BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029740
(189 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225459918|ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
[Vitis vinifera]
gi|147770824|emb|CAN76428.1| hypothetical protein VITISV_023565 [Vitis vinifera]
gi|297734735|emb|CBI16969.3| unnamed protein product [Vitis vinifera]
Length = 290
Score = 333 bits (853), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/171 (93%), Positives = 165/171 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 120 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 179
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+FAV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNG
Sbjct: 180 NLIFAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNG 239
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFF+QAYVTGEGPVENLA HLSDPF NNLLTVI+G AERAPTL
Sbjct: 240 RLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 290
>gi|356535308|ref|XP_003536189.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 287
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/171 (91%), Positives = 164/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDG TLNYFGK IPI
Sbjct: 117 YQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPI 176
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AEIVLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 177 NLILAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 236
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G+AERAPTL
Sbjct: 237 RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 287
>gi|339716054|gb|AEJ88274.1| putative chlorophyll a/b binding protein [Wolffia australiana]
Length = 279
Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/171 (92%), Positives = 163/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 109 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 168
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VL+GGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ A+LK KEIKNG
Sbjct: 169 NLVVAVIAEVVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAAILKAKEIKNG 228
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFFLQAYVTGEGPVENL+KHLSDPF NNLLTVIS +AER PTL
Sbjct: 229 RLAMFAMLGFFLQAYVTGEGPVENLSKHLSDPFGNNLLTVISSSAERVPTL 279
>gi|224127848|ref|XP_002329192.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
gi|118487642|gb|ABK95646.1| unknown [Populus trichocarpa]
gi|222870973|gb|EEF08104.1| light-harvesting complex II protein Lhcb5 [Populus trichocarpa]
Length = 290
Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 165/171 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 120 YQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 179
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE++LVGGAEY+RITNGL +DKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 180 NLVLAVVAEVILVGGAEYFRITNGLGFDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 239
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFF QAYVTGEGPVENLAKHLSDPF NNLLTVI+G+AERAP+L
Sbjct: 240 RLAMFAMLGFFFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPSL 290
>gi|255557841|ref|XP_002519950.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223540996|gb|EEF42554.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 292
Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 164/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFI+PEAFNKFGANCGPEAVWFKTGALLLDG TLNYFG +IPI
Sbjct: 122 YQAYELIHARWAMLGAAGFIVPEAFNKFGANCGPEAVWFKTGALLLDGGTLNYFGNSIPI 181
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VL+GGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ A+LKVKEIKNG
Sbjct: 182 NLVVAVIAEVVLLGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNG 241
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTV++G+AERAPTL
Sbjct: 242 RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVLAGSAERAPTL 292
>gi|356576567|ref|XP_003556402.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 288
Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 163/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDG TLNYFGK IPI
Sbjct: 118 YQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPI 177
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AEIVLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 178 NLIVAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 237
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G+ ERAPTL
Sbjct: 238 RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSVERAPTL 288
>gi|255638437|gb|ACU19528.1| unknown [Glycine max]
Length = 287
Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 163/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDG TLNYFGK IPI
Sbjct: 117 YQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPI 176
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
N + AV+AEIVLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 177 NFILAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 236
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G+AERAPTL
Sbjct: 237 RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 287
>gi|449447521|ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
gi|449510691|ref|XP_004163735.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Cucumis sativus]
Length = 288
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 162/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG NIPI
Sbjct: 118 YQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPI 177
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AVIAE+VLVGGAEYYRI NGL+ EDKLHPGGPFDPLGLA DPDQ A+LKVKEIKNG
Sbjct: 178 NLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNG 237
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISGNAER PTL
Sbjct: 238 RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 288
>gi|261351266|gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
Length = 287
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL YFGKNIPI
Sbjct: 117 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLYYFGKNIPI 176
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ A+LKVKEIKNG
Sbjct: 177 NLVLAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNG 236
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTG+GPVENLA HLSDPF NNLLTVI G ER PTL
Sbjct: 237 RLAMFSMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGATERVPTL 287
>gi|255645788|gb|ACU23386.1| unknown [Glycine max]
