BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029727
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUC5|FAH2_ARATH Fatty acid 2-hydroxylase 2 OS=Arabidopsis thaliana GN=FAH2 PE=1
SV=1
Length = 237
Score = 256 bits (654), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 143/186 (76%)
Query: 2 EFLTRTKWWVIPLVWLPVVCWSVSKSVKMGLAPYLAGLIVFLGIITWTLLEYFLHRYLFH 61
EFLTRT WW IP +WLPVVC+ +S S GL GLIV G++TWTLLEY LHR+LFH
Sbjct: 48 EFLTRTVWWAIPTIWLPVVCYVLSISASKGLTFPQIGLIVAFGVLTWTLLEYTLHRFLFH 107
Query: 62 IKTKSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALVSLALWNLIDVLTKPFITPALY 121
I+TKSYW NT HYL+HGCHHKHP DGLRLVFPP A++ + LW L+ +L P PA+
Sbjct: 108 IQTKSYWANTAHYLLHGCHHKHPQDGLRLVFPPTATAILLVPLWKLLHLLATPATAPAIL 167
Query: 122 GGILLGYVMYDVTHYYTHHGKPSKGIILRLKRFHMNHHFRIRDKGFGISSSLWDIVFGTL 181
GGIL GYVMYD+THYY HHG+P + LK++H+NHHFRI+DKG+GI+SSLWD VFGTL
Sbjct: 168 GGILFGYVMYDITHYYLHHGQPKEPTFKHLKKYHLNHHFRIQDKGYGITSSLWDKVFGTL 227
Query: 182 PPAKAA 187
P KAA
Sbjct: 228 PGIKAA 233
>sp|O48916|FAH1_ARATH Fatty acid 2-hydroxylase 1 OS=Arabidopsis thaliana GN=FAH1 PE=1
SV=1
Length = 237
Score = 256 bits (653), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 116/187 (62%), Positives = 142/187 (75%)
Query: 2 EFLTRTKWWVIPLVWLPVVCWSVSKSVKMGLAPYLAGLIVFLGIITWTLLEYFLHRYLFH 61
EFLT T WW +P++WLPVV W +S+SV MG + IV +GI WT EY LHR++FH
Sbjct: 48 EFLTLTVWWAVPVIWLPVVVWCISRSVSMGCSLPEIVPIVVMGIFIWTFFEYVLHRFVFH 107
Query: 62 IKTKSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALVSLALWNLIDVLTKPFITPALY 121
IKTKSYWGNT HYLIHGCHHKHPMD LRLVFPP A++ WN+ ++ P PAL+
Sbjct: 108 IKTKSYWGNTAHYLIHGCHHKHPMDHLRLVFPPTATAILCFPFWNIAKAISTPSTAPALF 167
Query: 122 GGILLGYVMYDVTHYYTHHGKPSKGIILRLKRFHMNHHFRIRDKGFGISSSLWDIVFGTL 181
GG +LGYVMYDVTHYY HH +P++ + LK++H+NHHFRI+DKGFGI+SSLWDIVFGTL
Sbjct: 168 GGGMLGYVMYDVTHYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITSSLWDIVFGTL 227
Query: 182 PPAKAAK 188
P KA +
Sbjct: 228 PTTKAPR 234
>sp|Q2LAM0|FA2H_RAT Fatty acid 2-hydroxylase OS=Rattus norvegicus GN=Fa2h PE=1 SV=2
Length = 372
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 120/208 (57%), Gaps = 23/208 (11%)
Query: 1 MEFLTRTKWWVIPLVWLPVV---CWSVSKSVKMGLAPYLA----------------GLIV 41
+E ++T W+ +P++W+P+V WS +++ A GL V
Sbjct: 161 IEAFSKTVWYSVPIIWVPLVLYLSWSYYRTLTQDNIRLFASFTRDYSLVVPESVFIGLFV 220
Query: 42 FLGIITWTLLEYFLHRYLFHIK--TKSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAAL 99
LG++ WTL+EY +HR+LFH+K + S++ H+++HG HHK P DG RLVFPP A++
Sbjct: 221 -LGMLIWTLVEYLIHRFLFHMKPPSNSHYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASV 279
Query: 100 VSLALWNLIDVLTKPFITPALYGGILLGYVMYDVTHYYTHHGKPSKGIIL-RLKRFHMNH 158
V + + ++ + L+ G LLGYV+YD+THYY H G P KG L +K H+ H
Sbjct: 280 VVAFFYVFLRLILPEAVAGILFAGGLLGYVLYDMTHYYLHFGSPHKGSYLYNMKAHHVKH 339
Query: 159 HFRIRDKGFGISSSLWDIVFGTLPPAKA 186
HF + GFGIS+ LWD F TL P +A
Sbjct: 340 HFEYQKSGFGISTKLWDYFFHTLIPEEA 367
