221 222 345555 6799999998
Q ss_pred CCC--CCCCCCeEEEEecCCC
Q 029725 107 VPG--HCGSGMKLAVTVGSGS 125 (189)
Q Consensus 107 v~~--HC~~GmKl~I~V~~~~ 125 (189)
+.. |...||.-.+.|....
T Consensus 279 ~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 279 VDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp SSSSHHHHTSCCEEEEEECST
T ss_pred CCcHHHHhCCceeeEEECCCc
Confidence 875 6778999888888654
No 86
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=27.44 E-value=39 Score=29.42 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=28.8
Q ss_pred eEEEecCCceEEEEcCCCCCC-CCCCeEEEEecCCC
Q 029725 91 TTITLKTAGTHYFICGVPGHC-GSGMKLAVTVGSGS 125 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~~ 125 (189)
..++.+++|.|+|.|....|+ ..||...++|....
T Consensus 264 v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 264 VEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp EEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred EEEEcCCCCeEEEEecccccccccCceEEEEecCCC
Confidence 367788999999999988887 78998888887544
No 87
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=27.02 E-value=13 Score=27.69 Aligned_cols=12 Identities=42% Similarity=0.830 Sum_probs=10.0
Q ss_pred CeEEeCCEeEEE
Q 029725 48 KTFAVGDSLVFN 59 (189)
Q Consensus 48 ~tF~vGDtLvF~ 59 (189)
+.+++||.|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 367999999993
No 88
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=26.70 E-value=0.82 Score=25.59 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=13.2
Q ss_pred CCeEEeCCEeEEEECCC
Q 029725 47 GKTFAVGDSLVFNYGSG 63 (189)
Q Consensus 47 ~~tF~vGDtLvF~y~~~ 63 (189)
.|.|.+.|.|.|.|...
T Consensus 4 skpfnvddvlkftftge 20 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGE 20 (27)
T ss_dssp --CCCHHHHHHHHHHCC
T ss_pred CCCcChhheEEEEeccc
Confidence 47899999999999874
No 89
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=25.51 E-value=34 Score=31.66 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=29.0
Q ss_pred eEEEecCCceEEEEcCCCCCCCCCCeEEEEecC
Q 029725 91 TTITLKTAGTHYFICGVPGHCGSGMKLAVTVGS 123 (189)
Q Consensus 91 ~~v~L~~~G~~YFiC~v~~HC~~GmKl~I~V~~ 123 (189)
..|+.+++|.+.|-|-+..|-..||...+.|..
T Consensus 295 v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 295 LEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred EEEEeccceEeecccCcccccccccccceeeec
Confidence 356778899999999999999999999999964
No 90
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=24.74 E-value=18 Score=27.66 Aligned_cols=12 Identities=50% Similarity=1.129 Sum_probs=5.4
Q ss_pred eEEeCCEeEEEE
Q 029725 49 TFAVGDSLVFNY 60 (189)
Q Consensus 49 tF~vGDtLvF~y 60 (189)
++..||++.|+|
T Consensus 101 tl~rG~t~~F~y 112 (126)
T 4dny_A 101 TLSVGNTLLFKY 112 (126)
T ss_dssp EECTTCEEEEEE
T ss_pred EecCCCEEEEEE
Confidence 334444444444
No 91
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=24.37 E-value=1e+02 Score=26.87 Aligned_cols=75 Identities=17% Similarity=0.128 Sum_probs=0.0
Q ss_pred eEEeCCEeEEEECCC--CeEEEEcCCCCCCCCCCCCccccCCCc---eEEEe--cCCceEEEEcCCCC----CCCCCCeE
Q 029725 49 TFAVGDSLVFNYGSG--HTVDEVSGSDYNSCTVGNAITSDSSGA---TTITL--KTAGTHYFICGVPG----HCGSGMKL 117 (189)
Q Consensus 49 tF~vGDtLvF~y~~~--hsV~~V~~~~Y~~C~~s~pi~~~s~G~---~~v~L--~~~G~~YFiC~v~~----HC~~GmKl 117 (189)
+++.||+|+.++.++ +....=-..-...-...++.....-|. ..|++ +++|+|||-|-..+ |=..||.-
T Consensus 50 ~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G 129 (439)
T 2xu9_A 50 RVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLG 129 (439)
T ss_dssp EECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSCTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCE
T ss_pred EEeCCCEEEEEEEECCCCCcceEeCCCCCCccccCCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeE
Q ss_pred EEEecC
Q 029725 118 AVTVGS 123 (189)
Q Consensus 118 ~I~V~~ 123 (189)
.+.|..
