BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029736
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|86156022|gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
Length = 194
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 141/189 (74%), Gaps = 9/189 (4%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
++ SGC+VYIGNLDE+VS+RVLYDILIQAGRVVDLYIPRDKETD+PKGFAF EYE+EEIA
Sbjct: 2 SAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEIA 61
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISH 123
DYA+KLFSG+VTLYNRTL+FA+SGQDK SS TP S+ P PVP N ME S
Sbjct: 62 DYAVKLFSGLVTLYNRTLKFAISGQDK---PSSAAITPTSNSSLEPKPHPVPFNNMENSQ 118
Query: 124 HSM------RISGTRHYSSEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSISRS 177
HSM R++ ++ P H+ N Y + L+ +YDYSRRVFGATLDSISR+
Sbjct: 119 HSMGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRT 178
Query: 178 RSGRYNTSN 186
RS Y++SN
Sbjct: 179 RSRYYDSSN 187
>gi|225460024|ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|297734803|emb|CBI17037.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 141/189 (74%), Gaps = 9/189 (4%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
++ SGC+VYIGNLDE+VS+RVLYDILIQAGRVVDLYIPRDKETD+PKGFAF EYE+EEIA
Sbjct: 2 SAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEIA 61
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISH 123
DYA+KLFSG+VTLYNRTL+FA+SGQDK SS TP S+ P PVP N ME S
Sbjct: 62 DYAVKLFSGLVTLYNRTLKFAISGQDK---PSSAAITPTSNSSLEPKPHPVPFNNMENSQ 118
Query: 124 HSM------RISGTRHYSSEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSISRS 177
HSM R++ ++ P H+ N Y + L+ +YDYSRRVFGATLDSISR+
Sbjct: 119 HSMGLRTPCRLAAHPVNYAQVPASSDTLHQPNRYSSQLDGHSYDYSRRVFGATLDSISRT 178
Query: 178 RSGRYNTSN 186
RS +++SN
Sbjct: 179 RSRYHDSSN 187
>gi|356576175|ref|XP_003556209.1| PREDICTED: uncharacterized protein LOC100803118 [Glycine max]
Length = 196
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 142/190 (74%), Gaps = 7/190 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSGNSN C+VYIGNLDE+V++RVLYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSN--CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
EIADYA++LFSG++TLYNRTL+FA+SG+DK T N S P + R P PVP+N E
Sbjct: 59 EIADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAIAPTLNSSQRPRPYPVPINNSE 118
Query: 121 ISHHSMRISGTRHYS-----SEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSIS 175
H R+S +S + + P VT +S+GY +H + NY+YSRR FGATLDSIS
Sbjct: 119 NFQHPARLSTPDRFSDYPVNNSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLDSIS 178
Query: 176 RSRSGRYNTS 185
RSRS ++ S
Sbjct: 179 RSRSRHFDKS 188
>gi|356535691|ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max]
Length = 186
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 133/177 (75%), Gaps = 7/177 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSGNSN C+VYIGNLDE+V++RVLYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSN--CSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
EIADYA++LFSG++TLYNRTL+FA+SG+DK T N S TP S+ R P PV +N E
Sbjct: 59 EIADYAVRLFSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSE 118
Query: 121 ISHHSMRISGTRHYSSE-----EPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLD 172
HS R+S +S + P VT +S+GY +H + NY+YSRR FGATLD
Sbjct: 119 NFQHSARLSTPDRFSDHPVNYSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLD 175
>gi|224127921|ref|XP_002329210.1| predicted protein [Populus trichocarpa]
gi|222870991|gb|EEF08122.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 147/191 (76%), Gaps = 7/191 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG S+ C++YIGNLDE+VS+RVLYDILIQAGRVVDL+IPRD+ETDKPKG+AF EYE+E
Sbjct: 1 MSGPSS--CSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPV-PVPVNGM 119
EIADYA+KLFSG+VTLYNRTL+FA+SGQDK QN+ P+ + +R P PV +N +
Sbjct: 59 EIADYAVKLFSGLVTLYNRTLKFAISGQDKLAQNNLNGVVPVPNSSNRQRPSHPVLINNL 118
Query: 120 EISHHSMRISGTRHYSS----EEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSIS 175
EI +HSMR+S S+ + PPGVT+ SNGY ++ N + D RR+FG+ +++IS
Sbjct: 119 EIPNHSMRLSAPSRVSAYPANDSLAPPGVTNLSNGYGSNSNGNSNDSDRRLFGSAVNAIS 178
Query: 176 RSRSGRYNTSN 186
RSRS Y+TSN
Sbjct: 179 RSRSRWYDTSN 189
>gi|357443447|ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
gi|355481049|gb|AES62252.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
Length = 200
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 135/193 (69%), Gaps = 11/193 (5%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSGNS+ C VYIGNLDE+V++R+LYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSS--CTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
EIADYA++LFSG+VTLY RTL+FA+SG+DKNT NSS TTP S+ R P PV +N E
Sbjct: 59 EIADYAVRLFSGLVTLYKRTLKFAISGRDKNTPNSSTATTPSSNSSQRPRPYPVQINSSE 118
Query: 121 ISHHSMRISGTRHYSSEEPPPPGV---------THESNGYETHLNVTNYDYSRRVFGATL 171
HS R S +S V T++SN Y +H + D+SRR FG L
Sbjct: 119 NFQHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLDHSRRAFGEEL 178
Query: 172 DSISRSRSGRYNT 184
D+ SRSR R +T
Sbjct: 179 DNASRSRPRRPDT 191
>gi|217074838|gb|ACJ85779.1| unknown [Medicago truncatula]
Length = 218
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 135/198 (68%), Gaps = 16/198 (8%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSGNS+ C VYIGNLDE+V++R+LYDILIQAGRVVDL+IP+DKE++KPKGFAF EYE+E
Sbjct: 1 MSGNSS--CTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFA-----LSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
EIADYA++LFSG+VTLY RTL+FA LSG+DKNT NSS TTP S+ R P PV
Sbjct: 59 EIADYAVRLFSGLVTLYKRTLKFASANKQLSGRDKNTPNSSTATTPSSNSSQRPRPYPVQ 118
Query: 116 VNGMEISHHSMRISGTRHYSSEEPPPPGV---------THESNGYETHLNVTNYDYSRRV 166
+N E HS R S +S V T++SN Y +H + D+SRR
Sbjct: 119 INSSENFQHSARQSIPDRFSDRALNYSQVGELLGRNRATNQSNAYGSHFGGNHLDHSRRA 178
Query: 167 FGATLDSISRSRSGRYNT 184
FG LD+ SRSR R +T
Sbjct: 179 FGEELDNASRSRPRRPDT 196
>gi|255564912|ref|XP_002523449.1| spliceosome associated protein, putative [Ricinus communis]
gi|223537277|gb|EEF38908.1| spliceosome associated protein, putative [Ricinus communis]
Length = 201
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 129/179 (72%), Gaps = 9/179 (5%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M G+S S C VYIGNLDE+VSERVLYDILIQAGRVV+LYIPRDKETDK KG+AF EYESE
Sbjct: 1 MHGSSTS-CTVYIGNLDERVSERVLYDILIQAGRVVELYIPRDKETDKSKGYAFAEYESE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
+IADYA+KLFSG+V L+NRTL+FA+SGQDK QN S S+ ++ P P+P+N ++
Sbjct: 60 QIADYAVKLFSGLVILHNRTLKFAISGQDKALQNVSSGAMHASNSSNKPRPYPMPMNNVD 119
Query: 121 ISHHSMRISGTRHYS------SEEPPPPGVTHESNGYETHLNVTNYD--YSRRVFGATL 171
++ SMR+S + S S+ P GVTH NG+ + N NYD RRVFG++
Sbjct: 120 NTNQSMRLSASCRISAYPYNHSQVPVSSGVTHHHNGFGSQFNGVNYDNGIGRRVFGSSF 178
>gi|297813453|ref|XP_002874610.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320447|gb|EFH50869.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 171
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 127/190 (66%), Gaps = 27/190 (14%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MS NSN C VYIGN+DE+VS+RVLYDI+IQAGRV+DL+IPRDKETDKPKGFAF EYE+E
Sbjct: 1 MSTNSN--CTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
EIADYA+KLFSG+V+LYNR L+FA+SGQDK NS T P S SD G
Sbjct: 59 EIADYAVKLFSGLVSLYNRNLKFAISGQDKLQANSGQRTRPQSLAFEHSD------RGYN 112
Query: 121 ISHHSMRISGTRHYS--------SEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLD 172
HHS R S ++EPPPPGV SNG + +YSRRV G+ LD
Sbjct: 113 -HHHSERFSSQLISPPSPLPLDYTQEPPPPGV---SNG-------ASLEYSRRVLGSALD 161
Query: 173 SISRSRSGRY 182
SI+ SR RY
Sbjct: 162 SINHSRPRRY 171
>gi|359474604|ref|XP_002274629.2| PREDICTED: uncharacterized protein LOC100252755 [Vitis vinifera]
gi|147777236|emb|CAN76637.1| hypothetical protein VITISV_010659 [Vitis vinifera]
gi|296083375|emb|CBI23264.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 120/174 (68%), Gaps = 16/174 (9%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+ SGC VYIGNLDE+VSERVLYDILIQ GRVVDLYIPRDKET++PKG+AF EYE+EEIA+
Sbjct: 3 TKSGCAVYIGNLDERVSERVLYDILIQVGRVVDLYIPRDKETERPKGYAFAEYETEEIAE 62
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHH 124
YA+KLFSG+VTLYNRTL+FA+SGQDK S TP VP N ME S H
Sbjct: 63 YAVKLFSGLVTLYNRTLKFAISGQDK---PSPAAITPRHH---------VPYNNMESSQH 110
Query: 125 SMRISG----TRHYSSEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSI 174
SM + + H + V H+ N + + NYDYSRRVFGATLD+I
Sbjct: 111 SMGLKTPCRLSAHPVNNAQASSDVLHQPNRNSSQHDGNNYDYSRRVFGATLDNI 164
>gi|30681329|ref|NP_192749.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26453246|dbj|BAC43696.1| unknown protein [Arabidopsis thaliana]
gi|28372886|gb|AAO39925.1| At4g10100 [Arabidopsis thaliana]
gi|332657441|gb|AEE82841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 173
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 128/190 (67%), Gaps = 25/190 (13%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG SN C VYIGN+DE+VS+RVLYDI+IQAGRV+DL+IPRDKETDKPKGFAF EYE+E
Sbjct: 1 MSGTSN--CTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
EIADYA+KLFSG+V+LYNRTL+FA+SGQDK NS+ S ++R + +
Sbjct: 59 EIADYAVKLFSGLVSLYNRTLKFAISGQDKLQSNSAN-----SGHRARPQSLAFEHSDRA 113
Query: 121 ISHHSMRISGTRHYS--------SEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLD 172
HH R S ++EPPPPGV SNG + +YSRRV G+ LD
Sbjct: 114 AYHHLERFSSQLISPPSPLPLDYTQEPPPPGV---SNG-------ASLEYSRRVLGSALD 163
Query: 173 SISRSRSGRY 182
SI+ SR RY
Sbjct: 164 SINHSRPRRY 173
>gi|449447747|ref|XP_004141629.1| PREDICTED: splicing regulator RBM11-like [Cucumis sativus]
Length = 195
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 133/189 (70%), Gaps = 11/189 (5%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG SN+ C VY+GNLDE+VS+RVLYDILIQAGRVVDL+IPRDK+T KPKGFAF YESE
Sbjct: 1 MSGGSNA-CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKDTGKPKGFAFAVYESE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNT-QNSSMTTTPLSSRKSRSDPVPVPVNGM 119
EIA+YA+KLFSG+V+L++R L+FA+SGQDK++ NS++T++ S KSRS
Sbjct: 60 EIANYAVKLFSGLVSLHSRILKFAVSGQDKSSPTNSAITSSSNVSHKSRSHGY-----SN 114
Query: 120 EISHHSMRIS-GTRHYSSEEPPP---PGVTHESNGYETHLNVTNYDYSRRVFGATLDSIS 175
EIS +S +S R Y G+ ++ NGY +HL+ N YS+R GATLDS
Sbjct: 115 EISQYSNHLSTSCRTYPENHVQALLYHGLVNQYNGYGSHLDNYNKKYSQRYHGATLDSFK 174
Query: 176 RSRSGRYNT 184
+ +S Y T
Sbjct: 175 QPKSRCYVT 183
>gi|449447555|ref|XP_004141533.1| PREDICTED: spliceosome-associated protein 49-like [Cucumis sativus]
Length = 168
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 128/186 (68%), Gaps = 27/186 (14%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG SN GC +YIGNLDEKVS+RVLYDILIQAGRVVDL+IPRDKE+ KPKGFAF EYESE
Sbjct: 1 MSGRSN-GCTIYIGNLDEKVSDRVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYESE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV-PVNGM 119
EIA+YA+KLFSG+V L+ RTL+FA+SGQDK + S+ T+ SSR P P N +
Sbjct: 60 EIANYAVKLFSGLVNLHKRTLKFAVSGQDKPSPGSNAITS--SSR------FPTYPENHL 111
Query: 120 EISHHSMRISGTRHYSSEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATLDSISRSRS 179
E + PG+ ++ NGY +HL+ N +YS+R G LDS ++ +S
Sbjct: 112 EALLN-----------------PGLVNQFNGYGSHLDNYNKEYSQRYSGTNLDSFNQPKS 154
Query: 180 GRYNTS 185
R+++S
Sbjct: 155 RRHDSS 160
>gi|115464015|ref|NP_001055607.1| Os05g0427300 [Oryza sativa Japonica Group]
gi|113579158|dbj|BAF17521.1| Os05g0427300 [Oryza sativa Japonica Group]
gi|215692737|dbj|BAG88157.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737792|dbj|BAG96922.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765638|dbj|BAG87335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767778|dbj|BAH00007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631662|gb|EEE63794.1| hypothetical protein OsJ_18618 [Oryza sativa Japonica Group]
Length = 187
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 121/184 (65%), Gaps = 25/184 (13%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME----- 120
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP K P P P M
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP----KVNPIPPPKPAQLMRSSDTP 119
Query: 121 ISHHSM---RISGT---RHYSSEEPPPPGVTHE--SNGYETHLNVTNYDYSRRVFGATLD 172
S H++ RI+G YS+ P G++ SNG Y+YSRRVFG+ L+
Sbjct: 120 ASQHTVVNGRIAGISPNHSYSAHSEAPSGISSRGLSNG--------TYEYSRRVFGSVLN 171
Query: 173 SISR 176
+SR
Sbjct: 172 DVSR 175
>gi|218196836|gb|EEC79263.1| hypothetical protein OsI_20043 [Oryza sativa Indica Group]
Length = 187
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 121/184 (65%), Gaps = 25/184 (13%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME----- 120
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP K P P P M
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP----KLNPIPPPKPAQLMRSSDTP 119
Query: 121 ISHHSM---RISGT---RHYSSEEPPPPGVTHE--SNGYETHLNVTNYDYSRRVFGATLD 172
S H++ RI+G YS+ P G++ SNG Y+YSRRVFG+ L+
Sbjct: 120 ASQHTVVNGRIAGISPNHSYSAHSEAPSGISSRGLSNG--------TYEYSRRVFGSVLN 171
Query: 173 SISR 176
+SR
Sbjct: 172 DVSR 175
>gi|195605172|gb|ACG24416.1| RNA recognition motif-containing protein [Zea mays]
gi|223944379|gb|ACN26273.1| unknown [Zea mays]
gi|413945426|gb|AFW78075.1| RNA recognition motif protein-containing protein [Zea mays]
Length = 190
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 40/193 (20%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHS 125
A+KLFSG+V L+N+TLRFA+SGQDK + N ++ TP + S P P P H
Sbjct: 64 AVKLFSGLVRLHNKTLRFAISGQDKPSLNGNIPVTP----RLNSVPQPKP-------HQP 112
Query: 126 MRISGT----------RHYSSEEPPPPGVTHESNGYETH------------LNVTNYDYS 163
MR S T R+ PP ++ Y+TH L+ Y+YS
Sbjct: 113 MRSSDTPLPQHAAVNGRNAGYGIPP-------NHSYDTHTQALSSGLPNRGLSNGTYEYS 165
Query: 164 RRVFGATLDSISR 176
RRVFG+ L+ +SR
Sbjct: 166 RRVFGSVLNDVSR 178
>gi|195640602|gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]
Length = 190
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 119/193 (61%), Gaps = 40/193 (20%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHS 125
A+KLFSG+ L+N+TLRFA+SGQDK + N ++ TP + S P P P H
Sbjct: 64 AVKLFSGLFRLHNKTLRFAISGQDKPSLNGNIPVTP----RLNSVPQPKP-------HQP 112
Query: 126 MRISGTRHYSSEEPPPP--GVTHESNG--------YETH------------LNVTNYDYS 163
MR SS+ P P V S G Y+TH L+ Y+YS
Sbjct: 113 MR-------SSDTPLPQHTAVNGRSAGYGIPPNHSYDTHTQALSSGLPNRGLSNGTYEYS 165
Query: 164 RRVFGATLDSISR 176
RRVFG+ L+ +SR
Sbjct: 166 RRVFGSVLNDVSR 178
>gi|293336865|ref|NP_001170769.1| uncharacterized protein LOC100384862 [Zea mays]
gi|238007432|gb|ACR34751.1| unknown [Zea mays]
Length = 191
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 118/193 (61%), Gaps = 39/193 (20%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHS 125
AIKLFSG+V L N+TLRFA+SGQDK + N ++ P S P P P H
Sbjct: 64 AIKLFSGLVRLRNKTLRFAISGQDKPSLNGNIPVIP----SLNSVPQPKP------PHQH 113
Query: 126 MRISGTRHYSSEEPPPP--GVTHESNG--------YETH------------LNVTNYDYS 163
MR SS+ P P V+ S G Y+TH L+ Y+YS
Sbjct: 114 MR-------SSDTPLPQHTAVSGRSAGYGISQNHSYDTHTQAPSSGLPSRGLSNGTYEYS 166
Query: 164 RRVFGATLDSISR 176
RRVFG+ L+ +SR
Sbjct: 167 RRVFGSVLNDVSR 179
>gi|46391132|gb|AAS90659.1| putative galactosyltransferase [Oryza sativa Japonica Group]
Length = 534
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 89/110 (80%), Gaps = 6/110 (5%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP + +P+P P
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP------KVNPIPPP 107
>gi|215704644|dbj|BAG94272.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 161
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 89/110 (80%), Gaps = 6/110 (5%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLDEKV ERVLY+ILIQ GRVVDL+IPRDKET++ KG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKETNRSKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
A+KLFSG+V L+NRTLRFA+SGQDK + N ++ TP + +P+P P
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTP------KVNPIPPP 107
>gi|194696904|gb|ACF82536.1| unknown [Zea mays]
gi|195620946|gb|ACG32303.1| hypothetical protein [Zea mays]
gi|413945425|gb|AFW78074.1| hypothetical protein ZEAMMB73_201613 [Zea mays]
Length = 176
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 93/126 (73%), Gaps = 11/126 (8%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHS 125
A+KLFSG+V L+N+TLRFA+SGQDK + N ++ TP + S P P P H
Sbjct: 64 AVKLFSGLVRLHNKTLRFAISGQDKPSLNGNIPVTP----RLNSVPQPKP-------HQP 112
Query: 126 MRISGT 131
MR S T
Sbjct: 113 MRSSDT 118
>gi|357133580|ref|XP_003568402.1| PREDICTED: probable beta-1,3-galactosyltransferase 8-like
[Brachypodium distachyon]
Length = 528
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 89/109 (81%), Gaps = 6/109 (5%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLDEKV ERVLY+IL+Q G VVDL+IPRDKET++ +G+AF EYE+EEIA Y
Sbjct: 4 NPGCAVFIGNLDEKVPERVLYEILVQVGHVVDLHIPRDKETNRGRGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
A+KLFSG+V L+NRTLRFA+SGQDK + N++M TP + +P+P+
Sbjct: 64 AVKLFSGLVRLHNRTLRFAISGQDKPSSNANMPVTP------KMNPIPL 106
>gi|449482315|ref|XP_004156245.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 187
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 88/99 (88%), Gaps = 1/99 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG SN+ C VY+GNLDE+VS+RVLYDILIQAGRVVDL+IPRDK+T KPKGFAF YESE
Sbjct: 1 MSGGSNA-CTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKDTGKPKGFAFAVYESE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTT 99
EIA+YA+KLFSG+V+L++R L+FA+SGQDK++ +S T
Sbjct: 60 EIANYAVKLFSGLVSLHSRILKFAVSGQDKSSPTNSAIT 98
>gi|56784854|dbj|BAD82094.1| galactosyltransferase-like protein [Oryza sativa Japonica Group]
Length = 204
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 110/191 (57%), Gaps = 33/191 (17%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGNLDEKV+ER+LY+ILIQ GRVVDL IPRDKET PKG+AF EYE+EEIA YA++LF
Sbjct: 9 VYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQLF 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSMRI-- 128
SG+V LY +TL+FA+SGQDK + N + P + +PVP+P + H M +
Sbjct: 69 SGLVRLYGKTLKFAISGQDKPSSNGNNPVMP------KLNPVPLPKQPQFVHHSDMHVLH 122
Query: 129 --------SGTRHY---------SSEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATL 171
GTR Y ++ + P G H G+ YD S +FG
Sbjct: 123 TPADPMVNGGTRDYGFSNYYPYSANPQALPVGPVHSYRGFSN----GTYDCSTCIFG--- 175
Query: 172 DSISRSRSGRY 182
SI R G Y
Sbjct: 176 -SIVNGRYGDY 185
>gi|4538975|emb|CAB39763.1| putative protein [Arabidopsis thaliana]
gi|7267707|emb|CAB78134.1| putative protein [Arabidopsis thaliana]
Length = 147
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 104/162 (64%), Gaps = 23/162 (14%)
Query: 29 LIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLRFALSGQ 88
+IQAGRV+DL+IPRDKETDKPKGFAF EYE+EEIADYA+KLFSG+V+LYNRTL+FA+SGQ
Sbjct: 1 MIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEIADYAVKLFSGLVSLYNRTLKFAISGQ 60
Query: 89 DKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSMRISGTRHYS--------SEEPP 140
DK NS+ S ++R + + HH R S ++EPP
Sbjct: 61 DKLQSNSAN-----SGHRARPQSLAFEHSDRAAYHHLERFSSQLISPPSPLPLDYTQEPP 115
Query: 141 PPGVTHESNGYETHLNVTNYDYSRRVFGATLDSISRSRSGRY 182
PPGV SNG + +YSRRV G+ LDSI+ SR RY
Sbjct: 116 PPGV---SNG-------ASLEYSRRVLGSALDSINHSRPRRY 147
>gi|125572836|gb|EAZ14351.1| hypothetical protein OsJ_04272 [Oryza sativa Japonica Group]
Length = 421
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 87/119 (73%), Gaps = 6/119 (5%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
VYIGNLDEKV+ER+LY+ILIQ GRVVDL IPRDKET PKG+AF EYE+EEIA YA++L
Sbjct: 8 TVYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQL 67
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSMRI 128
FSG+V LY +TL+FA+SGQDK + N + P + +PVP+P + H M +
Sbjct: 68 FSGLVRLYGKTLKFAISGQDKPSSNGNNPVMP------KLNPVPLPKQPQFVHHSDMHV 120
>gi|326498389|dbj|BAJ98622.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510879|dbj|BAJ91787.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 84/110 (76%), Gaps = 6/110 (5%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N C+VY+GNLDE V ERVLY+ILIQAG VVDL+IP DKET +PKGFAF EYE+E IA Y
Sbjct: 4 NPACSVYVGNLDENVPERVLYEILIQAGHVVDLHIPCDKETGRPKGFAFAEYETEAIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
A++LFSG+V L +TL+FALSGQDK + N ++ P + +P+P+P
Sbjct: 64 AVRLFSGLVRLNGKTLKFALSGQDKPSSNGNIPVMP------KLNPIPLP 107
>gi|357126157|ref|XP_003564755.1| PREDICTED: uncharacterized protein LOC100841208 [Brachypodium
distachyon]
Length = 205
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 112/189 (59%), Gaps = 24/189 (12%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ N N VY+GNLDEKVSERVLY+ILIQAG VVDL++P DKET +PKGFAFVEYE+E
Sbjct: 1 MARNPNRA--VYVGNLDEKVSERVLYEILIQAGHVVDLHVPHDKETGRPKGFAFVEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
EIA YA+ LFSG+V L +TL+FA+SGQDK + N + P + P+ +P
Sbjct: 59 EIAHYAVDLFSGLVRLNGKTLKFAMSGQDKPSSNGTNPVMP------KLIPIALPKQPQF 112
Query: 121 ISHHSMRISGTRHYS--SEEPPPPGVTHESNGYET------------HLNVTN--YDYSR 164
+ M + Y + P G +H Y+ H +T+ YDYSR
Sbjct: 113 VHCSDMPVLHKPAYPVVNGRIPDYGFSHNYYPYDAYPQALPARPVHDHRQLTHGMYDYSR 172
Query: 165 RVFGATLDS 173
VFG+ L++
Sbjct: 173 SVFGSVLNA 181
>gi|125528572|gb|EAY76686.1| hypothetical protein OsI_04641 [Oryza sativa Indica Group]
Length = 214
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 87/121 (71%), Gaps = 6/121 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGNLDEKV+ER+LY+ILIQ GRVVDL IPRDKET KG+AF EYE+EEIA YA++LF
Sbjct: 9 VYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCLKGYAFAEYETEEIAQYAVQLF 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSMRISG 130
SG+V LY +TL+FA+SGQDK + N + P + +PVP+P + H M +
Sbjct: 69 SGLVRLYGKTLKFAISGQDKPSSNGNNPVMP------KLNPVPLPKQPQFVHHSDMHVLH 122
Query: 131 T 131
T
Sbjct: 123 T 123
>gi|116789097|gb|ABK25115.1| unknown [Picea sitchensis]
gi|224284110|gb|ACN39792.1| unknown [Picea sitchensis]
gi|224285790|gb|ACN40610.1| unknown [Picea sitchensis]
gi|294464481|gb|ADE77751.1| unknown [Picea sitchensis]
Length = 206
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 102/144 (70%), Gaps = 11/144 (7%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M GN S ++IGNLD++V ERVLY+++IQAG +VDLYIPRDKET++ KG+AF EYE+E
Sbjct: 1 MPGNPLS--TLFIGNLDDRVDERVLYEVMIQAGPLVDLYIPRDKETNRHKGYAFAEYETE 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP-VNGM 119
E+A YAIKLFSG+V L+N+ +RFA+SGQDK+ Q T +S+ S+ P+ P V+G
Sbjct: 59 EVAQYAIKLFSGLVCLHNKFVRFAISGQDKSPQ----TQIAVSASPSQRPPIQSPIVSGK 114
Query: 120 EISHHSM----RISGTRHYSSEEP 139
++ S+ +++ +RH P
Sbjct: 115 QMPPPSLPSPIQVNSSRHLPYHSP 138
>gi|297598038|ref|NP_001044970.2| Os01g0876500 [Oryza sativa Japonica Group]
gi|255673918|dbj|BAF06884.2| Os01g0876500 [Oryza sativa Japonica Group]
Length = 100
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 74/84 (88%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGNLDEKV+ER+LY+ILIQ GRVVDL IPRDKET PKG+AF EYE+EEIA YA++LF
Sbjct: 9 VYIGNLDEKVTERILYEILIQPGRVVDLCIPRDKETSCPKGYAFAEYETEEIAQYAVQLF 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQN 94
SG+V LY +TL+FA+SGQDK + N
Sbjct: 69 SGLVRLYGKTLKFAISGQDKPSSN 92
>gi|413945429|gb|AFW78078.1| hypothetical protein ZEAMMB73_201613, partial [Zea mays]
gi|413945430|gb|AFW78079.1| hypothetical protein ZEAMMB73_201613, partial [Zea mays]
Length = 147
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 72/80 (90%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEIA Y
Sbjct: 59 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 118
Query: 66 AIKLFSGIVTLYNRTLRFAL 85
A+KLFSG+V L+N+TLRFA+
Sbjct: 119 AVKLFSGLVRLHNKTLRFAV 138
>gi|242055165|ref|XP_002456728.1| hypothetical protein SORBIDRAFT_03g041520 [Sorghum bicolor]
gi|241928703|gb|EES01848.1| hypothetical protein SORBIDRAFT_03g041520 [Sorghum bicolor]
Length = 442
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 93/137 (67%), Gaps = 8/137 (5%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLDEK+SERVLY+ILIQAG VVDL++P DKE++ KG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDEKLSERVLYEILIQAGHVVDLHVPSDKESNSRKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK--NTQNSSMTTTPLSSRKS------RSDPVPVPVN 117
A++LFSG+V + +TL+F ++G DK + N+S+ P+ S + +P+P+P
Sbjct: 64 AVRLFSGLVRINGKTLKFVIAGHDKPSSNDNNSVMLNPVPSSNGNNPVMPKLNPIPLPKQ 123
Query: 118 GMEISHHSMRISGTRHY 134
+ M +S T Y
Sbjct: 124 TQILHCCDMPVSRTPAY 140
>gi|212721594|ref|NP_001131930.1| uncharacterized protein LOC100193321 [Zea mays]
gi|194692948|gb|ACF80558.1| unknown [Zea mays]
Length = 92
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 72/80 (90%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V+IGNLD+KV ERVLY+ILIQ GRVVDL+IPRDKET +PKG+AF EYE+EEIA Y
Sbjct: 4 NPGCTVFIGNLDDKVPERVLYEILIQVGRVVDLHIPRDKETSRPKGYAFAEYETEEIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFAL 85
A+KLFSG+V L+N+TLRFA+
Sbjct: 64 AVKLFSGLVRLHNKTLRFAV 83
>gi|413951767|gb|AFW84416.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 167
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 91/132 (68%), Gaps = 8/132 (6%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V+IGNLDEKVSER+LY+ILIQAG VVDL++P DKE++ KG+AFVEYE+EEIA YA+KLF
Sbjct: 9 VFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVKLF 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQ--NSSMTTTPLSSRKS------RSDPVPVPVNGMEIS 122
SG+V + +TL+F ++G DK + N+S+ P+ S + +P+P+P +
Sbjct: 69 SGLVRISGKTLKFMIAGYDKPSSNVNTSVMLNPVPSSNGNNPVTPKLNPIPLPKQTQIMC 128
Query: 123 HHSMRISGTRHY 134
M +S T Y
Sbjct: 129 CSDMPVSRTLAY 140
>gi|413951768|gb|AFW84417.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 114
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 78/96 (81%), Gaps = 2/96 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V+IGNLDEKVSER+LY+ILIQAG VVDL++P DKE++ KG+AFVEYE+EEIA YA+KLF
Sbjct: 9 VFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVKLF 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQ--NSSMTTTPLSS 104
SG+V + +TL+F ++G DK + N+S+ P+ S
Sbjct: 69 SGLVRISGKTLKFMIAGYDKPSSNVNTSVMLNPVPS 104
>gi|414879437|tpg|DAA56568.1| TPA: hypothetical protein ZEAMMB73_352812 [Zea mays]
Length = 114
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 74/94 (78%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N G V+IGNLDEKVSERVLY+ILIQAG VV L++P +KE++ KG+AF EYE+E+IA Y
Sbjct: 4 NPGRTVFIGNLDEKVSERVLYEILIQAGHVVGLHVPSNKESNSRKGYAFAEYETEDIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTT 99
A++LFSG+V + +TL+F ++G DK + N + +
Sbjct: 64 AVRLFSGLVRINGKTLKFVIAGHDKPSSNDNKSV 97
>gi|302800269|ref|XP_002981892.1| hypothetical protein SELMODRAFT_421400 [Selaginella
moellendorffii]
gi|300150334|gb|EFJ16985.1| hypothetical protein SELMODRAFT_421400 [Selaginella
moellendorffii]
Length = 431
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 67/87 (77%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+ NLD++V ERVLYDI++QAG +V++YIPRDKET + +G+ F EYESEE A Y
Sbjct: 5 NVDATLYVSNLDDRVDERVLYDIMVQAGPLVEVYIPRDKETKRHRGYGFAEYESEESASY 64
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A++LFSG+VTL+NR + FA SG K
Sbjct: 65 ALRLFSGLVTLHNRPVNFAFSGGAKKV 91
>gi|302808636|ref|XP_002986012.1| hypothetical protein SELMODRAFT_425016 [Selaginella
moellendorffii]
gi|300146160|gb|EFJ12831.1| hypothetical protein SELMODRAFT_425016 [Selaginella
moellendorffii]
Length = 442
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 67/87 (77%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+ NLD++V ERVLYDI++QAG +V++YIPRDKET + +G+ F EYESEE A Y
Sbjct: 5 NVDATLYVSNLDDRVDERVLYDIMVQAGPLVEVYIPRDKETKRHRGYGFAEYESEESASY 64
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A++LFSG+VTL+NR + FA SG K
Sbjct: 65 ALRLFSGLVTLHNRPVNFAFSGGAKKV 91
>gi|226508654|ref|NP_001151528.1| LOC100285162 [Zea mays]
gi|195647430|gb|ACG43183.1| RNA recognition motif-containing protein [Zea mays]
Length = 110
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 66/80 (82%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N G V+IGNLDEKVSERVLY+ILIQAG VV L++P +KE++ KG+AF EYE+E+IA Y
Sbjct: 4 NPGRTVFIGNLDEKVSERVLYEILIQAGHVVGLHVPSNKESNSHKGYAFAEYETEDIAQY 63
Query: 66 AIKLFSGIVTLYNRTLRFAL 85
A++LFSG+V + +TL+F +
Sbjct: 64 AVRLFSGLVRINGKTLKFVV 83
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD ++SE +L+++ +QAG VV++Y+P+D+ T++ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF FV YES E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD ++SE +L+++ +QAG VV++Y+P+D+ T++ +G+ FVE+ SEE ADY
Sbjct: 22 NQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADY 81
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF FV Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF FV Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF FV Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD ++ E +L+++ +QAG VV++Y+P+D+ T++ +G+ FVE+ SEE ADY
Sbjct: 22 NQDATAYVGNLDPQICEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADY 81
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDSA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKTLN-MIKLYGKPIRVNKASQDKKS 107
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF FV YES E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKIMN-MIKLFGKPIRVNKASQDKKS 107
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++L+D G +V + I RD ET +GF F+ Y+S + +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAA 170
Query: 67 IKLFSGIVTLYNRTL 81
I+ +G L NR +
Sbjct: 171 IEAMNGQY-LCNRQI 184
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MLKLYGKPIRVNKASQDKKS 107
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++LYD G +V + I RD ET +GF FV Y+S E +D A
Sbjct: 111 GANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V E++LYD G +V + I RD +T +GF FV Y+S E +D A
Sbjct: 111 GANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ F+E+ SEE ADY
Sbjct: 22 NQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADY 81
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKILN-MLKLYGKPIRVNKASQDKKS 107
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++LYD G +V + I RD ET +GF FV Y+S E +D A
Sbjct: 111 GANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQA 170
Query: 67 IK 68
I+
Sbjct: 171 IE 172
>gi|325186713|emb|CCA21261.1| RNA polymerase Ispecific transcription initiation factor rrn3
putative [Albugo laibachii Nc14]
Length = 988
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD+KVSE +L+++++QAG VV++++PRDK T + + FVE+ +EE A+Y
Sbjct: 714 NQDATIYIGNLDDKVSEELLWELMLQAGSVVNVHMPRDKVTTNHQNYGFVEFRTEECAEY 773
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ +Y + +R + QDK T
Sbjct: 774 AIKIMN-MIQVYGKPIRVKKASQDKKT 799
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++LYD G +++ I RD +T +GF F+ +++ E +D A
Sbjct: 803 GANLFIGNLDPEVDEKLLYDTFSAFGGIIETPKIMRDPDTKHSRGFGFISFDAFEASDLA 862
Query: 67 IKLFSGIVTLYNRTL--RFALSGQDKNTQNSSMTTTPLS-SRKSRSDP-------VPVPV 116
I+ + L NR + ++A N ++ S L+ S ++ P +P +
Sbjct: 863 IECMNA-QYLCNRQIVVQYAFKKDSNNERHGSQAERLLAQSNPNKLKPHTRFAFAMPDGM 921
Query: 117 NGM----EISHHS--MRISGTRH----YSSEEPPPPGVTHESNGY 151
NGM HH M GT PPPP + GY
Sbjct: 922 NGMLGMQPPQHHMGYMTQPGTMQSNMGVMGMVPPPPTPMSVAAGY 966
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N VY+GNLD ++SE +++++ +Q+G VV++Y+P+D+ T + +G+ FVE++SE+ A
Sbjct: 24 DRNQDATVYVGNLDVQLSEELVWELFVQSGPVVNVYLPKDRVTSQHQGYGFVEFKSEDDA 83
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
DYAIK+ + ++ +Y + +R + QDK TQ+
Sbjct: 84 DYAIKILN-MIKVYGKPIRVNKASQDKKTQD 113
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGN+D V E++LYD G ++ I RD ET KGF FV Y+S E +D A
Sbjct: 115 GANLFIGNIDPDVDEKLLYDTFSAFGMIIQTPKIMRDPETGATKGFGFVSYDSFEASDAA 174
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRK 106
I+ +G L NR T+ FA K ++ S L++++
Sbjct: 175 IEAMNGQF-LCNRPITVSFAYKKDTKGERHGSEAERQLATQQ 215
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ F+E+ SE+ ADY
Sbjct: 22 NQDATAYVGNLDSQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEDDADY 81
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ LY + +R + QDK +
Sbjct: 82 AIKILN-MIKLYGKPIRVNKASQDKKS 107
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V E++LYD G +V + I RD ++ +GF F+ Y+S E +D A
Sbjct: 111 GANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSA 170
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSS 104
I+ +G L NR T+ +A K ++ ++ L+S
Sbjct: 171 IEAMNGQY-LCNRAITVSYAYKKDTKGERHGTLAERMLAS 209
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ LY + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLYGKPIRVNKASQDKKS 107
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V E++LYD G +V + I RD +T +GF FV Y+S E +D A
Sbjct: 111 GANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IEAMNG 176
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
NS +Y+G LD+KV++ VL+++ Q G V+++++PRDK T + +G+ FVEY++EE ADY
Sbjct: 9 NSDATLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQGYGFVEYKTEEDADY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQ 93
AIK+ ++ LY + ++ + QDK TQ
Sbjct: 69 AIKILH-LIKLYGKPIKVNKASQDKRTQ 95
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD V+E L + G ++ I RD + ++ KG+AF+ Y++ E +D AI
Sbjct: 98 GANIFIGNLDPSVTEMQLQETFSTFGLIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAI 157
Query: 68 KLFSG 72
+G
Sbjct: 158 SAMNG 162
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLD KV+E +++++ +Q G +V+++IPRDK T++ G+ FVE+++EE ADY
Sbjct: 17 NQEATLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQ 93
AIK+ +V L+ + ++ + QDK TQ
Sbjct: 77 AIKIMH-MVKLFGKPIKVNKASQDKRTQ 103
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G NV++GNL E V E++L D+ G V+ I RD ET K + FV Y++ E +D +I
Sbjct: 106 GANVFVGNLHEDVDEKMLRDVFSSFGIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASI 165
Query: 68 KLFSG 72
+ +G
Sbjct: 166 QAMNG 170
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD+KV++ +++++ IQ G VV+++IP+DK + + +G+ FVE++SEE ADY
Sbjct: 16 NQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADY 75
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQ 93
AIK+ ++ LY + ++ + QDK TQ
Sbjct: 76 AIKIMH-MIKLYGKPIKVNKASQDKRTQ 102
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD ++ E+ LY+ G ++ I R+ ET KG+ FV Y++ E +D A+
Sbjct: 105 GANLFIGNLDTEIDEKTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGAL 164
Query: 68 KLFSG 72
+G
Sbjct: 165 TAMNG 169
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD +VSE +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE ADY
Sbjct: 3 NQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADY 62
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ LY + +R + QDK +
Sbjct: 63 AIKVLN-MIKLYGKPIRVNKASQDKKS 88
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++L+D G +V + I RD ET +GF F+ Y+S E +D A
Sbjct: 92 GANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAA 151
Query: 67 IKLFSG 72
I+ +G
Sbjct: 152 IEAMNG 157
>gi|84995240|ref|XP_952342.1| splicing factor 3b subunit 4 [Theileria annulata strain Ankara]
gi|65302503|emb|CAI74610.1| splicing factor 3b subunit 4, putative [Theileria annulata]
Length = 290
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N N +YIGNLD + E +L++ +QAGRV + IPRDK T + +GF FVEYE+E A
Sbjct: 13 NRNQEATLYIGNLDLQADEELLWEFFMQAGRVKSINIPRDKVTGQHQGFGFVEYETETDA 72
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDK 90
DYA+K+ + V LY++ L+ + +DK
Sbjct: 73 DYALKILN-FVKLYHKPLKLNKASKDK 98
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD++V ER+L+D GRV+ + R + + K +A V ++ E +D A+
Sbjct: 104 GAKLFVGNLDDEVDERLLHDTFSAFGRVLSAKLVRSETSG--KTYAIVSFDDFEASDAAL 161
Query: 68 KLFSG 72
+ +G
Sbjct: 162 RTMNG 166
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N VY+GNLD ++SE +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ ++ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKVHGKPIRVNKASQDKKS 107
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G + + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSS-----MTTTPLSSRKSR 108
I+ +G L NR T+ +A K ++ + + T S++KSR
Sbjct: 171 IEAMTGQY-LSNRQITVSYAYKKDTKGERHGTPAERLLAATNPSAQKSR 218
>gi|429327508|gb|AFZ79268.1| spliceosome associated protein, putative [Babesia equi]
Length = 311
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GN+D +V E +L+++ IQAG V +++IPRDK T + +G+ FVE+E+E+ ADY
Sbjct: 15 NQEATLYVGNVDMQVDEELLWELFIQAGVVKNIHIPRDKVTGQHQGYGFVEFETEDDADY 74
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+++ + V LYN+ LR + +DK
Sbjct: 75 AVRILN-FVKLYNKPLRLNKASRDK 98
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N G N++IGN+DE+V E++L+D G V+ I RD ++ +AFV Y+S E +
Sbjct: 100 NIEVGANLFIGNVDEEVDEKLLHDTFSAFGNVLLTKIVRDIDSAGRNAYAFVSYDSFEAS 159
Query: 64 DYAIKLFSG 72
D A+ +G
Sbjct: 160 DAALAAMNG 168
>gi|323451637|gb|EGB07513.1| hypothetical protein AURANDRAFT_59062 [Aureococcus
anophagefferens]
Length = 350
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLDE+++E +L+++++QAG + ++++PRDK T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATCYVGNLDEQLTEELLWEMMLQAGPIGNVHLPRDKVTGSHQGYGFVEFRSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A+K+ + +V L+ + LR + QDK T
Sbjct: 70 ALKVMN-MVKLFGKPLRVNKASQDKKT 95
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++G LD V E++LYD G + + I RD +T KGF FV Y+S E +D A
Sbjct: 99 GANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLA 158
Query: 67 IK 68
I+
Sbjct: 159 IE 160
>gi|147840632|emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N Y+GNLD +V+E +L+++ +QAG VV++Y+P+D+ T+ +G+ FVE+ SEE
Sbjct: 18 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLR 82
ADYAIK+ + ++ LY + +R
Sbjct: 78 DADYAIKVLN-MIKLYGKPIR 97
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N VY+G LD ++SE +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLHGKPIRVNKASQDKKS 107
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G + + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IESMTG 176
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N VY+G LD ++SE +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLHGKPMRVNKASQDKKS 107
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G + + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IESMTG 176
>gi|307110375|gb|EFN58611.1| hypothetical protein CHLNCDRAFT_10145, partial [Chlorella
variabilis]
Length = 329
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S + N Y+GN+D + +E +++++ +QAG VV++Y+P+D+ T++ + + FVE+ SEE
Sbjct: 15 SADRNQEATCYVGNIDPQANEELIWELFVQAGPVVNVYLPKDRVTNEHQSYGFVEFRSEE 74
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
ADYAIK+ + +V +Y + LR + QD+NT +
Sbjct: 75 DADYAIKILN-MVKVYGKPLRVNKAAQDRNTAD 106
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIA 63
++ G N++IG LD +V E++LYD G +V + I RD +T KGF F+ ++S E +
Sbjct: 105 ADVGANLFIGGLDPEVDEKLLYDTFSAFGVIVNNPKIMRDPDTGLTKGFGFLSFDSFEAS 164
Query: 64 DYAIKLFSGIVTLYNRTL 81
D A++ +G L NR L
Sbjct: 165 DAALEAMNG-QYLMNRPL 181
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
gi|4218014|gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana]
gi|23297611|gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana]
gi|330251682|gb|AEC06776.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
Length = 363
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S N VY+G LD ++SE +L+++ +QAG VV++Y+P+D+ T+ + + F+EY SEE
Sbjct: 18 SAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEE 77
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
ADYAIK+ + ++ L+ + +R + QDK +
Sbjct: 78 DADYAIKVLN-MIKLHGKPIRVNKASQDKKS 107
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G + + I RD +T +GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ +G
Sbjct: 171 IESMTG 176
>gi|71030596|ref|XP_764940.1| spliceosome associated protein [Theileria parva strain Muguga]
gi|68351896|gb|EAN32657.1| spliceosome associated protein, putative [Theileria parva]
Length = 290
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N N +YIGNLD + E +L++ +QAGRV + +PRDK T + +GF FVEYE+E A
Sbjct: 13 NRNQEATLYIGNLDLQADEELLWEFFMQAGRVKSINVPRDKVTGQHQGFGFVEYETEVDA 72
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDK 90
DYA+K+ + V LY++ L+ + +DK
Sbjct: 73 DYALKILN-FVKLYHKPLKLNKASKDK 98
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD++V ER+L+D GRV+ + R + + K +A V ++ E +D A+
Sbjct: 104 GAKLFVGNLDDEVDERLLHDTFSAFGRVLSAKMVRSETSG--KTYAIVSFDDFEASDAAL 161
Query: 68 KLFSG 72
+ +G
Sbjct: 162 RTMNG 166
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I +D +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMQDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|340382462|ref|XP_003389738.1| PREDICTED: hypothetical protein LOC100632716 [Amphimedon
queenslandica]
Length = 433
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE VL+++ +QAG VV+++IPRD+ T +G+ FVE+ E+ ADY
Sbjct: 10 NQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD ++ E++LYDI G ++ I RD ++ KGFAFV + S + +D A
Sbjct: 99 GANLFIGNLDPEIDEKMLYDIFSAFGVILQAPKIMRDVDSGGSKGFAFVNFASFDASDAA 158
Query: 67 IKLFSG 72
I+ +G
Sbjct: 159 IEAMNG 164
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan
troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|67540662|ref|XP_664105.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4]
gi|40738651|gb|EAA57841.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4]
gi|259480068|tpe|CBF70863.1| TPA: splicing factor 3b subunit 4 (AFU_orthologue; AFUA_6G05180)
[Aspergillus nidulans FGSC A4]
Length = 352
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+VS+ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVSDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G +V+L + RD +++ KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLVNLPKVARD-DSNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGM 119
I +G + + ++++A K ++ L++ ++R V VP +
Sbjct: 159 IANMNGQYLMNKQVSVQYAYKKDGKGERHGDQAERMLAA-QARKHNVQVPTQAL 211
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D AI+ +G
Sbjct: 155 SDAAIEAMNG 164
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++I NLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIENLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ ++ LY + +R
Sbjct: 70 AIKIMD-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 4 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 63
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 64 AIKIMN-MIKLYGKPIR 79
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 89 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 148
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 149 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 196
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4
[Felis catus]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKN 91
AIK+ + ++ LY + +R S +KN
Sbjct: 70 AIKIMN-MIKLYGKPIRVNKASAHNKN 95
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ Y S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINYASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius
multifiliis]
Length = 267
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G +D+KV++ VL+++ Q G VV++++P+DK T + +G+ FVE++SEE ADY
Sbjct: 9 NPDATIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQ 93
+IK+ +V LY + ++ + QDK TQ
Sbjct: 69 SIKIMH-LVKLYGKPIKVNKASQDKRTQ 95
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD+ ++E+ L+D Q G ++ I RD + D+ KG+AFV Y++ E AD AI
Sbjct: 98 GANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAI 157
Query: 68 KLFSGIVTLYNRT-LRFALSGQDKNTQNSSMTTTPLSSRKSRSD------PVPVPVNGME 120
+G + +++A K ++ S L++ K + VPVP+
Sbjct: 158 NTMNGQFFGSKKINVQYAFKKDSKGERHGSAAERLLAANKPQQQNTVVGHAVPVPLVQKP 217
Query: 121 ISHH---SMRISGTRHYSSEEPPP 141
I + S+ I+ ++ PPP
Sbjct: 218 IVNRIPDSLMINNQLPVPNQMPPP 241
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis
carolinensis]
Length = 417
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEALLWELFLQAGPVVNTHMPKDRVTQAHQGYGFVEFMSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD ET KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITISYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 8 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 67
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 68 AIKIMN-MIKLYGKPIR 83
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 93 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 152
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 153 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 200
>gi|441636543|ref|XP_004093131.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4
[Nomascus leucogenys]
Length = 372
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKN 91
AIK+ + ++ LY + +R S +KN
Sbjct: 70 AIKIMN-MIKLYGKPIRVNKASAHNKN 95
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLD +V+E +++++ +QAG VV++Y+P+D+ ++ +G+AFVEY EE ADY
Sbjct: 28 NQEATVYVGNLDPQVTEEIVWEVFVQAGPVVNVYMPKDRVSNAHQGYAFVEYRGEEDADY 87
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
AIK+ + ++ L+ + +R + DK + +
Sbjct: 88 AIKVLN-MIKLFGKPIRANKASVDKKSTD 115
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIA 63
++ G N+++GNLD + E++LYD G V+ I RD +T +GF FV Y+S E +
Sbjct: 114 TDVGANLFVGNLDPDMDEKLLYDTFSAFGVVITTPKIMRDPDTGNSRGFGFVSYDSFEAS 173
Query: 64 DYAIKLFSG 72
D AI+ +G
Sbjct: 174 DAAIEAMNG 182
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ Y S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINYASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|403221974|dbj|BAM40106.1| splicing factor 3b subunit 4 [Theileria orientalis strain
