Query 029729
Match_columns 189
No_of_seqs 117 out of 888
Neff 8.9
Searched_HMMs 13730
Date Mon Mar 25 03:45:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029729.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029729hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ifqa_ d.110.4.1 (A:) Sec22b 100.0 3.4E-29 2.5E-33 175.6 16.2 116 5-121 1-126 (127)
2 d1ioua_ d.110.4.1 (A:) Synapto 99.8 6.1E-21 4.5E-25 135.6 9.1 123 4-129 1-139 (140)
3 d2fh5a1 d.110.4.4 (A:1-129) Si 98.1 4.2E-06 3.1E-10 56.9 6.2 86 7-94 4-95 (129)
4 d2vglm2 d.110.4.2 (M:1-141) Mu 95.8 0.087 6.4E-06 35.1 11.1 49 46-94 46-94 (141)
5 d2vgls_ d.110.4.2 (S:) Sigma2 95.5 0.062 4.5E-06 36.1 9.3 48 47-94 49-96 (142)
6 d2j3wa1 d.110.4.3 (A:1-140) Se 80.3 5.7 0.00041 25.9 13.2 114 5-121 4-137 (140)
7 d1utga_ a.101.1.1 (A:) Uterogl 61.5 4.5 0.00032 23.2 3.4 41 114-154 21-61 (70)
8 d1ccda_ a.101.1.1 (A:) Clara c 59.9 6.2 0.00045 23.0 3.9 41 114-154 23-63 (77)
9 d1xl7a2 c.43.1.3 (A:393-610) P 37.8 55 0.004 22.5 6.9 41 51-91 169-210 (218)
10 d1t1ua2 c.43.1.3 (A:402-616) C 33.8 66 0.0048 22.0 6.8 41 51-91 167-208 (215)
11 d1z21a1 a.243.1.2 (A:42-145) Y 27.5 61 0.0044 19.6 5.2 56 80-142 26-81 (104)
12 d2ejna1 a.101.1.1 (A:1-72) All 27.5 44 0.0032 18.7 3.8 25 116-140 23-47 (72)
13 d1u00a1 a.8.4.1 (A:504-615) Ch 27.3 61 0.0045 19.5 5.4 40 129-175 54-93 (112)
14 d1nm8a2 c.43.1.3 (A:386-599) C 24.0 1E+02 0.0074 20.9 6.6 41 51-91 166-207 (214)
15 d256ba_ a.24.3.1 (A:) Cytochro 22.5 77 0.0056 19.0 4.8 40 137-176 2-42 (106)
16 d2clyc1 f.45.1.1 (C:5-70) ATPa 22.0 63 0.0046 17.8 4.1 41 79-122 6-48 (66)
17 d2r2za1 d.145.1.4 (A:5-88) Put 20.4 74 0.0054 18.0 5.0 33 28-60 38-70 (84)
18 d2a26a1 a.2.16.1 (A:1-47) Calc 20.1 50 0.0036 16.6 2.7 17 132-148 4-20 (47)
No 1
>d1ifqa_ d.110.4.1 (A:) Sec22b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.96 E-value=3.4e-29 Score=175.62 Aligned_cols=116 Identities=23% Similarity=0.393 Sum_probs=103.6
Q ss_pred eeEEEEEEeCC--eeeeeeeccCCC-------HHHHHHHHhcCCCC-CCCeeEEEecCeEEEEEEeCCEEEEEEecCCCC
Q 029729 5 SLIYAFVARGN--VVLAEYTEFSGN-------FNSIAYQCLQKLPA-SNNKFTYNCDAHTFNYLVDNGYTYCVVADESSG 74 (189)
