BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029739
MEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRN
ILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAW
GDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRHATPPASV
SAASLYSSN

High Scoring Gene Products

Symbol, full name Information P value
AT5G19850 protein from Arabidopsis thaliana 2.7e-75
AT5G38520 protein from Arabidopsis thaliana 3.7e-18
AT4G36530 protein from Arabidopsis thaliana 8.8e-13
PPH
AT5G13800
protein from Arabidopsis thaliana 4.3e-07
AT3G10840 protein from Arabidopsis thaliana 0.00081

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029739
        (189 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2832896 - symbol:AT5G19850 species:3702 "Arabi...   759  2.7e-75   1
TAIR|locus:2159823 - symbol:AT5G38520 species:3702 "Arabi...   223  3.7e-18   1
TAIR|locus:2115440 - symbol:AT4G36530 species:3702 "Arabi...   175  8.8e-13   1
TAIR|locus:2159033 - symbol:PPH "AT5G13800" species:3702 ...   133  4.3e-07   1
TAIR|locus:2103242 - symbol:AT3G10840 species:3702 "Arabi...   109  0.00081   1


>TAIR|locus:2832896 [details] [associations]
            symbol:AT5G19850 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0016787 "hydrolase
            activity" evidence=ISS] InterPro:IPR000073 EMBL:CP002688
            GO:GO:0016787 PRINTS:PR00111 IPI:IPI00529562 RefSeq:NP_568381.1
            UniGene:At.31247 UniGene:At.66697 ProteinModelPortal:F4K2M9
            SMR:F4K2M9 PRIDE:F4K2M9 EnsemblPlants:AT5G19850.1 GeneID:832105
            KEGG:ath:AT5G19850 OMA:YTFETWG Uniprot:F4K2M9
        Length = 359

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 134/172 (77%), Positives = 156/172 (90%)

Query:     2 EPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESVRNI 61
             +PEICRG++L+NISLRMLHIKKQP+ GRP I+SFQNLLRNT  GKLF+K +A  E+V++I
Sbjct:   188 KPEICRGLMLINISLRMLHIKKQPFIGRPFIKSFQNLLRNTPVGKLFFKSIAKPETVKSI 247

Query:    62 LCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWG 121
             LCQCY+D+SQVT+ELVE IL+PGLE GA DVFLEFICYSGGPLPE+LLP VKCPVLIAWG
Sbjct:   248 LCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEDLLPLVKCPVLIAWG 307

Query:   122 DKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 173
             +KDPWEPIELGRAY NFD+VEDF+VLP+ GHCPQDE P +VNPL+ESFV RH
Sbjct:   308 EKDPWEPIELGRAYSNFDAVEDFVVLPDAGHCPQDEKPEMVNPLIESFVARH 359


>TAIR|locus:2159823 [details] [associations]
            symbol:AT5G38520 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016787 "hydrolase
            activity" evidence=ISS] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009657 "plastid
            organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
            evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=RCA] [GO:0019761 "glucosinolate
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] EMBL:CP002688
            GO:GO:0009941 GO:GO:0016787 GO:GO:0009534 IPI:IPI00846134
            RefSeq:NP_001078682.1 UniGene:At.20746 ProteinModelPortal:F4KBJ3
            SMR:F4KBJ3 PRIDE:F4KBJ3 EnsemblPlants:AT5G38520.2 GeneID:833840
            KEGG:ath:AT5G38520 OMA:TPILLIW Uniprot:F4KBJ3
        Length = 374

 Score = 223 (83.6 bits), Expect = 3.7e-18, P = 3.7e-18
 Identities = 54/169 (31%), Positives = 88/169 (52%)

Query:     4 EICRGMILLNISLRMLHIKK-QPWYGR---PLIRSFQNLLRNTAAGKLFYKMVATSESVR 59
             ++ +G++LLN +  M +      W  +   PL+     LL+        +  V   E+++
Sbjct:   193 DLVKGLVLLNCAGGMNNKAVFDDWRIKLLMPLLLLIDFLLKQRGIASALFNRVKDRENLK 252

Query:    60 NILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIA 119
             NIL   Y +   V + LVE I  P    GA D F+  +    GP P +L+P++  PVL+ 
Sbjct:   253 NILTNVYGNKDNVDDTLVEIIAGPANTEGALDAFVSILTGPPGPNPIKLIPEITKPVLVL 312

Query:   120 WGDKDPWEPIE--LGRAYGNF-DSVEDF--IVLPNVGHCPQDEAPHLVN 163
             WGD+D   P++  +G+ + +  D + +F   VL  VGHCPQD+ P LV+
Sbjct:   313 WGDQDGLTPLDGPVGKYFTSLPDQLPNFNLYVLQGVGHCPQDDRPDLVH 361


>TAIR|locus:2115440 [details] [associations]
            symbol:AT4G36530 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=ISS]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] InterPro:IPR000639
            PRINTS:PR00412 InterPro:IPR000073 EMBL:CP002687 GO:GO:0009941
            GO:GO:0016787 PRINTS:PR00111 EMBL:AL161589 EMBL:Z99708 HSSP:O31243
            EMBL:AY087588 EMBL:AK227038 IPI:IPI00542770 PIR:C85431
            RefSeq:NP_195371.1 UniGene:At.4614 ProteinModelPortal:O23227
            SMR:O23227 STRING:O23227 MEROPS:S33.A01 PRIDE:O23227
            EnsemblPlants:AT4G36530.2 GeneID:829805 KEGG:ath:AT4G36530
            TAIR:At4g36530 InParanoid:O23227 OMA:FENLRRP PhylomeDB:O23227
            ProtClustDB:PLN02578 ArrayExpress:O23227 Genevestigator:O23227
            InterPro:IPR026129 PANTHER:PTHR10992:SF20 Uniprot:O23227
        Length = 378

