BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029729
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAS5|VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis
thaliana GN=VAMP726 PE=3 SV=2
Length = 220
Score = 266 bits (680), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 127/182 (69%), Positives = 148/182 (81%), Gaps = 2/182 (1%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M Q+SLIY+FVARG V+LAEYTEF GNF S+A QCLQKLP+SNNKFTYNCD HTFNYL D
Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVV ES+GRQIPMAFLERVK++F +YGGGKA+TA AN LNKEFG KLKE MQY
Sbjct: 61 NGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRLSYWSIRLRTFISRHKTFGVRG 178
C DHPEEISKL+KVKAQV+EVKGVMMENIEK+ G+++ + S+ + F +G
Sbjct: 121 CADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQG 180
Query: 179 PK 180
K
Sbjct: 181 TK 182
>sp|P47192|VA722_ARATH Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana
GN=VAMP722 PE=2 SV=2
Length = 221
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/182 (69%), Positives = 151/182 (82%), Gaps = 2/182 (1%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVVA +S+GRQIPMAFLERVK++F +YGGGKAATA AN LNKEFG KLKE MQY
Sbjct: 61 NGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRLSYWSIRLRTFISRHKTFGVRG 178
C+DHP+EISKLAKVKAQVSEVKGVMMENIEK+ G+++ + S+ + F +G
Sbjct: 121 CMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQG 180
Query: 179 PK 180
+
Sbjct: 181 TQ 182
>sp|Q9ZTW3|VA721_ARATH Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana
GN=VAMP721 PE=1 SV=1
Length = 219
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/182 (68%), Positives = 150/182 (82%), Gaps = 2/182 (1%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SLIY+FVARG V+L E+T+F GNF SIA QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
+G+TYCVVA +S+GRQIPM+FLERVK++F +YGGGKAATA AN LNKEFG KLKE MQY
Sbjct: 61 DGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRLSYWSIRLRTFISRHKTFGVRG 178
C+DHP+EISKLAKVKAQVSEVKGVMMENIEK+ G+++ + S+ + F G
Sbjct: 121 CMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTG 180
Query: 179 PK 180
+
Sbjct: 181 TQ 182
>sp|O48850|VA725_ARATH Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana
GN=VAMP725 PE=2 SV=2
Length = 285
Score = 262 bits (669), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/182 (68%), Positives = 148/182 (81%), Gaps = 2/182 (1%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M Q++LIY+FVARG V+L EYTEF GNF ++A QCLQKLP+SNNKFTYNCD HTFNYLV+
Sbjct: 66 MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 125
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVVA ES GRQIPMAFLERVK++F +YGGGKA TA AN LN+EFG KLKE MQY
Sbjct: 126 NGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQY 185
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRLSYWSIRLRTFISRHKTFGVRG 178
CVDHP+EISKLAKVKAQV+EVKGVMMENIEK+ G+++ + S+ + F +G
Sbjct: 186 CVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQG 245
Query: 179 PK 180
K
Sbjct: 246 TK 247
>sp|Q8VY69|VA723_ARATH Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana
GN=VAMP723 PE=2 SV=1
Length = 217
Score = 233 bits (594), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 129/152 (84%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
M+Q+SL Y+F+ARG V+L E+T+F GNF S+A Q L+ LP+SNNKFTYNCD HTFN LV+
Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVE 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
NG+TYCVVA +S+GR+IPMAFLERVK++F +YGG KAAT AN LNKEFG LKE MQY
Sbjct: 61 NGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQY 120
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEKI 152
C+DHP+EIS LAK KAQVSEVK +MMENIEK+
Sbjct: 121 CMDHPDEISNLAKAKAQVSEVKSLMMENIEKV 152
>sp|O23429|VA724_ARATH Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana
GN=VAMP724 PE=2 SV=2
Length = 222