Q Consensus 5 ~I~Ya~Iar~~--~iLae~~~~~~~-------~~~~~~~vL~ki~~-~~~k~s~~~~~~~~h~l~~~~~~~l~it~~~~~ 74 (189)
+|+|++|||++ +||||+++.+++ +..+|+.+|++++| +++|++++.++|.|||++++|++|+||||++||
T Consensus 1 sil~t~IaR~~DgL~L~~s~~~~~~~~~~~~~~k~qak~ll~kl~~~~~~r~s~~~~~y~fHy~~~~gi~yl~i~d~~~~ 80 (127)
T d1ifqa_ 1 SVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFP 80 (127)
T ss_dssp CCCEEEEEETTTCCEEEEECCCTTCCHHHHHHHHHHHHHHHTTCCTTSCSEEEEEETTEEEEEEEETTEEEEEEEETTSC
T ss_pred CeEEEEEEEecCCcEEEEEeccccccchhHHHHHHHHHHHHHhCCCCCCCcEEEEECCEEEEEEecCCeEEEEEEccccC
Confidence 58999999975 899999865543 45689999999987 468999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHhhhCCCCCCCCCCCccccchhHHHHHHHHHh
Q 029729 75 RQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYC 121 (189)
Q Consensus 75 ~~~af~fL~~i~~~F~~~~~~~~~~~~~~~~l~~~F~~~l~~~~~~y 121 (189)
+++||.||++|+++|...|+.......+||+| .+|+..|++.++.|
T Consensus 81 ~~laF~fLeei~~eF~~~y~~~i~~~~rpy~F-i~Fd~~iqk~k~~y 126 (127)
T d1ifqa_ 81 KKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSF-IEFDTFIQKTKKLY 126 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTTCCSTTTT-GGGHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhhhhhhcccCCcch-HHHHHHHHHHHHhc
Confidence 99999999999999999997554555689999 89999999999887
No 2
>d1ioua_ d.110.4.1 (A:) Synaptobrevin homolog 1 ykt6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=6.1e-21 Score=135.64 Aligned_cols=123 Identities=14% Similarity=0.160 Sum_probs=96.1
Q ss_pred ceeEEEEEEeC--C--eeeeeeeccC-------CCHHH----HHHHHhcCCCCCCCeeEEEecCeEEE-EEEeCCEEEEE
Q 029729 4 KSLIYAFVARG--N--VVLAEYTEFS-------GNFNS----IAYQCLQKLPASNNKFTYNCDAHTFN-YLVDNGYTYCV 67 (189)
Q Consensus 4 ~~I~Ya~Iar~--~--~iLae~~~~~-------~~~~~----~~~~vL~ki~~~~~k~s~~~~~~~~h-~l~~~~~~~l~ 67 (189)
|.|++..|.+. + ++|+...|.+ +++.+ +++.++++++++ +|++++.++|.|| |...+|++|+|
T Consensus 1 Mkl~~~~v~~~~~~~~~~L~~a~Dlssf~ffqR~svkE~~~f~sr~i~~Rt~~g-~r~sv~~~~y~~h~yv~~~gl~~l~ 79 (140)
T d1ioua_ 1 MRIYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAG-ERQSIEEGNYIGHVYARSEGICGVL 79 (140)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEECCSSCCTTHHHHHHHHHHHHHHHHHHHCCSS-SEEEEEETTEEEEEECCSSSCEEEE