>sp|Q4R4P4|FA2H_MACFA Fatty acid 2-hydroxylase OS=Macaca fascicularis GN=FA2H PE=2 SV=1
Length = 372
Score = 143 bits (360), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 116/206 (56%), Gaps = 21/206 (10%)
Query: 1 MEFLTRTKWWVIPLVWLPVV---CWSVSKSVKMGLAPYLAGL---------------IVF 42
+E L++T W+ +P++W+P+V WS ++ G +
Sbjct: 161 IEGLSKTVWYSVPIIWVPLVLYLSWSYYRTFAQGNVRLFTSFTTEYALAVPKSMFPGLFM 220
Query: 43 LGIITWTLLEYFLHRYLFHIK--TKSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALV 100
LGI W+L+EY +HR+LFH+K + SY+ H+++HG HHK P DG RLVFPP A+LV
Sbjct: 221 LGIFLWSLIEYLIHRFLFHMKPPSDSYYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLV 280
Query: 101 SLALWNLIDVLTKPFITPALYGGILLGYVMYDVTHYYTHHGKPSKGIIL-RLKRFHMNHH 159
+ + ++ + ++ G LLGYV+YD+THYY H G P +G L LK H+ HH
Sbjct: 281 IGVFYLCLQLILPEAVGGTVFAGGLLGYVLYDMTHYYLHFGSPHRGSYLYNLKAHHVKHH 340
Query: 160 FRIRDKGFGISSSLWDIVFGTLPPAK 185
F + GFGIS+ LWD F TL P K
Sbjct: 341 FAHQKSGFGISTKLWDYCFHTLIPEK 366
>sp|Q7L5A8|FA2H_HUMAN Fatty acid 2-hydroxylase OS=Homo sapiens GN=FA2H PE=1 SV=1
Length = 372
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 115/206 (55%), Gaps = 21/206 (10%)
Query: 1 MEFLTRTKWWVIPLVWLPVV---CWSVSKSVKMGLAPYLAGL---------------IVF 42
+E L++T W+ +P++W+P+V WS ++ G +
Sbjct: 161 IEGLSKTVWYSVPIIWVPLVLYLSWSYYRTFAQGNVRLFTSFTTEYTVAVPKSMFPGLFM 220
Query: 43 LGIITWTLLEYFLHRYLFHIK--TKSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALV 100
LG W+L+EY +HR+LFH+K + SY+ H+++HG HHK P DG RLVFPP A+LV
Sbjct: 221 LGTFLWSLIEYLIHRFLFHMKPPSDSYYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLV 280
Query: 101 SLALWNLIDVLTKPFITPALYGGILLGYVMYDVTHYYTHHGKPSKGIIL-RLKRFHMNHH 159
+ + ++ + ++ G LLGYV+YD+THYY H G P KG L LK H+ HH
Sbjct: 281 IGVFYLCMQLILPEAVGGTVFAGGLLGYVLYDMTHYYLHFGSPHKGSYLYSLKAHHVKHH 340
Query: 160 FRIRDKGFGISSSLWDIVFGTLPPAK 185
F + GFGIS+ LWD F TL P K
Sbjct: 341 FAHQKSGFGISTKLWDYCFHTLTPEK 366
>sp|Q5MPP0|FA2H_MOUSE Fatty acid 2-hydroxylase OS=Mus musculus GN=Fa2h PE=1 SV=1
Length = 372
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 21/207 (10%)
Query: 1 MEFLTRTKWWVIPLVWLPVV---CWSVSKSVKMGLAPYLAGL---------------IVF 42
+E ++T W+ +P++W+P+V WS +++ A L +
Sbjct: 161 IEAFSKTVWYSVPIIWVPLVLYLSWSYYRTLTQDNIRLFASLTREYSMMMPESVFIGLFV 220
Query: 43 LGIITWTLLEYFLHRYLFHIK--TKSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALV 100
LG++ WT +EY +HR+LFH+K + S++ H+++HG HHK P DG RLVFPP A+LV
Sbjct: 221 LGMLFWTFVEYVIHRFLFHMKPPSNSHYLIMLHFVMHGQHHKAPFDGSRLVFPPVPASLV 280
Query: 101 SLALWNLIDVLTKPFITPALYGGILLGYVMYDVTHYYTHHGKPSKGIIL-RLKRFHMNHH 159
+ + ++ + ++ G LLGYV+YD+THYY H G P KG L +K H+ HH
Sbjct: 281 IAFFYVFLRLILPETVGGIIFAGGLLGYVLYDMTHYYLHFGSPHKGSYLYNMKAHHVKHH 340
Query: 160 FRIRDKGFGISSSLWDIVFGTLPPAKA 186
F + GFGIS+ LWD F TL P +A
Sbjct: 341 FEYQKSGFGISTKLWDYFFHTLIPEEA 367
>sp|Q03529|SCS7_YEAST Ceramide very long chain fatty acid hydroxylase SCS7