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 3/187 (1%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLV 59
M Q+S IY+FVARG ++LAEYTEF+GNF SIA QCLQKLP+S+N KFTYNCD HTFN+LV
Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLV 60
Query: 60 DNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQ 119
++GY YCVVA +S +QI +AFLERVK +F +YGGGKA+TA A LNKEFGP +KE M
Sbjct: 61 EDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMN 120
Query: 120 YCVDHPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRLSYWSIRLRTFISRHKTFGVR 177
Y VDH EEI KL KVKAQVSEVK +M+ENI+K G+ L+ + + S+ + + +
Sbjct: 121 YIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQ 180
Query: 178 GPKCGGK 184
G + K
Sbjct: 181 GTQVRRK 187
>sp|Q9M376|VA727_ARATH Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana
GN=VAMP727 PE=2 SV=1
Length = 240
Score = 203 bits (517), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 126/171 (73%), Gaps = 19/171 (11%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
MSQK LIY+FVA+G VVLAE+T +SGNF++IA QCLQKLP +++K+TY+CD HTFN+LVD
Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAAT-------------------A 101
NG+ + VVADES+GR +P FLERVK++F +Y +
Sbjct: 61 NGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFS 120
Query: 102 PANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKI 152
A L++EFGP LKE MQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEK+
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKV 171
>sp|O49377|VA711_ARATH Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana
GN=VAMP711 PE=2 SV=2
Length = 219
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 99/156 (63%), Gaps = 5/156 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNN-KFTYNCDAHTFNYLVDNGY 63
+++YA VARG VVL+E+T S N ++IA Q L+K+P N+ +Y+ D + F+ +G
Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVD 123
T +A+E++GR+IP AFLE + FV YG TA A +N+EF L + + Y +
Sbjct: 62 TVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSN 120
Query: 124 HPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRL 157
P ++ ++K ++++V+GVM+ENI+K+ G+RL
Sbjct: 121 DPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERL 155
>sp|Q9LFP1|VA713_ARATH Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana
GN=VAMP713 PE=2 SV=1
Length = 221
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 99/157 (63%), Gaps = 6/157 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPA--SNNKFTYNCDAHTFNYLVDNG 62
++I+A VARG VVL+E++ S N +SI+ Q L+KLP S++ +Y+ D + F+ +G
Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDG 61
Query: 63 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCV 122
T +ADE++GR IP AFL+ + FV YG +A A +N EF L + M++
Sbjct: 62 LTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 123 DHPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRL 157
+ P +++++K ++S+V+ VM+ENI+K+ G+RL
Sbjct: 121 NDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERL 156
>sp|Q86AQ7|VAM7B_DICDI Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum
GN=vamp7B PE=3 SV=1
Length = 260
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 89/144 (61%), Gaps = 2/144 (1%)
Query: 6 LIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYTY 65
+IY+ VARG+ VLAE+T +GNF +I + L +P ++ K +Y + + F+YLV + TY
Sbjct: 3 IIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPPNDTKMSYVYEKYIFHYLVSDTLTY 62
Query: 66 CVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHP 125
+ADE GR+IP FL+ VK+ F S Y G K TA A G+N +F L+ LM + +
Sbjct: 63 LCMADEEFGRRIPFTFLDDVKNRFKSMY-GDKGKTAIAYGMNSDFSRTLENLMDH-YSNT 120
Query: 126 EEISKLAKVKAQVSEVKGVMMENI 149
+ +++ A++ EVK +++ +I
Sbjct: 121 TRVDTMSRTMAEIDEVKNILVSDI 144
>sp|Q9FMR5|VA714_ARATH Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana
GN=VAMP714 PE=2 SV=1
Length = 221
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLP--ASNNKFTYNCDAHTFNYLVDNG 62