T ss_pred CeEEEEEEEEcCCCCcEEEeeeccccccceeehHhHHHHHHHHHHHHhhcCCCC-ceEEEEcCCeEEEEEEeeCCEEEEE
Confidence 67888888883 2 6787776643 22233 789999999884 8999999999999 56689999999
Q ss_pred EecCCCCcccHHHHHHHHHHHHHhhhCCCCCCCCCCCccccchhHHHHHHHHHhcCChhhhH
Q 029729 68 VADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEIS 129 (189)
Q Consensus 68 it~~~~~~~~af~fL~~i~~~F~~~~~~~~~~~~~~~~l~~~F~~~l~~~~~~yn~~~~~~d 129 (189)
|||.+||+|+||.||++|.++|...+++..|... ..+.+..+-+.|.+++++| +||.++|
T Consensus 80 i~d~~Yp~r~AF~~L~~i~~eF~~~~~~~~~~~i-~~~~~~~~~~~l~~~l~kY-QdP~~aD 139 (140)
T d1ioua_ 80 ITDKQYPVRPAYTLLNKILDEYLVAHPKEEWADV-TETNDALKMKQLDTYISKY-QDPSQAD 139 (140)
T ss_dssp EBCTTSCHHHHHHHHHHHHHHHHHSSCHHHHTTC-SCCCTTTSCHHHHHHHHHT-TSSCGGG
T ss_pred EECCCcchHHHHHHHHHHHHHHHHHcChHhhhhh-hccccccchHHHHHHHHHh-Cchhhcc
Confidence 9999999999999999999999999974434322 1122233447899999999 7898766
No 3
>d2fh5a1 d.110.4.4 (A:1-129) Signal recognition particle receptor alpha subunit, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.05 E-value=4.2e-06 Score=56.94 Aligned_cols=86 Identities=19% Similarity=0.303 Sum_probs=61.3
Q ss_pred EEEEEEeCCeeeeeeeccCCC----HHHHHHHHhcCCCCCCCeeEEEecCeEEEEEEeC--CEEEEEEecCCCCcccHHH
Q 029729 7 IYAFVARGNVVLAEYTEFSGN----FNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVDN--GYTYCVVADESSGRQIPMA 80 (189)
Q Consensus 7 ~Ya~Iar~~~iLae~~~~~~~----~~~~~~~vL~ki~~~~~k~s~~~~~~~~h~l~~~--~~~~l~it~~~~~~~~af~ 80 (189)
.++.+.+|++||+.|.....+ ...+++.++-.=. .+..++.+++|..++..++ +++|++|-..-.+-..+=.
T Consensus 4 ~f~IftkGGiVLW~~~~~~~~~~~~IN~LI~~vlLEER--~~~~~~~~d~y~lkw~~~Ne~~lvfV~vYQ~il~l~yvd~ 81 (129)
T d2fh5a1 4 FFTIFSKGGLVLWCFQGVSDSCTGPVNALIRSVLLQER--GGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDK 81 (129)
T ss_dssp EEEEEETTSBEEEEEBTTTBSCCCHHHHHHHHTGGGC---------CCCCCEEEEEEETTTTEEEEEEESCGGGHHHHHH
T ss_pred EEEEEeCCeEEEEeecCCCcccchhHHHHHHHhheecc--cCCCceeECCEEEEEEEeccCCEEEEEEEhhhhchHHHHH
Confidence 578899999999998643333 4555555553222 2335578899999887765 7999999777777677779
Q ss_pred HHHHHHHHHHhhhC
Q 029729 81 FLERVKDEFVSKYG 94 (189)
Q Consensus 81 fL~~i~~~F~~~~~ 94 (189)
||+.++..|.+.|.