 Score = 175 (66.7 bits), Expect = 8.8e-13, P = 8.8e-13
 Identities = 42/154 (27%), Positives = 74/154 (48%)

Query:    31 LIRSFQNLLRNTAAGKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAA 90
             +++  + + +    G LF++    S  + ++L   Y D++ V + LVE I +P  +  A 
Sbjct:   221 IVKPLKEIFQRVVLGFLFWQAKQPSR-IESVLKSVYIDSTNVDDYLVESISKPATDPNAG 279

Query:    91 DVFLE----FICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIV 146
             +V+      F+        + +L ++ CP+L+ WGD DPW           F S    + 
Sbjct:   280 EVYYRLMTRFLTNQSRYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKIKAFYSNSSLVH 339

Query:   147 LPNVGHCPQDEAPHLVNPLVESFVTRH-ATPPAS 179
             L   GHCP DE P  VN  +  +++ + A+ PAS
Sbjct:   340 L-QAGHCPHDEVPEAVNKALLDWLSINIASKPAS 372


>TAIR|locus:2159033 [details] [associations]
            symbol:PPH "AT5G13800" species:3702 "Arabidopsis
            thaliana" [GO:0016787 "hydrolase activity" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0015996 "chlorophyll
            catabolic process" evidence=RCA;IMP] [GO:0080124 "pheophytinase
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            eggNOG:COG0596 EMBL:AB005230 GO:GO:0015996 EMBL:AY056386
            EMBL:AY070736 EMBL:AY149934 EMBL:AK317089 IPI:IPI00542352
            RefSeq:NP_196884.1 RefSeq:NP_850815.1 UniGene:At.23976
            ProteinModelPortal:Q9FFZ1 SMR:Q9FFZ1 MEROPS:S33.A34 PRIDE:Q9FFZ1
            EnsemblPlants:AT5G13800.1 EnsemblPlants:AT5G13800.2 GeneID:831225
            KEGG:ath:AT5G13800 TAIR:At5g13800 HOGENOM:HOG000006184
            InParanoid:Q9FFZ1 OMA:VGSFHYE PhylomeDB:Q9FFZ1
            ProtClustDB:CLSN2687043 BioCyc:ARA:AT5G13800-MONOMER
            BioCyc:MetaCyc:AT5G13800-MONOMER Genevestigator:Q9FFZ1
            GO:GO:0080124 Uniprot:Q9FFZ1
        Length = 484

 Score = 133 (51.9 bits), Expect = 4.3e-07, P = 4.3e-07
 Identities = 36/133 (27%), Positives = 64/133 (48%)

Query:    46 KLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLP 105
             +L ++ ++  ES+  IL Q Y D S   +++  +I++      AA  F   +   GG L 
Sbjct:   283 ELVWQKISDPESIAEILKQVYTDHSINVDKVFSRIVEVTQHPAAAASFASIMLAPGGELS 342

Query:   106 -EELLPQVK---CPVLIAWGDKDPW-EPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPH 160
               E L + K     + + +G +DPW  P+   +      +   + + P  GHCP DE P 
Sbjct:   343 FSEALSRCKENNVQICLMYGREDPWVRPLWGKKIKKEIPNAPYYEISP-AGHCPHDEVPE 401

Query:   161 LVNPLVESFVTRH 173
             +VN L+  ++ +H
Sbjct:   402 VVNYLMRGWI-KH 413


>TAIR|locus:2103242 [details] [associations]
            symbol:AT3G10840 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0016787 "hydrolase activity"
            evidence=ISS] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR000639
            PRINTS:PR00412 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009941 eggNOG:COG0596 GO:GO:0016787 EMBL:BT030399
            IPI:IPI00522470 RefSeq:NP_187695.3 UniGene:At.43524
            ProteinModelPortal:A4IJ41 SMR:A4IJ41 STRING:A4IJ41 PaxDb:A4IJ41
            PRIDE:A4IJ41 EnsemblPlants:AT3G10840.1 GeneID:820253
            KEGG:ath:AT3G10840 TAIR:At3g10840 HOGENOM:HOG000261696
            InParanoid:A4IJ41 OMA:PLNPYSM PhylomeDB:A4IJ41
            ProtClustDB:CLSN2680828 Genevestigator:A4IJ41 Uniprot:A4IJ41
        Length = 466

 Score = 109 (43.4 bits), Expect = 0.00081, P = 0.00081
 Identities = 43/138 (31%), Positives = 61/138 (44%)

Query:    45 GKLFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEF----ICYS 100
             G +  +M      V  +    Y D+ QVT+ +V+   +P    G     +EF    +  +
Sbjct:   313 GVMLVRMAINKFGVTAVRNAWY-DSKQVTDHVVQGYTKPLKAKGWDKALVEFTVATLTDN 371

Query:   101 GGP---LP-EELLPQVKCPVLIAWGDKD---P-WEPIELGRAYGNFDSVEDFIVLPNVGH 152
              G    LP  + L ++KCPVLI  GD D   P W    L RA     SV  F V+   GH
Sbjct:   372 NGSEKKLPLSKRLQEIKCPVLIVTGDTDRIVPAWNAERLARAIPG--SV--FEVIKKCGH 427

Query:   153 CPQDEAPHLVNPLVESFV 170
              PQ+E P     +V  F+
Sbjct:   428 LPQEEKPDEFISIVAKFL 445


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      189       189   0.00089  110 3  11 22  0.45    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  172 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.52u 0.08s 18.60t   Elapsed:  00:00:01
  Total cpu time:  18.52u 0.08s 18.60t   Elapsed:  00:00:01
  Start:  Mon May 20 23:56:16 2013   End:  Mon May 20 23:56:17 2013

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