+++YA VARG VVLAE++ +GN ++ + L+KL S+ + ++ D + F+ L +G
Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDG 61
Query: 63 YTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCV 122
T+ +A+++ GR++P ++LE + F+ Y G A APA +N EF L + M++
Sbjct: 62 LTFLCMANDTFGRRVPFSYLEEIHMRFMKNY-GKVAHNAPAYAMNDEFSRVLHQQMEFFS 120
Query: 123 DHPEEISKLAKVKAQVSEVKGVMMENIEKI 152
+P + L +V+ +VSE++ VM+ENIEKI
Sbjct: 121 SNP-SVDTLNRVRGEVSEIRSVMVENIEKI 149
>sp|Q9SIQ9|VA712_ARATH Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana
GN=VAMP712 PE=3 SV=1
Length = 219
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 96/156 (61%), Gaps = 5/156 (3%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPAS-NNKFTYNCDAHTFNYLVDNGY 63
S++YA VARG VVLAE + S N ++IA Q L+K+P + ++ +Y+ D + F+ +G
Sbjct: 2 SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGL 61
Query: 64 TYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVD 123
T +ADE +GR+IP +FLE + FV YG +A A +N EF L + ++Y +
Sbjct: 62 TVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSN 120
Query: 124 HPEEISKLAKVKAQVSEVKGVMMENIEKI--GGKRL 157
P ++++K ++++V+ VM+ENI+ I G+RL
Sbjct: 121 DPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERL 155
>sp|P70280|VAMP7_MOUSE Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=1
SV=1
Length = 220
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 8/174 (4%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R +FL VK F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFSFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PE--EISKLAKVKAQVSEVKGVMMENIEKIG--GKRLSYWSIRLRTFISRHKTF 174
E + K+ + +AQV E+KG+M+ NI+ + G+RL + + TF
Sbjct: 118 SENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTF 171
>sp|Q9JHW5|VAMP7_RAT Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7
PE=1 SV=1
Length = 220
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL VK F + Y G +A TA +N EF L +++ ++
Sbjct: 62 YLCITDDDFERSRAFGFLNEVKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKHHSEN 120
Query: 125 PEEISKLAKVKAQVSEVKGVMMENIEKIG--GKRLSYWSIRLRTFISRHKTF 174
+ + ++ + +AQV E+KG+M+ NI+ + G+RL + + TF
Sbjct: 121 -QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTF 171
>sp|P51809|VAMP7_HUMAN Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1
SV=3
Length = 220
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKIG--GKRLSYWSIRLRTFISRHKTF 174
E + K+ + +AQV E+KG+M+ NI+ + G+RL + + TF
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTF 171
>sp|Q17QI5|VAMP7_BOVIN Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2
SV=1
Length = 220
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKIG--GKRLSYWSIRLRTFISRHKTF 174
E + K+ + +AQV E+KG+M+ NI+ + G+RL + + TF
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTF 171
>sp|Q5ZL74|VAMP7_CHICK Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7
PE=2 SV=1
Length = 220
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY+ + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRII 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L ++Y H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKY---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKIG--GKRLSYWSIRLRTFISRHKTF 174
E ++A+ +AQV E+KG+M+ NI+ + G++L + + TF
Sbjct: 118 SESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTF 171
>sp|Q5RF94|VAMP7_PONAB Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2
SV=3
Length = 220
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 5 SLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDNGYT 64
++++A VARG +LA++ GNF + Q L K+P+ NNK TY + F+Y+ +
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIV 61
Query: 65 YCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDH 124
Y + D+ R FL +K F + Y G +A TA +N EF L +++ H
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY-GSRAQTALPYAMNSEFSSVLAAQLKH---H 117
Query: 125 PEE--ISKLAKVKAQVSEVKGVMMENIEKIG--GKRLSYWSIRLRTFISRHKTF 174