Shintoku]
Length = 326
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD + E +L++ +QAGRV + IPRDK T + +GF FVEYE+E ADY
Sbjct: 15 NQEATLYIGNLDIQADEELLWEFFMQAGRVRSINIPRDKVTGQHQGFGFVEYETETDADY 74
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+++ + + LY++ LR + +DK
Sbjct: 75 ALRILN-FIKLYHKPLRLNKASKDK 98
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N+ G N++IGN+D++V E++L+D G VV I RD E + + +AFV +++ E +
Sbjct: 100 NTEIGANLFIGNIDDEVDEKLLHDTFSAFGTVVFTKIVRD-EANSGRSYAFVSFDNFESS 158
Query: 64 DYAIKLFSG 72
D A+ +G
Sbjct: 159 DAALASMNG 167
>gi|296424721|ref|XP_002841895.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638146|emb|CAZ86086.1| unnamed protein product [Tuber melanosporum]
Length = 392
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+VS+ +++++++QAGR+V++++P+D+ T +GF FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVSDALVWELMLQAGRIVNVHLPKDRVTQTHQGFGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V E+ L+D G +V I RD + KGF F+ Y+S E +D A
Sbjct: 100 GAELFVGNLDPMVDEKTLFDTFTTFGNLVSAPKIARDDQGIS-KGFGFISYDSFEASDKA 158
Query: 67 IK 68
I+
Sbjct: 159 IE 160
>gi|340381114|ref|XP_003389066.1| PREDICTED: splicing factor 3B subunit 4-like [Amphimedon
queenslandica]
Length = 364
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE VL+++ +QAG VV+++IPRD+ T +G+ FVE+ E+ ADY
Sbjct: 10 NQDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD ++ E++LYDI G ++ I RD ++ KGFAFV + S + +D A
Sbjct: 99 GANLFIGNLDPEIDEKMLYDIFSAFGVILQAPKIMRDVDSGGSKGFAFVNFASFDASDAA 158
Query: 67 IKLFSG 72
I+ +G
Sbjct: 159 IEAMNG 164
>gi|156088689|ref|XP_001611751.1| RNA recognition motif domaining containing protein [Babesia bovis]
gi|154799005|gb|EDO08183.1| RNA recognition motif domaining containing protein [Babesia bovis]
Length = 280
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N +Y+GN+D +V E +L++ +Q G V L+IPRDK T +G+AFVE+++++ A
Sbjct: 13 DRNQEATLYVGNVDTQVDEELLWEFFVQVGPVKHLHIPRDKVTGHHQGYAFVEFDTDDDA 72
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
DYAI++ + V LYN+ LR + +DK T
Sbjct: 73 DYAIRILN-FVKLYNKPLRLNKASRDKQT 100
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD V ++ L+D G V+ + RD + K FAFV Y+S E +D A+
Sbjct: 104 GANLFIGNLDPDVDDKQLHDTFASFGNVISANVVRDGDATDRKAFAFVSYDSFEASDAAL 163
Query: 68 KLFSG 72
+G
Sbjct: 164 AAMNG 168
>gi|440797982|gb|ELR19056.1| spliceosomal protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 316
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LD +VSE +L+++++Q+G VV++YIP+DK T+ +G+ FVE+ +EE A+Y
Sbjct: 8 NQDATVYVGELDSRVSEALLWELMLQSGPVVNVYIPKDKLTNLHQGYGFVEFATEEDAEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+ + ++ LY + LR + +D T
Sbjct: 68 AIKIMN-MIKLYGKPLRVNKAKRDGKT 93
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++LYD G ++ I RD ET + +GF FV ++S E +D A
Sbjct: 97 GANLFIGNLDAEVDEKLLYDTFSAFGVIITTPKIMRDPETGESRGFGFVSFDSFESSDAA 156
Query: 67 IK 68
I+
Sbjct: 157 IE 158
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|238493972|ref|XP_002378222.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
gi|317148789|ref|XP_001822912.2| spliceosome-associated protein 49 [Aspergillus oryzae RIB40]
gi|220694872|gb|EED51215.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
Length = 354
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLY+ + G +++L I RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYNTFSRFGNLINLPKIARD-DNNLSKGYGFVSFGDFESSDAA 158
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSR------SDPVPVPVNG 118
I +G + + ++++A K ++ L+++ + + P+P P +G
Sbjct: 159 IANMNGQYLMNKQVSVQYAYKKDGKGERHGDQAERMLAAQARKHNVRPPTQPLPSPFSG 217
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|145250071|ref|XP_001396549.1| spliceosome-associated protein 49 [Aspergillus niger CBS 513.88]
gi|134082060|emb|CAK42179.1| unnamed protein product [Aspergillus niger]
gi|350636041|gb|EHA24401.1| hypothetical protein ASPNIDRAFT_56267 [Aspergillus niger ATCC
1015]
Length = 351
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G +V++ I RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLVNIPKIARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 ITNMNG 164
>gi|358375675|dbj|GAA92254.1| splicing factor 3b subunit 4 [Aspergillus kawachii IFO 4308]
Length = 352
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G +V++ I RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLVNIPKIARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 ITNMNG 164
>gi|159163578|pdb|1X5U|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 3b
Length = 105
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 13 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 72
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKNTQNSS 96
AIK+ ++ LY + +R S +KN S
Sbjct: 73 AIKIMD-MIKLYGKPIRVNKASAHNKNLSGPS 103
>gi|425773760|gb|EKV12094.1| Splicing factor 3b subunit 4 [Penicillium digitatum PHI26]
gi|425782322|gb|EKV20241.1| Splicing factor 3b subunit 4 [Penicillium digitatum Pd1]
Length = 366
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+VS+ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA K
Sbjct: 13 ATVYIGNLDERVSDSLVWELMLQAGRIVNVHLPKDRVTQLHQGYGFVEFISEEDAEYASK 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI L+ + +R + DK
Sbjct: 73 IMNGI-RLHGKPIRVNKASADKQ 94
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL---------YIPRDKETDKPKGFAFVEYE 58
G +++GNLD V+E+VL+D + G +V+ I RD + + KG+ FV +
Sbjct: 100 GAELFVGNLDPMVAEQVLFDTFSRFGNLVNPPKLISLLSSQIARD-DNNLSKGYGFVSFA 158
Query: 59 SEEIADYAIKLFSG 72
E +D AI +G
Sbjct: 159 DFESSDAAITNMNG 172
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLD + +E +++++ QAG VV++Y+P+D+ T+ +G+ FVE++ EE ADY
Sbjct: 28 NQEATVYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTNAHQGYGFVEFKGEEDADY 87
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
AIK+ + +V +Y + +R + QDK
Sbjct: 88 AIKVLN-MVKVYGKAIRVNKASQDK 111
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
++ G N++IGNLD V E++LYD G +V+ I RD +T +GF FV Y+ E
Sbjct: 113 QADVGANLFIGNLDPDVDEKLLYDTFSAFGVIVNTPKIMRDPDTGNSRGFGFVSYDCFEA 172
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D AI+ +G L NR +
Sbjct: 173 SDAAIEAMNGQY-LCNRAI 190
>gi|213402019|ref|XP_002171782.1| spliceosome-associated protein [Schizosaccharomyces japonicus
yFS275]
gi|211999829|gb|EEB05489.1| spliceosome-associated protein [Schizosaccharomyces japonicus
yFS275]
Length = 303
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD+KV++ +L+++ +QAG VV ++IPRD+ GF F EY +E A+Y
Sbjct: 7 NQEATIYIGNLDDKVTDSILFELCLQAGPVVHIHIPRDRIRATHNGFGFCEYATEADAEY 66
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQ 93
A ++ + V L+ + +R S QDKNTQ
Sbjct: 67 ACQVLNQ-VKLFGKAIRVNKSSQDKNTQ 93
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G NV++GNLD V E+VL+D G++V + RD ++ K KG+ FV ++S E D A
Sbjct: 97 GANVFVGNLDTLVDEKVLFDTFSAFGQMVQPPQVVRD-DSGKSKGYGFVFFDSFEAGDAA 155
Query: 67 IK 68
I+
Sbjct: 156 IE 157
>gi|70984076|ref|XP_747559.1| splicing factor 3b subunit 4 [Aspergillus fumigatus Af293]
gi|66845186|gb|EAL85521.1| splicing factor 3b subunit 4 [Aspergillus fumigatus Af293]
gi|159122344|gb|EDP47465.1| splicing factor 3b subunit 4 [Aspergillus fumigatus A1163]
Length = 352
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G +V++ + RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLD +E +L+++ +QAG VV++Y+P+D+ ++ +G+ FVE+ +EE ADY
Sbjct: 5 NQDATIYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADY 64
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
AIK+ + ++ L+ + +R + QDK + +
Sbjct: 65 AIKVLN-MIKLHGKPVRVNKASQDKKSND 92
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD ++ E++LYD G V+ I RD ++ +GF FV Y+S E AD A
Sbjct: 94 GANLFVGNLDSELDEKLLYDTFSAFGVVITTPKIMRDPDSGNSRGFGFVSYDSFEAADAA 153
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
I+ +G L NR ++ FA + ++ + L++ RS
Sbjct: 154 IEAMNGQF-LCNRPISVTFAYKKDTRGERHGTPAERMLAANMERS 197
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|308510552|ref|XP_003117459.1| CRE-SAP-49 protein [Caenorhabditis remanei]
gi|308242373|gb|EFO86325.1| CRE-SAP-49 protein [Caenorhabditis remanei]
Length = 389
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE +L+++++QAG VV + +P+D+ T +GF FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKN 91
AIK+ + ++ LY + ++ S +KN
Sbjct: 70 AIKILN-MIKLYGKPIKVNKASAHEKN 95
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++LYD G ++ + I RD ++ KGFAF+ + S E
Sbjct: 95 NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR-----KSR-----SD 110
+D A++ +G L NR T+ +A K ++ + L+++ K R SD
Sbjct: 155 SDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSD 213
Query: 111 -PVPVPVN---GMEISHHSMRISGTRHYSSEEPPPPGVTHESNGY 151
P+ VP N + H ++ T + PPP + +NGY
Sbjct: 214 VPLGVPANTPLAIPGVHAAIAAHATGRPGYQ--PPPLMGMPTNGY 256
>gi|119467844|ref|XP_001257728.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
gi|119405880|gb|EAW15831.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
Length = 352
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G +V++ + RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|121703528|ref|XP_001270028.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
gi|119398172|gb|EAW08602.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
Length = 354
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G +V++ + RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|115532084|ref|NP_001021932.1| Protein SAP-49 [Caenorhabditis elegans]
gi|55977846|sp|Q09442.2|SF3B4_CAEEL RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Spliceosome-associated protein 49
gi|50511896|emb|CAB60993.2| Protein SAP-49 [Caenorhabditis elegans]
Length = 388
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE +L+++++QAG VV + +P+D+ T +GF FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKN 91
AIK+ + ++ LY + ++ S +KN
Sbjct: 70 AIKILN-MIKLYGKPIKVNKASAHEKN 95
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++LYD G ++ + I RD ++ KGFAF+ + S E
Sbjct: 95 NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR-----KSR-----SD 110
+D A++ +G L NR T+ +A K ++ + L+++ K R SD
Sbjct: 155 SDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSD 213
Query: 111 -PVPVPVN---GMEISHHSMRISGTRHYSSEEPPPPGVTHESNGYE 152
P+ VP N M H ++ T + PPP + +GY+
Sbjct: 214 VPLGVPANTPLAMPGVHAAIAAHATGRPGYQ--PPPLMGMAQSGYQ 257
>gi|341882220|gb|EGT38155.1| hypothetical protein CAEBREN_32522 [Caenorhabditis brenneri]
gi|341882722|gb|EGT38657.1| hypothetical protein CAEBREN_06124 [Caenorhabditis brenneri]
Length = 388
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE +L+++++QAG VV + +P+D+ T +GF FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + ++
Sbjct: 70 AIKILN-MIKLYGKPIK 85
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++LYD G ++ + I RD ++ KGFAF+ + S E
Sbjct: 95 NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR----------KSRSD 110
+D A++ +G L NR T+ +A K ++ + L+++ + SD
Sbjct: 155 SDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQQFSD 213
Query: 111 -PVPVPVN---GMEISHHSMRISGTRHYSSEEPPP 141
P+ VP N + H ++ T + +PPP
Sbjct: 214 VPLGVPANTPLAIPGVHAAIAAHATGRPGAYQPPP 248
>gi|268529722|ref|XP_002629987.1| C. briggsae CBR-SAP-49 protein [Caenorhabditis briggsae]
Length = 370
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE +L+++++QAG VV + +P+D+ T +GF FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKN 91
AIK+ + ++ LY + ++ S +KN
Sbjct: 70 AIKILN-MIKLYGKPIKVNKASAHEKN 95
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++LYD G ++ + I RD ++ KGFAF+ + S E
Sbjct: 95 NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR-----KSR-----SD 110
+D ++ G L NR T+ +A K ++ + L+S+ K R SD
Sbjct: 155 SDRGLEAMRGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLASQNPLFPKDRPHQVFSD 213
Query: 111 -PVPVPVN---GMEISHHSMRISGTRHYSSEEPPPPGVTHESNGY 151
P+ VP N + H ++ T + PPP + +NGY
Sbjct: 214 VPLGVPANTPLAIPGVHAAIAAHATGRPGYQ--PPPLMGMPANGY 256
>gi|260940088|ref|XP_002614344.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
gi|238852238|gb|EEQ41702.1| hypothetical protein CLUG_05830 [Clavispora lusitaniae ATCC 42720]
Length = 222
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +VY+GNLD +VSE +LY++ IQAG V L++P+D+ + + +GF FVE+ + + ADY
Sbjct: 13 NPHASVYVGNLDPQVSETLLYELFIQAGPVRSLHLPKDRISREHQGFGFVEFRTAQDADY 72
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLS 103
A++LF G V L+ RTL+ K T S T T S
Sbjct: 73 AVELFRG-VRLFGRTLKM------KKTDPQSTTETETS 103
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNL+ V E+ L + + G +V + E PKG FVE+ E +D A+
Sbjct: 108 GARLFVGNLNPLVDEQYLRETFNKFGALVGRPVLARDENGTPKGHGFVEFSDFESSDDAL 167
Query: 68 KLFSGIVTLYNRT-LRFALSGQDKNTQNSSMTTTPLSSR 105
+G + + +R + +A DK+ ++ L+ +
Sbjct: 168 SKMNGAILMNSRIKVEYAYKDGDKHIRHGDEVERLLAQQ 206
>gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio]
Length = 400
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDAAVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNL ++SE +L ++ +QAG VV ++IP+DK T+ + F FV++ +EE ADY
Sbjct: 22 NQDATIYVGNLSPQLSEDLLLELFVQAGPVVSVFIPKDKVTNLQQTFGFVQFRNEEDADY 81
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
AIK+++ ++ LY +R + QDK +
Sbjct: 82 AIKVYN-MIKLYGEPIRVKKASQDKKS 107
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G V D I RD +T P+GF F+ Y+S E +D A
Sbjct: 111 GANLFIGNLDPDVDEKMLYDTFSAFGMVADHPKIMRDPDTGNPRGFGFISYDSFEASDAA 170
Query: 67 IKLFSG 72
I+ SG
Sbjct: 171 IEAMSG 176
>gi|115398490|ref|XP_001214834.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
gi|114191717|gb|EAU33417.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
Length = 349
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+GNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADK 93
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-------YIPRDKETDKPKGFAFVEYESE 60
G +++GNLD V+E+VLYD + G ++++ ++ RD + + KG+ FV +
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGNLINIPKASLFSWVARD-DNNLSKGYGFVSFGDF 158
Query: 61 EIADYAIKLFSG 72
E +D AI +G
Sbjct: 159 ESSDAAIANMNG 170
>gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE +L+++++QAG VV + +P+D+ T +GF FVE+ EE ADY
Sbjct: 20 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 79
Query: 66 AIKLFSGIVTLYNRTLRF-ALSGQDKN 91
AIK+ + ++ LY + ++ S +KN
Sbjct: 80 AIKILN-MIKLYGKPIKVNKASAHEKN 105
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++LYD G ++ + I RD ++ KGFAF+ + S E
Sbjct: 105 NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEA 164
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR-----KSR-----SD 110
+D A++ +G L NR T+ +A K ++ + L+++ K R SD
Sbjct: 165 SDTALEAMNGQF-LCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSD 223
Query: 111 -PVPVPVN---GMEISHHSMRISGTRHYSSEEPPPPGVTHESNGYE 152
P+ VP N M H ++ T + PPP + +GY+
Sbjct: 224 VPLGVPANTPLAMPGVHAAIAAHATGRPGYQ--PPPLMGMAQSGYQ 267
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G+LD+KV+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD +T KG+AF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSS 96
AD A++ +G L NR ++ FA K ++ S
Sbjct: 155 ADAALEAMNGQF-LCNRAISISFAFKKDSKGERHGS 189
>gi|326472489|gb|EGD96498.1| splicing factor 3b subunit 4 [Trichophyton tonsurans CBS 112818]
Length = 362
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
>gi|302510905|ref|XP_003017404.1| hypothetical protein ARB_04284 [Arthroderma benhamiae CBS 112371]
gi|291180975|gb|EFE36759.1| hypothetical protein ARB_04284 [Arthroderma benhamiae CBS 112371]
Length = 379
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ L + RD +++ KG+ F+ + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLDEKVSE +L+++ +QAG VV++++P+D+ T +G+ F+E+ E+ ADY
Sbjct: 10 NQDATIYVGNLDEKVSETLLWELFLQAGPVVNVHMPKDRITQAHQGYGFIEFLGEDDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV+IGNLD +V E+ LYD G ++ I RD ET + KGFAF+ + S +
Sbjct: 95 NLDVGANVFIGNLDPEVDEKQLYDTFSAFGVILQTPKIMRDPETGQSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D A++ +G L NRT+
Sbjct: 155 SDAAMEAMNGQF-LCNRTI 172
>gi|348684961|gb|EGZ24776.1| hypothetical protein PHYSODRAFT_484926 [Phytophthora sojae]
Length = 209
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLD++V+E +L+++++QAG V ++++PRDK T + + FVE+ +EE A+Y
Sbjct: 9 NQDATVYVGNLDDRVTEELLWELMLQAGSVCNVHMPRDKVTGSHQNYGFVEFRTEECAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKN 91
A+K+ + +V L+ + +R + D+
Sbjct: 69 AVKVLN-MVQLFGKAIRVKKASSDRK 93
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++LYD G +++ I RD +T +GF FV ++S E
Sbjct: 94 NLDVGANLFLGNLDPEVDEKLLYDTFSAFGGIIETPKIMRDPDTKASRGFGFVSFDSFEA 153
Query: 63 ADYAIKLFSG 72
AD AI+ G
Sbjct: 154 ADLAIECMHG 163
>gi|241708466|ref|XP_002403282.1| spliceosome associated protein, putative [Ixodes scapularis]
gi|215505045|gb|EEC14539.1| spliceosome associated protein, putative [Ixodes scapularis]
Length = 408
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVS+ +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSDTILWELFVQAGPVVNVHMPKDRVTGHHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD +T KG+AF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 155 SDAAIEAMNG-QYLCNRAITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|147898449|ref|NP_001089615.1| uncharacterized protein LOC734673 [Xenopus laevis]
gi|68534615|gb|AAH99272.1| MGC116464 protein [Xenopus laevis]
Length = 391
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+S N ++YIGNLD +V+E +L++ ++QAG V+ + +PRDK + +G+ FVE+++E
Sbjct: 3 LSEQRNQEASIYIGNLDSQVNEEILWECMLQAGPVLSVNMPRDKVSGFHQGYGFVEFKTE 62
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDK 90
E ADYA+K+ + ++ LYN+ +R + DK
Sbjct: 63 EDADYALKVMN-MIKLYNKPIRCNKATTDK 91
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNL +V E++L+D Q G ++ I +D E+ KGFAFV ++S + AD+A
Sbjct: 97 GANLFVGNLAPEVDEKMLFDTFSQFGNLISTPKIMKDPESGGSKGFAFVSFDSFDGADHA 156
Query: 67 IKLFSGIVTLYNRTL 81
I+ +G YN+ +
Sbjct: 157 IQSMNGQF-FYNKQI 170
>gi|327297502|ref|XP_003233445.1| splicing factor 3b subunit 4 [Trichophyton rubrum CBS 118892]
gi|326464751|gb|EGD90204.1| splicing factor 3b subunit 4 [Trichophyton rubrum CBS 118892]
Length = 379
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ L + RD +++ KG+ F+ + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|296810102|ref|XP_002845389.1| splicing factor 3B subunit 4 [Arthroderma otae CBS 113480]
gi|238842777|gb|EEQ32439.1| splicing factor 3B subunit 4 [Arthroderma otae CBS 113480]
Length = 371
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ L + RD +++ KG+ F+ + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|302668184|ref|XP_003025667.1| hypothetical protein TRV_00155 [Trichophyton verrucosum HKI 0517]
gi|291189788|gb|EFE45056.1| hypothetical protein TRV_00155 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ L + RD +++ KG+ F+ + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|407922777|gb|EKG15869.1| hypothetical protein MPH_06834 [Macrophomina phaseolina MS6]
Length = 379
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
VY+GNLDE+V++R+++++++Q GR+ ++++P+D+ T +G+ FVE++SEE ADYA K+
Sbjct: 15 TVYVGNLDERVTDRLVWELMLQVGRIQNVHLPKDRVTQTHQGYGFVEFQSEEEADYAAKI 74
Query: 70 FSGIVTLYNRTLRFALSGQDKN 91
+ I LY + +R + DK
Sbjct: 75 MNQI-RLYGKPIRVNKASADKQ 95
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V E+VL+D + G +V + RD E + KG+ FV + + E +D A
Sbjct: 101 GAELFVGNLDPMVDEKVLFDCFSRFGSLVSAPKVARD-ENNLSKGYGFVSFATFESSDDA 159
Query: 67 IKLFSG 72
I +G
Sbjct: 160 IANMNG 165
>gi|299117359|emb|CBN75315.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 529
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y GNLD V+E +L++++IQAG V ++++P+DK T +GF FVE+ SE+ A+Y
Sbjct: 9 NQDATCYTGNLDSSVTEALLWELMIQAGPVANVHMPKDKITGVHQGFGFVEFRSEDDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
AIK+ + +V L+ + LR + QD+ +
Sbjct: 69 AIKIMN-MVKLFGKPLRVNKASQDRKAND 96
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IG LD V E++LYD G + + RD +T KG+ FV Y+ E +D A
Sbjct: 98 GANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKA 157
Query: 67 IKLF 70
I+
Sbjct: 158 IECM 161
>gi|422292932|gb|EKU20233.1| splicing factor 3B subunit 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 301
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY G LDEKV+E +L++++ G VV +++PRDK T + F FVE+ SEE ADY
Sbjct: 10 NQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A+K+ + +V +Y + LR + QD+ T
Sbjct: 70 AVKIMN-MVRMYGKPLRVNKASQDRKT 95
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNL +V E+ LYD G + + D +T KGF FV ++S E ADYA
Sbjct: 99 GANLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHH 124
I+ +G L R +++A K ++ S L++ ++ + H
Sbjct: 159 IECMNG-AYLGGRPICVQYAYKKDSKGERHGSQAERLLAASNQQA---------VRFKAH 208
Query: 125 SMRISGTRHYSS--EEPPPP 142
++ +G + PPPP
Sbjct: 209 TLFATGPGQIGTGMGAPPPP 228
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSG 72
+D A+ +G
Sbjct: 155 SDAAMDAMNG 164
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKV+E +L+++ +QAG VV+ ++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKVLN-MIKLYGKPVR 85
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD E+ KG+AF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDVESGNSKGYAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
AD AI+ +G L NR T+ FA + ++ S L+++ S P
Sbjct: 155 ADAAIEAMNG-QYLCNRAITISFAFKKDSRGERHGSAAERLLAAQNPLSQ-ADRPHQLFA 212
Query: 121 ISHHSMRISGTRHYSSEEPPPP--GVTHESN 149
+ + + +G + PPPP G T SN
Sbjct: 213 DAPPTAQANGVVSSLGQAPPPPPSGGTATSN 243
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|315044761|ref|XP_003171756.1| splicing factor 3B subunit 4 [Arthroderma gypseum CBS 118893]
gi|311344099|gb|EFR03302.1| splicing factor 3B subunit 4 [Arthroderma gypseum CBS 118893]
Length = 382
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++++++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDKLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ L + RD +++ KG+ F+ + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|83771650|dbj|BAE61780.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871241|gb|EIT80403.1| splicing factor 3b, subunit 4 [Aspergillus oryzae 3.042]
Length = 139
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY + +R + DK
Sbjct: 73 IMNGI-RLYGKPIRVNKASADKQ 94
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ + RD ET K KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKLMRDPETGKSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|183230140|ref|XP_655332.2| splicing factor 3B subunit 4 [Entamoeba histolytica HM-1:IMSS]
gi|169803064|gb|EAL49944.2| splicing factor 3B subunit 4, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710589|gb|EMD49637.1| splicing factor 3B subunit 4, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 61/82 (74%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY +LDEKV E++LY+++IQAG VV++ IPRD+ +++ KG A+VE++ + ADYA+K+F
Sbjct: 17 VYCSDLDEKVDEQLLYELMIQAGPVVNISIPRDRISNQHKGVAYVEFQHDYDADYAVKVF 76
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
+ LY + ++F+ + Q K +
Sbjct: 77 GDNIKLYGKQVKFSRNIQLKKS 98
>gi|291224886|ref|XP_002732430.1| PREDICTED: splicing factor 3b, subunit 4-like [Saccoglossus
kowalevskii]
Length = 388
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +Q+G VV+ ++P+D+ T + +G+ FVE+ EE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEALLWELFLQSGPVVNTHMPKDRVTQQHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ +Y + +R
Sbjct: 70 AIKIMN-MIKIYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD E+ KG+AF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPESGNSKGYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 155 SDAAIEAMNGQY-LCNRPITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D A+ +G L NR ++ +A K ++ S L+++
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQ 198
>gi|255931581|ref|XP_002557347.1| Pc12g04780 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581966|emb|CAP80105.1| Pc12g04780 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+VS+ +++++++Q GR+V++++P+D+ T +G+ FVE+ SEE A+YA K
Sbjct: 13 ATVYIGNLDERVSDSLVWELMLQVGRIVNVHLPKDRVTQLHQGYGFVEFISEEDAEYASK 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI L+ + +R + DK
Sbjct: 73 IMNGI-RLHGKPIRVNKASADKQ 94
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VL+D + G +V+ I RD + + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPMVAEQVLFDTFSRFGNLVNPPKIARD-DNNLSKGYGFVSFADFESSDAA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY G LDEKV+E +L++++ G VV +++PRDK T + F FVE+ SEE ADY
Sbjct: 10 NQDATVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A+K+ + +V +Y + LR + QD+ T
Sbjct: 70 AVKIMN-MVRMYGKPLRVNKASQDRKT 95
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNL +V E+ LYD G + + D +T KGF FV ++S E ADYA
Sbjct: 99 GANLFIGNLAAEVDEKDLYDTFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHH 124
I+ +G L R +++A K ++ S L++ ++ + H
Sbjct: 159 IECMNG-AYLGGRPICVQYAYKKDSKGERHGSQAERLLAASNQQA---------VRFKAH 208
Query: 125 SMRISGTRHYSS--EEPPPP 142
++ +G + PPPP
Sbjct: 209 TLFATGPGQIGTGMGAPPPP 228
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD +V + +L+++ +Q G V + +PRDK T +G+ FVE+ +E ADY
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFTNEVDADY 85
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+KL + +V LY ++LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKSLRLNKSAQDR 109
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N + G N+++GNLD V E+ +YD G ++ I RD ET +GF FV +++ E +
Sbjct: 111 NFDVGANIFLGNLDPDVDEKTIYDTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEAS 170
Query: 64 DYAIKLFSG 72
D A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|407037930|gb|EKE38853.1| splicing factor 3B subunit 4, putative [Entamoeba nuttalli P19]
Length = 199
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 61/82 (74%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY +LDEKV E++LY+++IQAG V+++ IPRD+ +++ KG A+VE++ + ADYA+K+F
Sbjct: 17 VYCSDLDEKVDEQLLYELMIQAGPVINISIPRDRISNQHKGVAYVEFQHDYDADYAVKVF 76
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
+ LY + ++F+ + Q K +
Sbjct: 77 GDNIKLYGKQVKFSRNIQLKKS 98
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVS+ +++++ +QAG VV++++P+D+ T +G+ FVE+ +E+ ADY
Sbjct: 10 NQDATIYVGGLDEKVSDTLMWELFVQAGPVVNVHMPKDRVTQSHQGYGFVEFLAEDDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV+IGNLD +V E++LYD G ++ I RD +T KGFAF+ Y S E
Sbjct: 95 NLDVGANVFIGNLDSEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYASFEA 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D AI+ +G L NR +
Sbjct: 155 SDAAIEAMNG-QHLCNRAV 172
>gi|443900412|dbj|GAC77738.1| splicing factor 3b, subunit 4 [Pseudozyma antarctica T-34]
Length = 319
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N YIGNLDE+ ++ ++++++IQAG +V+L++P+D+ + +G+AF E+++E+ ADY
Sbjct: 60 NQDATCYIGNLDERATDAIVWELMIQAGPLVNLHLPKDRISQTHQGYAFAEFQTEQDADY 119
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ +G+ LY + +R + D+
Sbjct: 120 ACKVMNGL-KLYGKPIRVNKASNDR 143
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++G+LD V E +LY+ G +V L + RD T +PKG+AFV ++S E AD A
Sbjct: 149 GANLFVGSLDPAVDEHLLYETFSAFGNIVGLPKVARDPATGEPKGYAFVSFDSFEAADAA 208
Query: 67 IKLFSGIVTL-YNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHS 125
++ +G L N T+ +A+ KN + L + ++R + +P + H+
Sbjct: 209 VEALNGQFLLNKNITVDYAIKKDSKNGERHGTAAERLLAAQARKNNA-LPTQQYPPAPHA 267
Query: 126 MRISGTRHYSSEEPPPP 142
+ + S PPP
Sbjct: 268 LPQPYAQPPQSNGAPPP 284
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D A+ +G L NR ++ +A K ++ S L+++ S
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta
CCMP2712]
Length = 209
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GN+ EK +E +L+++ +QAG VV+++IPRDK T GF FVE+ SEE A+Y
Sbjct: 12 NQDATIYVGNITEKCTEEILWELFLQAGPVVNVHIPRDKVTTVHSGFGFVEFRSEEDAEY 71
Query: 66 AIKLFSGIVTLYNRTLRF 83
AIK+ + ++ L+ + LR
Sbjct: 72 AIKIMN-MIKLHGQPLRL 88
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD--LYIPRDKETDKPKGFAFVEYESEEIADY 65
G N++IGNL+ +V E++LYD G +V RD ET + KGFAFV Y+ E AD
Sbjct: 102 GANLFIGNLEPEVDEKLLYDTFSAFGVIVGNTPKCMRDPETGQSKGFAFVNYDCFEAADM 161
Query: 66 AIKLFSG 72
AI+ +G
Sbjct: 162 AIEAMNG 168
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D A+ +G L NR ++ +A K ++ S L+++ S
Sbjct: 155 SDAAMDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|198425590|ref|XP_002119350.1| PREDICTED: similar to splicing factor 3b, subunit 4 [Ciona
intestinalis]
Length = 375
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKV+E +L+++ +QAG VV ++P+D+ + +G+ FVE+ +EE ADY
Sbjct: 10 NQDATVYVGGLDEKVAEPLLWELFLQAGVVVSTHMPKDRISGSHQGYGFVEFLAEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKILN-MIKLYGKPIR 85
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S E
Sbjct: 95 NLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D A++ +G L NR +
Sbjct: 155 SDAAMEAMNG-QHLCNRPI 172
>gi|242824075|ref|XP_002488188.1| splicing factor 3b subunit 4 [Talaromyces stipitatus ATCC 10500]
gi|218713109|gb|EED12534.1| splicing factor 3b subunit 4 [Talaromyces stipitatus ATCC 10500]
Length = 352
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ + I RD + + KG+ FV + + +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGTLLSMPKIARD-DANLSKGYGFVSFADFDASDAA 158
Query: 67 IKLFSG 72
I G
Sbjct: 159 IANMHG 164
>gi|295669139|ref|XP_002795118.1| spliceosome associated protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285811|gb|EEH41377.1| spliceosome associated protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 389
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK+
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKH 94
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V+E++LYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFIGNLDPMVTEQILYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|449281849|gb|EMC88820.1| Splicing factor 3B subunit 4, partial [Columba livia]
Length = 177
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADYAIK
Sbjct: 2 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK 61
Query: 69 LFSGIVTLYNRTLR 82
+ + ++ LY + +R
Sbjct: 62 IMN-MIKLYGKPIR 74
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 84 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 143
Query: 63 ADYAIKLFSG 72
+D AI+ +G
Sbjct: 144 SDAAIEAMNG 153
>gi|226290828|gb|EEH46282.1| spliceosome associated protein [Paracoccidioides brasiliensis
Pb18]
Length = 390
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V+E++LYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFIGNLDPMVTEQILYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|17530817|ref|NP_511058.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|7290689|gb|AAF46136.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|68051249|gb|AAY84889.1| RE50839p [Drosophila melanogaster]
gi|220952204|gb|ACL88645.1| Spx-PA [synthetic construct]
Length = 347
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
IK+ + ++ LY + +R
Sbjct: 70 GIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSG 72
+D A+ +G
Sbjct: 155 SDAAMDAMNG 164
>gi|212546197|ref|XP_002153252.1| splicing factor 3b subunit 4 [Talaromyces marneffei ATCC 18224]
gi|210064772|gb|EEA18867.1| splicing factor 3b subunit 4 [Talaromyces marneffei ATCC 18224]
Length = 351
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD VSE+VLYD + G ++ L I RD + + KG+ FV + + +D A
Sbjct: 100 GAELFVGNLDPMVSEQVLYDTFSRFGTLLSLPKIARD-DANLSKGYGFVSFADFDASDAA 158
Query: 67 I 67
I
Sbjct: 159 I 159
>gi|167539870|ref|XP_001741392.1| splicing factor 3B subunit [Entamoeba dispar SAW760]
gi|165894094|gb|EDR22178.1| splicing factor 3B subunit, putative [Entamoeba dispar SAW760]
Length = 199
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 60/82 (73%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY +LDEKV E++LY+++IQAG VV++ IPRD+ +++ KG +VE++ + ADYA+K+F
Sbjct: 17 VYCSDLDEKVDEQLLYELMIQAGPVVNVSIPRDRISNQHKGIGYVEFQHDYDADYAVKVF 76
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
+ LY + ++F+ + Q K +
Sbjct: 77 GDNIKLYGKQVKFSRNVQLKKS 98
>gi|225554276|gb|EEH02576.1| splicing factor 3b subunit 4 [Ajellomyces capsulatus G186AR]
Length = 387
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE++++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|325094983|gb|EGC48293.1| splicing factor 3B [Ajellomyces capsulatus H88]
Length = 387
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE++++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|388858107|emb|CCF48344.1| related to spliceosome-associated protein SAP-49 [Ustilago
hordei]
Length = 297
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N YIGN+D++ ++ ++++++IQAG +V+L++P+D+ T +G+AF E+++E+ ADY
Sbjct: 10 NQDATCYIGNIDDRATDAIVWELMIQAGPLVNLHLPKDRITQSHQGYAFAEFQTEQDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ +G+ LY + +R + D+
Sbjct: 70 ACKVMNGL-KLYGKPIRVNKASNDR 93
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++G+LD V ER+LY+ G ++ L + RD +PKGF FV ++S E AD A
Sbjct: 99 GANLFVGSLDPAVDERLLYETFSAFGGIIGLPKVARDPAGGEPKGFGFVSFDSFEAADAA 158
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
I+ +G L N T+ +A+ KN + L + ++R +
Sbjct: 159 IEALNGQFLLNNNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 203
>gi|345567290|gb|EGX50224.1| hypothetical protein AOL_s00076g299 [Arthrobotrys oligospora ATCC
24927]
Length = 385
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+ ++++P+D+ T +GF FVE+ SEE A+YA +
Sbjct: 12 ATVYIGNLDERVTDALVWELMLQAGRISNVHLPKDRVTQTHQGFGFVEFVSEEDAEYAAR 71
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + I LY + +R + DK
Sbjct: 72 IMNQI-RLYGKPIRVNKASADKQ 93
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V E+ LYD + G + I RD E +GF FV++++ E +D A
Sbjct: 99 GAELFIGNLDSMVDEKTLYDTFMTFGTITAPPKIARD-EAGISRGFGFVQFDNFESSDKA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD------PVPVPVNG 118
I G L N+ ++ +A K ++ L+S+ +++ P+P + G
Sbjct: 158 IDAMQGQY-LMNKEISVSYAFKKDGKGERHGDQAERLLASQARKNNVQVQVQPLPSALLG 216
Query: 119 MEIS 122
+++
Sbjct: 217 QQVA 220
>gi|154276886|ref|XP_001539288.1| hypothetical protein HCAG_06893 [Ajellomyces capsulatus NAm1]
gi|150414361|gb|EDN09726.1| hypothetical protein HCAG_06893 [Ajellomyces capsulatus NAm1]
Length = 387
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE++++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|195340414|ref|XP_002036808.1| GM12470 [Drosophila sechellia]
gi|194130924|gb|EDW52967.1| GM12470 [Drosophila sechellia]
Length = 299
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y G LD+KVSE +L+++ +QAG VV++++P+D+ T +G+ FVE+ SEE ADY
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
IK+ + ++ LY + +R
Sbjct: 70 GIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 154
Query: 63 ADYAIKLFSG 72
+D A+ +G
Sbjct: 155 SDAAMDAMNG 164
>gi|339244657|ref|XP_003378254.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972855|gb|EFV56501.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 432
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDE+VSE +L+++ +QAG +V +++P+D+ + +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDERVSETILWELFVQAGPIVSVHMPKDRISSTHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV+IGNLD +V E++LYD G ++ + I RD ET KGFAF+ + S E
Sbjct: 95 NLDIGANVFIGNLDPEVDEKLLYDTFSAFGVLLQVPKIMRDPETGNSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSG 72
+D AI+ +G
Sbjct: 155 SDAAIEAMNG 164
>gi|378730244|gb|EHY56703.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 345
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLDE+V++ +++++ +QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA ++
Sbjct: 15 IYIGNLDERVTDALVWELFLQAGRIVNVHLPKDRVTQTHQGYGFVEFTSEEDAEYAARIM 74
Query: 71 SGIVTLYNRTLRFALSGQDKN 91
+ V LY + +R + DK
Sbjct: 75 N-QVRLYGKPIRVNKASADKQ 94
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V ER+LY+ + G +V I RD E + KG+ FV + E +D A
Sbjct: 100 GAELFVGNLDPMVDERMLYETFGRFGTLVAAPKIARD-ENNLSKGYGFVSFADFESSDDA 158
Query: 67 IKLFSGIVTLYNR--TLRFAL----SGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNG 118
I +G L N+ T+++A G+ Q M + + P +P+ G
Sbjct: 159 IANMNGQY-LMNKEVTVQYAYKKDGKGERHGDQAERMLAAQAKAHGVQPTPATIPLGG 215
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|301097256|ref|XP_002897723.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
gi|262106744|gb|EEY64796.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
Length = 188
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLD++V+E +L+++++Q+G V ++++PRDK T + + FVE+ +E+ A+Y
Sbjct: 9 NQDATVYVGNLDDRVTEELLWELMLQSGSVCNVHMPRDKVTGAHQNYGFVEFRTEDCAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + ++ LY R +R + D+
Sbjct: 69 AVKVLN-MIQLYGRVIRVKKASNDR 92
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G +V+ I RD +T KGF FV ++S E
Sbjct: 94 NLDVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEA 153
Query: 63 ADYAIKLFSG--IVTLYNRTLR 82
AD AI+ G + + N T R
Sbjct: 154 ADLAIECMHGQYLTVIMNVTAR 175
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|443717173|gb|ELU08367.1| hypothetical protein CAPTEDRAFT_163289 [Capitella teleta]
Length = 412
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KVSE +L+++ +QAG VV++++P+D+ + +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVSESILWELFLQAGPVVNVHMPKDRISQAHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AI++ + ++ LY + +R
Sbjct: 70 AIRIMN-MIKLYGKPIR 85
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD +T KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINFASFET 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D AI+ +G L NR +
Sbjct: 155 SDSAIEAMNG-QYLCNRAI 172
>gi|239608889|gb|EEQ85876.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis ER-3]
Length = 383
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|261187642|ref|XP_002620240.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis
SLH14081]
gi|239594131|gb|EEQ76712.1| spliceosome-associated protein 49 [Ajellomyces dermatitidis
SLH14081]
gi|327357210|gb|EGE86067.1| splicing factor 3b subunit 4 [Ajellomyces dermatitidis ATCC
18188]
Length = 383
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|452820612|gb|EME27652.1| splicing factor 3B subunit 4 [Galdieria sulphuraria]
Length = 265
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLDE+VSE +L+++++Q G V +YIPRD+ T + +G+ FVE+++E A Y
Sbjct: 20 NQEATLYVGNLDERVSEELLWELMVQVGPVKHVYIPRDRITGQTQGYGFVEFKNEMDAIY 79
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
A K+ + +V +Y + LR + DK + +
Sbjct: 80 ATKVLN-MVRVYAKPLRLQQASTDKRSMD 107
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNL ++V E++LYD G +++ +I RD ET + KG+ F++++S E +D A
Sbjct: 109 GANLFVGNLSQEVDEKLLYDTFSAFGAIIETPHIMRDPETGESKGYGFIKFDSFEASDAA 168
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSR 105
I+ +G N+ T+++A +D ++ S L++R
Sbjct: 169 IETMNGQFLGNNQVTVQYAFK-KDTKERHGSQAERILAAR 207
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +++GNLD++V E +L+++ +Q G VVD IPRD+ T+ G+AFVE++ E A+Y
Sbjct: 3 NQEATIFVGNLDQQVDEELLWELFVQMGPVVDAKIPRDRITNTHSGYAFVEFKHEHDANY 62
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
AI++ + I L+ R ++ QDK+ +N
Sbjct: 63 AIQVMNQI-KLFGRPMKLNRYDQDKSAKN 90
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 2 SGNSNSGCNVYIGNLDE-KVS-ERVLYDILIQAGRVVD--LYIPRDKETDKPKGFAFVEY 57
+ N + G N+++GNLD VS E +L ++ Q G ++ I RD ET + KGFAFV Y
Sbjct: 88 AKNLDVGANLWVGNLDPVGVSDEGILRELFGQFGVMIQNTPRIQRDPETMESKGFAFVSY 147
Query: 58 ESEEIADYA 66
++ E AD A
Sbjct: 148 DNFESADAA 156
>gi|383857497|ref|XP_003704241.1| PREDICTED: splicing factor 3B subunit 4-like [Megachile
rotundata]
Length = 413
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|48097884|ref|XP_393914.1| PREDICTED: splicing factor 3B subunit 4 [Apis mellifera]
Length = 413
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|380011609|ref|XP_003689892.1| PREDICTED: splicing factor 3B subunit 4-like [Apis florea]
Length = 413
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ VY+GNLD +V+E VL+++ +QAG V ++Y+P+D+ T +G+ FVE+ +EE A+Y
Sbjct: 26 NAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDAEY 85
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
IK+ + +V L+ + ++ S D+
Sbjct: 86 GIKILN-MVKLFGKPIKVNKSVGDR 109
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD + E++LYD G V++ I RD + KGF FV Y+S E +D A
Sbjct: 114 GANLFIGNLDPDIDEKLLYDTFSAFGVVINTPKIMRDPDNGASKGFGFVAYDSFEASDAA 173
Query: 67 IKLFSG 72
I+ +G
Sbjct: 174 IEAMNG 179
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV++ +L+++ +QAG VV + +P+D+ T +GF F+E+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV++GNLD +V E++L+D G ++ + I RD ET KGFAFV + S E
Sbjct: 95 NMDVGANVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D AI+ +G L NR +
Sbjct: 155 SDSAIEAMNGQF-LCNRAI 172
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV++ +L+++ +QAG VV + +P+D+ T +GF F+E+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV++GNLD +V E++L+D G ++ + I RD ET KGFAFV + S E
Sbjct: 95 NMDVGANVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGXSKGFAFVNFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D AI+ +G L NR +
Sbjct: 155 SDSAIEAMNGQF-LCNRAI 172
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +L+++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S E +D A
Sbjct: 99 GANIFIGNLDLEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+ +G L NR ++ +A K ++ S L+++ S
Sbjct: 159 MDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|225683056|gb|EEH21340.1| spliceosome-associated protein [Paracoccidioides brasiliensis
Pb03]
Length = 200
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMNQ-VRLYGKPIRVNKASADKQ 94
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V+E++LYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFIGNLDPMVTEQILYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|452982549|gb|EME82308.1| hypothetical protein MYCFIDRAFT_211591 [Pseudocercospora
fijiensis CIRAD86]
Length = 391
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLDE+ S+ +++++++QAG V+++++P+D+ T +G+ FVE+ SE+ ADYA+K+
Sbjct: 15 LYIGNLDERCSDALVWELMLQAGPVINVHLPKDRVTQSHQGYGFVEFGSEDDADYAVKIM 74
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+ I L+ + +R + DK
Sbjct: 75 NQI-RLWGKPIRVNKASADK 93
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDK--PKGFAFVEYESEEIADYA 66
+++GNLD V E+VLYD + G + L P+ D KG+ F+ Y + E +D A
Sbjct: 110 AELFVGNLDSMVDEKVLYDTFSRFGPL--LATPKVARDDANLSKGYGFISYSTFESSDEA 167
Query: 67 IKLFSG 72
I+ G
Sbjct: 168 IEHMHG 173
>gi|119196451|ref|XP_001248829.1| hypothetical protein CIMG_02600 [Coccidioides immitis RS]
gi|392861968|gb|EAS37425.2| splicing factor 3b subunit 4 [Coccidioides immitis RS]
Length = 347
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+GNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ + + RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|347841404|emb|CCD55976.1| hypothetical protein [Botryotinia fuckeliana]
Length = 380
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V L+ + +R + DK
Sbjct: 73 IMN-QVRLFGKPIRVNKASADKQ 94
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V E+ LYD + G ++ I RD E+ KG+ FV Y + E +D A
Sbjct: 100 GAELFIGNLDPMVDEKTLYDTFSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|154294661|ref|XP_001547770.1| hypothetical protein BC1G_13457 [Botryotinia fuckeliana B05.10]
Length = 381
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 14 ATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDAEYAAR 73
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V L+ + +R + DK
Sbjct: 74 IMN-QVRLFGKPIRVNKASADKQ 95
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V E+ LYD + G ++ I RD E+ KG+ FV Y + E +D A
Sbjct: 101 GAELFIGNLDPMVDEKTLYDTFSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDA 159
Query: 67 IKLFSG 72
I +G
Sbjct: 160 IANMNG 165
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVSE +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ +Y + +R
Sbjct: 70 AIKVMN-MIKVYGKPIR 85
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD +T KGFAF+ + S +
Sbjct: 95 NLDVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ +G L NR T+ +A + K ++ S L+++
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKESKGERHGSAAERLLAAQ 198
>gi|71021191|ref|XP_760826.1| hypothetical protein UM04679.1 [Ustilago maydis 521]
gi|46100200|gb|EAK85433.1| hypothetical protein UM04679.1 [Ustilago maydis 521]
Length = 294
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N YIGN+D++ ++ ++++++IQAG +V+L++P+D+ T +G+AF E+++E+ ADY
Sbjct: 10 NQDATCYIGNIDDRANDAIVWELMIQAGPLVNLHLPKDRITQSHQGYAFAEFQTEQDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ +G+ LY + +R + D+
Sbjct: 70 ACKVMNGL-KLYGKPIRVNKASNDR 93
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++G+LD V ER+LY+ G ++ L I RD + +PKGFAFV ++S E AD A
Sbjct: 99 GANLFVGSLDPAVDERLLYETFSAFGGIIGLPKIARDPTSGEPKGFAFVSFDSFEAADAA 158
Query: 67 IKLFSGIVTL-YNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
I+ +G L N T+ +A+ KN + L + ++R +
Sbjct: 159 IEALNGQFLLNKNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 203
>gi|320040614|gb|EFW22547.1| splicing factor 3b subunit 4 [Coccidioides posadasii str.