Length = 289
Score = 322 bits (824), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/173 (90%), Positives = 163/173 (94%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQA+ELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDG TLNYFGK I
Sbjct: 117 SKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPI 176
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
PINL+ AVIAEIVLVGGAEYYRI NGL+ EDKLHPGGPFDPLGLA DPDQ ALLKVKEIK
Sbjct: 177 PINLIVAVIAEIVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIK 236
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
NGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISG+AERAPTL
Sbjct: 237 NGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 289
>gi|356559931|ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 289
Score = 321 bits (823), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/173 (90%), Positives = 163/173 (94%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQA+ELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDG TLNYFGK I
Sbjct: 117 SKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPI 176
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
PINL+ AVIAEIVLVGGAEYYRI NGL+ EDKLHPGGPFDPLGLA DPDQ ALLKVKEIK
Sbjct: 177 PINLIVAVIAEIVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIK 236
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
NGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVISG+AERAPTL
Sbjct: 237 NGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL 289
>gi|162461137|ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|733456|gb|AAA64415.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
Length = 283
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAG +IPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPI
Sbjct: 113 YQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI 172
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLA DPDQ A+LKVKEIKNG
Sbjct: 173 NLVVAVIAEVVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNG 232
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTGEGPVENLAKHLSDPF NNLLTVISG AER P+L
Sbjct: 233 RLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283
>gi|194697528|gb|ACF82848.1| unknown [Zea mays]
Length = 283
Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAG +IPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPI
Sbjct: 113 YQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI 172
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE++LVGGAEYYRITNGLDLEDKLHPGGPFDPLGLA DPDQ A+LKVKEIKNG
Sbjct: 173 NLVVAVIAEVILVGGAEYYRITNGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNG 232
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTGEGPVENLAKHLSDPF NNLLTVISG AER P+L
Sbjct: 233 RLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283
>gi|242070573|ref|XP_002450563.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
gi|241936406|gb|EES09551.1| hypothetical protein SORBIDRAFT_05g007070 [Sorghum bicolor]
Length = 282
Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAG +IPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPI
Sbjct: 112 YQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI 171
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ A+LKVKEIKNG
Sbjct: 172 NLVVAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNG 231
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+ML FF+QAYVTGEGPVENLAKHLSDPF NNLLTVISG AER P+L
Sbjct: 232 RLAMFSMLAFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 282
>gi|356530963|ref|XP_003534048.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Glycine max]
Length = 291
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 162/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDG TLNYFGK IPI
Sbjct: 121 YQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPI 180
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AVIAEIVLVGGAEYYRI NGL+ EDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNG
Sbjct: 181 NLIVAVIAEIVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNG 240
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G+AERAPTL
Sbjct: 241 RLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSAERAPTL 291
>gi|116779208|gb|ABK21181.1| unknown [Picea sitchensis]
gi|116780325|gb|ABK21632.1| unknown [Picea sitchensis]
gi|116781512|gb|ABK22131.1| unknown [Picea sitchensis]
gi|116791342|gb|ABK25943.1| unknown [Picea sitchensis]
gi|116791754|gb|ABK26096.1| unknown [Picea sitchensis]
gi|148907198|gb|ABR16740.1| unknown [Picea sitchensis]
gi|224284432|gb|ACN39950.1| unknown [Picea sitchensis]
gi|224284582|gb|ACN40024.1| unknown [Picea sitchensis]
gi|224284686|gb|ACN40075.1| unknown [Picea sitchensis]
Length = 303
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/171 (88%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +IPI
Sbjct: 133 YQAYELIHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPI 192
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE++LVGGAEYYR TNGLD EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 193 NLIAAVVAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 252
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENLA HLSDPF NNLLTV+ G+ ERAPTL
Sbjct: 253 RLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 303
>gi|116783956|gb|ABK23158.1| unknown [Picea sitchensis]
Length = 303
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/171 (88%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +IPI
Sbjct: 133 YQAYELIHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPI 192
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE++LVGGAEYYR TNGLD EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 193 NLIAAVVAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 252
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENLA HLSDPF NNLLTV+ G+ ERAPTL
Sbjct: 253 RLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 303
>gi|162461210|ref|NP_001105698.1| light harvesting chlorophyll a/b binding protein5 precursor [Zea
mays]
gi|733454|gb|AAA64414.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
gi|414591311|tpg|DAA41882.1| TPA: chlorophyll a/b-binding apoprotein CP26 Precursor [Zea mays]
Length = 283
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 151/171 (88%), Positives = 159/171 (92%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAG +IPEA NKFGANCGPEAVWFKTGALLLDGNTL+YFG +IPI