E + K+ + +AQV E+KG+M+ NI+ + G+RL + + TF
Sbjct: 118 SENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTF 171
>sp|Q54NW7|VAM7A_DICDI Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum
GN=vamp7A PE=1 SV=1
Length = 216
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 1 MSQKSLIYAFVARGNVVLAEYTEFSGNFNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
MSQ ++YA V+ V L E+ +GNF +A + + K+P ++ K Y + H F+Y+ +
Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISE 59
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQY 120
N + + E G QIP FL ++ +F+ YG + +P + F L+E M+Y
Sbjct: 60 NDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYD-PFIRVLEERMKY 118
Query: 121 CVDHPEEISKLAKVKAQVSEVKGVMMENIEK 151
+P+ +K+ V QVSE KG + + IEK
Sbjct: 119 -YSNPKS-NKMNLVMDQVSEAKGALTDAIEK 147
>sp|Q9Y7L0|SEC22_SCHPO Protein transport protein sec22 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec22 PE=3 SV=2
Length = 215
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 40 PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAA 99
P S + + +TF+YL+DNG Y + ++S R++ ++LE + EF + + G+ A
Sbjct: 44 PTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSF--GEEA 101
Query: 100 TAPANGLNKEFGPKLKELMQ---YCVDHPEEISKLAKVKAQVSEVKGVMMENIEKI 152
P GL + MQ + P L K+ ++ +V VM +NIE +
Sbjct: 102 LQP--GLRPYAFVQFDTFMQKSKRVYNTPRANDNLDKLNTELKDVTRVMTKNIEDL 155
>sp|Q4KM74|SC22B_RAT Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|Q5RAI9|SC22B_PONAB Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2
SV=3
Length = 215
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|O08547|SC22B_MOUSE Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1
SV=3
Length = 215
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|O08595|SC22B_CRIGR Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b
PE=1 SV=3
Length = 215
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|Q7SXP0|S22BB_DANRE Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2
SV=1
Length = 215
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S N+ T + +F+Y+++ G Y V+ + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+ EF ++ G K T EF +++ + +D L+ + ++ +V+ +M
Sbjct: 92 QAEFHEQH-GKKVPTVSRPYSFIEFDTYIQKTKKSYIDSRAR-RNLSNINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|Q5ZJW4|SC22B_CHICK Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2
SV=1
Length = 215
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A F+Y+++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
+ EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 QSEFDEQH-GKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|Q84WF5|VAMPL_ARATH Probable VAMP-like protein At1g33475 OS=Arabidopsis thaliana
GN=At1g33475 PE=2 SV=1
Length = 255
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 3 QKSLIYAFVARGNVVLAEYTEFSGNFN--SIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60
Q ++ Y V+R N ++ Y + N S+A CL+K P + + TF +L+
Sbjct: 5 QNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFGFLMK 64
Query: 61 NGYTYCVVADESSGRQIPMAFLERVKDEF 89
+ + Y + D+ + + FLE+++DE
Sbjct: 65 DDFVYFAIVDDVFKKSSVLDFLEKLRDEL 93
>sp|Q6P7L4|SC22B_XENTR Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b
PE=2 SV=1
Length = 215
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ + A Q +KL S + T A TF+YL++ G Y V+ + + +++ A+LE +
Sbjct: 32 QYQNQAKQLFRKLNEQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L+ V ++ +V+ +M
Sbjct: 92 FSEFDEQH-GKKVPTVSRPYSFIEFDNYIQKTKKSYIDSRAR-RNLSSVNTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|O75396|SC22B_HUMAN Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1
SV=4
Length = 215
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 27 NFNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERV 85
+ S A Q +KL S + T A TF+Y+++ G V+ + + + + A+LE +
