AmiGO: BLAST Results


BLAST match view associations BLAST with AT1G22910 AT1G22910 AT1G22910	protein from Arabidopsis thaliana	8.4e-42
BLAST match view associations BLAST with AT1G33470 AT1G33470 AT1G33470	protein from Arabidopsis thaliana	1.1e-37
BLAST match view associations BLAST with AT2G46780 AT2G46780 AT2G46780	protein from Arabidopsis thaliana	3.5e-36
BLAST match view associations BLAST with AT1G20880 AT1G20880 AT1G20880	protein from Arabidopsis thaliana	1.5e-35
BLAST match view associations BLAST with AT1G76460 AT1G76460 AT1G76460	protein from Arabidopsis thaliana	3.1e-35
BLAST match view associations BLAST with AT1G22330 AT1G22330 AT1G22330	protein from Arabidopsis thaliana	8.5e-33
BLAST match view associations BLAST with AT1G78260 AT1G78260 AT1G78260	protein from Arabidopsis thaliana	1.1e-32
BLAST match view associations BLAST with ARP1 ARP1 ARP1 AT3G54770	protein from Arabidopsis thaliana	3.1e-28
BLAST match view associations BLAST with AT5G11412 AT5G11412 AT5G11412	protein from Arabidopsis thaliana	9.7e-25
BLAST match view associations BLAST with rbm38 rbm38 rbm38 RNA binding motif protein 38	gene_product from Danio rerio	1.6e-24
BLAST match view associations BLAST with rbm24b rbm24b rbm24b RNA binding motif protein 24b	gene_product from Danio rerio	1.6e-24
BLAST match view associations BLAST with rbm24a rbm24a rbm24a RNA binding motif protein 24a	gene_product from Danio rerio	2.0e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RBM24 protein	protein from Bos taurus	2.6e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Homo sapiens	2.6e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 Uncharacterized protein	protein from Sus scrofa	2.6e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	4.2e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	4.2e-24
BLAST match view associations BLAST with rbm24-a rbm24-a rbm24-a RNA-binding protein 24-A	protein from Xenopus laevis	4.2e-24
BLAST match view associations BLAST with rbm24 rbm24 rbm24 RNA-binding protein 24	protein from Xenopus (Silurana) tropicalis	4.2e-24
BLAST match view associations BLAST with rbm24-b rbm24-b rbm24-b RNA-binding protein 24-B	protein from Xenopus laevis	4.2e-24
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	protein from Mus musculus	5.3e-24
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	gene from Rattus norvegicus	5.3e-24
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Gallus gallus	1.1e-23
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	1.4e-23
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	1.4e-23
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	protein from Mus musculus	1.8e-23
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	gene from Rattus norvegicus	1.8e-23
BLAST match view associations BLAST with sup-12 sup-12 sup-12	gene from Caenorhabditis elegans	2.3e-23
BLAST match view associations BLAST with sup-12 sup-12 sup-12 Protein SUP-12, isoform a	protein from Caenorhabditis elegans	2.3e-23
BLAST match view associations BLAST with RBM38 RBM38 RBM38 Uncharacterized protein	protein from Bos taurus	6.1e-23
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	6.1e-23
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	6.1e-23
BLAST match view associations BLAST with AT5G53680 AT5G53680 AT5G53680	protein from Arabidopsis thaliana	5.5e-22
BLAST match view associations BLAST with AT3G06970 AT3G06970 AT3G06970	protein from Arabidopsis thaliana	1.0e-20
BLAST match view associations BLAST with AT5G53720 AT5G53720 AT5G53720	protein from Arabidopsis thaliana	3.1e-19
BLAST match view associations BLAST with RBM24 RBM24 RBM24 Uncharacterized protein	protein from Canis lupus familiaris	7.5e-18
BLAST match view associations BLAST with UBA1A UBA1A UBA1A AT2G22090	protein from Arabidopsis thaliana	2.3e-15
BLAST match view associations BLAST with GRP7 GRP7 GRP7 AT2G21660	protein from Arabidopsis thaliana	4.9e-14
BLAST match view associations BLAST with AT4G26650 AT4G26650 AT4G26650	protein from Arabidopsis thaliana	5.3e-14
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ-associated protein 1	protein from Xenopus laevis	7.7e-14
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	1.3e-13
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ associated protein 1	gene_product from Danio rerio	1.4e-13
BLAST match view associations BLAST with AT3G07810 AT3G07810 AT3G07810	protein from Arabidopsis thaliana	1.7e-13
BLAST match view associations BLAST with AT5G55550 AT5G55550 AT5G55550	protein from Arabidopsis thaliana	1.9e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Bos taurus	2.2e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Gallus gallus	2.2e-13
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	gene from Rattus norvegicus	2.3e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Sus scrofa	2.3e-13
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	protein from Mus musculus	2.3e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	2.4e-13
BLAST match view associations BLAST with AT1G17640 AT1G17640 AT1G17640	protein from Arabidopsis thaliana	3.9e-13
BLAST match view associations BLAST with Rbp6 Rbp6 Rbp6 RNA-binding protein 6	protein from Drosophila melanogaster	5.0e-13
BLAST match view associations BLAST with blt801 blt801 blt801 Glycine-rich RNA-binding protein blt801	protein from Hordeum vulgare	5.6e-13
BLAST match view associations BLAST with CCR1 CCR1 CCR1 AT4G39260	protein from Arabidopsis thaliana	5.6e-13
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene_product from Danio rerio	6.3e-13
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Gallus gallus	7.1e-13
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Gallus gallus	7.1e-13
BLAST match view associations BLAST with AT3G15010 AT3G15010 AT3G15010	protein from Arabidopsis thaliana	8.2e-13
BLAST match view associations BLAST with GRP4 GRP4 GRP4 AT3G23830	protein from Arabidopsis thaliana	9.1e-13
BLAST match view associations BLAST with GR-RBP2 GR-RBP2 GR-RBP2 AT4G13850	protein from Arabidopsis thaliana	1.5e-12
BLAST match view associations BLAST with Hrb27C Hrb27C Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C	protein from Drosophila melanogaster	1.5e-12
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Xenopus (Silurana) tropicalis	2.4e-12
BLAST match view associations BLAST with cirbp-b cirbp-b cirbp-b Cold-inducible RNA-binding protein B	protein from Xenopus laevis	2.4e-12
BLAST match view associations BLAST with zgc:77052 zgc:77052 zgc:77052	gene_product from Danio rerio	2.8e-12
BLAST match view associations BLAST with msi-1 msi-1 msi-1	gene from Caenorhabditis elegans	3.2e-12
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with msi msi msi musashi	protein from Drosophila melanogaster	5.3e-12
BLAST match view associations BLAST with AT2G41060 AT2G41060 AT2G41060	protein from Arabidopsis thaliana	6.0e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with hnrnpd hnrnpd hnrnpd heterogeneous nuclear ribonucleoprotein D	gene_product from Danio rerio	6.5e-12
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Gallus gallus	7.0e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Gallus gallus	7.5e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	8.1e-12
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Rattus norvegicus	8.2e-12
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Canis lupus familiaris	8.7e-12
BLAST match view associations BLAST with UBA2A UBA2A UBA2A AT3G56860	protein from Arabidopsis thaliana	8.7e-12
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab Hnrpab-prov protein	protein from Xenopus laevis	9.3e-12
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	protein from Mus musculus	9.8e-12
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Bos taurus	1.1e-11
BLAST match view associations BLAST with hnrpdl hnrpdl hnrpdl heterogeneous nuclear ribonucleoprotein D-like	gene_product from Danio rerio	1.1e-11
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Pongo abelii	1.2e-11
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1	protein from Mus musculus	1.2e-11
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1	gene from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Sus scrofa	1.2e-11
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Bos taurus	1.3e-11
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029737
        (189 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2017779 - symbol:AT1G22910 species:3702 "Arabi...   443  8.4e-42   1
TAIR|locus:2006998 - symbol:AT1G33470 species:3702 "Arabi...   404  1.1e-37   1
TAIR|locus:2044370 - symbol:AT2G46780 species:3702 "Arabi...   390  3.5e-36   1
TAIR|locus:2037370 - symbol:AT1G20880 species:3702 "Arabi...   384  1.5e-35   1
TAIR|locus:2011726 - symbol:AT1G76460 species:3702 "Arabi...   381  3.1e-35   1
TAIR|locus:2196521 - symbol:AT1G22330 species:3702 "Arabi...   358  8.5e-33   1
TAIR|locus:2032120 - symbol:AT1G78260 species:3702 "Arabi...   357  1.1e-32   1
TAIR|locus:2102435 - symbol:ARP1 "ABA-regulated RNA-bindi...   315  3.1e-28   1
TAIR|locus:4515103555 - symbol:AT5G11412 species:3702 "Ar...   282  9.7e-25   1
ZFIN|ZDB-GENE-030131-5923 - symbol:rbm38 "RNA binding mot...   280  1.6e-24   1
ZFIN|ZDB-GENE-060312-43 - symbol:rbm24b "RNA binding moti...   280  1.6e-24   1
ZFIN|ZDB-GENE-040628-1 - symbol:rbm24a "RNA binding motif...   279  2.0e-24   1
UNIPROTKB|A6QPJ1 - symbol:RBM24 "Uncharacterized protein"...   278  2.6e-24   1
UNIPROTKB|Q9BX46 - symbol:RBM24 "RNA-binding protein 24" ...   278  2.6e-24   1
UNIPROTKB|F1RUJ2 - symbol:RBM24 "Uncharacterized protein"...   278  2.6e-24   1
UNIPROTKB|E1BZ17 - symbol:RBM24 "RNA-binding protein 24" ...   276  4.2e-24   1
UNIPROTKB|Q5ZMA3 - symbol:RBM24 "RNA-binding protein 24" ...   276  4.2e-24   1
UNIPROTKB|Q6GQD3 - symbol:rbm24-a "RNA-binding protein 24...   276  4.2e-24   1
UNIPROTKB|Q6P8A7 - symbol:rbm24 "RNA-binding protein 24" ...   276  4.2e-24   1
UNIPROTKB|Q9I8B3 - symbol:rbm24-b "RNA-binding protein 24...   276  4.2e-24   1
MGI|MGI:3610364 - symbol:Rbm24 "RNA binding motif protein...   275  5.3e-24   1
RGD|1584029 - symbol:Rbm24 "RNA binding motif protein 24"...   275  5.3e-24   1
UNIPROTKB|Q5ZJX4 - symbol:RBM38 "RNA-binding protein 38" ...   272  1.1e-23   1
UNIPROTKB|F6VZ39 - symbol:RBM38 "RNA-binding protein 38" ...   271  1.4e-23   1
UNIPROTKB|Q9H0Z9 - symbol:RBM38 "RNA-binding protein 38" ...   271  1.4e-23   1
MGI|MGI:1889294 - symbol:Rbm38 "RNA binding motif protein...   270  1.8e-23   1
RGD|1308503 - symbol:Rbm38 "RNA binding motif protein 38"...   270  1.8e-23   1
WB|WBGene00006321 - symbol:sup-12 species:6239 "Caenorhab...   269  2.3e-23   1
UNIPROTKB|O45189 - symbol:sup-12 "Protein SUP-12, isoform...   269  2.3e-23   1
UNIPROTKB|E1BLB7 - symbol:RBM38 "Uncharacterized protein"...   265  6.1e-23   1
UNIPROTKB|A5GFN7 - symbol:RNPC1 "Uncharacterized protein"...   265  6.1e-23   1
UNIPROTKB|A5GFN8 - symbol:RNPC1 "Uncharacterized protein"...   265  6.1e-23   1
TAIR|locus:2164042 - symbol:AT5G53680 species:3702 "Arabi...   256  5.5e-22   1
TAIR|locus:2077577 - symbol:AT3G06970 species:3702 "Arabi...   244  1.0e-20   1
TAIR|locus:2164082 - symbol:AT5G53720 species:3702 "Arabi...   230  3.1e-19   1
UNIPROTKB|E2RM01 - symbol:RBM24 "Uncharacterized protein"...   217  7.5e-18   1
TAIR|locus:2055956 - symbol:UBA1A species:3702 "Arabidops...   197  2.3e-15   1
TAIR|locus:2049359 - symbol:GRP7 "AT2G21660" species:3702...   181  4.9e-14   1
TAIR|locus:2133862 - symbol:AT4G26650 species:3702 "Arabi...   188  5.3e-14   1
UNIPROTKB|Q98SJ2 - symbol:dazap1 "DAZ-associated protein ...   184  7.7e-14   1
UNIPROTKB|J9P972 - symbol:DAZAP1 "Uncharacterized protein...   177  1.3e-13   1
UNIPROTKB|K7EQ02 - symbol:DAZAP1 "DAZ-associated protein ...   177  1.3e-13   1
ZFIN|ZDB-GENE-070212-1 - symbol:dazap1 "DAZ associated pr...   183  1.4e-13   1
TAIR|locus:2077392 - symbol:AT3G07810 species:3702 "Arabi...   184  1.7e-13   1
TAIR|locus:2173967 - symbol:AT5G55550 species:3702 "Arabi...   183  1.9e-13   1
UNIPROTKB|E1BAK6 - symbol:DAZAP1 "Uncharacterized protein...   181  2.2e-13   1
UNIPROTKB|F1NTG9 - symbol:DAZAP1 "Uncharacterized protein...   181  2.2e-13   1
RGD|1305280 - symbol:Dazap1 "DAZ associated protein 1" sp...   181  2.3e-13   1
UNIPROTKB|I3LB68 - symbol:DAZAP1 "Uncharacterized protein...   181  2.3e-13   1
MGI|MGI:1917498 - symbol:Dazap1 "DAZ associated protein 1...   181  2.3e-13   1
UNIPROTKB|F2Z3S1 - symbol:Dazap1 "Protein Dazap1" species...   181  2.3e-13   1
UNIPROTKB|E2R6E4 - symbol:DAZAP1 "Uncharacterized protein...   181  2.4e-13   1
UNIPROTKB|Q96EP5 - symbol:DAZAP1 "DAZ-associated protein ...   181  2.4e-13   1
TAIR|locus:2007903 - symbol:AT1G17640 species:3702 "Arabi...   178  3.9e-13   1
ASPGD|ASPL0000063757 - symbol:AN10941 species:162425 "Eme...   181  4.6e-13   1
FB|FBgn0260943 - symbol:Rbp6 "RNA-binding protein 6" spec...   177  5.0e-13   1
UNIPROTKB|Q43472 - symbol:blt801 "Glycine-rich RNA-bindin...   171  5.6e-13   1
TAIR|locus:2136298 - symbol:CCR1 "cold, circadian rhythm,...   171  5.6e-13   1
ZFIN|ZDB-GENE-030131-185 - symbol:hnrnpab "heterogeneous ...   176  6.3e-13   1
UNIPROTKB|F1NIB2 - symbol:HNRNPAB "Uncharacterized protei...   170  7.1e-13   1
UNIPROTKB|F1NIB4 - symbol:HNRNPAB "Uncharacterized protei...   170  7.1e-13   1
TAIR|locus:2086325 - symbol:AT3G15010 species:3702 "Arabi...   176  8.2e-13   1
TAIR|locus:2076096 - symbol:GRP4 "glycine-rich RNA-bindin...   169  9.1e-13   1
POMBASE|SPBC660.15 - symbol:SPBC660.15 "mRNA cleavage fac...   176  1.2e-12   1
TAIR|locus:2119495 - symbol:GR-RBP2 "AT4G13850" species:3...   167  1.5e-12   1
FB|FBgn0004838 - symbol:Hrb27C "Heterogeneous nuclear rib...   174  1.5e-12   1
UNIPROTKB|Q28IQ9 - symbol:cirbp "Cold-inducible RNA-bindi...   165  2.4e-12   1
UNIPROTKB|Q9DED4 - symbol:cirbp-b "Cold-inducible RNA-bin...   165  2.4e-12   1
ZFIN|ZDB-GENE-040426-2516 - symbol:zgc:77052 "zgc:77052" ...   168  2.8e-12   1
WB|WBGene00003423 - symbol:msi-1 species:6239 "Caenorhabd...   168  3.2e-12   1
UNIPROTKB|J3KTC1 - symbol:MSI2 "RNA-binding protein Musas...   162  5.0e-12   1
FB|FBgn0011666 - symbol:msi "musashi" species:7227 "Droso...   162  5.3e-12   2
TAIR|locus:2063177 - symbol:AT2G41060 species:3702 "Arabi...   169  6.0e-12   1
UNIPROTKB|H0YA96 - symbol:HNRNPD "Heterogeneous nuclear r...   161  6.4e-12   1
UNIPROTKB|D6RAF8 - symbol:HNRNPD "Heterogeneous nuclear r...   161  6.4e-12   1
UNIPROTKB|D6RBQ9 - symbol:HNRNPD "Heterogeneous nuclear r...   161  6.4e-12   1
UNIPROTKB|J3QKT5 - symbol:MSI2 "RNA-binding protein Musas...   161  6.4e-12   1
ZFIN|ZDB-GENE-070424-97 - symbol:hnrnpd "heterogeneous nu...   165  6.5e-12   1
UNIPROTKB|Q5ZME1 - symbol:HNRNPA2B1 "Uncharacterized prot...   166  7.0e-12   1
UNIPROTKB|F1NCW4 - symbol:HNRNPD "Uncharacterized protein...   161  7.5e-12   1
UNIPROTKB|H0Y8G5 - symbol:HNRNPD "Heterogeneous nuclear r...   161  8.1e-12   1
UNIPROTKB|F1LM82 - symbol:Hnrnpa2b1 "Heterogeneous nuclea...   164  8.2e-12   1
UNIPROTKB|F1PA19 - symbol:HNRNPAB "Uncharacterized protei...   161  8.7e-12   1
TAIR|locus:2103670 - symbol:UBA2A "UBP1-associated protei...   168  8.7e-12   1
UNIPROTKB|Q7ZYE9 - symbol:hnrnpab "Hnrpab-prov protein" s...   164  9.3e-12   1
MGI|MGI:1330294 - symbol:Hnrnpab "heterogeneous nuclear r...   162  9.8e-12   1
UNIPROTKB|Q9QX80 - symbol:Hnrnpab "Hnrpab protein" specie...   162  9.8e-12   1
UNIPROTKB|Q2HJ60 - symbol:HNRNPA2B1 "Heterogeneous nuclea...   164  1.1e-11   1
ZFIN|ZDB-GENE-040426-2717 - symbol:hnrpdl "heterogeneous ...   162  1.1e-11   1
UNIPROTKB|D6R9P3 - symbol:HNRNPAB "Heterogeneous nuclear ...   161  1.2e-11   1
RGD|69255 - symbol:Hnrnpab "heterogeneous nuclear ribonuc...   162  1.2e-11   1
UNIPROTKB|F1LNF1 - symbol:Hnrnpa2b1 "Heterogeneous nuclea...   164  1.2e-11   1
UNIPROTKB|F1Q1K6 - symbol:HNRNPA2B1 "Uncharacterized prot...   164  1.2e-11   1
UNIPROTKB|P22626 - symbol:HNRNPA2B1 "Heterogeneous nuclea...   164  1.2e-11   1
UNIPROTKB|Q5RBU8 - symbol:HNRNPA2B1 "Heterogeneous nuclea...   164  1.2e-11   1
MGI|MGI:104819 - symbol:Hnrnpa2b1 "heterogeneous nuclear ...   164  1.2e-11   1
RGD|1310403 - symbol:Hnrnpa2b1 "heterogeneous nuclear rib...   164  1.2e-11   1
UNIPROTKB|F1RX74 - symbol:HNRNPA2B1 "Uncharacterized prot...   164  1.2e-11   1
UNIPROTKB|D6RD18 - symbol:HNRNPAB "Heterogeneous nuclear ...   161  1.2e-11   1
UNIPROTKB|Q3ZC44 - symbol:HNRNPAB "Uncharacterized protei...   161  1.3e-11   1

WARNING:  Descriptions of 919 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2017779 [details] [associations]
            symbol:AT1G22910 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00523114
            RefSeq:NP_973889.1 UniGene:At.26231 ProteinModelPortal:F4I321
            SMR:F4I321 EnsemblPlants:AT1G22910.3 GeneID:838898
            KEGG:ath:AT1G22910 ArrayExpress:F4I321 Uniprot:F4I321
        Length = 347

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 84/95 (88%), Positives = 88/95 (92%)

Query:    18 GDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAA 77
             GDTTYTKVFVGGLAWET KETM+K+FEQFGEILEAVVITDKA+GRSKGYGFVTFRE EAA
Sbjct:     8 GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query:    78 MKACVDAAPVIDGRRANCNLACLGVQRSKPSTPKH 112
               ACVDA PVIDGRRANCNLA LG+QRSKPSTP H
Sbjct:    68 RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH 102


>TAIR|locus:2006998 [details] [associations]
            symbol:AT1G33470 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AK176398 IPI:IPI00533784
            RefSeq:NP_174613.2 UniGene:At.17522 UniGene:At.67846
            ProteinModelPortal:Q67YS0 SMR:Q67YS0 PaxDb:Q67YS0 PRIDE:Q67YS0
            EnsemblPlants:AT1G33470.1 GeneID:840240 KEGG:ath:AT1G33470
            TAIR:At1g33470 InParanoid:Q67YS0 OMA:GAQYPFY PhylomeDB:Q67YS0
            ProtClustDB:CLSN2680737 ArrayExpress:Q67YS0 Genevestigator:Q67YS0
            Uniprot:Q67YS0
        Length = 245

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 75/94 (79%), Positives = 84/94 (89%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TKVFVGGLAWET K ++  YFEQFG+I+EAVVITDK++GRSKGYGFVTF +PEAA 
Sbjct:     3 DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPSTPKH 112
             KACVD APVIDGRRANCNLA  GVQRSKPS+P H
Sbjct:    63 KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH 96


>TAIR|locus:2044370 [details] [associations]
            symbol:AT2G46780 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:BT022057
            IPI:IPI00944264 RefSeq:NP_182201.4 UniGene:At.22279
            ProteinModelPortal:Q501B0 SMR:Q501B0 PRIDE:Q501B0
            EnsemblPlants:AT2G46780.1 GeneID:819291 KEGG:ath:AT2G46780
            TAIR:At2g46780 OMA:FPYSTYG PhylomeDB:Q501B0 ProtClustDB:CLSN2722623
            Genevestigator:Q501B0 Uniprot:Q501B0
        Length = 336

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 72/95 (75%), Positives = 83/95 (87%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DT  TK+FVGGLAWETQ++TM +YFEQFGEI+EAVVITDK TGRSKGYGFVTF+E EAAM
Sbjct:    18 DTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAM 77

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPST-PKH 112
             +AC +  PVIDGRRANCNLACLG Q+ +P T P+H
Sbjct:    78 RACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRH 112


>TAIR|locus:2037370 [details] [associations]
            symbol:AT1G20880 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00530203 RefSeq:NP_001185049.1 RefSeq:NP_564127.1
            UniGene:At.26164 ProteinModelPortal:F4HUQ5 SMR:F4HUQ5 PRIDE:F4HUQ5
            EnsemblPlants:AT1G20880.1 EnsemblPlants:AT1G20880.2 GeneID:838681
            KEGG:ath:AT1G20880 OMA:MAYHSIP Uniprot:F4HUQ5
        Length = 274

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 71/91 (78%), Positives = 82/91 (90%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             FGDTT+TKVFVGGLAWETQ ET+ ++F+Q+G+ILEAVVITDK TGRSKGYGFVTFR+PEA
Sbjct:    18 FGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEA 77

Query:    77 AMKACVDAAPVIDGRRANCNLACLGVQRSKP 107
             A +ACVD  P+IDGRRANCNLA LG  RS+P
Sbjct:    78 ARRACVDPTPIIDGRRANCNLASLG--RSRP 106


>TAIR|locus:2011726 [details] [associations]
            symbol:AT1G76460 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0048573 "photoperiodism,
            flowering" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 UniGene:At.43912
            UniGene:At.70089 IPI:IPI00542968 RefSeq:NP_565132.2
            UniGene:At.69045 ProteinModelPortal:F4I2E4 SMR:F4I2E4 PRIDE:F4I2E4
            EnsemblPlants:AT1G76460.1 GeneID:843979 KEGG:ath:AT1G76460
            OMA:YGPEYMY Uniprot:F4I2E4
        Length = 285

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 73/107 (68%), Positives = 82/107 (76%)

Query:     4 PVSXXXXXXXXXXFGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRS 63
             PV           FGDTT+TKVFVGGLAWETQ ET+ ++FEQ+GEILEAVVI DK TGRS
Sbjct:     5 PVPGSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRS 64

Query:    64 KGYGFVTFREPEAAMKACVDAAPVIDGRRANCNLACLGVQRSKPSTP 110
             KGYGFVTFR+PEAA +AC D  P+IDGRRANCNLA LG  R +P  P
Sbjct:    65 KGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLG--RPRPPLP 109


>TAIR|locus:2196521 [details] [associations]
            symbol:AT1G22330 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:AC068562 EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HSSP:P09651 HOGENOM:HOG000276232
            ProtClustDB:CLSN2689288 IPI:IPI00540466 PIR:B86356
            RefSeq:NP_564168.2 UniGene:At.41608 ProteinModelPortal:Q9LME7
            SMR:Q9LME7 STRING:Q9LME7 PRIDE:Q9LME7 EnsemblPlants:AT1G22330.1
            GeneID:838839 KEGG:ath:AT1G22330 TAIR:At1g22330 InParanoid:Q9LME7
            OMA:TESHAPQ PhylomeDB:Q9LME7 Genevestigator:Q9LME7 Uniprot:Q9LME7
        Length = 291

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 66/95 (69%), Positives = 80/95 (84%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             FGDTT+TKVFVGGLAWET  + M +YF+QFGEILEAV+ITDKATG+SKGYGFVTFR+ ++
Sbjct:    11 FGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDS 70

Query:    77 AMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPK 111
             A +A  D  PVIDGR+ANCN+A  G  R +PSTP+
Sbjct:    71 ATRAVADPNPVIDGRKANCNIASFG--RPRPSTPR 103


>TAIR|locus:2032120 [details] [associations]
            symbol:AT1G78260 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HSSP:P09651 HOGENOM:HOG000276232 eggNOG:NOG248750 EMBL:AY084982
            EMBL:BT030002 IPI:IPI00529893 RefSeq:NP_565175.1 UniGene:At.43623
            ProteinModelPortal:Q8LF90 SMR:Q8LF90 STRING:Q8LF90
            EnsemblPlants:AT1G78260.1 GeneID:844161 KEGG:ath:AT1G78260
            TAIR:At1g78260 InParanoid:Q8LF90 OMA:SPYYYGY PhylomeDB:Q8LF90
            ProtClustDB:CLSN2689288 Genevestigator:Q8LF90 Uniprot:Q8LF90
        Length = 287

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 67/95 (70%), Positives = 78/95 (82%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             FGDTTYTKVFVGGLAWET  + M +YFEQFGEILEAV+ITDK TG+SKGYGFVTFRE ++
Sbjct:    11 FGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDS 70

Query:    77 AMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPK 111
             A +A  D  PVIDGR+ANCN+A  G  R +PS P+
Sbjct:    71 ATRAVADPNPVIDGRKANCNIASFG--RPRPSPPR 103


>TAIR|locus:2102435 [details] [associations]
            symbol:ARP1 "ABA-regulated RNA-binding protein 1"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0009414 "response to water deprivation" evidence=IMP]
            [GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
            "response to abscisic acid stimulus" evidence=IEP] [GO:0010029
            "regulation of seed germination" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GO:GO:0000166
            GO:GO:0009651 GO:GO:0009414 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0010029 EMBL:AL138650 HSSP:P11940 IPI:IPI00531276 PIR:T47636
            RefSeq:NP_191037.1 UniGene:At.20812 ProteinModelPortal:Q9M1S3
            SMR:Q9M1S3 DNASU:824642 EnsemblPlants:AT3G54770.1 GeneID:824642
            KEGG:ath:AT3G54770 TAIR:At3g54770 InParanoid:Q9M1S3 OMA:FYHFHQS
            PhylomeDB:Q9M1S3 ProtClustDB:CLSN2685114 Genevestigator:Q9M1S3
            Uniprot:Q9M1S3
        Length = 261

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 59/93 (63%), Positives = 74/93 (79%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             FGDT  TKVFVGGLAW+T KE M  +F ++G+ILEAV+I+DK T RSKGYGFVTF++ +A
Sbjct:    11 FGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKA 70

Query:    77 AMKACVDAAPVIDGRRANCNLACLGVQRSKPST 109
             A +AC D+ P+I+GRRANCNLA LG +  K  T
Sbjct:    71 ATRACEDSTPIINGRRANCNLASLGGRLRKSPT 103


>TAIR|locus:4515103555 [details] [associations]
            symbol:AT5G11412 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:DQ487706 IPI:IPI00775531 RefSeq:NP_001119208.1
            UniGene:At.69225 ProteinModelPortal:Q1G378 SMR:Q1G378 STRING:Q1G378
            EnsemblPlants:AT5G11412.1 GeneID:6240527 KEGG:ath:AT5G11412
            TAIR:At5g11412 OMA:IDGREAK PhylomeDB:Q1G378 ProtClustDB:CLSN2925591
            Genevestigator:Q1G378 Uniprot:Q1G378
        Length = 175

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 49/83 (59%), Positives = 64/83 (77%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DT YTK++VGGL WET+ E +  YFEQFG+I+   ++ D+ TGRS+GYGFVTFR+ E+A 
Sbjct:    48 DTRYTKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRDAESAT 107

Query:    79 KACVDAAPVIDGRRANCNLACLG 101
             +AC +  PVIDGR A CNLA +G
Sbjct:   108 RACQNPKPVIDGREAKCNLAYIG 130


>ZFIN|ZDB-GENE-030131-5923 [details] [associations]
            symbol:rbm38 "RNA binding motif protein 38"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030131-5923 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 HSSP:Q61474
            HOVERGEN:HBG108399 EMBL:AB097829 IPI:IPI00861911 UniGene:Dr.80564
            ProteinModelPortal:Q7T2V9 SMR:Q7T2V9 STRING:Q7T2V9
            InParanoid:Q7T2V9 Uniprot:Q7T2V9
        Length = 246

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 53/91 (58%), Positives = 67/91 (73%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    21 DTTFTKIFVGGLPYHTTDASLRKYFETFGDIDEAVVITDRQTGKSRGYGFVTMMDKSAAE 80

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPST 109
             +AC D  P+IDGR+AN NLA LG +   P T
Sbjct:    81 RACKDPNPIIDGRKANVNLAYLGAKPRSPLT 111


>ZFIN|ZDB-GENE-060312-43 [details] [associations]
            symbol:rbm24b "RNA binding motif protein 24b"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0072358 "cardiovascular system
            development" evidence=IGI] [GO:0003228 "atrial cardiac muscle
            tissue development" evidence=IMP] [GO:0003229 "ventricular cardiac
            muscle tissue development" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-060312-43 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0001947 GO:GO:0003229
            GeneTree:ENSGT00390000002308 GO:GO:0003228 EMBL:CT027645
            IPI:IPI00898048 ProteinModelPortal:E9QCG4
            Ensembl:ENSDART00000127556 Bgee:E9QCG4 Uniprot:E9QCG4
        Length = 245