T Consensus 82 lL~~i~~~F~~~y~ 95 (129)
T d2fh5a1 82 LIDDVHRLFRDKYR 95 (129)
T ss_dssp HHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999886
No 4
>d2vglm2 d.110.4.2 (M:1-141) Mu2 adaptin (clathrin coat assembly protein AP50) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.83 E-value=0.087 Score=35.13 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=43.3
Q ss_pred eEEEecCeEEEEEEeCCEEEEEEecCCCCcccHHHHHHHHHHHHHhhhC
Q 029729 46 FTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYG 94 (189)
Q Consensus 46 ~s~~~~~~~~h~l~~~~~~~l~it~~~~~~~~af~fL~~i~~~F~~~~~ 94 (189)
-.+..+++.|.|...+++.|+|+++.+.+.-.++.||..+.+-+..-++
T Consensus 46 pi~~~~~~~~~~~~~~~l~~v~v~~~~~n~l~~~e~L~~~~~~l~~y~~ 94 (141)
T d2vglm2 46 PVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFG 94 (141)
T ss_dssp SEEEETTEEEEEEEETTEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHS
T ss_pred CeEEECCEEEEEEEECCEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4567899998888899999999999999999999999999988877664
No 5
>d2vgls_ d.110.4.2 (S:) Sigma2 adaptin (clathrin coat assembly protein AP17) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.53 E-value=0.062 Score=36.10 Aligned_cols=48 Identities=8% Similarity=0.166 Sum_probs=43.2
Q ss_pred EEEecCeEEEEEEeCCEEEEEEecCCCCcccHHHHHHHHHHHHHhhhC
Q 029729 47 TYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYG 94 (189)
Q Consensus 47 s~~~~~~~~h~l~~~~~~~l~it~~~~~~~~af~fL~~i~~~F~~~~~ 94 (189)
.++++++.|.|...+++.++++++.+.+.-..+.||..+.+-+..-++
T Consensus 49 i~~~~~~~~vy~~~~~l~~v~~~~~~~n~l~~~e~L~~~~~~l~~~~~ 96 (142)
T d2vgls_ 49 FVEFRNFKIIYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFH 96 (142)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEECCEEEEEEEECCEEEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 678899999998899999999999999999999999999988877564
No 6
>d2j3wa1 d.110.4.3 (A:1-140) Sedlin (SEDL) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=80.34 E-value=5.7 Score=25.90 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=68.6
Q ss_pred eeEEEEEEeCCeeeeee--eccCC-----C------H-HHHHHHHhcCCCCC----CCeeEEEecCeEEEEE-EeCCEEE
Q 029729 5 SLIYAFVARGNVVLAEY--TEFSG-----N------F-NSIAYQCLQKLPAS----NNKFTYNCDAHTFNYL-VDNGYTY 65 (189)
Q Consensus 5 ~I~Ya~Iar~~~iLae~--~~~~~-----~------~-~~~~~~vL~ki~~~----~~k~s~~~~~~~~h~l-~~~~~~~ 65 (189)
+..++.|.|.+.+|.+. +..+. + | .-.+..++++..+. .-+.....++|..|+. .-.|+=|
T Consensus 4 ~y~f~IIg~~~~pLY~~ef~~~~~~~~~~~~~~~~~fi~hssLDive~~~~~~~~~~l~~l~~~~~~~v~~y~T~tg~Kf 83 (140)
T d2j3wa1 4 SFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRF 83 (140)
T ss_dssp CEEEEEECTTSCEEEEEEECCSCCGGGHHHHHHHHHHHHHHHHHHHHHHGGGCSCSEEEEEEEETTEEEEEEECTTCCEE
T ss_pred EEEEEEEcCCCCeeEEEecCCcccccccchHHHHHHHHHHHHHHHHHHhcccCCCccceeEEecCCEEEEEEEcCCCcEE
Confidence 56677888888887654 32111 1 1 11334444444432 1234456688877654 4689999
Q ss_pred EEEecCCCCcccHHHHHHHHHHHHHhhhCCCCCCC-CCCCccccchhHHHHHHHHHh
Q 029729 66 CVVADESSGRQIPMAFLERVKDEFVSKYGGGKAAT-APANGLNKEFGPKLKELMQYC 121 (189)