Silveira]
Length = 347
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+GNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ + + RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|258569671|ref|XP_002543639.1| splicing factor 3B subunit 4 [Uncinocarpus reesii 1704]
gi|237903909|gb|EEP78310.1| splicing factor 3B subunit 4 [Uncinocarpus reesii 1704]
Length = 348
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+GNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADKQ 94
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ + + RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV++ +L+++ +QAG VV + +P+D+ T +GF F+E+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV++GNLD +V E++L+D G ++ + I RD ET KGFAFV + S E
Sbjct: 95 NMDVGANVFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNRTL 81
+D AI+ +G L NR +
Sbjct: 155 SDSAIEAMNGQF-LCNRAI 172
>gi|343425574|emb|CBQ69109.1| related to spliceosome-associated protein SAP-49 [Sporisorium
reilianum SRZ2]
Length = 272
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N YIGN+D++ ++ ++++++IQAG +V+L++P+D+ T +G+AF E+++E+ ADY
Sbjct: 10 NQDATCYIGNIDDRATDAIVWELMIQAGPLVNLHLPKDRITQTHQGYAFAEFQTEQDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ +G+ LY + +R + D+
Sbjct: 70 ACKVMNGL-KLYGKPIRVNKASNDR 93
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++G+LD V ER+LY+ G ++ L + RD + +PKGFAFV ++S E AD A
Sbjct: 99 GANLFVGSLDAAVDERLLYETFSAFGGILGLPKVARDPASGEPKGFAFVSFDSFEAADAA 158
Query: 67 IKLFSGIVTL-YNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
I+ +G L N T+ +A+ KN + L + ++R +
Sbjct: 159 IEALNGQFLLNKNITVDYAIKKDSKNGERHGTAAERLLAAQARKN 203
>gi|303322388|ref|XP_003071187.1| Splicing factor 3B subunit 4 , putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240110886|gb|EER29042.1| Splicing factor 3B subunit 4 , putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 347
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+GNLDE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYASR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ + V LY + +R + DK
Sbjct: 73 IMN-QVRLYGKPIRVNKASADK 93
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ + + RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGPLISMPKVARD-DANLSKGYGFVSFANFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|156048690|ref|XP_001590312.1| hypothetical protein SS1G_09077 [Sclerotinia sclerotiorum 1980]
gi|154693473|gb|EDN93211.1| hypothetical protein SS1G_09077 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 380
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 12 ATVYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQNHQGYGFVEFISEEDAEYAAR 71
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V L+ + +R + DK
Sbjct: 72 IMN-QVRLFGKPIRVNKASADKQ 93
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V E+ LYD + G ++ I RD E+ KG+ FV Y + E +D A
Sbjct: 99 GAELFIGNLDPMVDEKTLYDTFSRFGSLISPPKIARD-ESSLSKGYGFVSYANFEASDDA 157
Query: 67 IKLFSG 72
I +G
Sbjct: 158 IANMNG 163
>gi|240277045|gb|EER40555.1| splicing factor 3b subunit 4 [Ajellomyces capsulatus H143]
Length = 247
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGNLDE++++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYIGNLDERITDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 IMNQ-VRLYGKPIRVNKASADKQ 94
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ I RD + + KG+ FV + + E +D A
Sbjct: 100 GAELFVGNLDPMVTEQVLYDTFSRFGSLISAPKIARD-DANLSKGYGFVSFSNFEASDDA 158
Query: 67 IKLFSG 72
I +G
Sbjct: 159 IANMNG 164
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV+E +L+++ +QAG VV++++P+D+ + +G+ FVE+ +EE ADY
Sbjct: 10 NQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
A+++ + ++ LY + +R
Sbjct: 70 AMRIMN-MIKLYGKPIR 85
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KG+AF+ + S E
Sbjct: 95 NLDIGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRAITISYAFKKDSKGERHGSAAERLLAAQSPLS 202
>gi|440632279|gb|ELR02198.1| hypothetical protein GMDG_00991 [Geomyces destructans 20631-21]
Length = 352
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VY+GN+DE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA +
Sbjct: 13 ATVYVGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYAAR 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ + V LY + +R + DK
Sbjct: 73 VMNQ-VRLYGKPIRVNKASADKQ 94
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNL + E LYD + G ++ I RD T KG+AF+ Y S + AD A
Sbjct: 100 GANLFLGNLSPHLDEHSLYDTFSRFGALLAPPKIARDPTTALSKGYAFLSYASFDAADDA 159
Query: 67 IKLFSGIVTLYNRTL 81
+ G TL +R +
Sbjct: 160 VANMHG-QTLLDRAI 173
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV++ +L+++ +Q+G VV + +P+D+ T+ +GF FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + ++
Sbjct: 70 AIKIMN-MIKLYGKPIK 85
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N+++GNLD +V E++L+D G ++ + I RD ET KGFAFV + S E
Sbjct: 95 NMDVGANIFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ SG L NR T+ +A K ++ + L+++
Sbjct: 155 SDSAIEAMSGQF-LCNRAITVSYAFKKDAKGERHGTAAERMLAAQ 198
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKV+E +L ++ IQ G VV+ ++P+D+ T +G+ FVE+ SE+ ADY
Sbjct: 8 NQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADY 67
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ L+ + +R
Sbjct: 68 AIKILN-MIKLFGKPVR 83
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KGFAF+ Y S E
Sbjct: 93 NLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEA 152
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
AD A++ +G L NR T+ FA K ++ S L+++
Sbjct: 153 ADAALEAMNG-QYLCNRPITISFAFKKDGKGERHGSAAERLLAAQ 196
>gi|357614441|gb|EHJ69078.1| spliceosomal protein on the X [Danaus plexippus]
Length = 334
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD++V+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV+IGNLD +V E++LYD G ++ + RD ET K FAF+ + S E
Sbjct: 95 NLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEA 154
Query: 63 ADYAIK 68
+D AI+
Sbjct: 155 SDAAIE 160
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKV+E +L ++ IQ G VV+ ++P+D+ T +G+ FVE+ SE+ ADY
Sbjct: 8 NQDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADY 67
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ L+ + +R
Sbjct: 68 AIKILN-MIKLFGKPVR 83
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KGFAF+ Y S E
Sbjct: 93 NLDVGANLFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEA 152
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
AD A++ +G L NR T+ FA K ++ S L+++
Sbjct: 153 ADAALEAMNG-QYLCNRPITISFAFKKDGKGERHGSAAERLLAAQ 196
>gi|453083918|gb|EMF11963.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 387
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLDE+ ++ +++++++QAG V+++++P+D+ T +G+ FVE+ SE+ ADYA K+
Sbjct: 15 LYIGNLDERCTDPLIWELMLQAGPVINVHLPKDRVTQSHQGYGFVEFGSEDDADYACKIM 74
Query: 71 SGIVTLYNRTLRFALSGQDKNTQN 94
+ I LY + +R + D+ N
Sbjct: 75 NQI-RLYGKPIRVNKASADRRGPN 97
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 12 YIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++GNLD V E+VLY+ + G +V + RD E++ KG+ FV Y + E +D AI+
Sbjct: 114 FVGNLDNMVDEKVLYETFSRFGPLVAAPKVARD-ESNLSKGYGFVSYAAFEASDQAIEHM 172
Query: 71 SG 72
G
Sbjct: 173 HG 174
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+K +E +L+++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKATETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S E +D A
Sbjct: 99 GANIFIGNLDLEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+ +G L NR ++ +A K ++ S L+++ S
Sbjct: 159 MDAMNG-QYLCNRPISVSYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|357612263|gb|EHJ67888.1| spliceosomal protein on the X [Danaus plexippus]
Length = 259
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD++V+E +L+++ +QAG VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV+IGNLD +V E++LYD G ++ + RD ET K FAF+ + S E
Sbjct: 95 NLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEA 154
Query: 63 ADYAIK 68
+D AI+
Sbjct: 155 SDAAIE 160
>gi|403216887|emb|CCK71383.1| hypothetical protein KNAG_0G03260 [Kazachstania naganishii CBS
8797]
Length = 201
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
NS N+Y+GN+D +V+ LY++ +QA VV L PRDK P+G+AFV S + ADY
Sbjct: 3 NSTTNLYVGNIDPRVTREQLYELFVQACPVVSLRYPRDKVLQTPQGYAFVGVPSVQDADY 62
Query: 66 AIKLFSGIVTLYNRTLRF 83
A++L VTL+ R L+
Sbjct: 63 AVQLLHNCVTLHGRPLKI 80
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEK +E +L+++ +QAG VV++++P+D+ T + +G+ FVE+ +EE ADY
Sbjct: 10 NQDATIYVGGLDEKTTESILWELFLQAGPVVNVHMPKDRITMQHQGYGFVEFMTEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
A+++ + ++ L+ + +R
Sbjct: 70 AMRIMN-MIKLFGKPIR 85
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KG+AF+ + S E
Sbjct: 95 NLDIGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 155 SDAAIEAMNG-QYLCNRAITISYAFKKDSKGERHGSAAERLLAAQSPLSQ 203
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKVS+ +L+++ +QAG +V +++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDEKVSDNLLWELFVQAGPIVSVHMPKDRITGLHQGYGFVEFLGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAFV + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFVNFASFEA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI +G L NR ++ +A K ++ S L+++ S
Sbjct: 155 SDAAIDAMNG-QYLCNRAISISYAFKKDSKGERHGSAAERLLAAQNPLS 202
>gi|50553138|ref|XP_503979.1| YALI0E15356p [Yarrowia lipolytica]
gi|49649848|emb|CAG79572.1| YALI0E15356p [Yarrowia lipolytica CLIB122]
Length = 225
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
+ N +YIGNLDE V+E +LY++++QAG +V + +P+D+ + +G+ FVEY++E
Sbjct: 9 ADQNPEATLYIGNLDENVTEAILYELMLQAGPIVHINLPKDRVSQTHQGYGFVEYKTEAD 68
Query: 63 ADYAIKLFSGIVTLYNRTLRFALSGQDKN 91
A+YA + + I L+ +++R + S DK
Sbjct: 69 ANYAASIMNQI-WLFGKSIRVSKSASDKQ 96
>gi|351714226|gb|EHB17145.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 297
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LDEKVSE +L+++ +QA VV+ ++P+D+ T + +G+ FVE+ SEE ADY
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQARPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
IK+ + ++ LY + +R
Sbjct: 70 DIKIMN-MIKLYGKPIR 85
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T K +AF+ + S +
Sbjct: 95 NLDIGANIFIGNLDPEIDEKLLYDTFSTFGVILQTPKIMRDPDTGNSKSYAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTP 101
+D AI+ +G L NR T+ +A K + +TP
Sbjct: 155 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKVLASDVPDSTP 194
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +L+++ +Q+G +V++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NRDATIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD +T KGFAF+ + S E
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINFASFEA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|320164028|gb|EFW40927.1| splicing factor 3B subunit 4 [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N N Y+GNLD++V++R+L+++ +QAG V ++IP+D+ + +G+ FVEY +EE A
Sbjct: 7 NRNQDATCYVGNLDDRVNDRLLWELFLQAGPVAHVFIPKDRVSGLQQGYGFVEYPTEEDA 66
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKN 91
+YA K+ + ++ L+ + +R + S K+
Sbjct: 67 EYATKILN-MIKLFGKPIRVSRSTDRKD 93
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++L+D G ++ I RD++ P+GF FV + S E +D A
Sbjct: 97 GANLFIGNLDTEVDEKMLFDTFSAFGVILHTPKIMRDQQNGNPRGFGFVNFASFEASDAA 156
Query: 67 IKLFSG 72
I+ +G
Sbjct: 157 IEAMNG 162
>gi|112983328|ref|NP_001037646.1| spliceosomal protein on the X [Bombyx mori]
gi|109706833|gb|ABG43003.1| spliceosomal protein on the X [Bombyx mori]
Length = 342
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD++V+E +L+++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKVMN-MIKLYGKPVR 85
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G NV+IGNLD +V E++LYD G ++ + RD ET K FAF+ + S E
Sbjct: 95 NLDVGANVFIGNLDPEVDEKLLYDTFSAFGVILQTPKVMRDPETGNSKAFAFINFASFEA 154
Query: 63 ADYAIK 68
+D AI+
Sbjct: 155 SDAAIE 160
>gi|164659882|ref|XP_001731065.1| hypothetical protein MGL_2064 [Malassezia globosa CBS 7966]
gi|159104963|gb|EDP43851.1| hypothetical protein MGL_2064 [Malassezia globosa CBS 7966]
Length = 227
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLDE+V++ +++++++Q G V +Y+P+D+ + +G+AF EY +E A+Y
Sbjct: 8 NQEATCYVGNLDERVTDEIIWELMLQVGPVAHIYLPKDRISQMHQGYAFAEYCTESDAEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A ++ +GI LY + +R +S +K
Sbjct: 68 ACRIMNGI-KLYGKPIRVNMSSNEKQV 93
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V ER+LYD G ++ I RD T++ K + FV ++S E AD A
Sbjct: 97 GANLFVGNLDSGVDERLLYDTFATFGGILGAPRIARDPTTNESKNYGFVSFDSFESADGA 156
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
I+ + L NR T+ +AL KN + L + ++R + V
Sbjct: 157 IESLNNQF-LLNRPMTVMYALRKDAKNGERHGTQAERLVAAQARKNHV 203
>gi|63054583|ref|NP_594001.2| U2 snRNP-associated RNA-binding protein Sap49
[Schizosaccharomyces pombe 972h-]
gi|26399889|sp|O14102.2|SAP49_SCHPO RecName: Full=Spliceosome-associated protein 49
gi|159883972|emb|CAC19730.2| U2 snRNP-associated RNA-binding protein Sap49
[Schizosaccharomyces pombe]
Length = 335
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLDEKV++ +L+++ +QAG VV+++IPRD+ + GF F E+ E+ +Y
Sbjct: 8 NQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A ++ + V L+ + +R + QD+
Sbjct: 68 ACQILNQ-VKLFGKPIRVNRASQDR 91
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N+ G N+++GNLD V ERVLYD G++V + RD E + KG+ FV Y+S E
Sbjct: 94 NTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARD-ENGRSKGYGFVSYDSFET 152
Query: 63 ADYAIK 68
AD AI+
Sbjct: 153 ADAAIE 158
>gi|449016079|dbj|BAM79481.1| similar to cleavage stimulation factor subunit 2 [Cyanidioschyzon
merolae strain 10D]
Length = 300
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S C V+IGN+ V+E +L + L Q G VV L I DKET KPKG+ F EY E A+
Sbjct: 2 SRGSCTVFIGNIPYGVTEDMLLERLQQVGPVVSLRILYDKETGKPKGYGFCEYRDPETAE 61
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTP 101
A++ + + R LR A S Q +N ++ +T P
Sbjct: 62 SAVRNLNERIEFGGRMLRIAPSSQTRNQASAGGSTAP 98
>gi|452841107|gb|EME43044.1| hypothetical protein DOTSEDRAFT_25030 [Dothistroma septosporum
NZE10]
Length = 388
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNLDE+ ++ +++++++QAG V+++++P+D+ T +G+ FVE+ SE+ ADYA K+
Sbjct: 15 LYVGNLDERCTDALVWELMLQAGPVINVHLPKDRVTQSHQGYGFVEFGSEDDADYACKIM 74
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+ I L+ + +R + DK
Sbjct: 75 NQI-RLWGKPIRVNKASADK 93
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 12 YIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+IGNLD E+VLY+ + G +V + RD E++ KG+ FV Y + E +D AI+
Sbjct: 112 FIGNLDSLADEKVLYETFSRFGPLVAAPKVARD-ESNLSKGYGFVSYATFESSDQAIEHM 170
Query: 71 SG 72
G
Sbjct: 171 HG 172
>gi|384494999|gb|EIE85490.1| hypothetical protein RO3G_10200 [Rhizopus delemar RA 99-880]
Length = 246
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VYIGNLDE+ +E +++++++QAG VV++++P+D+ T + + FVE+ +EE ADY
Sbjct: 8 NQEATVYIGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDADY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMT 98
A+K+ + V LY + +R + D+ + T
Sbjct: 68 AMKIMNQ-VRLYGKPVRVNKATSDRKNLDVGAT 99
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G ++IGNLD +V E++LYD G +V+ I RD +T KGF F+ Y++ E
Sbjct: 93 NLDVGATLFIGNLDPEVDEKILYDTFSAFGLIVNTPRISRDPDTGALKGFGFISYDNFES 152
Query: 63 ADYAIKLFSG 72
+D AI+ G
Sbjct: 153 SDAAIEAMDG 162
>gi|255715615|ref|XP_002554089.1| KLTH0E14036p [Lachancea thermotolerans]
gi|238935471|emb|CAR23652.1| KLTH0E14036p [Lachancea thermotolerans CBS 6340]
Length = 209
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 1 MSGNSNSGCN-VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYES 59
M G+S N VY+GN+D KVS+ +LY++ +Q G V + P+DK +GFAFVE+ S
Sbjct: 1 MDGSSTVPANTVYVGNVDPKVSKELLYELFLQIGPVAKIRYPKDKVLQTHQGFAFVEFNS 60
Query: 60 EEIADYAIKLFSGIVTLYNRTLR 82
+ A+YA K + V LY+RTL+
Sbjct: 61 PQDAEYASKCLNNTVRLYDRTLK 83
>gi|429859260|gb|ELA34048.1| splicing factor 3b subunit 4 [Colletotrichum gloeosporioides Nara
gc5]
Length = 363
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+YIGN+DE+ S ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKNTQ 93
+ +GI LY ++LR + DK Q
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQKQ 96
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD V E++LYD + G +V L +++ KGF F+ Y E +D AI
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLVSLPKVAREDSGNSKGFGFISYADFESSDAAI 159
Query: 68 KLFSG-IVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
G + ++++A K ++ L+++ + + VP
Sbjct: 160 ANLHGQYIASKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum]
Length = 152
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV+E +L+++ +QAG VV++++P+D+ + +G+ FVE+ +EE ADY
Sbjct: 10 NQDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
A+++ + ++ LY + +R
Sbjct: 70 AMRIMN-MIKLYGKPIR 85
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEY 57
N + G N++IGNLD +V E++LYD G ++ I RD ET KG+AF+ +
Sbjct: 95 NLDIGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINF 149
>gi|393220802|gb|EJD06288.1| hypothetical protein FOMMEDRAFT_18426 [Fomitiporia mediterranea
MF3/22]
Length = 358
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+VS+ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 8 NQEATVYLGNLDERVSDAIIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 68 ACKIMNQI-KLWGKPIRVNKASSDK 91
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLDE + ER+LYD G + + RD T K KG+ FV Y E AD A
Sbjct: 97 GANLFVGNLDENLDERLLYDTFSAFGMLATTAKVARDPTTGKSKGYGFVSYIDFESADAA 156
Query: 67 IKLFSGIVTLYNRTL--RFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ + L N+ + ++A K ++ + L+++ +++ +P
Sbjct: 157 IEAMNNQF-LMNKAISVQYAFKKDGKGERHGTPAERLLAAQARKNNALPA 205
>gi|449301395|gb|EMC97406.1| hypothetical protein BAUCODRAFT_33122 [Baudoinia compniacensis
UAMH 10762]
Length = 389
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNLDE+ ++ +++++++QAG V+++++P+D+ T +G+ FVE+ SEE ADYA K+
Sbjct: 15 LYVGNLDERCTDSLVWELMLQAGPVINVHLPKDRVTQTHQGYGFVEFGSEEDADYAAKIM 74
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+ I L+ + +R + D+
Sbjct: 75 NQI-RLWGKPIRVNKASADR 93
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
+++GNLD V E++L++ + G ++ + RD + + KG+ F+ Y S E +D AI
Sbjct: 113 AELFVGNLDSMVDEKILFETFSRFGPLIAPPKVARD-DANLSKGYGFISYASFEASDDAI 171
Query: 68 KLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
G L N+ T+++A K ++ L+++ +
Sbjct: 172 ANMHGQY-LMNKEVTVQYAYKKDGKGERHGDPAERALAAQAKK 213
>gi|406865924|gb|EKD18965.1| splicing factor 3b subunit 4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 650
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGN+DE+V++ +++++++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA ++
Sbjct: 15 VYIGNIDERVTDSLVWELMLQAGRIVNVHLPKDRVTQTHQGYGFVEFISEEDAEYAARIM 74
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+ V LY + +R + DK
Sbjct: 75 NQ-VRLYGKPIRVNKASADK 93
Score = 42.7 bits (99), Expect = 0.066, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 5/109 (4%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++IGNLD V E+ LYD + G + I RD E+ KG+ FV Y + E +D A
Sbjct: 100 GAELFIGNLDPMVDEKTLYDTFSRFGSLQAPPKIARD-ESGLSKGYGFVSYATFEASDDA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
I +G L N+ ++++A K ++ L+S +++ VP
Sbjct: 159 IANMNG-QYLMNKDVSVQYAYKKDGKGERHGDEAERMLASSGQKNNVVP 206
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDEKV+E +L+++ +Q G VV++++P+D+ T +G+ F+E+ SE+ ADY
Sbjct: 10 NQDATIYVGGLDEKVTEPLLWELFVQGGPVVNVHMPKDRITLLHQGYGFIEFLSEDDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
A K+ + ++ LY + +R
Sbjct: 70 ACKIMN-MIKLYGKPIR 85
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD T KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPTTGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 155 SDAAIEAMNG-QYLCNRPITISYAFKKDSKGERHGSAAERLLAAQ 198
>gi|149578821|ref|XP_001507009.1| PREDICTED: RNA-binding protein 7-like [Ornithorhynchus anatinus]
Length = 273
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +L+++ QAG V+++ IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDTKVTEELLFELFHQAGPVINVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
+GI L+ R ++ SG +Q++ + + + P+P P
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHVSQDTGSPYSQYGNTSPSNLPMPTP 115
>gi|443918492|gb|ELU38942.1| splicing factor 3b subunit 4 [Rhizoctonia solani AG-1 IA]
Length = 325
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 1 MSG----NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 56
MSG + N+ VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +GF F E
Sbjct: 1 MSGRPQEDRNAEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISQAHQGFGFCE 60
Query: 57 YESEEIADYAIKLFSGIVTLYNRTLRFALSGQDK 90
+ +EE A+YA K+ + I L+ + +R S DK
Sbjct: 61 FLTEEDAEYACKIMNQI-KLWGKPIRVNKSSSDK 93
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IG LD V ER+LYD G + + RD + + KG+ FV Y E AD A
Sbjct: 99 GANLFIGGLDLNVDERLLYDTFSAFGVMSTTAKVARDPASGESKGYGFVSYTDFESADAA 158
Query: 67 IKLFSGIVTLYNRTLR 82
I+ +G L N+ ++
Sbjct: 159 IEAMNGQF-LMNKAIQ 173
>gi|449489183|ref|XP_004176732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Taeniopygia
guttata]
Length = 272
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +++++ QAG V+ + IP+D++ +PK FAFV ++ EE Y ++L
Sbjct: 12 LFVGNLDPKVTEELIFELFHQAGPVITVKIPKDRDG-RPKQFAFVNFKHEESVPYGLRLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVN 117
+GI LY R +R SG Q+ + + + L S + +P P +
Sbjct: 71 NGI-XLYGRPMRIQFRSGSSHAAQDINPSCSQLGSAGTSPPGMPHPAS 117
>gi|432105727|gb|ELK31918.1| RNA-binding protein 7 [Myotis davidii]
Length = 255
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
G + + C +++GNL+ KV+E +L+++ Q G V+ + IP+DK+ KPK FAFV ++ E
Sbjct: 2 GAAEADCTLFVGNLETKVTEELLFELFHQGGPVIKVKIPKDKDG-KPKQFAFVNFKHEVS 60
Query: 63 ADYAIKLFSGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
YA+ L +GI L+ R ++ SG +Q+ S++
Sbjct: 61 VPYAMNLLNGI-KLFGRPIKIQFRSGSSHASQDVSLS 96
>gi|328767802|gb|EGF77850.1| hypothetical protein BATDEDRAFT_33617 [Batrachochytrium
dendrobatidis JAM81]
Length = 308
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +VY+GN++++ ++ +++++ +QAG VV++Y+P+D+ T +G+ FVE+ +E+ A+Y
Sbjct: 8 NKEASVYVGNIEDRATDSLIWELFLQAGPVVNVYLPKDRVTQMHQGYGFVEFMTEQDAEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + +V LY + LR + DK
Sbjct: 68 ASKVMN-MVRLYGKPLRVNKATSDK 91
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 14/149 (9%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD V E+ LYD G + I R+ ET + KG+ FV + + E +D A
Sbjct: 97 GATLFISNLDMTVDEKALYDTFSAFGMIASTPKISRNPETGESKGYGFVSFSTFEASDAA 156
Query: 67 IKLFSGIVTLYNRTLR--FALSGQDKNTQNSSMT----------TTPLSSRKSRSDPVPV 114
I+ +G L NR + +AL K ++ S TT L ++ +D V
Sbjct: 157 IEAMNGQF-LANRAIAVSYALKKDGKGERHGSAAERLLAAQSGKTTALVPNQNFADIPSV 215
Query: 115 PVNGMEISHHSMRISGTRHYSSEEPPPPG 143
P G S G + ++ PPPG
Sbjct: 216 PSAGARYSDMPAAGFGYPTHGTKSGPPPG 244
>gi|310792398|gb|EFQ27925.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 361
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+YIGN+DE+ S ++Y++++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATIYIGNIDERASPAMVYEVMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKNTQ 93
+ +GI LY ++LR + DK Q
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQKQ 96
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD V E++LYD + G ++ L +++ KGF F+ Y E +D AI
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLITLPKVAREDSGNSKGFGFISYADFESSDAAI 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
G L ++++A K ++ L+++ + + VP
Sbjct: 160 ANLHGQYILSKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|403172110|ref|XP_003331254.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169716|gb|EFP86835.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 392
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
G+ N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +E+
Sbjct: 7 GDRNQEATVYMGNLDERCTDALVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEDD 66
Query: 63 ADYAIKLFSGIVTLYNRTLRFALSGQDK 90
A+YA K+ + I LY + +R + D+
Sbjct: 67 AEYACKIMNQI-KLYGKPIRVNKASSDR 93
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V ER+LYD G +V I R+ T + G+ FV YES E AD A
Sbjct: 99 GANLFIGNLDANVDERMLYDTFSTFGTLVQTAKIARNPTTGQSNGYGFVAYESFEAADTA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
I+ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 159 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALP 206
>gi|402078874|gb|EJT74139.1| splicing factor 3B subunit 4 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 409
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N +Y+GNLDE+ E ++++++ Q G VV+L++P D+ + +G+ FVE++S E AD
Sbjct: 8 QNKEATIYVGNLDERFGESLMWEMMTQMGPVVNLHMPMDRVSRTHQGYGFVEFDSPESAD 67
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA + +GI +Y + +R + DK
Sbjct: 68 YAARALNGI-RVYGKVIRVNKASADKQ 93
>gi|346974668|gb|EGY18120.1| splicing factor 3B subunit 4 [Verticillium dahliae VdLs.17]
Length = 498
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPGDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKNTQ 93
+ +G V LY ++LR + DK Q
Sbjct: 73 VMNG-VKLYGKSLRVNKASADKQKQ 96
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD V E++LYD + G ++ L +++ KGF F+ + E +D A+
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAV 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
+ G L ++++A K ++ L+++ + + VP
Sbjct: 160 ENLHGQYLLSKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD +V + +L+++ +Q G V + +PRDK T +G+ FVE+ +E ADY
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+KL + +V LY + LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKALRLNKSAQDR 109
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N + G NV++GNLD V E+ +YD G ++ I RD ET +GF FV +++ E +
Sbjct: 111 NFDVGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEAS 170
Query: 64 DYAIKLFSG 72
D A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD +V + +L+++ +Q G V + +PRDK T +G+ FVE+ +E ADY
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+KL + +V LY + LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKALRLNKSAQDR 109
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N + G NV++GNLD V E+ +YD G ++ I RD ET +GF FV +++ E +
Sbjct: 111 NFDVGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEAS 170
Query: 64 DYAIKLFSG 72
D A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGNLD +V + +L+++ +Q G V + +PRDK T +G+ FVE+ +E ADY
Sbjct: 26 NQDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNHQGYGFVEFRNEVDADY 85
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+KL + +V LY + LR S QD+
Sbjct: 86 ALKLMN-MVKLYGKALRLNKSAQDR 109
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N + G NV++GNLD V E+ +YD G ++ I RD ET +GF FV +++ E +
Sbjct: 111 NFDVGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEAS 170
Query: 64 DYAIKLFSG 72
D A+ +G
Sbjct: 171 DAALAAMNG 179
>gi|358392239|gb|EHK41643.1| hypothetical protein TRIATDRAFT_84569 [Trichoderma atroviride IMI
206040]
Length = 387
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G ++IGNLD V E+VLYD + G ++ + +++ KGF FV Y E +D AI
Sbjct: 100 GAELFIGNLDPMVDEKVLYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAI 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSR-KSR 108
G L ++++A K ++ L+++ KSR
Sbjct: 160 ANLHGQYILSKEVSVQYAFKKDGKGDRHGDQAERSLAAQAKSR 202
>gi|321257040|ref|XP_003193447.1| hypothetical protein CGB_D2450C [Cryptococcus gattii WM276]
gi|317459917|gb|ADV21660.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 308
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDEK ++ +++++++QAG V ++++P+D+ + +GF F E+ SE A+Y
Sbjct: 10 NQEATVYLGNLDEKCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADAEY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + I LY + +R + DK
Sbjct: 70 AVKIMNQI-KLYGKPIRVNKASYDK 93
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V E+ LYD G + D I RD T KG AF+ Y E AD A
Sbjct: 99 GANLFVGNLDPNVDEQTLYDTFSTFGTLADQPKIARDPTTGLSKGHAFIAYNDFEAADLA 158
Query: 67 IKLFSG-IVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
I+ +G T ++A K ++ S L+++ + +P
Sbjct: 159 IENMNGQFFGGKQITAQYAFKKDGKGERHGSQAERLLAAQAKKRQLLP 206
>gi|440293376|gb|ELP86502.1| splicing factor 3B subunit, putative [Entamoeba invadens IP1]
Length = 199
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V +LD++VSE +LY+++IQAG V+ + IPRD+ + + +G +VEY+S+ ADY++K+F
Sbjct: 17 VCCTDLDQQVSEGLLYELMIQAGPVMSVSIPRDRVSGQHRGVGYVEYKSDRDADYSVKIF 76
Query: 71 SGIVTLYNRTLRFALSGQ 88
S V L+ + ++F S Q
Sbjct: 77 SDNVYLFGKLVKFNRSNQ 94
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKG--FAFVEYESE 60
G + G N+++ NLD+ V E +L+ G +V P TD G +AF+ Y+S
Sbjct: 98 GAIDIGANLFVNNLDKSVDESLLHSTFCNFGNLVS---PPKINTDTKSGKVYAFINYDSF 154
Query: 61 EIADYAIKLFSG 72
+ AD AI +G
Sbjct: 155 DAADKAIANLNG 166
>gi|402225695|gb|EJU05756.1| hypothetical protein DACRYDRAFT_62409 [Dacryopinax sp. DJM-731
SS1]
Length = 341
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+V++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERVTDAIIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 8 GCNVYIGNLDEKVSERVLYD------ILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
G N++IGNLD V ER+LYD IL Q ++ RD +T + KG+ F+ Y E
Sbjct: 98 GANLFIGNLDPNVDERLLYDTFSAFGILTQPAKIA-----RDPQTSESKGYGFISYSDFE 152
Query: 62 IADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
+D AI+ + L N+ T+++A K ++ + L+S+ +++ +P+
Sbjct: 153 SSDRAIESMNNQF-LMNKAITVQYAFKKDGKGERHGTDAERMLASQAKKNNALPL 206
>gi|396494938|ref|XP_003844425.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
gi|312221005|emb|CBY00946.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
Length = 344
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY GNL E+V+ R+L+++++ AGRV ++ +P D+ + +GF FVEY +EE ADY
Sbjct: 12 NKEATVYCGNLHERVTPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGFVEYHTEEEADY 71
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I LY +R + DK
Sbjct: 72 APKIMNNI-ALYGTRIRVNKASADK 95
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N G ++IGNLD V E+ LYD Q G +V+ I RD E + KG+ F+ Y E
Sbjct: 98 NVEIGAELFIGNLDAMVDEKTLYDTFGQFGPLVNAPKIARD-EANLSKGYGFISYGDFES 156
Query: 63 ADYAIKLFSG 72
+D AI G
Sbjct: 157 SDAAIASMHG 166
>gi|353227298|emb|CCA77811.1| related to spliceosome-associated protein SAP-49 [Piriformospora
indica DSM 11827]
Length = 298
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N VY+GNLDE+V++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A
Sbjct: 8 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEEDA 67
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKN 91
+YA K+ + I L+ + +R + DK
Sbjct: 68 EYACKIMNQI-KLWGKPIRVNKASSDKK 94
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V ER+LYD G + I RD T + +G FV Y E AD A
Sbjct: 99 GANLFIGNLDPAVDERLLYDTFTVFGPLTQPAKIARDPTTMESRGHGFVSYADFESADAA 158
Query: 67 IK 68
I+
Sbjct: 159 IE 160
>gi|398394106|ref|XP_003850512.1| hypothetical protein MYCGRDRAFT_46623 [Zymoseptoria tritici
IPO323]
gi|339470390|gb|EGP85488.1| hypothetical protein MYCGRDRAFT_46623 [Zymoseptoria tritici
IPO323]
Length = 343
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNLDE+ ++ +++++++QAG V+++++PRD+ T +G+ FVE+ SE+ ADYA K+
Sbjct: 15 LYVGNLDERCTDALVWELMLQAGPVINVHLPRDRVTQNHQGYGFVEFGSEDDADYACKIM 74
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+ I ++ + +R + DK
Sbjct: 75 NQI-RVHGKPIRVNKASADK 93
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYAI 67
+++GNLD V E+VLY+ I+ G++V I RD + + KG+ FV Y E +D AI
Sbjct: 107 AELFVGNLDSLVDEKVLYETFIRFGQLVAAPKIARD-DANLSKGYGFVSYAGFEASDAAI 165
Query: 68 KLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
+ G L N+ T+++A K ++ L+++ +
Sbjct: 166 EHMHG-QYLMNKEVTVQYAYKKDGKGERHGDEAERALAAQAKK 207
>gi|45185171|ref|NP_982888.1| ABL059Wp [Ashbya gossypii ATCC 10895]
gi|44980807|gb|AAS50712.1| ABL059Wp [Ashbya gossypii ATCC 10895]
gi|374106091|gb|AEY95001.1| FABL059Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N+ C VY+GNLD +VS+ +LY++ +Q V + P+DK + +GFAFVE SE
Sbjct: 2 DQNTECTVYVGNLDPQVSKELLYELFVQVAPVSRIRYPKDKVKQEHQGFAFVELFSEADC 61
Query: 64 DYAIKLFSGIVTLYNRTLR 82
D+AIK + V+L+ + L+
Sbjct: 62 DFAIKSLNNTVSLFGKVLK 80
>gi|358389660|gb|EHK27252.1| hypothetical protein TRIVIDRAFT_229059 [Trichoderma virens
Gv29-8]
Length = 385
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G ++IGNLD V E++LYD + G ++ + +++ KGF FV Y E +D AI
Sbjct: 100 GAELFIGNLDPMVDEKILYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAI 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSR-KSR 108
G L ++++A K ++ L+++ KSR
Sbjct: 160 SNLHGQYILSKEVSVQYAFKKDGKGERHGDQAERALAAQAKSR 202
>gi|302421316|ref|XP_003008488.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
gi|261351634|gb|EEY14062.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
Length = 295
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA +
Sbjct: 68 VYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPSDAEYAANVM 127
Query: 71 SGIVTLYNRTLRFALSGQDKNTQ 93
+G V LY ++LR + DK Q
Sbjct: 128 NG-VKLYGKSLRVNKASADKQKQ 149
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD V E++LYD + G ++ L +++ KGF F+ + E +D A+
Sbjct: 153 GAELFVGNLDPMVDEKILYDTFSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAV 212
Query: 68 KLFSG 72
+ G
Sbjct: 213 ENLHG 217
>gi|384500250|gb|EIE90741.1| hypothetical protein RO3G_15452 [Rhizopus delemar RA 99-880]
Length = 246
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ +E +++++++QAG VV++++P+D+ T + + FVE+ +EE ADY
Sbjct: 8 NQEATVYVGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDADY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMT 98
A+++ + V LY + +R + D+ + T
Sbjct: 68 AMRVMNQ-VRLYGKPVRVNKATSDRKNLDVGAT 99
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G ++IGNLD +V E++LYD G +V+ + RD +T KGF F+ +++ E
Sbjct: 93 NLDVGATLFIGNLDPEVDEKLLYDTFSAFGLIVNTPRVSRDPDTGALKGFGFISFDNFES 152
Query: 63 ADYAIKLFSG 72
+D AI+ G
Sbjct: 153 SDAAIEAMDG 162
>gi|254584372|ref|XP_002497754.1| ZYRO0F12716p [Zygosaccharomyces rouxii]
gi|238940647|emb|CAR28821.1| ZYRO0F12716p [Zygosaccharomyces rouxii]
Length = 210
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MS NSN ++Y+GN+D KV++ LY++ +Q + + P+DK +G+AFVE+ S
Sbjct: 1 MSSNSNRDTSIYVGNIDPKVTKAQLYELFVQISPIRRIRYPKDKVLQIHQGYAFVEFYSV 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRF 83
E Y +++ + +V+LY+RTLR
Sbjct: 61 EDVQYVLRVMNNVVSLYDRTLRI 83
>gi|340522320|gb|EGR52553.1| predicted protein [Trichoderma reesei QM6a]
Length = 386
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 8 ATVYIGNIDERATPAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAAN 67
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY ++LR + DK
Sbjct: 68 VMNGI-KLYGKSLRVNKASADKQ 89
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G ++IGNLD V E++LYD + G ++ + +++ KGF FV Y E +D AI
Sbjct: 95 GAELFIGNLDPMVDEKILYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAI 154
Query: 68 KLFSGIVTL 76
G L
Sbjct: 155 ANLHGQYIL 163
>gi|328860868|gb|EGG09973.1| hypothetical protein MELLADRAFT_71116 [Melampsora larici-populina
98AG31]
Length = 382
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
G+ N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +E+
Sbjct: 7 GDRNQEATVYMGNLDERCTDALVWELMLQAGPVVNVHLPKDRVSMSHQGYGFCEFLTEDD 66
Query: 63 ADYAIKLFSGIVTLYNRTLRFALSGQDK 90
A+YA K+ + I LY + +R + D+
Sbjct: 67 AEYACKIMNQI-KLYGKPIRVNKASSDR 93
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V ER+LYD G +V I R+ T + G+ FV YES E AD A
Sbjct: 99 GANLFIGNLDVNVDERMLYDTFNTFGTLVQTAKIARNPSTGQSNGYGFVAYESFESADTA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
I+ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 159 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALP 206
>gi|380481860|emb|CCF41594.1| splicing factor 3B subunit 4 [Colletotrichum higginsianum]
Length = 257
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+YIGN+DE+ S ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKNTQ 93
+ +GI LY ++LR + DK Q
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQKQ 96
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +++GNLD V E++LYD + G +V+L +++ KGF F+ Y E +D AI
Sbjct: 100 GAELFVGNLDPMVDEKILYDTFSRFGPLVNLPKVAREDSGNSKGFGFISYADFESSDAAI 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
G L ++++A K ++ L+++ + + VP
Sbjct: 160 SNLHGQYILSKEVSVQYAFKKDGKGERHGDAAERELAAQAKKRNIVP 206
>gi|302693156|ref|XP_003036257.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune
H4-8]
gi|300109953|gb|EFJ01355.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune
H4-8]
Length = 329
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 1 MSG----NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVE 56
MSG + N VY+GNLDE+V++ +++++++QAG VV++++P+D+ + +G+ F E
Sbjct: 1 MSGRPQDDRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRISMSHQGYGFCE 60
Query: 57 YESEEIADYAIKLFSGIVTLYNRTLRFALSGQDK 90
+ +EE A+YA K+ + I L+ + +R + DK
Sbjct: 61 FLTEEDAEYACKIMNQI-KLWGKPIRVNKASSDK 93
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + + RD T KG+ FV + E +D A
Sbjct: 99 GANLFIGNLDENVDERLLYDTFSAFGMMATTAKVARDPGTGTSKGYGFVSFTDFEASDAA 158
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ +G L N+ T+++A K ++ + L+++ +++ +P+
Sbjct: 159 IEAMNGQF-LMNKAITVQYAFKKDGKGERHGTSAERLLAAQARKNNALPM 207
>gi|169612257|ref|XP_001799546.1| hypothetical protein SNOG_09247 [Phaeosphaeria nodorum SN15]
gi|160702468|gb|EAT83439.2| hypothetical protein SNOG_09247 [Phaeosphaeria nodorum SN15]
Length = 306
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GNL E+VS R+L+++++ AGRV ++ +P D+ + +GF FVE+ +EE AD
Sbjct: 8 QNKEATVYVGNLHERVSPRILHELMLNAGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEAD 67
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDK 90
YA K+ + ++ NR +R + DK
Sbjct: 68 YAPKVMNNVMLHGNR-IRVNKASADK 92
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N G ++IGNLD+ V E+ LYD Q G +++ + RD E++ KG+ F+ Y E
Sbjct: 95 NVEIGAELFIGNLDQMVDEKTLYDTFGQFGPLINAPKVARD-ESNMSKGYGFISYGDFES 153
Query: 63 ADYAIKLFSG 72
+D AI G
Sbjct: 154 SDAAIASMHG 163
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LDE+V E +L+++ +Q G VV + +P+DK +K FAF+EY+SE A+Y
Sbjct: 9 NEEATLYVGGLDERVDEELLWELFLQFGPVVSVSMPKDKVLNKHMEFAFIEYQSEIDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A + I TLY R +R S +D+ T
Sbjct: 69 ASHVCDNI-TLYGRKIRVNKSNKDRPT 94
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++I NL V+E ++ Q G++ + I RD ET+ KG AFV Y S E +D+
Sbjct: 98 GADLFISNLAPDVTEDMIKTTFSQFGQLACEPIIARDPETNISKGHAFVNYTSFESSDFV 157
Query: 67 IKLFSG 72
I+ +G
Sbjct: 158 IESMNG 163
>gi|302762268|ref|XP_002964556.1| hypothetical protein SELMODRAFT_3379 [Selaginella moellendorffii]
gi|302825197|ref|XP_002994230.1| hypothetical protein SELMODRAFT_3378 [Selaginella moellendorffii]
gi|300137901|gb|EFJ04697.1| hypothetical protein SELMODRAFT_3378 [Selaginella moellendorffii]
gi|300168285|gb|EFJ34889.1| hypothetical protein SELMODRAFT_3379 [Selaginella moellendorffii]
Length = 204
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD +V+E +L+++ Q RV +YIPRDK T G+ FVE +E DY
Sbjct: 3 NQDATAYVGNLDPQVTEDILWELFTQVARVQSVYIPRDKITTAHSGYGFVELANETAVDY 62
Query: 66 AIKLFSGIVTLYNRTLRFA-LSGQDKNT 92
A+K+ + LY R +R + S +D+N
Sbjct: 63 AVKILNN-CRLYGRCIRMSKASHKDENV 89
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N G N+++GNL V +L I GRVV + + +P G+ FV Y+ E +
Sbjct: 86 DENVGANLFVGNLSRTVDNYLLGSIFSGFGRVVYSSVVHSDDQTRP-GYGFVHYDCFEAS 144
Query: 64 DYAIK 68
D AI+
Sbjct: 145 DLAIE 149
>gi|342879058|gb|EGU80333.1| hypothetical protein FOXB_09130 [Fusarium oxysporum Fo5176]
Length = 375
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 31 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAAN 90
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY ++LR + DK
Sbjct: 91 VMNGI-KLYGKSLRVNKASADKQ 112
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G ++IGNLD V E++LYD + G ++ L +E+ KGF FV + E +D AI
Sbjct: 118 GAELFIGNLDPMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAI 177
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
G L ++++A K ++ L+++ + + VP
Sbjct: 178 ANLHGQYILSKEVSVQYAFKKDGKGERHGDEAERELAAQAKKRNIVP 224
>gi|46125929|ref|XP_387518.1| hypothetical protein FG07342.1 [Gibberella zeae PH-1]
Length = 357
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G ++IGNLD V E++LYD + G ++ L +E+ KGF FV + E +D AI
Sbjct: 100 GAELFIGNLDSMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAI 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
G L ++++A K ++ L++ + + VP
Sbjct: 160 DTLHGQYILSKEVSVQYAFKKDGKGERHGDQAERSLAAEAKKRNIVP 206
>gi|408396492|gb|EKJ75649.1| hypothetical protein FPSE_04150 [Fusarium pseudograminearum
CS3096]
Length = 357
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
VYIGN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI LY ++LR + DK
Sbjct: 73 VMNGI-KLYGKSLRVNKASADKQ 94
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G ++IGNLD V E++LYD + G ++ L +E+ KGF FV + E +D AI
Sbjct: 100 GAELFIGNLDSMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAI 159
Query: 68 KLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
G L ++++A K ++ L++ + + VP
Sbjct: 160 DTLHGQYILSKEVSVQYAFKKDGKGERHGDQAERSLAAEAKKRNIVP 206
>gi|401623525|gb|EJS41622.1| hsh49p [Saccharomyces arboricola H-6]
Length = 213
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ ++NSG VY+GN+D ++++ LY++ IQ ++ + P+DK +G+AF+E+ ++
Sbjct: 1 MNYSTNSGNTVYVGNIDPRITKEQLYELFIQINPILRIKYPKDKVLQTYQGYAFIEFYNK 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP---VN 117
E A Y I + + V LY+R ++ +S+ TT LSS S+ +P+ V
Sbjct: 61 EDAQYVILIMNNTVKLYDRLIKV-------RQVTNSVGTTNLSSNSSKDISLPIAKLFVK 113
Query: 118 GMEISHHSMRISGTRHYSSEEPPPPGVTHESNG 150
+ S +++ + + P + H SNG
Sbjct: 114 NLAESVDIDQLAKIFNKFGKTVNKPEIFHLSNG 146
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+G LD+KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQDATIYVGGLDDKVTEPLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++L+D G ++ I RD ++ KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLFDTFSAFGVILQTPKIMRDPDSGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|389644502|ref|XP_003719883.1| splicing factor 3B subunit 4 [Magnaporthe oryzae 70-15]
gi|351639652|gb|EHA47516.1| splicing factor 3B subunit 4 [Magnaporthe oryzae 70-15]
gi|440470016|gb|ELQ39105.1| splicing factor 3B subunit 4 [Magnaporthe oryzae Y34]
gi|440486255|gb|ELQ66139.1| splicing factor 3B subunit 4 [Magnaporthe oryzae P131]
Length = 407
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GNLDE+ E ++++++ Q G VV+L++P D+ + +G+ FVE+++ E AD
Sbjct: 8 QNKEATVYVGNLDERFGEALMWEMMTQMGPVVNLHMPMDRVSRTHQGYGFVEFDTPESAD 67
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA + +GI ++ + +R + DK
Sbjct: 68 YAARALNGI-RVFGKVIRVNKASADKQ 93
>gi|449543395|gb|EMD34371.1| hypothetical protein CERSUDRAFT_140831 [Ceriporiopsis
subvermispora B]
Length = 323
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ S+ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCSDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD T K KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPSTGKSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
++ +G L N+ T+++A K ++ + L+++ +++ +PV
Sbjct: 158 VESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALPV 206
>gi|390598508|gb|EIN07906.1| hypothetical protein PUNSTDRAFT_88604 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 343
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ ++++++IQAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALIWELMIQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ERVLYD G + I RD T + KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERVLYDTFSAFGVISTTAKIARDPSTGQSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ +G L N+ T+++A K ++ + L+++ +++ +PV
Sbjct: 158 IESMNGQF-LMNKPITVQYAFKKDGKGERHGTPAERLLAAQARKNNALPV 206
>gi|393238609|gb|EJD46145.1| hypothetical protein AURDEDRAFT_113809 [Auricularia delicata
TFB-10046 SS5]
Length = 312
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N VY+GNLDE+V++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A
Sbjct: 7 DRNQEATVYLGNLDERVTDAIVWELMLQAGPVVNVHLPKDRISMSHQGYGFCEFLTEEDA 66
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDK 90
+YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRV-VDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD +T KG+ F+ Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFTAFGLLSAPAKIARDPQTMASKGYGFISYADFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
I+ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 158 IENMNG-QYLMNKPITVQYAFKKDGKGERHGTPAERLLAAQARKNNALP 205
>gi|189189942|ref|XP_001931310.1| spliceosome-associated protein 49 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972916|gb|EDU40415.1| spliceosome-associated protein 49 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 329
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GNL E+V+ R+L+++++ GRV ++ +P D+ + +GF FVE+ +EE AD
Sbjct: 11 QNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEAD 70
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDK 90
YA K+ + V LY +R + DK
Sbjct: 71 YAPKIMNN-VALYGSRIRVNKASADK 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N G ++IGNLD V ER LYD Q G +V+ I RD+ T + KG+ F+ Y E
Sbjct: 98 NVEIGAELFIGNLDHGVDERTLYDTFGQFGPLVNAPKIARDEVTSESKGYGFISYGDFES 157
Query: 63 ADYAI 67
+D AI
Sbjct: 158 SDAAI 162
>gi|58261610|ref|XP_568215.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115791|ref|XP_773609.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256235|gb|EAL18962.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230297|gb|AAW46698.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 304
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG V ++++P+D+ + +GF F E+ SE A+Y
Sbjct: 10 NQEATVYLGNLDERCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADAEY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + I LY + +R + DK
Sbjct: 70 AVKIMNQI-KLYGKPIRVNKASYDK 93
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V E+ LYD G + + I RD T KG AF+ Y E AD A
Sbjct: 99 GANLFVGNLDPNVDEQTLYDTFSTFGTLAEQPKIARDPTTGLSKGHAFIAYNDFEAADLA 158
Query: 67 IKLFSG-IVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ +G T ++A K ++ S L+++ + +P
Sbjct: 159 IENMNGQFFGGKQITAQYAFKKDGKGERHGSQAERLLAAQAKKRQLLPA 207
>gi|320587367|gb|EFW99847.1| splicing factor 3b subunit 4 [Grosmannia clavigera kw1407]
Length = 414
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 1 MSG---NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 57
MSG N VY+GNLDE+ SE ++++++ Q G VV++++P D+ + +GF FVE+
Sbjct: 1 MSGRHWEQNKEATVYVGNLDERFSEPLMWELMTQMGPVVNVHMPMDRVSRLHQGFGFVEF 60
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKN 91
++ E A+YA + +GI LY + +R + D+
Sbjct: 61 DTPESAEYASRTLNGI-RLYGKPVRVNKASADRQ 93
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++ NLD +V E++LYD Q GR+V + RD+ KG+ FV ++S + +D A
Sbjct: 99 GAELFVNNLDPQVDEKILYDTFAQFGRLVAPPNVVRDQNNIS-KGYGFVSFDSFDASDTA 157
Query: 67 IKLFSGIVTL 76
G L
Sbjct: 158 RDAMQGQYLL 167
>gi|330934048|ref|XP_003304396.1| hypothetical protein PTT_16975 [Pyrenophora teres f. teres 0-1]
gi|311319032|gb|EFQ87532.1| hypothetical protein PTT_16975 [Pyrenophora teres f. teres 0-1]
Length = 328
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GNL E+V+ R+L+++++ GRV ++ +P D+ + +GF FVE+ +EE AD
Sbjct: 11 QNKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQGFGFVEFHTEEEAD 70
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDK 90
YA K+ + V LY +R + DK
Sbjct: 71 YAPKIMNN-VALYGSRIRVNKASADK 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N G ++IGNLD V ER LYD Q G +V+ I RD+ T + KG+ F+ Y E
Sbjct: 98 NVEIGAELFIGNLDHGVDERTLYDTFGQFGPLVNAPKIARDEVTSESKGYGFISYGDFES 157
Query: 63 ADYAI 67
+D AI
Sbjct: 158 SDAAI 162
>gi|326933347|ref|XP_003212767.1| PREDICTED: RNA-binding protein 7-like [Meleagris gallopavo]
Length = 277
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +++++ QAG V+ + IP+DK+ K K FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDPKVTEELIFELFHQAGPVIKVKIPKDKDG-KQKQFAFVSFKHEESVPYGMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMTTTP 101
+GI LY R + SG +Q+S++ P
Sbjct: 71 NGI-KLYGRPINIQFRSGSSHASQDSNLACLP 101
>gi|405119657|gb|AFR94429.1| splicing factor 3b subunit 4 [Cryptococcus neoformans var. grubii
H99]
Length = 304
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG V ++++P+D+ + +GF F E+ SE A+Y
Sbjct: 10 NQEATVYLGNLDERCTDALIWELMLQAGPVSNVFLPKDRISQAHQGFGFCEFMSEADAEY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + I LY + +R + DK
Sbjct: 70 AVKIMNQI-KLYGKPIRVNKASYDK 93
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLD V E+ LYD G + + I RD T KG AF+ Y E AD A
Sbjct: 99 GANLFVGNLDPNVDEQTLYDTFSTFGTLAEQPKIARDPTTGLSKGHAFIAYNDFEAADLA 158
Query: 67 IKLFSG-IVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ +G T ++A K ++ S L+++ + +P
Sbjct: 159 IENMNGQFFGGKQITAQYAFKKDGKGERHGSQAERLLAAQAKKRQLLPA 207
>gi|326430602|gb|EGD76172.1| splicing factor 3b [Salpingoeca sp. ATCC 50818]
Length = 256
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LD++ +E +L+++ QAG VV +++P+D+ T +G+ FVE+ EE A+Y
Sbjct: 9 NQDATVYVGGLDDRATESLLWELFQQAGPVVSVHMPKDRVTGLHQGYGFVEFLGEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQN 94
A+K+ + ++ LY + +R + TQ+
Sbjct: 69 ALKIMN-MINLYGKPIRVNKAASHTRTQD 96
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+YIGNLD V E++LYD G ++ I RD +T KG+AFV Y + E +D A
Sbjct: 98 GANLYIGNLDPSVDEKLLYDTFSAFGVILQHPKIMRDPDTGASKGYAFVNYANFEASDAA 157
Query: 67 IKLFSGIVTLYNRTLR--FALSGQDKNTQNSSMTTTPLSSRK 106
IK +G L NR + +A K ++ S L+++K
Sbjct: 158 IKAMNGQY-LCNRNINVTYAFKKDTKGERHGSAAERLLAAQK 198
>gi|223995445|ref|XP_002287396.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976512|gb|EED94839.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 305
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLD V+E +L ++ Q GRV +++P+DK T G+ FVE+ ADY
Sbjct: 2 NQEATCYVGNLDPSVTEDILVELFTQIGRVSSVHMPKDKITGLHSGYGFVEFLDVTDADY 61
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSM 97
AI++ S +V L++R LR S DK T S+
Sbjct: 62 AIQIMS-MVKLFSRPLRVNKSSLDKKTGVGSL 92
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 3 GNSNSGCNVYIGNLD-EKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESE 60
G+ + G N++IGNLD V E++LYD G ++ I RD T++ KGF FV +++
Sbjct: 90 GSLDVGANLFIGNLDPADVDEKLLYDTFSAFGTIIRPPKIMRDDMTNQSKGFGFVSFDAF 149
Query: 61 EIADYAIK 68
E +D AI+
Sbjct: 150 EASDLAIE 157
>gi|392596200|gb|EIW85523.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 322
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ S+ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCSDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD+ V ER+LYD G + I RD + KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDDNVDERLLYDTFSAFGLMATTAKIARDPGSGMSKGYGFVSYIDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
++ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 158 VEAMNGQY-LMNKPLTVQYAFKKDGKGERHGTSAERTLAAQARKNNALP 205
>gi|344293100|ref|XP_003418262.1| PREDICTED: RNA-binding protein 7-like [Loxodonta africana]
Length = 268
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLEAKVTEEILFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSM 97
+GI L+ R ++ SG Q+ SM
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHALQDVSM 97
>gi|430811379|emb|CCJ31130.1| unnamed protein product [Pneumocystis jirovecii]
Length = 285
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLDE+ ++ +L+++ +Q G VV++++P+D+ + +GF F E+ + E ADY
Sbjct: 10 NQEATIYVGNLDERTTDAILWELFLQCGPVVNVHLPKDRVSQTHQGFGFCEFLTVEDADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A ++ + I LY + +R + DK
Sbjct: 70 ACRIMNQI-KLYGKPIRVNKASADK 93
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD G +V I RD + + K F F+ ++S E AD A
Sbjct: 100 GAELFVGNLDPLVNEKVLYDTFSVFGMLVAPPKIARD-DNGQSKCFGFISFDSFEAADAA 158
Query: 67 IK 68
I+
Sbjct: 159 IE 160
>gi|403417817|emb|CCM04517.1| predicted protein [Fibroporia radiculosa]
Length = 325
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ S+ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCSDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD + K KG+ FV + E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGSGKSKGYGFVSFTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ +G L N+ T+++A K ++ + L+++ +++ +PV
Sbjct: 158 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALPV 206
>gi|392567732|gb|EIW60907.1| hypothetical protein TRAVEDRAFT_146596 [Trametes versicolor
FP-101664 SS1]
Length = 337
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ S+ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCSDALIWELMLQAGPVVNVHLPKDRISMTHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD + K KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDPTSGKSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHH 124
I+ +G L N+ T+++A K ++ + L+++ +++ +P
Sbjct: 158 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNNALPATARPPPAPMG 216
Query: 125 SMRISGTRHYSSEEPPPPG 143
++ G R PP PG
Sbjct: 217 ALNAFGAR------PPVPG 229
>gi|260800952|ref|XP_002595360.1| hypothetical protein BRAFLDRAFT_118991 [Branchiostoma floridae]
gi|229280606|gb|EEN51372.1| hypothetical protein BRAFLDRAFT_118991 [Branchiostoma floridae]
Length = 247
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL +V+E +LY++ +QAG +V + IP D T KP+ +AF+E++ Y I+L
Sbjct: 12 LWVGNLSSQVTEELLYELFLQAGPLVGVKIPMDANTGKPRSYAFIEFKHAVSVPYTIELM 71
Query: 71 SGIVTLYNRTLRF 83
+GI L+ R+LR
Sbjct: 72 NGI-RLHERSLRL 83
>gi|409082711|gb|EKM83069.1| hypothetical protein AGABI1DRAFT_118461 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200576|gb|EKV50500.1| hypothetical protein AGABI2DRAFT_183573 [Agaricus bisporus var.