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 53/85 (62%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FGEI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>ZFIN|ZDB-GENE-040628-1 [details] [associations]
            symbol:rbm24a "RNA binding motif protein 24a"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS] [GO:0043488
            "regulation of mRNA stability" evidence=ISS] [GO:0010830
            "regulation of myotube differentiation" evidence=ISS] [GO:0003228
            "atrial cardiac muscle tissue development" evidence=IMP]
            [GO:0072358 "cardiovascular system development" evidence=IGI]
            [GO:0001947 "heart looping" evidence=IMP] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040628-1 GO:GO:0005634
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003730 GO:GO:0001947 GO:GO:0043488 eggNOG:COG0724
            HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399
            EMBL:AB080735 IPI:IPI00506301 RefSeq:NP_998030.1 UniGene:Dr.159425
            ProteinModelPortal:Q76LC6 SMR:Q76LC6 STRING:Q76LC6
            Ensembl:ENSDART00000110862 GeneID:405801 KEGG:dre:405801 CTD:405801
            GeneTree:ENSGT00390000002308 OrthoDB:EOG4KWJVF NextBio:20817766
            ArrayExpress:Q76LC6 Bgee:Q76LC6 GO:GO:0003228 Uniprot:Q76LC6
        Length = 230

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 53/85 (62%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FGEI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAD 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|A6QPJ1 [details] [associations]
            symbol:RBM24 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0010830 "regulation of myotube differentiation" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            HOGENOM:HOG000276232 GO:GO:0010830 HOVERGEN:HBG108399 CTD:221662
            GeneTree:ENSGT00390000002308 OMA:LQADRMQ eggNOG:NOG248750
            EMBL:DAAA02055633 EMBL:BC149345 IPI:IPI00711385
            RefSeq:NP_001098455.1 UniGene:Bt.111570 SMR:A6QPJ1
            Ensembl:ENSBTAT00000038477 GeneID:524220 KEGG:bta:524220
            NextBio:20873922 Uniprot:A6QPJ1
        Length = 236

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/85 (62%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FGEI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q9BX46 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488
            "regulation of mRNA stability" evidence=ISS] [GO:0010830
            "regulation of myotube differentiation" evidence=ISS] [GO:0003730
            "mRNA 3'-UTR binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488 eggNOG:COG0724
            HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399
            CTD:221662 EMBL:AK055391 EMBL:AK095016 EMBL:AY547318 EMBL:AL136305
            EMBL:BC104810 EMBL:BC104808 IPI:IPI00411370 IPI:IPI00827745
            RefSeq:NP_001137413.1 RefSeq:NP_001137414.1 RefSeq:NP_694565.1
            UniGene:Hs.741190 ProteinModelPortal:Q9BX46 SMR:Q9BX46
            IntAct:Q9BX46 MINT:MINT-2879164 STRING:Q9BX46 PhosphoSite:Q9BX46
            DMDM:74761312 PRIDE:Q9BX46 Ensembl:ENST00000318204
            Ensembl:ENST00000379052 GeneID:221662 KEGG:hsa:221662
            UCSC:uc003nbz.4 UCSC:uc003nca.3 GeneCards:GC06P017281
            HGNC:HGNC:21539 neXtProt:NX_Q9BX46 PharmGKB:PA134964569
            InParanoid:Q9BX46 OMA:LQADRMQ OrthoDB:EOG4DV5NS PhylomeDB:Q9BX46
            GenomeRNAi:221662 NextBio:91409 ArrayExpress:Q9BX46 Bgee:Q9BX46
            CleanEx:HS_RBM24 Genevestigator:Q9BX46 Uniprot:Q9BX46
        Length = 236

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/85 (62%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FGEI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|F1RUJ2 [details] [associations]
            symbol:RBM24 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0010830 "regulation of myotube differentiation" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            GO:GO:0010830 GeneTree:ENSGT00390000002308 OMA:LQADRMQ
            EMBL:CU466948 Ensembl:ENSSSCT00000001161 Uniprot:F1RUJ2
        Length = 254

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 53/85 (62%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FGEI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    25 DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 84

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    85 RACKDPNPIIDGRKANVNLAYLGAK 109


>UNIPROTKB|E1BZ17 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0010830 "regulation of
            myotube differentiation" evidence=IEA] [GO:0043488 "regulation of
            mRNA stability" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488 GO:GO:0010830
            GeneTree:ENSGT00390000002308 EMBL:AADN02027548 EMBL:AADN02027547
            IPI:IPI00580084 ProteinModelPortal:E1BZ17
            Ensembl:ENSGALT00000020752 OMA:ILHRSCL Uniprot:E1BZ17
        Length = 245

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q5ZMA3 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488
            "regulation of mRNA stability" evidence=ISS] [GO:0010830
            "regulation of myotube differentiation" evidence=ISS] [GO:0003730
            "mRNA 3'-UTR binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488 eggNOG:COG0724
            GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399 EMBL:AJ719481
            IPI:IPI00971402 RefSeq:NP_001012881.1 UniGene:Gga.39322
            ProteinModelPortal:Q5ZMA3 SMR:Q5ZMA3 STRING:Q5ZMA3 GeneID:420846
            KEGG:gga:420846 CTD:221662 NextBio:20823702 Uniprot:Q5ZMA3
        Length = 225

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q6GQD3 [details] [associations]
            symbol:rbm24-a "RNA-binding protein 24-A" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0010830 "regulation of myotube differentiation" evidence=IMP]
            [GO:0043488 "regulation of mRNA stability" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            GO:GO:0010830 EMBL:AF223427 EMBL:BC072812 RefSeq:NP_001080995.1
            UniGene:Xl.12316 HSSP:Q9H0Z9 ProteinModelPortal:Q6GQD3 SMR:Q6GQD3
            GeneID:394318 KEGG:xla:394318 CTD:394318 Xenbase:XB-GENE-866276
            HOVERGEN:HBG108399 Uniprot:Q6GQD3
        Length = 225

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q6P8A7 [details] [associations]
            symbol:rbm24 "RNA-binding protein 24" species:8364 "Xenopus
            (Silurana) tropicalis" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
            evidence=ISS] [GO:0043488 "regulation of mRNA stability"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730
            GO:GO:0043488 HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9
            HOVERGEN:HBG108399 CTD:221662 OrthoDB:EOG4DV5NS EMBL:BC061322
            RefSeq:NP_989016.1 UniGene:Str.6492 ProteinModelPortal:Q6P8A7
            SMR:Q6P8A7 STRING:Q6P8A7 GeneID:394612 KEGG:xtr:394612
            Xenbase:XB-GENE-493647 eggNOG:NOG248750 InParanoid:Q6P8A7
            Bgee:Q6P8A7 Uniprot:Q6P8A7
        Length = 226

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q9I8B3 [details] [associations]
            symbol:rbm24-b "RNA-binding protein 24-B" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0010830 "regulation of myotube differentiation" evidence=ISS]
            [GO:0043488 "regulation of mRNA stability" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399 EMBL:AJ271404
            EMBL:BC044956 RefSeq:NP_001079578.1 UniGene:Xl.467
            ProteinModelPortal:Q9I8B3 SMR:Q9I8B3 GeneID:379265 KEGG:xla:379265
            CTD:379265 Xenbase:XB-GENE-6256347 Uniprot:Q9I8B3
        Length = 224

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>MGI|MGI:3610364 [details] [associations]
            symbol:Rbm24 "RNA binding motif protein 24" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:3610364 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730
            GO:GO:0043488 HOGENOM:HOG000276232 GO:GO:0010830 CTD:221662
            GeneTree:ENSGT00390000002308 OMA:LQADRMQ OrthoDB:EOG4DV5NS
            EMBL:AC124411 IPI:IPI00380986 RefSeq:NP_001074894.1
            UniGene:Mm.38269 ProteinModelPortal:D3Z4I3 SMR:D3Z4I3
            Ensembl:ENSMUST00000037923 GeneID:666794 KEGG:mmu:666794
            UCSC:uc007qhe.1 NextBio:430851 Bgee:D3Z4I3 Uniprot:D3Z4I3
        Length = 236

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>RGD|1584029 [details] [associations]
            symbol:Rbm24 "RNA binding motif protein 24" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA;ISO] [GO:0010830
            "regulation of myotube differentiation" evidence=IEA;ISO]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1584029 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003730 GO:GO:0043488 GO:GO:0010830 CTD:221662
            OrthoDB:EOG4DV5NS IPI:IPI00214952 RefSeq:NP_001178029.1
            UniGene:Rn.199020 ProteinModelPortal:D3ZLP6
            Ensembl:ENSRNOT00000022768 GeneID:690139 KEGG:rno:690139
            NextBio:740266 Uniprot:D3ZLP6
        Length = 236

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 52/85 (61%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q5ZJX4 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0005634 GO:GO:0030154
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 HOGENOM:HOG000276232 HSSP:Q9H0Z9 HOVERGEN:HBG108399
            OrthoDB:EOG4DV5NS eggNOG:NOG248750 EMBL:AJ720310 IPI:IPI00586902
            UniGene:Gga.5690 ProteinModelPortal:Q5ZJX4 SMR:Q5ZJX4
            InParanoid:Q5ZJX4 Uniprot:Q5ZJX4
        Length = 215

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|F6VZ39 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955
            HGNC:HGNC:15818 IPI:IPI00927190 ProteinModelPortal:F6VZ39
            SMR:F6VZ39 PRIDE:F6VZ39 Ensembl:ENST00000344785 ArrayExpress:F6VZ39
            Bgee:F6VZ39 Uniprot:F6VZ39
        Length = 123

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:     7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>UNIPROTKB|Q9H0Z9 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA;IDA] [GO:0010830 "regulation of myotube
            differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IEA;IDA]
            [GO:0043484 "regulation of RNA splicing" evidence=IDA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IDA] [GO:0006977 "DNA damage
            response, signal transduction by p53 class mediator resulting in
            cell cycle arrest" evidence=IDA] [GO:0006978 "DNA damage response,
            signal transduction by p53 class mediator resulting in
            transcription of p21 class mediator" evidence=IDA] [GO:0007050
            "cell cycle arrest" evidence=IDA] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IDA] [GO:0070935 "3'-UTR-mediated
            mRNA stabilization" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 GO:GO:0005634 EMBL:CH471077 GO:GO:0008285
            GO:GO:0030154 GO:GO:0006977 GO:GO:0008380 GO:GO:0000166
            GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0007050
            GO:GO:0007049 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
            eggNOG:COG0724 GO:GO:0070935 GO:GO:0010830 EMBL:AL109955
            HOVERGEN:HBG108399 EMBL:AF432218 EMBL:X75314 EMBL:X75315
            EMBL:BC018711 IPI:IPI00306057 IPI:IPI00374855 RefSeq:NP_059965.2
            RefSeq:NP_906270.1 UniGene:Hs.236361 PDB:2CQD PDBsum:2CQD
            ProteinModelPortal:Q9H0Z9 SMR:Q9H0Z9 IntAct:Q9H0Z9 STRING:Q9H0Z9
            PhosphoSite:Q9H0Z9 DMDM:215273895 PaxDb:Q9H0Z9 DNASU:55544
            Ensembl:ENST00000356208 Ensembl:ENST00000440234 GeneID:55544
            KEGG:hsa:55544 UCSC:uc010zzj.2 CTD:55544 GeneCards:GC20P055966
            H-InvDB:HIX0015939 HGNC:HGNC:15818 HPA:CAB017036 MIM:612428
            neXtProt:NX_Q9H0Z9 PharmGKB:PA34449 InParanoid:Q9H0Z9 OMA:VGYGYPA
            EvolutionaryTrace:Q9H0Z9 GenomeRNAi:55544 NextBio:59995
            ArrayExpress:Q9H0Z9 Bgee:Q9H0Z9 CleanEx:HS_RBM38
            Genevestigator:Q9H0Z9 GermOnline:ENSG00000132819 Uniprot:Q9H0Z9
        Length = 239

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 89

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    90 RACKDPNPIIDGRKANVNLAYLGAK 114


>MGI|MGI:1889294 [details] [associations]
            symbol:Rbm38 "RNA binding motif protein 38" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IMP]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005829 "cytosol" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0006977 "DNA damage response, signal transduction
            by p53 class mediator resulting in cell cycle arrest" evidence=ISO]
            [GO:0006978 "DNA damage response, signal transduction by p53 class
            mediator resulting in transcription of p21 class mediator"
            evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007050
            "cell cycle arrest" evidence=ISO] [GO:0008285 "negative regulation
            of cell proliferation" evidence=ISO] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IDA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0043484 "regulation of RNA splicing" evidence=ISO] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1889294 GO:GO:0005829 GO:GO:0005634
            GO:GO:0008285 GO:GO:0030154 GO:GO:0006977 GO:GO:0008380
            GO:GO:0000166 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0007050 EMBL:CH466551 GO:GO:0003730 GO:GO:0043484
            GO:GO:0006978 HOGENOM:HOG000276232 GO:GO:0070935 EMBL:AL928599
            GO:GO:0010830 HOVERGEN:HBG108399 GeneTree:ENSGT00390000002308
            OrthoDB:EOG4DV5NS eggNOG:NOG248750 CTD:55544 OMA:VGYGYPA
            EMBL:X75316 EMBL:AK146026 EMBL:AK162141 EMBL:AK172625 EMBL:BC085307
            IPI:IPI00122313 PIR:S38384 RefSeq:NP_062420.2 UniGene:Mm.485782
            ProteinModelPortal:Q62176 SMR:Q62176 STRING:Q62176
            PhosphoSite:Q62176 PaxDb:Q62176 PRIDE:Q62176
            Ensembl:ENSMUST00000029014 Ensembl:ENSMUST00000173393 GeneID:56190
            KEGG:mmu:56190 UCSC:uc008odh.1 InParanoid:Q5U418 ChiTaRS:RBM38
            NextBio:311992 Bgee:Q62176 CleanEx:MM_RBM38 Genevestigator:Q62176
            GermOnline:ENSMUSG00000027510 Uniprot:Q62176
        Length = 237

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    28 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAD 87

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    88 RACKDPNPIIDGRKANVNLAYLGAK 112


>RGD|1308503 [details] [associations]
            symbol:Rbm38 "RNA binding motif protein 38" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=IEA] [GO:0006978 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in transcription of p21 class mediator" evidence=IEA]
            [GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0010830
            "regulation of myotube differentiation" evidence=IEA] [GO:0043484
            "regulation of RNA splicing" evidence=IEA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1308503 GO:GO:0008285 GO:GO:0006977 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007050 GO:GO:0003730 GO:GO:0043484
            GO:GO:0006978 GO:GO:0070935 GO:GO:0010830 EMBL:CH474062
            GeneTree:ENSGT00390000002308 OrthoDB:EOG4DV5NS OMA:VGYGYPA
            IPI:IPI00190605 UniGene:Rn.17628 Ensembl:ENSRNOT00000008764
            Uniprot:D3ZGE9
        Length = 237

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    28 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAD 87

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    88 RACKDPNPIIDGRKANVNLAYLGAK 112


>WB|WBGene00006321 [details] [associations]
            symbol:sup-12 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=IMP]
            [GO:0040012 "regulation of locomotion" evidence=IGI] [GO:0032956
            "regulation of actin cytoskeleton organization" evidence=IGI]
            [GO:0016607 "nuclear speck" evidence=IDA] [GO:0036002 "pre-mRNA
            binding" evidence=IPI] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0097157 "pre-mRNA
            intronic binding" evidence=IPI] [GO:0030529 "ribonucleoprotein
            complex" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
            GO:GO:0040012 GO:GO:0030529 GO:GO:0032956 GO:GO:0097157
            GO:GO:0000380 HSSP:P09651 HOGENOM:HOG000276232
            GeneTree:ENSGT00390000002308 EMBL:FO081409 GeneID:180674
            KEGG:cel:CELE_T22B2.4 CTD:180674 PIR:T33034 RefSeq:NP_508674.1
            ProteinModelPortal:O45189 SMR:O45189 DIP:DIP-24970N IntAct:O45189
            MINT:MINT-1047167 STRING:O45189 EnsemblMetazoa:T22B2.4a
            UCSC:T22B2.4 WormBase:T22B2.4a InParanoid:O45189 OMA:DRNTQKS
            NextBio:910400 ArrayExpress:O45189 Uniprot:O45189
        Length = 248

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 52/91 (57%), Positives = 69/91 (75%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DT +TK+FVGGL + T  +T+ +YFEQFG+I EAVVITD+ T +S+GYGFVT ++  +A 
Sbjct:    31 DTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAE 90

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPST 109
             +AC D  P+IDGR+AN NLA LG   +KP T
Sbjct:    91 RACKDPNPIIDGRKANVNLAYLG---AKPRT 118


>UNIPROTKB|O45189 [details] [associations]
            symbol:sup-12 "Protein SUP-12, isoform a" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0016607
            Gene3D:3.30.70.330 GO:GO:0040012 GO:GO:0030529 GO:GO:0032956
            GO:GO:0097157 GO:GO:0000380 HSSP:P09651 HOGENOM:HOG000276232
            GeneTree:ENSGT00390000002308 EMBL:FO081409 GeneID:180674
            KEGG:cel:CELE_T22B2.4 CTD:180674 PIR:T33034 RefSeq:NP_508674.1
            ProteinModelPortal:O45189 SMR:O45189 DIP:DIP-24970N IntAct:O45189
            MINT:MINT-1047167 STRING:O45189 EnsemblMetazoa:T22B2.4a
            UCSC:T22B2.4 WormBase:T22B2.4a InParanoid:O45189 OMA:DRNTQKS
            NextBio:910400 ArrayExpress:O45189 Uniprot:O45189
        Length = 248

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 52/91 (57%), Positives = 69/91 (75%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DT +TK+FVGGL + T  +T+ +YFEQFG+I EAVVITD+ T +S+GYGFVT ++  +A 
Sbjct:    31 DTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAE 90

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPST 109
             +AC D  P+IDGR+AN NLA LG   +KP T
Sbjct:    91 RACKDPNPIIDGRKANVNLAYLG---AKPRT 118


>UNIPROTKB|E1BLB7 [details] [associations]
            symbol:RBM38 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0043484 "regulation of RNA splicing"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0007050 "cell cycle arrest"
            evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
            by p53 class mediator resulting in transcription of p21 class
            mediator" evidence=IEA] [GO:0006977 "DNA damage response, signal
            transduction by p53 class mediator resulting in cell cycle arrest"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008285 GO:GO:0006977 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007050 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
            GO:GO:0070935 GO:GO:0010830 GeneTree:ENSGT00390000002308 CTD:55544
            OMA:VGYGYPA EMBL:DAAA02036351 IPI:IPI00696591 RefSeq:NP_001192952.1
            UniGene:Bt.106613 ProteinModelPortal:E1BLB7
            Ensembl:ENSBTAT00000010660 GeneID:533516 KEGG:bta:533516
            NextBio:20876057 Uniprot:E1BLB7
        Length = 239

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/85 (60%), Positives = 64/85 (75%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 89

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P IDGR+AN NLA LG +
Sbjct:    90 RACKDPNPNIDGRKANVNLAYLGAK 114


>UNIPROTKB|A5GFN7 [details] [associations]
            symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:CR956362 HOVERGEN:HBG108399
            GeneTree:ENSGT00390000002308 UniGene:Ssc.29738
            ProteinModelPortal:A5GFN7 STRING:A5GFN7 Ensembl:ENSSSCT00000033672
            ArrayExpress:A5GFN7 Uniprot:A5GFN7
        Length = 193

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/85 (60%), Positives = 64/85 (75%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 89

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P IDGR+AN NLA LG +
Sbjct:    90 RACKDPNPNIDGRKANVNLAYLGAK 114


>UNIPROTKB|A5GFN8 [details] [associations]
            symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0043484 "regulation of RNA splicing"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0007050 "cell cycle arrest"
            evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
            by p53 class mediator resulting in transcription of p21 class
            mediator" evidence=IEA] [GO:0006977 "DNA damage response, signal
            transduction by p53 class mediator resulting in cell cycle arrest"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008285 GO:GO:0006977 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007050 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
            HOGENOM:HOG000276232 GO:GO:0070935 GO:GO:0010830 EMBL:CR956362
            HOVERGEN:HBG108399 GeneTree:ENSGT00390000002308 OrthoDB:EOG4DV5NS
            CTD:55544 OMA:VGYGYPA UniGene:Ssc.29738 RefSeq:NP_001098782.1
            SMR:A5GFN8 STRING:A5GFN8 Ensembl:ENSSSCT00000008216
            GeneID:100125973 KEGG:ssc:100125973 Uniprot:A5GFN8
        Length = 239

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/85 (60%), Positives = 64/85 (75%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct:    30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 89

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P IDGR+AN NLA LG +
Sbjct:    90 RACKDPNPNIDGRKANVNLAYLGAK 114


>TAIR|locus:2164042 [details] [associations]
            symbol:AT5G53680 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] [GO:0006457 "protein folding"
            evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 EMBL:AB017066
            HSSP:Q61474 IPI:IPI00517619 RefSeq:NP_200179.1 UniGene:At.55530
            ProteinModelPortal:Q9FI08 SMR:Q9FI08 EnsemblPlants:AT5G53680.1
            GeneID:835449 KEGG:ath:AT5G53680 TAIR:At5g53680
            HOGENOM:HOG000152479 InParanoid:Q9FI08 PhylomeDB:Q9FI08
            ProtClustDB:CLSN2916322 Genevestigator:Q9FI08 Uniprot:Q9FI08
        Length = 169

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 46/90 (51%), Positives = 66/90 (73%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTT+TK++VGGL W T+KE +  +F++FGEI+   V+ D+ T RS+GYGFVTF++ E+A 
Sbjct:     9 DTTFTKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESAT 68

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPS 108
             +AC D  P I+GR  NC LA +G  + KP+
Sbjct:    69 RACKDPNPTIEGRITNCKLAFVGA-KVKPN 97


>TAIR|locus:2077577 [details] [associations]
            symbol:AT3G06970 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:DQ446643 IPI:IPI00542567
            RefSeq:NP_187353.2 UniGene:At.53209 ProteinModelPortal:Q1PES4
            SMR:Q1PES4 EnsemblPlants:AT3G06970.1 GeneID:819882
            KEGG:ath:AT3G06970 TAIR:At3g06970 eggNOG:NOG252859
            HOGENOM:HOG000124795 InParanoid:Q1PES4 OMA:TNCNLAS
            ProtClustDB:CLSN2920257 Genevestigator:Q1PES4 Uniprot:Q1PES4
        Length = 317

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 41/87 (47%), Positives = 63/87 (72%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DT  TK+FVG L W T  + + +YFEQFG++++A V+++   GRSKGYGF+TFR+  + +
Sbjct:     8 DTRVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVSTV 67

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRS 105
             +A  ++ P+IDGR  NCNLA  G +++
Sbjct:    68 RALQNSKPIIDGRTTNCNLASAGAKQN 94


>TAIR|locus:2164082 [details] [associations]
            symbol:AT5G53720 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:AB017066
            HSSP:Q61474 IPI:IPI00526229 RefSeq:NP_200183.1 UniGene:At.55532
            ProteinModelPortal:Q9FI04 SMR:Q9FI04 EnsemblPlants:AT5G53720.1
            GeneID:835453 KEGG:ath:AT5G53720 TAIR:At5g53720 eggNOG:NOG297705
            InParanoid:Q9FI04 OMA:ATRACEN PhylomeDB:Q9FI04
            ProtClustDB:CLSN2916326 Genevestigator:Q9FI04 Uniprot:Q9FI04
        Length = 100

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 45/81 (55%), Positives = 57/81 (70%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             TK++V GL W T+ E +  YFE+FGEI+ A V+ D AT RSKG+GFVTFRE E+A +AC 
Sbjct:     9 TKIYVAGLPWITRTEGLISYFERFGEIVYAKVVCDGATQRSKGFGFVTFREVESATRACE 68

Query:    83 DAAPVIDGRRANCNLACLGVQ 103
             +    IDGR  NC LA LG +
Sbjct:    69 NPNHTIDGRTVNCKLAYLGAR 89


>UNIPROTKB|E2RM01 [details] [associations]
            symbol:RBM24 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00390000002308 EMBL:AAEX03017572 EMBL:AAEX03017571
            Ensembl:ENSCAFT00000015807 Uniprot:E2RM01
        Length = 116

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 45/85 (52%), Positives = 54/85 (63%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             DTTYTK+FVGGL + T   ++ KYFE FGEI EAVVIT            VT  +  AA 
Sbjct:     7 DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITXXXXXXXXXVAKVTMADRAAAE 66

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
             +AC D  P+IDGR+AN NLA LG +
Sbjct:    67 RACKDPNPIIDGRKANVNLAYLGAK 91


>TAIR|locus:2055956 [details] [associations]
            symbol:UBA1A species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0017091 "AU-rich
            element binding" evidence=IDA] [GO:0048255 "mRNA stabilization"
            evidence=NAS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:CP002685
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0048255
            IPI:IPI00520548 RefSeq:NP_850021.1 UniGene:At.25483
            ProteinModelPortal:F4IIL5 SMR:F4IIL5 EnsemblPlants:AT2G22090.2
            GeneID:816744 KEGG:ath:AT2G22090 OMA:WETTRET Uniprot:F4IIL5
        Length = 347

 Score = 197 (74.4 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 39/83 (46%), Positives = 53/83 (63%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D T+ K+FV GL WET +ET+   FE +GEI E  V+ DKATG++KG+GFV F+  + A 
Sbjct:   100 DVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAK 159

Query:    79 KACVDAAPVIDGRRANCNLACLG 101
             +A  +    I  R A C LA +G
Sbjct:   160 EALKEPKKRILNRTATCQLASMG 182


>TAIR|locus:2049359 [details] [associations]
            symbol:GRP7 "AT2G21660" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0009409 "response
            to cold" evidence=IGI;IEP] [GO:0009414 "response to water
            deprivation" evidence=IEP] [GO:0009651 "response to salt stress"
            evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
            evidence=IEP;RCA] [GO:0010501 "RNA secondary structure unwinding"
            evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IDA]
            [GO:0045087 "innate immune response" evidence=IMP;IDA] [GO:0005777
            "peroxisome" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
            evidence=IMP] [GO:0006970 "response to osmotic stress"
            evidence=IMP] [GO:0010119 "regulation of stomatal movement"
            evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA;IMP] [GO:0010043 "response to zinc ion" evidence=IEP]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0006094
            "gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0006833 "water transport" evidence=RCA]
            [GO:0006972 "hyperosmotic response" evidence=RCA] [GO:0007030
            "Golgi organization" evidence=RCA] [GO:0007623 "circadian rhythm"
            evidence=IEP;RCA;TAS] [GO:0009266 "response to temperature
            stimulus" evidence=RCA] [GO:0000380 "alternative mRNA splicing, via
            spliceosome" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0009506 GO:GO:0005634
            GO:GO:0009507 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0005777 GO:GO:0010119 GO:GO:0000166 GO:GO:0010043
            GO:GO:0048046 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0003690
            GO:GO:0003697 GO:GO:0006406 GO:GO:0010228 eggNOG:COG0724
            GO:GO:0000380 HOGENOM:HOG000276232 GO:GO:0010501 GO:GO:0032508
            EMBL:AC007119 UniGene:At.22672 UniGene:At.23628 EMBL:Z14987
            EMBL:L00648 EMBL:L04172 EMBL:AF428381 EMBL:AY054284 EMBL:AY042826
            EMBL:AY072523 EMBL:AK318968 EMBL:AY085214 IPI:IPI00523161
            IPI:IPI00542675 PIR:S30147 RefSeq:NP_179760.1 UniGene:At.24279
            UniGene:At.72988 ProteinModelPortal:Q03250 SMR:Q03250 IntAct:Q03250
            MINT:MINT-1163877 STRING:Q03250 PaxDb:Q03250 PRIDE:Q03250
            ProMEX:Q03250 EnsemblPlants:AT2G21660.1 GeneID:816705
            KEGG:ath:AT2G21660 TAIR:At2g21660 InParanoid:Q03250 OMA:SQHEDGH
            ProtClustDB:CLSN2913158 Genevestigator:Q03250 Uniprot:Q03250
        Length = 176

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 36/83 (43%), Positives = 53/83 (63%)

Query:    18 GDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAA 77
             GD  Y + FVGGLAW T    +E  F Q+G+++++ +I D+ TGRS+G+GFVTF++ E A
Sbjct:     4 GDVEY-RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKD-EKA 61

Query:    78 MKACVDA--APVIDGRRANCNLA 98
             MK  ++      +DGR    N A
Sbjct:    62 MKDAIEGMNGQDLDGRSITVNEA 84


>TAIR|locus:2133862 [details] [associations]
            symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
            metabolic process" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
            RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
            ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
            EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
            TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
            ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
        Length = 455

 Score = 188 (71.2 bits), Expect = 5.3e-14, P = 5.3e-14
 Identities = 29/75 (38%), Positives = 54/75 (72%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GG++W+T +E +++YF ++G+++EAV++ D+ TGR++G+GF+ F +P  A +  +D
Sbjct:    16 KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 75

Query:    84 AAPVIDGRRANCNLA 98
                +IDGR      A
Sbjct:    76 KH-IIDGRTVEAKKA 89

 Score = 122 (48.0 bits), Expect = 7.5e-07, P = 7.5e-07
 Identities = 24/59 (40%), Positives = 34/59 (57%)

Query:    18 GDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             G     K+FVGGL     +   + YF+QFG I + VV+ D  T R +G+GF+TF   E+
Sbjct:   117 GGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEES 175


>UNIPROTKB|Q98SJ2 [details] [associations]
            symbol:dazap1 "DAZ-associated protein 1" species:8355
            "Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
            CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
            RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
            SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
            Uniprot:Q98SJ2
        Length = 360

 Score = 184 (69.8 bits), Expect = 7.7e-14, P = 7.7e-14
 Identities = 33/87 (37%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +RS+P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERSRP 97

 Score = 115 (45.5 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  +++YF +FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   115 KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 171


>UNIPROTKB|J9P972 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
            Ensembl:ENSCAFT00000049246 Uniprot:J9P972
        Length = 258

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 29/68 (42%), Positives = 44/68 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    56 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 115

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   116 RPHTLDGR 123

 Score = 115 (45.5 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   141 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 197


>UNIPROTKB|K7EQ02 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
            Ensembl:ENST00000592453 Uniprot:K7EQ02
        Length = 225

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 29/68 (42%), Positives = 44/68 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:    71 RPHTLDGR 78

 Score = 115 (45.5 bits), Expect = 9.9e-07, P = 9.9e-07
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:    92 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 148


>ZFIN|ZDB-GENE-070212-1 [details] [associations]
            symbol:dazap1 "DAZ associated protein 1" species:7955
            "Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
            EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
            Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
        Length = 407

 Score = 183 (69.5 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 36/89 (40%), Positives = 57/89 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK+T +S+G+GFV F++P   ++  +D
Sbjct:    12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNC-VRTVLD 70

Query:    84 AAPV-IDGRRANCNLACL--GVQRSKPST 109
               P  +DGR  +    C   G+Q  K  T
Sbjct:    71 TKPHNLDGRNIDPK-PCTPRGMQPEKTRT 98

 Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/60 (36%), Positives = 35/60 (58%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG+     +  +  YF +FG + E V+I D    R +G+GF+TF E E ++   V+
Sbjct:   114 KIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITF-EAEQSVDQAVN 172