Sbjct: 32 QYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCDLVLCEAAFPKTLAFAYLEDL 91
Query: 86 KDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF ++ G K T EF +++ + +D L + ++ +V+ +M
Sbjct: 92 HSEFDEQH-GKKVPTVSRPYSFIEFDTFIQKTKKLYIDSCAR-RNLGSINTELQDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|Q7ZV15|S22BA_DANRE Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2
SV=1
Length = 215
Score = 37.7 bits (86), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 28 FNSIAYQCLQKL-PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVK 86
+ S A Q +KL S + T F+Y+++ G Y + + +++ A+LE ++
Sbjct: 33 YQSQAKQLCRKLNEQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLE 92
Query: 87 DEFVSKYGGG-KAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM 145
EF +YG + + P + + EF +++ ++ +D L + +++ +V+ +M
Sbjct: 93 GEFSEQYGAKVPSVSRPYSFI--EFDTYIQKTIKSYIDSRAR-RNLGNINSELHDVQRIM 149
Query: 146 MENIEKI 152
+ NIE++
Sbjct: 150 VANIEEV 156
>sp|Q68WD8|DNAA_RICTY Chromosomal replication initiator protein DnaA OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVINFLASKIVSNVRELEGAL 336
>sp|A8GP75|DNAA_RICAH Chromosomal replication initiator protein DnaA OS=Rickettsia akari
(strain Hartford) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q59758|DNAA_RICPR Chromosomal replication initiator protein DnaA OS=Rickettsia
prowazekii (strain Madrid E) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVINFLASKIVSNVRELEGAL 336
>sp|Q1RI85|DNAA_RICBR Chromosomal replication initiator protein DnaA OS=Rickettsia bellii
(strain RML369-C) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDDIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKVPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q4UMJ3|DNAA_RICFE Chromosomal replication initiator protein DnaA OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|A8F284|DNAA_RICM5 Chromosomal replication initiator protein DnaA OS=Rickettsia
massiliae (strain Mtu5) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|C4K1R9|DNAA_RICPU Chromosomal replication initiator protein DnaA OS=Rickettsia
peacockii (strain Rustic) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|A8GSY1|DNAA_RICRS Chromosomal replication initiator protein DnaA OS=Rickettsia
rickettsii (strain Sheila Smith) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|B0BYF7|DNAA_RICRO Chromosomal replication initiator protein DnaA OS=Rickettsia
rickettsii (strain Iowa) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q92H56|DNAA_RICCN Chromosomal replication initiator protein DnaA OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=dnaA PE=3
SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|C3PP41|DNAA_RICAE Chromosomal replication initiator protein DnaA OS=Rickettsia
africae (strain ESF-5) GN=dnaA PE=3 SV=1
Length = 463
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+++ +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKDVIDFLASKIVSNVRELEGAL 336
>sp|Q3T000|YKT6_BOVIN Synaptobrevin homolog YKT6 OS=Bos taurus GN=YKT6 PE=2 SV=1
Length = 198
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 57 YLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSK-----YGGGKAATAPANGLNKEFG 111
Y+ ++ V+AD ++ LE+V DEF + + G T +GL+
Sbjct: 69 YVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPTGSPDTIRYSGLD---- 124
Query: 112 PKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVM---MENIEKIGGKRLSYWSIRLRTFI 168
+L +Y +P E + KV+A++ E K ++ ME++ + G K L +
Sbjct: 125 ---SQLSRY--QNPREADPMTKVQAELDETKIILHNTMESLLERGEK--------LDDLV 171
Query: 169 SRHKTFGVRG 178
S+ + G++
Sbjct: 172 SKSEVLGIQS 181
>sp|A8GVN1|DNAA_RICB8 Chromosomal replication initiator protein DnaA OS=Rickettsia bellii
(strain OSU 85-389) GN=dnaA PE=3 SV=1
Length = 463
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQMVISCDRSPSD------LDDIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEE-ISKLA-KVKAQVSEVKGVM 145