bisporus H97]
Length = 296
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 23/158 (14%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD + KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDTGSGISKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV---------- 114
I+ +G L N+ T+++A + K ++ + L+++ +++ +PV
Sbjct: 158 IESMNGQF-LMNKAITVQYAFKKEGKGERHGTAAERLLAAQARKNNALPVTARPPPAPMG 216
Query: 115 -----PVNGMEISHHSMRISGTRHYSSEEPPPPGVTHE 147
P+ G + + + +G ++ PPPPG T +
Sbjct: 217 FGARPPMPGYQGPYQG-QFAGAL---AQPPPPPGFTAQ 250
>gi|409046552|gb|EKM56032.1| hypothetical protein PHACADRAFT_145047 [Phanerochaete carnosa
HHB-10118-sp]
Length = 322
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD ++ + KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPQSGQSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
I+ +G L N+ T+++A K ++ + L+++ +++ +PV
Sbjct: 158 IESMNGQF-LMNKPITVQYAFKKDGKGERHGTPAERLLAAQARKNNALPV 206
>gi|410078732|ref|XP_003956947.1| hypothetical protein KAFR_0D01660 [Kazachstania africana CBS
2517]
gi|372463532|emb|CCF57812.1| hypothetical protein KAFR_0D01660 [Kazachstania africana CBS
2517]
Length = 212
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+GN+D +V++ LY++ +Q GR+ + PRDK D +G+AF+E+ ++ DY +KLF
Sbjct: 9 VYVGNIDPRVNKEDLYELFVQFGRIKKINYPRDKVLDTHQGYAFIEFLNDSTVDYVLKLF 68
Query: 71 --SGIVTLYNRTLRF 83
+ +V+LY R+L+
Sbjct: 69 GNTNLVSLYERSLKI 83
>gi|225708572|gb|ACO10132.1| RNA-binding protein 7 [Osmerus mordax]
Length = 266
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD+KV+E +L+++ +QAG ++ + IP+D + K K F F ++ EE A Y + L
Sbjct: 11 LFVGNLDQKVTEELLFELFLQAGPLIKVKIPKDNDG-KQKSFGFAVFKHEESAPYGMNLL 69
Query: 71 SGIVTLYNRTLRFALSG------QDKNTQNSSMTTT 100
+G +L+ RTL+ +N+QNSS T
Sbjct: 70 NG-TSLFGRTLKVQFRAGSTHINSPENSQNSSPVNT 104
>gi|126326634|ref|XP_001371053.1| PREDICTED: RNA-binding protein 7-like isoform 1 [Monodelphis
domestica]
Length = 276
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDCKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 71 SGIVTLYNRTLRFAL 85
+GI L+ R ++
Sbjct: 71 NGI-KLFGRPIKIQF 84
>gi|299754121|ref|XP_001833772.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
gi|298410613|gb|EAU88064.2| splicing factor 3b subunit 4 [Coprinopsis cinerea okayama7#130]
Length = 332
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+++GNLDE V ER+LYD G + I RD T KG+ FV Y E +D A
Sbjct: 98 GANLFVGNLDENVDERLLYDTFSAFGMMATTAKIARDPSTGVSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSS 96
I+ +G L N+ T+++A K ++ +
Sbjct: 158 IESMNGQF-LMNKAITVQYAFKKDGKGERHGT 188
>gi|403262742|ref|XP_003945221.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Saimiri
boliviensis boliviensis]
Length = 266
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|402895331|ref|XP_003910783.1| PREDICTED: RNA-binding protein 7 [Papio anubis]
Length = 267
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|395520256|ref|XP_003764251.1| PREDICTED: RNA-binding protein 7 isoform 1 [Sarcophilus harrisii]
Length = 276
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDIKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 71 SGIVTLYNRTLRFAL 85
+GI L+ R ++
Sbjct: 71 NGI-KLFGRPIKIQF 84
>gi|57530481|ref|NP_001006318.1| RNA-binding protein 7 [Gallus gallus]
gi|53130199|emb|CAG31450.1| hypothetical protein RCJMB04_6j1 [Gallus gallus]
Length = 279
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +++++ QAG V+ + IP+DK+ K K FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDPKVTEELIFELFHQAGPVIKVKIPKDKDG-KQKQFAFVSFKHEESVPYGMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMTTTP 101
+GI LY R + SG +Q+S+ + P
Sbjct: 71 NGI-KLYGRPINIQFRSGSSHASQDSNSSCLP 101
>gi|426370525|ref|XP_004052213.1| PREDICTED: RNA-binding protein 7 isoform 2 [Gorilla gorilla
gorilla]
Length = 220
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|395520258|ref|XP_003764252.1| PREDICTED: RNA-binding protein 7 isoform 2 [Sarcophilus harrisii]
Length = 270
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDIKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEESVPYGMNLL 70
Query: 71 SGIVTLYNRTLRFAL 85
+GI L+ R ++
Sbjct: 71 NGI-KLFGRPIKIQF 84
>gi|297690283|ref|XP_002822554.1| PREDICTED: RNA-binding protein 7 [Pongo abelii]
Length = 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|395330318|gb|EJF62702.1| hypothetical protein DICSQDRAFT_104224 [Dichomitus squalens
LYAD-421 SS1]
Length = 344
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALIWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD +T K KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGMMATTAKIARDPQTGKSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
I+ +G L N+ T+++A K ++ + L+++ +++
Sbjct: 158 IESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNN 202
>gi|399218847|emb|CCF75734.1| unnamed protein product [Babesia microti strain RI]
Length = 237
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 14 GNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGI 73
GNLD +V E +L+++ Q G V +++IPRDK T++ +G+ FVE+++E ADYA K+ + +
Sbjct: 30 GNLDPQVDEEILWELFTQVGIVRNVHIPRDKVTNQHQGYGFVEFDNETEADYAQKVMNAL 89
Query: 74 VTLYNRTLRFALSGQDKNT 92
+Y++ +R + QDK T
Sbjct: 90 -KVYHKPIRCNKASQDKRT 107
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD V E++LYD G V+ I R++ET KGF FV ++S + +D A+
Sbjct: 111 GANLFIGNLDPDVDEKLLYDTFSAFGLVLSTKIVREEETGLGKGFGFVSFDSFDSSDAAL 170
Query: 68 KLFSG 72
+G
Sbjct: 171 ASMNG 175
>gi|55732787|emb|CAH93091.1| hypothetical protein [Pongo abelii]
Length = 264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 9 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 67
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 68 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 95
>gi|301782499|ref|XP_002926663.1| PREDICTED: RNA-binding protein 7-like [Ailuropoda melanoleuca]
gi|281353931|gb|EFB29515.1| hypothetical protein PANDA_016352 [Ailuropoda melanoleuca]
Length = 263
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 11/107 (10%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG VV + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT--------TTPLSSRKSR 108
+GI L+ + ++ SG +Q+ S++ ++P+S+ SR
Sbjct: 71 NGI-KLFGKPIKIQFRSGSSHASQDVSLSYPQHHVGNSSPISTSPSR 116
>gi|386782309|ref|NP_001248000.1| RNA-binding protein 7 [Macaca mulatta]
gi|355567065|gb|EHH23444.1| hypothetical protein EGK_06917 [Macaca mulatta]
gi|355752653|gb|EHH56773.1| hypothetical protein EGM_06248 [Macaca fascicularis]
gi|380808630|gb|AFE76190.1| RNA-binding protein 7 [Macaca mulatta]
gi|383414981|gb|AFH30704.1| RNA-binding protein 7 [Macaca mulatta]
Length = 267
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|296216231|ref|XP_002754472.1| PREDICTED: RNA-binding protein 7 [Callithrix jacchus]
Length = 264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|336367930|gb|EGN96274.1| hypothetical protein SERLA73DRAFT_185935 [Serpula lacrymans var.
lacrymans S7.3]
Length = 319
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD T K KG+ F Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGTGKSKGYGFASYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNRTL 81
+ +G L N+ +
Sbjct: 158 TESMNGQF-LMNKAI 171
>gi|332208260|ref|XP_003253218.1| PREDICTED: RNA-binding protein 7 [Nomascus leucogenys]
Length = 267
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG +Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHASQDVSLS 98
>gi|395535971|ref|XP_003769994.1| PREDICTED: splicing factor 3B subunit 4 [Sarcophilus harrisii]
Length = 462
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 18 EKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVTLY 77
+KVSE +L+++ +QAG VV+ ++P+D+ T + +G+ FVE+ SEE ADYAIK+ + ++ LY
Sbjct: 60 KKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMN-MIKLY 118
Query: 78 NRTLRF-ALSGQDKN 91
+ +R S +KN
Sbjct: 119 GKPIRVNKASAHNKN 133
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 133 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 192
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 193 SDAAIEAMNGQY-LCNRPITVSYAFKKDSKGERHGSAPERLLAAQNPLSQ 241
>gi|355715837|gb|AES05418.1| RNA binding motif protein 7 [Mustela putorius furo]
Length = 262
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG VV + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|365758210|gb|EHN00063.1| Hsh49p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 213
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +++S VY+GN+D ++++ LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNFSTDSDSTVYVGNIDPRITKGQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNK 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP---VN 117
E A+Y I++ + V LY+R ++ SS+ T LSS S+ +P+ V
Sbjct: 61 EDAEYVIQIMNNTVKLYDRLIKV-------RQVTSSVGTASLSSNNSKDIALPIAKLFVK 113
Query: 118 GMEISHHSMRISGTRHYSSEEPPPPGVTHESNG 150
+ S +++ + P + H SNG
Sbjct: 114 NLADSIDIDQLAKIFGKFGKTISKPEIFHLSNG 146
>gi|346322787|gb|EGX92385.1| splicing factor 3b subunit 4 [Cordyceps militaris CM01]
Length = 404
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+Y+GN+DE+ + +Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATIYMGNIDERATPATMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPSDAEYAAA 72
Query: 69 LFSGIVTLYNRTLRFALSGQDK 90
+ +G V LY ++LR + D+
Sbjct: 73 VMNG-VKLYGKSLRVNKASADR 93
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIA 63
++ G +++GNLD E+VLYD + G ++ L I RD KGF F+ + + A
Sbjct: 107 TDIGAELFVGNLDPSCDEKVLYDTFSRFGPLLSLPKIARDDNAVS-KGFGFISFADFDSA 165
Query: 64 DYAIKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
D AI+ SG L + T++FA K ++ + L+ + + + VP
Sbjct: 166 DEAIETLSGTYLLSQQVTVQFAFKRDGKGERHGDKSERELAMQAKKRNVVP 216
>gi|291383856|ref|XP_002708466.1| PREDICTED: RNA binding motif protein 7 [Oryctolagus cuniculus]
Length = 266
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|389749090|gb|EIM90267.1| hypothetical protein STEHIDRAFT_93143 [Stereum hirsutum FP-91666
SS1]
Length = 338
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +E+ A
Sbjct: 7 DRNQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEDDA 66
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDK 90
+YA K+ + I L+ + +R + DK
Sbjct: 67 EYACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD +T + KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPQTGQSKGYGFVAYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
++ +G L N+ T+++A K ++ + L+++ +++
Sbjct: 158 VESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNN 202
>gi|156836482|ref|XP_001642301.1| hypothetical protein Kpol_224p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112796|gb|EDO14443.1| hypothetical protein Kpol_224p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 217
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
SG N +VY+GN+D +++ +LY++ +Q + + P+DK +G+AF+++ +EE
Sbjct: 6 SGFKNPDLSVYVGNIDPSITKELLYELFVQISPIAKINYPKDKVLQTHQGYAFIDFYTEE 65
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEI 121
A+YAI+ F+ V L NR L+ + N SS ++T LS S + + V ++
Sbjct: 66 DANYAIQAFNNNVQLNNRVLKV----RKTNNNISSKSSTNLSQATSVTPYAKIFVKNLDS 121
Query: 122 SHHSMRISGTRHYSSEEPPPPGVTHESNG 150
S +S + H SNG
Sbjct: 122 SVDVAYLSKLFKKFGSLARESEIFHLSNG 150
>gi|62859435|ref|NP_001016096.1| RNA binding motif protein 7 [Xenopus (Silurana) tropicalis]
gi|89269044|emb|CAJ83792.1| RNA binding motif protein 7 [Xenopus (Silurana) tropicalis]
gi|138519984|gb|AAI35724.1| RNA binding motif protein 7 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
G + + +++GNLD + +E +L+++ +QAG + + IP+DK+ KPK FAFV ++ EE
Sbjct: 2 GAAEADRTLFVGNLDPRATEELLFELFLQAGPAISVKIPKDKDG-KPKQFAFVNFKHEES 60
Query: 63 ADYAIKLFSGIVTLYNRTLR 82
Y + L +GI L+ R L+
Sbjct: 61 VPYGMSLLNGI-KLFGRPLK 79
>gi|148225206|ref|NP_001080815.1| RNA binding motif protein 7 [Xenopus laevis]
gi|32766620|gb|AAH54991.1| Rbm7-prov protein [Xenopus laevis]
Length = 251
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD + +E +L+++ +QAG + IP+DK+ KPK FAFV ++ EE Y + L
Sbjct: 10 LFVGNLDPRATEELLFELFLQAGPAFSVKIPKDKDG-KPKQFAFVNFKHEESVPYGMSLL 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQ 93
+GI L+ R L+ K+ Q
Sbjct: 69 NGI-KLFGRPLKIQYRSGSKHIQ 90
>gi|307208549|gb|EFN85888.1| Splicing factor 3B subunit 4 [Harpegnathos saltator]
Length = 429
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 56/88 (63%), Gaps = 12/88 (13%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAG-----------RVVDLYIPRDKETDKPKGFAF 54
N +Y+G LD+KV+E +++++ +Q+G V+++++P+D+ T +G+ F
Sbjct: 10 NQDATIYVGGLDDKVTESLMWELFVQSGPVGMYIYISFMHVLNVHMPKDRVTQMHQGYGF 69
Query: 55 VEYESEEIADYAIKLFSGIVTLYNRTLR 82
VE+ EE ADYAIK+ + ++ LY + +R
Sbjct: 70 VEFMGEEDADYAIKIMN-MIKLYGKPIR 96
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 106 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 165
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 166 SDASIEAMNG 175
>gi|395844114|ref|XP_003794810.1| PREDICTED: RNA-binding protein 7 [Otolemur garnettii]
Length = 264
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|294925596|ref|XP_002778960.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239887806|gb|EER10755.1| spliceosome-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 388
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLD KV E +L+++ IQ G + ++ +PRD+ +G+ FVE+++ + ADY
Sbjct: 19 NPDATIYVGNLDTKVDEELLWELFIQCGPIQNVSLPRDRIIGSHQGYGFVEFKNPDDADY 78
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + + L+++ +R S D+
Sbjct: 79 AVKIMN-LTKLFSKPIRCNKSSSDR 102
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNL V E+ LYD G +V ET + KGF FV Y+ E +D A+
Sbjct: 109 GANLFIGNLGPDVDEKQLYDTFSAFGSIVVFCKIMRSETGESKGFGFVSYDGFEASDAAM 168
Query: 68 KLFSGIVTLYNRTLRFALS 86
+G L NR + + S
Sbjct: 169 AGMNG-QYLCNRQISVSYS 186
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSGN+ +Y+G L E+V E+VL+ I G +VD+ IP D E++K +GFAF+E+E+
Sbjct: 1 MSGNTKR--TIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFETA 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
E A AI + L+ RT+R ++ K + SS
Sbjct: 59 EDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 93
>gi|190344642|gb|EDK36359.2| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLD +V+E +LY++LIQ + L +P+D+ + +G+ FVE+ E A+Y
Sbjct: 14 NVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVSGTHQGYGFVEFRGIEDANY 73
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
+++ G V LY ++L+ L D N++ ++ TT+ ++ S ++ V V
Sbjct: 74 VLEILRG-VRLYGKSLK--LRRADPNSRGAAGTTSNFANNNSVTNAVDV 119
>gi|431908299|gb|ELK11897.1| RNA-binding protein 7 [Pteropus alecto]
Length = 264
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|336380658|gb|EGO21811.1| hypothetical protein SERLADRAFT_397224 [Serpula lacrymans var.
lacrymans S7.9]
Length = 183
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCEFLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G + I RD T K KG+ F Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGVMATTAKIARDPGTGKSKGYGFASYTDFESSDAA 157
Query: 67 IKLFSG 72
+ +G
Sbjct: 158 TESMNG 163
>gi|400598668|gb|EJP66377.1| RNA recognition domain-containing protein [Beauveria bassiana
ARSEF 2860]
Length = 399
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+Y+GN+DE+ + ++Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATIYMGNIDERATPAMMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPADAEYAAS 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +G V L+ ++LR + D+
Sbjct: 73 VVNG-VKLFGKSLRVNKASADRQ 94
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD E++LYD + G ++ L + RD + KGF FV + E AD A
Sbjct: 100 GAELFVGNLDPSADEKLLYDTFSRFGPLLSLPKVARD-DAGVSKGFGFVSFGDFESADAA 158
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
++ SG L N+ T+++A K ++ L+ + + + VP
Sbjct: 159 VEHLSGQYLLSNQVTVQYAFKKDGKGDRHGDQAERELAKQAKKRNVVP 206
>gi|62089092|dbj|BAD92990.1| Hypothetical protein FLJ11153 variant [Homo sapiens]
Length = 155
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 18 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLL 76
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 77 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 104
>gi|426370523|ref|XP_004052212.1| PREDICTED: RNA-binding protein 7 isoform 1 [Gorilla gorilla
gorilla]
Length = 149
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|114640401|ref|XP_001151010.1| PREDICTED: RNA-binding protein 7 isoform 1 [Pan troglodytes]
gi|397467681|ref|XP_003805538.1| PREDICTED: RNA-binding protein 7 [Pan paniscus]
gi|410213740|gb|JAA04089.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410258170|gb|JAA17052.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410291802|gb|JAA24501.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410332447|gb|JAA35170.1| RNA binding motif protein 7 [Pan troglodytes]
Length = 267
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|9994185|ref|NP_057174.1| RNA-binding protein 7 [Homo sapiens]
gi|9978697|sp|Q9Y580.1|RBM7_HUMAN RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|5070698|gb|AAD39257.1|AF156098_1 RNA binding motif protein 7 [Homo sapiens]
gi|21707920|gb|AAH34381.1| RNA binding motif protein 7 [Homo sapiens]
gi|119587651|gb|EAW67247.1| RNA binding motif protein 7, isoform CRA_b [Homo sapiens]
gi|189069167|dbj|BAG35505.1| unnamed protein product [Homo sapiens]
gi|208967360|dbj|BAG73694.1| RNA binding motif protein 7 [synthetic construct]
gi|312150136|gb|ADQ31580.1| RNA binding motif protein 7 [synthetic construct]
Length = 266
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|119587652|gb|EAW67248.1| RNA binding motif protein 7, isoform CRA_c [Homo sapiens]
Length = 267
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|410971965|ref|XP_003992431.1| PREDICTED: RNA-binding protein 7 [Felis catus]
Length = 266
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSVS 98
>gi|340723814|ref|XP_003400283.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus terrestris]
Length = 413
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N G ++ +KV+E +++++ +Q+G VV++++P+D+ T +G+ FVE+ EE ADY
Sbjct: 10 NQGTCLFXXXXXDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
AIK+ + ++ LY + +R
Sbjct: 70 AIKIMN-MIKLYGKPIR 85
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 95 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 154
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 155 SDASIEAMNG 164
>gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens]
Length = 267
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-KLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|322705004|gb|EFY96593.1| splicing factor 3b subunit 4 [Metarhizium anisopliae ARSEF 23]
Length = 383
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+YIGN+DE+ + +Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA
Sbjct: 13 ATIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAAN 72
Query: 69 LFSGIVTLYNRTLRFALSGQDKN 91
+ +GI L+ ++LR + DK
Sbjct: 73 VMNGI-KLFGKSLRVNKASADKQ 94
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIA 63
++ G ++IGNLD V E++LYD + G ++ L + RD ++ KGF FV + E +
Sbjct: 97 ADIGAELFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARD-DSGMSKGFGFVSFGDFESS 155
Query: 64 DYAIKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
D A+ G L ++++A K ++ L+ + + + VP
Sbjct: 156 DAAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELAKQAKKRNIVP 206
>gi|311263944|ref|XP_003129925.1| PREDICTED: RNA-binding protein 7-like [Sus scrofa]
Length = 265
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQEVSLS 98
>gi|156367274|ref|XP_001627343.1| predicted protein [Nematostella vectensis]
gi|156214250|gb|EDO35243.1| predicted protein [Nematostella vectensis]
Length = 83
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C+V++GNLD +V+E +L+++ +QAG + ++ IP DK T + + F FVE+ S YA +
Sbjct: 3 CSVFVGNLDSRVTEEILWELFLQAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASE 62
Query: 69 LFSGIVTLYNRTL 81
L GI LY+R +
Sbjct: 63 LLDGI-RLYDRAI 74
>gi|406602156|emb|CCH46282.1| Spliceosome-associated protein 49 [Wickerhamomyces ciferrii]
Length = 210
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+ + N C VY+GNLDEKV + +LY++ IQ + ++++P+D+ +G+ FVE+++
Sbjct: 6 IESDRNQDCTVYVGNLDEKVHDGLLYELFIQIAPIKNIHLPKDRILRTHQGYGFVEFKNV 65
Query: 61 EIADYAIKLFSGIVTLYNRTLR 82
+ +YA K+ +GI LY + LR
Sbjct: 66 KDTEYAEKIMNGI-KLYGKNLR 86
>gi|47682782|gb|AAH70262.1| RNA binding motif protein 7 [Homo sapiens]
Length = 266
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI LY R ++ SG Q+ S++
Sbjct: 71 NGI-RLYGRPIKIQFRSGSSHAPQDVSLS 98
>gi|351702313|gb|EHB05232.1| RNA-binding protein 7 [Heterocephalus glaber]
Length = 265
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E++ YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFK-HEVSVYAMNLL 69
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 70 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 97
>gi|146422279|ref|XP_001487080.1| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
+ N +Y+GNLD +V+E +LY++LIQ + L +P+D+ +G+ FVE+ E
Sbjct: 11 ADRNVKATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVLGTHQGYGFVEFRGIED 70
Query: 63 ADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
A+Y +++ G V LY ++L+ L D N++ ++ TT+ ++ S ++ V V
Sbjct: 71 ANYVLEILRG-VRLYGKSLK--LRRADPNSRGAAGTTSNFANNNSVTNAVDV 119
>gi|170093944|ref|XP_001878193.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646647|gb|EDR10892.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 302
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDE+ ++ +++++++QAG VV++++P+D+ + +G+ F E +EE A+Y
Sbjct: 9 NQEATVYLGNLDERCTDALVWELMLQAGPVVNVHLPKDRISMAHQGYGFCELLTEEDAEY 68
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + DK
Sbjct: 69 ACKIMNQI-KLWGKPIRVNKASSDK 92
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAG-RVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLDE V ER+LYD G I RD + KG+ FV Y E +D A
Sbjct: 98 GANLFIGNLDENVDERLLYDTFSAFGIMATTAKIARDTGSGTSKGYGFVSYTDFESSDAA 157
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
++ +G L N+ T+++A K ++ + L+++ +++
Sbjct: 158 VESMNGQF-LMNKAITVQYAFKKDGKGERHGTPAERLLAAQARKNN 202
>gi|401839791|gb|EJT42839.1| HSH49-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 213
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +++S VY+GN+D ++++ LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNFSTDSDSTVYVGNIDPRITKDQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNK 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP---VN 117
E A+Y I++ + V LY+R ++ +S+ T LSS S+ +P+ V
Sbjct: 61 EDAEYVIQIMNNTVKLYDRLIKV-------RQVTNSVGTANLSSNNSKDIALPIAKLFVK 113
Query: 118 GMEISHHSMRISGTRHYSSEEPPPPGVTHESNG 150
+ S +++ + P + H SNG
Sbjct: 114 NLADSIDIDQLAKIFGKFGKTISKPEIFHLSNG 146
>gi|149716524|ref|XP_001502226.1| PREDICTED: RNA-binding protein 7-like [Equus caballus]
Length = 266
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+D++ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDRDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q+ S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVSLS 98
>gi|340725392|ref|XP_003401054.1| PREDICTED: hypothetical protein LOC100650788 [Bombus terrestris]
Length = 200
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL +KV+E +LY++ +QAG V ++ IP+D+ K + F FV Y+ YA++LF
Sbjct: 8 LWCGNLSDKVTEEILYELFLQAGPVENVTIPKDR-NGKQRRFGFVTYKHVNSVSYALELF 66
Query: 71 SGIVTLYNRTLRFA 84
SG +L+NRTL +
Sbjct: 67 SG-TSLFNRTLNIS 79
>gi|307189573|gb|EFN73937.1| Peptidyl-prolyl cis-trans isomerase E [Camponotus floridanus]
Length = 293
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSGN+ +Y+G L E+V E+VL+ I G +VD+ IP D E++K +GFAF+E+E
Sbjct: 1 MSGNTKR--TIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEMA 58
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
E A AI + L+ RT+R ++ K + SS
Sbjct: 59 EDAAAAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 93
>gi|307175661|gb|EFN65554.1| RNA-binding protein 7 [Camponotus floridanus]
Length = 232
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y GNL +K++E +LY++ +Q G + + IP+D++ K + FAF+ Y+ +YA++LF
Sbjct: 8 LYCGNLSDKITEDILYELFLQGGPIQKISIPKDRDG-KQRPFAFITYKHIHSVEYALRLF 66
Query: 71 SGIVTLYNRTLRFAL 85
G LYNRTL L
Sbjct: 67 DG-TELYNRTLNMQL 80
>gi|327288080|ref|XP_003228756.1| PREDICTED: RNA-binding protein 7-like [Anolis carolinensis]
Length = 261
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD V+E +L+++ +Q G V+++ IP+D+E K K FAFV ++ EE Y + L
Sbjct: 12 LFVGNLDPGVTEELLFELFLQGGPVLNVKIPKDRE-GKAKSFAFVNFKHEESVPYGMSLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQN 94
+GI L+ R L+ SG +Q+
Sbjct: 71 NGI-KLFGRPLKIQFRSGSSHASQD 94
>gi|358057302|dbj|GAA96651.1| hypothetical protein E5Q_03322 [Mixia osmundae IAM 14324]
Length = 274
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y+GNLDE+V++ +++++++Q G + ++++P+D+ + +G+ F E+++EE A+Y
Sbjct: 11 NQEATIYMGNLDERVTDALVWELMLQCGPIGNVHLPKDRVSMAHQGYGFCEFQNEEDAEY 70
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + I L+ + +R + D+
Sbjct: 71 AVKIMNQI-KLFGKPIRVNKASSDR 94
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V ER+LYD G + + YIPR+ T +G F+ +++ E +D A
Sbjct: 100 GANLFIGNLDPAVDERLLYDAFSNFGTMTNTAYIPRETGTGASRGHGFISFDTFEASDAA 159
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
I+ + L N+ T+++A K ++ S L+++ ++
Sbjct: 160 IEAMNN-QYLMNKPITVQYAFKKDTKGERHGSAAERLLAAQAQKN 203
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N+ +Y+G L E+V E+VL+ I G +VD+ IP D E++K +GFAF+E+ES E A
Sbjct: 41 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 100
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
AI + L+ RT+R ++ K + SS
Sbjct: 101 AAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 131
>gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster]
Length = 366
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 20/96 (20%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRV-------------------VDLYIPRDKET 46
N +Y G LD+KVSE +L+++ +QAG V V++++P+D+ T
Sbjct: 10 NQDATIYAGGLDDKVSETLLWELFVQAGPVGKSGHTCIVPSSSLIVMLAVNVHMPKDRVT 69
Query: 47 DKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLR 82
+G+ FVE+ SEE ADY IK+ + ++ LY + +R
Sbjct: 70 QMHQGYGFVEFLSEEDADYGIKIMN-MIKLYGKPIR 104
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET K K FAF+ + S E
Sbjct: 114 NLDVGANIFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEA 173
Query: 63 ADYAIKLFSG 72
+D A+ +G
Sbjct: 174 SDAAMDAMNG 183
>gi|77735925|ref|NP_001029659.1| RNA-binding protein 7 [Bos taurus]
gi|91207337|sp|Q3MHY8.1|RBM7_BOVIN RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|75775082|gb|AAI04519.1| RNA binding motif protein 7 [Bos taurus]
gi|296480264|tpg|DAA22379.1| TPA: RNA-binding protein 7 [Bos taurus]
gi|440909197|gb|ELR59131.1| RNA-binding protein 7 [Bos grunniens mutus]
Length = 262
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ +G +Q S++
Sbjct: 71 NGI-KLFGRPIKIQFRAGSSHASQEVSLS 98
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N+ +Y+G L E+V E+VL+ I G +VD+ IP D E++K +GFAF+E+ES E A
Sbjct: 71 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 130
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
AI + L+ RT+R ++ K + SS
Sbjct: 131 AAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 161
>gi|345478874|ref|XP_001607670.2| PREDICTED: hypothetical protein LOC100123901 [Nasonia
vitripennis]
Length = 214
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL E+++E +LY++ +QAG + + IP++++ KPK F FV Y++ YA++LF
Sbjct: 9 IWCGNLSEQITEDILYELFLQAGPIQKVSIPKERDG-KPKSFGFVTYKNLCSVPYALELF 67
Query: 71 SGIVTLYNRTL 81
G V L+NR+L
Sbjct: 68 DGTV-LFNRSL 77
>gi|357625711|gb|EHJ76061.1| hypothetical protein KGM_12160 [Danaus plexippus]
Length = 205
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V+ GNL E+V+E +LY++ +QAG V + IP+DK+ + K FAF+ Y E YAI LF
Sbjct: 9 VWCGNLSEQVTEELLYELFVQAGPVEKVIIPKDKD-GRQKNFAFITYCHEVSVPYAINLF 67
Query: 71 SGIVTLYNRTL 81
G L++RTL
Sbjct: 68 RG-TALFHRTL 77
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+G LD+KV E +++++ +QAG VV +++P+D+ + + + FVE+ E+ A+Y
Sbjct: 10 NQDATVYVGGLDDKVDEELVWELFLQAGPVVSVHMPKDRVSGAHQSYGFVEFLGEDDAEY 69
Query: 66 AIKLFSGIVTLYNRTLR 82
A+K+ + ++ +Y + +R
Sbjct: 70 ALKILN-MINVYGKPIR 85
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G N+YIGNL +V E++L+D G ++ + RD ET KGFAF+ Y + E +D A
Sbjct: 99 GANLYIGNLAPEVDEKLLFDTFSAFGVILQHPKVMRDLETGHSKGFAFINYATFEASDAA 158
Query: 67 IK 68
IK
Sbjct: 159 IK 160
>gi|219130389|ref|XP_002185349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403264|gb|EEC43218.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 328
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLD+ SE +L ++ Q GRV +Y+P+DK + + G+ FVEY ADY
Sbjct: 11 NQDATVYVGNLDQACSEELLTELFSQVGRVASVYMPKDKLSGQHNGYGFVEYLDAVDADY 70
Query: 66 AIKLFSGIVTLYNRTLRFALS 86
A+ + ++ L+ R +R + S
Sbjct: 71 AMTILH-MMKLFGRPVRVSKS 90
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 8 GCNVYIGNLDE-KVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADY 65
G N++IGN+D V+E++LY+ G +V I RD+ T + KGFAF+ Y+S + AD
Sbjct: 104 GANLFIGNVDPIDVNEQLLYETFTAFGTLVRTPNIARDEATQQSKGFAFLSYDSFQAADM 163
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
AI+L +G L NR ++ + K N ++T SR R
Sbjct: 164 AIELMNGQY-LGNRQIQVNYAW--KKDANGNITNERHGSRAER 203
>gi|349581469|dbj|GAA26627.1| K7_Hsh49p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 213
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 68/114 (59%), Gaps = 7/114 (6%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +++SG VY+GN+D ++++ LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNYSADSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQ 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
A YAIK+ + V LY+R ++ + NS+ TT L S S+ +P+
Sbjct: 61 GDAQYAIKIMNNTVRLYDRLIKV------RQVTNSTGTTN-LPSNISKDMILPI 107
>gi|345799921|ref|XP_853905.2| PREDICTED: RNA-binding protein 7 [Canis lupus familiaris]
Length = 262
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG VV + IP+DK+ KPK FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDG-KPKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSM 97
+GI L+ R ++ SG +Q+ ++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDVNL 97
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans
isomerase E-like [Apis florea]
Length = 293
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N+ +Y+G L E+V E+VL+ I G +VD+ IP D E++K +GFAF+E+ES E A
Sbjct: 3 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 62
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
AI + L+ RT+R ++ K + SS
Sbjct: 63 AAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 93
>gi|6324895|ref|NP_014964.1| Hsh49p [Saccharomyces cerevisiae S288c]
gi|2500588|sp|Q99181.1|HSH49_YEAST RecName: Full=Protein HSH49
gi|940850|emb|CAA62174.1| orf 06142 [Saccharomyces cerevisiae]
gi|1420700|emb|CAA99639.1| HSH49 [Saccharomyces cerevisiae]
gi|45270764|gb|AAS56763.1| YOR319W [Saccharomyces cerevisiae]
gi|151945399|gb|EDN63642.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407618|gb|EDV10885.1| protein HSH49 [Saccharomyces cerevisiae RM11-1a]
gi|207340889|gb|EDZ69099.1| YOR319Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272549|gb|EEU07528.1| Hsh49p [Saccharomyces cerevisiae JAY291]
gi|259149795|emb|CAY86599.1| Hsh49p [Saccharomyces cerevisiae EC1118]
gi|285815190|tpg|DAA11083.1| TPA: Hsh49p [Saccharomyces cerevisiae S288c]
gi|323303013|gb|EGA56817.1| Hsh49p [Saccharomyces cerevisiae FostersB]
gi|323307266|gb|EGA60547.1| Hsh49p [Saccharomyces cerevisiae FostersO]
gi|323331441|gb|EGA72857.1| Hsh49p [Saccharomyces cerevisiae AWRI796]
gi|323335366|gb|EGA76653.1| Hsh49p [Saccharomyces cerevisiae Vin13]
gi|323346364|gb|EGA80653.1| Hsh49p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762976|gb|EHN04508.1| Hsh49p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296647|gb|EIW07749.1| Hsh49p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 213
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 68/114 (59%), Gaps = 7/114 (6%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +++SG VY+GN+D ++++ LY++ IQ V+ + P+DK +G+AF+E+ ++
Sbjct: 1 MNYSADSGNTVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQ 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
A YAIK+ + V LY+R ++ + NS+ TT L S S+ +P+
Sbjct: 61 GDAQYAIKIMNNTVRLYDRLIKV------RQVTNST-GTTNLPSNISKDMILPI 107
>gi|312377547|gb|EFR24356.1| hypothetical protein AND_11102 [Anopheles darlingi]
Length = 293
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL EKV++ +LY++ +QAG V ++ IPRD + + + +AF+ Y +YAIKLF
Sbjct: 8 LWCGNLSEKVTDELLYELFLQAGPVENVKIPRDSDR-RQRSYAFITYVHACSVEYAIKLF 66
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMT------TTPLSSRKSRSDPVPVPVNGMEISHH 124
G +LY R L L + +N N + + + S+R SD G E
Sbjct: 67 EG-TSLYQRKL--TLHKKQRNGPNPAASPQLNFNASSNSNRSQLSDSYGNSSTGTEFDVS 123
Query: 125 SMRISGTRHYSSEEPPPPGVTHESNGYETHLNVTNYDYSRRVFGATL 171
SM + P G THE + +N R+ GA L
Sbjct: 124 SMMMFAQN--------PLGPTHEQ-AFAMAMNGMLAQMGDRMLGACL 161
>gi|149041583|gb|EDL95424.1| RNA binding motif protein 7 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 265
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q++SM+
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHLSQDASMS 98
>gi|50290493|ref|XP_447678.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526988|emb|CAG60615.1| unnamed protein product [Candida glabrata]
Length = 211
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S+ +Y+GN+D KV++ +LY++ Q G+V + P+DK + + +GFAF+E+ S AD
Sbjct: 2 SDPEATIYVGNIDTKVTKELLYELFTQVGQVKKVKYPKDKISQEYQGFAFIEFFSTADAD 61
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQ 88
Y + + + V LY + L+ S Q
Sbjct: 62 YVLNVMNNNVKLYQKVLKIRRSNQ 85
>gi|328782599|ref|XP_003250169.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Apis mellifera]
Length = 331
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N+ +Y+G L E+V E+VL+ I G +VD+ IP D E++K +GFAF+E+ES E A
Sbjct: 41 TNTKRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAA 100
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
AI + L+ RT+R ++ K + SS
Sbjct: 101 AAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 131
>gi|342320413|gb|EGU12353.1| Splicing factor 3b subunit 4 [Rhodotorula glutinis ATCC 204091]
Length = 317
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N Y+GNLDE+V++ +++++++QAG V ++++P+D+ + +G+ F E+ +EE A+Y
Sbjct: 10 NQDATCYLGNLDERVTDALVWELMLQAGPVANVHLPKDRISMTHQGYGFCEFLTEEDAEY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + D+
Sbjct: 70 ACKIMNQI-KLFGKPIRVNKASSDR 93
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD + ER+LYD G +V I RD T KGF FV Y+S E AD A
Sbjct: 99 GANLFIGNLDPNIDERMLYDTFTAFGTLVQPAKISRDVGTGASKGFGFVSYDSFEAADAA 158
Query: 67 IKLFSG 72
I+ +G
Sbjct: 159 IESMNG 164
>gi|451854358|gb|EMD67651.1| hypothetical protein COCSADRAFT_168831 [Cochliobolus sativus
ND90Pr]
Length = 331
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNL E+V+ R+L+++++ GRV ++ +P D+ + + F FVE+ +E ADY
Sbjct: 12 NKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQSFGFVEFHTEAEADY 71
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKN 91
A K+ + V LY +R + DK
Sbjct: 72 ASKILNN-VALYGSRIRVNKASADKQ 96
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N G +++GNLD V E+ LYD + G +V+ + RD+ T KG+ F+ Y E
Sbjct: 98 NVEIGAELFVGNLDPGVDEKTLYDTFSRFGPLVNAPKVARDEVTTASKGYGFISYGDFES 157
Query: 63 ADYAI 67
+D AI
Sbjct: 158 SDAAI 162
>gi|363728611|ref|XP_416676.3| PREDICTED: putative RNA-binding protein 11 [Gallus gallus]
Length = 256
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 1 MSGNSNSGC---NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 57
MSG+ +G +++GNL+ +V E +LY++ +QAG + + I +DKE KPK F FV +
Sbjct: 1 MSGSGRAGEADRTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKE-GKPKSFGFVCF 59
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLR 82
+ +E YAI L +GI LY R ++
Sbjct: 60 KHKESVPYAIALLNGI-RLYGRPIK 83
>gi|451999433|gb|EMD91895.1| hypothetical protein COCHEDRAFT_1154917 [Cochliobolus
heterostrophus C5]
Length = 331
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNL E+V+ R+L+++++ GRV ++ +P D+ + + F FVE+ +E ADY
Sbjct: 12 NKEATVYVGNLHERVTPRILHELMLNTGRVRNVNMPVDRVNGQHQSFGFVEFHTEAEADY 71
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKN 91
A K+ + V LY +R + DK
Sbjct: 72 ASKILNN-VALYGSRIRVNKASADKQ 96
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N G +++GNLD V E+ LYD + G +V+ + RD+ T KG+ F+ Y E
Sbjct: 98 NVEIGAELFVGNLDPGVDEKTLYDTFSRFGPLVNAPKVARDEVTTASKGYGFISYGDFES 157
Query: 63 ADYAI 67
+D AI
Sbjct: 158 SDAAI 162
>gi|198416256|ref|XP_002122144.1| PREDICTED: similar to GF14865 [Ciona intestinalis]
Length = 232
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG ++ C +++GNL +KV+E +LY++ +QAG + ++IP D + + + + FV ++ E
Sbjct: 4 MSG-ADDACTLFVGNLHDKVTEAILYELFLQAGPIKKVHIPVDHKNGRNRPYGFVTFKHE 62
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDP 111
Y+IKL GI + ++L + S T SR S P
Sbjct: 63 VSVPYSIKLMDGI-----QVFEYSLKVDKRKASGGSGNDTNGDSRPGHSSP 108
>gi|383862957|ref|XP_003706949.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like, partial [Megachile rotundata]
Length = 326
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
++N+ +Y+G L E+V E++L+ I G +VD+ IP D E++K +GFAF+E+ES E A
Sbjct: 35 STNTKRTIYVGGLAEEVDEKILHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDA 94
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
AI + L+ RT+R ++ K + SS
Sbjct: 95 ATAIDNMND-SELFGRTIRVNIAKPQKIKEGSS 126
>gi|322696259|gb|EFY88054.1| splicing factor 3b subunit 4 [Metarhizium acridum CQMa 102]
Length = 578
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGN+DE+ + +Y+I++Q G + ++++PRD+ T +GF FVE+ + A+YA +
Sbjct: 35 IYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAANVM 94
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+GI L+ ++LR + DK
Sbjct: 95 NGI-KLFGKSLRVNKASADK 113
Score = 43.1 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
++ G ++IGNLD V E++LYD + G ++ L ++ KGF FV + E +D
Sbjct: 117 ADIGAELFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARDDSGMSKGFGFVSFGDFESSD 176
Query: 65 YAIKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
A+ G L ++++A K ++ L+ + + + VP
Sbjct: 177 AAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELAKQAKKRNIVP 226
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
++ G ++IGNLD V E++LYD + G ++ L ++ KGF FV + E +D
Sbjct: 279 ADIGAVLFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARDDSGMSKGFGFVSFGDFESSD 338
Query: 65 YAIKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
A+ G L ++++A K ++ L+ + + + VP
Sbjct: 339 AAVANLDGQYMLSKEVSVQYAFKKDGKGERHGDEAERELAKQAKKRNIVP 388
>gi|388579997|gb|EIM20315.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 260
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIGN+ E VS+ +++++++QAG V +++P+D+ + +GF F E+ ++E A+Y
Sbjct: 12 NQEATIYIGNIPEAVSDAIIWELMLQAGPVASVHLPKDRVSMSHQGFGFCEFVNDEDAEY 71
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I LY + +R + D+
Sbjct: 72 ACKIMNQI-KLYGKPIRVNKASTDR 95
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLY-IPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V ER+L+D G ++D+ I RD +T KG+ F++Y + +D A
Sbjct: 101 GANLFIGNLDPGVDERLLFDTFSTFGLMMDVAKIARD-DTGYSKGYGFIQYNDFDSSDQA 159
Query: 67 IKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
I +G L N+ T+ +A K ++ + L++ R++ +P+P
Sbjct: 160 ISAMNG-QYLMNKPLTVDYAFKKDGKGERHGTEAERMLAAEAKRNNALPMP 209
>gi|194758661|ref|XP_001961580.1| GF14865 [Drosophila ananassae]
gi|190615277|gb|EDV30801.1| GF14865 [Drosophila ananassae]
Length = 241
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP DK + + F FV Y+ +A++L+
Sbjct: 67 LFCGNLDERVTEEILYEVFLQAGPIEQVRIPVDKMGGRHRNFGFVTYQHLCAVPFALELY 126
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
G+ L+ + + G DK Q S
Sbjct: 127 QGL-ELFEKKVTIRPQGADKPRQQQS 151
>gi|345326044|ref|XP_003430992.1| PREDICTED: putative RNA-binding protein 11-like [Ornithorhynchus
anatinus]
Length = 240
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG ++ + I +DKE KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLESRVREEILYELFLQAGPLIKVTICKDKE-GKPKSFGFVCFKHTESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V E+VL+ I G +VD+ IP D ET+K +GFAFVE+ES E A AI
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETEKHRGFAFVEFESAEDAAAAIDNM 68
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 69 ND-SELFGRTIRVNIA 83
>gi|322779383|gb|EFZ09622.1| hypothetical protein SINV_09004 [Solenopsis invicta]
Length = 234
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y GNL EKV+E +LY++ +Q G V + IP+D+E K + + F+ Y+ + +YA+ LF
Sbjct: 8 LYCGNLSEKVTEDILYELFLQGGPVQKITIPKDREG-KQRTYGFITYKHMKSVEYALLLF 66
Query: 71 SGIVTLYNRTL 81
G + LYNRTL
Sbjct: 67 DGTM-LYNRTL 76
>gi|326913169|ref|XP_003202913.1| PREDICTED: putative RNA-binding protein 11-like [Meleagris
gallopavo]
Length = 221
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 1 MSGNSNSGC---NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 57
MSG +G +++GNL+ +V E +LY++ +QAG + + I +DKE KPK F FV +
Sbjct: 1 MSGPGRAGEADRTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKE-GKPKSFGFVCF 59
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLR 82
+ +E YAI L +GI LY R ++
Sbjct: 60 KHKESVPYAIALLNGI-RLYGRPIK 83
>gi|27753952|ref|NP_659197.2| RNA-binding protein 7 [Mus musculus]
gi|55976586|sp|Q9CQT2.1|RBM7_MOUSE RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|18141295|gb|AAL60585.1|AF458961_1 RNA binding motif protein 7 [Mus musculus]
gi|12837596|dbj|BAB23878.1| unnamed protein product [Mus musculus]
gi|12839998|dbj|BAB24729.1| unnamed protein product [Mus musculus]
gi|12842963|dbj|BAB25804.1| unnamed protein product [Mus musculus]
gi|74181616|dbj|BAE30073.1| unnamed protein product [Mus musculus]
gi|109733079|gb|AAI16932.1| RNA binding motif protein 7 [Mus musculus]
gi|111600453|gb|AAI19039.1| RNA binding motif protein 7 [Mus musculus]
gi|148693760|gb|EDL25707.1| mCG9666, isoform CRA_d [Mus musculus]
Length = 265
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|354494485|ref|XP_003509367.1| PREDICTED: RNA-binding protein 7-like [Cricetulus griseus]
gi|344237164|gb|EGV93267.1| RNA-binding protein 7 [Cricetulus griseus]
Length = 265
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|32493337|gb|AAH54774.1| RNA binding motif protein 7 [Mus musculus]
Length = 265
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDG-KLKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|390360868|ref|XP_793337.3| PREDICTED: RNA-binding protein 7-like [Strongylocentrotus
purpuratus]
Length = 353
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N + +++GNLD +V++ +L+++ +QAG + + I +DKE ++ + FAFVE++ +
Sbjct: 2 NDQADRTLWVGNLDPRVTDEILFELFLQAGPLQHVNIAKDKEGNQ-RNFAFVEFKHDVSV 60
Query: 64 DYAIKLFSGIVTLYNRTLRFAL 85
Y+++L G+ L+NR LR
Sbjct: 61 PYSMQLMGGLA-LFNRGLRLQF 81
>gi|148693757|gb|EDL25704.1| mCG9666, isoform CRA_a [Mus musculus]
Length = 116
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL+ KV+E +L+++ QAG V+ + IP+DK+ K K FAFV ++ E YA+ L
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKD-GKLKQFAFVNFKHEVSVPYAMNLL 70
Query: 71 SGIVTLYNRTLRFAL-SGQDKNTQNSSMT 98
+GI L+ R ++ SG +Q++S++
Sbjct: 71 NGI-KLFGRPIKIQFRSGSSHASQDASVS 98
>gi|367038731|ref|XP_003649746.1| hypothetical protein THITE_2108627 [Thielavia terrestris NRRL
8126]
gi|346997007|gb|AEO63410.1| hypothetical protein THITE_2108627 [Thielavia terrestris NRRL
8126]
Length = 399
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GN+DE+ ++ +L +++ Q G V +++P+D+ + +G+ FVE+++ A+Y
Sbjct: 8 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKN 91
A K+ +GI ++ + +R + DK
Sbjct: 68 AAKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD Q G+++ I RD E KG+ FV ++S E +D A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-ENHISKGYGFVSFDSFEASDAA 156
Query: 67 IKLFSG 72
+ +G
Sbjct: 157 LSTMNG 162
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ SE L +IL Q G ++ + D+ET KPKG+AF EY E+A AI+
Sbjct: 7 VFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNL 66
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+G L RTLR L+ DK
Sbjct: 67 NG-TELNGRTLRVDLADSDK 85
>gi|429964943|gb|ELA46940.1| hypothetical protein VCUG_01559 [Vavraia culicis 'floridensis']
Length = 202
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
GC+V++GN+D V E L + L GRVV + D +T K KG+ F EYE++EIA A
Sbjct: 3 KGCSVFVGNIDFDVPEEKLIEQLGTIGRVVSFRMVYDHKTKKSKGYGFCEYENKEIAQLA 62
Query: 67 IKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
+K + ++ NR ++ + D +NSS + + + + + V
Sbjct: 63 VKTLN--ISFNNRQVKINYAENDMKRKNSSWKIEDVLKKMDKVNLLDV 108
>gi|281204013|gb|EFA78209.1| RNA-binding region RNP-1 domain-containing protein
[Polysphondylium pallidum PN500]
Length = 252
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N + + +LD +V+E +L++++IQA VV +++P+DK T + G A++E++SE ADY
Sbjct: 10 NLDACIQVRDLDPQVTESLLWELMIQAAPVVKVFMPKDKLTQQHSGRAYIEFQSEADADY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
+++ + V L+ R L+ +DK
Sbjct: 70 VMRIMN-YVKLFGRPLKLKKGNKDK 93
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++L+D Q G ++ I RD + KGF FV Y++ +D A
Sbjct: 97 GANLFIGNLDGEVDEKLLHDTFCQFGTIIQPPKIMRDTSSGVSKGFGFVSYDNFTSSDMA 156
Query: 67 IKLFSG 72
I+ +G
Sbjct: 157 IEAMNG 162
>gi|344233005|gb|EGV64878.1| hypothetical protein CANTEDRAFT_104351 [Candida tenuis ATCC 10573]
Length = 241
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N ++YIGNLD KV+E +LY++ +Q V L++P+D+ +GF FVE+++ + +Y
Sbjct: 14 NVEASLYIGNLDPKVTETILYELFVQFAPVRSLHLPKDRVLRAHQGFGFVEFKNPKDTEY 73
Query: 66 AIKLFSGIVTLYNRTLRFAL--SGQDKNTQNSSMTTT 100
+ G V LY + LR +G+ +TQ S +T
Sbjct: 74 VVSALKG-VRLYGKLLRLRQLEAGKPSSTQPSKSVST 109
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V E+VL+ I G VVD+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAVAAIDNM 68
Query: 71 SGIVTLYNRTLR 82
+ L+ RT+R
Sbjct: 69 ND-SELFGRTIR 79
>gi|307105970|gb|EFN54217.1| hypothetical protein CHLNCDRAFT_24873 [Chlorella variabilis]
Length = 104
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 10 NVYIGNLDEKVSERVLYDILIQ-AGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+++GNLD +V+ R+LY++ IQ AG V+ + +P + +G+ FVE+ES E A +A++
Sbjct: 8 TLWLGNLDPRVTRRLLYELGIQQAGPVISISLPVAVDGSN-RGYGFVEFESVESAAFAVR 66
Query: 69 LFSGIVTLYNRTLRFALSGQDK---NTQNSSMTTTPL 102
LF G+ TL+ R +R G+ Q+ M P+
Sbjct: 67 LFRGL-TLFGRPVRTDFGGKKAGGPQQQHGGMAAAPV 102
>gi|221115228|ref|XP_002154334.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Hydra
magnipapillata]
Length = 297
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG L E+V E++L+ I G ++D+ IP D ET K +GFAF+E+E E A AI
Sbjct: 7 IYIGGLAEEVEEKILHAAFIPFGDIIDVNIPIDYETSKHRGFAFMEFELAEDAAAAIDNM 66
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ LY RT+R L+ KN +++S
Sbjct: 67 NE-SELYGRTIRVNLAKPMKNPESAS 91
>gi|47229364|emb|CAF99352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 35/111 (31%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPK--------------- 50
N VY+G LDEKVSE +L+++ +QAG VV+ ++P+D+ T + +
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGEQLFHTDNTEDACV 69
Query: 51 -------------------GFAFVEYESEEIADYAIKLFSGIVTLYNRTLR 82
G+ FVE+ SEE ADYAIK+ + ++ LY + +R
Sbjct: 70 RFQKRLLYVNETNVHILFSGYGFVEFLSEEDADYAIKIMN-MIKLYGKPIR 119
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 129 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 188
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRS 109
+D AI+ +G L NR T+ +A K ++ S L+++ S
Sbjct: 189 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLS 236