Q Consensus 66 l~it~~~~~~~~af~fL~~i~~~F~~~~~~~~~~~-~~~~~l~~~F~~~l~~~~~~y 121 (189)
+.++++.-+. ..-.|+.++.+.|..... ++.-. ..|.. ...|+..++++.++|
T Consensus 84 vl~td~~~~~-~i~~~~~~v~~lYv~~v~-NPfy~~~~pI~-s~~Fd~~v~~~~~~~ 137 (140)
T d2j3wa1 84 IMLHDVRQED-GIKNFFTDVYDLYIKFAM-NPFYEPNSPIR-SSAFDRKVQFLGKKH 137 (140)
T ss_dssp EEEESSCCHH-HHHHHHHHHHHHHHHHHH-STTCCTTCCCC-CHHHHHHHHHHHHHH
T ss_pred EEEeCCCcch-HHHHHHHHHHHHHHHHhh-CccCCCCCccc-CHHHHHHHHHHHHHH
Confidence 9999876543 345788888888876443 33221 12332 267999999988877
No 7
>d1utga_ a.101.1.1 (A:) Uteroglobin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=61.50 E-value=4.5 Score=23.22 Aligned_cols=41 Identities=12% Similarity=0.051 Sum_probs=31.0
Q ss_pred HHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 029729 114 LKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKIGG 154 (189)
Q Consensus 114 l~~~~~~yn~~~~~~dkl~~~~~~v~~v~~im~~Ni~~il~ 154 (189)
-..-++.||.||.-.+...++++-||...+.=..||-++++
T Consensus 21 Y~~~vk~y~~~~~~le~~~~lK~cvDtLt~edK~~i~~lie 61 (70)
T d1utga_ 21 YETSLKEFEPDDTMKDAGMQMKKVLDSLPQTTRENIMKLTE 61 (70)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 34556788888877788899999998776666777766665
No 8
>d1ccda_ a.101.1.1 (A:) Clara cell 17kDa protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=59.93 E-value=6.2 Score=23.00 Aligned_cols=41 Identities=12% Similarity=0.028 Sum_probs=31.6
Q ss_pred HHHHHHHhcCChhhhHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 029729 114 LKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKIGG 154 (189)
Q Consensus 114 l~~~~~~yn~~~~~~dkl~~~~~~v~~v~~im~~Ni~~il~ 154 (189)
-..-++.||.||.-.+...++++-||...+-=..||-++++
T Consensus 23 Y~~~vk~y~~d~~~lea~~~LK~cVDtLteedK~~i~~lie 63 (77)
T d1ccda_ 23 YEAALKPFNPASDLQNAGTQLKRLVDTLPQETRINIVKLTE 63 (77)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHhcCCHhhHHHHHHHHH
Confidence 34556788888887788999999999777777777777665
No 9
>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.77 E-value=55 Score=22.50 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=29.5
Q ss_pred cCeEEEEEEeCCEEEEEEec-CCCCcccHHHHHHHHHHHHHh
Q 029729 51 DAHTFNYLVDNGYTYCVVAD-ESSGRQIPMAFLERVKDEFVS 91 (189)
Q Consensus 51 ~~~~~h~l~~~~~~~l~it~-~~~~~~~af~fL~~i~~~F~~ 91 (189)
+||-++|.+.++-+.++|+. .+.|.+-+-.|.+.|.+....
T Consensus 169 dGyGi~Y~i~~d~i~~~vss~~s~~~t~~~~f~~~L~~al~d 210 (218)
T d1xl7a2 169 NGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHD 210 (218)
T ss_dssp TCEEEEEEEETTEEEEEEEEETTCTTCCHHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCCEEEEEEEecCCCCccCHHHHHHHHHHHHHH
Confidence 78988898876555566664 788887777788777766544
No 10
>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.84 E-value=66 Score=21.98 Aligned_cols=41 Identities=20% Similarity=0.301 Sum_probs=30.2
Q ss_pred cCeEEEEEEe-CCEEEEEEecCCCCcccHHHHHHHHHHHHHh
Q 029729 51 DAHTFNYLVD-NGYTYCVVADESSGRQIPMAFLERVKDEFVS 91 (189)
Q Consensus 51 ~~~~~h~l~~-~~~~~l~it~~~~~~~~af~fL~~i~~~F~~ 91 (189)
+||-++|.+. |.+.|.+-+-.+.|.+-+-.|.+.|.+....