++ Q V P++ I LA K+ + V E++G +
Sbjct: 302 LESKIEQMNVKVPKDAIDFLASKIVSNVRELEGAL 336
>sp|Q94AU2|SEC22_ARATH 25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22
PE=2 SV=1
Length = 218
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNK--EF 110
+ F+Y+++ Y + D S +++ +LE +K+EF G A K F
Sbjct: 60 YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTF 119
Query: 111 GPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKIGG 154
K K+L Q +AK+ ++ EV +M N++++ G
Sbjct: 120 IQKTKKLYQ----DTRTQRNIAKLNDELYEVHQIMTRNVQEVLG 159
>sp|A8EY77|DNAA_RICCK Chromosomal replication initiator protein DnaA OS=Rickettsia
canadensis (strain McKiel) GN=dnaA PE=3 SV=1
Length = 463
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 53 HTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGP 112
HTFN L+DN + D S L+ ++D S+ G G A + G
Sbjct: 248 HTFNTLIDNNRQIVISCDRSPSD------LDNIEDRIKSRLGWGLVADVHSTTYELRLGI 301
Query: 113 KLKELMQYCVDHPEEISKL--AKVKAQVSEVKGVM 145
++ Q V P+ + +K+ + V E++G +
Sbjct: 302 LESKIEQMNVKIPKNVIDFLASKIVSNVRELEGAL 336
>sp|Q9CQW1|YKT6_MOUSE Synaptobrevin homolog YKT6 OS=Mus musculus GN=Ykt6 PE=2 SV=1
Length = 198
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Query: 57 YLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSK-----YGGGKAATAPANGLNKEFG 111
Y+ + V+AD ++ LE+V DEF + + G AT GL+
Sbjct: 69 YVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQYTGLD---- 124
Query: 112 PKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKIGGKRLSYWSIRLRTFISRH 171
L +Y +P E ++KV+A++ E K ++ +E + + +L +S+
Sbjct: 125 ---DHLSKY--QNPREADPMSKVQAELDETKIILHNTMESLLER-----GEKLDDLVSKS 174
Query: 172 KTFGVRG 178
+ G +
Sbjct: 175 EVLGTQS 181
>sp|A5CYB7|GLYA_PELTS Serine hydroxymethyltransferase OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=glyA PE=3 SV=1
Length = 415
Score = 33.9 bits (76), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 103 ANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEV 141
+ GLN++ ++ E+M Y ++H ++ KL K +A+V E+
Sbjct: 370 SRGLNEDDMVQIAEIMDYAIEHRDDRGKLEKARAKVDEI 408
>sp|Q6CJA0|SEC22_KLULA Protein transport protein SEC22 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC22 PE=3 SV=1
Length = 214
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 40 PASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGG--GK 97
P S N+ T +Y+ N Y VVA+ + R + ++L ++ EF YGG K
Sbjct: 43 PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSK 102
Query: 98 AATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKI 152
+ P ++ F L++ + D + + ++ + VK +M +NIE +
Sbjct: 103 SNVRPYEFVS--FDNFLQKTKKVYNDKRVQ-GNMDQLNQDLKGVKQIMTKNIEDL 154
>sp|Q642F4|SC22A_RAT Vesicle-trafficking protein SEC22a OS=Rattus norvegicus GN=Sec22a
PE=2 SV=1
Length = 307
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 37 QKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGG 96
+KL ++ T H N++ G +Y ++ E+ + +FL+ ++ EF++ Y
Sbjct: 42 RKLAQFPDRCTLKTGRHNINFISSLGVSYMMLCTENYPNVLAFSFLDELQKEFITTYNMM 101
Query: 97 KAATA 101
K TA
Sbjct: 102 KTNTA 106
>sp|A6U8M8|DGTL1_SINMW Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Sinorhizobium medicae (strain WSM419) GN=Smed_1157
PE=3 SV=1
Length = 405
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 96 GKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKI-GG 154
G TA GL GP + ++ YC H E++ A ++AQV+ + + N I G
Sbjct: 170 GPLTTADGQGLR---GPVSQPILDYCALHDLELASFASLEAQVAAIADDIAYNTHDIDDG 226
Query: 155 KRLSYWSIRL 164
R Y + +
Sbjct: 227 LRAGYLTFEM 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,542,082
Number of Sequences: 539616
Number of extensions: 2862406
Number of successful extensions: 8117
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 8061
Number of HSP's gapped (non-prelim): 67
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)