>gi|351701345|gb|EHB04264.1| Putative RNA-binding protein 11 [Heterocephalus glaber]
Length = 245
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
+GI LY R + RF S + S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|365986549|ref|XP_003670106.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
gi|343768876|emb|CCD24863.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
Length = 258
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S SN +VY+GN+D V++ LY++ +Q + + P+DK +G+AF+E+ + E
Sbjct: 42 SQMSNPELSVYVGNIDPNVTKAQLYELFVQVSPISKIAYPKDKLLQTHQGYAFIEFYTPE 101
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTT 100
+Y +K+ + V+LY+R L+ S Q+ + N+ TT
Sbjct: 102 DTNYVVKVMNNTVSLYDRFLKVRKSVQNLPSSNNKTYTT 140
>gi|189242406|ref|XP_001810193.1| PREDICTED: similar to putative peptidyl-prolyl cis-trans
isomerase E [Tribolium castaneum]
gi|270016278|gb|EFA12724.1| hypothetical protein TcasGA2_TC002359 [Tribolium castaneum]
Length = 302
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL I G +VD+ IP D ET+K +GFAF+E+ES E A AI
Sbjct: 9 IYVGGLAEEVDDKVLNAAFIPFGDIVDIQIPLDYETEKHRGFAFIEFESAEDAAAAIDNM 68
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 69 ND-SELFGRTIRVNLA 83
>gi|41351458|gb|AAH65641.1| Zgc:77304 protein [Danio rerio]
Length = 252
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD +V+E V++++ +QAG ++ + IP+D E K K FAFV ++ E YA+ L
Sbjct: 11 LFVGNLDPQVTEEVIFELFLQAGPLIKVKIPKDNEG-KSKLFAFVNFKHEVSVPYALNLL 69
Query: 71 SGIVTLYNRTLRFAL----------SGQDKNTQNSSMTTTP 101
+GI L+ R L N+QN S TP
Sbjct: 70 NGI-RLHGRQLNIKFKTGSSHINQEGKSPANSQNPSPANTP 109
>gi|367009880|ref|XP_003679441.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
gi|359747099|emb|CCE90230.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
Length = 210
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N VY+GN+D KV++ LY++ +Q + ++ P+DK +GFAFVE+ + E
Sbjct: 6 NNPETTVYVGNIDPKVTKENLYELFVQVSPIANIRYPKDKVLQLHQGFAFVEFYTPEDCQ 65
Query: 65 YAIKLFSGIVTLYNRTLR 82
Y ++L + V LY+R L+
Sbjct: 66 YVVQLLNNTVQLYDRFLK 83
>gi|336257859|ref|XP_003343751.1| NAM8/MRE2 protein [Sordaria macrospora k-hell]
gi|380091622|emb|CCC10754.1| putative NAM8/MRE2 protein [Sordaria macrospora k-hell]
Length = 390
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GN+DE+ ++ +L +++ Q G V +++P+D+ + +G+ FVE+++ A+
Sbjct: 7 QNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAE 66
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA K+ +GI ++ + +R + DK
Sbjct: 67 YAAKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD Q G+++ I RD + + KG+ FV + S E +D A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFGSFEASDAA 156
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
+G L + T+ +A K ++ L++ + + VP
Sbjct: 157 RATMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|426217269|ref|XP_004002876.1| PREDICTED: splicing regulator RBM11 [Ovis aries]
Length = 246
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|171693953|ref|XP_001911901.1| hypothetical protein [Podospora anserina S mat+]
gi|170946925|emb|CAP73729.1| unnamed protein product [Podospora anserina S mat+]
Length = 403
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GN+DE+ ++ +L +++ Q G V +++P D+ T +G+ F+E+++ E A+
Sbjct: 18 QNKDATVYVGNIDERFTQELLTELMTQVGPVRQVHMPLDRVTRNHQGYGFIEFDTPESAE 77
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA K +GI ++ + LR + DK
Sbjct: 78 YAAKCLNGI-RVHGKPLRVNKASADKQ 103
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD G+++ I RD + + KG+ FV ++S E +D A
Sbjct: 109 GAELFINNLDPQVDEKILYDTFSTFGQILRQPNIVRD-DNNISKGYGFVSFDSFEASDAA 167
Query: 67 IKLFSG 72
+ +G
Sbjct: 168 LANMNG 173
>gi|431838638|gb|ELK00569.1| Putative RNA-binding protein 11 [Pteropus alecto]
Length = 238
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
+GI LY R + RF S + S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|410970206|ref|XP_003991579.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulator RBM11 [Felis
catus]
Length = 238
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
+GI LY R + RF S + S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|402862668|ref|XP_003895669.1| PREDICTED: putative RNA-binding protein 11 [Papio anubis]
Length = 281
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|336472211|gb|EGO60371.1| hypothetical protein NEUTE1DRAFT_119564 [Neurospora tetrasperma
FGSC 2508]
gi|350294569|gb|EGZ75654.1| RNA-binding domain-containing protein [Neurospora tetrasperma
FGSC 2509]
Length = 390
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GN+DE+ ++ +L +++ Q G V +++P+D+ + +G+ FVE+++ A+
Sbjct: 7 QNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAE 66
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA K+ +GI ++ + +R + DK
Sbjct: 67 YAAKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD Q G+++ I RD + + KG+ FV + S E +D A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFGSFEASDAA 156
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
+G L + T+ +A K ++ L++ + + VP
Sbjct: 157 RATMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|357617301|gb|EHJ70708.1| putative peptidyl-prolyl cis-trans isomerase E [Danaus plexippus]
Length = 303
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ NS +Y+G L E+V E++L I G +VD+ IP D E++K +GFAF+E+E+
Sbjct: 1 MASKPNSKRTIYVGGLAEEVDEKILNAAFIPFGDLVDVQIPLDYESEKHRGFAFIEFENA 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKS 107
E A AI + L+ RT+R ++ + + S T P+ S S
Sbjct: 61 EDAAAAIDNMND-SELFGRTIRVNIAAPQRIKEGS---TRPVWSEDS 103
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V E+VL+ I G +VD+ IP D ET K +GFAFVE+E E A AI
Sbjct: 9 VYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETQKHRGFAFVEFEQAEDAAAAIDNM 68
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 69 ND-SELFGRTIRVNIA 83
>gi|114683624|ref|XP_531391.2| PREDICTED: splicing regulator RBM11 [Pan troglodytes]
Length = 281
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|390478095|ref|XP_003735419.1| PREDICTED: putative RNA-binding protein 11-like [Callithrix
jacchus]
Length = 238
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|169234630|ref|NP_658983.3| splicing regulator RBM11 [Homo sapiens]
gi|9978670|sp|P57052.1|RBM11_HUMAN RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|7768750|dbj|BAA95545.1| RBM11 [Homo sapiens]
gi|119630467|gb|EAX10062.1| RNA binding motif protein 11, isoform CRA_c [Homo sapiens]
Length = 281
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|452981005|gb|EME80765.1| hypothetical protein MYCFIDRAFT_139429 [Pseudocercospora
fijiensis CIRAD86]
Length = 301
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ G V+IGN+ VSE + DI +AG+VV+ + DKET +PKGF F+EY
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDT 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMT 98
+ A A++ + L RTLR S ++ T N + T
Sbjct: 61 DAAASAVRNLNDF-DLKGRTLRVDYSNDNRGTSNQNQT 97
>gi|395821254|ref|XP_003783961.1| PREDICTED: putative RNA-binding protein 11 [Otolemur garnettii]
Length = 237
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E Y+I L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHAESVSYSIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSD--------PVP-VPVN 117
+GI LY R + RF S + S + ++S R++ P+P P+N
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPATQSFESCVKINSHSYRNEEMVGRSSFPMPFFPIN 129
Query: 118 GMEISHHSMRISGTRH 133
H H
Sbjct: 130 NTASPHEEFFFQKMWH 145
>gi|397496846|ref|XP_003819236.1| PREDICTED: putative RNA-binding protein 11 [Pan paniscus]
Length = 281
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|440893645|gb|ELR46339.1| Putative RNA-binding protein 11 [Bos grunniens mutus]
Length = 246
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|355747455|gb|EHH51952.1| RNA-binding motif protein 11 [Macaca fascicularis]
Length = 281
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|116198017|ref|XP_001224820.1| hypothetical protein CHGG_07164 [Chaetomium globosum CBS 148.51]
gi|88178443|gb|EAQ85911.1| hypothetical protein CHGG_07164 [Chaetomium globosum CBS 148.51]
Length = 529
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GN+DE+ ++ +L +++ Q G V +++P+D+ + +G+ FVE+++ A+Y
Sbjct: 136 NKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 195
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKN 91
A K+ +GI ++ + +R + DK
Sbjct: 196 ASKVLNGI-RIWGKPIRVNKASADKQ 220
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD Q G+++ I RD + + KG+ FV ++S E +D A
Sbjct: 226 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFDSFEASDAA 284
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
+ +G L T+ +A K ++ L++ + + VP
Sbjct: 285 VGTMNGQYLLSKSITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 332
>gi|109065778|ref|XP_001083260.1| PREDICTED: putative RNA-binding protein 11 [Macaca mulatta]
gi|355560395|gb|EHH17081.1| RNA-binding motif protein 11 [Macaca mulatta]
Length = 281
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|291222246|ref|XP_002731128.1| PREDICTED: peptidylprolyl isomerase E-like [Saccoglossus
kowalevskii]
Length = 307
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V E+VL+ I G +VD+ IP D ET+K +GF+FVE+E+ E A AI
Sbjct: 8 VYVGGLAEEVDEKVLHAAFIPFGDLVDIQIPLDYETEKHRGFSFVEFENPEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 ND-SELFGRTIRVNLA 82
>gi|402467760|gb|EJW03010.1| hypothetical protein EDEG_02592 [Edhazardia aedis USNM 41457]
Length = 213
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
GC VY+GN+D ++E+ L + L GRVV+ + DK+T + KG+ F EYE+ IA+ A+
Sbjct: 4 GCTVYVGNIDFDITEQELIEKLSSIGRVVNFKMMIDKQTGRSKGYGFCEYETPLIAETAV 63
Query: 68 KLFSGIVTLYNRTLRFALSGQDKNTQNSSM--TTTPLSSRKSRSDPV 112
+ V L NR L+ + D ++ + + P+ S KS D +
Sbjct: 64 QKLK--VVLNNRQLKINYADVDMSSSRKEIPQVSLPIESLKSVVDEM 108
>gi|332229296|ref|XP_003263827.1| PREDICTED: splicing regulator RBM11 [Nomascus leucogenys]
Length = 281
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|358410117|ref|XP_003581718.1| PREDICTED: putative RNA-binding protein 11-like [Bos taurus]
gi|296491598|tpg|DAA33639.1| TPA: RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|195997155|ref|XP_002108446.1| hypothetical protein TRIADDRAFT_19129 [Trichoplax adhaerens]
gi|190589222|gb|EDV29244.1| hypothetical protein TRIADDRAFT_19129, partial [Trichoplax
adhaerens]
Length = 102
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNLD+KV++++LY++ ++AG + + +P+D T +G+ FV Y A YA +LF
Sbjct: 21 LYVGNLDKKVTDKILYELFVKAGSISRINLPKDDTTGDIRGYGFVYYNRNVSALYATELF 80
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
+G++ L+ + +R L+ +++ +
Sbjct: 81 NGLL-LFQKPMRVNLNSKERKS 101
>gi|85101406|ref|XP_961142.1| hypothetical protein NCU04182 [Neurospora crassa OR74A]
gi|11595719|emb|CAC18197.1| probable spliceosome-associated protein SAP-49 [Neurospora
crassa]
gi|28922682|gb|EAA31906.1| hypothetical protein NCU04182 [Neurospora crassa OR74A]
Length = 390
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GN+DE+ ++ +L +++ Q G V +++P+D+ + +G+ FVE+++ A+
Sbjct: 7 QNKDATVYVGNIDERFTQELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAE 66
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA K+ +GI ++ + +R + DK
Sbjct: 67 YAAKVLNGI-RVWGKPIRVNKASADKQ 92
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD Q G+++ I RD + + KG+ FV + S E +D A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNIVRD-DNNISKGYGFVSFGSFEASDAA 156
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
+G L + T+ +A K ++ L++ + + VP
Sbjct: 157 RATMNGQYLLSKQITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|297707634|ref|XP_002830605.1| PREDICTED: putative RNA-binding protein 11 [Pongo abelii]
Length = 281
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|94966923|ref|NP_001035657.1| putative RNA-binding protein 11 [Bos taurus]
gi|74267635|gb|AAI02761.1| RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|432893293|ref|XP_004075907.1| PREDICTED: RNA-binding protein 7-like isoform 1 [Oryzias latipes]
Length = 260
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++I NLD KV+E +L+++ +QAG +V IP+D + + K F FV Y+ E A YA++L
Sbjct: 11 LFIRNLDSKVTEELLFELFLQAGPLVRTKIPKDTD-GRQKTFGFVVYKHEVSAPYAMQLL 69
Query: 71 SGIVTLYNRTLRFAL-SGQDK-----NTQNSSMTTTP 101
G +L+ R + SG N+QNSS TP
Sbjct: 70 DG-TSLFGRNIHVQFRSGSSHGSTPGNSQNSSPAITP 105
>gi|403286148|ref|XP_003934367.1| PREDICTED: putative RNA-binding protein 11 [Saimiri boliviensis
boliviensis]
Length = 237
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|367003291|ref|XP_003686379.1| hypothetical protein TPHA_0G01080 [Tetrapisispora phaffii CBS 4417]
gi|357524680|emb|CCE63945.1| hypothetical protein TPHA_0G01080 [Tetrapisispora phaffii CBS 4417]
Length = 220
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
NS VY+GN+D +V+ +LY++ +Q + + P+DK +G+AF+++ +E+ Y
Sbjct: 9 NSNKTVYVGNIDPQVTLDILYELFVQVAPISSIKYPKDKVLQAYQGYAFIDFFTEDDVQY 68
Query: 66 AIKLFSGIVTLYNRTLR-----FALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVP 115
IK+ + V LY + L+ +ALS N N + T + + +PVP
Sbjct: 69 VIKVMNNTVRLYGKLLKVRLSNYALSASTANASNKTET--------ANVEILPVP 115
>gi|350404096|ref|XP_003487002.1| PREDICTED: hypothetical protein LOC100742776 [Bombus impatiens]
Length = 195
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL +KV+E +LY++ +QAG V ++ IP+D+ K + F FV Y+ YA++LF
Sbjct: 8 LWCGNLSDKVTEEILYELFLQAGPVQNVTIPKDR-NGKQRPFGFVTYKHVNSVLYALELF 66
Query: 71 SGIVTLYNRTLRFA 84
+G +L+NR L +
Sbjct: 67 NG-TSLFNRILNIS 79
>gi|432893900|ref|XP_004075908.1| PREDICTED: RNA-binding protein 7-like isoform 2 [Oryzias latipes]
Length = 238
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++I NLD KV+E +L+++ +QAG +V IP+D + + K F FV Y+ E A YA++L
Sbjct: 11 LFIRNLDSKVTEELLFELFLQAGPLVRTKIPKDTD-GRQKTFGFVVYKHEVSAPYAMQLL 69
Query: 71 SGIVTLYNRTLRFAL-SGQDK-----NTQNSSMTTTP 101
G +L+ R + SG N+QNSS TP
Sbjct: 70 DG-TSLFGRNIHVQFRSGSSHGSTPGNSQNSSPAITP 105
>gi|426392612|ref|XP_004062641.1| PREDICTED: splicing regulator RBM11 [Gorilla gorilla gorilla]
Length = 239
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|392884214|gb|AFM90939.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G ++D+ IP D ET+K +GFAFVE+E+ E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|387915672|gb|AFK11445.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G ++D+ IP D ET+K +GFAFVE+E+ E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
Length = 158
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N +Y G L E+V E VL I G ++D+ IP D ET+K +GFAF+E+ES E A
Sbjct: 3 TNQKRTIYAGGLAEEVDENVLNAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFESAEDAA 62
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKS 107
AI + L+ RT+R L+ K + S T P+ S S
Sbjct: 63 AAIDNMND-SELFGRTIRVNLAKPQKIKEGS---TKPVWSEDS 101
>gi|291400883|ref|XP_002716809.1| PREDICTED: RNA binding motif protein 7-like [Oryctolagus
cuniculus]
Length = 238
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|344276876|ref|XP_003410231.1| PREDICTED: putative RNA-binding protein 11-like [Loxodonta
africana]
Length = 238
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|209882389|ref|XP_002142631.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558237|gb|EEA08282.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 213
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N +Y GNLD +V E +L ++ Q G + +YIPRDK T GF F+E++
Sbjct: 22 DKNQEATLYCGNLDNRVDEELLAELFAQTGPIKSVYIPRDKVTGTHSGFGFIEFQQVLDC 81
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDK 90
+YA ++ + V LY + +R + + QD+
Sbjct: 82 EYAQRILNS-VKLYGKPIRCSKASQDR 107
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N+++GNL + E++L+DI G V+ + + + +G+ FV Y+S +D AI
Sbjct: 113 GANLFVGNLSPDIDEKLLHDIFSLFGNVISTKVIFKENNEDERGYGFVSYDSFNSSDNAI 172
Query: 68 KLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKS 107
+G NR T+ +A K ++ S L+S+ +
Sbjct: 173 ATLNGQF-FGNRQITVSYAFKQDCKGERHGSTAERLLASKNT 213
>gi|440492608|gb|ELQ75160.1| mRNA cleavage and polyadenylation factor I complex, subunit RNA15
[Trachipleistophora hominis]
Length = 202
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
GC+V++GN+D V E L + L GRVV + D +T K KG+ F EYE++EIA A
Sbjct: 3 KGCSVFVGNIDFDVPEEKLIEQLGTIGRVVSFRMVYDHKTKKSKGYGFCEYETKEIAQLA 62
Query: 67 IKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
+K + ++ NR ++ + D +N+S + + + + + V
Sbjct: 63 VKSLN--ISFNNRQVKINYAENDMKRKNNSWKIEDVLKKMDKVNLLDV 108
>gi|332375218|gb|AEE62750.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E++ E VL I G +VD+ IP D E++K +GFAF+E+E+ E A A+
Sbjct: 9 VYVGGLAEEICEEVLKAAFIPFGDIVDIQIPLDYESEKHRGFAFIEFETSEDAGAAVDNM 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ K + S+
Sbjct: 69 ND-AELFGRTIRVNLAKPQKIKEGST 93
>gi|268569440|ref|XP_002640523.1| Hypothetical protein CBG18685 [Caenorhabditis briggsae]
Length = 84
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S SG +VY+GN + +E+ + D AG V ++ I D+ET +P+GFAFVE+ E A+
Sbjct: 2 SGSGFSVYVGNAPYQTTEQEMGDFFATAGEVTNVRIVLDRETGRPRGFAFVEFAEEAGAN 61
Query: 65 YAIKLFSGIVTLYN-RTLRFALS 86
A++ F+G T +N R+LR L+
Sbjct: 62 RAVEQFNG--TDFNGRSLRVNLA 82
>gi|39930581|ref|NP_938044.1| splicing regulator RBM11 [Mus musculus]
gi|81912952|sp|Q80YT9.1|RBM11_MOUSE RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|29747748|gb|AAH50779.1| Rbm11 protein [Mus musculus]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
+GI LY R + RF S + S + ++S R+D
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 113
>gi|395526569|ref|XP_003765433.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Sarcophilus
harrisii]
Length = 301
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ K + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMKIKEGSS 92
>gi|301757276|ref|XP_002914487.1| PREDICTED: putative RNA-binding protein 11-like [Ailuropoda
melanoleuca]
gi|281347610|gb|EFB23194.1| hypothetical protein PANDA_002377 [Ailuropoda melanoleuca]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKTFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
+GI LY R + RF S + S + ++S R++ V
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEV 115
>gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus]
gi|148665853|gb|EDK98269.1| RNA binding motif protein 11, isoform CRA_b [Mus musculus]
Length = 237
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 11 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 69
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
+GI LY R + RF S + S + ++S R+D
Sbjct: 70 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 112
>gi|126330203|ref|XP_001365208.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Monodelphis domestica]
Length = 301
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ K + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMKIKEGSS 92
>gi|57108733|ref|XP_535558.1| PREDICTED: putative RNA-binding protein 11 [Canis lupus
familiaris]
Length = 238
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKTFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|161899049|ref|XP_001712751.1| mRNA splicing factor 3b4 [Bigelowiella natans]
gi|75756244|gb|ABA27139.1| mRNA splicing factor 3b4 [Bigelowiella natans]
Length = 208
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 15 NLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIV 74
NLD KV+E +L+++ +Q G + +++PRD +D+ G+AF+EYE+E A+Y IK+ S +
Sbjct: 25 NLDLKVNEEILWELFLQTGPLRSIFLPRDPLSDRHFGYAFIEYETELDANYTIKILSPL- 83
Query: 75 TLYNRTL 81
L+N+ +
Sbjct: 84 RLFNKLI 90
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDK-PKGFAFVEYESEE 61
G+ ++G +YIGN+++ E+++Y G +V I T+K K +A + Y+S +
Sbjct: 99 GSYSTGACLYIGNINKNTDEKLIYSTFSSFGNIVKAPILSKTFTNKGVKYYALITYDSYD 158
Query: 62 IADYAI-----KLFSG 72
AD AI ++F+G
Sbjct: 159 SADAAIYNMNGQMFNG 174
>gi|405968843|gb|EKC33872.1| Peptidyl-prolyl cis-trans isomerase E [Crassostrea gigas]
Length = 302
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V E+ L+ I G ++D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 9 VYVGGLAEEVDEKTLHAAFIPFGDILDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ ++ RTLR ++ K + SS
Sbjct: 69 ND-SEMFGRTLRVNMAKPMKLKEGSS 93
>gi|327285414|ref|XP_003227428.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Anolis
carolinensis]
Length = 301
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ERVL+ I G + D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLAEEVDERVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|340914842|gb|EGS18183.1| hypothetical protein CTHT_0061980 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 392
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ A+
Sbjct: 8 QNKDATVYVGNIDERFTHELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAE 67
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKN 91
YA K+ +GI ++ + +R + DK
Sbjct: 68 YAAKVLNGI-RIWGKPIRVNKASADKQ 93
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD V E++LYD Q G ++ + RD E + KG+ FV ++S E +D A
Sbjct: 99 GAELFINNLDPLVDEKILYDTFSQFGTILRQPNVVRD-ENNISKGYGFVSFDSFEASDAA 157
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNT 92
I +G L + T+ +A K T
Sbjct: 158 IANMNGQYLLSKQITVEYAYKKDGKET 184
>gi|149059695|gb|EDM10578.1| RNA binding motif protein 11 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 176
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSD--------PVP-VPVN 117
+GI LY R + RF S + S + ++S R+D PVP P+
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRNDEMVCRPSFPVPFFPIT 129
Query: 118 GMEISHHSMRISGTRHYS 135
+ + Y+
Sbjct: 130 SAALPQEYFFFQKMQWYT 147
>gi|41053977|ref|NP_956219.1| RNA-binding protein 7 [Danio rerio]
gi|29436971|gb|AAH49507.1| Zgc:77304 [Danio rerio]
Length = 252
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD +V+E V++++ +QAG ++ + IP++ E K K FAFV ++ E YA+ L
Sbjct: 11 LFVGNLDPQVTEEVIFELFLQAGPLIKVKIPKNNEG-KSKLFAFVNFKHEVSVPYALNLL 69
Query: 71 SGIVTLYNRTLRFAL----------SGQDKNTQNSSMTTTP 101
+GI L+ R L N+QN S TP
Sbjct: 70 NGI-RLHGRQLNIKFKTGSSHINQEGKSPANSQNPSPANTP 109
>gi|367025735|ref|XP_003662152.1| hypothetical protein MYCTH_2302391 [Myceliophthora thermophila
ATCC 42464]
gi|347009420|gb|AEO56907.1| hypothetical protein MYCTH_2302391 [Myceliophthora thermophila
ATCC 42464]
Length = 404
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GN+DE+ + +L +++ Q G V +++P+D+ + +G+ FVE+++ A+Y
Sbjct: 8 NKDATVYVGNIDERFTHELLSELMTQVGPVRQVHMPQDRVSQTHQGYGFVEFDTPASAEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKN 91
A K+ +GI ++ + +R + DK
Sbjct: 68 ASKVLNGI-RIWGKPIRVNKASADKQ 92
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G ++I NLD +V E++LYD Q G+++ + RD + + KG+ FV ++S E +D A
Sbjct: 98 GAELFINNLDPQVDEKILYDTFSQFGQILRQPNVVRD-DNNISKGYGFVSFDSFEASDAA 156
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
I +G L T+ +A K ++ L++ + + VP
Sbjct: 157 IATMNGQYLLSKAITVEYAYKKDGKGERHGDEAERKLAAEGKKHNIVP 204
>gi|383860928|ref|XP_003705939.1| PREDICTED: putative RNA-binding protein 11-like [Megachile
rotundata]
Length = 193
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V+ GNL EKV+E +LY++ +Q G V + IP+D++ + + + F+ Y+ YA+ LF
Sbjct: 8 VWCGNLSEKVTEEILYELFLQGGPVQRVIIPKDRD-GRQRTYGFITYKHINSVKYALSLF 66
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTT 100
G + L+NR L + KNT++ +T T
Sbjct: 67 DGTI-LFNRPLSMSTK---KNTESPQITNT 92
>gi|366989575|ref|XP_003674555.1| hypothetical protein NCAS_0B00950 [Naumovozyma castellii CBS 4309]
gi|342300419|emb|CCC68179.1| hypothetical protein NCAS_0B00950 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N VY+GN+D KV++ LY++ IQ + L P+DK +G+AF+E+ + +
Sbjct: 6 NNPETTVYVGNIDPKVTKEQLYELFIQVSPISKLRYPKDKILQMHQGYAFIEFYTAKDVQ 65
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPV 114
Y I++ + V LY+R L+ S Q+ SSM S ++S +P+
Sbjct: 66 YVIQVMNNTVALYDRFLKVRQSVQNP---TSSMGGANTSENSNQSIVLPI 112
>gi|449488973|ref|XP_004186222.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans
isomerase E [Taeniopygia guttata]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ + + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMRIKEGSS 92
>gi|121543726|gb|ABM55548.1| putative peptidyl-prolyl cis-trans isomerase E [Maconellicoccus
hirsutus]
Length = 291
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L +++ E++L ++ + G ++D+ IP D ET+K +GFAF+E+E+ E A AI
Sbjct: 9 IYVGGLADELDEKILNNVFLTFGDILDIQIPLDYETEKHRGFAFIEFEAPEDAAAAIDNM 68
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ K + S+
Sbjct: 69 NE-SELFGRTMRVNLAKPQKVKEGST 93
>gi|148665852|gb|EDK98268.1| RNA binding motif protein 11, isoform CRA_a [Mus musculus]
Length = 254
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 12/115 (10%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSDPV------PVP 115
+GI LY R + RF S + S + ++S R+D + PVP
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRNDEMAGRPSFPVP 124
>gi|387017750|gb|AFJ50993.1| Peptidyl-prolyl cis-trans isomerase E-like [Crotalus adamanteus]
Length = 301
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ERVL+ I G + D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLAEEVDERVLHAAFIPFGDLTDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N C +++ ++ E V+E +L ++ +Q G VV + IPRD+ T++ G+AFVE+ +E+
Sbjct: 7 DQNKDCTLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDC 66
Query: 64 DYAIKLFSGIVTLYNRTLRFA 84
YA+ + G V L+ L+ +
Sbjct: 67 MYALSVMQG-VKLFGVPLKLS 86
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +YIGNL + V++ L Q G V+ + D T K G FV Y+S + AD A
Sbjct: 100 GAKLYIGNLSQDVNDGNLLQTFRQFGNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAK 159
Query: 68 KLFSG 72
K +G
Sbjct: 160 KAMNG 164
>gi|348508380|ref|XP_003441732.1| PREDICTED: RNA-binding protein 7-like [Oreochromis niloticus]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V+I NLD KV+E +L+++ +QAG +V IP+D + + K F F Y+ + YA++L
Sbjct: 11 VFIRNLDTKVTEELLFELFLQAGPLVKTKIPKDAD-GRQKTFGFAVYKHDVSVPYAVQLL 69
Query: 71 SGIVTLYNRTLRFAL-SGQDK-----NTQNSSMTTTP 101
+G + LY R + SG N+QN+S +TP
Sbjct: 70 NGTM-LYGRNIHVQFRSGSSHCSNPGNSQNTSPASTP 105
>gi|330799143|ref|XP_003287607.1| hypothetical protein DICPUDRAFT_151707 [Dictyostelium purpureum]
gi|325082393|gb|EGC35876.1| hypothetical protein DICPUDRAFT_151707 [Dictyostelium purpureum]
Length = 266
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N + + +LD V+E +L ++ IQA VV ++IP+DK T + G A+VE++S A+Y
Sbjct: 10 NHDACLIVRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHTGRAYVEFQSSADAEY 69
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ V L+N+ ++ DK
Sbjct: 70 ALKVMK-FVRLFNKEIKIKKESTDK 93
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 17/151 (11%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPR--DKETDKPKGFAFVEYESEEIADY 65
G N++IGNLD V ER+L+D + G + L+ P+ E + KGF F+ ++S + +D
Sbjct: 97 GANLFIGNLDTDVDERILFDTFSRFGTI--LFTPKIMRDENGQSKGFGFISFDSFDASDA 154
Query: 66 AIKLFSGIVTLYNRTLRFALS-GQDKNTQNSSMTTTPLSSRKS-----RSDPVPVPVNGM 119
AI+ +G L N+ + + + +D N ++ S +++ +S +S +P P
Sbjct: 155 AIESLNGQF-LCNKPISVSYARKKDSNEKHGSKAERIIAASRSAGGFNQSGAIPPP---- 209
Query: 120 EISHHSMRISGTRHYSSEEPP-PPGVTHESN 149
++ + +S+++PP PP + N
Sbjct: 210 -LTAGGLMPPPPPSFSTQQPPLPPQFSQPPN 239
>gi|453084590|gb|EMF12634.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 344
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ G V+IGN+ VSE + DI +AG+VV+ + DKET +PKGF F+EY
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQIMDIFGRAGQVVNFRLVYDKETGQPKGFGFLEYTDT 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKS 107
+ A A++ + L RTLR S +++ S T P S ++
Sbjct: 61 DAAASAVRNLNE-SDLNGRTLRVDYSNDNRSAGGSGNQTQPPESNRA 106
>gi|118101790|ref|XP_423739.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Gallus gallus]
Length = 301
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|345319884|ref|XP_001515609.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Ornithorhynchus anatinus]
Length = 300
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSMRISG 130
+ L+ RT+R L+ M SSR PV + + S +
Sbjct: 68 NE-SELFGRTIRVNLA--------KPMRIKEGSSR-------PVWSDDEWLKKFSGKTLE 111
Query: 131 TRHYSSEEPPPP 142
++ EPP P
Sbjct: 112 SKEEEGSEPPKP 123
>gi|410898226|ref|XP_003962599.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Takifugu
rubripes]
gi|19526273|gb|AAL89667.1|AF411956_8 cyclophilin [Takifugu rubripes]
Length = 300
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG L E+V E+VL+ I G ++D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYIGGLAEEVDEKVLHAAFIPFGDLIDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|47219549|emb|CAG09903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 326
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG L E+V E+VL+ I G ++D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYIGGLAEEVDEKVLHAAFIPFGDLIDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|185177638|pdb|2YWK|A Chain A, Crystal Structure Of Rrm-Domain Derived From Human
Putative Rna-Binding Protein 11
Length = 95
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
V++GNL+ +V E +LY++ +QAG + + I +D+E KPK F FV ++ E YAI L
Sbjct: 18 TVFVGNLEARVREEILYELFLQAGPLTKVTICKDRE-GKPKSFGFVCFKHPESVSYAIAL 76
Query: 70 FSGIVTLYNRTL 81
+GI LY R +
Sbjct: 77 LNGI-RLYGRPI 87
>gi|452823774|gb|EME30782.1| mRNA splicing factor, putative isoform 2 [Galdieria sulphuraria]
Length = 308
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 13 IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSG 72
+GN+ SE L +IL Q G ++ + D+ET KPKG+AF EY E+A AI+ +G
Sbjct: 26 VGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAIRNLNG 85
Query: 73 IVTLYNRTLRFALSGQDK 90
L RTLR L+ DK
Sbjct: 86 -TELNGRTLRVDLADSDK 102
>gi|157787052|ref|NP_001099368.1| RNA binding motif protein 11 [Rattus norvegicus]
gi|149059696|gb|EDM10579.1| RNA binding motif protein 11 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 144
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + + +D++ KPK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTLCKDRD-GKPKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSD 110
+GI LY R + RF S + S + ++S R+D
Sbjct: 71 NGI-RLYGRPINVQYRFGSSRSSEPANQSFESCAKINSHSFRND 113
>gi|289742363|gb|ADD19929.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Glossina
morsitans morsitans]
Length = 305
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VYIG+L ++V+E++L + I G + D+ IP D E+ K +GFAF+EYES E A
Sbjct: 3 SNDKRTVYIGSLADEVTEKLLNNAFIPFGDIADIQIPVDYESQKHRGFAFIEYESAEDAA 62
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 63 SAIDNMND-SELCGRTIRVNLA 83
>gi|348517411|ref|XP_003446227.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Oreochromis niloticus]
Length = 302
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G ++D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTVRVNIA 82
>gi|221119399|ref|XP_002162311.1| PREDICTED: uncharacterized protein LOC100198013 [Hydra
magnipapillata]
Length = 273
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C V++ N++ +V+E +L+++ +QAG + +++IP D+ + K K FAFV Y ++ +
Sbjct: 10 CTVFVSNIESRVTEELLWELFLQAGPLKNVHIPIDRSSGKSKTFAFVTYSDISAVAFSCE 69
Query: 69 LFSGIVTLYNRTL 81
LF+ + L+NR +
Sbjct: 70 LFN-TLKLFNRPI 81
>gi|444315954|ref|XP_004178634.1| hypothetical protein TBLA_0B02730 [Tetrapisispora blattae CBS
6284]
gi|387511674|emb|CCH59115.1| hypothetical protein TBLA_0B02730 [Tetrapisispora blattae CBS
6284]
Length = 255
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 44/60 (73%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNLD ++++ LY++ IQ G++ + PRDK ++ +GFAFVE++S + ++Y + LF
Sbjct: 26 IYVGNLDPRITKLDLYELFIQFGKIYKINYPRDKISENYQGFAFVEFQSAKDSNYVLSLF 85
>gi|332248424|ref|XP_003273363.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2
[Nomascus leucogenys]
Length = 314
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|156717426|ref|NP_001096253.1| RNA binding motif protein 11 [Xenopus (Silurana) tropicalis]
gi|134025425|gb|AAI35424.1| LOC100124814 protein [Xenopus (Silurana) tropicalis]
Length = 243
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD V+E +LY++ +QAG + + I +DKE + K F FV ++ E YA L
Sbjct: 12 LFVGNLDCSVNEEILYELFLQAGPLTKVTIAKDKEGNS-KAFGFVCFKHSESVPYAKALL 70
Query: 71 SGIVTLYNRTLRF------ALSGQDKNTQNSS 96
+GI LY R ++ + S ++ NT SS
Sbjct: 71 NGI-RLYGRPIKVHYQFGSSFSAEENNTLQSS 101
>gi|303305009|ref|NP_001181936.1| peptidyl-prolyl cis-trans isomerase E isoform 4 [Homo sapiens]
gi|208967014|dbj|BAG73521.1| peptidylprolyl isomerase E [synthetic construct]
Length = 314
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|299473131|emb|CBN78707.1| Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]
Length = 135
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
NVY+G L+E+V+E +L+ + G +V++ +P+D + +GF FVE+E EE A AI
Sbjct: 10 NVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVEEDAKAAIDN 69
Query: 70 FSGIVTLYNRTLR 82
G LY + LR
Sbjct: 70 MDG-AELYGKVLR 81
>gi|73917051|gb|AAZ93379.1| cyclophilin-33B [Homo sapiens]
Length = 314
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|213512892|ref|NP_001134807.1| peptidyl-prolyl cis-trans isomerase E [Salmo salar]
gi|209736222|gb|ACI68980.1| Peptidyl-prolyl cis-trans isomerase E [Salmo salar]
Length = 302
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G V D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDVTDIQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|332248426|ref|XP_003273364.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 3
[Nomascus leucogenys]
Length = 296
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|159163861|pdb|2CQB|A Chain A, Solution Structure Of The Rna Recognition Motif In
Peptidyl- Prolyl Cis-Trans Isomerase E
Length = 102
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
SG + + +Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E
Sbjct: 6 SGMATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAE 65
Query: 62 IADYAIKLFSGIVTLYNRTLRFALS 86
A AI + L+ RT+R L+
Sbjct: 66 DAAAAIDNMNE-SELFGRTIRVNLA 89
>gi|347967477|ref|XP_307927.5| AGAP002256-PA [Anopheles gambiae str. PEST]
gi|333466277|gb|EAA03752.5| AGAP002256-PA [Anopheles gambiae str. PEST]
Length = 255
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL E+V+E +LY++ +QAG V ++ IPRD + + + +AF+ + +YA+ +F
Sbjct: 8 LWCGNLSERVTEEMLYELFLQAGPVENVKIPRDADR-RQRNYAFITFAHVCSVEYAMDIF 66
Query: 71 SGIVTLYNRTL 81
G TL+ RTL
Sbjct: 67 EG-TTLFQRTL 76
>gi|195150527|ref|XP_002016202.1| GL11464 [Drosophila persimilis]
gi|194110049|gb|EDW32092.1| GL11464 [Drosophila persimilis]
Length = 302
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQAEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFAL---------------SGQDKNTQNSSMTTTPLSSRKSRS 109
AI + L RT+R L + D +++ T P + ++
Sbjct: 62 SAIDNMND-SELCGRTIRVNLAKPVRVKEDSFKPVWADDDWLQKHAGATLEPAEAGEAEK 120
Query: 110 DPVPVPVNG 118
+PV P G
Sbjct: 121 EPVEAPSTG 129
>gi|119627661|gb|EAX07256.1| peptidylprolyl isomerase E (cyclophilin E), isoform CRA_b [Homo
sapiens]
gi|410226050|gb|JAA10244.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410268070|gb|JAA22001.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410307920|gb|JAA32560.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
Length = 296
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|291399196|ref|XP_002715239.1| PREDICTED: peptidylprolyl isomerase E [Oryctolagus cuniculus]
Length = 296
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|410966852|ref|XP_003989941.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2 [Felis
catus]
Length = 296
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|311258960|ref|XP_003127865.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Sus scrofa]
Length = 301
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|45439316|ref|NP_982281.1| peptidyl-prolyl cis-trans isomerase E isoform 2 [Homo sapiens]
gi|2828151|gb|AAC00007.1| cyclophilin-33B [Homo sapiens]
gi|4406229|gb|AAD19907.1| peptidyl-prolyl cis-trans isomerase E [Homo sapiens]
Length = 296
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|326431234|gb|EGD76804.1| RNA-binding protein 7 [Salpingoeca sp. ATCC 50818]
Length = 899
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+S S +Y+GNLD +V++ +LY++ +QA V + I RD E + P+GFAFV+
Sbjct: 279 LSAPCRSNSTLYVGNLDTRVTDEILYELFLQACPVDGVAIARDPEGN-PRGFAFVDCVDV 337
Query: 61 EIADYAIKLFSGIVTLYNRTLRF 83
A YA +L +G V L+ + +R
Sbjct: 338 PSALYAKQLLNG-VALFGKHIRI 359
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
NS +Y+G L E+V E+VL I G + ++ +P D +T+K +GFAF+EYE A
Sbjct: 5 NSKKTLYVGGLAEEVDEKVLKGAFIPFGEITEVQVPIDYQTEKHRGFAFIEYEEPRDAAA 64
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
AI LY RTLR L+ PL ++S S PV
Sbjct: 65 AIDNMHD-SELYGRTLRVNLA-------------KPLRLKESSSKPV 97
>gi|444706912|gb|ELW48229.1| Peptidyl-prolyl cis-trans isomerase E [Tupaia chinensis]
Length = 301
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|301624824|ref|XP_002941698.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Xenopus
(Silurana) tropicalis]
Length = 301
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E++L+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDEKILHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELPEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|344287649|ref|XP_003415565.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Loxodonta
africana]
Length = 301
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149693770|ref|XP_001503484.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 2
[Equus caballus]
Length = 296
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|351713681|gb|EHB16600.1| Peptidyl-prolyl cis-trans isomerase E [Heterocephalus glaber]
Length = 301
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|238231621|ref|NP_001153996.1| peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
gi|225703282|gb|ACO07487.1| Peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
Length = 302
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI--- 67
+Y+G L E+V E+VL+ I G V D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDVTDIQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 68 ---KLFSGIV 74
+LF G +
Sbjct: 68 NESELFGGTI 77
>gi|114145536|ref|NP_001041333.1| peptidyl-prolyl cis-trans isomerase E [Rattus norvegicus]
gi|33086482|gb|AAP92553.1| Ab1-210 [Rattus norvegicus]
Length = 255
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ + + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMRIKEGSS 92
>gi|14196340|ref|NP_062362.1| peptidyl-prolyl cis-trans isomerase E [Mus musculus]
gi|37154834|sp|Q9QZH3.2|PPIE_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName:
Full=Cyclophilin-33; AltName: Full=Rotamase E
gi|12842203|dbj|BAB25512.1| unnamed protein product [Mus musculus]
gi|28278787|gb|AAH45154.1| Peptidylprolyl isomerase E (cyclophilin E) [Mus musculus]
gi|148698442|gb|EDL30389.1| peptidylprolyl isomerase E (cyclophilin E) [Mus musculus]
Length = 301
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|47210698|emb|CAF96067.1| unnamed protein product [Tetraodon nigroviridis]
Length = 223
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
++I NLD +V+E +L+++ +QAG +V IP+D E + K F F Y+ E YA++L
Sbjct: 10 TLFIRNLDARVTEELLFELFLQAGPLVKTRIPKDPEGRQ-KSFGFAVYKHEVSVPYAMQL 68
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSMTTT 100
G L+ R+L ++ N+ + T
Sbjct: 69 LDG-TPLFGRSLHVQFRSGSSHSSNAQKSPT 98
>gi|431922548|gb|ELK19491.1| Peptidyl-prolyl cis-trans isomerase E [Pteropus alecto]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|348553004|ref|XP_003462317.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cavia
porcellus]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|2828149|gb|AAC00006.1| cyclophilin-33A [Homo sapiens]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|296488946|tpg|DAA31059.1| TPA: peptidylprolyl isomerase E [Bos taurus]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|158259649|dbj|BAF85783.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|328869602|gb|EGG17979.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 670
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD +V E++L+D IQ G ++ I RD T KGF FV Y++ +D +
Sbjct: 486 GANLFIGNLDAEVDEKILHDTFIQFGAIIQPPKIMRDTSTGVSKGFGFVSYDNFASSDAS 545
Query: 67 IKLFSGIVTLYNRTLRFALS-GQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHS 125
I+ +G L N+ + + +D ++ S +++ K R P+ GM
Sbjct: 546 IEAMNGEF-LCNKPISVTYARKKDSTEKHGSQAERMIAAGKQRGIPMFAQFGGM------ 598
Query: 126 MRISGTRHYSSEEPPPPGV 144
PPPPG+
Sbjct: 599 -------------PPPPGI 604
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+ + ++D +V+E +L++++IQ VV +++P+DK T + G A+VE++SE ADYA+++
Sbjct: 401 IQVRDIDPQVTEALLWELMIQVAPVVKVFMPKDKLTQQHSGRAYVEFQSENDADYAMRIL 460
Query: 71 SGIVTLYNRTLRF 83
+ + L+ R ++
Sbjct: 461 N-YIKLFGRPIKL 472
>gi|148238144|ref|NP_001091630.1| peptidyl-prolyl cis-trans isomerase E [Bos taurus]
gi|251823903|ref|NP_001156520.1| peptidyl-prolyl cis-trans isomerase E [Ovis aries]
gi|182676483|sp|A4FV72.1|PPIE_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase
E
gi|133777612|gb|AAI23819.1| PPIE protein [Bos taurus]
gi|238799776|gb|ACR55760.1| peptidylprolyl isomerase E [Ovis aries]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|300708086|ref|XP_002996230.1| hypothetical protein NCER_100689 [Nosema ceranae BRL01]
gi|239605513|gb|EEQ82559.1| hypothetical protein NCER_100689 [Nosema ceranae BRL01]
Length = 211
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
SGC+V++GN+D +V L + L G+VVD + DK T+K KGF F EYES IA+ A
Sbjct: 3 SGCSVFVGNIDFEVPVDKLIEELGAVGKVVDFKLMVDKNTNKSKGFGFCEYESPLIAEKA 62
Query: 67 IK 68
IK
Sbjct: 63 IK 64
>gi|355713007|gb|AES04539.1| peptidylprolyl isomerase E [Mustela putorius furo]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149693768|ref|XP_001503477.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Equus caballus]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|432095454|gb|ELK26650.1| Peptidyl-prolyl cis-trans isomerase E [Myotis davidii]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|403292044|ref|XP_003937068.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Saimiri boliviensis boliviensis]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|354485865|ref|XP_003505102.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cricetulus
griseus]
gi|344236478|gb|EGV92581.1| Peptidyl-prolyl cis-trans isomerase E [Cricetulus griseus]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|296207581|ref|XP_002750690.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Callithrix jacchus]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|148236416|ref|NP_001090502.1| peptidylprolyl isomerase E (cyclophilin E) [Xenopus laevis]
gi|114107971|gb|AAI23372.1| MGC154898 protein [Xenopus laevis]
Length = 294
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E++L+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 1 MYLGGLAEEVDEKILHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELPEDAAAAIDNM 60
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 61 NE-SELFGRTIRVNLA 75
>gi|109002460|ref|XP_001113613.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 3
[Macaca mulatta]
gi|332248422|ref|XP_003273362.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Nomascus leucogenys]
gi|402854044|ref|XP_003891690.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Papio anubis]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|440898130|gb|ELR49690.1| Peptidyl-prolyl cis-trans isomerase E, partial [Bos grunniens
mutus]
Length = 280
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149023873|gb|EDL80370.1| peptidylprolyl isomerase E (cyclophilin E) [Rattus norvegicus]
gi|165970632|gb|AAI58561.1| Ppie protein [Rattus norvegicus]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|395853060|ref|XP_003799038.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Otolemur
garnettii]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|17508587|ref|NP_493023.1| Protein R09B3.3 [Caenorhabditis elegans]
gi|3879016|emb|CAB03237.1| Protein R09B3.3 [Caenorhabditis elegans]
Length = 85
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
SG +VY+GN + +E L + QAG V ++ I D+ET +P+GFAFVE+ E A A
Sbjct: 2 SGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
Query: 67 IKLFSGIVTLYNRTLRFALSGQDKN 91
+ F+G V R LR L+ Q++N
Sbjct: 62 VDQFNG-VDFNGRALRVNLA-QNRN 84
>gi|73976759|ref|XP_848739.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2 [Canis
lupus familiaris]
gi|410966850|ref|XP_003989940.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Felis
catus]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|149693777|ref|XP_001503512.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Equus caballus]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|197098002|ref|NP_001126436.1| peptidyl-prolyl cis-trans isomerase E [Pongo abelii]
gi|75041350|sp|Q5R723.1|PPIE_PONAB RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase
E
gi|55731450|emb|CAH92437.1| hypothetical protein [Pongo abelii]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|5174637|ref|NP_006103.1| peptidyl-prolyl cis-trans isomerase E isoform 1 [Homo sapiens]
gi|332808526|ref|XP_001171465.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 8 [Pan
troglodytes]
gi|397488858|ref|XP_003815459.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Pan
paniscus]
gi|426329070|ref|XP_004025567.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Gorilla gorilla gorilla]
gi|13124097|sp|Q9UNP9.1|PPIE_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName:
Full=Cyclophilin-33; AltName: Full=Rotamase E
gi|4406227|gb|AAD19906.1| peptidyl-prolyl cis-trans isomerase E [Homo sapiens]
gi|13436167|gb|AAH04898.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|14250089|gb|AAH08451.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|78395107|gb|AAI07737.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|119627660|gb|EAX07255.1| peptidylprolyl isomerase E (cyclophilin E), isoform CRA_a [Homo
sapiens]
gi|189053911|dbj|BAG36418.1| unnamed protein product [Homo sapiens]
gi|312150756|gb|ADQ31890.1| peptidylprolyl isomerase E (cyclophilin E) [synthetic construct]
gi|410226048|gb|JAA10243.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410268072|gb|JAA22002.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410307918|gb|JAA32559.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|311270146|ref|XP_003132786.1| PREDICTED: putative RNA-binding protein 11-like [Sus scrofa]
Length = 237
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GNL+ +V E +LY++ +QAG + + I +D++ + PK F FV ++ E YAI L
Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDRDGN-PKSFGFVCFKHPESVSYAIALL 70
Query: 71 SGIVTLYNRTL 81
+GI LY R +
Sbjct: 71 NGI-RLYGRPI 80
>gi|225716982|gb|ACO14337.1| Peptidyl-prolyl cis-trans isomerase E [Esox lucius]
Length = 302
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDITDIQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|449681524|ref|XP_002157695.2| PREDICTED: splicing factor 3B subunit 4-like [Hydra magnipapillata]
Length = 328
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD + E++LYD G ++ I RD ET KGFAF+ + S E
Sbjct: 52 NLDVGANIFIGNLDPDIDEKLLYDTFSAFGVILTTPKIMRDPETGNSKGFAFINFASFEA 111
Query: 63 ADYAIKLFSG 72
+D AI +G
Sbjct: 112 SDAAIDAMNG 121
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 40 IPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLR 82
+P+D+ T +G+ F+E+ SEE ADYAIK+ + ++ +Y + +R
Sbjct: 1 MPKDRITQNHQGYGFIEFMSEEDADYAIKILN-MIKVYGKPIR 42
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG LD ER L D+ + G VV + I +D+ET +P+GFAFVE++SEE A+ AI