>TAIR|locus:2077392 [details] [associations]
            symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
            ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
            EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
            OMA:YYIGNTN Uniprot:F4JFN7
        Length = 495

 Score = 184 (69.8 bits), Expect = 1.7e-13, P = 1.7e-13
 Identities = 30/68 (44%), Positives = 50/68 (73%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GG++W+T +E +++YF  FGE++EAV++ D+ TGR++G+GFV F +P  A +  + 
Sbjct:     7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA-EIVIT 65

Query:    84 AAPVIDGR 91
                 IDGR
Sbjct:    66 EKHNIDGR 73

 Score = 127 (49.8 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 25/68 (36%), Positives = 38/68 (55%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL     +   + YFEQFG   + VV+ D  T R +G+GF+T+   EA  K  + 
Sbjct:   109 KIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLK 168

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   169 TFHELNGK 176


>TAIR|locus:2173967 [details] [associations]
            symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
            EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
            UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
            EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
            KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
            PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
        Length = 460

 Score = 183 (69.5 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 29/75 (38%), Positives = 52/75 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GG++W+T +E +  YF  +G+++EAV++ D+ATGR++G+GF+ F +P  + +  +D
Sbjct:     7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66

Query:    84 AAPVIDGRRANCNLA 98
                +IDGR      A
Sbjct:    67 KH-IIDGRTVEAKKA 80

 Score = 127 (49.8 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 24/53 (45%), Positives = 34/53 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             K+FVGGL     +E  + YF+QFG I + VV+ D  T R +G+GF+TF   +A
Sbjct:   111 KIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDA 163


>UNIPROTKB|E1BAK6 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
            EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
            Uniprot:E1BAK6
        Length = 396

 Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:     1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    61 RPHTLDGRNIDPKPCTPRGMQPERTRP 87

 Score = 115 (45.5 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   104 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 160


>UNIPROTKB|F1NTG9 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
            Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
        Length = 398

 Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:     1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    61 RPHTLDGRNIDPKPCTPRGMQPERTRP 87

 Score = 115 (45.5 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   104 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 160


>RGD|1305280 [details] [associations]
            symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
            norvegicus" [GO:0001893 "maternal placenta development"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
            evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
            CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
            RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
            KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
            Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
        Length = 405

 Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRP 97

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 169


>UNIPROTKB|I3LB68 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
            UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
            KEGG:ssc:100625005 Uniprot:I3LB68
        Length = 406

 Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRP 97

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170


>MGI|MGI:1917498 [details] [associations]
            symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001893 "maternal placenta development" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
            CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
            IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
            RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
            SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
            REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
            Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
            KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
            GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
            Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
            GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
        Length = 406

 Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRP 97

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170


>UNIPROTKB|F2Z3S1 [details] [associations]
            symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 IPI:IPI00365961
            ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
            Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
        Length = 406

 Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRP 97

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170


>UNIPROTKB|E2R6E4 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
            RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
            KEGG:cfa:100683271 Uniprot:E2R6E4
        Length = 407

 Score = 181 (68.8 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRP 97

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170


>UNIPROTKB|Q96EP5 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
            EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
            RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
            PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
            STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
            REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
            DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
            GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
            CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
            HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
            OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
            EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
            ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
            Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
        Length = 407

 Score = 181 (68.8 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 32/87 (36%), Positives = 52/87 (59%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL W T +ET+  YF Q+GE+++ V++ DK T +S+G+GFV F++P         
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query:    84 AAPVIDGRRAN---CNLACLGVQRSKP 107
                 +DGR  +   C    +  +R++P
Sbjct:    71 RPHTLDGRNIDPKPCTPRGMQPERTRP 97

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 20/57 (35%), Positives = 36/57 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGG+     +  + +YF++FG + E V+I D    R +G+GF+TF + ++  +A
Sbjct:   114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170


>TAIR|locus:2007903 [details] [associations]
            symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
            UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
            EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
            Uniprot:F4I906
        Length = 369

 Score = 178 (67.7 bits), Expect = 3.9e-13, P = 3.9e-13
 Identities = 32/71 (45%), Positives = 50/71 (70%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG++WET  ET   YF +FGE++++V++TD+ TG  +G+GFVTF +   A K  ++
Sbjct:    67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKV-LE 125

Query:    84 AAPVIDGRRAN 94
                VID R+ +
Sbjct:   126 EDHVIDDRKVD 136

 Score = 122 (48.0 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 22/53 (41%), Positives = 38/53 (71%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             K+FVGGL    +++ ++ YF  +G+I+E  ++ D  TGRS+G+GFVTF+  ++
Sbjct:   158 KIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDS 210


>ASPGD|ASPL0000063757 [details] [associations]
            symbol:AN10941 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 EMBL:BN001304 ProteinModelPortal:C8VBB9
            EnsemblFungi:CADANIAT00000536 HOGENOM:HOG000162494 OMA:MNPAMMQ
            Uniprot:C8VBB9
        Length = 559

 Score = 181 (68.8 bits), Expect = 4.6e-13, P = 4.6e-13
 Identities = 33/74 (44%), Positives = 50/74 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL WET  +++++YF QFGE+ E  V+ D ATGRS+G+GF+TF++P+      V 
Sbjct:   111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170

Query:    84 A----APVIDGRRA 93
                    +ID +RA
Sbjct:   171 EHYLDGKIIDPKRA 184

 Score = 150 (57.9 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 28/69 (40%), Positives = 49/69 (71%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             +K+FVGG++ E  ++  +++F QFG +++A ++ DK TGR +G+GFVTF + EAA++A +
Sbjct:   194 SKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTF-DSEAAVEAAL 252

Query:    83 DAAPVIDGR 91
                  I G+
Sbjct:   253 SRPLEILGK 261


>FB|FBgn0260943 [details] [associations]
            symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
            GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
            RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
            UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
            DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
            EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
            UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
            OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
            Uniprot:Q9VVE5
        Length = 369

 Score = 177 (67.4 bits), Expect = 5.0e-13, P = 5.0e-13
 Identities = 30/75 (40%), Positives = 50/75 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T  E++  YF ++G+I EA+V+ D  T RS+G+GFVTF +P +  K    
Sbjct:    30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89

Query:    84 AAPVIDGRRANCNLA 98
                 +DG++ +  +A
Sbjct:    90 GTHELDGKKVDPKVA 104

 Score = 156 (60.0 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 32/79 (40%), Positives = 46/79 (58%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E ++ YFEQFG I +A+++ DK T R +G+GFVTF+  +   K
Sbjct:   115 TRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDK 174

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   175 VCEIHFHEINNKMVECKKA 193


>UNIPROTKB|Q43472 [details] [associations]
            symbol:blt801 "Glycine-rich RNA-binding protein blt801"
            species:4513 "Hordeum vulgare" [GO:0003697 "single-stranded DNA
            binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0009409 "response to cold" evidence=IDA] [GO:0009737 "response
            to abscisic acid stimulus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0003697
            EMBL:U49482 PIR:S71453 HSSP:P11940 ProteinModelPortal:Q43472
            Gramene:Q43472 Genevestigator:Q43472 Uniprot:Q43472
        Length = 161

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 33/82 (40%), Positives = 53/82 (64%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D  Y + FVGGL W T  ++++  F ++G+++++ +ITD+ TGRS+G+GFVTF   EA M
Sbjct:     3 DVEY-RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEA-M 60

Query:    79 KACVDA--APVIDGRRANCNLA 98
             +  ++A     +DGR    N A
Sbjct:    61 RQAIEAMNGQDLDGRNITVNEA 82


>TAIR|locus:2136298 [details] [associations]
            symbol:CCR1 "cold, circadian rhythm, and RNA binding 1"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0005618 "cell wall" evidence=IDA]
            [GO:0045087 "innate immune response" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009651 "response to salt
            stress" evidence=IEP] [GO:0005777 "peroxisome" evidence=IDA]
            [GO:0010043 "response to zinc ion" evidence=IEP] [GO:0009737
            "response to abscisic acid stimulus" evidence=IDA] [GO:0005829
            "cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0048046 "apoplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0007623 "circadian rhythm" evidence=RCA]
            [GO:0000380 "alternative mRNA splicing, via spliceosome"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005886 GO:GO:0009506
            GO:GO:0009737 GO:GO:0005794 GO:GO:0005618 GO:GO:0009507
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0005777
            GO:GO:0000166 GO:GO:0010043 GO:GO:0048046 GO:GO:0009651
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0003723
            EMBL:AL161594 eggNOG:COG0724 EMBL:AL050351 GO:GO:0000380
            HOGENOM:HOG000276232 UniGene:At.23968 ProtClustDB:CLSN2913158
            EMBL:Z14988 EMBL:L00649 EMBL:L04171 EMBL:AY034997 EMBL:AY063005
            IPI:IPI00520057 IPI:IPI00526742 PIR:S30148 RefSeq:NP_195637.1
            ProteinModelPortal:Q03251 SMR:Q03251 MINT:MINT-1163792
            STRING:Q03251 PaxDb:Q03251 PRIDE:Q03251 ProMEX:Q03251
            EnsemblPlants:AT4G39260.1 GeneID:830082 KEGG:ath:AT4G39260
            TAIR:At4g39260 InParanoid:Q03251 OMA:GNNSGGY Genevestigator:Q03251
            Uniprot:Q03251
        Length = 169

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 32/77 (41%), Positives = 52/77 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             + FVGGLAW T  E +++ F QFG+++++ +I D+ +GRS+G+GFVTF++ E AM+  ++
Sbjct:     7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKD-EKAMRDAIE 65

Query:    84 A--APVIDGRRANCNLA 98
                   +DGR    N A
Sbjct:    66 EMNGKELDGRVITVNEA 82


>ZFIN|ZDB-GENE-030131-185 [details] [associations]
            symbol:hnrnpab "heterogeneous nuclear
            ribonucleoprotein A/B" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-185
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
            EMBL:CU658205 IPI:IPI01023938 Ensembl:ENSDART00000148447
            ArrayExpress:F8W4E3 Uniprot:F8W4E3
        Length = 366

 Score = 176 (67.0 bits), Expect = 6.3e-13, P = 6.3e-13
 Identities = 30/75 (40%), Positives = 47/75 (62%)

Query:    18 GDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAA 77
             G+    K+FVGGL+W+T K+ ++ YF +FGE+ +  +  D  TGRS+G+GF+ F+EP   
Sbjct:    90 GEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEPSGV 149

Query:    78 MKACVDAAPVIDGRR 92
              K        +DGR+
Sbjct:   150 DKVLAQKEHRLDGRQ 164

 Score = 118 (46.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 24/56 (42%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL  ET +E + +YF  FGEI    +  D  + + +G+ F+TF+E EA  K
Sbjct:   180 KIFVGGLNPETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKK 235


>UNIPROTKB|F1NIB2 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            GeneTree:ENSGT00700000104347 OMA:FILFKDP EMBL:AADN02028501
            EMBL:AADN02028502 EMBL:AADN02028503 IPI:IPI00574172
            Ensembl:ENSGALT00000023234 ArrayExpress:F1NIB2 Uniprot:F1NIB2
        Length = 263

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 29/68 (42%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+ +  +  D  TGRS+G+GF+ F+EP +  K    
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:    61 KEHRLDGR 68

 Score = 117 (46.2 bits), Expect = 9.2e-07, P = 9.2e-07
 Identities = 26/76 (34%), Positives = 42/76 (55%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D  T + +G+ F+TF+E +   K   
Sbjct:    85 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 143

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   144 KKFHNVSGSKCEIKVA 159


>UNIPROTKB|F1NIB4 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
            EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
            Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
        Length = 212

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 29/68 (42%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+ +  +  D  TGRS+G+GF+ F+EP +  K    
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:    61 KEHRLDGR 68

 Score = 117 (46.2 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 26/76 (34%), Positives = 42/76 (55%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D  T + +G+ F+TF+E +   K   
Sbjct:    85 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 143

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   144 KKFHNVSGSKCEIKVA 159


>TAIR|locus:2086325 [details] [associations]
            symbol:AT3G15010 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006952 "defense response" evidence=IMP]
            [GO:0008219 "cell death" evidence=IMP] [GO:0009693 "ethylene
            biosynthetic process" evidence=IMP] [GO:0010150 "leaf senescence"
            evidence=IMP] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009693
            GO:GO:0006952 GO:GO:0005730 GO:GO:0000166 GO:GO:0008219
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0010150 EMBL:AP000370
            HSSP:P09651 KO:K12741 eggNOG:NOG300400 EMBL:AY063846 EMBL:AY091228
            EMBL:AK316731 IPI:IPI00519744 RefSeq:NP_188119.1 RefSeq:NP_974317.1
            UniGene:At.27179 ProteinModelPortal:Q9LKA4 SMR:Q9LKA4 IntAct:Q9LKA4
            PaxDb:Q9LKA4 PRIDE:Q9LKA4 EnsemblPlants:AT3G15010.1
            EnsemblPlants:AT3G15010.2 GeneID:820730 KEGG:ath:AT3G15010
            TAIR:At3g15010 HOGENOM:HOG000090575 InParanoid:Q9LKA4 OMA:MGAQYGG
            PhylomeDB:Q9LKA4 ProtClustDB:CLSN2685088 ArrayExpress:Q9LKA4
            Genevestigator:Q9LKA4 Uniprot:Q9LKA4
        Length = 404

 Score = 176 (67.0 bits), Expect = 8.2e-13, P = 8.2e-13
 Identities = 37/85 (43%), Positives = 51/85 (60%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D +  K+F+ GLA +T  E +   F  +G++ EA+VI DK TG+SKGYGFVTF   + A+
Sbjct:    71 DISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGAL 130

Query:    79 KACVDAAPVIDGRRANCNLACLGVQ 103
              A  + +  IDGR     LA  G Q
Sbjct:   131 LALKEPSKKIDGRVTVTQLAASGNQ 155

 Score = 151 (58.2 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 29/110 (26%), Positives = 53/110 (48%)

Query:     2 MTPVSXXXXXXXXXXFGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATG 61
             +T ++            D +  K++V  + ++   + +  +F  +G++ E  +  DK TG
Sbjct:   146 VTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTG 205

Query:    62 RSKGYGFVTFREPEAAMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPK 111
             +S+G+    ++  E A  A  D   VIDG+  NC LA  G +  KP  P+
Sbjct:   206 KSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQ 255


>TAIR|locus:2076096 [details] [associations]
            symbol:GRP4 "glycine-rich RNA-binding protein 4"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
            cell wall organization" evidence=RCA] [GO:0042545 "cell wall
            modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
            eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
            ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
            IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
            UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
            PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
            EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
            GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
            PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
        Length = 136

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 37/97 (38%), Positives = 55/97 (56%)

Query:     5 VSXXXXXXXXXXFGDTTY--TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGR 62
             VS           G   Y  +K+FVGGL+W T   ++++ F  FGE+ EA VI D+ TGR
Sbjct:    15 VSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGR 74

Query:    63 SKGYGFVTFREPEAAMKACVDA-APVIDGRRANCNLA 98
             S+G+GFV+F   ++A  A  +     ++GR+   NLA
Sbjct:    75 SRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLA 111


>POMBASE|SPBC660.15 [details] [associations]
            symbol:SPBC660.15 "mRNA cleavage factor complex subunit
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
            complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
            evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
            EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
            eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
            OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
            ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
            EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
            OMA:CHKANDG NextBio:20802263 Uniprot:O94432
        Length = 474

 Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 28/52 (53%), Positives = 41/52 (78%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPE 75
             K+F+GGL WET  +++  YFEQFGE+L+  V+ D  TGRS+G+GF+TF+ P+
Sbjct:   164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPK 215

 Score = 141 (54.7 bits), Expect = 7.1e-09, P = 7.1e-09
 Identities = 28/65 (43%), Positives = 45/65 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG+  +  +E    +F QFG +L+A ++ DK TGR +G+GFVT+ E E+A++A + 
Sbjct:   248 KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTY-ENESAVEATM- 305

Query:    84 AAPVI 88
             + P I
Sbjct:   306 SQPYI 310


>TAIR|locus:2119495 [details] [associations]
            symbol:GR-RBP2 "AT4G13850" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0009409 "response to cold"
            evidence=IGI;IEP;IMP] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0001072
            "RNA binding transcription antitermination factor activity"
            evidence=IDA] [GO:0006970 "response to osmotic stress"
            evidence=IMP] [GO:0009631 "cold acclimation" evidence=IMP]
            [GO:0009651 "response to salt stress" evidence=IMP] [GO:0009845
            "seed germination" evidence=IMP] [GO:0031564 "transcription
            antitermination" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
            [GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0005507 GO:GO:0003723
            GO:GO:0006970 GO:GO:0009845 GO:GO:0003690 GO:GO:0003697
            eggNOG:COG0724 EMBL:AL035528 EMBL:AL161537 HOGENOM:HOG000276232
            EMBL:AJ002892 EMBL:AY072361 EMBL:BT002197 EMBL:AY085621 EMBL:X69377
            EMBL:Z18189 IPI:IPI00527583 PIR:S31443 PIR:T05254
            RefSeq:NP_193121.1 UniGene:At.15585 UniGene:At.2
            ProteinModelPortal:Q9SVM8 SMR:Q9SVM8 IntAct:Q9SVM8 STRING:Q9SVM8
            PaxDb:Q9SVM8 PRIDE:Q9SVM8 ProMEX:Q9SVM8 EnsemblPlants:AT4G13850.1
            GeneID:827019 KEGG:ath:AT4G13850 GeneFarm:3949 TAIR:At4g13850
            InParanoid:Q9SVM8 OMA:ISEMDGK PhylomeDB:Q9SVM8 ProtClustDB:PLN03134
            Genevestigator:Q9SVM8 Uniprot:Q9SVM8
        Length = 158

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 33/89 (37%), Positives = 52/89 (58%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             TK+F+GGL+W T   ++   F  FG++++A VI D+ TGRS+G+GFV F +  AA  A  
Sbjct:    35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94

Query:    83 DAAPVIDGRRANCNLACLGVQRSKPSTPK 111
             +    +DG+  N     +     +PS P+
Sbjct:    95 E----MDGKELNGRHIRVNPANDRPSAPR 119


>FB|FBgn0004838 [details] [associations]
            symbol:Hrb27C "Heterogeneous nuclear ribonucleoprotein at
            27C" species:7227 "Drosophila melanogaster" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS;NAS;IDA;IPI] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=NAS;TAS] [GO:0007319
            "negative regulation of oskar mRNA translation" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0007317
            "regulation of pole plasm oskar mRNA localization" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0045451 "pole
            plasm oskar mRNA localization" evidence=IMP] [GO:0048024
            "regulation of mRNA splicing, via spliceosome" evidence=IMP]
            [GO:0007298 "border follicle cell migration" evidence=IMP]
            [GO:0045727 "positive regulation of translation" evidence=IDA]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0007411 "axon guidance" evidence=IMP]
            [GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0007411 GO:GO:0043234 GO:GO:0005654
            EMBL:AE014134 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007298
            GO:GO:0048027 GO:GO:0003730 GO:GO:0003697 GO:GO:0030529
            GO:GO:0046331 GO:GO:0045727 GO:GO:0048024 GO:GO:0007319
            eggNOG:COG0724 GO:GO:0045451 KO:K14411 GeneTree:ENSGT00700000104255
            EMBL:X62639 EMBL:DQ062784 EMBL:AY069699 EMBL:AY128430 EMBL:S51720
            PIR:D41732 RefSeq:NP_001162897.1 RefSeq:NP_001162898.1
            RefSeq:NP_001245917.1 RefSeq:NP_001245918.1 RefSeq:NP_001245919.1
            RefSeq:NP_476869.1 RefSeq:NP_723228.1 RefSeq:NP_723229.1
            UniGene:Dm.1997 ProteinModelPortal:P48809 SMR:P48809 IntAct:P48809
            MINT:MINT-939547 STRING:P48809 PaxDb:P48809
            EnsemblMetazoa:FBtr0079346 EnsemblMetazoa:FBtr0079347
            EnsemblMetazoa:FBtr0079348 EnsemblMetazoa:FBtr0301403
            EnsemblMetazoa:FBtr0301404 EnsemblMetazoa:FBtr0307030
            EnsemblMetazoa:FBtr0307031 EnsemblMetazoa:FBtr0307032 GeneID:33968
            KEGG:dme:Dmel_CG10377 CTD:33968 FlyBase:FBgn0004838
            InParanoid:P48809 OMA:GGYDMYN OrthoDB:EOG4CJSZQ PhylomeDB:P48809
            ChiTaRS:Hrb27C GenomeRNAi:33968 NextBio:786189 Bgee:P48809
            GermOnline:CG10377 Uniprot:P48809
        Length = 421

 Score = 174 (66.3 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 32/76 (42%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+WET +E + +YF +FG+I++ VV+ +  +GRS+G+GFVTF +P        +
Sbjct:     8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67

Query:    84 AAPVIDGRRAN---CN 96
                 +DGR  +   CN
Sbjct:    68 GPHTLDGRTIDPKPCN 83

 Score = 105 (42.0 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 17/50 (34%), Positives = 33/50 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFRE 73
             KVF+GGL     +  +  +F ++G++ E V++ D+   +S+G+GF++F E
Sbjct:    97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEE 146


>UNIPROTKB|Q28IQ9 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
            binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
            [GO:0009409 "response to cold" evidence=ISS] [GO:0009790 "embryo
            development" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0022008 "neurogenesis" evidence=ISS] [GO:0045727 "positive
            regulation of translation" evidence=ISS] [GO:0048255 "mRNA
            stabilization" evidence=ISS] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0005840 "ribosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0016477
            GO:GO:0022008 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330
            GO:GO:0019899 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 eggNOG:COG0724 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 KO:K13195 CTD:1153 HOGENOM:HOG000276232 EMBL:CR760272
            RefSeq:NP_001017228.1 UniGene:Str.47654 ProteinModelPortal:Q28IQ9
            SMR:Q28IQ9 STRING:Q28IQ9 GeneID:549982 KEGG:xtr:549982
            Xenbase:XB-GENE-492781 Uniprot:Q28IQ9
        Length = 166

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 32/76 (42%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL +ET +E++E+ F ++G++ E VV+ D+ + RS+G+GFVTF  PE A  A + 
Sbjct:     7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q9DED4 [details] [associations]
            symbol:cirbp-b "Cold-inducible RNA-binding protein B"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007369
            "gastrulation" evidence=IMP] [GO:0009409 "response to cold"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0019899 "enzyme
            binding" evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=IGI;IMP] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0060212 "negative
            regulation of nuclear-transcribed mRNA poly(A) tail shortening"
            evidence=IMP] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480 GO:GO:0060212
            EMBL:AB044535 EMBL:BC054250 RefSeq:NP_001079794.1 UniGene:Xl.8151
            HSSP:P09651 ProteinModelPortal:Q9DED4 SMR:Q9DED4 MINT:MINT-274223
            PRIDE:Q9DED4 GeneID:379484 KEGG:xla:379484 CTD:379484
            Xenbase:XB-GENE-492785 KO:K13195 Uniprot:Q9DED4
        Length = 166

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 31/76 (40%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL ++T +E++E+ F ++G+I E VV+ D+ T RS+G+GFVTF  P+ A  A + 
Sbjct:     6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    66 MNGKAVDGRQIRVDQA 81


>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
            symbol:zgc:77052 "zgc:77052" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
            Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
            IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
            STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
            KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
        Length = 309

 Score = 168 (64.2 bits), Expect = 2.8e-12, P = 2.8e-12
 Identities = 27/69 (39%), Positives = 47/69 (68%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F+E ++  +    
Sbjct:    46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105

Query:    84 AAPVIDGRR 92
                 +DGR+
Sbjct:   106 KEHRLDGRQ 114

 Score = 122 (48.0 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 26/60 (43%), Positives = 39/60 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL  ET +E + +YF  FGEI    + TD  T + +G+ F+TF+E E A+K  ++
Sbjct:   130 KIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKE-EFAVKKILE 188


>WB|WBGene00003423 [details] [associations]
            symbol:msi-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
            GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:Z35601 EMBL:AB036738
            PIR:T24148 RefSeq:NP_497799.1 UniGene:Cel.19474
            ProteinModelPortal:G5EFS2 SMR:G5EFS2 EnsemblMetazoa:R10E9.1.1
            EnsemblMetazoa:R10E9.1.2 GeneID:175514 KEGG:cel:CELE_R10E9.1
            CTD:175514 WormBase:R10E9.1 OMA:VADKVCE NextBio:888480
            Uniprot:G5EFS2
        Length = 320

 Score = 168 (64.2 bits), Expect = 3.2e-12, P = 3.2e-12
 Identities = 29/75 (38%), Positives = 50/75 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T  E +  YF +FGE+ E +V+ D AT R++G+GF+TF +P +  K   +
Sbjct:    46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105

Query:    84 AAPVIDGRRANCNLA 98
                 +DG++ +  +A
Sbjct:   106 REHELDGKKIDPKVA 120

 Score = 162 (62.1 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 33/79 (41%), Positives = 49/79 (62%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   KVF+GGL+  +  E M++YFE +G++ +A+++ DKAT R +G+GFVTF   E A K
Sbjct:   131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+G+   C  A
Sbjct:   191 VCEIHFHEINGKMVECKKA 209


>UNIPROTKB|J3KTC1 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
        Length = 141

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 27/57 (47%), Positives = 42/57 (73%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             +K+F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GFVTF +P +  K
Sbjct:    17 SKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73


>FB|FBgn0011666 [details] [associations]
            symbol:msi "musashi" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IDA] [GO:0022416 "chaeta
            development" evidence=IMP] [GO:0003723 "RNA binding" evidence=ISM]
            [GO:0003729 "mRNA binding" evidence=ISS;NAS;TAS] [GO:0006397 "mRNA
            processing" evidence=ISS] [GO:0017148 "negative regulation of
            translation" evidence=IMP;TAS] [GO:0006417 "regulation of
            translation" evidence=TAS] [GO:0045182 "translation regulator
            activity" evidence=TAS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001709 "cell fate determination" evidence=TAS]
            [GO:0000900 "translation repressor activity, nucleic acid binding"
            evidence=TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
            [GO:0042078 "germ-line stem cell division" evidence=IMP]
            [GO:0071456 "cellular response to hypoxia" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014297 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071456 GO:GO:0022416
            GO:GO:0001709 GO:GO:0019827 GO:GO:0000900 GO:GO:0042078 KO:K14411
            GeneTree:ENSGT00700000104255 HSSP:Q61474 ChiTaRS:msi
            FlyBase:FBgn0011666 EMBL:BT133366 RefSeq:NP_001247303.1
            RefSeq:NP_733108.2 UniGene:Dm.1334 SMR:Q8IMS8 MINT:MINT-296706
            STRING:Q8IMS8 EnsemblMetazoa:FBtr0084881 EnsemblMetazoa:FBtr0305218
            EnsemblMetazoa:FBtr0333664 GeneID:43087 KEGG:dme:Dmel_CG5099
            UCSC:CG5099-RB CTD:43087 InParanoid:Q8IMS8 OMA:PIKAFAC
            GenomeRNAi:43087 NextBio:832139 Uniprot:Q8IMS8
        Length = 634

 Score = 162 (62.1 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
 Identities = 26/69 (37%), Positives = 45/69 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T  + +++YF  FG + + +++ D  T RS+G+GF+TF+EP    K    
Sbjct:   204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263

Query:    84 AAPVIDGRR 92
                 +DG++
Sbjct:   264 PIHTLDGKK 272

 Score = 148 (57.2 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 27/75 (36%), Positives = 43/75 (57%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG++ +T  E ++ YF QFG + E V++ D+ T R +G+GFVTF   +   + C  
Sbjct:   292 KIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEI 351

Query:    84 AAPVIDGRRANCNLA 98
                 I  ++  C  A
Sbjct:   352 HFHTIKNKKVECKKA 366

 Score = 33 (16.7 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
 Identities = 8/14 (57%), Positives = 8/14 (57%)

Query:   174 QLLSIPCMAMAMQQ 187
             QLL  P  A A QQ
Sbjct:   421 QLLQSPAAAAAAQQ 434


>TAIR|locus:2063177 [details] [associations]
            symbol:AT2G41060 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006952 "defense response" evidence=IMP]
            [GO:0008219 "cell death" evidence=IMP] [GO:0009693 "ethylene
            biosynthetic process" evidence=IMP] [GO:0010150 "leaf senescence"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009693
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0000166
            GO:GO:0008219 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0010150
            EMBL:AC004261 eggNOG:COG0724 KO:K12741 HSSP:P09012 OMA:CHKANDG
            EMBL:AF439844 EMBL:AY133583 EMBL:AK227158 IPI:IPI00545461
            PIR:T02113 RefSeq:NP_001078035.1 RefSeq:NP_181639.1
            UniGene:At.65764 ProteinModelPortal:O80678 SMR:O80678 IntAct:O80678
            STRING:O80678 PaxDb:O80678 PRIDE:O80678 EnsemblPlants:AT2G41060.1
            EnsemblPlants:AT2G41060.2 GeneID:818705 KEGG:ath:AT2G41060
            TAIR:At2g41060 HOGENOM:HOG000070822 InParanoid:O80678
            PhylomeDB:O80678 ProtClustDB:CLSN2683657 ArrayExpress:O80678
            Genevestigator:O80678 Uniprot:O80678
        Length = 451

 Score = 169 (64.5 bits), Expect = 6.0e-12, P = 6.0e-12
 Identities = 32/89 (35%), Positives = 49/89 (55%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D  + K+FV GL W+T+ +++   F+Q+GEI +   + DK +G+SKGYGF+ F+    A 
Sbjct:   124 DLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGAR 183

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKP 107
              A       I  R   C LA +G  +  P
Sbjct:   184 NALKQPQKKIGTRMTACQLASIGPVQGNP 212

 Score = 125 (49.1 bits), Expect = 3.5e-07, P = 3.5e-07
 Identities = 27/89 (30%), Positives = 47/89 (52%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K++V  ++ +   + + ++F +FGEI E  +  DKATGR KG+    +R  E+A KA  +
Sbjct:   228 KIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEE 287

Query:    84 AAPVIDGRRANCNLACLGVQRSKPSTPKH 112
                  +G   +C+ A  G ++ K     H
Sbjct:   288 PHKTFEGHVLHCHKANDGPKQVKQHQHNH 316


>UNIPROTKB|H0YA96 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
            ChiTaRS:HNRNPD Ensembl:ENST00000514671 Uniprot:H0YA96
        Length = 210

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:     2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:    62 KEHKLNGK 69

 Score = 117 (46.2 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:    87 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 142


>UNIPROTKB|D6RAF8 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
            HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
            IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
            Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
            Uniprot:D6RAF8
        Length = 221

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   158 KEHKLNGK 165


>UNIPROTKB|D6RBQ9 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
            ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
            ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
        Length = 155

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   139 KEHKLNGK 146


>UNIPROTKB|J3QKT5 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5
            Ensembl:ENST00000581776 Uniprot:J3QKT5
        Length = 99

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 27/56 (48%), Positives = 41/56 (73%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GFVTF +P +  K
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77


>ZFIN|ZDB-GENE-070424-97 [details] [associations]
            symbol:hnrnpd "heterogeneous nuclear
            ribonucleoprotein D" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070424-97 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
            OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:CR847788
            IPI:IPI00512852 Ensembl:ENSDART00000101414
            Ensembl:ENSDART00000123048 Uniprot:F1Q8A5
        Length = 314