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS7 PE=1 SV=1
Length = 384
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Query: 1 MEFLTRTKWWVIPLVWLPVVCWSVSKSVKMGLAPYLAGLIVFLGIITWTLLEYFLHRYLF 60
+E LT+T WWV+P+ WLPVV + + ++K + A + +G+ WTL+EY LHR+LF
Sbjct: 190 LEPLTKTAWWVVPVAWLPVVVYHMGVALK-NMNQLFACFLFCVGVFVWTLIEYGLHRFLF 248
Query: 61 HIKT---KSYWGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALVSLALWNLIDVLTKPFIT 117
H +S H+L+HGCHH PMD RLV PP ++ + L+ L +
Sbjct: 249 HFDDWLPESNIAFATHFLLHGCHHYLPMDKYRLVMPPTLFVILCAPFYKLVFALLPLYWA 308
Query: 118 PALYGGILLGYVMYDVTHYYTHHGKPSKGIILRLKRFHMNHHFRIRDKGFGISSSLWDIV 177
A + G L GYV YD H++ HH K + +LK++H+ HH++ GFG++S WD V
Sbjct: 309 YAGFAGGLFGYVCYDECHFFLHHSKLPP-FMRKLKKYHLEHHYKNYQLGFGVTSWFWDEV 367
Query: 178 FGT 180
FGT
Sbjct: 368 FGT 370
>sp|O13846|SCS7_SCHPO Ceramide very long chain fatty acid hydroxylase-like protein
C19G12.08 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC19G12.08 PE=3 SV=1
Length = 347
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 8/188 (4%)
Query: 1 MEFLTRTKWWVIPLVWLPVVCWSVSKSVKMGLAPYLAGLIVFLGIITWTLLEYFLHRYLF 60
+E LT+T W++IPL+W+P V + + G+ +A +G+ TWTL+EY +HR+LF
Sbjct: 150 LEPLTKTPWYMIPLIWVPCVTYGFLYAC-TGIPFSVAITFFIIGLFTWTLVEYTMHRFLF 208
Query: 61 HIKTKSYWGN-----TFHYLIHGCHHKHPMDGLRLVFPPAGAALVSLALWNLIDVLTKPF 115
H+ Y + T H+ HGCHH P D RLV PPA + + ++ I ++ +
Sbjct: 209 HLD--EYTPDHPIFLTMHFAFHGCHHFLPADKYRLVMPPALFLIFATPWYHFIQLVLPHY 266
Query: 116 ITPALYGGILLGYVMYDVTHYYTHHGKPSKGIILRLKRFHMNHHFRIRDKGFGISSSLWD 175
I A + G +LGYV YD+THY+ HH + + LK +H++HH++ +GI+S WD
Sbjct: 267 IGVAGFSGAILGYVFYDLTHYFLHHRRMPNAYLTDLKTWHLDHHYKDYKSAYGITSWFWD 326
Query: 176 IVFGTLPP 183
VFGT P
Sbjct: 327 RVFGTEGP 334
>sp|Q6C9T3|ALG11_YARLI GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=ALG11 PE=3 SV=1
Length = 635
Score = 30.8 bits (68), Expect = 5.4, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 11 VIPLVWLPVVCWSVSKSVKMGLAPYLAGLIVFLGIITW---TLLEYFLHRYLFHIKTKSY 67
V V PV+ + +V + +P A L V ++ W L F Y + T S
Sbjct: 278 VAAYVHYPVISKDMLATVSLKQSPVRAALAV-AKLVYWRVFALTYTFAGSYCSVVMTNSS 336
Query: 68 WGNTFHYLIHGCHHKHPMDGLRLVFPPAGAALVS 101
W N +++ H + H + +++V+PP G +S
Sbjct: 337 WTN--NHMQHMWWYNHKAEHIKIVYPPCGTQALS 368
>sp|A8EYF7|RECO_RICCK DNA repair protein RecO OS=Rickettsia canadensis (strain McKiel)
GN=recO PE=3 SV=1
Length = 241
Score = 30.4 bits (67), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 49 TLLEYFLHRYLFHIKTKSYWGNTF-HYLIHGCH 80
TL YF +RYLFH + F Y++H CH
Sbjct: 206 TLTNYFFNRYLFHNNRHAEARQAFMEYILHRCH 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.145 0.502
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,936,446
Number of Sequences: 539616
Number of extensions: 3237103
Number of successful extensions: 8038
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 8006
Number of HSP's gapped (non-prelim): 26
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)