Sbjct: 7 LYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDGC 66
Query: 71 SG 72
+G
Sbjct: 67 NG 68
>gi|410909686|ref|XP_003968321.1| PREDICTED: RNA-binding protein 7-like [Takifugu rubripes]
Length = 253
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++I NLD +V+E +L+++ +QAG +V IP+D + K K F F Y+ E YA++L
Sbjct: 11 LFIRNLDPRVTEELLFELFLQAGPLVRTRIPKDSDG-KQKSFGFAVYKHEVSVPYAMQLL 69
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTT 100
GI LY R L + N+ + T
Sbjct: 70 DGI-PLYRRNLHVQFRSGSSHGNNAQKSPT 98
>gi|254572433|ref|XP_002493326.1| hypothetical protein [Komagataella pastoris GS115]
gi|238033124|emb|CAY71147.1| hypothetical protein PAS_chr3_1252 [Komagataella pastoris GS115]
gi|328352657|emb|CCA39055.1| Polyadenylate-binding protein 1-B [Komagataella pastoris CBS
7435]
Length = 215
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +Y+GNL +V E+++Y++L+Q + L +P+D+ K G+ FVE ++ +Y
Sbjct: 2 NNDITLYVGNLAPEVDEKIIYELLVQIAPIRKLKLPKDRVLRKHLGYCFVELDNPTSCEY 61
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMT 98
A KL +G+ +YNR ++ S DK QN +T
Sbjct: 62 AEKLLNGL-YIYNRPIKVKRSIVDK--QNKLIT 91
>gi|170063251|ref|XP_001867022.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880929|gb|EDS44312.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL +KV+E +LY++ +QAG V + IPRD E + + +AF+ Y +YAI++F
Sbjct: 9 LWCGNLSDKVTEELLYELFVQAGPVQLVKIPRDNEK-RQRSYAFITYGHAASVEYAIEIF 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
G L+ R L L + KN N +
Sbjct: 68 EG-TKLFQRPL--TLHKKSKNGPNPA 90
>gi|67623141|ref|XP_667853.1| splicing factor [Cryptosporidium hominis TU502]
gi|32399025|emb|CAD98265.1| splicing factor, probable [Cryptosporidium parvum]
gi|54659016|gb|EAL37616.1| splicing factor [Cryptosporidium hominis]
Length = 213
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y GNL+ KV E +L ++ Q G V ++IPRDK T GF F+E+E +Y
Sbjct: 17 NQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEFEFVSDVEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + D+
Sbjct: 77 AQKVMNSI-KLFTKQIRCCKASNDR 100
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIP-RDKETDKPKGFAFVEYESEEIADYA 66
G N+Y+GNL ++ E+ L+ + G+++ L I D+ + PK AF+ + S + +D A
Sbjct: 106 GANLYVGNLSPEIDEKFLFYLFSNFGKILSLKIVGNDQSSQSPKNSAFINFSSFQESDSA 165
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
I+ +G + ++ +A KN ++ + L S KS++ P+
Sbjct: 166 IQALNGQFFCNQQISVSYAFKQNSKNEKHGNYAERLLES-KSKTKPI 211
>gi|229366886|gb|ACQ58423.1| Peptidyl-prolyl cis-trans isomerase E [Anoplopoma fimbria]
Length = 302
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELGEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLR 82
+ L+ RT+R
Sbjct: 68 NE-SELFGRTIR 78
>gi|225713872|gb|ACO12782.1| Peptidyl-prolyl cis-trans isomerase E [Lepeophtheirus salmonis]
Length = 311
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N+ +Y+G L E+V E+VL I G + ++ IP D +T+K +GFAF+EYE A
Sbjct: 4 ANTKKTLYVGGLAEEVEEKVLKAAFIPFGEITEVQIPIDYQTEKHRGFAFIEYEEPRDAT 63
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
AI L+ RTLR L+ PL ++S S PV
Sbjct: 64 AAIDNMHD-SELFGRTLRVNLA-------------KPLRLKESSSKPV 97
>gi|358060582|dbj|GAA93701.1| hypothetical protein E5Q_00346 [Mixia osmundae IAM 14324]
Length = 645
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G LDE ++E + I Q G VV++ +PRDK T KP+GFAFV YE + A+
Sbjct: 32 IYMGGLDEALTEGDVITIASQYGEVVNVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNL 91
Query: 71 SGIVTLYNRTLR 82
+G L RTLR
Sbjct: 92 TG-SKLLERTLR 102
>gi|358060581|dbj|GAA93700.1| hypothetical protein E5Q_00345 [Mixia osmundae IAM 14324]
Length = 641
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G LDE ++E + I Q G VV++ +PRDK T KP+GFAFV YE + A+
Sbjct: 32 IYMGGLDEALTEGDVITIASQYGEVVNVEMPRDKTTHKPRGFAFVMYEDQRSTVLAVDNL 91
Query: 71 SGIVTLYNRTLR 82
+G L RTLR
Sbjct: 92 TG-SKLLERTLR 102
>gi|66475928|ref|XP_627780.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46229319|gb|EAK90168.1| U2 snRNP. Hsh49p, RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 216
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +Y GNL+ KV E +L ++ Q G V ++IPRDK T GF F+E+E +Y
Sbjct: 20 NQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEFEFVSDVEY 79
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + I L+ + +R + D+
Sbjct: 80 AQKVMNSI-KLFTKQIRCCKASNDR 103
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIP-RDKETDKPKGFAFVEYESEEIADYA 66
G N+Y+GNL ++ E+ L+ + G+++ L I D+ + PK AF+ + S + +D A
Sbjct: 109 GANLYVGNLSPEIDEKFLFYLFSNFGKILSLKIVGNDQSSQSPKNSAFINFSSFQESDSA 168
Query: 67 IKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPV 112
I+ +G + ++ +A KN ++ + L S KS++ P+
Sbjct: 169 IQALNGQFFCNQQISVSYAFKQNSKNEKHGNYAERLLES-KSKTKPI 214
>gi|255572355|ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor, putative [Ricinus communis]
Length = 509
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +S C V++GN+ +E L DI + G VV + D+ET KPKG+ F EY+ E
Sbjct: 1 MASSSQQRC-VFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
E A A + G + R LR + DKN
Sbjct: 60 ETALSARRNLQG-YEINGRQLRVDFAENDKNA 90
>gi|6007762|gb|AAF01030.1|AF182825_1 cyclophilin-33 [Mus musculus]
Length = 298
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 5 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAPAIDNM 64
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 65 NE-SELFGRTIRVNLA 79
>gi|195035923|ref|XP_001989421.1| GH10062 [Drosophila grimshawi]
gi|193905421|gb|EDW04288.1| GH10062 [Drosophila grimshawi]
Length = 251
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ NLDE+VSE +LY++ +QAG + ++ IP D + + F FV Y+ + YA+ L+
Sbjct: 78 LFCNNLDERVSEEILYEVFLQAGPIENVRIPLDN-AGRQRNFGFVTYQHKSAVPYAVDLY 136
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSS 104
G+ L+ + L +K + P S
Sbjct: 137 QGL-ELFQKKLTIRQQCVEKPKHQQGRSRNPFSQ 169
>gi|148234921|ref|NP_001084686.1| uncharacterized protein LOC414646 [Xenopus laevis]
gi|46249522|gb|AAH68729.1| MGC81187 protein [Xenopus laevis]
Length = 246
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD V+E +LY++ +QAG + + + +DKE + K F FV ++ E YA L
Sbjct: 12 LFVGNLDCSVNEEILYELFLQAGPLTKVTVAKDKEGNS-KAFGFVCFKHSESVPYAKALL 70
Query: 71 SGIVTLYNRTLRF------ALSGQDKNTQNSS 96
+GI LY R ++ + S ++ NT +SS
Sbjct: 71 NGI-RLYGRPIKVHYQFGSSFSSEEINTPHSS 101
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
GN N+ +++G L + +E L GRV+D I RDK T P+GF FV +E EE
Sbjct: 44 GNQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEES 103
Query: 63 ADYA 66
AD A
Sbjct: 104 ADRA 107
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ V+E L DI +AG VV I D+ET KPKG+ F EY +E A A++
Sbjct: 15 SVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMRN 74
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 75 LNGY-EIAGRTLRV 87
>gi|225703276|gb|ACO07484.1| Peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
Length = 302
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G V D IP D ET+K +GFAF+E+E E A AI
Sbjct: 8 LYVGGLTEEVDEKVLHAAFIPFGDVTDTQIPIDYETEKHRGFAFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|398396524|ref|XP_003851720.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
gi|339471600|gb|EGP86696.1| hypothetical protein MYCGRDRAFT_73484 [Zymoseptoria tritici IPO323]
Length = 321
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ G V+IGN+ VSE + DI + G+VV + DKET +PKGF F+EY
Sbjct: 1 MATREKGGRVVFIGNIPYDVSEEQIMDIFGRTGQVVGFRLVYDKETQQPKGFGFLEYTDA 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGME 120
+ A A++ + L RTLR S ++ T N+ + S+ P P
Sbjct: 61 DSAASAVRNLNDF-ELNGRTLRVDYSNDNRGTTNNK------DQNQEHSNRAPPP----- 108
Query: 121 ISHHSMRISGTRHYSSEE--PP----PPGVT 145
+H +M S + ++ PP PPGVT
Sbjct: 109 -AHFNMNQSAPPNAAALPTLPPGTELPPGVT 138
>gi|300193098|pdb|2KU7|A Chain A, Solution Structure Of Mll1 Phd3-Cyp33 Rrm Chimeric Protein
Length = 140
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 66 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 125
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 126 NE-SELFGRTIRVNLA 140
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL V+E VL DI G V ++ I +D+ T G AFV++E + A A+K
Sbjct: 7 LYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALKTI 66
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+G + LYN+ +R + Q + T+N++
Sbjct: 67 NGRI-LYNKEVRIQWAFQKEKTENTA 91
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N+ S ++++GNL V++ VL G D + D T + KGF FV + ++E A
Sbjct: 89 NTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDARVMWDHSTGRSKGFGFVSFRTKEAA 148
Query: 64 DYAIKLFSG 72
+ A+ G
Sbjct: 149 EKALAEMDG 157
>gi|226484710|emb|CAX74264.1| ATP-binding protein involved in chromosome partitioning
[Schistosoma japonicum]
gi|226484712|emb|CAX74265.1| ATP-binding protein involved in chromosome partitioning
[Schistosoma japonicum]
Length = 225
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGN++ K++ +LY++ +QAG + D+ + K+T FAFV +E EE YA LF
Sbjct: 7 LYIGNINSKITTELLYELFLQAGPLEDVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 71 SGIVTLYNRTL 81
GI TLY R L
Sbjct: 59 EGI-TLYGREL 68
>gi|413934108|gb|AFW68659.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 270
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E++LYD G +V + I RD ET +GF FV YES E +D A
Sbjct: 24 GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQA 83
Query: 67 IK 68
I+
Sbjct: 84 IE 85
>gi|167521049|ref|XP_001744863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776477|gb|EDQ90096.1| predicted protein [Monosiga brevicollis MX1]
Length = 307
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V+E VL D + G +++L +P D +T KGFAF+EY + E A+ AI
Sbjct: 10 LYVGGLAEEVTEEVLRDAFVPFGDILELQLPLDFQTQDHKGFAFIEYATLEDAEAAIDNM 69
Query: 71 SGIVTLYNRTLRFALSGQDKN 91
LY RTLR ++ +N
Sbjct: 70 HE-SELYGRTLRVNVANVTRN 89
>gi|209155164|gb|ACI33814.1| RNA-binding protein 7 [Salmo salar]
Length = 93
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD KV+E +L+++ +QAG + + IP+D + K K F FV ++ E Y + L
Sbjct: 11 LFVGNLDPKVTEELLFELFLQAGPMFKVKIPKDND-GKQKAFGFVCFKHEVSVPYGMNLL 69
Query: 71 SGIVTLYNRTLR 82
+G TL+ RTL+
Sbjct: 70 NG-ATLFGRTLK 80
>gi|58803060|gb|AAW82658.1| cyclophilin [Haemonchus contortus]
Length = 324
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V+E+VL I G +V + IP D ET K +GF FVE+E E A AI
Sbjct: 14 LYVGGFGEEVTEKVLMAAFITFGDIVAISIPMDYETGKHRGFGFVEFELAEDAAAAIDNM 73
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R + K T+ SS
Sbjct: 74 NE-SELFGRTIRCNFARPPKATERSS 98
>gi|340371235|ref|XP_003384151.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Amphimedon
queenslandica]
Length = 306
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V+E++L+ I G +VD+ IP D + K +GFAFVE+E+ E A AI
Sbjct: 12 LYVGGLSEEVNEKILHSAFIPFGDIVDISIPLDYSSQKHRGFAFVEFEATEDAAAAIDNM 71
Query: 71 SGIVTLYNRTLRFALS 86
++ RT+R ++
Sbjct: 72 DN-SEIFGRTIRVNIA 86
>gi|260787321|ref|XP_002588702.1| hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]
gi|229273870|gb|EEN44713.1| hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 12 YIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFS 71
+ G L E+V E+VL+ I G +VD+ IP D ET K +GFAFVE+E E A AI
Sbjct: 4 FPGGLAEEVDEKVLHAAFIPFGDLVDINIPLDYETQKHRGFAFVEFEGAEDAAAAIDNMH 63
Query: 72 GIVTLYNRTLRFALS 86
L+ RT+R L+
Sbjct: 64 -ESELFGRTIRCNLA 77
>gi|390341388|ref|XP_799104.3| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Strongylocentrotus purpuratus]
Length = 313
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+SN+ Y+G L E+V+E+ L+ I G ++D+ IP D ET+K +GFAFVE+E E
Sbjct: 3 SSNTKRIAYVGGLAEEVTEKTLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFEFAEDC 62
Query: 64 DYAIKLFSGIVTLYNRTLRFALS 86
+I + L+ RT+R L+
Sbjct: 63 AASIDNMND-SELFGRTIRVNLA 84
>gi|148232600|ref|NP_001086129.1| RNA binding motif protein 11 [Xenopus laevis]
gi|49257848|gb|AAH74235.1| MGC83967 protein [Xenopus laevis]
Length = 255
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD V+E +LY++ +QAG + I +DKE + K F F+ ++ E YA L
Sbjct: 12 LFVGNLDCNVNEEILYELFLQAGPLTKATIAKDKEGNS-KAFGFIRFKHSESVPYAKALL 70
Query: 71 SGIVTLYNRTLR 82
+GI LY R ++
Sbjct: 71 NGI-RLYGRAIK 81
>gi|338175402|ref|YP_004652212.1| hypothetical protein PUV_14080 [Parachlamydia acanthamoebae UV-7]
gi|336479760|emb|CCB86358.1| putative uncharacterized protein [Parachlamydia acanthamoebae
UV-7]
Length = 111
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL KV++ +L + + G+VV + I D+ T K KGF FVE ES E AD AI+
Sbjct: 5 IFVGNLSWKVTDDILRSVFEKIGKVVSVKIITDQYTGKSKGFGFVEMESSEDADKAIREL 64
Query: 71 SGIVTLYNRTLRFALS 86
+ L +R +R +L+
Sbjct: 65 NETAVL-DRNIRVSLA 79
>gi|125986686|ref|XP_001357106.1| GA11013 [Drosophila pseudoobscura pseudoobscura]
gi|54645433|gb|EAL34172.1| GA11013 [Drosophila pseudoobscura pseudoobscura]
Length = 238
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLD++V+E +LY++ +QAG + + IP D T + + F FV Y+ +A++L+
Sbjct: 62 LFCGNLDQRVTEEILYEVFVQAGPIEGVRIPSD-NTGRQRNFGFVIYQRISAVPFALELY 120
Query: 71 SGIVTLYNRTLRFALSGQDK 90
G+ L+ + + G DK
Sbjct: 121 QGL-ELFQKKVTIKQQGADK 139
>gi|157138134|ref|XP_001664142.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108869557|gb|EAT33782.1| AAEL013948-PA [Aedes aegypti]
Length = 304
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+E+++ D I G +VD+ +P D E+ K +GFAF+E+ES E A
Sbjct: 2 SNDKRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
A+ + L RT+R ++
Sbjct: 62 AAVDNMND-SELCGRTIRVNIA 82
>gi|195575453|ref|XP_002077592.1| GD23003 [Drosophila simulans]
gi|194189601|gb|EDX03177.1| GD23003 [Drosophila simulans]
Length = 238
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y GNLDE+V+E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 73 LYCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 131
Query: 71 SGIVTLYNRTLRFALSG 87
G+ L+ + + G
Sbjct: 132 QGL-ELFQKKVTIKQQG 147
>gi|62955333|ref|NP_001017678.1| peptidyl-prolyl cis-trans isomerase E [Danio rerio]
gi|62531317|gb|AAH93329.1| Peptidylprolyl isomerase E (cyclophilin E) [Danio rerio]
Length = 302
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAF+E+E E + AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDSAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|282890465|ref|ZP_06298988.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|281499462|gb|EFB41758.1| hypothetical protein pah_c022o030 [Parachlamydia acanthamoebae
str. Hall's coccus]
Length = 113
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL KV++ +L + + G+VV + I D+ T K KGF FVE ES E AD AI+
Sbjct: 7 IFVGNLSWKVTDDILRSVFEKIGKVVSVKIITDQYTGKSKGFGFVEMESSEDADKAIREL 66
Query: 71 SGIVTLYNRTLRFALS 86
+ L +R +R +L+
Sbjct: 67 NETAVL-DRNIRVSLA 81
>gi|432937500|ref|XP_004082430.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Oryzias
latipes]
Length = 302
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GF F+E+E E A AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFGFIEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|182889546|gb|AAI65323.1| Ppie protein [Danio rerio]
Length = 302
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E+VL+ I G + D+ IP D ET+K +GFAF+E+E E + AI
Sbjct: 8 LYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDSAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R ++
Sbjct: 68 NE-SELFGRTIRVNIA 82
>gi|195160160|ref|XP_002020944.1| GL13956 [Drosophila persimilis]
gi|194117894|gb|EDW39937.1| GL13956 [Drosophila persimilis]
Length = 238
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLD++V+E +LY++ +QAG + + IP D T + + F FV Y+ +A++L+
Sbjct: 62 LFCGNLDQRVTEEILYEVFVQAGPIEGVRIPSD-NTGRQRNFGFVIYQRISAVPFALELY 120
Query: 71 SGIVTLYNRTLRFALSGQDK 90
G+ L+ + + G DK
Sbjct: 121 QGL-ELFQKKVTIKQQGADK 139
>gi|67970111|dbj|BAE01400.1| unnamed protein product [Macaca fascicularis]
Length = 301
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET++ +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEEHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|157115630|ref|XP_001658271.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108876827|gb|EAT41052.1| AAEL007273-PA [Aedes aegypti]
Length = 303
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+E+++ D I G +VD+ +P D E+ K +GFAF+E+ES E A
Sbjct: 2 SNDKRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAA 61
Query: 65 YAI 67
A+
Sbjct: 62 AAV 64
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N S +V++GN+ V+E + I +AG V+ + + D+ET KPKG+ F+E+ A
Sbjct: 13 NERSQRSVFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTA 72
Query: 64 DYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTT 100
D AI++ +G L R LR + N + T T
Sbjct: 73 DTAIRVLNG-YELGGRVLRVDSAAGGMNMEEFGSTNT 108
>gi|156102134|ref|XP_001616760.1| spliceosome-associated protein 49 [Plasmodium vivax Sal-1]
gi|148805634|gb|EDL47033.1| spliceosome-associated protein 49, putative [Plasmodium vivax]
Length = 479
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD +V E++L+DI G++V + I RD E D KG F+ Y++ E +D AI
Sbjct: 106 GANLFIGNLDAEVDEKMLFDIFSSFGQLVTVRIIRD-ENDTSKGHGFISYDNFESSDMAI 164
Query: 68 K 68
+
Sbjct: 165 E 165
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +YI NLD +V E +L ++ +Q G V +++IPRDK G+ FVEYE E +Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGYGFVEYEYEYECEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTKLFGKPLRCNKASQDK 100
>gi|269862977|ref|XP_002651049.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065210|gb|EED43006.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 171
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ S GC V+IGN+D + E + L G+V + DK T K KG+ F EYE+
Sbjct: 1 MTEPSKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETP 60
Query: 61 EIADYAIK 68
E+AD A+K
Sbjct: 61 EVADMALK 68
>gi|312370863|gb|EFR19173.1| hypothetical protein AND_22952 [Anopheles darlingi]
Length = 259
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VYIG L E+V+++++ D I G +VD+ +P D E+ K +GFAF+E+E+ E A
Sbjct: 2 SNDKRTVYIGGLSEEVTDKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLR 82
A+ + L RT+R
Sbjct: 62 AAVDNMND-SELCGRTIR 78
>gi|380016422|ref|XP_003692184.1| PREDICTED: putative RNA-binding protein 11-like [Apis florea]
Length = 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL EKV+E +LY++ +Q G V + IP+D++ K + + FV Y+ YA++LF
Sbjct: 8 LWCGNLSEKVTEEILYELFLQGGPVQRVTIPKDRDG-KQRTYGFVTYKHINSVLYALELF 66
Query: 71 SGIVTLYNRTLRFA 84
G +L+NR L +
Sbjct: 67 DG-TSLFNRPLNMS 79
>gi|269859935|ref|XP_002649691.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|269863259|ref|XP_002651156.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220065037|gb|EED42901.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220066886|gb|EED44356.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 241
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ S GC V+IGN+D + E + L G+V + DK T K KG+ F EYE+
Sbjct: 27 MTEPSKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETP 86
Query: 61 EIADYAIK 68
E+AD A+K
Sbjct: 87 EVADMALK 94
>gi|195382061|ref|XP_002049750.1| GJ20579 [Drosophila virilis]
gi|194144547|gb|EDW60943.1| GJ20579 [Drosophila virilis]
Length = 302
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+ER+L + I G + D+ +P D E+ K +GFAF+EYE+ E A
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|417409425|gb|JAA51218.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 294
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 1 IYGGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 60
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 61 NE-SELFGRTIRVNLA 75
>gi|195025318|ref|XP_001986035.1| GH20760 [Drosophila grimshawi]
gi|193902035|gb|EDW00902.1| GH20760 [Drosophila grimshawi]
Length = 304
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+ER+L + I G + D+ +P D E+ K +GFAF+EYE+ E A
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|320582964|gb|EFW97181.1| RRM 1 multi-domain protein [Ogataea parapolymorpha DL-1]
Length = 981
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
++Y+GNLD KV E +LY++ +Q V + +P+DK + +G+ FVE+ + + +Y + +
Sbjct: 11 SLYLGNLDPKVDETLLYELFVQFAPVKSIRLPKDKVLRRHQGYGFVEFFNVKDCEYVLNI 70
Query: 70 FSGIVTLYNRTLR 82
SG+ +LY++ LR
Sbjct: 71 CSGL-SLYDKVLR 82
>gi|301792689|ref|XP_002931311.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Ailuropoda
melanoleuca]
Length = 116
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R L+ + + SS
Sbjct: 68 NE-SELFGRTIRVNLAKPMRIKEGSS 92
>gi|195584258|ref|XP_002081931.1| GD11288 [Drosophila simulans]
gi|194193940|gb|EDX07516.1| GD11288 [Drosophila simulans]
Length = 301
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN +Y+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A
Sbjct: 2 SNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 AAIDNMND-SELCGRTIRVNLA 82
>gi|158298753|ref|XP_318916.3| AGAP009810-PA [Anopheles gambiae str. PEST]
gi|157014037|gb|EAA14200.3| AGAP009810-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V+E+++ D I G +VD+ +P D E+ K +GFAF+E+E+ E A A+
Sbjct: 8 VYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAAAAVDNM 67
Query: 71 SGIVTLYNRTLR 82
+ L RT+R
Sbjct: 68 ND-SELCGRTIR 78
>gi|269865317|ref|XP_002651881.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
gi|220063702|gb|EED42174.1| cleavage and polyadenylation factor CF-IA component RNA15
[Enterocytozoon bieneusi H348]
Length = 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ S GC V+IGN+D + E + L G+V + DK T K KG+ F EYE+
Sbjct: 1 MTEPSKPGCTVFIGNIDFDIDEETIVKELSAVGKVKSFRLLYDKATGKSKGYGFCEYETP 60
Query: 61 EIADYAIK 68
E+AD A+K
Sbjct: 61 EVADMALK 68
>gi|195487862|ref|XP_002092072.1| GE11871 [Drosophila yakuba]
gi|194178173|gb|EDW91784.1| GE11871 [Drosophila yakuba]
Length = 300
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A AI
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L RT+R L+
Sbjct: 68 ND-SELCGRTIRVNLA 82
>gi|195123191|ref|XP_002006092.1| GI20843 [Drosophila mojavensis]
gi|193911160|gb|EDW10027.1| GI20843 [Drosophila mojavensis]
Length = 303
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+ER+L + I G + D+ +P D E+ K +GFAF+EYE+ E A
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|17647301|ref|NP_523773.1| cyclophilin-33 [Drosophila melanogaster]
gi|13124101|sp|Q9V3G3.1|PPIE_DROME RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin 33; AltName:
Full=Cyclophilin E; AltName: Full=Rotamase E
gi|6007764|gb|AAF01031.1|AF182826_1 cyclophilin-33 [Drosophila melanogaster]
gi|7302761|gb|AAF57839.1| cyclophilin-33 [Drosophila melanogaster]
gi|16769500|gb|AAL28969.1| LD35248p [Drosophila melanogaster]
gi|220954214|gb|ACL89650.1| cyp33-PA [synthetic construct]
Length = 300
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN +Y+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A
Sbjct: 2 SNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 AAIDNMND-SELCGRTIRVNLA 82
>gi|194880756|ref|XP_001974528.1| GG21795 [Drosophila erecta]
gi|190657715|gb|EDV54928.1| GG21795 [Drosophila erecta]
Length = 300
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A AI
Sbjct: 8 VYVGGLADEVTERLLNNAFIPFGDIADIQMPADFESQRHRGFAFIEYEQSEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L RT+R L+
Sbjct: 68 ND-SELCGRTIRVNLA 82
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C +YIG+LD V E + I G + + +PRD T+K KG+ FVEY +E AD AI
Sbjct: 152 CRIYIGSLDPDVKEEDIRTIFSSFGEITCIEMPRDPSTNKSKGYCFVEYRKKESADVAIV 211
Query: 69 LFSGI 73
G
Sbjct: 212 SMQGF 216
>gi|156540750|ref|XP_001599717.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like, partial
[Nasonia vitripennis]
Length = 247
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 14 GNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGI 73
G L E+V E++L I G +VD+ IP D E++K +GFAF+E+E+ E A AI +
Sbjct: 1 GGLAEEVDEKILNAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEAAEDAASAIDNMND- 59
Query: 74 VTLYNRTLRFALSGQDKNTQNSS 96
L+ RT+R ++ K + SS
Sbjct: 60 SELFGRTIRVNIAKPQKIKEGSS 82
>gi|351697169|gb|EHB00088.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 180
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
+S C+V++GN+ + SE L DI + G VV D+ET KPKG+ F EY+ +E A
Sbjct: 13 HSLCSVFVGNIPHEASEEQLRDIFSEVGPVVSFRWVYDRETGKPKGYGFCEYQDQETALS 72
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTT 99
A++ +G R LR + +KN + + T
Sbjct: 73 AMQHLNG-HEFSGRALRVDSAASEKNKELKCLGT 105
>gi|321464394|gb|EFX75402.1| hypothetical protein DAPPUDRAFT_323316 [Daphnia pulex]
Length = 249
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C +Y G+L KV+E +L+++ +QAG + + IP+ + + K F FVEY+ E DYAI+
Sbjct: 6 CTIYCGSLSPKVTEEILHELFLQAGPLKCVKIPKTPQGES-KLFGFVEYQHECSVDYAIQ 64
Query: 69 LFSGIVTLYNRTLRF 83
LF TL+ + L+
Sbjct: 65 LFHH-TTLFGQELQL 78
>gi|195350009|ref|XP_002041534.1| GM16717 [Drosophila sechellia]
gi|194123307|gb|EDW45350.1| GM16717 [Drosophila sechellia]
Length = 237
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 130
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHH 124
G+ L+ + + G Q + + L + P P PV S H
Sbjct: 131 HGL-ELFQKKVTIKQQG---CKQLPAYNQSRLRPFMMEAPPQPSPVRHARHSLH 180
>gi|195430772|ref|XP_002063422.1| GK21899 [Drosophila willistoni]
gi|194159507|gb|EDW74408.1| GK21899 [Drosophila willistoni]
Length = 223
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+ER+L + I G + D+ +P D E+ K +GFAF+EYE E A
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYEQFEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|392577429|gb|EIW70558.1| hypothetical protein TREMEDRAFT_71330 [Tremella mesenterica DSM
1558]
Length = 331
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N VY+GNLDEK ++ +++++++ ++++P+D+ + +GF F E+ +EE ++Y
Sbjct: 12 NQEATVYLGNLDEKCTDALIWELMLS----TNVFLPKDRISMNHQGFGFCEFLTEEDSEY 67
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A+K+ + I LY + +R + DK
Sbjct: 68 AVKIMNQI-KLYGKPIRVNKASYDK 91
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADYA 66
G N++IGNLD V E LYD G + + I RD T + KG+ FV Y + AD A
Sbjct: 97 GANLFIGNLDLNVDENALYDTFATFGSIAEHPKISRDPTTGQSKGYGFVSYHDFDAADMA 156
Query: 67 IKLFSG-IVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
I+ +G T+++A K ++ S L+++ +
Sbjct: 157 IENMNGQFFGGQQITVQYAFKKDGKGERHGSAAERLLAAQAKK 199
>gi|218441262|ref|YP_002379591.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218173990|gb|ACK72723.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL +V ++ L DI G+V +Y+P D+ET + +GFAFVE E+ ++ D AI
Sbjct: 3 IYVGNLAFEVEDKHLSDIFSDYGKVTRVYMPTDRETGQRRGFAFVEMETPQMEDAAISAL 62
Query: 71 SG 72
G
Sbjct: 63 DG 64
>gi|16769726|gb|AAL29082.1| LP01585p [Drosophila melanogaster]
Length = 232
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 66 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 124
Query: 71 SGI 73
G+
Sbjct: 125 QGL 127
>gi|322785970|gb|EFZ12586.1| hypothetical protein SINV_05042 [Solenopsis invicta]
Length = 375
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD +V E++LYD G ++ I RD ET KGFAF+ + S +
Sbjct: 56 NLDVGANIFIGNLDPEVDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGFAFINFASFDA 115
Query: 63 ADYAIKLFSG 72
+D +I+ +G
Sbjct: 116 SDASIEAMNG 125
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 36 VDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLR 82
V++++P+D+ T +G+ FVE+ EE ADYAIK+ + ++ LY + +R
Sbjct: 1 VNVHMPKDRVTQMHQGYGFVEFMGEEDADYAIKIMN-MIKLYGKPIR 46
>gi|328783380|ref|XP_394069.4| PREDICTED: putative RNA-binding protein 11-like isoform 1 [Apis
mellifera]
Length = 186
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL EKV+E +LY++ +Q G V + IP+D++ K + + FV Y+ YA++LF
Sbjct: 8 LWCGNLSEKVTEEILYELFLQGGPVQRVTIPKDRDG-KQRTYGFVTYKHINSVLYALELF 66
Query: 71 SGIVTLYNRTLRFA 84
G +L+NR L +
Sbjct: 67 DG-TSLFNRPLNMS 79
>gi|324515203|gb|ADY46121.1| Eukaryotic translation initiation factor 3 subunit G [Ascaris suum]
Length = 285
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 13 IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSG 72
+ NL E+ E L + Q G+V ++I +DK T+KPKGFAFV YE E A+ AI+ +G
Sbjct: 209 VTNLPEECDEMELRGLFTQIGQVSRVFIAKDKHTNKPKGFAFVTYEHREHAEMAIQKLNG 268
>gi|295982539|pdb|3MDF|A Chain A, Crystal Structure Of The Rrm Domain Of Cyclophilin 33
gi|295982540|pdb|3MDF|B Chain B, Crystal Structure Of The Rrm Domain Of Cyclophilin 33
Length = 85
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 10 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 69
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 70 NE-SELFGRTIRVNLA 84
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S S +V++GN+ +V E L + Q G VV L + D++T KPKG+ F EY +
Sbjct: 19 SATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQ 78
Query: 62 IADYAIKLFSGIVTLYNRTLRF-ALSGQDKNT 92
A+ AI+ +G L R LR + +G D++
Sbjct: 79 TAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S S +V++GN+ +V E L + Q G VV L + D++T KPKG+ F EY +
Sbjct: 19 SATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQ 78
Query: 62 IADYAIKLFSGIVTLYNRTLRF-ALSGQDKNT 92
A+ AI+ +G L R LR + +G D++
Sbjct: 79 TAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|449268619|gb|EMC79473.1| Peptidyl-prolyl cis-trans isomerase E, partial [Columba livia]
Length = 291
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 14 GNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGI 73
G L E+V E+VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI +
Sbjct: 1 GGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNE- 59
Query: 74 VTLYNRTLRFALS 86
L+ RT+R L+
Sbjct: 60 SELFGRTIRVNLA 72
>gi|304445488|pdb|2KYX|A Chain A, Solution Structure Of The Rrm Domain Of Cyp33
Length = 83
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 68 NE-SELFGRTIRVNLA 82
>gi|125808073|ref|XP_001360625.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
gi|54635797|gb|EAL25200.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
Length = 302
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN VY+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A
Sbjct: 2 SNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQAEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
AI + L RT+R L+
Sbjct: 62 SAIDNMND-SELCGRTIRVNLA 82
>gi|281337315|gb|EFB12899.1| hypothetical protein PANDA_022213 [Ailuropoda melanoleuca]
Length = 231
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S + + G + G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E
Sbjct: 114 SPHGSQGGFEHAGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAE 173
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
A AI + L+ RT+R L+ + + SS
Sbjct: 174 DAAAAIDNMNE-SELFGRTIRVNLAKPMRIKEGSS 207
>gi|194853227|ref|XP_001968127.1| GG24699 [Drosophila erecta]
gi|190659994|gb|EDV57186.1| GG24699 [Drosophila erecta]
Length = 238
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 71 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFAMDLY 129
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPL 102
G+ + G+ N S P
Sbjct: 130 QGLELFQKKVTIKQQGGKQLPAFNQSRLRNPF 161
>gi|363755690|ref|XP_003648060.1| hypothetical protein Ecym_7420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892096|gb|AET41243.1| hypothetical protein Ecym_7420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N+ +Y+GNLD +V++ LY++ +Q G V + +DK T + +GFAFVE+ +
Sbjct: 2 DQNNLYTIYVGNLDGQVTKEHLYELFVQMGPVYRIRYRKDKITQEYQGFAFVEFYTNSDC 61
Query: 64 DYAIKLFSGIVTLYNRTLR 82
++AIK + V+L+ + L+
Sbjct: 62 EFAIKSLNNSVSLFGKILK 80
>gi|60677845|gb|AAX33429.1| RE36241p [Drosophila melanogaster]
Length = 238
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 130
Query: 71 SGI 73
G+
Sbjct: 131 QGL 133
>gi|20129123|ref|NP_608497.1| CG11454 [Drosophila melanogaster]
gi|7296251|gb|AAF51542.1| CG11454 [Drosophila melanogaster]
Length = 238
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP D +P+ F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRPRNFGFVTYQRLCAVPFALDLY 130
Query: 71 SGI 73
G+
Sbjct: 131 QGL 133
>gi|238883601|gb|EEQ47239.1| hypothetical protein CAWG_05803 [Candida albicans WO-1]
Length = 259
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+ + N ++Y GN+D +V+E ++Y++ IQ G V + +P+D+ +G+ FVE+++
Sbjct: 9 LDSDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEFKNS 68
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
A Y +++ GI LY + L+ L D +Q+S+
Sbjct: 69 ADAKYTMEILRGI-RLYGKALK--LKRIDAKSQSST 101
>gi|448123377|ref|XP_004204677.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|448125660|ref|XP_004205235.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358249868|emb|CCE72934.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
gi|358350216|emb|CCE73495.1| Piso0_000540 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N ++Y N+D +V+E +LY++ IQ G V L +P+D+ +G+ FVE+++ + A+Y
Sbjct: 14 NINASLYFSNIDYQVTELLLYELFIQFGPVRTLNLPKDRILKTHQGYGFVEFKTAKDAEY 73
Query: 66 AIKLFSGIVTLYNRTLRF 83
+++ GI L+ + L+
Sbjct: 74 VLEILRGI-RLFGKVLKL 90
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVV-DLYIPRDKETDKPKGFAFVEYES 59
MSG + G ++I NL V E++L D + G ++ + RD ++ KG+ F+ Y+
Sbjct: 115 MSG-VDVGAKLFIKNLHPLVDEKMLRDTFSKFGNIIRPPVVARDPDSGASKGYGFITYDD 173
Query: 60 EEIADYAIKLFSGIVTLYNR 79
+D AI+ +G++ N+
Sbjct: 174 FAASDLAIEKMNGVILTNNK 193
>gi|294659049|ref|XP_461388.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
gi|202953578|emb|CAG89795.2| DEHA2F24068p [Debaryomyces hansenii CBS767]
Length = 252
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N ++Y GNLD +V+E +LY++ IQ + L +P+D+ +G+ F+E+ + + A+Y
Sbjct: 14 NVKASLYFGNLDPQVTEPLLYELFIQFAPIRSLNLPKDRVLKTHQGYGFIEFRTIKDAEY 73
Query: 66 AIKLFSGIVTLYNRTLRF 83
+ + GI LY + L+
Sbjct: 74 VLNILRGI-RLYGKMLKL 90
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
GN S +V++GN+ VSE + I +AG V+ + + D+ET KPKG+ F+E+ +
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQT 71
Query: 63 ADYAIKLFSGIVTLYNRTLR 82
A+ AI+ +G L R LR
Sbjct: 72 AEVAIRNLNG-YELSGRILR 90
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma
gondii ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma
gondii ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E VL + G + L IP+DK T +GF FVE+E E+ A A++
Sbjct: 23 LYVGGLAEQVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFVEFEEEDDAKEAMENM 82
Query: 71 SGIVTLYNRTLRFALS 86
LY RTLR LS
Sbjct: 83 DN-AELYGRTLRVNLS 97
>gi|7270986|emb|CAB77630.1| spliceosome-associated essential protein [Candida albicans]
Length = 257
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+ + N ++Y GN+D +V+E ++Y++ IQ G V + +P+D+ +G+ FVE+++
Sbjct: 7 LDSDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEFKNS 66
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
A Y +++ GI LY + L+ L D +Q+S+
Sbjct: 67 ADAKYTMEILRGI-RLYGKALK--LKRIDAKSQSST 99
>gi|68482438|ref|XP_714851.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|68482559|ref|XP_714789.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|46436383|gb|EAK95746.1| likely U2-associated splicing factor [Candida albicans SC5314]
gi|46436448|gb|EAK95810.1| likely U2-associated splicing factor [Candida albicans SC5314]
Length = 259
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+ + N ++Y GN+D +V+E ++Y++ IQ G V + +P+D+ +G+ FVE+++
Sbjct: 9 LDSDRNIDASLYFGNIDPQVTELLMYELFIQFGPVKSINMPKDRILKTHQGYGFVEFKNS 68
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSS 96
A Y +++ GI LY + L+ L D +Q+S+
Sbjct: 69 ADAKYTMEILRGI-RLYGKALK--LKRIDAKSQSST 101
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++G L ++E + I Q G ++D+ +PRDKET KP+GFAF+ YE + A+
Sbjct: 33 IFVGGLHNDLTEGDVITIFSQYGEIMDINMPRDKETGKPRGFAFLMYEDQRSTILAVDNL 92
Query: 71 SGIVTLYNRTLR 82
+G L RTLR
Sbjct: 93 NGAKVL-ERTLR 103
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ V+E + I +AG V+ + + D+ET KPKG+ F+E+ AD AI++
Sbjct: 14 VFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATADTAIRVL 73
Query: 71 SGIVTLYNRTLR 82
+G L R LR
Sbjct: 74 NG-YELGGRVLR 84
>gi|219111683|ref|XP_002177593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410478|gb|EEC50407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 125
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+GNLD ++E + +L Q G + DL++ R+++T K +GFAF +YE A+ F
Sbjct: 36 VYVGNLDHALTEGDVICVLSQYGEIEDLHLVREEDTGKSRGFAFCKYEDARSCVLAVDNF 95
Query: 71 SGIVTLYNRTLR 82
+GI L R+LR
Sbjct: 96 TGI-ELCGRSLR 106
>gi|67540172|ref|XP_663860.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|40739450|gb|EAA58640.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|259479533|tpe|CBF69842.1| TPA: peptidyl prolyl cis-trans isomerase Cyclophilin, putative
(AFU_orthologue; AFUA_2G12990) [Aspergillus nidulans
FGSC A4]
Length = 153
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 57
MS + C VY+G LD+ VS + L + + G VVD+ +P+ D +GF +VE+
Sbjct: 1 MSEKTRLKCTVYVGGLDQAVSVQTLAEAFVPFGEVVDITLPKPDLPNSNDNHRGFGYVEF 60
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
+S E A AI G LY RT++ A + K+
Sbjct: 61 DSPEDAKEAIDNMDG-SELYGRTIKVAPAKPQKDA 94
>gi|300193226|pdb|3LPY|A Chain A, Crystal Structure Of The Rrm Domain Of Cyp33
gi|300193227|pdb|3LPY|B Chain B, Crystal Structure Of The Rrm Domain Of Cyp33
Length = 79
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI
Sbjct: 5 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 64
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 65 NE-SELFGRTIRVNLA 79
>gi|452840079|gb|EME42017.1| hypothetical protein DOTSEDRAFT_72945 [Dothistroma septosporum
NZE10]
Length = 339
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ G V+IGN+ VSE ++ +I G+V++ + DKET +PKGF F+EY
Sbjct: 1 MATREKGGRVVFIGNIPYGVSEEMIMEIFSSCGKVMNFRLVYDKETGQPKGFGFLEYSDT 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQ 93
+ A AI+ + L RTLR S ++ T+
Sbjct: 61 DSAQSAIRNLNE-YELNGRTLRVDFSNDNRATK 92
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
MSG G +VY+GN + +E+ + D Q G V ++ I D+ET +P+GFAFVEY E
Sbjct: 1 MSG----GYSVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDE 56
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALS 86
+ A A+ +G R LR L+
Sbjct: 57 QSAQRAVNELNG-ADFNGRQLRVNLA 81
>gi|195335275|ref|XP_002034300.1| GM21798 [Drosophila sechellia]
gi|194126270|gb|EDW48313.1| GM21798 [Drosophila sechellia]
Length = 301
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
SN +Y+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EYE E A
Sbjct: 2 SNDKRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAA 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
A+ + L RT+R L+
Sbjct: 62 AAMDNMND-SELCGRTIRVNLA 82
>gi|307591599|ref|YP_003900398.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306986453|gb|ADN18332.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL +V ++ L ++ G+V ++IP D+ET + +GFAFVE E+ E+ D AI
Sbjct: 3 IYVGNLAFEVEDKHLSEVFSDYGKVTRVHIPTDRETGQRRGFAFVEMETAEMEDAAISAL 62
Query: 71 SGIVTLYNRTLRF--ALSGQDKNT 92
G R L+ A +D+N+
Sbjct: 63 DG-AEWMERELKVNKAREREDRNS 85
>gi|195114022|ref|XP_002001566.1| GI16471 [Drosophila mojavensis]
gi|193912141|gb|EDW11008.1| GI16471 [Drosophila mojavensis]
Length = 252
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ NLDE+V+E +LY++ +QAG + IP D T + + F FV Y+ + YA++L+
Sbjct: 74 LFCSNLDERVTEEILYEVFLQAGPIESARIPLDN-TGRQRNFGFVTYQHKIAVPYAVELY 132
Query: 71 SGIVTLYNRTLRFALSGQDK---NTQNSSMTTTPLSSRKSRSDPVPVPVN 117
G+ L+ + L +K + T P S + S P P PVN
Sbjct: 133 QGL-ELFQKKLIIRQQCPEKPKLSAMGQGRTRNPFS--QDFSSPAP-PVN 178
>gi|50305767|ref|XP_452844.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641977|emb|CAH01695.1| KLLA0C14388p [Kluyveromyces lactis]
Length = 203
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETD---KPKGFAFVEYESEEIADYAI 67
VY+GNLD +V++ +LY++ +QAG + + P++K+ + + +AF+++ ++++ DY
Sbjct: 5 VYVGNLDSRVNKSLLYELFVQAGPISYIKFPKEKQDEDDSQHSKYAFIKFVNDDV-DYVC 63
Query: 68 KLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSMR 127
KLF V+LY + L+ S + T + + S VP N +I +R
Sbjct: 64 KLFDNRVSLYGKPLKVRRSNKQPETTDFDVGAKLFVKNLDESIDVPQLSNIFKIFGKLLR 123
>gi|428169524|gb|EKX38457.1| hypothetical protein GUITHDRAFT_48511, partial [Guillardia theta
CCMP2712]
Length = 83
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G LD +++E + I Q G VD+++PRDK+T K GFAF+ YE + + A+
Sbjct: 12 IYVGGLDYRLTEGDVITIFSQYGEPVDVHLPRDKKTGKSHGFAFLAYEDQRSTNLAVDNL 71
Query: 71 SGIVTLYNRTLR 82
+G L RTLR
Sbjct: 72 NG-SKLLGRTLR 82
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
S +V++GN+ + S+ L DI QAG V+ + D+ET KPKG+ F EY+ E A
Sbjct: 23 KSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYDRETGKPKGYGFCEYKDSETAQS 82
Query: 66 AIKLFSGIVTLYNRTLR 82
A++ +G ++ R LR
Sbjct: 83 AMRNLNG-TEIHGRQLR 98
>gi|193582455|ref|XP_001947710.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Acyrthosiphon pisum]
Length = 298
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V ++VL I G +VD+ +P D E++K +GFAFVE+E E A +I
Sbjct: 15 VYVGGLAEEVDDKVLRSAFIPFGDIVDVQMPLDYESEKHRGFAFVEFEQPEDALDSIDNM 74
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ ++ RT+R L+ K + S+
Sbjct: 75 NE-AEIFGRTIRVNLAKPQKINRGST 99
>gi|239791068|dbj|BAH72048.1| ACYPI010179 [Acyrthosiphon pisum]
Length = 298
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G L E+V ++VL I G +VD+ +P D E++K +GFAFVE+E E A +I
Sbjct: 15 VYVGGLAEEVDDKVLRSAFIPFGDIVDVQMPLDYESEKHRGFAFVEFEQPEDALDSIDNM 74
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ ++ RT+R L+ K + S+
Sbjct: 75 NE-AEIFGRTIRVNLAKPQKINRGST 99
>gi|170046410|ref|XP_001850759.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
gi|167869182|gb|EDS32565.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
Length = 308
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
VY+G L ++V+E+++ D I G +VD+ +P D E+ K +GFAF+E+E+ E A A+
Sbjct: 8 VYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFENAEDAAAAV 64
>gi|76154543|gb|AAX26008.2| SJCHGC02654 protein [Schistosoma japonicum]
Length = 195
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGN++ +++ +LY++ +QAG + D+ + K+T FAFV +E EE YA LF
Sbjct: 7 LYIGNINSEITTELLYELFLQAGPLEDVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 71 SGIVTLYNRTL 81
GI TLY R L
Sbjct: 59 EGI-TLYGREL 68
>gi|71032451|ref|XP_765867.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352824|gb|EAN33584.1| hypothetical protein TP01_0340 [Theileria parva]
Length = 84
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
++I L + V +L+ Q G + DL IP+DK TDK +G AF+EYE EE A +AI
Sbjct: 7 IFIRGLSDDVDSNLLFSAFSQFGHITDLNIPKDKFTDKNRGIAFIEYEDEEDAKHAI 63
>gi|150866142|ref|XP_001385635.2| hypothetical protein PICST_84754 [Scheffersomyces stipitis CBS
6054]
gi|149387398|gb|ABN67606.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 246
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N ++Y GNLD +V+E ++Y++ IQ + L +P+D+ +G+ FVE+ + ADY
Sbjct: 14 NIDASLYFGNLDPEVTELIMYELFIQFAPLRYLNMPKDRILKTHQGYGFVEFRTVRDADY 73
Query: 66 AIKLFSGIVTLYNRTLR 82
A+ + G V LY + L+
Sbjct: 74 ALDILRG-VRLYGKQLK 89
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ G L+ +++E + I Q G ++D+ +PRDKET KPKGFAFV YE + A+
Sbjct: 33 IFAGGLNTELTEGDVITIFSQYGEIMDVNMPRDKETGKPKGFAFVMYEDQRSTVLAVDNL 92
Query: 71 SGIVTLYNRTLRF 83
+G L RT+R
Sbjct: 93 NGAKIL-ERTIRV 104
>gi|194756974|ref|XP_001960745.1| GF11346 [Drosophila ananassae]
gi|190622043|gb|EDV37567.1| GF11346 [Drosophila ananassae]
Length = 394
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 1 MSGN---SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 57
+ GN SN VY+G L ++V+ER+L + I G + D+ +P D E+ + +GFAF+EY
Sbjct: 89 LCGNESMSNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEY 148
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLRFALS 86
E E A AI + L RT+R L+
Sbjct: 149 EQGEDAASAIDNMND-SELCGRTIRVNLA 176
>gi|308504790|ref|XP_003114578.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
gi|308258760|gb|EFP02713.1| hypothetical protein CRE_28336 [Caenorhabditis remanei]
Length = 84
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S SG +VY+GN + +E+ L D G+V ++ I D+ET +P+GFAFVE+ E A
Sbjct: 2 SGSGFSVYVGNATYQTTEQELGDYFSTVGQVTNVRIVCDRETGRPRGFAFVEFADEAGAQ 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
A +G V R LR L+
Sbjct: 62 RACDQLNG-VDFNGRQLRVNLA 82
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++G L+ +++E + I Q G ++D+ +PR+KET KPKGFAFV YE + A+
Sbjct: 34 IFVGGLNRELTEGDVITIFSQYGEIMDINMPREKETGKPKGFAFVMYEDQRSTVLAVDNL 93
Query: 71 SGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 94 NG-SKVAERTLRV 105
>gi|378756227|gb|EHY66252.1| hypothetical protein NERG_00948 [Nematocida sp. 1 ERTm2]
Length = 211
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V++GN+D V E + + L GRV+ + D+ T K KG+ F YES +AD
Sbjct: 3 NRGCTVFVGNIDFTVPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYESPIVADI 62
Query: 66 AIKLFSGIVTLYNRTLRF 83
A+ + L NR ++
Sbjct: 63 AVNRLK--IMLNNRPVKI 78
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+++G + ++ +++ D Q GRVVD + DK+T +P+GF FV +ESEE D +K
Sbjct: 133 IFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVDACLK 190
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
++IG L+ + +++ L D Q G VV+ + RD T + +GF F+ ++ + + +
Sbjct: 49 MFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVM 105
>gi|195401044|ref|XP_002059124.1| GJ16219 [Drosophila virilis]
gi|194155998|gb|EDW71182.1| GJ16219 [Drosophila virilis]
Length = 249
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ NLDE+V+E +LY++ +QAG + IP D T + + F FV Y+ + +A++L+
Sbjct: 76 LFCNNLDERVTEEILYEVFLQAGPIESARIPLDN-TGRQRNFGFVTYQHKCAVPFAMELY 134
Query: 71 SGIVTLYNRTL 81
G+ + L
Sbjct: 135 QGLELFQKKVL 145
>gi|55960587|emb|CAI12647.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960979|emb|CAI12553.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
Length = 190
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 52 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 111
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 112 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 155
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 40 IPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLR 82
+P+D+ T + +G+ FVE+ SEE ADYAIK+ + ++ LY + +R
Sbjct: 1 MPKDRVTGQHQGYGFVEFLSEEDADYAIKIMN-MIKLYGKPIR 42
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNLD ++E + + Q GRV DL RDK+T PKGFAF+ Y+ A+
Sbjct: 33 IFVGNLDHGLTEGDIVAVFEQYGRVRDLNRARDKKTGDPKGFAFLGYQDPRSCILAVDNL 92
Query: 71 SGIVTLYNRTLR 82
+GI L RTLR
Sbjct: 93 NGI-QLVGRTLR 103
>gi|345312295|ref|XP_001516274.2| PREDICTED: splicing factor 3B subunit 4-like [Ornithorhynchus
anatinus]
Length = 372
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEI 62
N + G N++IGNLD ++ E++LYD G ++ I RD +T KG+AF+ + S +
Sbjct: 166 NLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDA 225
Query: 63 ADYAIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSR 105
+D AI+ +G L NR T+ +A K ++ S L+++
Sbjct: 226 SDAAIEAMNG-QYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQ 269
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 46 TDKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLR 82
+++ +G+ FVE+ SEE ADYAIK+ + ++ LY + +R
Sbjct: 121 SERNQGYGFVEFLSEEDADYAIKIMN-MIKLYGKPIR 156
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos
taurus]
Length = 331
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Saccoglossus kowalevskii]
Length = 220
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRN 75
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
SG L R LR + +KN +
Sbjct: 76 LSG-YELNGRQLRVDNAASEKNKE 98
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 75
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 76 LNG-REFSGRALRVDNAASEKNKE 98
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
SG VY+GNL ++ L D +Q G+V+D + +D+ET + +GF FV + + E A+ +
Sbjct: 2 SGAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEIS 61
Query: 67 IK 68