 Score = 165 (63.1 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 28/68 (41%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    55 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEAESVEKVITQ 114

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   115 KEHKLNGK 122

 Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 20/56 (35%), Positives = 36/56 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF+ +GE+    +  +  T + +G+ F+TF+E E   K
Sbjct:   140 KIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEEEPVKK 195


>UNIPROTKB|Q5ZME1 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0043047 "single-stranded telomeric DNA binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0097157 GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF CTD:3181
            GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS EMBL:AC140791
            EMBL:AJ719443 IPI:IPI00651336 RefSeq:NP_001026156.1
            UniGene:Gga.22131 SMR:Q5ZME1 IntAct:Q5ZME1 STRING:Q5ZME1
            Ensembl:ENSGALT00000017975 GeneID:420627 KEGG:gga:420627
            InParanoid:Q5ZME1 NextBio:20823513 Uniprot:Q5ZME1
        Length = 349

 Score = 166 (63.5 bits), Expect = 7.0e-12, P = 7.0e-12
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    16 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 74

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    75 MAARPHTIDGRVVEPKRAVAREESGKP 101

 Score = 141 (54.7 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   106 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   166 VLQKYHTINGHNAEVRKA 183


>UNIPROTKB|F1NCW4 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            GeneTree:ENSGT00700000104347 OMA:PNQNWNQ EMBL:AADN02009040
            IPI:IPI00819680 Ensembl:ENSGALT00000038011 ArrayExpress:F1NCW4
            Uniprot:F1NCW4
        Length = 258

 Score = 161 (61.7 bits), Expect = 7.5e-12, P = 7.5e-12
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:     1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:    61 KEHKLNGK 68

 Score = 118 (46.6 bits), Expect = 6.8e-07, P = 6.8e-07
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:    86 KIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 141


>UNIPROTKB|H0Y8G5 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
            ChiTaRS:HNRNPD Ensembl:ENST00000509263 Bgee:H0Y8G5 Uniprot:H0Y8G5
        Length = 261

 Score = 161 (61.7 bits), Expect = 8.1e-12, P = 8.1e-12
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    31 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 90

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:    91 KEHKLNGK 98

 Score = 117 (46.2 bits), Expect = 9.0e-07, P = 9.0e-07
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   116 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 171


>UNIPROTKB|F1LM82 [details] [associations]
            symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
            GeneTree:ENSGT00700000104376 IPI:IPI00923129
            Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
        Length = 312

 Score = 164 (62.8 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    19 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 77

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    78 MAARPHSIDGRVVEPKRAVAREESGKP 104

 Score = 141 (54.7 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   109 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   169 VLQKYHTINGHNAEVRKA 186


>UNIPROTKB|F1PA19 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
            Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
        Length = 264

 Score = 161 (61.7 bits), Expect = 8.7e-12, P = 8.7e-12
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:    61 KEHRLDGR 68

 Score = 120 (47.3 bits), Expect = 4.3e-07, P = 4.3e-07
 Identities = 28/75 (37%), Positives = 42/75 (56%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D  + + +G+ F+TF+E E   K   
Sbjct:    85 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 143

Query:    83 DAAPVIDGRRANCNL 97
                  I G +  C L
Sbjct:   144 KKFHTISGSK-RCGL 157


>TAIR|locus:2103670 [details] [associations]
            symbol:UBA2A "UBP1-associated protein 2A" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0017091 "AU-rich element
            binding" evidence=IDA] [GO:0048255 "mRNA stabilization"
            evidence=NAS] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=TAS] [GO:0006952 "defense response" evidence=IMP]
            [GO:0008219 "cell death" evidence=IMP] [GO:0009693 "ethylene
            biosynthetic process" evidence=IMP] [GO:0010150 "leaf senescence"
            evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0005634 EMBL:CP002686
            GO:GO:0009693 GO:GO:0006952 GO:GO:0009738 GO:GO:0000166
            GO:GO:0008219 Gene3D:3.30.70.330 GO:GO:0010150 GO:GO:0017091
            GO:GO:0048255 EMBL:AL390921 HSSP:Q14103 KO:K12741
            ProtClustDB:CLSN2683657 EMBL:AF367280 EMBL:AY037245 EMBL:AY091040
            EMBL:AY117351 EMBL:AY133549 EMBL:BT006368 EMBL:AJ439404
            IPI:IPI00547983 PIR:T51274 RefSeq:NP_001190109.1
            RefSeq:NP_001190110.1 RefSeq:NP_567042.1 RefSeq:NP_850710.1
            RefSeq:NP_850711.1 UniGene:At.9845 SMR:Q9LES2 IntAct:Q9LES2
            STRING:Q9LES2 EnsemblPlants:AT3G56860.1 EnsemblPlants:AT3G56860.2
            EnsemblPlants:AT3G56860.3 EnsemblPlants:AT3G56860.4
            EnsemblPlants:AT3G56860.5 GeneID:824853 KEGG:ath:AT3G56860
            TAIR:At3g56860 InParanoid:Q9LES2 OMA:ADEDPVH Genevestigator:Q9LES2
            Uniprot:Q9LES2
        Length = 478

 Score = 168 (64.2 bits), Expect = 8.7e-12, P = 8.7e-12
 Identities = 32/83 (38%), Positives = 47/83 (56%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D  + K+FV GL W+T+ ET+ + F+Q+GEI +   + DK +G+SKGYGF+ ++    A 
Sbjct:   136 DPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGAR 195

Query:    79 KACVDAAPVIDGRRANCNLACLG 101
              A       I  R   C LA  G
Sbjct:   196 NALKQPQKKIGSRMTACQLASKG 218

 Score = 115 (45.5 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 26/92 (28%), Positives = 43/92 (46%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K++V  +  E   + +  +F +FGEI E  +  DK TGR KG+    ++  E+A +A
Sbjct:   243 TQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRA 302

Query:    81 CVDAAPVIDGRRANCNLACLGVQRSKPSTPKH 112
               +     +G   +C  A  G +  K     H
Sbjct:   303 LEEPHKTFEGHILHCQKAIDGPKPGKQQQHHH 334


>UNIPROTKB|Q7ZYE9 [details] [associations]
            symbol:hnrnpab "Hnrpab-prov protein" species:8355 "Xenopus
            laevis" [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOVERGEN:HBG002295 HSSP:Q14103 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 CTD:3182 EMBL:BC043814 RefSeq:NP_001080489.1
            UniGene:Xl.45404 ProteinModelPortal:Q7ZYE9 SMR:Q7ZYE9 IntAct:Q7ZYE9
            GeneID:380181 KEGG:xla:380181 Xenbase:XB-GENE-6043063
            Uniprot:Q7ZYE9
        Length = 324

 Score = 164 (62.8 bits), Expect = 9.3e-12, P = 9.3e-12
 Identities = 29/72 (40%), Positives = 46/72 (63%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+W+T K+ ++ YF +FGE+ +  +  D  TGRS+G+GF+ F++ E+  K
Sbjct:    61 TEGVKMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDK 120

Query:    80 ACVDAAPVIDGR 91
                     +DGR
Sbjct:   121 VLEHKEHRLDGR 132

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 26/76 (34%), Positives = 42/76 (55%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  ++ + +YFE FGEI EA+ +  D  T + +G+ F+TF+E +   K   
Sbjct:   149 KIFVGGLNPEAGEDQIREYFETFGEI-EAIELPMDPKTNKRRGFVFITFKEEDPVKKILE 207

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   208 KKFHNVSGSKCEIKIA 223


>MGI|MGI:1330294 [details] [associations]
            symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
            replication origin binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
            GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
            ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
            IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
            ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
            MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
            PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
            NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
            GermOnline:ENSMUSG00000020358 Uniprot:Q99020
        Length = 285

 Score = 162 (62.1 bits), Expect = 9.8e-12, P = 9.8e-12
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   136 KEHRLDGR 143

 Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF QFGEI EA+ +  D    + +G+ F+TF+E +   K   
Sbjct:   160 KIFVGGLNPEATEEKIREYFGQFGEI-EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   219 KKFHTVSGSKCEIKVA 234


>UNIPROTKB|Q9QX80 [details] [associations]
            symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
            EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
            PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
            RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
            STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
            GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
            Genevestigator:Q9QX80 Uniprot:Q9QX80
        Length = 285

 Score = 162 (62.1 bits), Expect = 9.8e-12, P = 9.8e-12
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   136 KEHRLDGR 143

 Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF QFGEI EA+ +  D    + +G+ F+TF+E +   K   
Sbjct:   160 KIFVGGLNPEATEEKIREYFGQFGEI-EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   219 KKFHTVSGSKCEIKVA 234


>UNIPROTKB|Q2HJ60 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0097157 "pre-mRNA
            intronic binding" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0043047 "single-stranded
            telomeric DNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0030529 GO:GO:0097157 GO:GO:0048025
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442
            OrthoDB:EOG4HQDKF EMBL:BC113298 IPI:IPI00695201
            RefSeq:NP_001039440.1 UniGene:Bt.48137 ProteinModelPortal:Q2HJ60
            SMR:Q2HJ60 STRING:Q2HJ60 PRIDE:Q2HJ60 Ensembl:ENSBTAT00000007527
            GeneID:507564 KEGG:bta:507564 CTD:3181 GeneTree:ENSGT00700000104376
            KO:K13158 OMA:HYSARTS NextBio:20868121 Uniprot:Q2HJ60
        Length = 341

 Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:     8 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 66

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    67 MAARPHSIDGRVVEPKRAVAREESGKP 93

 Score = 141 (54.7 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:    98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   158 VLQKYHTINGHNAEVRKA 175


>ZFIN|ZDB-GENE-040426-2717 [details] [associations]
            symbol:hnrpdl "heterogeneous nuclear
            ribonucleoprotein D-like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-2717
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
            CTD:9987 GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
            OrthoDB:EOG49W2FZ EMBL:CR847788 EMBL:BC055525 IPI:IPI00500216
            RefSeq:NP_998557.1 UniGene:Dr.75234 SMR:Q7SXN2 STRING:Q7SXN2
            Ensembl:ENSDART00000020631 GeneID:406701 KEGG:dre:406701
            InParanoid:Q7SXN2 NextBio:20818224 Uniprot:Q7SXN2
        Length = 296

 Score = 162 (62.1 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ +  Y  +FGE+L+  + TD  TGRS+G+GFV F++ E+  +    
Sbjct:    31 KMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKDAESVDRVLEL 90

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:    91 TEHKLDGK 98

 Score = 105 (42.0 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +  +E + +YF  +GEI    + TD  T   +G+ FVTF   E   K
Sbjct:   116 KVFVGGLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQK 171


>UNIPROTKB|D6R9P3 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
            SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
            Uniprot:D6R9P3
        Length = 280

 Score = 161 (61.7 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   131 KEHRLDGR 138

 Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D    + +G+ F+TF+E E   K   
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   214 KKFHTVSGSKCEIKVA 229


>RGD|69255 [details] [associations]
            symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
           species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
           mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
           evidence=IDA] [GO:0003688 "DNA replication origin binding"
           evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
           "cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
           evidence=ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
           transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
           evidence=ISO] [GO:0003700 "sequence-specific DNA binding
           transcription factor activity" evidence=ISO] [GO:0043565
           "sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
           InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
           RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
           GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
           Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
           UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
           ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
           STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
           Uniprot:Q9Z0U8
        Length = 298

 Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    89 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 148

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   149 KEHRLDGR 156

 Score = 117 (46.2 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF QFGEI EA+ +  D    + +G+ F+TF+E +   K   
Sbjct:   173 KIFVGGLNPEATEEKIREYFGQFGEI-EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 231

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   232 KKFHTVSGSKCEIKVA 247


>UNIPROTKB|F1LNF1 [details] [associations]
            symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310403
            GO:GO:0005730 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0071013 GO:GO:0050658 GO:GO:0043047
            GeneTree:ENSGT00700000104376 OMA:HYSARTS IPI:IPI00867934
            ProteinModelPortal:F1LNF1 Ensembl:ENSRNOT00000015152
            ArrayExpress:F1LNF1 Uniprot:F1LNF1
        Length = 352

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    19 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 77

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    78 MAARPHSIDGRVVEPKRAVAREESGKP 104

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   109 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   169 VLQKYHTINGHNAEVRKA 186


>UNIPROTKB|F1Q1K6 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 OMA:HYSARTS EMBL:AAEX03009384
            Ensembl:ENSCAFT00000004622 Uniprot:F1Q1K6
        Length = 353

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 78

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    79 MAARPHSIDGRVVEPKRAVAREESGKP 105

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   170 VLQKYHTINGHNAEVRKA 187


>UNIPROTKB|P22626 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0097157 "pre-mRNA intronic
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC;TAS] [GO:0006397 "mRNA processing" evidence=IDA]
            [GO:0050658 "RNA transport" evidence=IDA] [GO:0043047
            "single-stranded telomeric DNA binding" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
            GO:GO:0071013 GO:GO:0050658 eggNOG:COG0724 GO:GO:0043047
            HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
            HPA:HPA001666 CTD:3181 KO:K13158 OMA:HYSARTS EMBL:M29064
            EMBL:M29065 EMBL:U09123 EMBL:U09120 EMBL:U09121 EMBL:U09122
            EMBL:D28877 EMBL:AK289429 IPI:IPI00396378 IPI:IPI00414696
            PIR:A56845 RefSeq:NP_002128.1 RefSeq:NP_112533.1 UniGene:Hs.487774
            PDB:1X4B PDBsum:1X4B ProteinModelPortal:P22626 SMR:P22626
            IntAct:P22626 MINT:MINT-4998934 STRING:P22626 PhosphoSite:P22626
            DMDM:133257 REPRODUCTION-2DPAGE:IPI00396378
            REPRODUCTION-2DPAGE:IPI00414696 REPRODUCTION-2DPAGE:P22626
            SWISS-2DPAGE:P22626 UCD-2DPAGE:P22626 PaxDb:P22626 PRIDE:P22626
            Ensembl:ENST00000354667 Ensembl:ENST00000356674
            Ensembl:ENST00000360787 GeneID:3181 KEGG:hsa:3181 UCSC:uc003sxr.4
            UCSC:uc003sxs.4 GeneCards:GC07M026229 HGNC:HGNC:5033 HPA:CAB012403
            MIM:600124 neXtProt:NX_P22626 PharmGKB:PA162391140 PhylomeDB:P22626
            ChiTaRS:HNRNPA2B1 EvolutionaryTrace:P22626 GenomeRNAi:3181
            NextBio:12622 PMAP-CutDB:P22626 Bgee:P22626 CleanEx:HS_HNRNPA2B1
            Genevestigator:P22626 GermOnline:ENSG00000122566 Uniprot:P22626
        Length = 353

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 78

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    79 MAARPHSIDGRVVEPKRAVAREESGKP 105

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   170 VLQKYHTINGHNAEVRKA 187


>UNIPROTKB|Q5RBU8 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9601 "Pongo abelii" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0005654 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0030529
            HOVERGEN:HBG002295 CTD:3181 KO:K13158 EMBL:CR858535
            RefSeq:NP_001127331.1 UniGene:Pab.19213 HSSP:P22626
            ProteinModelPortal:Q5RBU8 SMR:Q5RBU8 PRIDE:Q5RBU8 GeneID:100174392
            KEGG:pon:100174392 InParanoid:Q5RBU8 Uniprot:Q5RBU8
        Length = 353

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 78

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    79 MAARPHSIDGRVVEPKRAVAREESGKP 105

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   170 VLQKHHTINGHNAEVRKA 187


>MGI|MGI:104819 [details] [associations]
            symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein
            A2/B1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=ISO] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
            [GO:0043047 "single-stranded telomeric DNA binding" evidence=ISO]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=IMP;IDA] [GO:0050658 "RNA transport" evidence=ISO]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
            [GO:0097157 "pre-mRNA intronic binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:104819 GO:GO:0005737 GO:GO:0005654
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0097157 GO:GO:0050658 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0043047 HOVERGEN:HBG002295 OrthoDB:EOG4HQDKF
            CTD:3181 GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS
            ChiTaRS:HNRNPA2B1 EMBL:AF406651 EMBL:AF452567 EMBL:AF073990
            EMBL:AF073993 EMBL:AK089012 EMBL:AK137214 EMBL:BC059107
            EMBL:BC141253 IPI:IPI00405058 IPI:IPI00622847 IPI:IPI00828488
            RefSeq:NP_058086.2 RefSeq:NP_872591.1 RefSeq:XP_001473875.2
            UniGene:Mm.155896 ProteinModelPortal:O88569 SMR:O88569
            IntAct:O88569 STRING:O88569 PhosphoSite:O88569
            REPRODUCTION-2DPAGE:IPI00405058 REPRODUCTION-2DPAGE:O88569
            SWISS-2DPAGE:O88569 PaxDb:O88569 PRIDE:O88569
            Ensembl:ENSMUST00000069949 Ensembl:ENSMUST00000090002
            Ensembl:ENSMUST00000114459 GeneID:100045191 GeneID:53379
            KEGG:mmu:100045191 KEGG:mmu:53379 UCSC:uc009bxm.1 UCSC:uc009bxn.1
            NextBio:458663 Bgee:O88569 CleanEx:MM_HNRNPA2B1
            Genevestigator:O88569 GermOnline:ENSMUSG00000004980 Uniprot:O88569
        Length = 353

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 78

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    79 MAARPHSIDGRVVEPKRAVAREESGKP 105

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   170 VLQKYHTINGHNAEVRKA 187


>RGD|1310403 [details] [associations]
            symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
            "single-stranded telomeric DNA binding" evidence=IEA;ISO]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
            [GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
            eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
            CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
            EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
            IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
            ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
            GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
            InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
            Genevestigator:A7VJC2 Uniprot:A7VJC2
        Length = 353

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 78

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    79 MAARPHSIDGRVVEPKRAVAREESGKP 105

 Score = 140 (54.3 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 27/78 (34%), Positives = 46/78 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:   110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   170 FLQKYHTINGHNAEVRKA 187


>UNIPROTKB|F1RX74 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0050658 "RNA transport" evidence=IEA] [GO:0048025 "negative
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005730 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0071013 GO:GO:0050658
            GO:GO:0043047 GeneTree:ENSGT00700000104376 OMA:HYSARTS
            EMBL:CU469303 Ensembl:ENSSSCT00000017244 Uniprot:F1RX74
        Length = 353

 Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 35/87 (40%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:    20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 78

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    79 MAARPHSIDGRVVEPKRAVAREESGKP 105

 Score = 135 (52.6 bits), Expect = 1.9e-08, P = 1.9e-08
 Identities = 25/78 (32%), Positives = 45/78 (57%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G++    +ITD+ +G+ +G+GF TF + +   K 
Sbjct:   110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKI 169

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   170 VLQKYHTINGHNAEVRKA 187


>UNIPROTKB|D6RD18 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
            SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
            Uniprot:D6RD18
        Length = 283

 Score = 161 (61.7 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   131 KEHRLDGR 138

 Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D    + +G+ F+TF+E E   K   
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   214 KKFHTVSGSKCEIKVA 229


>UNIPROTKB|Q3ZC44 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
            EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
            RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
            Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
            NextBio:20870841 Uniprot:Q3ZC44
        Length = 285

 Score = 161 (61.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   131 KEHRLDGR 138

 Score = 120 (47.3 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D  + + +G+ F+TF+E E   K   
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213

Query:    83 DAAPVIDGRRANCNLA 98
                  I G +    +A
Sbjct:   214 KKFHTISGSKCEIKVA 229


>UNIPROTKB|H0YA61 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 PROSITE:PS50102 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AL136305 HGNC:HGNC:21539 Ensembl:ENST00000509686
            Bgee:H0YA61 Uniprot:H0YA61
        Length = 80

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 30/50 (60%), Positives = 38/50 (76%)

Query:    54 VITDKATGRSKGYGFVTFREPEAAMKACVDAAPVIDGRRANCNLACLGVQ 103
             VITD+ TG+S+GYGFVT  +  AA +AC D  P+IDGR+AN NLA LG +
Sbjct:     1 VITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAK 50


>UNIPROTKB|H0YHB7 [details] [associations]
            symbol:MSI1 "RNA-binding protein Musashi homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC003982 HGNC:HGNC:7330 Ensembl:ENST00000546985 Uniprot:H0YHB7
        Length = 233

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:    38 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 97

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:    98 VCEIHFHEINNKMVECKKA 116


>UNIPROTKB|B4DM51 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 EMBL:AK297295 IPI:IPI00908857
            SMR:B4DM51 STRING:B4DM51 Ensembl:ENST00000442934 Uniprot:B4DM51
        Length = 267

 Score = 159 (61.0 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:    46 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 105

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   106 VCEIHFHEINNKMVECKKA 124


>UNIPROTKB|B4DTC3 [details] [associations]
            symbol:HNRNPD "cDNA FLJ54150, highly similar to
            Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
            UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
            Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
            Ensembl:ENST00000543098 Uniprot:B4DTC3
        Length = 303

 Score = 161 (61.7 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   106 KEHKLNGK 113

 Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   131 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 186


>UNIPROTKB|E9PTS0 [details] [associations]
            symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
            Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
        Length = 331

 Score = 162 (62.1 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   135 KEHRLDGR 142

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF QFGEI EA+ +  D    + +G+ F+TF+E +   K   
Sbjct:   159 KIFVGGLNPEATEEKIREYFGQFGEI-EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 217

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   218 KKFHTVSGSKCEIKVA 233


>UNIPROTKB|A5D9H5 [details] [associations]
            symbol:HNRPD "Heterogeneous nuclear ribonucleoprotein D"
            species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 InterPro:IPR012956
            Pfam:PF08143 EMBL:DAAA02018245 EMBL:BT030594 IPI:IPI00905408
            RefSeq:NP_001091533.1 UniGene:Bt.52882 SMR:A5D9H5 STRING:A5D9H5
            Ensembl:ENSBTAT00000056365 GeneID:527471 KEGG:bta:527471
            NextBio:20874604 Uniprot:A5D9H5
        Length = 306

 Score = 161 (61.7 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   158 KEHKLNGK 165

 Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238


>UNIPROTKB|Q9QX81 [details] [associations]
            symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
            EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
            PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
            GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
            RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
            Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
            Uniprot:Q9QX81
        Length = 332

 Score = 162 (62.1 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   136 KEHRLDGR 143

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF QFGEI EA+ +  D    + +G+ F+TF+E +   K   
Sbjct:   160 KIFVGGLNPEATEEKIREYFGQFGEI-EAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   219 KKFHTVSGSKCEIKVA 234


>RGD|1309950 [details] [associations]
            symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein D-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309950 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
            EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
            UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
            PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
            NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
        Length = 322

 Score = 161 (61.7 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 27/72 (37%), Positives = 47/72 (65%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T+  K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K
Sbjct:    48 TSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 107

Query:    80 ACVDAAPVIDGR 91
                     +DG+
Sbjct:   108 VLELKEHKLDGK 119

 Score = 110 (43.8 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 192


>UNIPROTKB|Q3SWU3 [details] [associations]
            symbol:Hnrpdl "Heterogeneous nuclear ribonucleoprotein
            D-like" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1309950
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
            EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
            UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
            PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
            NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
        Length = 322

 Score = 161 (61.7 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 27/72 (37%), Positives = 47/72 (65%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T+  K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K
Sbjct:    48 TSGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDK 107

Query:    80 ACVDAAPVIDGR 91
                     +DG+
Sbjct:   108 VLELKEHKLDGK 119

 Score = 110 (43.8 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 192


>UNIPROTKB|D6RBZ0 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
            SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
            Uniprot:D6RBZ0
        Length = 327

 Score = 161 (61.7 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   131 KEHRLDGR 138

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D    + +G+ F+TF+E E   K   
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213

Query:    83 DAAPVIDGRRANCNLA 98
                  + G +    +A
Sbjct:   214 KKFHTVSGSKCEIKVA 229


>UNIPROTKB|Q96DH6 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0048864 "stem cell
            development" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG48GW3J EMBL:BC001526
            EMBL:BC017560 EMBL:AK093888 IPI:IPI00073713 IPI:IPI00167806
            IPI:IPI00455161 RefSeq:NP_620412.1 RefSeq:NP_733839.1
            UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6
            IntAct:Q96DH6 STRING:Q96DH6 PhosphoSite:Q96DH6 DMDM:51316513
            PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073
            Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540
            KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540
            GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897
            neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM
            PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316
            ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2
            Genevestigator:Q96DH6 GermOnline:ENSG00000153944 Uniprot:Q96DH6
        Length = 328

 Score = 161 (61.7 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 27/56 (48%), Positives = 41/56 (73%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GFVTF +P +  K
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77

 Score = 159 (61.0 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   167 VCEIHFHEINNKMVECKKA 185


>UNIPROTKB|E2R771 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:AAEX03026334 RefSeq:XP_863171.1 ProteinModelPortal:E2R771
            Ensembl:ENSCAFT00000024556 GeneID:609457 KEGG:cfa:609457
            Uniprot:E2R771
        Length = 162

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 31/70 (44%), Positives = 45/70 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC-V 82
             K+FVGGL + T ++ +E +F  FG I E VV+ D+ T RS+G+GF+TF +PE A  A   
Sbjct:     7 KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRA 66

Query:    83 DAAPVIDGRR 92
                  +DGR+
Sbjct:    67 MNGESLDGRQ 76


>UNIPROTKB|D6RF44 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
            HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
            ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
            ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
        Length = 112

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 26/67 (38%), Positives = 45/67 (67%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             +F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K     
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:    85 APVIDGR 91
                ++G+
Sbjct:    61 EHKLNGK 67


>UNIPROTKB|Q99729 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
            evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
            EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
            EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
            EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
            IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
            PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
            UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
            SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
            PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
            PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
            Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
            KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
            GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
            neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
            OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
            EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
            ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
            Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
        Length = 332

 Score = 161 (61.7 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 27/68 (39%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K    
Sbjct:    70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   130 KEHRLDGR 137

 Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query:    24 KVFVGGLAWETQ-KETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKAC 81
             K+FVGGL  E+  +E + +YF +FGEI EA+ +  D    + +G+ F+TF+E E   K  
Sbjct:   154 KIFVGGLNPESPTEEKIREYFGEFGEI-EAIELPMDPKLNKRRGFVFITFKEEEPVKKVL 212

Query:    82 VDAAPVIDGRRANCNLA 98
                   + G +    +A
Sbjct:   213 EKKFHTVSGSKCEIKVA 229


>UNIPROTKB|D4A1X0 [details] [associations]
            symbol:D4A1X0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0097157
            GO:GO:0048025 OrthoDB:EOG4HQDKF IPI:IPI00778370
            ProteinModelPortal:D4A1X0 Ensembl:ENSRNOT00000061082 Uniprot:D4A1X0
        Length = 312

 Score = 160 (61.4 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 34/87 (39%), Positives = 54/87 (62%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL++ET +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A +   
Sbjct:     8 FCKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDVA 66

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    67 MAARPHSIDGRVVEPKRAVAREESGKP 93

 Score = 125 (49.1 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 26/78 (33%), Positives = 45/78 (57%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:    98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGK-RGFGFVTFDDHDPVDKI 156

Query:    81 CVDAAPVIDGRRANCNLA 98
              +      +G  A    A
Sbjct:   157 VLQKYHTKNGHNAEVRKA 174


>UNIPROTKB|Q9TTV2 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
            GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
            ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
        Length = 341

 Score = 161 (61.7 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 34/87 (39%), Positives = 55/87 (63%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL+++T +E++  Y+EQ+G++ + VV+ D A+ RS+G+GFVTF    A + A 
Sbjct:     8 FRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM-AEVDAA 66

Query:    82 VDAAP-VIDGRRANCNLACLGVQRSKP 107
             + A P  IDGR      A    +  KP
Sbjct:    67 MAARPHSIDGRVVEPKRAVAREESGKP 93

 Score = 135 (52.6 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 26/78 (33%), Positives = 45/78 (57%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YF ++G+I    +ITD+ +G+ +G+GFVTF + +   K 
Sbjct:    98 TVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   158 VLQKYHTINGHNAEVRKA 175


>UNIPROTKB|F1MS42 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
            "polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
            EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
            Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
        Length = 342

 Score = 161 (61.7 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    
Sbjct:     1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60

Query:    84 AAPVIDGRRANCNLA 98
             +   +D +  +  +A
Sbjct:    61 SRHELDSKTIDPKVA 75

 Score = 158 (60.7 bits), Expect = 5.1e-11, P = 5.1e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:    86 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 145

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   146 VCEIHFHEINNKMVECKKA 164


>MGI|MGI:1923876 [details] [associations]
            symbol:Msi2 "musashi RNA-binding protein 2" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844
            "polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
            evidence=IDA] [GO:0048864 "stem cell development" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2
            EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637
            EMBL:AK049688 EMBL:AK051269 IPI:IPI00120924 IPI:IPI00462899
            IPI:IPI00462900 RefSeq:NP_473384.1 UniGene:Mm.400451
            UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6
            SMR:Q920Q6 STRING:Q920Q6 PhosphoSite:Q920Q6 PaxDb:Q920Q6
            PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909
            GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvn.2 InParanoid:Q920Q6
            OMA:ENYISAA NextBio:345476 Bgee:Q920Q6 CleanEx:MM_MSI2
            Genevestigator:Q920Q6 GermOnline:ENSMUSG00000069769 Uniprot:Q920Q6
        Length = 346

 Score = 161 (61.7 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 27/56 (48%), Positives = 41/56 (73%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GFVTF +P +  K
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77

 Score = 159 (61.0 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   167 VCEIHFHEINNKMVECKKA 185


>UNIPROTKB|A6H6Y0 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0042162 "telomeric DNA binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0030529 GO:GO:0043488 GO:GO:0042162 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 OrthoDB:EOG49W2FZ
            OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:DAAA02018245
            UniGene:Bt.52882 EMBL:BC146038 IPI:IPI00696935 SMR:A6H6Y0
            STRING:A6H6Y0 Ensembl:ENSBTAT00000018540 InParanoid:A6H6Y0
            Uniprot:A6H6Y0
        Length = 355

 Score = 161 (61.7 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   158 KEHKLNGK 165

 Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238


>UNIPROTKB|E2RIX2 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 OMA:PNQNWNQ
            InterPro:IPR012956 Pfam:PF08143 EMBL:AAEX03016719
            RefSeq:XP_857957.1 Ensembl:ENSCAFT00000038801 GeneID:478450
            KEGG:cfa:478450 Uniprot:E2RIX2
        Length = 355

 Score = 161 (61.7 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   158 KEHKLNGK 165

 Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238


>UNIPROTKB|Q14103 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0042162 "telomeric DNA binding" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0006396
            "RNA processing" evidence=TAS] [GO:0006401 "RNA catabolic process"
            evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
            Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AF026126
            GO:GO:0005829 GO:GO:0045893 GO:GO:0005654 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006401 GO:GO:0048255 GO:GO:0030529 EMBL:CH471057
            GO:GO:0000398 GO:GO:0042162 eggNOG:COG0724 HOVERGEN:HBG002295
            KO:K13044 EMBL:AC124016 OrthoDB:EOG49W2FZ EMBL:D55671 EMBL:D55672
            EMBL:D55673 EMBL:D55674 EMBL:AK292707 EMBL:BC002401 EMBL:BC023977
            EMBL:BC026015 EMBL:X03910 EMBL:AF039575 EMBL:M94630 IPI:IPI00028888
            IPI:IPI00220683 IPI:IPI00220684 IPI:IPI00220685 PIR:A24016
            PIR:A44192 PIR:B48138 RefSeq:NP_001003810.1 RefSeq:NP_002129.2
            RefSeq:NP_112737.1 RefSeq:NP_112738.1 UniGene:Hs.480073 PDB:1HD0
            PDB:1HD1 PDB:1IQT PDB:1WTB PDB:1X0F PDB:2Z5N PDBsum:1HD0
            PDBsum:1HD1 PDBsum:1IQT PDBsum:1WTB PDBsum:1X0F PDBsum:2Z5N
            ProteinModelPortal:Q14103 SMR:Q14103 IntAct:Q14103
            MINT:MINT-5001251 STRING:Q14103 PhosphoSite:Q14103 DMDM:13124489
            SWISS-2DPAGE:Q14103 PaxDb:Q14103 PRIDE:Q14103 DNASU:3184
            Ensembl:ENST00000313899 Ensembl:ENST00000352301
            Ensembl:ENST00000353341 GeneID:3184 KEGG:hsa:3184 UCSC:uc003hmm.1
            UCSC:uc003hmn.1 UCSC:uc003hmo.1 UCSC:uc003hmp.1 CTD:3184
            GeneCards:GC04M083274 HGNC:HGNC:5036 HPA:HPA004911 MIM:601324
            neXtProt:NX_Q14103 PharmGKB:PA29361 InParanoid:Q14103 OMA:PNQNWNQ
            PhylomeDB:Q14103 ChiTaRS:HNRNPD EvolutionaryTrace:Q14103
            GenomeRNAi:3184 NextBio:12644 PMAP-CutDB:Q14103 ArrayExpress:Q14103
            Bgee:Q14103 Genevestigator:Q14103 GermOnline:ENSG00000138668
            InterPro:IPR012956 Pfam:PF08143 Uniprot:Q14103
        Length = 355

 Score = 161 (61.7 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   158 KEHKLNGK 165

 Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238


>MGI|MGI:101947 [details] [associations]
            symbol:Hnrnpd "heterogeneous nuclear ribonucleoprotein D"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042162
            "telomeric DNA binding" evidence=ISO] [GO:0043488 "regulation of
            mRNA stability" evidence=IMP] [GO:0048255 "mRNA stabilization"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:101947 GO:GO:0005829
            GO:GO:0005634 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0006351 GO:GO:0003723 GO:GO:0048255 GO:GO:0030529
            GO:GO:0043488 GO:GO:0042162 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
            OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 EMBL:U11273 EMBL:U11274
            EMBL:BC011172 EMBL:BC049098 IPI:IPI00230086 IPI:IPI00330958
            IPI:IPI00336873 IPI:IPI00336874 PIR:I49069 PIR:I49070
            RefSeq:NP_001070733.1 RefSeq:NP_001070734.1 RefSeq:NP_001070735.1
            RefSeq:NP_031542.2 UniGene:Mm.150231 ProteinModelPortal:Q60668
            SMR:Q60668 DIP:DIP-31411N IntAct:Q60668 STRING:Q60668
            PhosphoSite:Q60668 PaxDb:Q60668 PRIDE:Q60668
            Ensembl:ENSMUST00000019128 Ensembl:ENSMUST00000172361 GeneID:11991
            KEGG:mmu:11991 UCSC:uc008ygt.1 UCSC:uc008ygu.1 InParanoid:Q60668
            NextBio:280159 Bgee:Q60668 Genevestigator:Q60668
            GermOnline:ENSMUSG00000000568 Uniprot:Q60668
        Length = 355

 Score = 161 (61.7 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 27/68 (39%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   158 KEHKLNGK 165

 Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238


>UNIPROTKB|Q5ZI72 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
            GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 EMBL:AJ720912 IPI:IPI00591109
            RefSeq:NP_001026313.1 UniGene:Gga.4605 HSSP:Q14103
            ProteinModelPortal:Q5ZI72 SMR:Q5ZI72 PRIDE:Q5ZI72
            Ensembl:ENSGALT00000018235 GeneID:422601 KEGG:gga:422601 CTD:9987
            GeneTree:ENSGT00700000104347 KO:K13044 NextBio:20825211
            Uniprot:Q5ZI72
        Length = 301

 Score = 159 (61.0 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K    
Sbjct:    31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 90

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:    91 KEHKLDGK 98

 Score = 110 (43.8 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   116 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 171


>UNIPROTKB|O43347 [details] [associations]
            symbol:MSI1 "RNA-binding protein Musashi homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
            hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
            EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
            UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
            IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
            PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
            GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
            GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
            neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
            OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
            Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
            GermOnline:ENSG00000135097 Uniprot:O43347
        Length = 362

 Score = 161 (61.7 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query:    84 AAPVIDGRRANCNLA 98
             +   +D +  +  +A
Sbjct:    81 SRHELDSKTIDPKVA 95

 Score = 158 (60.7 bits), Expect = 5.9e-11, P = 5.9e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   166 VCEIHFHEINNKMVECKKA 184


>MGI|MGI:107376 [details] [associations]
            symbol:Msi1 "musashi RNA-binding protein 1" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
            "response to hormone stimulus" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
            GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
            EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
            RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
            PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
            ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
            PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
            Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
            UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
            EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
            Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
        Length = 362

 Score = 161 (61.7 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query:    84 AAPVIDGRRANCNLA 98
             +   +D +  +  +A
Sbjct:    81 SRHELDSKTIDPKVA 95

 Score = 156 (60.0 bits), Expect = 9.8e-11, P = 9.8e-11
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E ++ YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   166 VCEIHFHEINNKMVECKKA 184


>RGD|628778 [details] [associations]
            symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
            evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
            evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
            evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
            evidence=IMP] [GO:0030855 "epithelial cell differentiation"
            evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
            RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
            SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
            KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
            Genevestigator:Q8K3P4 Uniprot:Q8K3P4
        Length = 362

 Score = 161 (61.7 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query:    84 AAPVIDGRRANCNLA 98
             +   +D +  +  +A
Sbjct:    81 SRHELDSKTIDPKVA 95

 Score = 156 (60.0 bits), Expect = 9.8e-11, P = 9.8e-11
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E ++ YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   166 VCEIHFHEINNKMVECKKA 184


>UNIPROTKB|Q8K3P4 [details] [associations]
            symbol:Msi1 "RNA-binding protein Musashi homolog 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
            RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
            SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
            KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
            Genevestigator:Q8K3P4 Uniprot:Q8K3P4
        Length = 362

 Score = 161 (61.7 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query:    84 AAPVIDGRRANCNLA 98
             +   +D +  +  +A
Sbjct:    81 SRHELDSKTIDPKVA 95

 Score = 156 (60.0 bits), Expect = 9.8e-11, P = 9.8e-11
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E ++ YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   166 VCEIHFHEINNKMVECKKA 184


>UNIPROTKB|E2RK48 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
            GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
            RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
            KEGG:cfa:611488 Uniprot:E2RK48
        Length = 362

 Score = 161 (61.7 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/75 (38%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query:    84 AAPVIDGRRANCNLA 98
             +   +D +  +  +A
Sbjct:    81 SRHELDSKTIDPKVA 95

 Score = 150 (57.9 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 30/79 (37%), Positives = 46/79 (58%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQF ++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 165

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   166 VCEIHFHEINNKMVECKKA 184


>UNIPROTKB|I3L5X7 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:FP325173 RefSeq:NP_001230348.1 UniGene:Ssc.3311
            Ensembl:ENSSSCT00000030983 GeneID:100627807 KEGG:ssc:100627807
            Uniprot:I3L5X7
        Length = 156

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC-V 82
             K+FVGGL + T ++ +E +F  FG I E VV+ D+ T RS+G+GF+TF  PE A  A   
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66

Query:    83 DAAPVIDGRR 92
                  +DGR+
Sbjct:    67 MNGESLDGRQ 76


>UNIPROTKB|Q83CD7 [details] [associations]
            symbol:CBU_1183 "Glycine-rich RNA-binding protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K++VG L+++   + ++ +F Q+GEI EA +I D+ TGRSKG+ F+T+   +AA +A   
Sbjct:    19 KIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSK 78

Query:    84 AAPV-IDGRRANCNLA 98
             A  + + GR+   N+A
Sbjct:    79 ANGIDLQGRKIRVNIA 94


>UNIPROTKB|Q9PTX2 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8400 "Rana catesbeiana" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS] [GO:0009409
            "response to cold" evidence=ISS] [GO:0009790 "embryo development"
            evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
            [GO:0019899 "enzyme binding" evidence=ISS] [GO:0022008
            "neurogenesis" evidence=ISS] [GO:0042750 "hibernation"
            evidence=IEP] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=ISS] [GO:0060212
            "negative regulation of nuclear-transcribed mRNA poly(A) tail
            shortening" evidence=ISS] [GO:0005840 "ribosome" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0019899 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 HSSP:P09651 EMBL:AB025351 ProteinModelPortal:Q9PTX2
            SMR:Q9PTX2 GO:GO:0042750 Uniprot:Q9PTX2
        Length = 164

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 31/76 (40%), Positives = 48/76 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++ +E  F ++G+I E VV+ D+ T RS+G+GFVTF   E A  A   
Sbjct:     7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKTVDGRQIRVDQA 82


>TIGR_CMR|CBU_1183 [details] [associations]
            symbol:CBU_1183 "nucleic acid binding domain protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K++VG L+++   + ++ +F Q+GEI EA +I D+ TGRSKG+ F+T+   +AA +A   
Sbjct:    19 KIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSK 78

Query:    84 AAPV-IDGRRANCNLA 98
             A  + + GR+   N+A
Sbjct:    79 ANGIDLQGRKIRVNIA 94


>TAIR|locus:2050992 [details] [associations]
            symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
            ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
            IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
            ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
            PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
            KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
            PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
            Uniprot:O22791
        Length = 404

 Score = 162 (62.1 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 28/68 (41%), Positives = 44/68 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GG++W+T +  + +YF  FGE+L+  V+ +KATGR +G+GFV F +P    +   D
Sbjct:     7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66

Query:    84 AAPVIDGR 91
                 ID R
Sbjct:    67 KHH-IDNR 73

 Score = 113 (44.8 bits), Expect = 5.9e-06, P = 5.9e-06
 Identities = 20/48 (41%), Positives = 31/48 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTF 71
             K+FVGGL      +    YFE +G + +AV++ D+ T R +G+GFV+F
Sbjct:   111 KIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSF 158


>UNIPROTKB|Q5ZIH1 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            UniGene:Gga.4605 GeneTree:ENSGT00700000104347 KO:K13044
            OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ EMBL:AADN02009040
            EMBL:AJ720813 IPI:IPI00597667 RefSeq:NP_001026314.1 SMR:Q5ZIH1
            STRING:Q5ZIH1 Ensembl:ENSGALT00000018234 GeneID:422602
            KEGG:gga:422602 InParanoid:Q5ZIH1 NextBio:20825212 Uniprot:Q5ZIH1
        Length = 257

 Score = 156 (60.0 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 26/67 (38%), Positives = 45/67 (67%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             +F+GGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GFV F+E E+  K     
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:    85 APVIDGR 91
                ++G+
Sbjct:    61 EHKLNGK 67

 Score = 118 (46.6 bits), Expect = 6.7e-07, P = 6.7e-07
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:    85 KIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140


>UNIPROTKB|B4DHE8 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 UniGene:Hs.658922
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 EMBL:AK295060 IPI:IPI00910884
            SMR:B4DHE8 STRING:B4DHE8 Ensembl:ENST00000416426 UCSC:uc010wnm.1
            Uniprot:B4DHE8
        Length = 324

 Score = 159 (61.0 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:    85 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 144

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   145 VCEIHFHEINNKMVECKKA 163

 Score = 156 (60.0 bits), Expect = 7.3e-11, P = 7.3e-11
 Identities = 26/55 (47%), Positives = 40/55 (72%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             +F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GFVTF +P +  K
Sbjct:     1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 55


>MGI|MGI:1355299 [details] [associations]
            symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein
            D-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISA] [GO:0003690
            "double-stranded DNA binding" evidence=ISO] [GO:0003697
            "single-stranded DNA binding" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008143 "poly(A)
            RNA binding" evidence=ISO] [GO:0010468 "regulation of gene
            expression" evidence=ISO] [GO:0016071 "mRNA metabolic process"
            evidence=ISA] [GO:0034046 "poly(G) RNA binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1355299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0016071 GO:GO:0006355 GO:GO:0000166 GO:GO:0003677
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 ChiTaRS:HNRPDL
            EMBL:AB017020 EMBL:AK011581 EMBL:AK172629 EMBL:BC021374
            IPI:IPI00129417 UniGene:Mm.389579 ProteinModelPortal:Q9Z130
            SMR:Q9Z130 IntAct:Q9Z130 STRING:Q9Z130 PhosphoSite:Q9Z130
            PaxDb:Q9Z130 PRIDE:Q9Z130 InParanoid:Q9Z130 Bgee:Q9Z130
            CleanEx:MM_HNRPDL Genevestigator:Q9Z130 Uniprot:Q9Z130
        Length = 301

 Score = 158 (60.7 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K    
Sbjct:    30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:    90 KEHKLDGK 97

 Score = 110 (43.8 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   115 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 170


>UNIPROTKB|Q3SZN4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 eggNOG:COG0724 GO:GO:0070181 KO:K13195 CTD:1153
            HOGENOM:HOG000276232 OMA:ENRSRGY OrthoDB:EOG4HHP40
            GeneTree:ENSGT00700000104309 EMBL:DAAA02020258 EMBL:BC102773
            IPI:IPI00702406 RefSeq:NP_001029450.1 UniGene:Bt.23273 SMR:Q3SZN4
            Ensembl:ENSBTAT00000004477 GeneID:507120 KEGG:bta:507120
            InParanoid:Q3SZN4 NextBio:20867909 Uniprot:Q3SZN4
        Length = 213

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|E2R6G2 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:E2R6G2 Ensembl:ENSCAFT00000031013 Uniprot:E2R6G2
        Length = 172

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|F6XHA7 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13195 CTD:1153
            OMA:ENRSRGY GeneTree:ENSGT00700000104309 Ensembl:ENSCAFT00000031013
            EMBL:AAEX03012655 RefSeq:XP_868600.1 GeneID:476755 KEGG:cfa:476755
            Uniprot:F6XHA7
        Length = 185

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EJV5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
        Length = 105

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EMY9 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000586548 Uniprot:K7EMY9
        Length = 159

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EPM4 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585913 Ensembl:ENST00000586636
            Ensembl:ENST00000586773 Ensembl:ENST00000589235
            Ensembl:ENST00000589686 Ensembl:ENST00000591935 Uniprot:K7EPM4
        Length = 168

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7EQR7 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585914 Uniprot:K7EQR7
        Length = 202

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|K7ER40 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000591659 Uniprot:K7ER40
        Length = 174

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|P98179 [details] [associations]
            symbol:RBM3 "Putative RNA-binding protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0030425
            "dendrite" evidence=ISS] [GO:0006417 "regulation of translation"
            evidence=ISS] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=ISS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
            GO:GO:0045727 eggNOG:COG0724 GO:GO:0015934 HOVERGEN:HBG107480
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GO:GO:0035196 EMBL:AF196969
            GO:GO:0043023 EMBL:U28686 EMBL:BC006825 IPI:IPI00024320 PIR:G01859
            RefSeq:NP_006734.1 UniGene:Hs.301404 ProteinModelPortal:P98179
            SMR:P98179 IntAct:P98179 MINT:MINT-5002714 STRING:P98179
            PhosphoSite:P98179 DMDM:1710620 PaxDb:P98179 PeptideAtlas:P98179
            PRIDE:P98179 DNASU:5935 Ensembl:ENST00000376755
            Ensembl:ENST00000376759 GeneID:5935 KEGG:hsa:5935 UCSC:uc004dkf.2
            CTD:5935 GeneCards:GC0XP048432 HGNC:HGNC:9900 HPA:HPA003624
            MIM:300027 neXtProt:NX_P98179 PharmGKB:PA34265 InParanoid:P98179
            KO:K13186 OMA:SDAMRAM PhylomeDB:P98179 ChiTaRS:RBM3 GenomeRNAi:5935
            NextBio:23136 ArrayExpress:P98179 Bgee:P98179 CleanEx:HS_RBM3
            Genevestigator:P98179 GermOnline:ENSG00000102317 Uniprot:P98179
        Length = 157

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/72 (44%), Positives = 47/72 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPE---AAMKA 80
             K+FVGGL + T ++ +E +F  FG I E VV+ D+ T RS+G+GF+TF  PE    AM+A
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66

Query:    81 CVDAAPVIDGRR 92
                 +  +DGR+
Sbjct:    67 MNGES--LDGRQ 76


>UNIPROTKB|Q14011 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISS;IDA] [GO:0048255 "mRNA stabilization"
            evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
            [GO:0030371 "translation repressor activity" evidence=ISS]
            [GO:0034063 "stress granule assembly" evidence=ISS] [GO:0009411
            "response to UV" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
            3'-UTR binding" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=IDA] [GO:0009409 "response to cold"
            evidence=TAS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:D78134 EMBL:AF021336
            EMBL:AC004258 EMBL:BC000403 EMBL:BC000901 IPI:IPI00641579
            RefSeq:NP_001271.1 UniGene:Hs.618145 UniGene:Hs.634522 PDB:1X5S
            PDBsum:1X5S ProteinModelPortal:Q14011 SMR:Q14011 IntAct:Q14011
            MINT:MINT-5004534 STRING:Q14011 PhosphoSite:Q14011 DMDM:5921786
            REPRODUCTION-2DPAGE:IPI00180954 PaxDb:Q14011 PRIDE:Q14011
            DNASU:1153 Ensembl:ENST00000320936 GeneID:1153 KEGG:hsa:1153
            UCSC:uc002lrr.4 GeneCards:GC19P001269 HGNC:HGNC:1982 MIM:602649
            neXtProt:NX_Q14011 PharmGKB:PA26519 HOGENOM:HOG000276232
            InParanoid:Q14011 OMA:ENRSRGY OrthoDB:EOG4HHP40 PhylomeDB:Q14011
            ChiTaRS:CIRBP EvolutionaryTrace:Q14011 GenomeRNAi:1153 NextBio:4788
            ArrayExpress:Q14011 Bgee:Q14011 CleanEx:HS_CIRBP
            Genevestigator:Q14011 GermOnline:ENSG00000099622 Uniprot:Q14011
        Length = 172

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|F1S6R1 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 GO:GO:0070181 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:CU929580
            Ensembl:ENSSSCT00000014671 Uniprot:F1S6R1
        Length = 172

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|Q5RF83 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:CR857278
            RefSeq:NP_001124692.1 UniGene:Pab.19491 ProteinModelPortal:Q5RF83
            SMR:Q5RF83 PRIDE:Q5RF83 GeneID:100171539 KEGG:pon:100171539
            Uniprot:Q5RF83
        Length = 172

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>MGI|MGI:1099460 [details] [associations]
            symbol:Rbm3 "RNA binding motif protein 3" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412 "translation"
            evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0009409
            "response to cold" evidence=IDA] [GO:0015934 "large ribosomal
            subunit" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
            [GO:0043023 "ribosomal large subunit binding" evidence=IPI]
            [GO:0045727 "positive regulation of translation" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1099460 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006412 GO:GO:0030425 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724
            HOVERGEN:HBG107480 HOGENOM:HOG000276232 OrthoDB:EOG4HHP40
            GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186 EMBL:AB016424
            EMBL:AY052560 EMBL:BC006580 IPI:IPI00130883 RefSeq:NP_001159882.1
            RefSeq:NP_001159883.1 UniGene:Mm.128512 UniGene:Mm.360569
            ProteinModelPortal:O89086 SMR:O89086 IntAct:O89086 STRING:O89086
            PhosphoSite:O89086 REPRODUCTION-2DPAGE:IPI00130883 PaxDb:O89086
            PRIDE:O89086 Ensembl:ENSMUST00000115615 Ensembl:ENSMUST00000115619
            Ensembl:ENSMUST00000115621 GeneID:19652 KEGG:mmu:19652
            NextBio:296916 Bgee:O89086 CleanEx:MM_RBM3 Genevestigator:O89086
            GermOnline:ENSMUSG00000031167 Uniprot:O89086
        Length = 153

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC-V 82
             K+FVGGL + T ++ +E +F  FG I E VV+ D+ T RS+G+GF+TF  PE A  A   
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66

Query:    83 DAAPVIDGRR 92
                  +DGR+
Sbjct:    67 MNGESLDGRQ 76


>UNIPROTKB|G3V6P6 [details] [associations]
            symbol:Rbm3 "Putative RNA-binding protein 3" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0009409 "response to cold"
            evidence=IEA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large
            subunit binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620145 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            RefSeq:NP_446148.1 UniGene:Rn.18057 GeneID:114488 KEGG:rno:114488
            NextBio:618509 EMBL:CH474078 Ensembl:ENSRNOT00000007367
            Uniprot:G3V6P6
        Length = 156

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC-V 82
             K+FVGGL + T ++ +E +F  FG I E VV+ D+ T RS+G+GF+TF  PE A  A   
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66

Query:    83 DAAPVIDGRR 92
                  +DGR+
Sbjct:    67 MNGESLDGRQ 76


>UNIPROTKB|G3V6A4 [details] [associations]
            symbol:Hnrpd "Protein Hnrpd" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620365 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 RefSeq:NP_001076009.1
            UniGene:Rn.94022 GeneID:79256 KEGG:rno:79256 CTD:79256
            NextBio:614748 EMBL:CH474022 Ensembl:ENSRNOT00000003158
            Uniprot:G3V6A4
        Length = 304

 Score = 158 (60.7 bits), Expect = 3.6e-11, P = 3.6e-11
 Identities = 26/68 (38%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FG++++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   156 KEHKLNGK 163

 Score = 117 (46.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236


>TAIR|locus:2129590 [details] [associations]
            symbol:AT4G14300 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002687 GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:Z97335 EMBL:AL161538 GO:GO:0003676
            GO:GO:0030529 eggNOG:COG0724 HOGENOM:HOG000234441 KO:K14411
            HSSP:Q61474 EMBL:AJ303457 EMBL:AK226323 IPI:IPI00517003 PIR:G71404
            RefSeq:NP_193166.2 UniGene:At.33295 ProteinModelPortal:Q8W034
            SMR:Q8W034 IntAct:Q8W034 MINT:MINT-1163850 STRING:Q8W034
            PaxDb:O23288 PRIDE:Q8W034 EnsemblPlants:AT4G14300.1 GeneID:827071
            KEGG:ath:AT4G14300 TAIR:At4g14300 InParanoid:Q8W034 OMA:YGATNIP
            PhylomeDB:Q8W034 ProtClustDB:CLSN2913105 Genevestigator:Q8W034
            Uniprot:Q8W034
        Length = 411

 Score = 161 (61.7 bits), Expect = 3.7e-11, P = 3.7e-11
 Identities = 29/80 (36%), Positives = 50/80 (62%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D+   K+FVGG++WET ++ + ++F  +GE+ +A+V+ DK TGR +G+GFV F +P + +
Sbjct:     2 DSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDP-SVL 60

Query:    79 KACVDAAPVIDGRRANCNLA 98
                +     ID R  +   A
Sbjct:    61 DRVLQEKHSIDTREVDVKRA 80

 Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             K+FVGGL      E   +YFE +G + +  ++ D+AT R +G+GFV+F   +A
Sbjct:   111 KIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDA 163


>UNIPROTKB|F1NCV5 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00700000104347 OMA:QHPPADN
            EMBL:AADN02009038 EMBL:AADN02009039 IPI:IPI00822447
            Ensembl:ENSGALT00000038016 Uniprot:F1NCV5
        Length = 338

 Score = 159 (61.0 bits), Expect = 3.8e-11, P = 3.8e-11
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K    
Sbjct:    67 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 126

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:   127 KEHKLDGK 134

 Score = 110 (43.8 bits), Expect = 9.2e-06, P = 9.2e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   152 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 207


>DICTYBASE|DDB_G0275027 [details] [associations]
            symbol:DDB_G0275027 "SRA stem-loop-interacting
            RNA-binding protein, mitochondrial" species:44689 "Dictyostelium
            discoideum" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0275027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000013 eggNOG:COG0724
            ProtClustDB:CLSZ2430003 RefSeq:XP_643856.1
            ProteinModelPortal:Q86I71 PRIDE:Q86I71 EnsemblProtists:DDB0167377
            GeneID:8619907 KEGG:ddi:DDB_G0275027 InParanoid:Q86I71 OMA:QFESKES
            Uniprot:Q86I71
        Length = 91

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 34/88 (38%), Positives = 50/88 (56%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FV  L W   KE ++ +F QFG I +  V+ D+ T RSKG+GFV F   E+   A ++
Sbjct:     5 KIFVTRLPWSVCKEALKNHFSQFGNIKDCYVVLDRVTKRSKGFGFVQFESKESVQNA-IN 63

Query:    84 AAPVIDGRRANCNLACLGVQRSKPSTPK 111
             +   I+GR+   N A    +  K +TPK
Sbjct:    64 SDNEINGRKLVVNEAL--AKDFKENTPK 89


>UNIPROTKB|F6RBQ9 [details] [associations]
            symbol:F6RBQ9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043023 "ribosomal large subunit binding" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0006412
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 GO:GO:0035196 GO:GO:0043023
            OMA:SDAMRAM EMBL:DAAA02073061 IPI:IPI00691523
            Ensembl:ENSBTAT00000024034 Uniprot:F6RBQ9
        Length = 160

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 31/70 (44%), Positives = 43/70 (61%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC-V 82
             K+FVGGL + T +  +E +F  FG I E VV+ D+ T RS+G+GF+TF  PE A  A   
Sbjct:     7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66

Query:    83 DAAPVIDGRR 92
                  +DGR+
Sbjct:    67 MNGESLDGRQ 76


>UNIPROTKB|K7ENX8 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
        Length = 89

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 29/70 (41%), Positives = 49/70 (70%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRR 92
                  +DGR+
Sbjct:    67 MNGKSVDGRQ 76


>UNIPROTKB|I3LQ36 [details] [associations]
            symbol:I3LQ36 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:CU210877
            Ensembl:ENSSSCT00000005974 Uniprot:I3LQ36
        Length = 161

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 32/76 (42%), Positives = 46/76 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC-V 82
             K+FVGGL + T ++ +E +F  FG I E VV+ D  T RS+G+GF+TF  PE A  A   
Sbjct:     7 KLFVGGLNFNTYEQALEDHFSSFGPIFEVVVVKDWETRRSQGFGFITFTNPEHASNAMRA 66

Query:    83 DAAPVIDGRRANCNLA 98
                  +DGR+ + + A
Sbjct:    67 TNGESLDGRQIHVDHA 82


>UNIPROTKB|P60826 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:10029 "Cricetulus griseus" [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 EMBL:AY359860 RefSeq:NP_001231002.1
            ProteinModelPortal:P60826 SMR:P60826 PRIDE:P60826 GeneID:100689075
            CTD:1153 Uniprot:P60826
        Length = 172

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++ +E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>MGI|MGI:893588 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006950 "response to
            stress" evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017148
            "negative regulation of translation" evidence=IDA] [GO:0030371
            "translation repressor activity" evidence=IDA] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=ISO] [GO:0048255 "mRNA stabilization"
            evidence=ISO] [GO:0070181 "SSU rRNA binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:893588 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 HOGENOM:HOG000276232 OMA:ENRSRGY
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:D78135 EMBL:AK014655
            EMBL:AK132584 EMBL:BC075699 IPI:IPI00121073 RefSeq:NP_031731.1
            UniGene:Mm.17898 ProteinModelPortal:P60824 SMR:P60824 STRING:P60824
            PhosphoSite:P60824 PaxDb:P60824 PRIDE:P60824
            Ensembl:ENSMUST00000105365 GeneID:12696 KEGG:mmu:12696
            UCSC:uc007gce.1 GeneTree:ENSGT00700000104309 InParanoid:P60824
            NextBio:281950 Bgee:P60824 CleanEx:MM_CIRBP Genevestigator:P60824
            GermOnline:ENSMUSG00000045193 Uniprot:P60824
        Length = 172

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++ +E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>RGD|620756 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO;ISS] [GO:0005634
            "nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009411 "response to UV" evidence=ISO;ISS]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO;ISS]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030371 "translation repressor activity" evidence=ISO;ISS]
            [GO:0034063 "stress granule assembly" evidence=ISO;ISS] [GO:0045727
            "positive regulation of translation" evidence=ISO;ISS] [GO:0048255
            "mRNA stabilization" evidence=ISO;ISS] [GO:0070181 "SSU rRNA
            binding" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620756 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0000166 GO:GO:0030371
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724
            HOVERGEN:HBG107480 GO:GO:0070181 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309 EMBL:AB000362
            IPI:IPI00201031 UniGene:Rn.28931 ProteinModelPortal:P60825
            SMR:P60825 IntAct:P60825 STRING:P60825 PRIDE:P60825
            Ensembl:ENSRNOT00000021648 UCSC:RGD:620756 InParanoid:P60825
            Genevestigator:P60825 GermOnline:ENSRNOG00000015999 Uniprot:P60825
        Length = 172

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++ +E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|I3LPG0 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
            "polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
            EMBL:FP690339 Ensembl:ENSSSCT00000027694 Uniprot:I3LPG0
        Length = 332

 Score = 158 (60.7 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:    73 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 132

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   133 VCEIHFHEINNKMVECKKA 151

 Score = 105 (42.0 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query:    37 ETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDAAPVIDGRRANCN 96
             E + +YF QFGE  E +V+ D  T RS+G+GFVTF +     K    +   +D +  +  
Sbjct:     1 EGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60

Query:    97 LA 98
             +A
Sbjct:    61 VA 62


>UNIPROTKB|G3V6A5 [details] [associations]
            symbol:Hnrpd "Heterogeneous nuclear ribonucleoprotein D,
            isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 RefSeq:NP_001076008.1 UniGene:Rn.94022 GeneID:79256
            KEGG:rno:79256 CTD:79256 NextBio:614748 EMBL:CH474022
            Ensembl:ENSRNOT00000003173 Uniprot:G3V6A5
        Length = 334

 Score = 158 (60.7 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 26/68 (38%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FG++++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   137 KEHKLNGK 144

 Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   162 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217


>TAIR|locus:2079276 [details] [associations]
            symbol:ATRZ-1A species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA;IDA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0009409 "response to cold" evidence=IMP] [GO:0009631 "cold
            acclimation" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
            PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0005829
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0009631
            GO:GO:0003676 Gene3D:4.10.60.10 EMBL:AP001298 HOGENOM:HOG000276232
            UniGene:At.48707 HSSP:Q61474 KO:K12885 EMBL:AY054613 EMBL:AF424613
            EMBL:AY072457 EMBL:AK221725 EMBL:AK227088 IPI:IPI00530350
            RefSeq:NP_189273.1 ProteinModelPortal:Q9LIN3 SMR:Q9LIN3
            IntAct:Q9LIN3 STRING:Q9LIN3 PRIDE:Q9LIN3 EnsemblPlants:AT3G26420.1
            GeneID:822246 KEGG:ath:AT3G26420 TAIR:At3g26420 InParanoid:Q9LIN3
            OMA:SSKDDRY PhylomeDB:Q9LIN3 ProtClustDB:CLSN2723027
            Genevestigator:Q9LIN3 Uniprot:Q9LIN3
        Length = 245