T Consensus 167 dGyGi~Y~i~~d~i~f~iss~~s~~~t~~~~f~~~L~~al~~ 208 (215)
T d1t1ua2 167 NGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVD 208 (215)
T ss_dssp TCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCEEEEEEEeCCCCcccCHHHHHHHHHHHHHH
Confidence 6898888885 5666666666888887788888887766544
No 11
>d1z21a1 a.243.1.2 (A:42-145) Yop proteins translocation protein H, YscH (IcrP) {Yersinia pestis [TaxId: 632]}
Probab=27.48 E-value=61 Score=19.56 Aligned_cols=56 Identities=18% Similarity=0.322 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCCCCccccchhHHHHHHHHHhcCChhhhHHHHHHHHHHHHHH
Q 029729 80 AFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVK 142 (189)
Q Consensus 80 ~fL~~i~~~F~~~~~~~~~~~~~~~~l~~~F~~~l~~~~~~yn~~~~~~dkl~~~~~~v~~v~ 142 (189)
.++.-+.++....|++......++..+ +.|+.+|.+| +|.+..+=+.+-.-+.++|
T Consensus 26 ~L~~pv~e~L~~~Fgg~ql~v~p~~D~-----pELra~lrEf--~P~g~q~E~vLl~~l~elK 81 (104)
T d1z21a1 26 VLATPVREALLARFGQHQGSVVPAIDL-----PELRSVLQQF--DSFGKRWEAILLQVLEGIK 81 (104)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCCHHHHH-----HHHHHHHHHH--SCSSHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHhcccccCCCCccch-----HHHHHHHHHh--CcchhHHHHHHHHHHHHcC
Confidence 567778888888887544333344443 8899999888 3543344344444444444
No 12
>d2ejna1 a.101.1.1 (A:1-72) Allergen Fel d I-A chain {Cat (Felis catus) [TaxId: 9685]}
Probab=27.45 E-value=44 Score=18.73 Aligned_cols=25 Identities=16% Similarity=0.098 Sum_probs=15.8
Q ss_pred HHHHHhcCChhhhHHHHHHHHHHHH
Q 029729 116 ELMQYCVDHPEEISKLAKVKAQVSE 140 (189)
Q Consensus 116 ~~~~~yn~~~~~~dkl~~~~~~v~~ 140 (189)
+.+++|+++|.-..+-.++++-++.
T Consensus 23 eyvkqY~~~p~vLEnae~iK~CvDs 47 (72)
T d2ejna1 23 EQVAQYKALPVVLENARILKNCVDA 47 (72)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHhHHHHHHHhhh
Confidence 4457788888655555566665554
No 13
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=27.29 E-value=61 Score=19.50 Aligned_cols=40 Identities=5% Similarity=0.116 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHhHHHhc
Q 029729 129 SKLAKVKAQVSEVKGVMMENIEKIGGKRLSYWSIRLRTFISRHKTFG 175 (189)
Q Consensus 129 dkl~~~~~~v~~v~~im~~Ni~~il~e~l~~L~~kt~~L~~~s~~f~ 175 (189)
+....++..+++++..+.. +..+.+...++.|...+..|.
T Consensus 54 ~e~~~i~~~i~~l~~~l~~-------~d~~~I~~~~~~L~~~~~~~a 93 (112)
T d1u00a1 54 AERQVIDDAAAHLSEVAQG-------DDVDAIEQAIKNVDKQTQDFA 93 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTS-------SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH
Confidence 5566777777776654432 556677777777777777763
No 14
>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.01 E-value=1e+02 Score=20.93 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=27.8
Q ss_pred cCeEEEEEEeC-CEEEEEEecCCCCcccHHHHHHHHHHHHHh
Q 029729 51 DAHTFNYLVDN-GYTYCVVADESSGRQIPMAFLERVKDEFVS 91 (189)
Q Consensus 51 ~~~~~h~l~~~-~~~~l~it~~~~~~~~af~fL~~i~~~F~~ 91 (189)
+||-++|.+.+ .+.|.+-+-.+.|.+-+-.|.+.|.+....