I+
Sbjct: 62 IQ 63
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S S +V++GN+ +V E L + Q G VV L + D+ET KPKG+ F EY +
Sbjct: 16 SSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEYNDPQ 75
Query: 62 IADYAIKLFSGIVTLYNRTLR 82
A+ AI+ +G L R LR
Sbjct: 76 TAESAIRNLNGY-ELNGRQLR 95
>gi|241951780|ref|XP_002418612.1| RNA binding protein, putative; spliceosome associated protein,
putative [Candida dubliniensis CD36]
gi|223641951|emb|CAX43915.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 259
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+ + N ++Y GN+D +V+E ++Y++ IQ G + + +P+D+ +G+ FVE+++
Sbjct: 9 LDSDRNIEASLYFGNIDPQVTELLMYELFIQFGPIKSINMPKDRILKTHQGYGFVEFKNS 68
Query: 61 EIADYAIKLFSGIVTLYNRTLRF 83
A Y + + G V LY + L+
Sbjct: 69 ADAKYTMDILRG-VRLYGKALKL 90
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + SE L ++ QAG V+ + D+ET KPKG+ F EY+ E A A++
Sbjct: 25 SVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFCEYQDVETAQSAMRN 84
Query: 70 FSGIVTLYN-RTLRFAL-SGQDKNTQNSSMTTT 100
+ YN R LR + +G+ +N SM
Sbjct: 85 LNNYD--YNGRPLRVGVAAGEQSKDENKSMQQA 115
>gi|221060330|ref|XP_002260810.1| spliceosome-associated protein [Plasmodium knowlesi strain H]
gi|193810884|emb|CAQ42782.1| spliceosome-associated protein, putative [Plasmodium knowlesi
strain H]
Length = 514
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD +V E++L+DI G+VV + I R+ E D +G F+ Y++ E +D AI
Sbjct: 161 GANLFIGNLDAEVDEKMLFDIFSSFGQVVTVRIIRN-EDDTSRGHGFISYDNFESSDMAI 219
Query: 68 K 68
+
Sbjct: 220 E 220
>gi|348688369|gb|EGZ28183.1| hypothetical protein PHYSODRAFT_470319 [Phytophthora sojae]
Length = 120
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+G ++ +Y+G LD++V+E+ LY + G + + IP D T + KGF FVE+E E
Sbjct: 1 MAGKADKRA-LYVGGLDKQVTEQGLYTAFVPFGPIKGVQIPMDYSTQRSKGFGFVEFEDE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDK 90
A AI L+ +TLR +++ D+
Sbjct: 60 ADARAAIDNMDE-SELFGKTLRVSIAKPDR 88
>gi|167528145|ref|XP_001748125.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773543|gb|EDQ87182.1| predicted protein [Monosiga brevicollis MX1]
Length = 664
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
SG +Y+GN+D + ++ +L+++ +QAG V++ I + DK F F+EY+ +A
Sbjct: 226 SGNTIYVGNIDPQCTDELLFELGLQAGPVLNAAIAGNPNGDK-LSFGFIEYKRATSTAFA 284
Query: 67 IKLFSGIVTLYNRTL 81
I L G+ L+ RTL
Sbjct: 285 IALLDGL-RLFGRTL 298
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|325972712|ref|YP_004248903.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027950|gb|ADY14709.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 92
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL SE L D+ Q G VV I D+ET +PKGF FVE + + AD AI
Sbjct: 5 IYVGNLSYNTSEEELRDLFAQYGTVVSANIIIDRETRRPKGFGFVEMQEDAAADAAISQL 64
Query: 71 SG 72
G
Sbjct: 65 DG 66
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +V + NL E + D G ++D+Y+P+D+ET +P+G AFV+Y ++ AD A+
Sbjct: 43 GVSVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAV 102
Query: 68 KLFSGIVTLYNRTLRFALSGQDKNTQN 94
G+ R +R ++ Q + +++
Sbjct: 103 D--GGVGDFLGREIRCEIATQQRKSRD 127
>gi|443323178|ref|ZP_21052187.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787088|gb|ELR96812.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 95
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL+ KV++ L D+ + G V ++IP D++T + +GFAFVE E+E D AI
Sbjct: 1 MSIYVGNLNYKVTDSDLNDVFAEYGTVKRVHIPTDRDTGRARGFAFVEMETEAEEDAAIT 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
+N +Y+G L+E V+E +L+ I G + D+ IP D T K +GF FVEYE+ E +
Sbjct: 13 TNKKTTLYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDNTTGKHRGFGFVEYENAEDSA 72
Query: 65 YAIKLFSGIVTLYNRTLR 82
AI LY R LR
Sbjct: 73 DAIDNMHN-AELYGRVLR 89
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|427738497|ref|YP_007058041.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427373538|gb|AFY57494.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +VS+ L ++ + G V + IP D+ET + +GFAFVE ESE + AI+
Sbjct: 1 MSIYVGNLSYEVSQEGLNEVFAEYGTVKRVQIPTDRETGRVRGFAFVEMESEADEEKAIE 60
Query: 69 LFSGIVTLYNRTLR 82
G RTL+
Sbjct: 61 ALDG-AEWMERTLK 73
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|68073863|ref|XP_678846.1| spliceosome-associated protein [Plasmodium berghei strain ANKA]
gi|56499442|emb|CAH97651.1| spliceosome-associated protein, putative [Plasmodium berghei]
Length = 366
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD +V E++L+DI G+V+ + I R+ E D KG F+ Y++ E +D AI
Sbjct: 106 GANLFIGNLDTEVEEKMLFDIFSSFGQVISVKIVRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 68 K 68
+
Sbjct: 165 E 165
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +YI NLD +V E +L ++ +Q G V +++IPRDK G+ FVEYE E +Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYECEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTRLFGKPLRCNKATQDK 100
>gi|341886179|gb|EGT42114.1| CBN-CYN-13 protein [Caenorhabditis brenneri]
Length = 334
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V+E+VL I G VV + IP D ET K +GF FVE++ E A AI
Sbjct: 13 LYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYETGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ +T+R + K T+ S
Sbjct: 73 NE-SELFGKTIRVNFARPPKATERSQ 97
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S S +V++GN+ +V E L + Q G VV L + D++T KPKG+ F EY +
Sbjct: 19 STTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQ 78
Query: 62 IADYAIKLFSGIVTLYNRTLRF-ALSGQDKNT 92
A+ AI+ +G L R LR + +G D++
Sbjct: 79 TAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Monodelphis domestica]
Length = 551
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|297710828|ref|XP_002832064.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Pongo
abelii]
Length = 1051
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++G L+ K E+ L + GR++ +++ +D+ET+K +GFAFV +ES A A +
Sbjct: 10 LFVGGLNLKTDEKALKAEFGKYGRIIKVFLMKDRETNKSRGFAFVTFESPADAKAAARDM 69
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
+G L ++++ A + + + + TP SS +SR
Sbjct: 70 NGKC-LDGKSIKVAQAIKQAFKNSRWVPPTPGSSGRSR 106
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+Y+GNL +E+ + ++ Q G V ++ +P D++T +P+GFAFV +++E D AIK
Sbjct: 3 TKMYVGNLAWSATEQDVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIK 62
Query: 69 LFSGI 73
+G+
Sbjct: 63 GLNGL 67
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|412988957|emb|CCO15548.1| predicted protein [Bathycoccus prasinos]
Length = 247
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYAI 67
NV++GNLD ++ E++LYD G V+ + RD E+ + +GF FV+++S E +D AI
Sbjct: 44 ANVFVGNLDAEIDEKMLYDTFSAFGSVITAPKVQRDPESGESRGFGFVQFDSFEASDRAI 103
Query: 68 KLFSG 72
+ G
Sbjct: 104 EAMHG 108
>gi|389585768|dbj|GAB68498.1| spliceosome-associated protein 49, partial [Plasmodium cynomolgi
strain B]
Length = 229
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD +V E++L+DI G+VV + I R+ E D KG F+ Y++ E +D AI
Sbjct: 106 GANLFIGNLDAEVDEKMLFDIFSSFGQVVTVRIIRN-EDDTSKGHGFISYDNFESSDMAI 164
Query: 68 K 68
+
Sbjct: 165 E 165
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +YI NLD +V E +L ++ +Q G V +++IPRDK G+ FVEYE E +Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHAGYGFVEYEYEYECEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDKNT 92
A K+ + + L+ + LR + QDK T
Sbjct: 77 AGKVLN-MTKLFGKPLRCNKASQDKRT 102
>gi|339247117|ref|XP_003375192.1| eukaryotic translation initiation factor 3 subunit G [Trichinella
spiralis]
gi|316971502|gb|EFV55261.1| eukaryotic translation initiation factor 3 subunit G [Trichinella
spiralis]
Length = 297
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
V + NL E +S+ VL ++ Q G+VV LY+ RDK T + KG+AFV Y S A AI
Sbjct: 207 TVRVTNLPEDISDVVLKELFSQVGKVVRLYLARDKVTQRCKGYAFVSYMSRADAQKAIDE 266
Query: 70 FSG 72
SG
Sbjct: 267 LSG 269
>gi|84999346|ref|XP_954394.1| rna-binding protein [Theileria annulata]
gi|65305392|emb|CAI73717.1| rna-binding protein, putative [Theileria annulata]
Length = 84
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
++I + + V +L+ Q G + DL IP+DK TDK +G AFVEYE EE A +AI
Sbjct: 7 IFIRGIADDVDSNLLFSAFSQFGHITDLNIPKDKFTDKNRGIAFVEYEDEEDAKHAI 63
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
++Y+G+LD+ V++ LYD+ Q G+VV + + RD T + G+ +V Y +++ A AI +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNS 95
+ L N+T+R ++S +D + S
Sbjct: 101 LN-FTPLNNKTIRVSVSRRDPTDRKS 125
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
N++I NLD+ + + L++ G ++ I D + + KG+ FV+Y+SEE A AI
Sbjct: 129 NIFIKNLDKSIDIKALHETFSSFGTIISCKIATDA-SGQSKGYGFVQYDSEEAAQTAIDK 187
Query: 70 FSGIV 74
+G++
Sbjct: 188 LNGML 192
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Xenopus (Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|443328242|ref|ZP_21056842.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442792088|gb|ELS01575.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 92
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL ++++ L ++ + G V ++IP D+ET + +GFAFVE ESE D AI
Sbjct: 3 IYVGNLAYEINQEDLNEVFAEYGTVKRVHIPTDRETGRVRGFAFVEMESESDEDKAIAAL 62
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNS 95
G R+L+ + +N +NS
Sbjct: 63 DG-AEWMERSLKVNKARPRENNRNS 86
>gi|422295618|gb|EKU22917.1| u2 snrnp component ist3 [Nannochloropsis gaditana CCMP526]
Length = 121
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
G V++G+L ++SE + ++ Q G + DL++ RDK T K KGFAF++YE +
Sbjct: 28 GQYKDSAWVFVGSLPSQLSEGDVLCVMSQWGEIEDLHLVRDKGTGKSKGFAFLKYEDQRS 87
Query: 63 ADYAIKLFSGIVTLYNRTLR 82
A+ +GI L RTLR
Sbjct: 88 TILAVDNMNGI-KLLERTLR 106
>gi|443322691|ref|ZP_21051708.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442787558|gb|ELR97274.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 96
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL V + L ++ + G V ++IP ++ET +P+GFAFVE ESE AI
Sbjct: 1 MSIYVGNLSYDVKQEELAEVFAEYGTVKRVHIPLERETSRPRGFAFVEMESESQETAAIG 60
Query: 69 LFSGIVTLYNRTLR 82
G Y R L+
Sbjct: 61 ALDG-AEWYGRELK 73
>gi|294942558|ref|XP_002783584.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
gi|239896081|gb|EER15380.1| RNA-binding motif protein, X-linked, putative [Perkinsus marinus
ATCC 50983]
Length = 191
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLD ++E L + Q G ++D+ + RDKET K KGF F+ YE + YAI
Sbjct: 41 LYIGNLDRGLTEGDLITVFSQFGEILDVNLVRDKETGKSKGFGFLAYEDQRSTRYAIDNM 100
Query: 71 SGIVTLYNRTLR 82
G L R L+
Sbjct: 101 IGF-NLVGRPLK 111
>gi|387593844|gb|EIJ88868.1| hypothetical protein NEQG_00687 [Nematocida parisii ERTm3]
gi|387595148|gb|EIJ92774.1| hypothetical protein NEPG_02465 [Nematocida parisii ERTm1]
Length = 211
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N GC V++GN+D + E + + L GRV+ + D+ T K KG+ F YES +AD
Sbjct: 3 NRGCTVFVGNIDFTIPEETIVEELSSVGRVISFRMVTDRATGKSKGYGFCTYESPIVADI 62
Query: 66 AIKLFSGIVTLYNRTLRF 83
A+ + L NR ++
Sbjct: 63 AVNRLK--IMLNNRPVKI 78
>gi|395329951|gb|EJF62336.1| hypothetical protein DICSQDRAFT_104771 [Dichomitus squalens
LYAD-421 SS1]
Length = 311
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++G L ++E + I Q G ++D+ +PRDKET K KGFAF+ YE + A+
Sbjct: 33 IFVGGLHRDLTEGDVITIFSQYGEIMDINLPRDKETGKQKGFAFLMYEDQRSTILAVDNL 92
Query: 71 SGIVTLYNRTLRF 83
+G L +RTLR
Sbjct: 93 NGAQVL-DRTLRV 104
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S S +V++GN+ +V E L + Q G VV L + D++T KPKG+ F EY +
Sbjct: 19 STTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQ 78
Query: 62 IADYAIKLFSGIVTLYNRTLRF-ALSGQDKNT 92
A+ AI+ +G L R LR + +G D++
Sbjct: 79 TAESAIRNLNGF-ELNGRPLRVDSAAGGDRSA 109
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Xenopus laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|70948340|ref|XP_743694.1| spliceosome-associated protein [Plasmodium chabaudi chabaudi]
gi|56523315|emb|CAH77774.1| spliceosome-associated protein, putative [Plasmodium chabaudi
chabaudi]
Length = 394
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD +V E++L+DI G+V+ + I R+ E D KG F+ Y++ E +D AI
Sbjct: 106 GANLFIGNLDTEVEEKMLFDIFSSFGQVISVKIVRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 68 K 68
+
Sbjct: 165 E 165
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +YI NLD +V E +L ++ +Q G V +++IPRDK G+ FVEYE E +Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYECEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTRLFGKPLRCNKATQDK 100
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V+E L + + G V + IP D+ET +P+GFAFVE + E D AI+
Sbjct: 1 MSIYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IGNL VSE +++ + G V + +P+D ++ +PKGF +VE+ ++E A AI
Sbjct: 314 LFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAM 373
Query: 71 SGIVTLYNRTLRFALS 86
+G L R LR S
Sbjct: 374 TG-QELAGRPLRLDFS 388
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQN 94
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEE 100
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Cricetulus griseus]
Length = 645
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|170594273|ref|XP_001901888.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
gi|158590832|gb|EDP29447.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
Length = 316
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V+E++L I G +V + IP D ET K +GF FVEYE E A AI
Sbjct: 15 LYVGGFGEEVNEKILQAGFIPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 71 SGIVTLYNRTLR 82
+ L+ RT+R
Sbjct: 75 ND-SELFGRTIR 85
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N +YIG+++ V+E + I Q GRV+ ++ ++ +T K KGF FV++E ++ AD
Sbjct: 766 NEASRIYIGSINWNVTEDQVRSIFSQFGRVISCFLMQNADTGKHKGFGFVDFELKKSADD 825
Query: 66 AIKLFSGIVTLYNRTLR 82
AI +G L R+++
Sbjct: 826 AIATMNGF-ELLGRSIK 841
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G+L ++E V+ G + L + +D + K KG+AF+EY+++E A A++
Sbjct: 590 IYVGSLHFSLTEDVIRATFSVFGNIKSLALGKD-ASGKSKGYAFIEYDNQESAAKALQSM 648
Query: 71 SGIVTLYNRTLRFA 84
+ V + R ++ A
Sbjct: 649 TNYV-MCGRAIKVA 661
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ ++E + DI AG VV+ + D+ET +PKGF F EY + A A++
Sbjct: 9 SVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 68
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSMTTTP 101
+ + NR LR S +NS+ T P
Sbjct: 69 LND-YEIMNRKLRVDFSNDGGEEENSAPTYQP 99
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ ++E + DI AG VV+ + D+ET +PKGF F EY + A A++
Sbjct: 9 SVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 68
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSMTTTP 101
+ + NR LR S +NS+ T P
Sbjct: 69 LND-YEIMNRKLRVDFSNDGGEEENSAPTYQP 99
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|353230162|emb|CCD76333.1| putative nucleotide binding protein 2 (nbp 2) [Schistosoma mansoni]
Length = 264
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GN++ +++ +LY++ +QAG + + + K+T FAFV +E EE YA LF
Sbjct: 7 IYVGNINPRITADILYELFLQAGPLEGVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSR---KSRSDP 111
GI TLY LR Q+ Q+ + + P S+ + R DP
Sbjct: 59 EGI-TLYGTELRIR-PRQNSKFQDLKIRSVPPSAYQFFRPRVDP 100
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|124808629|ref|XP_001348367.1| spliceosome-associated protein, putative [Plasmodium falciparum
3D7]
gi|23497260|gb|AAN36806.1|AE014819_17 spliceosome-associated protein, putative [Plasmodium falciparum
3D7]
Length = 484
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD++V E++L+DI G+++ + + R+ E D KG F+ Y++ E +D AI
Sbjct: 106 GANLFIGNLDDEVDEKMLFDIFSSFGQIMTVKVMRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 68 K 68
+
Sbjct: 165 E 165
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +YI NLD +V E +L ++ +Q G V +++IPRDK G+ FVEYE E +Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGYHAGYGFVEYEYEYECEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A + + + L+ + LR + QDK
Sbjct: 77 AANILN-MTKLFGKALRCNKATQDK 100
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGNL ++E + I+ Q G V+D+ +PRDK+T K +GF F+ YE + A+
Sbjct: 31 VYIGNLPRDLTEGDVITIMSQYGEVMDVNLPRDKQTGKIRGFGFLMYEDQRSTVLAVDNL 90
Query: 71 SGIVTLYNRTLRF 83
+G L +RT+R
Sbjct: 91 NGAKVL-DRTIRV 102
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N S +V++GN+ V+E + + +AG V+ + + D+ET KPKG+ F+E+ + A
Sbjct: 12 NERSQRSVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTA 71
Query: 64 DYAIKLFSGIVTLYNRTLR 82
D AI++ +G L R LR
Sbjct: 72 DTAIRVLNG-HELGGRILR 89
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus
cantonensis]
Length = 97
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+GN+ + +E + + QAGRV ++ I D+ET +PKGF F E+ E A A+
Sbjct: 20 VYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDEAGAQNAVNTL 79
Query: 71 SGIVTLYN-RTLR 82
+G T +N R+LR
Sbjct: 80 NG--TDFNGRSLR 90
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 25 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 84
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 85 LNG-REFSGRALRVDNAASEKNKE 107
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 25 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 84
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 85 LNG-REFSGRALRVDNAASEKNKE 107
>gi|66827787|ref|XP_647248.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997530|sp|Q55GD6.1|SF3B4_DICDI RecName: Full=Splicing factor 3B subunit 4
gi|60475375|gb|EAL73310.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 359
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N + I +LD V+E +L ++ IQA VV ++IP+DK T + G A+VE++S A+Y
Sbjct: 10 NHEACLLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDAEY 69
Query: 66 AIKL 69
A+K+
Sbjct: 70 ALKV 73
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPR--DKETDKPKGFAFVEYESEEIADY 65
G N++IGNLD V ER+L+D + G ++ + P+ E KGFAF+ ++S E +D
Sbjct: 97 GANLFIGNLDADVDERILHDTFSRFGTII--FTPKVMRDENGVSKGFAFINFDSFEASDA 154
Query: 66 AIK 68
AI+
Sbjct: 155 AIE 157
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|156045437|ref|XP_001589274.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980]
gi|154694302|gb|EDN94040.1| hypothetical protein SS1G_09907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 321
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ ++E + DI AG V++ + D+ET +PKGF F EY + A A++
Sbjct: 8 SVFVGNIPYGLTEEQIVDIFSSAGNVINFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 67
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSMTTTP 101
+ + NR LR S +NS+ T P
Sbjct: 68 LND-YEIMNRKLRVDFSNDGGEEENSAPTYQP 98
>gi|169774677|ref|XP_001821806.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus oryzae
RIB40]
gi|238496735|ref|XP_002379603.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|83769669|dbj|BAE59804.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694483|gb|EED50827.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|391869782|gb|EIT78975.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus oryzae
3.042]
Length = 153
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKP------KGFAF 54
MS + C VY+G LD+ V+ + L + + G VVD+ +P+ D P +GF +
Sbjct: 1 MSEAARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPK---PDVPNSNELHRGFGY 57
Query: 55 VEYESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRK 106
VE+E E A AI G LY RT++ A + K++ + T + ++
Sbjct: 58 VEFEVPEDAKEAIDNMDG-SELYGRTIKVAAAKPQKDSNEGLGSKTAIWEQE 108
>gi|425440323|ref|ZP_18820628.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
gi|389719274|emb|CCH96866.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9717]
Length = 97
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++++GNL ++S+ L D+ + G+V ++IP DKET + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKETQRKRGFAFVEMESKAQEAAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L +I + G V+ + + D+ET KPKG+ F EY+ +E A A++
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 71 SGIVTLYNRTLR 82
+G V R LR
Sbjct: 78 NGYV-FGGRPLR 88
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
S C+V++GN+ +E L I + G VV+ + D+ET KPKG+ F E++ +E A A
Sbjct: 16 SACSVFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAMSA 75
Query: 67 IKLFSGIVTLYNRTLRFALSGQDKNTQ 93
++ + + R LR + ++N +
Sbjct: 76 MRNLNSF-EIGGRALRVDHAASERNKE 101
>gi|443697196|gb|ELT97731.1| hypothetical protein CAPTEDRAFT_180028 [Capitella teleta]
Length = 205
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNL + ++E +LY++ +QAG + + IP++ + + K F F+E+ E YAI+L
Sbjct: 9 IWCGNLPDDITEELLYELFLQAGPLCKVNIPKES-SGRLKRFGFIEFRHSESVPYAIELM 67
Query: 71 SGIVTLYNRTLRF 83
+GI L++ +L+
Sbjct: 68 NGI-KLFDCSLQL 79
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|312066701|ref|XP_003136395.1| cytosolic cyclophilin [Loa loa]
gi|307768442|gb|EFO27676.1| cytosolic cyclophilin [Loa loa]
Length = 322
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V+E+VL + G +V + IP D ET K +GF FVEYE E A AI
Sbjct: 15 LYVGGFGEEVNEKVLQAGFVPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 71 SGIVTLYNRTLR 82
+ L+ RT+R
Sbjct: 75 ND-SELFGRTIR 85
>gi|156081724|ref|XP_001608355.1| mRNA processing protein [Plasmodium vivax Sal-1]
gi|148800926|gb|EDL42331.1| mRNA processing protein, putative [Plasmodium vivax]
Length = 721
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S S +++IGN+ V+ER L++IL + G+VV + I D + + KGFAF EY+ E
Sbjct: 3 SKSNYSLWIGNIPFDVTERELHEILSKVGQVVSVRIKYDVDKNISKGFAFCEYKDLETCM 62
Query: 65 YAIKLFSGIVTLYNRTLRF 83
A+K +G L R LR
Sbjct: 63 LALKYINGY-ELKGRKLRL 80
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S SG ++Y+GN + +E+ + D G V ++ I D+ET +P+GFAFVE+ ++ A+
Sbjct: 2 SGSGFSIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAE 61
Query: 65 YAIKLFSG 72
A+ +G
Sbjct: 62 RAVNELNG 69
>gi|320168617|gb|EFW45516.1| hypothetical protein CAOG_03500 [Capsaspora owczarzaki ATCC
30864]
Length = 385
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
+S C V++GN+ V+E+ + D+ Q G V+ + D++T KPKGF F EY E A
Sbjct: 3 DSKC-VFVGNISYDVTEQEVIDLCSQVGPVISFRLVFDRDTGKPKGFGFCEYTDAETAQS 61
Query: 66 AIKLFSGIVTLYNRTLRFALSGQD 89
AI+ + + L R +R + D
Sbjct: 62 AIRNLNDL-ELKGRRIRVDFAESD 84
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 30 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 89
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 90 LNG-REFSGRALRVDNAASEKNKE 112
>gi|70952960|ref|XP_745612.1| mRNA processing protein [Plasmodium chabaudi chabaudi]
gi|56525991|emb|CAH82321.1| mRNA processing protein, putative [Plasmodium chabaudi chabaudi]
Length = 694
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S S C+++IGN+ +SE+ L +IL + G VV + I D + + KGFAF EY+ E
Sbjct: 3 SKSNCSLWIGNIPFDLSEKELQEILSRVGEVVSVRIKYDIDKNVSKGFAFCEYKDLETCM 62
Query: 65 YAIKLFSG 72
A+K +G
Sbjct: 63 LALKYLNG 70
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+++G + ++ SE + +Q GRV+D + DKET +P+GF FV +++E D A++
Sbjct: 244 IFVGGVSQEASEEEFKNFFMQFGRVIDSTLMIDKETGRPRGFGFVTFDNEAAVDLALQ 301
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG L K E+ L + GR++++++ +D+ET+K +GFAF+ +ES A+ A +
Sbjct: 10 LFIGGLSLKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESPADANAAARDM 69
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
+G L + ++ AL+ + + + TP S +SR
Sbjct: 70 NGKY-LDGKAIKVALAIKPAFKSSRWVPPTPGSGGRSR 106
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|374316448|ref|YP_005062876.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359352092|gb|AEV29866.1| RRM domain-containing RNA-binding protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 92
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GN+ SE L D+ Q G V+ I D+ET +PKGF FVE E + AD AI
Sbjct: 5 IYVGNMSYNTSEEELRDLFSQYGTVLSASIIIDRETRRPKGFGFVEMEEDSAADAAISQL 64
Query: 71 SGIVTLYNRTLR 82
G L R LR
Sbjct: 65 DG-KDLGGRNLR 75
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++YIGNL +V++ L + + G+V + +P D+ET +P+GFAFVE SE+ + AI+
Sbjct: 1 MSIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|67923998|ref|ZP_00517451.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416401054|ref|ZP_11687154.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67854173|gb|EAM49479.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357262154|gb|EHJ11338.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 81
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V E L ++ + G V +++P DKET +P+GFAFVE E++ AI+
Sbjct: 1 MSIYVGNLSYEVKEEDLNEVFAEYGTVKRVHVPTDKETGRPRGFAFVELETKAEESSAIE 60
Query: 69 LFSGIVTLYNRTLR 82
G RT++
Sbjct: 61 TLDG-AEWMGRTMK 73
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis
davidii]
Length = 641
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++G L +SE + I Q G ++D+ +PRDKET K KGF FV YE + A+
Sbjct: 34 VFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 71 SGIVTLYNRTLRF 83
+G L RTLR
Sbjct: 94 NGAKVL-ERTLRV 105
>gi|330836185|ref|YP_004410826.1| RNP-1 like RNA-binding protein [Sphaerochaeta coccoides DSM
17374]
gi|329748088|gb|AEC01444.1| RNP-1 like RNA-binding protein [Sphaerochaeta coccoides DSM
17374]
Length = 91
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GN++ + +E L D+ Q G V I D+ET +PKGFAFVE E + AD AI
Sbjct: 5 IYVGNMNYRTTEDQLRDLFAQYGTVSSANIIIDRETHRPKGFAFVEMEDDGAADAAISQL 64
Query: 71 SG 72
G
Sbjct: 65 DG 66
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca
mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca
mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca
mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca
mulatta]
Length = 620
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Pongo abelii]
Length = 625
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 51 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 110
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 111 LNG-REFSGRALRVDNAASEKNKE 133
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Felis catus]
Length = 613
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|391341478|ref|XP_003745057.1| PREDICTED: uncharacterized protein LOC100899567 [Metaseiulus
occidentalis]
Length = 357
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEYESEEIADYAI 67
V+IGN++++V+E L I + G+VVD +K + P+GFAF+ YE+EE A+ AI
Sbjct: 28 VWIGNIEKRVTECTLLKIFSKHGKVVDFDFLINKTGPQKGLPRGFAFITYENEEQAETAI 87
Query: 68 KLFSGIVTLYNRTLRFALSGQ-DKNTQNSSMTTTPLSS 104
+ +G+ L R L + + + + Q + TP+++
Sbjct: 88 RSLNGL-QLQGRRLSVSFAQEMPQPEQKAKKEVTPVAA 124
>gi|256082240|ref|XP_002577367.1| nucleotide binding protein 2 (nbp 2) [Schistosoma mansoni]
Length = 450
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GN++ +++ +LY++ +QAG + + + K+T FAFV +E EE YA LF
Sbjct: 7 IYVGNINPRITADILYELFLQAGPLEGVTV---KDT-----FAFVTFEDEESVPYACSLF 58
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSR---KSRSDP 111
GI TLY LR Q+ Q+ + + P S+ + R DP
Sbjct: 59 EGI-TLYGTELRIR-PRQNSKFQDLKIRSVPPSAYQFFRPRVDP 100
>gi|452822647|gb|EME29664.1| RNA-binding protein [Galdieria sulphuraria]
Length = 187
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL +++E L + Q G + D+++ RD++T K KGFAF+ YE + A+ F
Sbjct: 37 IFVGNLPFELTEGDLLVVFEQYGHIADVHLVRDQDTGKSKGFAFIGYEDQRSTILAVDNF 96
Query: 71 SGIVTLYNRTLR 82
+G V L RTLR
Sbjct: 97 NGTVLL-GRTLR 107
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant;
AltName: Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Papio anubis]
Length = 620
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 7 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 66
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 67 LNG-REFSGRALRVDNAASEKNKE 89
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|82914993|ref|XP_728927.1| splicing factor 3b subunit 4 [Plasmodium yoelii yoelii 17XNL]
gi|23485610|gb|EAA20492.1| splicing factor 3b subunit 4 [Plasmodium yoelii yoelii]
Length = 415
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N++IGNLD +V E++L+DI G+V+ + + R+ E D KG F+ Y++ E +D AI
Sbjct: 106 GANLFIGNLDTEVEEKMLFDIFSSFGQVISVKVVRN-EDDTSKGHGFISYDNFESSDLAI 164
Query: 68 K 68
+
Sbjct: 165 E 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N+ +YI NLD +V E +L ++ +Q G V +++IPRDK G+ FVEYE E +Y
Sbjct: 17 NNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGFHLGYGFVEYEYEYECEY 76
Query: 66 AIKLFSGIVTLYNRTLRFALSGQDK 90
A K+ + + L+ + LR + QDK
Sbjct: 77 AGKVLN-MTRLFGKPLRCNKATQDK 100
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|119490270|ref|ZP_01622783.1| RNA binding protein [Lyngbya sp. PCC 8106]
gi|119454156|gb|EAW35309.1| RNA binding protein [Lyngbya sp. PCC 8106]
Length = 105
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+VYIGNL VSE L + + G V + IP D+ET +P+GFAFVE +S+ + AI+
Sbjct: 1 MSVYIGNLSYDVSEEDLKSVFAEYGTVRRVQIPTDRETGRPRGFAFVEMDSDSEEEAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|326481712|gb|EGE05722.1| splicing factor 3b subunit 4 [Trichophyton equinum CBS 127.97]
Length = 347
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 29 LIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVTLYNRTLRFALSGQ 88
++QAGR+V++++P+D+ T +G+ FVE+ SEE A+YA ++ + V LY + +R +
Sbjct: 1 MLQAGRIVNVHLPKDRVTQTHQGYGFVEFNSEEDAEYASRIMN-QVRLYGKPIRVNKASA 59
Query: 89 DKN 91
DK
Sbjct: 60 DKQ 62
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYA 66
G +++GNLD V+E+VLYD + G ++ L + RD +++ KG+ F+ + + E +D A
Sbjct: 68 GAELFVGNLDPMVTEQVLYDTFSRFGSLISLPKVARD-DSNLSKGYGFISFSNFEASDDA 126
Query: 67 IKLFSG 72
I +G
Sbjct: 127 IANMNG 132
>gi|255725032|ref|XP_002547445.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
gi|240135336|gb|EER34890.1| hypothetical protein CTRG_01752 [Candida tropicalis MYA-3404]
Length = 257
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
NS ++Y GN+D + E ++Y++ IQ G + L +P+D+ +G+ FVE+ + + A Y
Sbjct: 14 NSNASLYFGNIDPQADEILMYELFIQFGPIKSLNMPKDRILKTHQGYGFVEFRNIDDAKY 73
Query: 66 AIKLFSGIVTLYNRTLRF 83
+ + G V L+ + L+
Sbjct: 74 TLDILRG-VRLFGKALKL 90
>gi|281207156|gb|EFA81339.1| hypothetical protein PPL_05322 [Polysphondylium pallidum PN500]
Length = 1665
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 10 NVY---IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
NVY +GN+ +E+ L DI + GRVV + D++T KPKG+ F EY +E A A
Sbjct: 2 NVYGGLVGNIPYDATEKELIDIFSEVGRVVSFRMVEDRDTKKPKGYGFCEYLDQETAQSA 61
Query: 67 IKLFSGIVTLYNRTLRFALSGQDK 90
I+ + L R LR + + +K
Sbjct: 62 IRNLNN-RELNKRNLRVSYADNEK 84
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|119488026|ref|ZP_01621470.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119455315|gb|EAW36454.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V+E L + + G V + IP D+ET +P+GFAFVE +E D AI+
Sbjct: 1 MSIYVGNLAYEVTEEDLKSVFAEYGAVQRVSIPTDRETGRPRGFAFVEMGAESEEDAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|221054940|ref|XP_002258609.1| mrna processing protein [Plasmodium knowlesi strain H]
gi|193808678|emb|CAQ39381.1| mrna processing protein, putative [Plasmodium knowlesi strain H]
Length = 820
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S S +++IGN+ V+ER L D+L + G VV + I D E + KGFAF EY+ E
Sbjct: 3 SKSNYSLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLETCM 62
Query: 65 YAIKLFSGIVTLYNRTLRFALSGQD 89
A+K +G L R LR + ++
Sbjct: 63 LALKYING-YELKGRKLRLYWANEE 86
>gi|449299689|gb|EMC95702.1| hypothetical protein BAUCODRAFT_34465 [Baudoinia compniacensis
UAMH 10762]
Length = 337
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ G V+IGN+ VSE + +I + G VV + DKET+KPKGF F+EY
Sbjct: 1 MAQREKGGRVVFIGNIPYGVSEEQICEIFGRVGNVVSFRLVYDKETNKPKGFGFLEYTDV 60
Query: 61 EIADYAIKLFSGIVTLYNRTLR 82
+ A A++ + + RTLR
Sbjct: 61 DAAASAVRNLNEFEVM-GRTLR 81
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +Y+GNL + L AG V ++ +P D+ET +P+GFAFV S + A+ AI
Sbjct: 2 GNRLYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGSAQAANSAI 61
Query: 68 KLFSGIVTLYNRTLR 82
+G V L R L+
Sbjct: 62 SQLNGAV-LDGRALK 75
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
N++I NLDE++ + L+D + G V+ + D E + KG+ FV YE+ E A+ AIK
Sbjct: 134 NIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATD-EQGRSKGYGFVHYETAEAAETAIKA 192
Query: 70 FSGIV 74
+G++
Sbjct: 193 VNGML 197
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
N+YI NLD +V++ ++ + G V + D E + KGF FV YES E A A+
Sbjct: 227 NLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDE-GRSKGFGFVNYESHEEAQAAV 283
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY 57
+S ++Y+G LD V+E ++++I G V + + RD T + G+A+V Y
Sbjct: 40 SSAPSASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNY 93
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|156377813|ref|XP_001630840.1| predicted protein [Nematostella vectensis]
gi|156217869|gb|EDO38777.1| predicted protein [Nematostella vectensis]
Length = 298
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
Y+G L E+V E+VL+ I G + D+ IP D T K +GF FVE+E E AI
Sbjct: 7 AYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNM 66
Query: 71 SGIVTLYNRTLRFALS 86
+ L+ RT+R L+
Sbjct: 67 NE-SELFGRTIRVNLA 81
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|297304609|ref|XP_001102988.2| PREDICTED: RNA-binding motif protein, X-linked-like-3-like
[Macaca mulatta]
Length = 789
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+++G L+ K E+ L ++ GR++++++ +D+ET+K +GFAFV +ES A A +
Sbjct: 9 KLFVGGLNLKTEEKALKAEFVKYGRIINVFLMKDRETNKSRGFAFVTFESPADAKAAARD 68
Query: 70 FSG 72
+G
Sbjct: 69 LNG 71
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +Y+GNL + L AG V ++ +P D+ET +P+GFAFV + + A+ AI
Sbjct: 2 GNRLYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGTAQAANSAI 61
Query: 68 KLFSGIVTLYNRTLR 82
+G + L RTL+
Sbjct: 62 SQLNGAM-LDGRTLK 75
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|121715928|ref|XP_001275573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
gi|119403730|gb|EAW14147.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
Length = 152
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 57
MS + C VY+G LD+ V+ + L + + G VVD+ +P+ TD +GF +VE+
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSTDLHRGFGYVEF 60
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
+ + A AI G LY RT++ A + K +
Sbjct: 61 DLPQDAAEAIDNMDG-SELYGRTIKVAAAKPQKES 94
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 28 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 87
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 88 LNG-REFSGRALRVDNAASEKNKE 110
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant;
AltName: Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI AG VV + D+E+ KPKG+ F E++ +E A A++
Sbjct: 14 SVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMRN 73
Query: 70 FSGIVTLYNRTLRF--ALSGQDKN 91
SG L R+LR A S +DK+
Sbjct: 74 LSG-YELNGRSLRVDSAASEKDKD 96
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 29 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 88
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 89 LNG-REFSGRALRVDNAASEKNKE 111
>gi|86608306|ref|YP_477068.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556848|gb|ABD01805.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 175
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL E+V + L + AG V+ + RD++T K +GF FV +EE A I+ F
Sbjct: 5 LYVGNLPEEVDRQALEKLFRSAGEVISTKVIRDRKTGKCRGFGFVTVNTEEQAQQYIEKF 64
Query: 71 SGIVTLYNRTLRFALSG-QDKNTQNSSMT-TTPLSSRKSR 108
+G + + LR L+ +D+ + S T T+ SS++SR
Sbjct: 65 NGH-SFGDVNLRIELAQPRDRGEEGESKTATSEPSSKESR 103
>gi|387219601|gb|AFJ69509.1| hypothetical protein NGATSA_3028200 [Nannochloropsis gaditana
CCMP526]
Length = 134
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VY+G LDE+ +E +L+ I G +V++ IP+D + + +GF FV +ES E A AI
Sbjct: 14 VYVGGLDEQCTEEMLHAAFIPFGDIVEVNIPKDFKENTTRGFGFVHFESAEDAAAAIDNM 73
Query: 71 SGIVTLYNRTLR 82
G L R L+
Sbjct: 74 EG-AELLGRVLK 84
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+VY+GNL KV+E L + + G+VV + +P+D+ET + +GFAFVE SE AI
Sbjct: 1 MSVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAID 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|308482576|ref|XP_003103491.1| CRE-CYN-13 protein [Caenorhabditis remanei]
gi|308259912|gb|EFP03865.1| CRE-CYN-13 protein [Caenorhabditis remanei]
Length = 337
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V+E+VL I G VV + IP D E+ K +GF FVE++ E A AI
Sbjct: 13 LYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ +T+R + K T+ S
Sbjct: 73 NE-SELFGKTIRVNFARPPKATERSQ 97
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|427780483|gb|JAA55693.1| Putative splicing factor 3b subunit 4 [Rhipicephalus pulchellus]
Length = 248
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLD KV+E +L ++ +QAG V D+ IP+D + K FAFV + E Y + L
Sbjct: 10 LWCGNLDPKVTEELLRELFVQAGPVEDVKIPKDN-NGRSKNFAFVTFVHSESVGYTLALM 68
Query: 71 SGIVTLY 77
G V+LY
Sbjct: 69 DG-VSLY 74
>gi|4263832|gb|AAD15475.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 314
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 8 GCNVYIGNLDE-KVSERVLYDILIQAGRVVD-LYIPRDKETDKPKGFAFVEYESEEIADY 65
G N+++GNLD V E++L+D G + D I RD +T P+GF F+ Y+S E +D
Sbjct: 83 GANLFLGNLDPVNVDEKMLHDTFSAFGVISDHPKIMRDPDTGNPRGFGFISYDSFEASDA 142
Query: 66 AIKLFSGIVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISH 123
AI+ +G L NR T+ +A K ++ + L++ RS P + G +H
Sbjct: 143 AIEAMTG-QYLSNRQITVTYAYKKDTKGERHGTPEERLLAANSQRSRPHKLFATGPS-TH 200
Query: 124 HSMRISGTR 132
++ +++G +
Sbjct: 201 NAPKVNGLQ 209
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 52 FAFVEYESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
F FV++ +EE ADYAIK+F+ ++ LY +R + QDK +
Sbjct: 40 FGFVQFHNEEDADYAIKVFN-MIKLYGEPIRVKKASQDKKS 79
>gi|425466928|ref|ZP_18846222.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|389830427|emb|CCI27639.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 97
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++++GNL ++S+ L D+ + G+V ++IP DKET + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGKVQRVHIPVDKETGRKRGFAFVEMESKAQETTAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 647
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus
glaber]
Length = 597
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL V++ L ++ G+V +Y+P D ET K +GF FVE E++E D AI+
Sbjct: 1 MSIYVGNLSYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 TLDG 64
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[Mustela putorius furo]
Length = 582
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 10 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 70 LNG-REFSGRALRVDNAASEKNKE 92
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
SG + + NV++GNL +E ++ L Q G V + I D+ET +P+GF + E+E
Sbjct: 275 QSGEAATDGNVFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCEFEDA 334
Query: 61 EIADYAIKLFSGIVTLYNRTLRF 83
+ A+ AI SG V + R +R
Sbjct: 335 DTANKAIAA-SGTVDVDGRQIRI 356
>gi|395527150|ref|XP_003765714.1| PREDICTED: putative RNA-binding protein 11 [Sarcophilus harrisii]
Length = 250
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 16/85 (18%)
Query: 11 VYIGNLDEKVSERVLYDILIQ--------------AGRVVDLYIPRDKETDKPKGFAFVE 56
V++GNL+ +V E +LY++ +Q AG + + I +DKE KPK F FV
Sbjct: 13 VFVGNLETRVREEILYELFLQPQELRAQESVCSLQAGPLTRVTICKDKE-GKPKPFGFVC 71
Query: 57 YESEEIADYAIKLFSGIVTLYNRTL 81
++ +E YAI L +GI LY R +
Sbjct: 72 FKHQESVSYAIALLNGI-RLYGRPI 95
>gi|225712646|gb|ACO12169.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 142
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
N C VY+GNL + S+ L D+ + G+V +++ R+ P GFAFVE+E E A+
Sbjct: 9 NYNCKVYVGNLGDNASKHELEDVFRRYGKVRSVWVARN-----PPGFAFVEFEDERDAED 63
Query: 66 AIKLFSG 72
A K G
Sbjct: 64 ASKALDG 70
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IGNL +SE +++ + G V + +P+D ++ +PKGF +VE+ ++E A AI
Sbjct: 304 LFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAM 363
Query: 71 SGIVTLYNRTLRFALS 86
+G L R LR S
Sbjct: 364 TG-QELAGRPLRLDFS 378
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ V+E +L +I +AG VV+ + D+ET KPKG+ F EY A A++
Sbjct: 14 SVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMRN 73
Query: 70 FSGIVTLYNRTLRFALS-GQDKN 91
+G + R LR + G DK+
Sbjct: 74 LNG-YEINGRNLRVDFADGGDKS 95
>gi|75908205|ref|YP_322501.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|75701930|gb|ABA21606.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 109
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++YIGNL +V+E L + G+V + +P D+ET +P+GFAFVE E+E AI+
Sbjct: 1 MSIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GNL +++ L ++ G + ++P D+ET P+GFA++++++E+ A+ A KL
Sbjct: 402 SVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKATKL 461
Query: 70 FSGIVTLYNRTLR 82
SG L R +R
Sbjct: 462 -SG-TDLEGRQIR 472
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
+V++GNL +++ L I G + + +P D E+ K KGFAF+++ E+ A+ A+
Sbjct: 295 SVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADEDSAEKAV 352
>gi|443328827|ref|ZP_21057420.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442791563|gb|ELS01057.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 95
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++YIGNL +V++ L ++ + G V +++P D+ET + +GFAFVE ESE D AI
Sbjct: 1 MSIYIGNLSYEVNQEDLNEVFTEYGTVKRVHVPTDRETGRVRGFAFVEMESEADEDKAIA 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQN-SSMTTTPLSSRKSRSDPV 112
+G R LR + +KN + S+ T DPV
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPV 119
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|170076900|ref|YP_001733538.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169884569|gb|ACA98282.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 84
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNLD V E L ++ G+V +Y+P D+ET + +GF FVE ++E D AI+
Sbjct: 3 IYVGNLDYAVEEDDLREVFNDYGKVKRVYLPVDRETQRKRGFGFVEMSNDEEEDKAIEAL 62
Query: 71 SG 72
G
Sbjct: 63 DG 64
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
GC +Y+GN+ ++++ L + G+V D ++P ++ET +P+GFAFV + S A AI
Sbjct: 1 GCKLYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAI 60
Query: 68 KLFSGIVTLYNRTLRFALS 86
G + R LR +S
Sbjct: 61 ADLDG-KEIDGRALRVNVS 78
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +S C V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ E
Sbjct: 1 MASSSQRRC-VFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
E A A + + R LR + DK T
Sbjct: 60 ETALSARRNLQSY-EINGRQLRVDFAENDKGT 90
>gi|195470172|ref|XP_002087382.1| GE16604 [Drosophila yakuba]
gi|194173483|gb|EDW87094.1| GE16604 [Drosophila yakuba]
Length = 240
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ GNLDE+V+E +LY++ +QAG + + IP D + + F FV Y+ +A+ L+
Sbjct: 72 LFCGNLDERVTEEILYEVFLQAGPIEGVRIPTDN-NGRQRNFGFVTYQRLCAVPFALDLY 130
Query: 71 SGI 73
G+
Sbjct: 131 QGL 133
>gi|402586187|gb|EJW80125.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, partial
[Wuchereria bancrofti]
Length = 187
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V+E++L I G +V + IP D ET K +GF FVEYE E A AI
Sbjct: 15 LYVGGFGEEVNEKILQAGFIPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAAIDNM 74
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ RT+R + K + S
Sbjct: 75 ND-SELFGRTIRCNFARPPKANERSQ 99
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Gorilla gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa,
isoform CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|307154466|ref|YP_003889850.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984694|gb|ADN16575.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 98
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V ++ L ++ G+V +Y+P D+ET +GFAFVE E+ E+ D AI
Sbjct: 1 MSIYVGNLPHEVEDKHLSEVFSDYGKVNRVYLPTDRETGLRRGFAFVEMETPEMEDAAIS 60
Query: 69 LFSG 72
G
Sbjct: 61 TLDG 64
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor
subunit 2 [Felis catus]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3
[Saimiri boliviensis boliviensis]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 15 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 74
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 75 LNG-REFSGRALRVDNAASEKNKE 97
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|237838167|ref|XP_002368381.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|211966045|gb|EEB01241.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|221484348|gb|EEE22644.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii GT1]
gi|221505675|gb|EEE31320.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii VEG]
Length = 282
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C VY+GNL+ +E LY++ QAG + + + +++T P GFAFVE+ + A A+
Sbjct: 34 CVVYVGNLNFSTTEDELYEVFSQAGLIRRVVMGLNRQTRAPCGFAFVEFFRPQSAQIAVA 93
Query: 69 LFSGIVTLYNRTLRF-ALSGQD 89
+ +G + R +R A SG+D
Sbjct: 94 VLNG-CSCDGRVIRVDADSGED 114
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++G L +SE + I Q G ++D+ +PRDKET K KGF FV YE + A+
Sbjct: 34 IFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 71 SGIVTLYNRTLR 82
+G L RTLR
Sbjct: 94 NGAKVL-ERTLR 104
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Gorilla gorilla gorilla]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|406926747|gb|EKD62896.1| RNA-binding protein [uncultured bacterium]
Length = 134
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+Y+GNL V+ L + +AG VVD + K+T + KGF FVE E+EE A AI+
Sbjct: 4 KLYVGNLSYTVTSDELRKLFAEAGTVVDAVVISFKDTGRSKGFGFVEMETEEAAKAAIEK 63
Query: 70 FSG 72
F+G
Sbjct: 64 FNG 66
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Saimiri boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V +GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|83314770|ref|XP_730505.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490246|gb|EAA22070.1| synthetic antigen of P.falciparum, putative [Plasmodium yoelii
yoelii]
Length = 617
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C+++IGN+ +SE L++IL + G VV++ I D + + KGFAF EY+ E A+K
Sbjct: 7 CSLWIGNIPFDLSENELHEILSRVGEVVNVRIKYDIDKNVSKGFAFCEYKDIETCMLALK 66
Query: 69 LFSG 72
+G
Sbjct: 67 YLNG 70
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|268534532|ref|XP_002632397.1| C. briggsae CBR-CYN-13 protein [Caenorhabditis briggsae]
Length = 332
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E V+E+VL I G VV + IP D E+ K +GF FVE++ E A AI
Sbjct: 13 LYVGGFSEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ +T+R + K T+ S
Sbjct: 73 NE-SELFGKTIRVNFARPPKATERSQ 97
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|91085985|ref|XP_972080.1| PREDICTED: similar to CG10466 CG10466-PA [Tribolium castaneum]
gi|270010180|gb|EFA06628.1| hypothetical protein TcasGA2_TC009547 [Tribolium castaneum]
Length = 266
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V+IG L ++E + I Q G VV++ + RDK++ K KGF F+ YE + D A+ F
Sbjct: 36 VFIGGLPFDLTEGDIICIFSQYGEVVNINLIRDKDSGKSKGFCFLCYEDQRSTDLAVDNF 95
Query: 71 SGIVTLYNRTLR 82
+GI L NRT+R
Sbjct: 96 NGIKIL-NRTIR 106
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|297800520|ref|XP_002868144.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313980|gb|EFH44403.1| hypothetical protein ARALYDRAFT_493257 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++G+L+++ +E+ + +I +Q GRV D+Y+ RD E + +G FV+Y S+E A AI
Sbjct: 220 LFVGSLNKQATEKEVEEIFLQFGRVEDVYLMRD-EYRQSRGCGFVKYSSKETAMAAIDGL 278
Query: 71 SGIVTL--YNRTL--RFALSGQDKNTQNSSMTT 99
+G T+ N+ L RFA + K ++ MT
Sbjct: 279 NGTYTMRGCNQPLIVRFADPKRPKPGESRDMTA 311
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
+S +++G++ E + + G V+++ + +DK T + +G FV+Y + + AD
Sbjct: 124 SSTVKLFVGSVPRTAIEEEVRPFFEKHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADR 183
Query: 66 AIKLFSGIVTL 76
AI+ +TL
Sbjct: 184 AIRALHNQITL 194
>gi|225432522|ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Vitis
vinifera]
Length = 145
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++I L + E L Q G V + I R+K + +P GFAF + +EE A A+K+
Sbjct: 66 IFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVKMM 125
Query: 71 SGIVTLYNRTLRFAL 85
G +++ L FAL
Sbjct: 126 DGKACIFDNILCFAL 140
>gi|308274216|emb|CBX30815.1| Putative RNA-binding protein rbpA [uncultured Desulfobacterium
sp.]