 Score = 153 (58.9 bits), Expect = 5.0e-11, P = 5.0e-11
 Identities = 31/74 (41%), Positives = 47/74 (63%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D  Y + F+GGLAW T    +   FE++G ++EA V+ DK +GRS+G+GF+TF E +A  
Sbjct:     4 DPEY-RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMD 62

Query:    79 KACVDAAPV-IDGR 91
             +A      + +DGR
Sbjct:    63 EAIAAMNGMDLDGR 76


>POMBASE|SPAC140.02 [details] [associations]
            symbol:gar2 "nucleolar protein required for rRNA
            processing" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005732 "small nucleolar ribonucleoprotein complex"
            evidence=ISS] [GO:0006364 "rRNA processing" evidence=IMP]
            [GO:0007000 "nucleolus organization" evidence=IMP] [GO:0042254
            "ribosome biogenesis" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            PomBase:SPAC140.02 EMBL:CU329670 GO:GO:0005730
            GenomeReviews:CU329670_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0006364 eggNOG:COG0724 GO:GO:0007000
            GO:GO:0005732 EMBL:Z48166 PIR:S55785 RefSeq:NP_593531.1
            ProteinModelPortal:P41891 STRING:P41891 PRIDE:P41891
            EnsemblFungi:SPAC140.02.1 GeneID:2542869 KEGG:spo:SPAC140.02
            KO:K11294 OMA:VITDRES OrthoDB:EOG422DTZ NextBio:20803909
            Uniprot:P41891
        Length = 500

 Score = 161 (61.7 bits), Expect = 5.4e-11, P = 5.4e-11
 Identities = 37/76 (48%), Positives = 48/76 (63%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             VFVG L+W    + + + FE++G I+ A VI D  +GRSKGYG+V F  PEAA KA V A
Sbjct:   265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAA-KAAVAA 323

Query:    85 --APVIDGRRANCNLA 98
                  IDGR  N +L+
Sbjct:   324 NGTKEIDGRMVNLDLS 339

 Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             VFVG L++   ++ +   F   G+I    + TD  +GR KG+G+VTF + ++A K CV+
Sbjct:   368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK-CVE 425


>RGD|620365 [details] [associations]
            symbol:Hnrpd "heterogeneous nuclear ribonucleoprotein D"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000291 "nuclear-transcribed mRNA catabolic
            process, exonucleolytic" evidence=TAS] [GO:0003723 "RNA binding"
            evidence=ISO;ISS] [GO:0003729 "mRNA binding" evidence=TAS]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
            evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA;ISO;ISS] [GO:0042162 "telomeric DNA binding"
            evidence=IEA;ISO;ISS] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA;ISO] [GO:0048255 "mRNA stabilization" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620365 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0006913 GO:GO:0048255 GO:GO:0030529
            GO:GO:0042162 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044
            OrthoDB:EOG49W2FZ GermOnline:ENSRNOG00000002292 InterPro:IPR012956
            Pfam:PF08143 EMBL:AB046615 EMBL:AB046616 EMBL:AB046617
            EMBL:AB046618 IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384
            IPI:IPI00231385 RefSeq:NP_001076008.1 RefSeq:NP_001076009.1
            RefSeq:NP_001076010.1 RefSeq:NP_077380.2 UniGene:Rn.94022
            ProteinModelPortal:Q9JJ54 SMR:Q9JJ54 STRING:Q9JJ54
            PhosphoSite:Q9JJ54 PRIDE:Q9JJ54 GeneID:79256 KEGG:rno:79256
            UCSC:RGD:620365 CTD:79256 InParanoid:Q9JJ54 NextBio:614748
            ArrayExpress:Q9JJ54 Genevestigator:Q9JJ54 GO:GO:0000291
            Uniprot:Q9JJ54
        Length = 353

 Score = 158 (60.7 bits), Expect = 5.5e-11, P = 5.5e-11
 Identities = 26/68 (38%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FG++++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   156 KEHKLNGK 163

 Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236


>UNIPROTKB|Q9JJ54 [details] [associations]
            symbol:Hnrnpd "Heterogeneous nuclear ribonucleoprotein D0"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0005829
            GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0006913 GO:GO:0048255 GO:GO:0030529 GO:GO:0042162
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044 OrthoDB:EOG49W2FZ
            GermOnline:ENSRNOG00000002292 InterPro:IPR012956 Pfam:PF08143
            EMBL:AB046615 EMBL:AB046616 EMBL:AB046617 EMBL:AB046618
            IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384 IPI:IPI00231385
            RefSeq:NP_001076008.1 RefSeq:NP_001076009.1 RefSeq:NP_001076010.1
            RefSeq:NP_077380.2 UniGene:Rn.94022 ProteinModelPortal:Q9JJ54
            SMR:Q9JJ54 STRING:Q9JJ54 PhosphoSite:Q9JJ54 PRIDE:Q9JJ54
            GeneID:79256 KEGG:rno:79256 UCSC:RGD:620365 CTD:79256
            InParanoid:Q9JJ54 NextBio:614748 ArrayExpress:Q9JJ54
            Genevestigator:Q9JJ54 GO:GO:0000291 Uniprot:Q9JJ54
        Length = 353

 Score = 158 (60.7 bits), Expect = 5.5e-11, P = 5.5e-11
 Identities = 26/68 (38%), Positives = 46/68 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ ++ YF +FG++++  +  D  TGRS+G+GFV F+E E+  K    
Sbjct:    96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155

Query:    84 AAPVIDGR 91
                 ++G+
Sbjct:   156 KEHKLNGK 163

 Score = 117 (46.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+ +T +E + +YF  FGE+    +  D  T + +G+ F+TF+E E   K
Sbjct:   181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 236


>UNIPROTKB|Q9XSY6 [details] [associations]
            symbol:Q9XSY6 "HnRNP A/B related protein" species:9685
            "Felis catus" [GO:0001837 "epithelial to mesenchymal transition"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0001837 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
            Pfam:PF08143 EMBL:AF153444 ProteinModelPortal:Q9XSY6 Uniprot:Q9XSY6
        Length = 279

 Score = 155 (59.6 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 27/68 (39%), Positives = 44/68 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+W+T K+ ++ YF +FGE+++  +     TGRSKG+GF+ F++  +  K    
Sbjct:    65 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQ 124

Query:    84 AAPVIDGR 91
                 +DGR
Sbjct:   125 KEHRLDGR 132

 Score = 124 (48.7 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVIT-DKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  E  +E + +YF +FGEI EA+ +  D  T + +G+ F+TF+E E   K   
Sbjct:   149 KIFVGGLNPEATEEKIREYFGEFGEI-EAIELPMDPKTNKRRGFVFITFKEEEPVKKVLE 207

Query:    83 DAAPVIDGRRANCNLA 98
                  I G +    +A
Sbjct:   208 KKFHTISGSKCEIKVA 223


>UNIPROTKB|B4E2X2 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC004221 HOVERGEN:HBG107480 EMBL:AC004258 UniGene:Hs.618145
            UniGene:Hs.634522 HGNC:HGNC:1982 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:AK304470 IPI:IPI00909097
            SMR:B4E2X2 STRING:B4E2X2 Ensembl:ENST00000413636 UCSC:uc010xgl.1
            Uniprot:B4E2X2
        Length = 263

 Score = 154 (59.3 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|J3KQA8 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            ProteinModelPortal:J3KQA8 Ensembl:ENST00000420780 Uniprot:J3KQA8
        Length = 102

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/80 (40%), Positives = 52/80 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGRRANCNLACLGV 102
             A P  +DGR     +  LG+
Sbjct:    74 ARPHKVDGRVVEATMI-LGI 92


>RGD|620145 [details] [associations]
            symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein 3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0006417 "regulation of translation"
            evidence=ISO;ISS] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0009409 "response to cold" evidence=ISO] [GO:0015934 "large
            ribosomal subunit" evidence=IDA] [GO:0030425 "dendrite"
            evidence=IDA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=ISO] [GO:0043023 "ribosomal large
            subunit binding" evidence=ISO] [GO:0045727 "positive regulation of
            translation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727
            eggNOG:COG0724 HOVERGEN:HBG107480 HSSP:P09651 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186
            EMBL:FM093406 EMBL:AF355190 IPI:IPI00367437 IPI:IPI00955177
            RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0
            MINT:MINT-4611770 STRING:Q925G0 PRIDE:Q925G0 GeneID:114488
            KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509
            Genevestigator:Q925G0 Uniprot:Q925G0
        Length = 155

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/72 (44%), Positives = 47/72 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAA---MKA 80
             K+FVGGL + T ++ +E +F  FG I E VV+ D+ T RS+G+GF+TF  PE A   M+A
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRA 66

Query:    81 CVDAAPVIDGRR 92
                 +  +DGR+
Sbjct:    67 MNGES--LDGRQ 76


>ZFIN|ZDB-GENE-040426-1268 [details] [associations]
            symbol:msi2b "musashi homolog 2b (Drosophila)"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 HSSP:Q61474 EMBL:BX000438
            EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251
            IPI:IPI00481779 RefSeq:NP_957403.1 UniGene:Dr.82489 SMR:Q7SXT6
            STRING:Q7SXT6 Ensembl:ENSDART00000100194 GeneID:394084
            KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:NYISASP
            NextBio:20815041 Uniprot:Q7SXT6
        Length = 408

 Score = 159 (61.0 bits), Expect = 6.0e-11, P = 6.0e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   107 TRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEK 166

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   167 VCEIHFHEINNKMVECKKA 185

 Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 28/75 (37%), Positives = 46/75 (61%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GFVTF +  +  K    
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81

Query:    84 AAPVIDGRRANCNLA 98
                 +D +  +  +A
Sbjct:    82 PHHELDSKTIDPKVA 96


>ZFIN|ZDB-GENE-030826-25 [details] [associations]
            symbol:msi2a "musashi homolog 2a (Drosophila)"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 OrthoDB:EOG48GW3J HSSP:Q61474
            EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 IPI:IPI00489753
            RefSeq:NP_997961.1 UniGene:Dr.32677 SMR:Q7ZW10
            Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096
            GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10
            OMA:MEADASQ NextBio:20785547 Uniprot:Q7ZW10
        Length = 388

 Score = 158 (60.7 bits), Expect = 6.9e-11, P = 6.9e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   107 TRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEK 166

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   167 VCEIHFHEINNKMVECKKA 185

 Score = 151 (58.2 bits), Expect = 4.0e-10, P = 4.0e-10
 Identities = 27/75 (36%), Positives = 46/75 (61%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T  +++  YF +FGEI E +V+ D  T RS+G+GF+TF +  +  K    
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81

Query:    84 AAPVIDGRRANCNLA 98
                 +D +  +  +A
Sbjct:    82 PHHELDSKTIDPKVA 96


>DICTYBASE|DDB_G0275971 [details] [associations]
            symbol:DDB_G0275971 "RNA recognition motif-containing
            protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0275971
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000013
            eggNOG:NOG260394 RefSeq:XP_643377.1 ProteinModelPortal:Q552K5
            EnsemblProtists:DDB0203538 GeneID:8620261 KEGG:ddi:DDB_G0275971
            InParanoid:Q552K5 Uniprot:Q552K5
        Length = 699

 Score = 162 (62.1 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             TK+FVGG++W+  + T++ YF QFG +LE  +I D  T +SKGYGF+TF   ++  K
Sbjct:   103 TKIFVGGISWKADENTLKTYFLQFGNVLECKIIMDYNTNKSKGYGFITFENEDSIEK 159


>ZFIN|ZDB-GENE-030131-5841 [details] [associations]
            symbol:cirbp "cold inducible RNA binding protein"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0009409 "response
            to cold" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-5841 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104309
            EMBL:BX649404 IPI:IPI00758644 PRIDE:F1R6L3
            Ensembl:ENSDART00000105405 ArrayExpress:F1R6L3 Bgee:F1R6L3
            Uniprot:F1R6L3
        Length = 224

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 29/69 (42%), Positives = 46/69 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+++T ++++E+ F ++G I +  VI D+ T RS+G+GFVTF  PE A  A   
Sbjct:    24 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 83

Query:    84 A-APVIDGR 91
                  +DGR
Sbjct:    84 MNGKQVDGR 92


>UNIPROTKB|F1LRH1 [details] [associations]
            symbol:Msi1 "RNA-binding protein Musashi homolog 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0005844 GeneTree:ENSGT00700000104255
            IPI:IPI00202463 Ensembl:ENSRNOT00000001532 ArrayExpress:F1LRH1
            Uniprot:F1LRH1
        Length = 329

 Score = 156 (60.0 bits), Expect = 7.6e-11, P = 7.6e-11
 Identities = 31/79 (39%), Positives = 46/79 (58%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E ++ YFEQFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:    73 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK 132

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   133 VCEIHFHEINNKMVECKKA 151

 Score = 111 (44.1 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query:    37 ETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDAAPVIDGRRANCN 96
             E + +YF QFGE+ E +V+ D  T RS+G+GFVTF +     K    +   +D +  +  
Sbjct:     1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60

Query:    97 LA 98
             +A
Sbjct:    61 VA 62


>UNIPROTKB|F1N2T0 [details] [associations]
            symbol:HNRPDL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
            OMA:QHPPADN EMBL:DAAA02018246 IPI:IPI00697542 UniGene:Bt.23277
            PRIDE:F1N2T0 Ensembl:ENSBTAT00000019699 ArrayExpress:F1N2T0
            Uniprot:F1N2T0
        Length = 420

 Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K    
Sbjct:   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:   209 KEHKLDGK 216

 Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289


>UNIPROTKB|E2QRT0 [details] [associations]
            symbol:HNRPDL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 CTD:9987
            GeneTree:ENSGT00700000104347 KO:K13044 OMA:QHPPADN
            EMBL:AAEX03016723 RefSeq:XP_858404.1 Ensembl:ENSCAFT00000014224
            GeneID:476976 KEGG:cfa:476976 NextBio:20852539 Uniprot:E2QRT0
        Length = 420

 Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K    
Sbjct:   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:   209 KEHKLDGK 216

 Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289


>UNIPROTKB|O14979 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0008143 "poly(A)
            RNA binding" evidence=IDA] [GO:0034046 "poly(G) RNA binding"
            evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=NAS]
            [GO:0006396 "RNA processing" evidence=NAS] [GO:0010468 "regulation
            of gene expression" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:D89678 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0005681
            GO:GO:0003723 GO:GO:0006396 GO:GO:0003690 GO:GO:0003697
            GO:GO:0010468 GO:GO:0034046 eggNOG:COG0724 GO:GO:0008143
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987
            KO:K13044 EMBL:AB017019 EMBL:D89092 EMBL:AB066484 EMBL:CR407623
            EMBL:AC124016 EMBL:AB017018 EMBL:BC007392 EMBL:BC011714
            EMBL:BC071944 EMBL:AY453824 IPI:IPI00011274 IPI:IPI00045498
            IPI:IPI00845282 PIR:JW0079 RefSeq:NP_001193929.1 RefSeq:NP_112740.1
            UniGene:Hs.527105 UniGene:Hs.731516 ProteinModelPortal:O14979
            SMR:O14979 IntAct:O14979 STRING:O14979 PhosphoSite:O14979
            PaxDb:O14979 PRIDE:O14979 DNASU:9987 Ensembl:ENST00000295470
            Ensembl:ENST00000349655 Ensembl:ENST00000502762 GeneID:9987
            KEGG:hsa:9987 UCSC:uc003hmr.3 GeneCards:GC04M083343 HGNC:HGNC:5037
            MIM:607137 neXtProt:NX_O14979 PharmGKB:PA29362 InParanoid:O14979
            OMA:QHPPADN OrthoDB:EOG49W2FZ PhylomeDB:O14979 ChiTaRS:HNRPDL
            GenomeRNAi:9987 NextBio:37714 ArrayExpress:O14979 Bgee:O14979
            CleanEx:HS_HNRPDL Genevestigator:O14979 Uniprot:O14979
        Length = 420

 Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
 Identities = 26/68 (38%), Positives = 45/68 (66%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T K+ + +Y  +FGE+++  + TD  TGRS+G+GFV F++  +  K    
Sbjct:   149 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 208

Query:    84 AAPVIDGR 91
                 +DG+
Sbjct:   209 KEHKLDGK 216

 Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             KVFVGGL+ +T +E +++YF  FGEI    +  D  T   +G+ F+T+ + E   K
Sbjct:   234 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKK 289


>UNIPROTKB|D6W5Y5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH471139 EMBL:AC004221 EMBL:AC004258 IPI:IPI00641579
            UniGene:Hs.618145 UniGene:Hs.634522 HGNC:HGNC:1982
            HOGENOM:HOG000276232 ChiTaRS:CIRBP ProteinModelPortal:D6W5Y5
            PRIDE:D6W5Y5 Ensembl:ENST00000587323 Ensembl:ENST00000587896
            Ensembl:ENST00000588230 Ensembl:ENST00000589710 ArrayExpress:D6W5Y5
            Bgee:D6W5Y5 Uniprot:D6W5Y5
        Length = 297

 Score = 154 (59.3 bits), Expect = 9.3e-11, P = 9.3e-11
 Identities = 30/76 (39%), Positives = 51/76 (67%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|F8VZ49 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 EMBL:AC078778
            HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022460
            ProteinModelPortal:F8VZ49 SMR:F8VZ49 PRIDE:F8VZ49
            Ensembl:ENST00000548688 ArrayExpress:F8VZ49 Bgee:F8VZ49
            Uniprot:F8VZ49
        Length = 231

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    34 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 92

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    93 ARPHKVDGR 101

 Score = 141 (54.7 bits), Expect = 9.9e-10, P = 9.9e-10
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   122 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 181

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   182 VIQKYHTVNGH--NCEV 196


>UNIPROTKB|F1M5N1 [details] [associations]
            symbol:F1M5N1 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00567689
            ProteinModelPortal:F1M5N1 Ensembl:ENSRNOT00000023344 Uniprot:F1M5N1
        Length = 207

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    11 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 69

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    70 ARPHKVDGR 78

 Score = 123 (48.4 bits), Expect = 8.2e-08, P = 8.2e-08
 Identities = 23/76 (30%), Positives = 46/76 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFG--EILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             K+FVG +  +T++  +  YF Q+G  E++E  ++TD+ +G+ +G+ FVTF + ++  K  
Sbjct:   101 KIFVGAIKEDTEEHHLRDYFGQYGKTEVIE--IVTDRGSGKKRGFAFVTFDDRDSVDKIV 158

Query:    82 VDAAPVIDGRRANCNL 97
             +     ++G   NC +
Sbjct:   159 IQKYHTVNGH--NCEV 172


>ASPGD|ASPL0000040642 [details] [associations]
            symbol:AN2989 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BN001306
            GO:GO:0003676 HOGENOM:HOG000276232 OMA:ISEMDGK
            ProteinModelPortal:C8VIY5 EnsemblFungi:CADANIAT00010091
            Uniprot:C8VIY5
        Length = 128

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 34/71 (47%), Positives = 46/71 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFR-EPEA--AMKA 80
             K+F+GGLAW T  + + + F ++G I EAVV+ D+ T RS+G+GFV F  EPEA  AM A
Sbjct:     3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62

Query:    81 CVDAAPVIDGR 91
               +     DGR
Sbjct:    63 MNNQE--FDGR 71


>UNIPROTKB|F8W646 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022306
            ProteinModelPortal:F8W646 SMR:F8W646 PRIDE:F8W646
            Ensembl:ENST00000547708 ArrayExpress:F8W646 Bgee:F8W646
            Uniprot:F8W646
        Length = 156

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82


>UNIPROTKB|D4A2D2 [details] [associations]
            symbol:D4A2D2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
            InterPro:IPR021662 Pfam:PF11627 GeneTree:ENSGT00550000074566
            IPI:IPI00559583 ProteinModelPortal:D4A2D2
            Ensembl:ENSRNOT00000032337 Uniprot:D4A2D2
        Length = 262

 Score = 152 (58.6 bits), Expect = 9.5e-11, P = 9.5e-11
 Identities = 31/69 (44%), Positives = 47/69 (68%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL +ET  E++  +FEQ+G + E VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLTFETTDESLRSHFEQWGTLTECVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 120 (47.3 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 24/80 (30%), Positives = 45/80 (56%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG+  +T++  +  Y EQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K  + 
Sbjct:   101 KIFVGGIKEDTEEHYLRDYSEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDYDSVDKIVIR 160

Query:    84 AAPVIDGRRANCNLACLGVQ 103
                 ++    NC    L  Q
Sbjct:   161 KYHTVNDH--NCVRKALSKQ 178


>CGD|CAL0003460 [details] [associations]
            symbol:orf19.5989 species:5476 "Candida albicans" [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005849 "mRNA
            cleavage factor complex" evidence=IEA] [GO:0006379 "mRNA cleavage"
            evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            CGD:CAL0003460 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG0724 KO:K14411
            RefSeq:XP_723052.1 RefSeq:XP_723199.1 ProteinModelPortal:Q5ANB5
            SMR:Q5ANB5 STRING:Q5ANB5 GeneID:3635162 GeneID:3635323
            KEGG:cal:CaO19.13410 KEGG:cal:CaO19.5989 Uniprot:Q5ANB5
        Length = 475

 Score = 158 (60.7 bits), Expect = 1.0e-10, P = 1.0e-10
 Identities = 26/68 (38%), Positives = 49/68 (72%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K F+GGL+W+T +E +  +F+++G I++  ++ D ATGRS+G+GF+TF + ++ + A + 
Sbjct:   163 KCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKS-VDALLK 221

Query:    84 AAPVIDGR 91
                V+DG+
Sbjct:   222 DRHVLDGK 229

 Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 28/68 (41%), Positives = 44/68 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG+     +E  + +F QFG+I++  ++ DK TGRS+G+GFVT+  P A  K CV+
Sbjct:   247 KIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVN 306

Query:    84 AAPVIDGR 91
                 + G+
Sbjct:   307 KYLTLKGK 314


>TAIR|locus:2019622 [details] [associations]
            symbol:GR-RBP5 "AT1G74230" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005524
            "ATP binding" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005507 eggNOG:COG0724
            EMBL:AC020579 HSSP:Q14103 KO:K12741 EMBL:BT002037 EMBL:BT006315
            IPI:IPI00516639 PIR:F96770 RefSeq:NP_177563.1 UniGene:At.18152
            ProteinModelPortal:Q9C909 SMR:Q9C909 PaxDb:Q9C909 PRIDE:Q9C909
            EnsemblPlants:AT1G74230.1 GeneID:843763 KEGG:ath:AT1G74230
            GeneFarm:3954 TAIR:At1g74230 InParanoid:Q9C909 OMA:TERGSGF
            ProtClustDB:CLSN2914559 Genevestigator:Q9C909 Uniprot:Q9C909
        Length = 289

 Score = 153 (58.9 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 29/76 (38%), Positives = 47/76 (61%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             +K+FVGG+++ T +  + + F ++GE+++A +I D+ TGRS+G+ FVTF   E A  A  
Sbjct:    34 SKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ 93

Query:    83 DAAPVIDGRRANCNLA 98
                  + GRR   N A
Sbjct:    94 LDGQDLHGRRIRVNYA 109


>ZFIN|ZDB-GENE-050320-86 [details] [associations]
            symbol:msi1 "musashi homolog 1 (Drosophila)"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central
            nervous system development" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 Uniprot:J4C3V8
        Length = 349

 Score = 155 (59.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 30/79 (37%), Positives = 47/79 (59%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             T   K+FVGGL+  T  E +++YF+QFG++ +A+++ DK T R +G+GFVTF   +   K
Sbjct:   106 TRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEK 165

Query:    80 ACVDAAPVIDGRRANCNLA 98
              C      I+ +   C  A
Sbjct:   166 VCEIHFHEINNKMVECKKA 184

 Score = 153 (58.9 bits), Expect = 1.9e-10, P = 1.9e-10
 Identities = 28/75 (37%), Positives = 47/75 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E ++ YF +FGE+ E++V+ D  T RS+G+GFVTF +     K    
Sbjct:    21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80

Query:    84 AAPVIDGRRANCNLA 98
                 +D +  +  +A
Sbjct:    81 TRHELDSKTIDPKVA 95


>UNIPROTKB|K7EJM5 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 EMBL:AL109811 HGNC:HGNC:11571
            Ensembl:ENST00000473118 Uniprot:K7EJM5
        Length = 201

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ +++YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>UNIPROTKB|K7EN94 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 EMBL:AL109811 HGNC:HGNC:11571
            Ensembl:ENST00000476201 Uniprot:K7EN94
        Length = 222

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ +++YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   147 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 205

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   206 RHMIDGRWCDCKL 218


>TAIR|locus:2047685 [details] [associations]
            symbol:AT2G19380 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR003604 InterPro:IPR012677
            InterPro:IPR015880 Pfam:PF00076 PROSITE:PS50102 SMART:SM00355
            SMART:SM00360 SMART:SM00451 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0005622 EMBL:AC003058 eggNOG:NOG253936 InterPro:IPR014898
            Pfam:PF08790 HSSP:Q60900 IPI:IPI00545777 PIR:T01286
            RefSeq:NP_565450.1 UniGene:At.50083 ProteinModelPortal:O64571
            SMR:O64571 PRIDE:O64571 EnsemblPlants:AT2G19380.1 GeneID:816456
            KEGG:ath:AT2G19380 TAIR:At2g19380 HOGENOM:HOG000114996
            InParanoid:O64571 OMA:ESADRDI PhylomeDB:O64571
            ProtClustDB:CLSN2914947 ArrayExpress:O64571 Genevestigator:O64571
            Uniprot:O64571
        Length = 613

 Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/80 (41%), Positives = 44/80 (55%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D     +FV G  W+T +E ++  FE +GEI E  V+ DK TGR KGYGFV F+  + A 
Sbjct:   404 DIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTRKGAR 463

Query:    79 KACVDAAPVIDGRRANCNLA 98
             +A       +  R   CNLA
Sbjct:   464 EALKRPEKRMYNRIVVCNLA 483


>UNIPROTKB|F1S420 [details] [associations]
            symbol:F1S420 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
            EMBL:CU914278 Ensembl:ENSSSCT00000015327 OMA:NHEVAGS Uniprot:F1S420
        Length = 300

 Score = 153 (58.9 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 24/56 (42%), Positives = 41/56 (73%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             K+FVGGL+W+T K+ ++ YF +FGE+++  +  D  TGRS+G+GF+ F++  +  K
Sbjct:    83 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 138


>UNIPROTKB|F1N4K3 [details] [associations]
            symbol:F1N4K3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:DAAA02019527
            IPI:IPI00906169 Ensembl:ENSBTAT00000002951 OMA:HAINGHH
            Uniprot:F1N4K3
        Length = 329

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 34/76 (44%), Positives = 54/76 (71%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFR---EPEAAMKA 80
             K+F+GGL+++T +E++ KY++Q+GE+ + VV+ D A+ RS+G GFVTF    E +AAM A
Sbjct:    10 KLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEVDAAMAA 69

Query:    81 ---CVDAAPVIDGRRA 93
                 +D   V++ RRA
Sbjct:    70 RPHSIDGR-VLEPRRA 84

 Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 28/78 (35%), Positives = 47/78 (60%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  + +YFE++G+I    +ITD+ +GR +G+GFVTF + +   K 
Sbjct:    98 TLKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKI 157

Query:    81 CVDAAPVIDGRRANCNLA 98
              +     I+G  A    A
Sbjct:   158 VLQKYHAINGHHAEVRKA 175


>ZFIN|ZDB-GENE-040426-1546 [details] [associations]
            symbol:zgc:66127 "zgc:66127" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-1546 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00700000104376 EMBL:CABZ01055593
            EMBL:CABZ01000532 EMBL:CABZ01000533 EMBL:CABZ01000534
            EMBL:CABZ01000536 EMBL:CABZ01000539 EMBL:CABZ01000540
            EMBL:CABZ01085064 EMBL:CABZ01085065 EMBL:CABZ01085066
            EMBL:CABZ01085067 EMBL:CABZ01085068 EMBL:CABZ01088246
            EMBL:CABZ01088247 EMBL:CABZ01088248 EMBL:CABZ01088249
            EMBL:CABZ01088250 EMBL:CABZ01088251 EMBL:CABZ01092715
            EMBL:CABZ01092716 EMBL:CABZ01092717 EMBL:CABZ01092718
            IPI:IPI00971841 Ensembl:ENSDART00000082448 Bgee:E7FAB3
            Uniprot:E7FAB3
        Length = 411

 Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+      + A +D
Sbjct:    39 KLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSV-GEVDAAMD 97

Query:    84 AAP-VIDGRRANCNLACLGVQRSKP 107
             A P  +DGR      A      SKP
Sbjct:    98 ARPHKVDGRAVEPKRAVSREDSSKP 122

 Score = 135 (52.6 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 25/78 (32%), Positives = 48/78 (61%)

Query:    20 TTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMK 79
             +T  K+FVGG+  +T +E + +YF QFG+I E  ++T+K + + +G+ F+TF + +A  +
Sbjct:   126 STVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDR 185

Query:    80 ACVDAAPVIDGRRANCNL 97
               +     ++G   NC +
Sbjct:   186 IVIQKYHTVNGH--NCEV 201


>TAIR|locus:2159401 [details] [associations]
            symbol:GR-RBP3 "glycine-rich RNA-binding protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005507
            "copper ion binding" evidence=IDA] [GO:0006626 "protein targeting
            to mitochondrion" evidence=RCA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0034968 "histone lysine methylation"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005524
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0005507 EMBL:AB006696 eggNOG:COG0724
            HSSP:Q14103 KO:K12741 EMBL:AY060565 EMBL:AY125548 EMBL:AB493804
            IPI:IPI00542729 RefSeq:NP_200911.1 UniGene:At.24064
            ProteinModelPortal:Q9FNR1 SMR:Q9FNR1 STRING:Q9FNR1 PaxDb:Q9FNR1
            PRIDE:Q9FNR1 EnsemblPlants:AT5G61030.1 GeneID:836224
            KEGG:ath:AT5G61030 GeneFarm:3953 TAIR:At5g61030
            HOGENOM:HOG000029199 InParanoid:Q9FNR1 OMA:YANDRTS
            ProtClustDB:CLSN2916423 Genevestigator:Q9FNR1 Uniprot:Q9FNR1
        Length = 309

 Score = 153 (58.9 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 29/69 (42%), Positives = 49/69 (71%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             +K+F+GG+A+   ++++ + F ++GE+++  VI D+ TGRS+G+GFVTF   EAA  A +
Sbjct:    40 SKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSA-I 98