T Consensus 130 ~liV~~ 135 (439)
T 2xu9_A 130 ALVVES 135 (439)
T ss_dssp EEEECC
T ss_pred EEEEcC
No 92
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=24.19 E-value=1.5e+02 Score=24.46 Aligned_cols=77 Identities=21% Similarity=0.151 Sum_probs=0.0
Q ss_pred eEEeCCEeEEEECCC---------CeEEEEcCCCCCCCCCCCCccccCCCceEEEecCC-------------ceEEEEcC
Q 029725 49 TFAVGDSLVFNYGSG---------HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTA-------------GTHYFICG 106 (189)
Q Consensus 49 tF~vGDtLvF~y~~~---------hsV~~V~~~~Y~~C~~s~pi~~~s~G~~~v~L~~~-------------G~~YFiC~ 106 (189)
+.++||+|++++.+. |.+..-...|=-. -...++....+-...+++..+ |+|||-|-
T Consensus 61 ~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~~DG~~-~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H 139 (299)
T 3t9w_A 61 EMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVNSDGTL-MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDH 139 (299)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCT-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECS
T ss_pred EEECCeEEEEEEEECCCCCccEEeCCcccCCccCCCc-cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecC
Q ss_pred CCCCCCC------CCeEEEEecCCCC
Q 029725 107 VPGHCGS------GMKLAVTVGSGSP 126 (189)
Q Consensus 107 v~~HC~~------GmKl~I~V~~~~~ 126 (189)
..+.=.. ||.-.+.|.....
T Consensus 140 ~~~~~~~~~~~~~GL~G~liV~~~~~ 165 (299)
T 3t9w_A 140 AMGTEHGTEGVLKGLYGALVVRRQGD 165 (299)
T ss_dssp SSSSTTCHHHHHHTCEEEEEEECTTC
T ss_pred CcccccchhhhcccccceEEEecccc
No 93
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=24.13 E-value=69 Score=22.06 Aligned_cols=22 Identities=14% Similarity=0.262 Sum_probs=17.3
Q ss_pred cccCCCCeEEeCCEeEEEECCC
Q 029725 42 STWTSGKTFAVGDSLVFNYGSG 63 (189)
Q Consensus 42 ~~Was~~tF~vGDtLvF~y~~~ 63 (189)
.+.+.-..+++||.|.|.+...
T Consensus 40 ~~~~~l~~lk~Gd~V~F~~~~~ 61 (82)
T 2l55_A 40 PPAGLPQGLKAGDRVAFSFRLD 61 (82)
T ss_dssp CTTCCCSSCSTTCEEEEEEEEE
T ss_pred CChhHhhcCCCCCEEEEEEEEC
Confidence 4455567899999999999764
No 94
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=22.85 E-value=24 Score=25.97 Aligned_cols=11 Identities=27% Similarity=0.724 Sum_probs=9.8
Q ss_pred CeEEeCCEeEE
Q 029725 48 KTFAVGDSLVF 58 (189)
Q Consensus 48 ~tF~vGDtLvF 58 (189)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 95
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=22.76 E-value=62 Score=26.49 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=43.2
Q ss_pred CeEEeCCEeEEEECCC----CeEEE--EcC-CCCCCCCC-CCCccccCCCceEEEecC-------------CceEEEEcC
Q 029725 48 KTFAVGDSLVFNYGSG----HTVDE--VSG-SDYNSCTV-GNAITSDSSGATTITLKT-------------AGTHYFICG 106 (189)
Q Consensus 48 ~tF~vGDtLvF~y~~~----hsV~~--V~~-~~Y~~C~~-s~pi~~~s~G~~~v~L~~-------------~G~~YFiC~ 106 (189)
.+++.||+|++++.+. ++|.. +.. ...|.-.. ..++....+-...+++++ .|++||-|-
T Consensus 38 i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~~DG~~~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h 117 (276)
T 3kw8_A 38 IEVNEGDTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMNKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDH 117 (276)
T ss_dssp EEEETTCEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTTTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECS
T ss_pred EEEECCCEEEEEEEECCCCCccEeecCcccCCccCCCcCCcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecC
Confidence 4679999999998763 33422 111 11111111 112222111124666654 478889998
Q ss_pred CCC------CCCCCCeEEEEecCCC
Q 029725 107 VPG------HCGSGMKLAVTVGSGS 125 (189)
Q Consensus 107 v~~------HC~~GmKl~I~V~~~~ 125 (189)
..+ |=..||.-.+.|....