T Consensus 166 dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~f~~~L~~al~d 207 (214)
T d1nm8a2 166 DGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLD 207 (214)
T ss_dssp TCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCCEEEEEEEecCCCcccCHHHHHHHHHHHHHH
Confidence 68988998864 555555555777776666777777665543
No 15
>d256ba_ a.24.3.1 (A:) Cytochrome b562 {Escherichia coli [TaxId: 562]}
Probab=22.52 E-value=77 Score=18.97 Aligned_cols=40 Identities=8% Similarity=0.007 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhHHHHHH-HHHhHHHHHHHHHHHhHHHhcc
Q 029729 137 QVSEVKGVMMENIEKIGG-KRLSYWSIRLRTFISRHKTFGV 176 (189)
Q Consensus 137 ~v~~v~~im~~Ni~~il~-e~l~~L~~kt~~L~~~s~~f~~ 176 (189)
+|++.-..|..|...+.+ ...+.+..-.++|...+..+.+
T Consensus 2 dl~~~M~~m~~a~k~~~~A~s~~Ei~~~m~~lr~a~~d~~~ 42 (106)
T d256ba_ 2 DLEDNMETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK 42 (106)
T ss_dssp CHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 466677778888888888 7777777777777777766654
No 16
>d2clyc1 f.45.1.1 (C:5-70) ATPase subunit F6 {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.96 E-value=63 Score=17.82 Aligned_cols=41 Identities=20% Similarity=0.400 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhhhCC--CCCCCCCCCccccchhHHHHHHHHHhc
Q 029729 79 MAFLERVKDEFVSKYGG--GKAATAPANGLNKEFGPKLKELMQYCV 122 (189)
Q Consensus 79 f~fL~~i~~~F~~~~~~--~~~~~~~~~~l~~~F~~~l~~~~~~yn 122 (189)
--||+.|+ +|...... ......+ ....+....|.++.+.|+
T Consensus 6 kLFldKiR-EY~~Ks~~~Gg~vD~~P--e~~kel~~el~kl~~~YG 48 (66)
T d2clyc1 6 KLFVDKIR-EYRTKRQTSGGPVDAGP--EYQQDLDRELFKLKQMYG 48 (66)
T ss_dssp HHHHHHHH-HHHHHHTCCSSSSSCCT--HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH-HHHHhcccCCCCCCCCH--HHHHHHHHHHHHHHHHHC
Confidence 35889988 57665421 2222222 233566677777778884
No 17
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=20.38 E-value=74 Score=17.95 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCCCCeeEEEecCeEEEEEEe
Q 029729 28 FNSIAYQCLQKLPASNNKFTYNCDAHTFNYLVD 60 (189)
Q Consensus 28 ~~~~~~~vL~ki~~~~~k~s~~~~~~~~h~l~~ 60 (189)
+...+...+.++|..+.+.++.++++.|-++.-
T Consensus 38 igG~i~~~lg~iP~~Ge~~~i~~~~~~f~V~~~ 70 (84)
T d2r2za1 38 MAGYLITALGTIPDEGEKPSFEVGNIKLTAEEM 70 (84)
T ss_dssp HHHHHHHHHSSCCCTTCCCEEEETTEEEEEEEE
T ss_pred HHHHHHHHhCcCCCCCCEEEEEECCEEEEEEEc
Confidence 555666778899987778899999999887653
No 18
>d2a26a1 a.2.16.1 (A:1-47) Calcyclin-binding protein, CacyBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.07 E-value=50 Score=16.57 Aligned_cols=17 Identities=18% Similarity=0.343 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHh
Q 029729 132 AKVKAQVSEVKGVMMEN 148 (189)
Q Consensus 132 ~~~~~~v~~v~~im~~N 148 (189)
..++.++++|+..+.+.
T Consensus 4 eElqkDLeEvk~LLeka 20 (47)
T d2a26a1 4 EELQKDLEEVKVLLEKA 20 (47)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHhhHHHHHHHHHHH
Confidence 57889999999887654
Done!