Query:    83 DAAPVIDGR 91
              A   +DGR
Sbjct:    99 QA---LDGR 104


>TAIR|locus:2055951 [details] [associations]
            symbol:AT2G22100 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002685
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC007232
            HSSP:Q14103 ProtClustDB:CLSN2914947 IPI:IPI00529413 PIR:A84609
            RefSeq:NP_565526.1 UniGene:At.39482 ProteinModelPortal:Q9SHZ5
            SMR:Q9SHZ5 EnsemblPlants:AT2G22100.1 GeneID:816745
            KEGG:ath:AT2G22100 TAIR:At2g22100 InParanoid:Q9SHZ5 OMA:VFESADR
            PhylomeDB:Q9SHZ5 ArrayExpress:Q9SHZ5 Genevestigator:Q9SHZ5
            Uniprot:Q9SHZ5
        Length = 382

 Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             D++   +FV GL W+T  E ++  FE +GEI E  V+ DK TGR+KG+GFV F+  + A 
Sbjct:   159 DSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGAR 218

Query:    79 KACVDAAPVIDGRRANCNLACLGVQRSKPSTPK 111
              A  +  P  + R  N  ++CL  +      P+
Sbjct:   219 AALKN--P--EKRMYNRTVSCLPARPFNSGKPR 247


>UNIPROTKB|H9KZV5 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0009411 "response to UV"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0048255 "mRNA stabilization" evidence=IEA] [GO:0070181 "SSU
            rRNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000019966 Uniprot:H9KZV5
        Length = 190

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+ VGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|H9L0U4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000029134 Uniprot:H9L0U4
        Length = 167

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+ VGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|H9L3B3 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000036191 Uniprot:H9L3B3
        Length = 172

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+ VGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    67 MNGKSVDGRQIRVDQA 82


>UNIPROTKB|O93235 [details] [associations]
            symbol:cirbp-a "Cold-inducible RNA-binding protein A"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=IMP] [GO:0009409
            "response to cold" evidence=IEP] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0016477
            "cell migration" evidence=IMP] [GO:0017148 "negative regulation of
            translation" evidence=ISS] [GO:0019899 "enzyme binding"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0030371
            "translation repressor activity" evidence=ISS] [GO:0034063 "stress
            granule assembly" evidence=ISS] [GO:0045727 "positive regulation of
            translation" evidence=ISS] [GO:0048255 "mRNA stabilization"
            evidence=ISS] [GO:0048793 "pronephros development"
            evidence=IEP;IMP] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0070181 "SSU rRNA binding" evidence=ISS] [GO:0072004 "kidney
            field specification" evidence=IMP] [GO:0005840 "ribosome"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0016477 GO:GO:0022008 GO:GO:0000166
            GO:GO:0030371 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0019899
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0007369
            GO:GO:0010494 GO:GO:0034063 GO:GO:0048793 EMBL:AB007597
            EMBL:AF278702 EMBL:BC041204 RefSeq:NP_001080069.1 UniGene:Xl.4515
            ProteinModelPortal:O93235 SMR:O93235 GeneID:379761 KEGG:xla:379761
            CTD:379761 Xenbase:XB-GENE-6256647 HOVERGEN:HBG107480 GO:GO:0070181
            GO:GO:0072004 GO:GO:0060212 Uniprot:O93235
        Length = 166

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL +ET ++ +E+ F ++G I E VV+ D+ T RS+G+GFVTF   + A  A + 
Sbjct:     6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65

Query:    84 A-APVIDGRRANCNLA 98
                  +DGR+   + A
Sbjct:    66 MNGKSVDGRQIRVDQA 81


>ZFIN|ZDB-GENE-050306-36 [details] [associations]
            symbol:zgc:110796 "zgc:110796" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050306-36 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HOVERGEN:HBG107480 KO:K14411
            GeneTree:ENSGT00390000002308 EMBL:CABZ01074485 EMBL:BC090772
            IPI:IPI00555445 RefSeq:NP_001013351.1 UniGene:Dr.87721 SMR:Q5CZN9
            STRING:Q5CZN9 Ensembl:ENSDART00000060532 GeneID:503755
            KEGG:dre:503755 eggNOG:NOG285314 InParanoid:Q5CZN9 OMA:MEADGTQ
            OrthoDB:EOG4GHZQT NextBio:20866299 Uniprot:Q5CZN9
        Length = 94

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 26/68 (38%), Positives = 44/68 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+W+T +E +++YF +FGE+ E +V+ D  T RS+G+GFVT+ +     K    
Sbjct:    23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYVDQTGVDKVLAQ 82

Query:    84 AAPVIDGR 91
                 +D +
Sbjct:    83 NRHELDSK 90


>UNIPROTKB|D4ACJ8 [details] [associations]
            symbol:Hnrnpa1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 IPI:IPI00780243 Ensembl:ENSRNOT00000055282
            ArrayExpress:D4ACJ8 Uniprot:D4ACJ8
        Length = 268

 Score = 150 (57.9 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|K7ELT6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000590347 Ensembl:ENST00000591055
            Uniprot:K7ELT6
        Length = 135

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 26/57 (45%), Positives = 43/57 (75%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63


>UNIPROTKB|K7ELV6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588344 Uniprot:K7ELV6
        Length = 70

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 26/57 (45%), Positives = 43/57 (75%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             K+FVGGL+++T ++++E+ F ++G+I E VV+ D+ T RS+G+GFVTF   + A  A
Sbjct:     7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63


>ZFIN|ZDB-GENE-030912-14 [details] [associations]
            symbol:hnrnpa1 "heterogeneous nuclear
            ribonucleoprotein A1" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030912-14 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 eggNOG:COG0724
            HSSP:P09651 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF CTD:3178 EMBL:BC044442 IPI:IPI00500189
            RefSeq:NP_956398.1 UniGene:Dr.67768 ProteinModelPortal:Q803K3
            SMR:Q803K3 STRING:Q803K3 PRIDE:Q803K3 GeneID:378453 KEGG:dre:378453
            InParanoid:Q803K3 NextBio:20813776 ArrayExpress:Q803K3 Bgee:Q803K3
            Uniprot:Q803K3
        Length = 422

 Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 33/85 (38%), Positives = 52/85 (61%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  +++  +FEQ+G + + VV+ D  T RS+G+GFVT+   +  + A +D
Sbjct:    34 KLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDE-VNASMD 92

Query:    84 AAP-VIDGRRANCNLACLGVQRSKP 107
             A P  +DGR      A      SKP
Sbjct:    93 ARPHKVDGRLVEPKRAVSREDSSKP 117

 Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
 Identities = 26/81 (32%), Positives = 46/81 (56%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             F  TT  K+FVGG+  +T++  +  YF+QFG+I    ++ D  TG  +G+ FVTF + ++
Sbjct:   118 FAHTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDS 177

Query:    77 AMKACVDAAPVIDGRRANCNL 97
               +  +     ++G   NC +
Sbjct:   178 VDRIVIQKYHTVNGH--NCEV 196


>UNIPROTKB|F1M2S4 [details] [associations]
            symbol:F1M2S4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00951465
            ProteinModelPortal:F1M2S4 Ensembl:ENSRNOT00000050715 Uniprot:F1M2S4
        Length = 208

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 29/69 (42%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+++T  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:     8 KLFIGGLSFKTTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 66

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    67 ARPHKVDGR 75

 Score = 122 (48.0 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 24/77 (31%), Positives = 45/77 (58%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVG    +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:    96 TVKKIFVGE---DTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 152

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   153 VIQKYHTVNGH--NCEV 167


>ZFIN|ZDB-GENE-030131-618 [details] [associations]
            symbol:hnrnpa0l "heterogeneous nuclear
            ribonucleoprotein A0, like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-618
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104255 HOGENOM:HOG000234442 EMBL:BX088707
            EMBL:BC050513 IPI:IPI00489762 UniGene:Dr.75590 UniGene:Dr.79301
            SMR:Q7ZU48 STRING:Q7ZU48 Ensembl:ENSDART00000052511
            InParanoid:Q7ZU48 OMA:ICRRIAP Uniprot:Q7ZU48
        Length = 302

 Score = 150 (57.9 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 30/59 (50%), Positives = 42/59 (71%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             K+FVGGL  + + E ++ YF QFG I +A VITDK TG+ +G+GFV F + ++A KA V
Sbjct:    98 KIFVGGLKDDIEDEHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAVV 156

 Score = 138 (53.6 bits), Expect = 6.0e-09, P = 6.0e-09
 Identities = 30/85 (35%), Positives = 48/85 (56%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL  +T  E +  +FEQ+G++ + VV+ ++   RS+ +GFVT+   E A  A + 
Sbjct:     7 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEA-DAAMS 65

Query:    84 AAP-VIDGRRANCNLACLGVQRSKP 107
             A P ++DG   +   A       KP
Sbjct:    66 ARPHIVDGNNVDLKRAVAREDAGKP 90


>UNIPROTKB|F8VXY0 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01022801 ProteinModelPortal:F8VXY0 SMR:F8VXY0 PRIDE:F8VXY0
            Ensembl:ENST00000547617 ArrayExpress:F8VXY0 Bgee:F8VXY0
            Uniprot:F8VXY0
        Length = 304

 Score = 150 (57.9 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|F8VSB5 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01022218 ProteinModelPortal:F8VSB5 SMR:F8VSB5 PRIDE:F8VSB5
            Ensembl:ENST00000552494 ArrayExpress:F8VSB5 Bgee:F8VSB5
            Uniprot:F8VSB5
        Length = 306

 Score = 150 (57.9 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|F8VRQ1 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01021093 ProteinModelPortal:F8VRQ1 SMR:F8VRQ1 PRIDE:F8VRQ1
            Ensembl:ENST00000551133 ArrayExpress:F8VRQ1 Bgee:F8VRQ1
            Uniprot:F8VRQ1
        Length = 307

 Score = 150 (57.9 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>DICTYBASE|DDB_G0279695 [details] [associations]
            symbol:DDB_G0279695 "RNA recognition motif-containing
            protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0279695 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000032 eggNOG:COG0724
            ProtClustDB:CLSZ2430003 RefSeq:XP_641604.1
            ProteinModelPortal:Q54WE9 PRIDE:Q54WE9 EnsemblProtists:DDB0233747
            GeneID:8622181 KEGG:ddi:DDB_G0279695 InParanoid:Q54WE9 OMA:HEMDGRQ
            Uniprot:Q54WE9
        Length = 84

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 29/75 (38%), Positives = 46/75 (61%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             ++FV  + W   K  ++ +F +FG + +  V+ D+ T RSKG+GFVTF   E+A  A V+
Sbjct:     4 RIFVARIPWSICKIALKTHFSKFGPVSDGYVVLDRITKRSKGFGFVTFDNAESAQNA-VN 62

Query:    84 AAPVIDGRRANCNLA 98
             +   +DGR+   NLA
Sbjct:    63 SVHEMDGRQLVVNLA 77


>UNIPROTKB|P09867 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0051028 "mRNA transport" evidence=IEA] [GO:0005681
            "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003697
            GO:GO:0030529 GO:GO:0051028 GO:GO:0071013 GO:GO:0051168
            eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
            Pfam:PF11627 EMBL:BC105413 IPI:IPI00692235 PIR:A27241
            RefSeq:NP_001039376.1 UniGene:Bt.88002 ProteinModelPortal:P09867
            SMR:P09867 STRING:P09867 PRIDE:P09867 Ensembl:ENSBTAT00000002033
            GeneID:505093 KEGG:bta:505093 CTD:3178 GeneTree:ENSGT00550000074566
            OMA:IEVEIMT BindingDB:P09867 NextBio:20866978 Uniprot:P09867
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|F8W6I7 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01021324 ProteinModelPortal:F8W6I7 SMR:F8W6I7 PRIDE:F8W6I7
            Ensembl:ENST00000330752 ArrayExpress:F8W6I7 Bgee:F8W6I7
            Uniprot:F8W6I7
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|Q06A94 [details] [associations]
            symbol:HNRNPA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
            eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
            Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 OMA:IEVEIMT
            EMBL:CU694683 EMBL:DQ972970 RefSeq:NP_001070686.1 UniGene:Ssc.49600
            SMR:Q06A94 Ensembl:ENSSSCT00000000309 GeneID:768103 KEGG:ssc:768103
            Uniprot:Q06A94
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|A5A6H4 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9598 "Pan troglodytes" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
            GeneTree:ENSGT00550000074566 OMA:IEVEIMT EMBL:AB222102
            EMBL:AL954201 RefSeq:NP_001091892.1 RefSeq:NP_001184040.1
            RefSeq:XP_003318234.1 RefSeq:XP_003954396.1 UniGene:Ptr.6288
            UniGene:Ptr.6435 ProteinModelPortal:A5A6H4 SMR:A5A6H4 PRIDE:A5A6H4
            Ensembl:ENSPTRT00000010845 GeneID:100615525 GeneID:739306
            GeneID:747284 KEGG:ptr:100615525 KEGG:ptr:739306 KEGG:ptr:747284
            CTD:739306 InParanoid:A5A6H4 BindingDB:A5A6H4 NextBio:20906554
            Uniprot:A5A6H4
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>MGI|MGI:104820 [details] [associations]
            symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
            spliceosome" evidence=IDA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
            [GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
            [GO:0051168 "nuclear export" evidence=ISO] [GO:0051170 "nuclear
            import" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:104820 GO:GO:0005737
            GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0003723 GO:GO:0003697 GO:GO:0051028 GO:GO:0051168
            eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295 GO:GO:0051170
            HOGENOM:HOG000234442 KO:K12741 OrthoDB:EOG4HQDKF InterPro:IPR021662
            Pfam:PF11627 CTD:3178 GeneTree:ENSGT00550000074566 ChiTaRS:HNRNPA1
            EMBL:M99167 EMBL:D86729 EMBL:D86728 EMBL:AK007802 EMBL:AK088308
            EMBL:AK131999 EMBL:AK135391 EMBL:AK161730 EMBL:AK166901
            EMBL:AK167161 EMBL:AK167810 EMBL:AK167913 EMBL:AK168420
            EMBL:AK168531 EMBL:BC080675 EMBL:BC083136 IPI:IPI00553777
            IPI:IPI00817004 PIR:A44485 RefSeq:NP_034577.1 UniGene:Mm.237064
            UniGene:Mm.432031 ProteinModelPortal:P49312 SMR:P49312
            IntAct:P49312 STRING:P49312 PhosphoSite:P49312 PaxDb:P49312
            PRIDE:P49312 Ensembl:ENSMUST00000087351 GeneID:15382 KEGG:mmu:15382
            UCSC:uc007xxp.1 UCSC:uc012aah.1 BindingDB:P49312 NextBio:288050
            Bgee:P49312 CleanEx:MM_HNRNPA1 Genevestigator:P49312
            GermOnline:ENSMUSG00000058922 Uniprot:P49312
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>RGD|69234 [details] [associations]
            symbol:Hnrnpa1 "heterogeneous nuclear ribonucleoprotein A1"
           species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
           evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
           spliceosome" evidence=ISO] [GO:0003697 "single-stranded DNA binding"
           evidence=ISO;ISS;TAS] [GO:0003723 "RNA binding" evidence=TAS]
           [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
           evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
           evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
           "cytoplasm" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
           evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISO]
           [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0030529
           "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0045111
           "intermediate filament cytoskeleton" evidence=ISO] [GO:0051028 "mRNA
           transport" evidence=IEA] [GO:0051168 "nuclear export"
           evidence=ISO;ISS] [GO:0051170 "nuclear import" evidence=ISO;ISS]
           [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
           InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
           SMART:SM00360 RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0008380
           GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
           GO:GO:0003723 GO:GO:0003697 GO:GO:0016070 GO:GO:0051028
           GO:GO:0051168 eggNOG:COG0724 HOVERGEN:HBG002295 GO:GO:0051170
           HOGENOM:HOG000234442 KO:K12741 InterPro:IPR021662 Pfam:PF11627
           CTD:3178 EMBL:M12156 IPI:IPI00421500 PIR:A38304 RefSeq:NP_058944.1
           UniGene:Rn.25771 ProteinModelPortal:P04256 SMR:P04256 IntAct:P04256
           STRING:P04256 PhosphoSite:P04256 PRIDE:P04256 GeneID:29578
           KEGG:rno:29578 UCSC:RGD:69234 NextBio:609678 ArrayExpress:P04256
           Genevestigator:P04256 GermOnline:ENSRNOG00000036839 Uniprot:P04256
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|Q5I0M7 [details] [associations]
            symbol:Hnrnpa1 "Hnrpa1 protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69234 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH474035 eggNOG:COG0724 HOVERGEN:HBG002295 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00550000074566 IPI:IPI00421500
            UniGene:Rn.25771 EMBL:BC088150 SMR:Q5I0M7 STRING:Q5I0M7
            Ensembl:ENSRNOT00000055285 Genevestigator:Q5I0M7 Uniprot:Q5I0M7
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|Q28521 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9544 "Macaca mulatta" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003723 GO:GO:0030529 GO:GO:0051028
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF InterPro:IPR021662 Pfam:PF11627 CTD:3178
            EMBL:M84334 PIR:S30192 RefSeq:NP_001036248.1 UniGene:Mmu.4980
            ProteinModelPortal:Q28521 SMR:Q28521 STRING:Q28521 PRIDE:Q28521
            GeneID:702977 KEGG:mcc:702977 InParanoid:Q28521 NextBio:19966247
            Uniprot:Q28521
        Length = 320

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEK-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 139 (54.0 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 25/77 (32%), Positives = 46/77 (59%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF +  +  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|B1AKP7 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109811
            HOGENOM:HOG000254792 HOVERGEN:HBG058671 UniGene:Hs.300624
            HGNC:HGNC:11571 ChiTaRS:TARDBP IPI:IPI00639819 SMR:B1AKP7
            Ensembl:ENST00000315091 Uniprot:B1AKP7
        Length = 295

 Score = 149 (57.5 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ +++YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>UNIPROTKB|I3L7S7 [details] [associations]
            symbol:LOC100621383 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00570000079202 Ensembl:ENSSSCT00000025708
            Uniprot:I3L7S7
        Length = 275

 Score = 148 (57.2 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ +++YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:    39 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKV-MSQ 97

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:    98 RHMIDGRWCDCKL 110


>SGD|S000005483 [details] [associations]
            symbol:HRP1 "Subunit of cleavage factor I" species:4932
            "Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA]
            [GO:0005849 "mRNA cleavage factor complex" evidence=IPI]
            [GO:0006379 "mRNA cleavage" evidence=IDA] [GO:0003729 "mRNA
            binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 SGD:S000005483
            EMBL:BK006948 GO:GO:0000184 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0010494 eggNOG:COG0724
            GO:GO:0006379 GO:GO:0005849 KO:K14411 GeneTree:ENSGT00700000104255
            EMBL:U35737 EMBL:U38535 EMBL:X95258 EMBL:Z74865 PIR:S66820
            RefSeq:NP_014518.1 PDB:2CJK PDB:2KM8 PDBsum:2CJK PDBsum:2KM8
            ProteinModelPortal:Q99383 SMR:Q99383 DIP:DIP-1371N IntAct:Q99383
            MINT:MINT-395353 STRING:Q99383 PaxDb:Q99383 PeptideAtlas:Q99383
            EnsemblFungi:YOL123W GeneID:853997 KEGG:sce:YOL123W CYGD:YOL123w
            HOGENOM:HOG000248803 OMA:AREEQDK OrthoDB:EOG4TF3VC
            EvolutionaryTrace:Q99383 NextBio:975491 Genevestigator:Q99383
            GermOnline:YOL123W Uniprot:Q99383
        Length = 534

 Score = 154 (59.3 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 24/68 (35%), Positives = 48/68 (70%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL W+T ++ + +YF ++G + +  ++ D ATGRS+G+GF++F +P +++   V 
Sbjct:   160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKP-SSVDEVVK 218

Query:    84 AAPVIDGR 91
                ++DG+
Sbjct:   219 TQHILDGK 226

 Score = 138 (53.6 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 23/58 (39%), Positives = 41/58 (70%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             K+FVGG+  + + +  E++F Q+G I++A ++ DK TG+S+G+GFVT+   +A  + C
Sbjct:   244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVC 301


>UNIPROTKB|G3V162 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 EMBL:CH471130 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AL109811 UniGene:Hs.300624 HGNC:HGNC:11571 ChiTaRS:TARDBP
            ProteinModelPortal:G3V162 SMR:G3V162 PRIDE:G3V162
            Ensembl:ENST00000473869 ArrayExpress:G3V162 Bgee:G3V162
            Uniprot:G3V162
        Length = 298

 Score = 149 (57.5 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ +++YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>UNIPROTKB|F8W1S7 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111
            "intermediate filament cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0045111 InterPro:IPR021662
            Pfam:PF11627 EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1
            IPI:IPI01021812 ProteinModelPortal:F8W1S7 SMR:F8W1S7 PRIDE:F8W1S7
            Ensembl:ENST00000552591 ArrayExpress:F8W1S7 Bgee:F8W1S7
            Uniprot:F8W1S7
        Length = 330

 Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 3.5e-09, P = 3.5e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|D4A491 [details] [associations]
            symbol:D4A491 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OrthoDB:EOG4HQDKF
            IPI:IPI00560785 ProteinModelPortal:D4A491
            Ensembl:ENSRNOT00000046349 OMA:DNAMEAR Uniprot:D4A491
        Length = 239

 Score = 145 (56.1 bits), Expect = 4.0e-10, P = 4.0e-10
 Identities = 29/69 (42%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:     8 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 66

Query:    84 AAP-VIDGR 91
             A P  ++GR
Sbjct:    67 ARPHKVNGR 75

 Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 25/79 (31%), Positives = 48/79 (60%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFG--EILEAVVITDKATGRSKGYGFVTFREPEAAM 78
             T  K+FVGG+  +T++  +  YF Q+G  E++E  ++TD+ +G+ +G+ FVTF + ++  
Sbjct:    96 TVKKIFVGGIKEDTEEHHLRDYFGQYGKTEVIE--IVTDRGSGKKRGFAFVTFDDRDSVD 153

Query:    79 KACVDAAPVIDGRRANCNL 97
             K  +     ++G   NC +
Sbjct:   154 KIVIQKYHTVNGH--NCEV 170


>UNIPROTKB|E9PSF1 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955 HGNC:HGNC:15818
            IPI:IPI00974044 ProteinModelPortal:E9PSF1 SMR:E9PSF1
            Ensembl:ENST00000342690 ArrayExpress:E9PSF1 Bgee:E9PSF1
            Uniprot:E9PSF1
        Length = 77

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:    19 DTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATG 61
             DTT+TK+FVGGL + T   ++ KYFE FG+I EAVVITD+ TG
Sbjct:    30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTG 72


>TAIR|locus:2077427 [details] [associations]
            symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
            EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
            ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
            GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
            OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
            Genevestigator:Q9SFB4 Uniprot:Q9SFB4
        Length = 143

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 28/69 (40%), Positives = 45/69 (65%)

Query:    23 TKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACV 82
             +K+F+GGL+W   +++++  F  FGE+ E  +  DK +GRS+G+GFV F E   A+ A  
Sbjct:    41 SKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSA-K 99

Query:    83 DAAPVIDGR 91
             DA   +DG+
Sbjct:   100 DA---MDGK 105


>TAIR|locus:2037633 [details] [associations]
            symbol:RBP1 "RNA-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
            GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
            EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
            IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
            ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
            PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
            KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
            PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
            Uniprot:Q9C652
        Length = 360

 Score = 150 (57.9 bits), Expect = 4.4e-10, P = 4.4e-10
 Identities = 28/60 (46%), Positives = 42/60 (70%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG+A ET +E +++YF ++G +LEAVV  +K TG+ +G+GFV F      +KA  D
Sbjct:     7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66

 Score = 131 (51.2 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 26/55 (47%), Positives = 37/55 (67%)

Query:    18 GDTTYTK-VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTF 71
             G T+ TK +FVGGL+  T +E  + YFE+FG   + VV+ D  T R +G+GFVT+
Sbjct:   114 GVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTY 168


>UNIPROTKB|P09651 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
            [GO:0051028 "mRNA transport" evidence=IEA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC;TAS] [GO:0003723 "RNA binding" evidence=TAS]
            [GO:0006397 "mRNA processing" evidence=TAS] [GO:0003727
            "single-stranded RNA binding" evidence=IC] [GO:0005654
            "nucleoplasm" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006405 "RNA export from nucleus" evidence=IC]
            [GO:0051170 "nuclear import" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0051168 "nuclear
            export" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
            filament cytoskeleton" evidence=IDA] Reactome:REACT_71
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0019048 GO:GO:0005654
            GO:GO:0005730 GO:GO:0000166 Reactome:REACT_1675 GO:GO:0003727
            Gene3D:3.30.70.330 EMBL:CH471054 GO:GO:0045111 GO:GO:0003697
            Pathway_Interaction_DB:ar_pathway GO:GO:0051028 GO:GO:0000398
            GO:GO:0071013 eggNOG:COG0724 GO:GO:0000380 HOVERGEN:HBG002295
            GO:GO:0051170 GO:GO:0006405 HOGENOM:HOG000234442 KO:K12741
            OrthoDB:EOG4HQDKF CTD:3178 OMA:IEVEIMT EMBL:X12671 EMBL:X06747
            EMBL:X79536 EMBL:AK291113 EMBL:AC078778 EMBL:BC002355 EMBL:BC009600
            EMBL:BC012158 EMBL:BC033714 EMBL:BC052296 EMBL:BC070315
            EMBL:BC074502 EMBL:BC103707 EMBL:X04347 IPI:IPI00215965
            IPI:IPI00465365 IPI:IPI00797148 PIR:S02061 PIR:S12520
            RefSeq:NP_002127.1 RefSeq:NP_112420.1 UniGene:Hs.546261
            UniGene:Hs.655424 PDB:1HA1 PDB:1L3K PDB:1PGZ PDB:1PO6 PDB:1U1K
            PDB:1U1L PDB:1U1M PDB:1U1N PDB:1U1O PDB:1U1P PDB:1U1Q PDB:1U1R
            PDB:1UP1 PDB:2H4M PDB:2LYV PDB:2UP1 PDBsum:1HA1 PDBsum:1L3K
            PDBsum:1PGZ PDBsum:1PO6 PDBsum:1U1K PDBsum:1U1L PDBsum:1U1M
            PDBsum:1U1N PDBsum:1U1O PDBsum:1U1P PDBsum:1U1Q PDBsum:1U1R
            PDBsum:1UP1 PDBsum:2H4M PDBsum:2LYV PDBsum:2UP1 DisProt:DP00324
            ProteinModelPortal:P09651 SMR:P09651 DIP:DIP-29338N IntAct:P09651
            MINT:MINT-1035550 STRING:P09651 PhosphoSite:P09651 DMDM:288558857
            SWISS-2DPAGE:P09651 PaxDb:P09651 PRIDE:P09651
            Ensembl:ENST00000340913 Ensembl:ENST00000546500
            Ensembl:ENST00000547276 Ensembl:ENST00000547566 GeneID:3178
            KEGG:hsa:3178 UCSC:uc001sfl.3 UCSC:uc001sfm.3 UCSC:uc001sfn.3
            GeneCards:GC12P054674 H-InvDB:HIX0032087 H-InvDB:HIX0040127
            H-InvDB:HIX0202582 HGNC:HGNC:5031 HPA:CAB010894 HPA:HPA001666
            MIM:164017 neXtProt:NX_P09651 PharmGKB:PA162391113
            InParanoid:P09651 PhylomeDB:P09651 BindingDB:P09651
            ChEMBL:CHEMBL1955709 ChiTaRS:HNRNPA1 EvolutionaryTrace:P09651
            GenomeRNAi:3178 NextBio:12614 ArrayExpress:P09651 Bgee:P09651
            CleanEx:HS_HNRNPA1 Genevestigator:P09651 GermOnline:ENSG00000135486
            Uniprot:P09651
        Length = 372

 Score = 150 (57.9 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|E2QYP1 [details] [associations]
            symbol:HNRNPA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
            ProteinModelPortal:E2QYP1 PRIDE:E2QYP1 Ensembl:ENSCAFT00000010628
            NextBio:20853043 Uniprot:E2QYP1
        Length = 373

 Score = 150 (57.9 bits), Expect = 4.8e-10, P = 4.8e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|D4ACJ7 [details] [associations]
            symbol:Hnrnpa1 "RCG50547, isoform CRA_b" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69234 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013 GO:GO:0051168
            EMBL:CH474035 GO:GO:0000380 GO:GO:0051170 OrthoDB:EOG4HQDKF
            OMA:IEVEIMT IPI:IPI00781944 SMR:D4ACJ7 Ensembl:ENSRNOT00000055284
            Uniprot:D4ACJ7
        Length = 373

 Score = 150 (57.9 bits), Expect = 4.8e-10, P = 4.8e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    74 ARPHKVDGR 82

 Score = 141 (54.7 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   163 VIQKYHTVNGH--NCEV 177


>UNIPROTKB|F1NDD0 [details] [associations]
            symbol:F1NDD0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007126 "meiosis"
            evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=IEA] [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:AADN02019816 EMBL:AADN02019817 IPI:IPI00575003
            ProteinModelPortal:F1NDD0 Ensembl:ENSGALT00000013174 Uniprot:F1NDD0
        Length = 307

 Score = 148 (57.2 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 28/68 (41%), Positives = 43/68 (63%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             FG  T  ++FVGG+ ++T +  + K+F Q+G + E  ++ D+A G SKGYGF+TF   E 
Sbjct:    33 FGTVTPNRIFVGGIDFKTNENDLRKFFAQYGCVREVKIVNDRA-GISKGYGFITFETQED 91

Query:    77 AMKACVDA 84
             A K   +A
Sbjct:    92 AQKILQEA 99


>RGD|1310906 [details] [associations]
            symbol:Tardbp "TAR DNA binding protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IEA;ISO]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing"
            evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IDA]
            [GO:0034976 "response to endoplasmic reticulum stress"
            evidence=IEP] [GO:0035061 "interchromatin granule" evidence=IDA]
            [GO:0043922 "negative regulation by host of viral transcription"
            evidence=IEA;ISO] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1310906 GO:GO:0005737 GO:GO:0000166 GO:GO:0016607
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0034976 EMBL:CH473968
            GO:GO:0005726 GO:GO:0035061 CTD:23435 GeneTree:ENSGT00570000079202
            EMBL:BC083752 RefSeq:NP_001011979.1 UniGene:Rn.2633
            Ensembl:ENSRNOT00000049822 GeneID:298648 KEGG:rno:298648
            Uniprot:I6L9G6
        Length = 285

 Score = 147 (56.8 bits), Expect = 5.0e-10, P = 5.0e-10
 Identities = 31/73 (42%), Positives = 43/73 (58%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ ++ YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>UNIPROTKB|F1Q3G7 [details] [associations]
            symbol:HNRNPA1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003697 GO:GO:0071013
            GO:GO:0051168 GO:GO:0000380 GO:GO:0051170
            GeneTree:ENSGT00550000074566 EMBL:AAEX03014967
            Ensembl:ENSCAFT00000010627 OMA:QAQQGGW Uniprot:F1Q3G7
        Length = 384

 Score = 150 (57.9 bits), Expect = 5.1e-10, P = 5.1e-10
 Identities = 30/69 (43%), Positives = 48/69 (69%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    36 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 94

Query:    84 AAP-VIDGR 91
             A P  +DGR
Sbjct:    95 ARPHKVDGR 103

 Score = 141 (54.7 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   124 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 183

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   184 VIQKYHTVNGH--NCEV 198