Length = 94
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
N+YIGNL +E L + ++ G V + + +D T KPKGF F+E S AD AIK
Sbjct: 1 MNIYIGNLSIATTEETLKTLFVEFGNVETVKVIKDNFTGKPKGFGFIEMPSNSEADQAIK 60
Query: 69 LFSG 72
+G
Sbjct: 61 ALNG 64
>gi|159474400|ref|XP_001695313.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158275796|gb|EDP01571.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 133
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++ G LD ++E L + Q G VVDL + RDK++ K KGFAFV YE + A F
Sbjct: 38 IFAGGLDYDLTEGDLLAVFAQFGEVVDLNLIRDKDSGKSKGFAFVAYEDQRSTVLATDNF 97
Query: 71 SGIVTLYNRTLR 82
+G + RT+R
Sbjct: 98 NG-AKVAGRTIR 108
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|154285756|ref|XP_001543673.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407314|gb|EDN02855.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 232
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG+L +SE + I Q G V L + RDKET K KGFAF++YE + D A+
Sbjct: 38 IYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 97
Query: 71 SGIVTLYNRTLR 82
G T+ R +R
Sbjct: 98 GG-ATILGRMIR 108
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L +I + G V+ + + D+ET KPKG+ F EY+ +E A A++
Sbjct: 18 VFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRNL 77
Query: 71 SGIVTLYNRTLR 82
+G V R LR
Sbjct: 78 NGYV-FGGRPLR 88
>gi|380798461|gb|AFE71106.1| peptidyl-prolyl cis-trans isomerase E isoform 1, partial [Macaca
mulatta]
gi|380798463|gb|AFE71107.1| peptidyl-prolyl cis-trans isomerase E isoform 1, partial [Macaca
mulatta]
Length = 290
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 16 LDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSGIVT 75
L E+V ++VL+ I G + D+ IP D ET+K +GFAFVE+E E A AI +
Sbjct: 2 LAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNE-SE 60
Query: 76 LYNRTLRFALS 86
L+ RT+R L+
Sbjct: 61 LFGRTIRVNLA 71
>gi|344302677|gb|EGW32951.1| hypothetical protein SPAPADRAFT_150389 [Spathaspora passalidarum
NRRL Y-27907]
Length = 256
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
+ N +Y GN+D + +E ++Y++ IQ G V + +P+D+ +G+ FVE+ S + A
Sbjct: 24 DRNPNATLYFGNIDPRATELLMYELFIQFGPVRSINMPKDRILRTHQGYGFVEFRSSKDA 83
Query: 64 DYAIKLFSGIVTLYNRTLRF 83
+Y + + G V LY + ++
Sbjct: 84 EYVLDILRG-VRLYGKLVKL 102
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
+ G + G ++I NL+E V E+ L D + G ++ I + + K GFAF+ Y+S
Sbjct: 130 LPGYVDVGAKLFINNLNELVDEKFLSDTFGKFGTLIQTPIVKRDDEGKSLGFAFLNYDSF 189
Query: 61 EIADYAIKLFSGIVTL 76
+D AI+ +G++ +
Sbjct: 190 NSSDLAIEKMNGVILM 205
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ ++E + DI AG+VV+ + D+ET +PKGF F EY + A A++
Sbjct: 9 SVFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASAVRN 68
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSMT 98
+ + NR LR S + S+ T
Sbjct: 69 LND-YEIMNRKLRVDFSNDGAEDETSAPT 96
>gi|428308134|ref|YP_007144959.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428249669|gb|AFZ15449.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 113
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL +V+E L + + G V + +P D+ET +P+GFAFVE ++E+ + AI+
Sbjct: 3 IYVGNLSYEVTEDDLNSVFAEYGTVKRVNLPNDRETGRPRGFAFVEMQTEDQENAAIEAL 62
Query: 71 SG 72
G
Sbjct: 63 DG 64
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ V+E +L +I +AG V++ + D+ET KPKG+ F EY A A++
Sbjct: 14 SVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMRN 73
Query: 70 FSGIVTLYNRTLR--FALSGQDKNT 92
+G + R LR FA G N+
Sbjct: 74 LNG-YEINGRNLRVDFADGGDKSNS 97
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +Y+GNL ++ L +I +AG V ++ I D+ TD+ +GFAFV S E A AI
Sbjct: 108 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 167
Query: 68 KLFSG 72
+LF G
Sbjct: 168 RLFDG 172
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +SE + DI AGRVV + D+E KPKGF F EY + A A++
Sbjct: 1283 VFVGNIPYGLSEEQISDIFSSAGRVVSFRLVYDRENGKPKGFGFAEYPDSDSAASAVRNL 1342
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMT 98
+ + R LR S + + +T
Sbjct: 1343 NDYEVM-GRKLRVDFSNEGGEDGHGGLT 1369
>gi|307155022|ref|YP_003890406.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306985250|gb|ADN17131.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 109
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GNL +V E L ++ + G V +Y+P D+ET K +GF FVE +++ D AI+
Sbjct: 3 IYVGNLHYEVEEGELREVFAEYGTVRRVYLPEDRETGKKRGFGFVEMSTDDEEDKAIETL 62
Query: 71 SGIVTL 76
G +
Sbjct: 63 DGAEWM 68
>gi|390599914|gb|EIN09310.1| translation initiation factor eIF3g [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
SGN + + + N+ E E L D+ + GRV +++ RD+ET KGFAFV +E +
Sbjct: 207 SGNRDDLPTLRVTNISEDTQENDLRDLFGRFGRVARVFVGRDRETGAGKGFAFVSFEEKA 266
Query: 62 IADYAIKLFSGI 73
+A+ A++ +G
Sbjct: 267 VAERAMQKMNGF 278
>gi|308509216|ref|XP_003116791.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
gi|308241705|gb|EFO85657.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
Length = 260
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 13 IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSG 72
+ NL ++++E L D+ + GRV+ ++I RDK T PKGFAFV +ES + A AI +
Sbjct: 184 VTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESRDDAARAIAELND 243
Query: 73 IVTLYNRTLRFALS 86
I +Y+ L+ +
Sbjct: 244 I-RMYHMVLKVEWT 256
>gi|425444904|ref|ZP_18824945.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
gi|389735245|emb|CCI01218.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9443]
Length = 97
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++++GNL ++S+ L D+ + G+V ++IP DK+T + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFAEYGKVKRVHIPLDKDTQRKRGFAFVEMESKAQEAAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
++ C +YI NL ++ E + D+L Q G++ L + ++++T K +G+ F EYE E+ D
Sbjct: 296 SADCKLYIQNLPPEMGEDQVRDLLEQFGKLRVLNLIKNRQTGKHRGYGFFEYEDPEVTDQ 355
Query: 66 AIKLFSGIVT 75
AI+ +G V
Sbjct: 356 AIEALNGFVC 365
>gi|167537650|ref|XP_001750493.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771033|gb|EDQ84707.1| predicted protein [Monosiga brevicollis MX1]
Length = 382
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG LD + +E + + Q G D+ + RDK++ K KGF F+ YE + A+ F
Sbjct: 34 IYIGGLDYRFTEGDVLSVFSQYGEPTDINLVRDKDSGKSKGFCFLAYEDQRSTILAVDNF 93
Query: 71 SGIVTLYNRTLRFALSGQ 88
+G V L RT+R G+
Sbjct: 94 NG-VKLAGRTIRVDHCGE 110
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ EE A A +
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 71 SGIVTLYNRTLRFALSGQDK 90
G + R LR + DK
Sbjct: 69 QG-YEINGRQLRVDFAENDK 87
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+GN+ + +E LY + Q G V+ I D++T++PKGFAFVE + + A AI
Sbjct: 5 IYVGNMSYQTTEEALYSLFAQYGDVMSARIIMDRDTNRPKGFAFVEMDDDSAAVAAISQL 64
Query: 71 SG 72
G
Sbjct: 65 DG 66
>gi|401827248|ref|XP_003887716.1| RNA binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998723|gb|AFM98735.1| RNA binding protein [Encephalitozoon hellem ATCC 50504]
Length = 214
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
SGC++++GN+D +V E + + L GRVV + DK T K +GF F EYES I + A
Sbjct: 3 SGCSIFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEYESPLIVEKA 62
Query: 67 IK 68
++
Sbjct: 63 LQ 64
>gi|357157437|ref|XP_003577798.1| PREDICTED: uncharacterized protein LOC100840159 [Brachypodium
distachyon]
Length = 477
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L I + G VV + DKET KPKG+ F EY+ EE A A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 71 SGIVTLYNRTLR--FALSGQ--DKNTQNSSMTTTPLSSRKSRSDPVPVPVNGMEISHHSM 126
G + R LR FA +G+ D+N + S + P PV G H +
Sbjct: 73 QGY-EVNGRQLRVDFAENGRNTDRNREKGRGGPGMASCVDAPKQPTATPVVGDTSLHQPV 131
Query: 127 RISGTRHYSS 136
+ H +S
Sbjct: 132 GLPPAIHAAS 141
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIGNL V+E +L ++ + G ++D I D+ET + +GF F+ + ++ A+ A+
Sbjct: 218 VYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASL 277
Query: 71 SGIVTLYNRTLRFALSGQDKNTQ 93
+G L R +R L+ +N +
Sbjct: 278 NG-KELEGRAMRVDLALSSRNIE 299
>gi|391333252|ref|XP_003741033.1| PREDICTED: ELAV-like protein 2-like [Metaseiulus occidentalis]
Length = 409
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEI 62
G S N+ + L +K+S++ YD+ Q GR+ I R+K T GF FV+Y E
Sbjct: 10 GEVPSSSNLIVNYLPQKLSDQEFYDLFGQIGRIKTCKIVRNKLTGYSYGFGFVDYHDPED 69
Query: 63 ADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSRSDP 111
A AI +++G + N+TL+ A++ + N+ +S T + DP
Sbjct: 70 AKKAIGVYNGF-KMNNKTLKVAIA-KPSNSNHSKNTNVYIRGVPKNFDP 116
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 4 NSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
N + NVYI + + L ++ GR+V + RD T+ KG AF Y+ +E A
Sbjct: 98 NHSKNTNVYIRGVPKNFDPDELENLFGTFGRLVQFRVLRDLSTNVNKGVAFALYDDKENA 157
Query: 64 DYAIKLFSG 72
D AI+ G
Sbjct: 158 DRAIQDMDG 166
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ +E L++I +AG +V + + D ET KPKGFAFVEYE A AI+
Sbjct: 10 DVFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRN 69
Query: 70 FSG 72
+G
Sbjct: 70 LNG 72
>gi|145231672|ref|XP_001399311.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus niger
CBS 513.88]
gi|134056213|emb|CAK96388.1| unnamed protein product [Aspergillus niger]
gi|350634306|gb|EHA22668.1| hypothetical protein ASPNIDRAFT_46906 [Aspergillus niger ATCC 1015]
gi|358365842|dbj|GAA82464.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
kawachii IFO 4308]
Length = 152
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKP------KGFAF 54
MS + C VY+G LD+ V+ + L + + G VVD+ +P+ D P +GF +
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTMQTLAEAFVPFGEVVDITLPK---PDLPNSNELHRGFGY 57
Query: 55 VEYESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKS 107
VE++ E A AI G LY RT++ A + K++ + T + ++
Sbjct: 58 VEFDLPEDAKEAIDNMDG-SELYGRTIKVAAAKPQKDSNEGLGSKTAIWEQEG 109
>gi|341896374|gb|EGT52309.1| CBN-EIF-3.G protein [Caenorhabditis brenneri]
Length = 262
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 13 IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSG 72
+ NL ++++E L D+ + GRV+ ++I RDK T PKGFAFV +ES + A AI +
Sbjct: 186 VTNLPQEMNEDELRDVFGKIGRVIRIFIARDKITALPKGFAFVTFESRDDAARAIAELND 245
Query: 73 IVTLYNRTLRFALS 86
I +Y+ L+ +
Sbjct: 246 I-RMYHMVLKVEWT 258
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G V+ L + D+E+ KPKG+ F EY+ +E A A++
Sbjct: 15 SVFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMRN 74
Query: 70 FSG 72
+G
Sbjct: 75 LNG 77
>gi|345562877|gb|EGX45885.1| hypothetical protein AOL_s00112g74 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 12 YIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFS 71
+IGN+ +SE + DI + G+V+ + D++T KPKGF F EY EIA A++
Sbjct: 12 FIGNIPYGLSEEQIVDIFSKVGQVLSFRLVYDRDTGKPKGFGFAEYADAEIAASAVRNLD 71
Query: 72 GIVTLYNRTLRFALSGQ-DKNTQN 94
+ R LR S + DK+ Q+
Sbjct: 72 NF-EIMGRKLRVDFSHEGDKDAQD 94
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ EE A A +
Sbjct: 9 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
Query: 71 SGIVTLYNRTLRFALSGQDK 90
G + R LR + DK
Sbjct: 69 QG-YEINGRQLRVDFAENDK 87
>gi|396081838|gb|AFN83452.1| cleavage stimulation factor [Encephalitozoon romaleae SJ-2008]
Length = 214
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
SGC++++GN+D +V E + + L GRVV + DK T K +GF F EYES I + A
Sbjct: 3 SGCSIFVGNIDFEVPEERIIEELGAVGRVVSFRMVYDKTTGKSRGFGFCEYESPLIVEKA 62
Query: 67 IK 68
++
Sbjct: 63 LQ 64
>gi|119485430|ref|ZP_01619758.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119457186|gb|EAW38312.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 100
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
+VY+GNL +V+E L + + G V + IP D+ET +P+GFAFVE +++ AI+
Sbjct: 1 MSVYVGNLSYQVTEEDLRSVFAEYGTVKQVSIPTDRETGRPRGFAFVEMDADTQEQAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 KLDG 64
>gi|224488073|sp|A8WLV5.2|EIF3G_CAEBR RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
Length = 261
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M N + + NL ++++E L D+ + GRV+ ++I RDK T PKGFAFV +ES
Sbjct: 173 MERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESR 232
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALS 86
+ A AI + I +Y+ L+ +
Sbjct: 233 DDAARAIAELNDI-RMYHMVLKVEWT 257
>gi|17232175|ref|NP_488723.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|6274493|gb|AAF06670.1|AF196328_2 RbpD [Nostoc sp. PCC 7120]
gi|1064777|dbj|BAA08402.1| RNA-binding protein [Anabaena variabilis]
gi|17133820|dbj|BAB76382.1| RNA-binding protein [Nostoc sp. PCC 7120]
Length = 110
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++YIGNL +V+E L + G+V + +P D+ET +P+GFAFVE E+E AI+
Sbjct: 1 MSIYIGNLSYQVTEEDLKLAFAEYGKVSRVQLPTDRETGRPRGFAFVEMETEAQETAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
+Y+GNL ++ L + Q G VVD + RD+ET + +GF FV Y SEE A AI
Sbjct: 3 AKIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAI 61
>gi|268530192|ref|XP_002630222.1| C. briggsae CBR-EIF-3.G.1 protein [Caenorhabditis briggsae]
gi|268570827|ref|XP_002648625.1| C. briggsae CBR-EIF-3.G.2 protein [Caenorhabditis briggsae]
Length = 255
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M N + + NL ++++E L D+ + GRV+ ++I RDK T PKGFAFV +ES
Sbjct: 167 MERNRSDENTCRVTNLPQEMNEDELRDVFGRIGRVIRIFIARDKITGLPKGFAFVTFESR 226
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALS 86
+ A AI + I +Y+ L+ +
Sbjct: 227 DDAARAIAELNDI-RMYHMVLKVEWT 251
>gi|402911185|ref|XP_003918220.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Papio
anubis]
Length = 719
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 41/63 (65%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+++G L+ K E+ L ++ GR++++ + +D+ET+K +GFAFV +ES A+ A +
Sbjct: 9 KLFVGGLNLKTDEKALKAEFVKYGRIINVLLMKDRETNKSRGFAFVTFESPADAEAAARD 68
Query: 70 FSG 72
+G
Sbjct: 69 LNG 71
>gi|387018164|gb|AFJ51200.1| RNA binding motif protein 18 [Crotalus adamanteus]
Length = 194
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 3 GNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVD---LYIPRDKETDKPKGFAFVEYES 59
G G ++IGNLD K++E L +L + G+V L+ +P+G+ FV +E+
Sbjct: 23 GALQDGHRLWIGNLDPKITEYHLLKLLQKFGKVKQFDFLFHKSGVLEGQPRGYCFVNFET 82
Query: 60 EEIADYAIKLFSGIVTLYNR-TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVP 113
++ A+ AI +G + L + +R+A + + QN + T P+S S S P
Sbjct: 83 KQEAEQAIHCLNGKLALSKKLVVRWAHAQVKRYDQNKNEKTLPISLEPSSSTESP 137
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G V+ + D+ET KPKG+ F EY+ +E A A++
Sbjct: 13 SVFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRN 72
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 73 LNG-YEIGGRTLRV 85
>gi|453231816|ref|NP_001263666.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
gi|413001245|emb|CCO25605.1| Protein EIF-3.G, isoform a [Caenorhabditis elegans]
Length = 262
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 13 IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSG 72
+ NL ++++E L D+ + GRV+ ++I RDK T PKGFAFV +ES + A AI +
Sbjct: 186 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 245
Query: 73 IVTLYNRTLRFALS 86
I +Y+ L+ +
Sbjct: 246 I-RMYHMVLKVEWT 258
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ EE A A +
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 71 SGIVTLYNRTLRFALSGQDK 90
G + R LR + DK
Sbjct: 71 QG-YEINGRQLRVDFAENDK 89
>gi|328866985|gb|EGG15368.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 436
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ SE L ++ + GRVV + D++ KP+G+ F EY +E A AI+L
Sbjct: 14 VFVGNIPYAASESDLVNLFSEVGRVVSFRLVEDRDKKKPRGYGFCEYMDQETALNAIRLL 73
Query: 71 SGIVTLYNRTLRFALSGQDK 90
+ R LR + + DK
Sbjct: 74 NN-REFNKRQLRVSYADNDK 92
>gi|323453324|gb|EGB09196.1| hypothetical protein AURANDRAFT_17250, partial [Aureococcus
anophagefferens]
Length = 84
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRD---KETDKPKGFAFVEYESEEIADYAI 67
+Y+G L E+V+E +L+ I G +V++ IP+D K +D +GFAFVE+E E AD A
Sbjct: 7 LYVGGLTEEVTEEILHAAFIPFGELVEVNIPKDHASKTSDGNRGFAFVEFELEPDADEAR 66
Query: 68 KLFSGIVTLYNRTLR 82
G L+ R LR
Sbjct: 67 FNMDG-AELFGRVLR 80
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L I + G VV + DKET KPKG+ F EY+ EE A A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 71 SGIVTLYNRTLR--FALSGQDKN 91
G + R LR FA SG++ +
Sbjct: 73 QGY-EINGRQLRVDFAESGRNTD 94
>gi|242067641|ref|XP_002449097.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
gi|241934940|gb|EES08085.1| hypothetical protein SORBIDRAFT_05g004860 [Sorghum bicolor]
Length = 545
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L I + G VV + DKET KPKG+ F EY+ EE A A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
G + R LR + +NT
Sbjct: 73 QGY-EINGRQLRVDFAENGRNT 93
>gi|47156973|gb|AAT12351.1| cleavage stimulation factor [Antonospora locustae]
Length = 214
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
GC V++GN+D +V E + + L G+VV + D+ T K KG+ F EYES IA+ A+
Sbjct: 4 GCTVFVGNIDFEVPEEKIVEELSAVGKVVSFRMMYDRATGKSKGYGFAEYESPLIAETAV 63
Query: 68 KLFSGIVTLYNRTLRFALSGQ 88
+ TLR + +G+
Sbjct: 64 Q-----------TLRISFNGR 73
>gi|425466927|ref|ZP_18846221.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
gi|389830426|emb|CCI27637.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9809]
Length = 97
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++++GNL ++S+ L D+ + G+V ++IP D+ET + +GFAFVE ES+ AI+
Sbjct: 1 MSIFVGNLSYEISQEDLVDVFKEYGQVQRVHIPVDRETQRKRGFAFVEMESKAQETAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ EE A A +
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 71 SGIVTLYNRTLRFALSGQDK 90
G + R LR + DK
Sbjct: 71 QG-YEINGRQLRVDFAENDK 89
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
N++I NLD+ V + LYD G ++ + D ET+ KGF FV YES+E A+ AI
Sbjct: 97 NIFIKNLDKTVDHKALYDTFSAFGNILSCKVVTD-ETNTSKGFGFVHYESQESAEKAIAK 155
Query: 70 FSGIV 74
+G++
Sbjct: 156 VNGMM 160
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI-- 67
NV+I NL E VSE+ L D+L G++ +L I D E K KGF F +E + A A+
Sbjct: 187 NVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTD-EKGKSKGFGFANFEHADAAKGAVEN 245
Query: 68 ---KLFSGIVTLYNRTLR 82
K+FSG V R +
Sbjct: 246 ENGKMFSGKVIYVGRAQK 263
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
S ++Y+G+L VSE L+++ Q G V +L I RD T + +A++ Y + A+ A
Sbjct: 6 SSSSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERA 65
Query: 67 IKLFSGIVTLYNRTLRFALSGQDKNTQNSSM 97
+ + + + R S +D + + S +
Sbjct: 66 LDTLNN-TPIKGKACRIMWSQRDPSLRKSGI 95
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G N+YI NLD+ + L G + + RD + KGF FV Y + + A A+
Sbjct: 281 GVNLYIKNLDDSIDSDKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAV 340
Query: 68 KLFSG--------IVTLYNR--TLRFALSGQDKNTQNSSMTTTPLSSRKSRSDPVPVPVN 117
G V R R L Q ++S M P+ S + P+ P
Sbjct: 341 AEMHGRMVGSKPLYVAFAQRKDVRRAQLEAQHTKFKSSRM---PVQSIYPPTGPIFYPPA 397
Query: 118 GMEISHHSM 126
GM + + M
Sbjct: 398 GMPVVYPQM 406
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|17533393|ref|NP_495778.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
gi|3024026|sp|Q19706.1|EIF3G_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Eukaryotic
translation initiation factor 3 subunit 4
gi|3876226|emb|CAA90354.1| Protein EIF-3.G, isoform b [Caenorhabditis elegans]
Length = 256
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 13 IGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLFSG 72
+ NL ++++E L D+ + GRV+ ++I RDK T PKGFAFV +ES + A AI +
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 73 IVTLYNRTLRFALS 86
I +Y+ L+ +
Sbjct: 240 I-RMYHMVLKVEWT 252
>gi|325186227|emb|CCA20728.1| peptidylprolyl cistrans isomerase E putative [Albugo laibachii
Nc14]
Length = 138
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M +N C +Y+G L +V+E+VL+ + G + ++ IP D E +GF FVEYE E
Sbjct: 1 MGSRANKKC-LYVGGLTRQVTEQVLHAAFVPFGPIKEIQIPSDTEVGASRGFGFVEYEEE 59
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALS 86
+ A+ A+ ++ +TLR ++
Sbjct: 60 DDANDAMDNMDE-SEMFGQTLRVCVA 84
>gi|254564595|ref|XP_002489408.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|238029204|emb|CAY67124.1| Splicing factor that reanneals U4 and U6 snRNPs during spliceosome
recycling [Komagataella pastoris GS115]
gi|328349837|emb|CCA36237.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Komagataella pastoris CBS 7435]
Length = 865
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
S S+ G ++I NLD K+++ L + + G++ +Y+P D ET K GFAF+ ++ ++
Sbjct: 664 SQRSDEGRELFIRNLDFKLTKEDLVPLFEKYGQIDKIYVPCDSETKKNNGFAFITFKEKD 723
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRKSR 108
A+ A++L S V L +R L +L+ + K + S + P + S+
Sbjct: 724 AAESALELNS--VPLLDRPLDVSLA-KKKPKKVSVLEMNPAPKKNSK 767
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ + +E L DI + G V+ + D+ET KPKG+ F EY+ +E A A++
Sbjct: 14 VFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMRNL 73
Query: 71 SGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 74 NG-YEIGGRTLRV 85
>gi|313238973|emb|CBY13961.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G L E+V E++++ I G ++D+ +P D ET+ +GFAFVEY+ A A+
Sbjct: 9 LYVGGLAEEVDEKMVHAAFIPFGDIIDITVPLDFETEAHRGFAFVEYKETGDAASAMDNM 68
Query: 71 SGIVTLYNRTLRFALS 86
L+ RTL+ ++
Sbjct: 69 DD-AELFGRTLKVNIA 83
>gi|357117760|ref|XP_003560630.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Brachypodium distachyon]
Length = 654
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
S +VY+GNL+ V+E+ L D+ QA VV + I DK T + G+A+V + S E A A
Sbjct: 29 SSVSVYVGNLEASVTEQQLLDLFSQAVPVVSVRICDDKVTGRSLGYAYVNFHSHEDAKVA 88
Query: 67 IKLFSGIVTLYNRTLRFALSGQDKNTQNS 95
++ F+ V + +++R S +D + S
Sbjct: 89 LEYFNFTV-VNGKSIRVMFSNRDPTLRRS 116
>gi|170090564|ref|XP_001876504.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647997|gb|EDR12240.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++G L ++E + I Q G V+DL++PRDK+T K KGF F+ YE + A+
Sbjct: 35 VFVGGLHFDLTEGDVITIFSQYGEVMDLHMPRDKDTGKTKGFGFLMYEDQRSTVLAVDNL 94
Query: 71 SGIVTLYNRTLR 82
+G L RTLR
Sbjct: 95 NGAKVL-ERTLR 105
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 52.4 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 27 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 86
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 87 LNG-REFSGRALRVDNAASEKNKE 109
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|156096969|ref|XP_001614518.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803392|gb|EDL44791.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 299
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLD +++E + + Q G +D+ + RDKET K KG+ F+ YE + A+ F
Sbjct: 38 IYIGNLDSRLTEGDIVIVFSQFGEPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNF 97
Query: 71 SGIVTL 76
+G L
Sbjct: 98 NGYKLL 103
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 6 NSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADY 65
+SGC++ I NL+ S + I G+V D+Y+P D T KP+GF FVEY + A
Sbjct: 3 DSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKE 62
Query: 66 AIKLF 70
AI +
Sbjct: 63 AINIL 67
>gi|452821788|gb|EME28814.1| hypothetical protein Gasu_37050 [Galdieria sulphuraria]
Length = 124
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIA 63
++Y+G LD +V+E +L+ + G ++D+ +P D ET + +GFAF+E+E E A
Sbjct: 5 SLYVGGLDPQVTEEILWAAFVPFGDLLDVTMPLDNETQQHRGFAFIEFELPEDA 58
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IGNL +SE +++ + G V + +P+D ++ +PKGF +VE+ ++E A A+
Sbjct: 308 LFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALDAM 367
Query: 71 SGIVTLYNRTLRFALS 86
+G L R LR S
Sbjct: 368 TG-QELAGRPLRLDFS 382
>gi|340369320|ref|XP_003383196.1| PREDICTED: hypothetical protein LOC100639137 [Amphimedon
queenslandica]
Length = 295
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG LD ++E + + Q G +V++ + RDK+T K KGF F+ YE + A+ F
Sbjct: 32 IFIGGLDYDLTEGDVLSVFSQYGEIVNINLVRDKKTGKSKGFCFIGYEDQRSTILAVDNF 91
Query: 71 SGIVTLYNRTLRF 83
+GI L R++R
Sbjct: 92 NGI-KLCGRSIRV 103
>gi|324522371|gb|ADY48048.1| Peptidyl-prolyl cis-trans isomerase E, partial [Ascaris suum]
Length = 314
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E+V E++L+ + G +V + IP D ET K +GF FVE+E E A AI
Sbjct: 15 LYVGGFGEEVDEKILHAGFLPFGDIVGISIPMDYETGKHRGFGFVEFELAEDAAAAIDNM 74
Query: 71 SGIVTLYNRTLR 82
+ ++ RT+R
Sbjct: 75 ND-SEMFGRTIR 85
>gi|427706332|ref|YP_007048709.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427358837|gb|AFY41559.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 110
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V+E L + G+V + +P D+ET +P+GFAFVE E+E AI+
Sbjct: 1 MSIYVGNLSYQVTEEDLKMAFSEYGKVSRVQLPTDRETGRPRGFAFVEMETESQETAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +SE + DI AG+V++ + D+ET +PKGF F EY + A A++
Sbjct: 9 VFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDSAASAVRNL 68
Query: 71 SGIVTLYNRTLRFALS---GQDKN------------TQNSSMTTTPLSSRKSRSDPVP 113
+ T+ R LR S G D N N+ T P + + S P+P
Sbjct: 69 NDYETM-GRKLRVDFSNEGGTDDNDFNQGRDGLSFSAPNTYGQTAPAAPQASTLPPLP 125
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S G +VY+GN + SE + + G V ++ I D+ET +P+GFAFVE+ E A
Sbjct: 2 SGQGFSVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQ 61
Query: 65 YAIKLFSGIVTLYNRTLRFALS 86
A++ +G R LR L+
Sbjct: 62 KAVQELNG-AEFNGRQLRVNLA 82
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIAD 64
S +YIGNL ++ L ++ +AG VV + + DK TD+ +GFAFV + E A
Sbjct: 111 SREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAK 170
Query: 65 YAIKLFSGIVTLYNRTLR 82
AI++F G + RT+R
Sbjct: 171 EAIRMFDG-SQIGGRTVR 187
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y GNL ++ + L D ++ I D+ + K +GF FV +E+ E A+ A++
Sbjct: 220 IYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSFETAEDAESALESM 279
Query: 71 SGIVTLYNRTLRFALSG 87
+G V + R LR ++
Sbjct: 280 NG-VEVEGRPLRLNIAA 295
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|116620134|ref|YP_822290.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223296|gb|ABJ82005.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 132
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
N+++GNLD SE + + + G+V I D+ET + +GFAFVE E+E AD AI
Sbjct: 3 NIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAISA 62
Query: 70 FSGIVTLYNRTL 81
+G TL R L
Sbjct: 63 LNG-YTLDGRAL 73
>gi|392902210|ref|NP_001255925.1| Protein CYN-13, isoform a [Caenorhabditis elegans]
gi|5832813|emb|CAB55151.1| Protein CYN-13, isoform a [Caenorhabditis elegans]
Length = 331
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+Y+G E V+E+VL I G VV + IP D E+ K +GF FVE++ E A AI
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSS 96
+ L+ +T+R + K T+ S
Sbjct: 73 NE-SELFGKTIRVNFARPPKATERSQ 97
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
VYIG L ++E + IL Q G + D+ +P+DK T K +GFAFV YE + A+
Sbjct: 34 VYIGGLVTGLTEGDVITILSQFGEIADINMPKDKATGKSRGFAFVMYEDQRSTVLAVDNL 93
Query: 71 SGIVTLYNRTLRF 83
+G T+ RTLR
Sbjct: 94 NG-STVLGRTLRV 105
>gi|328869827|gb|EGG18202.1| hypothetical protein DFA_03689 [Dictyostelium fasciculatum]
Length = 128
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 2 SGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEE 61
+ N N +Y+G L+E V+ ++ I G +VD+ +P D + + KG+ FVEYES E
Sbjct: 4 TNNVNKKKTIYVGGLEESVTVDIITAAFIPFGDIVDIILPNDHKNHRNKGYCFVEYESSE 63
Query: 62 IADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSM 97
A A+ + LY +TL+ ++ + +N S+
Sbjct: 64 DAADAVDNMNE-SELYGKTLKCVIAKPNTIDKNKSL 98
>gi|226528788|ref|NP_001140273.1| uncharacterized protein LOC100272317 [Zea mays]
gi|194698788|gb|ACF83478.1| unknown [Zea mays]
gi|414588427|tpg|DAA38998.1| TPA: hypothetical protein ZEAMMB73_344937 [Zea mays]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L I + G VV + DKET KPKG+ F EY+ EE A A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
G + R LR + +NT
Sbjct: 73 QGY-EINGRQLRVDFAENGRNT 93
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +Y+GNL ++ L +I +AG V ++ I D+ TD+ +GFAFV S E A AI
Sbjct: 102 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 161
Query: 68 KLFSG 72
+LF G
Sbjct: 162 RLFDG 166
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|428214099|ref|YP_007087243.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
gi|428002480|gb|AFY83323.1| RRM domain-containing RNA-binding protein [Oscillatoria acuminata
PCC 6304]
Length = 104
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V++ L + + G V +++P D+ET +P+GFAFVE +SE AI+
Sbjct: 1 MSIYVGNLSYEVTQEDLTAVFAEYGSVQRVHLPTDRETGRPRGFAFVEMKSETEETAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|302768403|ref|XP_002967621.1| hypothetical protein SELMODRAFT_88913 [Selaginella
moellendorffii]
gi|300164359|gb|EFJ30968.1| hypothetical protein SELMODRAFT_88913 [Selaginella
moellendorffii]
Length = 64
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 12 YIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
++GNLD +V+E +L+++ Q V +YIPRDK T G+ FVE +E
Sbjct: 1 HVGNLDPQVTEDILWELFTQVAHVQSVYIPRDKITTAHSGYGFVELANE 49
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G V++GNL L D Q G VVD + +D+ET + +GF FV + S E A A+
Sbjct: 10 GTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAV 69
Query: 68 KLFSGIVTLYNRTLRFALS 86
+G L R +R L+
Sbjct: 70 DAMNG-QDLNGRNIRVNLA 87
>gi|242014246|ref|XP_002427802.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512271|gb|EEB15064.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 190
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLD VSE VLY++ +QAG + + I + D + + FV Y+ E DYAIKL+
Sbjct: 10 LYIGNLDRNVSEEVLYELFLQAGPIERVAIVSN-SVDSFR-YGFVTYKHEVSVDYAIKLY 67
Query: 71 SGIVTLYNRTLRFALSGQ 88
G L+ + L G+
Sbjct: 68 KG-TYLFKKVLSIKKKGK 84
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L + E LY+ QAG ++ I R+K+T +P+G+ F+E+ S IA+ ++ +
Sbjct: 113 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 172
Query: 71 SG 72
+G
Sbjct: 173 NG 174
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +SE + DI +AG+V++ + D+ET KPKGF F EY + A A++
Sbjct: 10 VFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASAVRNL 69
Query: 71 SGIVTLYNRTLRFALSGQDKNTQN 94
+ + R LR S + +T +
Sbjct: 70 ND-TEIMGRKLRVDFSNEKPSTND 92
>gi|391347296|ref|XP_003747900.1| PREDICTED: uncharacterized protein LOC100907905 [Metaseiulus
occidentalis]
Length = 162
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GNL E V E +LY++ +QAG + + + + P F FV Y+ EE YAI LF
Sbjct: 8 LWVGNLSENVDEDLLYELFLQAGPLQTVTVKKPANGQNP--FGFVTYQHEESVAYAIVLF 65
Query: 71 SGIVTLYNRTL 81
G TL+ R L
Sbjct: 66 EG-TTLFGRVL 75
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ +E L I + G VV + DKET KPKG+ F EY+ EE A A +
Sbjct: 13 VFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARRNL 72
Query: 71 SGIVTLYNRTLRFALSGQDKNT 92
G + R LR + +NT
Sbjct: 73 QGY-EVNGRQLRVDFAENGRNT 93
>gi|71001898|ref|XP_755630.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
fumigatus Af293]
gi|66853268|gb|EAL93592.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus fumigatus Af293]
gi|159129687|gb|EDP54801.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus fumigatus A1163]
Length = 152
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 57
MS + C VY+G LD+ V+ + L + + G VVD+ +P+ D +GF +VE+
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSGDLHRGFGYVEF 60
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRK 106
+ E A AI G LY RT++ A + K + + T + ++
Sbjct: 61 DLPEDAAEAIDNMDG-SELYGRTIKVAAAKPQKESNEGLGSKTAIWEQE 108
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L + E LY+ QAG ++ I R+K+T +P+G+ F+E+ S IA+ ++ +
Sbjct: 69 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 128
Query: 71 SG 72
+G
Sbjct: 129 NG 130
>gi|354568572|ref|ZP_08987736.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353540295|gb|EHC09772.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 104
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL VS+ L D+ + G V + +P D+ET + +GF FVE ESE AI
Sbjct: 1 MSIYVGNLSYSVSQEELSDVFSEYGTVTRVQLPTDRETGRSRGFGFVEMESEAAETAAIN 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V+E L + G V + +P D+ET +P+GFAFVE ES+ AI
Sbjct: 1 MSIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAID 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ-----NSSMTTTPLSS 104
+ L R LR + +K+ + +S+ P+ S
Sbjct: 77 LNAF-DLNGRPLRVDNAASEKSKEELKNLQASLGGPPIES 115
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 8 GCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
G +Y+GNL ++ L +I +AG V ++ I D+ TD+ +GFAFV S E A AI
Sbjct: 113 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 172
Query: 68 KLFSG 72
+LF G
Sbjct: 173 RLFDG 177
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG L ++E + I Q G V+D+ +PRDKET K KGF F+ YE + A+
Sbjct: 34 IFIGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKETGKTKGFGFLMYEDQRSTILAVDNL 93
Query: 71 SGIVTLYNRTLRF 83
+G L RTLR
Sbjct: 94 NGAKVL-ERTLRV 105
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 18 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 77
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 78 LNG-YEIGGRTLRV 90
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG+L +SE + I Q G V L + RDKET K KGFAF++YE + D A+
Sbjct: 35 IYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 71 SGIVTLYNRTLRF 83
G T+ R +R
Sbjct: 95 GG-ATILGRMIRV 106
>gi|428163795|gb|EKX32848.1| hypothetical protein GUITHDRAFT_120952 [Guillardia theta CCMP2712]
Length = 310
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
VY+GNL V + L + L + G V L + R +D+ KGFA EY +EE A AI+
Sbjct: 69 KVYVGNLPISVQDDALKEFLSKVGEVTSLSVKRFPNSDRCKGFAMAEYATEEQAKAAIEQ 128
Query: 70 FSGIVTLYNRTLRFALSGQD 89
+G + L A SG D
Sbjct: 129 LAGSSFMKRSVLVRADSGID 148
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L + E LY+ QAG ++ I R+K+T +P+G+ F+E+ S IA+ ++ +
Sbjct: 69 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 128
Query: 71 SG 72
+G
Sbjct: 129 NG 130
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++Y+GNL +V++ L I + G V + +P D+ET P+GF FVE ESE AI+
Sbjct: 1 MSIYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVEMESEAAESTAIE 60
Query: 69 LFSGIVTLYNRTLR 82
G RT++
Sbjct: 61 ALDG-AEWMGRTMK 73
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIG+L +SE + I Q G V L + RDKET K KGFAF++YE + D A+
Sbjct: 35 IYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRSTDLAVDNL 94
Query: 71 SGIVTLYNRTLRF 83
G T+ R +R
Sbjct: 95 GG-ATILGRMIRV 106
>gi|119481457|ref|XP_001260757.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Neosartorya fischeri NRRL 181]
gi|119408911|gb|EAW18860.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Neosartorya fischeri NRRL 181]
Length = 152
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDK---ETDKPKGFAFVEY 57
MS + C VY+G LD+ V+ + L + + G VVD+ +P+ D +GF +VE+
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSGDLHRGFGYVEF 60
Query: 58 ESEEIADYAIKLFSGIVTLYNRTLRFALSGQDKNTQNSSMTTTPLSSRK 106
+ E A AI G LY RT++ A + K + + T + ++
Sbjct: 61 DLPEDAAEAIDNMDG-SELYGRTIKVAAAKPQKESNEGLGSKTAIWEQE 108
>gi|425434851|ref|ZP_18815315.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389675575|emb|CCH95322.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
Length = 97
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++++GNL ++S+ L D+ + G V ++IP DKET + +GFAFVE E++ AI+
Sbjct: 1 MSIFVGNLSYEISQEALVDVFREYGEVKRVHIPVDKETGRKRGFAFVEMENKAQETTAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
++Y+G+LD V++ LYD+ Q G+VV + + RD T + G+ +V Y + + A A+ +
Sbjct: 32 SLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 91
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQNSSM 97
+ L N+ LR S +D + + S M
Sbjct: 92 LN-FTPLNNKPLRIMYSHRDPSIRKSGM 118
Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
N++I NLD+ + + L+D G ++ + D + + KG+ FV+++SEE A AI
Sbjct: 120 NIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDA-SGQSKGYGFVQFDSEEAAQNAIDK 178
Query: 70 FSGIV 74
+G++
Sbjct: 179 LNGML 183
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L + E LY+ QAG ++ I R+K+T +P+G+ F+E+ S IA+ ++ +
Sbjct: 69 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 128
Query: 71 SG 72
+G
Sbjct: 129 NG 130
>gi|21591633|gb|AAM64164.1|AF515695_1 cleavage stimulation factor 64 [Arabidopsis thaliana]
Length = 461
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +S+ V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ E
Sbjct: 1 MASSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDE 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
E A A + + R LR + DK T
Sbjct: 61 ETALSARRNLQSY-EINGRQLRVDFAENDKGT 91
>gi|338720869|ref|XP_001498616.3| PREDICTED: putative RNA-binding protein 11-like [Equus caballus]
Length = 234
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+++IG ++ +V E +LY + +QAG + + + +D+E KPK F FV ++ E YAI L
Sbjct: 9 SIFIG-VETRVLEGILYRVFLQAGPLTKVTLCKDRE-GKPKSFGFVCFKHPESVSYAIAL 66
Query: 70 FSGIVTLYNRTL----RFALSGQDKNTQNSSMTTTPLSSRKSRSD--------PVP-VPV 116
+GI LY R + RF S + S + ++S R++ PVP P+
Sbjct: 67 LNGI-RLYGRPINVQYRFGSSRSSEPANQSFESCVKINSHSYRNEEGASRSCFPVPFFPI 125
Query: 117 NG 118
N
Sbjct: 126 NA 127
>gi|125586872|gb|EAZ27536.1| hypothetical protein OsJ_11491 [Oryza sativa Japonica Group]
Length = 257
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L + E LY+ QAG ++ I R+K+T +P+G+ F+E+ S IA+ ++ +
Sbjct: 69 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 128
Query: 71 SG 72
+G
Sbjct: 129 NG 130
>gi|22330574|ref|NP_177325.2| cleavage stimulating factor 64 [Arabidopsis thaliana]
gi|7239507|gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit
from Xenopus laevis gb|U17394; It contains RNA
recognition motif PF|00076. ESTs gb|AI993960 and T42211
come from this gene [Arabidopsis thaliana]
gi|110738120|dbj|BAF00992.1| cleavage stimulation factor like protein [Arabidopsis thaliana]
gi|332197113|gb|AEE35234.1| cleavage stimulating factor 64 [Arabidopsis thaliana]
Length = 461
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 1 MSGNSNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESE 60
M+ +S+ V++GN+ +E L +I + G VV + D+ET KPKG+ F EY+ E
Sbjct: 1 MASSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDE 60
Query: 61 EIADYAIKLFSGIVTLYNRTLRFALSGQDKNT 92
E A A + + R LR + DK T
Sbjct: 61 ETALSARRNLQSY-EINGRQLRVDFAENDKGT 91
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+ + N+ S L ++ G++ D+YIPRD T +P+GFAFV Y + ADYA+
Sbjct: 4 LKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDRL 63
Query: 71 SGIVTLYN-RTLRF 83
G T +N R LR
Sbjct: 64 DG--TRFNGRELRI 75
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAI 67
NVYI NLD +++E+ D+ Q G + L + +D + DKP+GF FV Y + E A A+
Sbjct: 248 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKD-QNDKPRGFGFVNYANHECAQKAV 304
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
NV+I NLD + + L+D G+++ + D E KG+ FV ++S E A+ AI+
Sbjct: 155 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEH 213
Query: 70 FSGIV 74
+G++
Sbjct: 214 VNGML 218
>gi|168001864|ref|XP_001753634.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695041|gb|EDQ81386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 5 SNSGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEY-ESEEIA 63
+N +Y+G L+E V+E+V++ I G V D+ +P D+ T K +GFAF+ Y E E+ A
Sbjct: 3 TNPKTTLYVGGLEENVTEQVVHAAFIPFGDVKDISMPLDQATQKHRGFAFITYFEKEDAA 62
Query: 64 DYAIKLFSGIVTLYNRTL 81
+ +G LY R L
Sbjct: 63 AAMDNMHNG--ELYGRVL 78
>gi|213401655|ref|XP_002171600.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|211999647|gb|EEB05307.1| RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 234
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+YIGNLD+ ++E + I + G VD+++ RDKET + +GFAF++Y + A+
Sbjct: 33 IYIGNLDKSLNEHDVVRIFSEFGTPVDIHLVRDKETKESRGFAFLKYADQRSTILAVDNM 92
Query: 71 SGIVTLYNRTLR 82
+ V L++R +R
Sbjct: 93 TN-VKLHDRLVR 103
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+++G + + +++ D Q GRV+D + DK+T +P+GF FV +ESE D I +
Sbjct: 202 IFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCISI 260
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYE 58
++IG L+ + +++ L D Q G VV+ + RD T + +GF F+ ++
Sbjct: 118 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFK 165
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C +Y+G+LD ++E + + G +V + +P KE D+ KGF FVEY S E A+ A+
Sbjct: 75 CRIYVGSLDYYLTELEIKSVFQAFGTIVSVDMP--KEGDRSKGFCFVEYASPEAAEMALS 132
Query: 69 LFSGIVTLYNRTLR 82
V L RT++
Sbjct: 133 TMQNFV-LKGRTIK 145
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
VYIGN+ S L I + G ++ +P + + +G+ F+EY + + A AI+
Sbjct: 251 VYIGNVPFGFSSEDLKKIFVVFGPILSCQLLPSQENPQQHRGYGFIEYATADAAKLAIET 310
Query: 70 FSGI-VTLYNRTLRFALSGQDKNTQNSSMTTTPLSS 104
+G V + FA + +NS + TPL++
Sbjct: 311 MNGFEVAGKQLKVNFATA-----MRNSPVVATPLAA 341
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++GN+ + +E L +I + G V+ L + D+E+ KPKGF F EY+ +E A A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRF 83
+G + RTLR
Sbjct: 77 LNG-YEIGGRTLRV 89
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C V GN+ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 3 CGV--GNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 60
Query: 69 LFSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 61 NLNG-REFSGRALRVDNAASEKNKE 84
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L + E LY QAG V+ + I R+K+T +P+G+ F+E+ + +A+ ++ +
Sbjct: 72 LWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVLQNY 131
Query: 71 SG 72
+G
Sbjct: 132 NG 133
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
V++GN+ + +E L DI + G V+ + D+E+ KPKG+ F EY+ +E A +++
Sbjct: 18 VFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMRNL 77
Query: 71 SGIVTLYNRTLRFALSGQDKN 91
+G L+ R LR + ++N
Sbjct: 78 NG-RELHGRPLRVDHATSERN 97
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
C +Y+G+LD ++E + + G +V + +P KE D+ KGF FVEY S E A+ A+
Sbjct: 77 CRIYVGSLDYYLTELEIKSVFQAFGTIVSVDMP--KEGDRSKGFCFVEYASPEAAEMALS 134
Query: 69 LFSGIVTLYNRTLR 82
V L RT++
Sbjct: 135 TMQNFV-LKGRTIK 147
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDL-YIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
VYIGN+ S L I + G ++ +P + + +G+ F+EY + + A AI+
Sbjct: 274 VYIGNVPFGFSSEDLKKIFVVFGPILSCQLLPSQENPQQHRGYGFIEYATADAAKLAIET 333
Query: 70 FSGI-VTLYNRTLRFALSGQDKNTQNSSMTTTPLSS 104
+G V + FA + +NS + TPL+S
Sbjct: 334 MNGFEVAGKQLKVNFATA-----MRNSPVVGTPLAS 364
>gi|256085765|ref|XP_002579083.1| rna recognition motif containing protein [Schistosoma mansoni]
gi|360043212|emb|CCD78624.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 412
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
+++GN+ + +E L ++ +AG V+ + D+E+ KPKG+ F EY + IA A++
Sbjct: 18 IFVGNIPYEATEEKLIELFSKAGPVIGFRLVYDRESGKPKGYGFCEYNNPAIAASALRNL 77
Query: 71 SGIVTLYNRTLRFALSGQDKNTQNSSMT 98
I R LR + ++N+ +++
Sbjct: 78 QNI-EFNGRPLRIGPAAGEQNSAELALS 104
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
+V++G++ + +E L DI + G VV + D+ET KPKG+ F EY+ +E A A++
Sbjct: 17 SVFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 70 FSGIVTLYNRTLRFALSGQDKNTQ 93
+G R LR + +KN +
Sbjct: 77 LNG-REFSGRALRVDNAASEKNKE 99
>gi|68066518|ref|XP_675235.1| mRNA processing protein [Plasmodium berghei strain ANKA]
gi|56494302|emb|CAH94523.1| mRNA processing protein, putative [Plasmodium berghei]
Length = 153
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 7 SGCNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYA 66
+ C+++IGN+ +SE+ L +IL + G VV++ I D + + KGFAF EY+ E A
Sbjct: 5 NNCSLWIGNIPFDLSEKELQEILSKVGEVVNVRIKYDIDKNVSKGFAFCEYKDLETCMLA 64
Query: 67 IKLFSG 72
+K +G
Sbjct: 65 LKYLNG 70
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 9 CNVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIK 68
++YIGNL +V+E L D+ G V + IP D+ET +P+GFAFVE +E AI+
Sbjct: 1 MSIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIE 60
Query: 69 LFSG 72
G
Sbjct: 61 ALDG 64
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 11 VYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKLF 70
++IG+L V+E +Y+ Q G V + +P D++T PKGF +V++ S E A A+K
Sbjct: 296 LWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAM 355
Query: 71 SGIVTLYNRTLR--FALSGQD 89
+G + R +R FA QD
Sbjct: 356 NG-AEIAGRAIRVDFAPPKQD 375
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 10 NVYIGNLDEKVSERVLYDILIQAGRVVDLYIPRDKETDKPKGFAFVEYESEEIADYAIKL 69
++IG L+ + +E+ L + + GRVV++ + +D+ET+K +GFAFV +ES A A +
Sbjct: 9 KLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARE 68
Query: 70 FSGIV 74
+G
Sbjct: 69 LNGKA 73
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,099,515,740
Number of Sequences: 23463169
Number of extensions: 130550346
Number of successful extensions: 300424
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11473
Number of HSP's successfully gapped in prelim test: 3334
Number of HSP's that attempted gapping in prelim test: 278707
Number of HSP's gapped (non-prelim): 23153
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 72 (32.3 bits)