T Consensus 118 ~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 118 VVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp SSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred ccccccchhhhhCccEEEEEEecCC
Confidence 754 3456998888888654
No 96
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=22.61 E-value=56 Score=29.47 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=28.4
Q ss_pred eEEEe-cCCceEEEEcCCCCCCCCCCeEEEEecCCC
Q 029725 91 TTITL-KTAGTHYFICGVPGHCGSGMKLAVTVGSGS 125 (189)
Q Consensus 91 ~~v~L-~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~ 125 (189)
..|++ +++|+|||=|-...|=..||.-.+.|....
T Consensus 116 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 116 YDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPN 151 (521)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEecCCCCccEEEEeccCCchhcCceEEEEEcCCc
Confidence 46664 579999999998888888999999987643
No 97
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=21.58 E-value=42 Score=27.55 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=29.2
Q ss_pred EEEec---CCceEEEEcCCCCCCCCCCeEEEEecCCCC
Q 029725 92 TITLK---TAGTHYFICGVPGHCGSGMKLAVTVGSGSP 126 (189)
Q Consensus 92 ~v~L~---~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~ 126 (189)
.++.+ .+|.++|-|-+..|=..||...+.|.....
T Consensus 231 ~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 231 QIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred EEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 44554 599999999999999999999999987643
No 98
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=20.68 E-value=1.6e+02 Score=24.40 Aligned_cols=45 Identities=22% Similarity=0.397 Sum_probs=23.9
Q ss_pred eEEEECCC-CeEEEE-cCCCCCCCCCCCCccc--cCCCceEEEec-CCceEEE
Q 029725 56 LVFNYGSG-HTVDEV-SGSDYNSCTVGNAITS--DSSGATTITLK-TAGTHYF 103 (189)
Q Consensus 56 LvF~y~~~-hsV~~V-~~~~Y~~C~~s~pi~~--~s~G~~~v~L~-~~G~~YF 103 (189)
++|.|..+ ..|... +..+++.. -++.. ..+|.+.+++. .+|.|+|
T Consensus 6 v~f~W~~~a~~V~V~GsF~~W~~~---~~m~k~~~~~G~f~~tv~LppG~y~Y 55 (252)
T 2qlv_B 6 VEIRWQQGGSKVYVTGSFTKWRKM---IGLIPDSDNNGSFHVKLRLLPGTHRF 55 (252)
T ss_dssp EEEEECSCCSCEEEEEGGGTTSSC---EECEECSSSTTCEEEEEEECSEEEEE
T ss_pred EEEEEeCCCcEEEEEEEeCCCcCc---ccceeccCCCCcEEEEEECCCCEEEE
Confidence 57888877 777776 44444322 12222 23455544433 4687643
No 99
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=20.63 E-value=1.6e+02 Score=20.39 Aligned_cols=41 Identities=24% Similarity=0.317 Sum_probs=24.3
Q ss_pred eEEEECCC-CeEEEE-cCCCCCCCCCCCCccccCCCceEEEec-CCceE
Q 029725 56 LVFNYGSG-HTVDEV-SGSDYNSCTVGNAITSDSSGATTITLK-TAGTH 101 (189)
Q Consensus 56 LvF~y~~~-hsV~~V-~~~~Y~~C~~s~pi~~~s~G~~~v~L~-~~G~~ 101 (189)
+.|.|.++ ..|..+ +..+++ ..++.. .+|...+++. .+|.|
T Consensus 13 v~F~wap~a~~V~v~GdFn~W~----~~~m~~-~~g~w~~~v~l~~G~~ 56 (96)
T 1z0n_A 13 TVFRWTGGGKEVYLSGSFNNWS----KLPMTR-SQNNFVAILDLPEGEH 56 (96)
T ss_dssp EEEEECSCCSCEEEEEGGGTTC----CEECEE-ETTEEEEEEEECSEEE
T ss_pred EEEEECCCCcEEEEEEEeCCCc----cccCEE-CCCEEEEEEEccCCCE
Confidence 58999987 889887 666665 233333 2354433332 46853
No 100
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=20.23 E-value=58 Score=29.16 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=27.7
Q ss_pred eEEEe-cCCceEEEEcCCCCCCCCCCeEEEEecCCC
Q 029725 91 TTITL-KTAGTHYFICGVPGHCGSGMKLAVTVGSGS 125 (189)
Q Consensus 91 ~~v~L-~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~ 125 (189)
..|++ +++|+|||=|-...|=..||.-.+.|....
T Consensus 95 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~ 130 (503)
T 1hfu_A 95 YKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDN 130 (503)
T ss_dssp EEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCC
Confidence 35553 469999999998887778999999997643
Done!