>UNIPROTKB|D4A9S4 [details] [associations]
            symbol:Tardbp "Protein Tardbp" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1310906 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00197538 ProteinModelPortal:D4A9S4
            Ensembl:ENSRNOT00000017922 ArrayExpress:D4A9S4 Uniprot:D4A9S4
        Length = 288

 Score = 147 (56.8 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 31/73 (42%), Positives = 43/73 (58%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ ++ YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>ZFIN|ZDB-GENE-030131-6154 [details] [associations]
            symbol:hnrnpa0b "heterogeneous nuclear
            ribonucleoprotein A0b" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-6154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442 KO:K12894
            EMBL:BC066434 IPI:IPI00507638 RefSeq:NP_999871.1 UniGene:Dr.35374
            ProteinModelPortal:Q6NYW8 SMR:Q6NYW8 STRING:Q6NYW8 PRIDE:Q6NYW8
            GeneID:334222 KEGG:dre:334222 CTD:334222 InParanoid:Q6NYW8
            OrthoDB:EOG4M65KN NextBio:20810313 ArrayExpress:Q6NYW8 Bgee:Q6NYW8
            Uniprot:Q6NYW8
        Length = 314

 Score = 148 (57.2 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 30/75 (40%), Positives = 49/75 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL  + +++ + ++F QFG I ++ VITDK TG+ +G+GFV F + ++A KA V 
Sbjct:   100 KIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVL 159

Query:    84 AAPVIDGRRANCNLA 98
                +I+G +     A
Sbjct:   160 KFHMINGHKVEVKKA 174

 Score = 137 (53.3 bits), Expect = 8.6e-09, P = 8.6e-09
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGGL  +T  + +  YFEQFG + + VV+ +    RS+ +GFVT+   E A  A + 
Sbjct:     9 KLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEA-DAAMA 67

Query:    84 AAP-VIDGRRANCNLACLGVQRSKP 107
             A P V+DG+      A       +P
Sbjct:    68 ARPHVVDGKNVEVKRAVAREDAGRP 92


>UNIPROTKB|F1N3T3 [details] [associations]
            symbol:F1N3T3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:DAAA02019525 IPI:IPI00709098
            Ensembl:ENSBTAT00000014774 OMA:FGGYPCY Uniprot:F1N3T3
        Length = 352

 Score = 149 (57.5 bits), Expect = 5.4e-10, P = 5.4e-10
 Identities = 31/69 (44%), Positives = 49/69 (71%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL+ ET +E+++ Y++Q+GE+ + VVI   A+ +S+G+GFVTF    A + A + 
Sbjct:    22 KLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSV-AEVDAAMA 80

Query:    84 AAP-VIDGR 91
             A P  IDGR
Sbjct:    81 ARPHSIDGR 89

 Score = 144 (55.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/83 (36%), Positives = 50/83 (60%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FVGG+  +T++  + +YFE++G+I    +ITD+ +G+ +G+GFVTF + +   K  + 
Sbjct:   113 KLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQ 172

Query:    84 AAPVIDGRRANCNLACLGVQRSK 106
                 I+G RA    A L  Q  K
Sbjct:   173 KYHAINGHRAEVGKA-LSRQEMK 194


>UNIPROTKB|F1SCL3 [details] [associations]
            symbol:LOC100522980 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
            RefSeq:XP_003123190.1 Ensembl:ENSSSCT00000014811 GeneID:100522980
            KEGG:ssc:100522980 Uniprot:F1SCL3
        Length = 354

 Score = 149 (57.5 bits), Expect = 5.5e-10, P = 5.5e-10
 Identities = 30/71 (42%), Positives = 49/71 (69%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL  ET++E++  Y++Q+G++ + VVI D ++ RS+G+GFV F    A + A 
Sbjct:    20 FRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSV-AEVDAA 78

Query:    82 VDAAP-VIDGR 91
             + A P  IDGR
Sbjct:    79 MAARPHSIDGR 89

 Score = 111 (44.1 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T +  +  YFE++G I +A+ I  + +GR   +GFVTF + +   K 
Sbjct:   110 TTKKLFVGGIKEDTTERHLRDYFERYGTI-DAIEII-RQSGRKTAFGFVTFDDHDPVDKI 167

Query:    81 CVDAAPVIDGRRANCN--LACLGVQRSKPS 108
              +     I+G  A     L+  G+Q  + S
Sbjct:   168 VLQKYHTINGHHAQLEKALSRQGMQEVQSS 197


>UNIPROTKB|F1SCM6 [details] [associations]
            symbol:LOC100522063 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:CU986279
            RefSeq:XP_003123185.1 Ensembl:ENSSSCT00000014807 GeneID:100522063
            KEGG:ssc:100522063 Uniprot:F1SCM6
        Length = 354

 Score = 149 (57.5 bits), Expect = 5.5e-10, P = 5.5e-10
 Identities = 30/71 (42%), Positives = 49/71 (69%)

Query:    22 YTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKAC 81
             + K+F+GGL  ET++E++  Y++Q+G++ + VVI D ++ RS+G+GFV F    A + A 
Sbjct:    20 FRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSV-AEVDAA 78

Query:    82 VDAAP-VIDGR 91
             + A P  IDGR
Sbjct:    79 MAARPHSIDGR 89

 Score = 111 (44.1 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 29/90 (32%), Positives = 48/90 (53%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T +  +  YFE++G I +A+ I  + +GR   +GFVTF + +   K 
Sbjct:   110 TTKKLFVGGIKEDTTERHLRDYFERYGTI-DAIEII-RQSGRKTAFGFVTFDDHDPVDKI 167

Query:    81 CVDAAPVIDGRRANCN--LACLGVQRSKPS 108
              +     I+G  A     L+  G+Q  + S
Sbjct:   168 VLQKYHTINGHHAQLEKALSRQGMQEVQSS 197


>ZFIN|ZDB-GENE-060224-1 [details] [associations]
            symbol:hnrnpa3 "heterogeneous nuclear
            ribonucleoprotein A3" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-060224-1 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104376 EMBL:CR848724 IPI:IPI00863016
            UniGene:Dr.85855 SMR:B0V1I7 Ensembl:ENSDART00000135273 OMA:IETIDIM
            Uniprot:B0V1I7
        Length = 312

 Score = 147 (56.8 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET ++++  +FEQ+G++ + VV+ D A  RS+G+GFVT+    + + A + 
Sbjct:    14 KLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSV-SEVDAAMT 72

Query:    84 AAP-VIDGRRANCNLACLGVQRSKP 107
             A P  +DGR      A      +KP
Sbjct:    73 ARPHKVDGRVVEPKRAVSREDSNKP 97

 Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 23/77 (29%), Positives = 44/77 (57%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  + +YFE +G+I    ++ +++TG+ +G+ FVTF + +   K 
Sbjct:   102 TVKKIFVGGIKEDTEEYHIREYFECYGKIETIDIMEERSTGKKRGFCFVTFDDHDTVDKI 161

Query:    81 CVDAAPVIDGRRANCNL 97
                    I+    NC +
Sbjct:   162 VAQKYHTINSH--NCEV 176


>DICTYBASE|DDB_G0287335 [details] [associations]
            symbol:DDB_G0287335 "RNA-binding region RNP-1
            domain-containing protein" species:44689 "Dictyostelium discoideum"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0287335 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000100 RefSeq:XP_637244.1
            ProteinModelPortal:Q54KH9 PRIDE:Q54KH9 EnsemblProtists:DDB0233757
            GeneID:8626075 KEGG:ddi:DDB_G0287335 eggNOG:NOG271892
            InParanoid:Q54KH9 OMA:MEAENEM ProtClustDB:CLSZ2430003
            Uniprot:Q54KH9
        Length = 91

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 26/69 (37%), Positives = 45/69 (65%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+FV  L W   +E ++++F ++G I  + V+ DK T RS+G+GFVTF + ++  KA ++
Sbjct:     4 KIFVSQLPWSVCREALKQHFSKYGSINHSYVVVDKVTKRSRGFGFVTFDQSDSVQKA-ME 62

Query:    84 AAPVIDGRR 92
             A   + GR+
Sbjct:    63 AENEMGGRK 71


>WB|WBGene00001999 [details] [associations]
            symbol:hrp-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040015 "negative regulation of
            multicellular organism growth" evidence=IMP] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0000781 "chromosome, telomeric region" evidence=IDA]
            [GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0048477 GO:GO:0003723 GO:GO:0040035 GO:GO:0030529
            GO:GO:0040015 GO:GO:0000398 GO:GO:0000781 eggNOG:COG0724
            GO:GO:0031581 GeneTree:ENSGT00700000104255 KO:K12741 EMBL:D10877
            EMBL:FO081370 PIR:S35500 RefSeq:NP_001023199.1
            RefSeq:NP_001040944.1 RefSeq:NP_001040945.1 RefSeq:NP_500326.2
            UniGene:Cel.7537 ProteinModelPortal:Q22037 SMR:Q22037 IntAct:Q22037
            STRING:Q22037 PaxDb:Q22037 PRIDE:Q22037 EnsemblMetazoa:F42A6.7a.1
            EnsemblMetazoa:F42A6.7a.2 GeneID:177101 KEGG:cel:CELE_F42A6.7
            UCSC:F42A6.7a.1 CTD:177101 WormBase:F42A6.7a WormBase:F42A6.7b
            WormBase:F42A6.7c WormBase:F42A6.7d InParanoid:Q22037 OMA:YGGGWGQ
            NextBio:895332 Uniprot:Q22037
        Length = 346

 Score = 148 (57.2 bits), Expect = 6.7e-10, P = 6.7e-10
 Identities = 32/71 (45%), Positives = 45/71 (63%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFR---EPEAAMKA 80
             K+FVGGL   T  + M +++ QFGEI + +V+ D  T RS+G+GFVTF    E +AAMK 
Sbjct:    24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK- 82

Query:    81 CVDAAPVIDGR 91
                   +IDG+
Sbjct:    83 --QRPHIIDGK 91

 Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 18/71 (25%), Positives = 46/71 (64%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             +++V G+  +  ++ + +YF ++G + ++ +I DKAT + +G+GFVTF + ++  +  + 
Sbjct:   115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174

Query:    84 AAPVIDGRRAN 94
              + +++G R +
Sbjct:   175 KSHMVNGHRCD 185


>UNIPROTKB|Q32P51 [details] [associations]
            symbol:HNRNPA1L2 "Heterogeneous nuclear ribonucleoprotein
            A1-like 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0000380 "alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
            GO:GO:0003723 GO:GO:0051028 eggNOG:COG0724 HSSP:Q61474
            EMBL:CH471124 EMBL:AK123159 EMBL:AL137058 EMBL:BC108266
            IPI:IPI00879501 RefSeq:NP_001011724.1 RefSeq:NP_001011725.1
            UniGene:Hs.447506 ProteinModelPortal:Q32P51 SMR:Q32P51
            IntAct:Q32P51 STRING:Q32P51 PhosphoSite:Q32P51 DMDM:190356061
            PaxDb:Q32P51 PRIDE:Q32P51 Ensembl:ENST00000342657
            Ensembl:ENST00000357495 Ensembl:ENST00000398039 GeneID:144983
            KEGG:hsa:144983 UCSC:uc001vgx.1 CTD:144983 GeneCards:GC13P053192
            HGNC:HGNC:27067 neXtProt:NX_Q32P51 PharmGKB:PA164720701
            HOGENOM:HOG000234442 InParanoid:Q32P51 KO:K12741 OMA:HYGSIVD
            OrthoDB:EOG4HQDKF GenomeRNAi:144983 NextBio:85023 Bgee:Q32P51
            Genevestigator:Q32P51 InterPro:IPR021662 Pfam:PF11627
            Uniprot:Q32P51
        Length = 320

 Score = 147 (56.8 bits), Expect = 7.0e-10, P = 7.0e-10
 Identities = 29/69 (42%), Positives = 47/69 (68%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             K+F+GGL++ET  E++  +FEQ+G + + VV+ D  T RS+G+GFVT+   E  + A ++
Sbjct:    15 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEE-VDAAMN 73

Query:    84 AAP-VIDGR 91
               P  +DGR
Sbjct:    74 TTPHKVDGR 82

 Score = 139 (54.0 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 25/77 (32%), Positives = 46/77 (59%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:   103 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162

Query:    81 CVDAAPVIDGRRANCNL 97
              +     + G   NC +
Sbjct:   163 VIQKYHTVKGH--NCEV 177


>UNIPROTKB|G3MY63 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00530000063480 EMBL:DAAA02005516 EMBL:DAAA02005517
            EMBL:DAAA02005518 Ensembl:ENSBTAT00000065390 Uniprot:G3MY63
        Length = 271

 Score = 145 (56.1 bits), Expect = 7.1e-10, P = 7.1e-10
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             +G     ++FVGG+ ++T +  + K+F Q+G + E  ++ D+A G SKGYGFVTF   E 
Sbjct:    39 YGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQED 97

Query:    77 AMKACVDA 84
             A K   +A
Sbjct:    98 AQKILQEA 105


>UNIPROTKB|Q2KJ45 [details] [associations]
            symbol:TARDBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG145464
            HOGENOM:HOG000254792 HOVERGEN:HBG058671 OrthoDB:EOG447FTT
            GeneTree:ENSGT00570000079202 EMBL:DAAA02042967 EMBL:DAAA02042968
            UniGene:Bt.106561 EMBL:BC105527 IPI:IPI00695185 SMR:Q2KJ45
            STRING:Q2KJ45 Ensembl:ENSBTAT00000033464 InParanoid:Q2KJ45
            Uniprot:Q2KJ45
        Length = 298

 Score = 146 (56.5 bits), Expect = 7.5e-10, P = 7.5e-10
 Identities = 31/73 (42%), Positives = 43/73 (58%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ ++ YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>UNIPROTKB|Q13148 [details] [associations]
            symbol:TARDBP "TAR DNA-binding protein 43" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008219 "cell
            death" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA] [GO:0043922
            "negative regulation by host of viral transcription" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            GO:GO:0008219 EMBL:CH471130 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003700 GO:GO:0006366 GO:GO:0003730 GO:GO:0003690
            Orphanet:803 eggNOG:COG0724 GO:GO:0043922 Orphanet:275872
            GO:GO:0070935 EMBL:AL109811 CTD:23435 HOVERGEN:HBG058671
            OrthoDB:EOG447FTT EMBL:U23731 EMBL:EF434181 EMBL:EF434182
            EMBL:EF434183 EMBL:AK312416 EMBL:CR533534 EMBL:AK222754
            EMBL:AL050265 EMBL:BC071657 EMBL:BC095435 IPI:IPI00025815
            IPI:IPI00844544 IPI:IPI00971018 PIR:I38977 RefSeq:NP_031401.1
            UniGene:Hs.300624 PDB:1WF0 PDB:2CQG PDBsum:1WF0 PDBsum:2CQG
            ProteinModelPortal:Q13148 SMR:Q13148 DIP:DIP-31167N IntAct:Q13148
            STRING:Q13148 PhosphoSite:Q13148 DMDM:20140568 PaxDb:Q13148
            PRIDE:Q13148 DNASU:23435 Ensembl:ENST00000240185 GeneID:23435
            KEGG:hsa:23435 UCSC:uc001art.3 GeneCards:GC01P011006
            HGNC:HGNC:11571 HPA:CAB003703 HPA:HPA017284 MIM:605078 MIM:612069
            neXtProt:NX_Q13148 PharmGKB:PA36336 InParanoid:Q13148 OMA:QFFSQYG
            PhylomeDB:Q13148 ChiTaRS:TARDBP EvolutionaryTrace:Q13148
            GenomeRNAi:23435 NextBio:45695 ArrayExpress:Q13148 Bgee:Q13148
            CleanEx:HS_TARDBP Genevestigator:Q13148 GermOnline:ENSG00000120948
            Uniprot:Q13148
        Length = 414

 Score = 149 (57.5 bits), Expect = 7.6e-10, P = 7.6e-10
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query:    25 VFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVDA 84
             + V GL W+T ++ +++YF  FGE+L   V  D  TG SKG+GFV F E E  +K  +  
Sbjct:   106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKV-MSQ 164

Query:    85 APVIDGRRANCNL 97
               +IDGR  +C L
Sbjct:   165 RHMIDGRWCDCKL 177


>UNIPROTKB|Q8N9W6 [details] [associations]
            symbol:BOLL "Protein boule-like" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008494
            "translation activator activity" evidence=IDA] [GO:0045948
            "positive regulation of translational initiation" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007126 "meiosis"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0007126
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 EMBL:CH471063
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0008494
            EMBL:AF272858 EMBL:AM295005 EMBL:AK058099 EMBL:AK093453
            EMBL:AK097795 EMBL:AC011997 EMBL:BC033674 IPI:IPI00056506
            IPI:IPI00377133 IPI:IPI00396276 IPI:IPI00871244 RefSeq:NP_149019.1
            RefSeq:NP_932074.1 UniGene:Hs.169797 ProteinModelPortal:Q8N9W6
            SMR:Q8N9W6 IntAct:Q8N9W6 STRING:Q8N9W6 PhosphoSite:Q8N9W6
            DMDM:44887719 PRIDE:Q8N9W6 DNASU:66037 Ensembl:ENST00000321801
            Ensembl:ENST00000392296 Ensembl:ENST00000433157 GeneID:66037
            KEGG:hsa:66037 UCSC:uc002uur.2 UCSC:uc002uus.2 UCSC:uc002uut.2
            UCSC:uc002uuu.1 CTD:66037 GeneCards:GC02M198591 H-InvDB:HIX0030239
            HGNC:HGNC:14273 HPA:HPA018678 MIM:606165 neXtProt:NX_Q8N9W6
            PharmGKB:PA25397 eggNOG:NOG260394 HOGENOM:HOG000095250
            HOVERGEN:HBG048761 OrthoDB:EOG4MPHQQ GenomeRNAi:66037 NextBio:67546
            ArrayExpress:Q8N9W6 Bgee:Q8N9W6 CleanEx:HS_BOLL
            Genevestigator:Q8N9W6 GermOnline:ENSG00000152430 GO:GO:0045948
            Uniprot:Q8N9W6
        Length = 283

 Score = 145 (56.1 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             +G     ++FVGG+ ++T +  + K+F Q+G + E  ++ D+A G SKGYGFVTF   E 
Sbjct:    27 YGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQED 85

Query:    77 AMKACVDA 84
             A K   +A
Sbjct:    86 AQKILQEA 93


>FB|FBgn0064117 [details] [associations]
            symbol:CG33714 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330
            GeneTree:ENSGT00390000008624 RefSeq:NP_001027083.1
            RefSeq:NP_001027084.1 UniGene:Dm.234 SMR:Q0KHQ1 STRING:Q0KHQ1
            EnsemblMetazoa:FBtr0091703 EnsemblMetazoa:FBtr0091704
            GeneID:3772560 KEGG:dme:Dmel_CG33714 UCSC:CG33714-RA
            FlyBase:FBgn0064117 InParanoid:Q0KHQ1 OMA:GHRELRN OrthoDB:EOG4X0K91
            NextBio:854180 Uniprot:Q0KHQ1
        Length = 90

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 28/71 (39%), Positives = 40/71 (56%)

Query:    24 KVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKACVD 83
             ++FVG L W    + +  YF +FG ++ A VI DK TG SKGYGFV+F    A  K   +
Sbjct:    16 RIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLTALEKIENE 75

Query:    84 AAPVIDGRRAN 94
                +++G   N
Sbjct:    76 QKHILEGNYLN 86


>UNIPROTKB|F8VTQ5 [details] [associations]
            symbol:HNRNPA1 "Heterogeneous nuclear ribonucleoprotein A1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC078778 HGNC:HGNC:5031 ChiTaRS:HNRNPA1 IPI:IPI01022641
            ProteinModelPortal:F8VTQ5 SMR:F8VTQ5 PRIDE:F8VTQ5
            Ensembl:ENST00000551702 ArrayExpress:F8VTQ5 Bgee:F8VTQ5
            Uniprot:F8VTQ5
        Length = 145

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 25/77 (32%), Positives = 47/77 (61%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  K+FVGG+  +T++  +  YFEQ+G+I    ++TD+ +G+ +G+ FVTF + ++  K 
Sbjct:    54 TVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 113

Query:    81 CVDAAPVIDGRRANCNL 97
              +     ++G   NC +
Sbjct:   114 VIQKYHTVNGH--NCEV 128


>TAIR|locus:2049816 [details] [associations]
            symbol:AT2G37510 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:AC005896 GO:GO:0003676 HOGENOM:HOG000276232
            HSSP:P11940 EMBL:AY084740 EMBL:BT028941 IPI:IPI00545899 PIR:F84793
            RefSeq:NP_181287.1 UniGene:At.37414 ProteinModelPortal:Q8S8L4
            SMR:Q8S8L4 PRIDE:Q8S8L4 EnsemblPlants:AT2G37510.1 GeneID:818327
            KEGG:ath:AT2G37510 TAIR:At2g37510 eggNOG:NOG305672
            InParanoid:Q8S8L4 OMA:NKTIGWC PhylomeDB:Q8S8L4
            ProtClustDB:CLSN2683075 ArrayExpress:Q8S8L4 Genevestigator:Q8S8L4
            Uniprot:Q8S8L4
        Length = 142

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 31/71 (43%), Positives = 46/71 (64%)

Query:    21 TYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEAAMKA 80
             T  ++FV GL+  T  E ++  F  FG++++A VITD+ +GRSKG+GFVT+   E A KA
Sbjct:    32 TSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKA 91

Query:    81 CVDA-APVIDG 90
               +  A  +DG
Sbjct:    92 KAEMNAKFLDG 102


>UNIPROTKB|C1JGV6 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:DAAA02005516 EMBL:DAAA02005517 EMBL:DAAA02005518 EMBL:FJ623266
            IPI:IPI00867153 UniGene:Bt.25777 Ensembl:ENSBTAT00000044801
            Uniprot:C1JGV6
        Length = 295

 Score = 145 (56.1 bits), Expect = 9.3e-10, P = 9.3e-10
 Identities = 27/68 (39%), Positives = 42/68 (61%)

Query:    17 FGDTTYTKVFVGGLAWETQKETMEKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPEA 76
             +G     ++FVGG+ ++T +  + K+F Q+G + E  ++ D+A G SKGYGFVTF   E 
Sbjct:    39 YGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQED 97

Query:    77 AMKACVDA 84
             A K   +A
Sbjct:    98 AQKILQEA 105

WARNING:  HSPs involving 769 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.131   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      189       139   0.00091  102 3  11 22  0.40    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1019
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  131 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.17u 0.09s 11.26t   Elapsed:  00:00:00
  Total cpu time:  11.19u 0.09s 11.28t   Elapsed:  00:00:00
  Start:  Mon May 20 23:49:37 2013   End:  Mon May 20 23:49:37 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT1G22910 AT1G22910 AT1G22910	protein from Arabidopsis thaliana	8.4e-42
BLAST match view associations BLAST with AT1G33470 AT1G33470 AT1G33470	protein from Arabidopsis thaliana	1.1e-37
BLAST match view associations BLAST with AT2G46780 AT2G46780 AT2G46780	protein from Arabidopsis thaliana	3.5e-36
BLAST match view associations BLAST with AT1G20880 AT1G20880 AT1G20880	protein from Arabidopsis thaliana	1.5e-35
BLAST match view associations BLAST with AT1G76460 AT1G76460 AT1G76460	protein from Arabidopsis thaliana	3.1e-35
BLAST match view associations BLAST with AT1G22330 AT1G22330 AT1G22330	protein from Arabidopsis thaliana	8.5e-33
BLAST match view associations BLAST with AT1G78260 AT1G78260 AT1G78260	protein from Arabidopsis thaliana	1.1e-32
BLAST match view associations BLAST with ARP1 ARP1 ARP1 AT3G54770	protein from Arabidopsis thaliana	3.1e-28
BLAST match view associations BLAST with AT5G11412 AT5G11412 AT5G11412	protein from Arabidopsis thaliana	9.7e-25
BLAST match view associations BLAST with rbm38 rbm38 rbm38 RNA binding motif protein 38	gene_product from Danio rerio	1.6e-24
BLAST match view associations BLAST with rbm24b rbm24b rbm24b RNA binding motif protein 24b	gene_product from Danio rerio	1.6e-24
BLAST match view associations BLAST with rbm24a rbm24a rbm24a RNA binding motif protein 24a	gene_product from Danio rerio	2.0e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RBM24 protein	protein from Bos taurus	2.6e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Homo sapiens	2.6e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 Uncharacterized protein	protein from Sus scrofa	2.6e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	4.2e-24
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	4.2e-24
BLAST match view associations BLAST with rbm24-a rbm24-a rbm24-a RNA-binding protein 24-A	protein from Xenopus laevis	4.2e-24
BLAST match view associations BLAST with rbm24 rbm24 rbm24 RNA-binding protein 24	protein from Xenopus (Silurana) tropicalis	4.2e-24
BLAST match view associations BLAST with rbm24-b rbm24-b rbm24-b RNA-binding protein 24-B	protein from Xenopus laevis	4.2e-24
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	protein from Mus musculus	5.3e-24
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	gene from Rattus norvegicus	5.3e-24
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Gallus gallus	1.1e-23
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	1.4e-23
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	1.4e-23
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	protein from Mus musculus	1.8e-23
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	gene from Rattus norvegicus	1.8e-23
BLAST match view associations BLAST with sup-12 sup-12 sup-12	gene from Caenorhabditis elegans	2.3e-23
BLAST match view associations BLAST with sup-12 sup-12 sup-12 Protein SUP-12, isoform a	protein from Caenorhabditis elegans	2.3e-23
BLAST match view associations BLAST with RBM38 RBM38 RBM38 Uncharacterized protein	protein from Bos taurus	6.1e-23
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	6.1e-23
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	6.1e-23
BLAST match view associations BLAST with AT5G53680 AT5G53680 AT5G53680	protein from Arabidopsis thaliana	5.5e-22
BLAST match view associations BLAST with AT3G06970 AT3G06970 AT3G06970	protein from Arabidopsis thaliana	1.0e-20
BLAST match view associations BLAST with AT5G53720 AT5G53720 AT5G53720	protein from Arabidopsis thaliana	3.1e-19
BLAST match view associations BLAST with RBM24 RBM24 RBM24 Uncharacterized protein	protein from Canis lupus familiaris	7.5e-18
BLAST match view associations BLAST with UBA1A UBA1A UBA1A AT2G22090	protein from Arabidopsis thaliana	2.3e-15
BLAST match view associations BLAST with GRP7 GRP7 GRP7 AT2G21660	protein from Arabidopsis thaliana	4.9e-14
BLAST match view associations BLAST with AT4G26650 AT4G26650 AT4G26650	protein from Arabidopsis thaliana	5.3e-14
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ-associated protein 1	protein from Xenopus laevis	7.7e-14
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	1.3e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	1.3e-13
BLAST match view associations BLAST with dazap1 dazap1 dazap1 DAZ associated protein 1	gene_product from Danio rerio	1.4e-13
BLAST match view associations BLAST with AT3G07810 AT3G07810 AT3G07810	protein from Arabidopsis thaliana	1.7e-13
BLAST match view associations BLAST with AT5G55550 AT5G55550 AT5G55550	protein from Arabidopsis thaliana	1.9e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Bos taurus	2.2e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Gallus gallus	2.2e-13
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	gene from Rattus norvegicus	2.3e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Sus scrofa	2.3e-13
BLAST match view associations BLAST with Dazap1 Dazap1 Dazap1 DAZ associated protein 1	protein from Mus musculus	2.3e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-13
BLAST match view associations BLAST with DAZAP1 DAZAP1 DAZAP1 DAZ-associated protein 1	protein from Homo sapiens	2.4e-13
BLAST match view associations BLAST with AT1G17640 AT1G17640 AT1G17640	protein from Arabidopsis thaliana	3.9e-13
BLAST match view associations BLAST with Rbp6 Rbp6 Rbp6 RNA-binding protein 6	protein from Drosophila melanogaster	5.0e-13
BLAST match view associations BLAST with blt801 blt801 blt801 Glycine-rich RNA-binding protein blt801	protein from Hordeum vulgare	5.6e-13
BLAST match view associations BLAST with CCR1 CCR1 CCR1 AT4G39260	protein from Arabidopsis thaliana	5.6e-13
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene_product from Danio rerio	6.3e-13
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Gallus gallus	7.1e-13
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Gallus gallus	7.1e-13
BLAST match view associations BLAST with AT3G15010 AT3G15010 AT3G15010	protein from Arabidopsis thaliana	8.2e-13
BLAST match view associations BLAST with GRP4 GRP4 GRP4 AT3G23830	protein from Arabidopsis thaliana	9.1e-13
BLAST match view associations BLAST with GR-RBP2 GR-RBP2 GR-RBP2 AT4G13850	protein from Arabidopsis thaliana	1.5e-12
BLAST match view associations BLAST with Hrb27C Hrb27C Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C	protein from Drosophila melanogaster	1.5e-12
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Xenopus (Silurana) tropicalis	2.4e-12
BLAST match view associations BLAST with cirbp-b cirbp-b cirbp-b Cold-inducible RNA-binding protein B	protein from Xenopus laevis	2.4e-12
BLAST match view associations BLAST with zgc:77052 zgc:77052 zgc:77052	gene_product from Danio rerio	2.8e-12
BLAST match view associations BLAST with msi-1 msi-1 msi-1	gene from Caenorhabditis elegans	3.2e-12
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with msi msi msi musashi	protein from Drosophila melanogaster	5.3e-12
BLAST match view associations BLAST with AT2G41060 AT2G41060 AT2G41060	protein from Arabidopsis thaliana	6.0e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with MSI2 MSI2 MSI2 RNA-binding protein Musashi homolog 2	protein from Homo sapiens	6.4e-12
BLAST match view associations BLAST with hnrnpd hnrnpd hnrnpd heterogeneous nuclear ribonucleoprotein D	gene_product from Danio rerio	6.5e-12
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Gallus gallus	7.0e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Uncharacterized protein	protein from Gallus gallus	7.5e-12
BLAST match view associations BLAST with HNRNPD HNRNPD HNRNPD Heterogeneous nuclear ribonucleoprotein D0	protein from Homo sapiens	8.1e-12
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Rattus norvegicus	8.2e-12
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Canis lupus familiaris	8.7e-12
BLAST match view associations BLAST with UBA2A UBA2A UBA2A AT3G56860	protein from Arabidopsis thaliana	8.7e-12
BLAST match view associations BLAST with hnrnpab hnrnpab hnrnpab Hnrpab-prov protein	protein from Xenopus laevis	9.3e-12
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	protein from Mus musculus	9.8e-12
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Bos taurus	1.1e-11
BLAST match view associations BLAST with hnrpdl hnrpdl hnrpdl heterogeneous nuclear ribonucleoprotein D-like	gene_product from Danio rerio	1.1e-11
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with Hnrnpab Hnrnpab Hnrnpab heterogeneous nuclear ribonucleoprotein A/B	gene from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1	protein from Pongo abelii	1.2e-11
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1	protein from Mus musculus	1.2e-11
BLAST match view associations BLAST with Hnrnpa2b1 Hnrnpa2b1 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1	gene from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with HNRNPA2B1 HNRNPA2B1 HNRNPA2B1 Uncharacterized protein	protein from Sus scrofa	1.2e-11
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with HNRNPAB HNRNPAB HNRNPAB Uncharacterized protein	protein from Bos taurus	1.3e-11