Sbjct: 113 YQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNSIPI 172
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ A+LKVKEIKNG
Sbjct: 173 NLVVAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNG 232
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTGEGPVENLAKHLSDPF NNLLTVISG AER P+L
Sbjct: 233 RLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283
>gi|224285677|gb|ACN40554.1| unknown [Picea sitchensis]
Length = 278
Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/171 (88%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +IPI
Sbjct: 108 YQAYELIHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPI 167
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE++LVGGAEYYR TNGLD EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 168 NLIAAVVAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 227
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENLA HLSDPF NNLLTV+ G+ ERAPTL
Sbjct: 228 RLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 278
>gi|224285421|gb|ACN40433.1| unknown [Picea sitchensis]
Length = 303
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/171 (87%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFI+PEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +IPI
Sbjct: 133 YQAYELIHARWAMLGAAGFIMPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPI 192
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE++LVGGAEYYR TNGLD EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 193 NLIAAVVAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 252
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENLA HLSDPF NNLLTV+ G+ ERAPTL
Sbjct: 253 RLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 303
>gi|1644289|emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [Brassica juncea]
Length = 283
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/171 (87%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEA NK+GANCGPEAVWFKTGALLLDGNTL+YFGKNIPI
Sbjct: 113 YQAFELIHARWAMLGAAGCIIPEALNKYGANCGPEAVWFKTGALLLDGNTLSYFGKNIPI 172
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+ E+VL+GGAEYYRITNGLD EDKLHPGGPFDPL LAKDP+Q ALLKVKEIKNG
Sbjct: 173 NLVLAVVGEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLDLAKDPEQGALLKVKEIKNG 232
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTGEGPVENL+KHLSDPF NNLLTVI+G AERAPTL
Sbjct: 233 RLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVIAGTAERAPTL 283
>gi|116785086|gb|ABK23587.1| unknown [Picea sitchensis]
Length = 303
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/171 (87%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +I I
Sbjct: 133 YQAYELIHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIHI 192
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE++LVGGAEYYR TNGLD EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 193 NLIAAVVAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 252
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENLA HLSDPF NNLLTV+ G+ ERAPTL
Sbjct: 253 RLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTVLGGSLERAPTL 303
>gi|110377793|gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
Length = 285
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/171 (91%), Positives = 166/171 (97%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGF+IPEAFNKFGA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 115 YQAYELIHARWAMLGAAGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPI 174
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQ A+LKVKEIKNG
Sbjct: 175 NLVVAVVAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNG 234
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFF+QAYVTG+GPVENLA HLSDPF NNLLTVI+G AERAPTL
Sbjct: 235 RLAMFAMLGFFIQAYVTGKGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 285
>gi|169743370|gb|ACA66263.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 261
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/167 (88%), Positives = 155/167 (92%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH RWAMLG AGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPINL+
Sbjct: 95 EVIHCRWAMLGVAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLIL 154
Query: 83 AVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAM 142
AVIAE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNGRLAM
Sbjct: 155 AVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAM 214
Query: 143 FAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
F+MLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVIS AER P+L
Sbjct: 215 FSMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISAGAERTPSL 261
>gi|297809249|ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
gi|297318345|gb|EFH48767.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/171 (91%), Positives = 165/171 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 110 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 169
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 170 NLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 229
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AERAPTL
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>gi|15235029|ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName: Full=Chlorophyll a-b binding protein CP26, chloroplastic;
AltName: Full=LHCB5; AltName: Full=LHCIIc; AltName:
Full=Light-harvesting complex II protein 5; Flags:
Precursor
gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein [Arabidopsis thaliana]
gi|11908106|gb|AAG41482.1|AF326900_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642916|gb|AAK00400.1|AF339718_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|14190463|gb|AAK55712.1|AF380631_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|15983446|gb|AAL11591.1|AF424597_1 AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|332657469|gb|AEE82869.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
Length = 280
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/171 (91%), Positives = 165/171 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 110 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 169
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 170 NLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 229
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AERAPTL
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>gi|125533937|gb|EAY80485.1| hypothetical protein OsI_35663 [Oryza sativa Indica Group]
Length = 283
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/173 (89%), Positives = 162/173 (93%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +I
Sbjct: 111 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 170
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
PINL+ AV AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIK
Sbjct: 171 PINLIVAVAAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIK 230
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
NGRLAMF+MLGFF+QAYVTGEGPVENL+KHLSDPF NNLLTVISG AER P+L
Sbjct: 231 NGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 283
>gi|115484899|ref|NP_001067593.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|62733869|gb|AAX95978.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|108864184|gb|ABA92338.2| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
gi|113644815|dbj|BAF27956.1| Os11g0242800 [Oryza sativa Japonica Group]
gi|125576735|gb|EAZ17957.1| hypothetical protein OsJ_33501 [Oryza sativa Japonica Group]
gi|215692422|dbj|BAG87842.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704351|dbj|BAG93785.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/173 (89%), Positives = 162/173 (93%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +I
Sbjct: 111 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 170
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
PINL+ AV AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIK
Sbjct: 171 PINLIVAVAAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIK 230
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
NGRLAMF+MLGFF+QAYVTGEGPVENL+KHLSDPF NNLLTVISG AER P+L
Sbjct: 231 NGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 283
>gi|21593520|gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
Length = 280
Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/171 (91%), Positives = 165/171 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 110 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 169
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GG+EYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 170 NLVLAVVAEVVLLGGSEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 229
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMFAMLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVI+G AERAPTL
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERAPTL 280
>gi|108864186|gb|ABG22426.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 222
Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 155/173 (89%), Positives = 162/173 (93%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +I
Sbjct: 50 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 109
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
PINL+ AV AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIK
Sbjct: 110 PINLIVAVAAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIK 169
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
NGRLAMF+MLGFF+QAYVTGEGPVENL+KHLSDPF NNLLTVISG AER P+L
Sbjct: 170 NGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 222
>gi|149391069|gb|ABR25552.1| chloroplast chlorophyll a-b binding proteinr [Oryza sativa Indica
Group]
Length = 201
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/173 (89%), Positives = 162/173 (93%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +I
Sbjct: 29 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 88
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
PINL+ AV AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIK
Sbjct: 89 PINLIVAVAAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIK 148
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
NGRLAMF+MLGFF+QAYVTGEGPVENL+KHLSDPF NNLLTVISG AER P+L
Sbjct: 149 NGRLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 201
>gi|15487754|gb|AAL00920.1|AF398742_1 ASCAB9 [Centromadia pungens]
Length = 171
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 163/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|15487738|gb|AAL00912.1|AF398734_1 ASCAB9-C [Argyroxiphium sandwicense]
gi|15487744|gb|AAL00915.1|AF398737_1 ASCAB9-C [Dubautia laxa]
Length = 171
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+ E+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVTEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|19184|emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
Length = 286
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 163/171 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 116 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 175
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ A+LKVKEIKNG
Sbjct: 176 NLILAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNG 235
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTG+GPVENLA HLSDPF NNLLTVI G +ER PTL
Sbjct: 236 RLAMFSMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL 286
>gi|15487716|gb|AAL00901.1|AF398723_1 ASCAB9-A [Argyroxiphium caliginis]
gi|15487720|gb|AAL00903.1|AF398725_1 ASCAB9-A [Dubautia laevigata]
gi|15487726|gb|AAL00906.1|AF398728_1 ASCAB9-A [Dubautia plantaginea]
gi|15487730|gb|AAL00908.1|AF398730_1 ASCAB9-A [Dubautia sherffiana]
gi|15487732|gb|AAL00909.1|AF398731_1 ASCAB9-A [Wilkesia gymnoxiphium]
gi|15487734|gb|AAL00910.1|AF398732_1 ASCAB9-B [Argyroxiphium caliginis]
gi|15487736|gb|AAL00911.1|AF398733_1 ASCAB9-B [Argyroxiphium sandwicense]
gi|15487740|gb|AAL00913.1|AF398735_1 ASCAB9-B [Dubautia laevigata]
gi|15487742|gb|AAL00914.1|AF398736_1 ASCAB9-C [Dubautia latifolia]
gi|15487746|gb|AAL00916.1|AF398738_1 ASCAB9-B [Dubautia plantaginea]
gi|15487748|gb|AAL00917.1|AF398739_1 ASCAB9-C [Dubautia scabra]
gi|15487750|gb|AAL00918.1|AF398740_1 ASCAB9-B [Wilkesia gymnoxiphium]
gi|15487758|gb|AAL00922.1|AF398744_1 ASCAB9 [Harmonia nutans]
gi|15487760|gb|AAL00923.1|AF398745_1 ASCAB9 [Osmadenia tenella]
gi|15487764|gb|AAL00925.1|AF398747_1 ASCAB9 [Anisocarpus scabridus]
gi|156046244|gb|ABU42590.1| ASCAB9 [Dubautia arborea]
gi|156046246|gb|ABU42591.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/171 (90%), Positives = 162/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|160713963|gb|ABX47017.1| chloroplast chlorophyll a/b binding protein cab-PhE9 [Phyllostachys
edulis]
Length = 283
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLL+GNTLNYFG +IPI
Sbjct: 113 YQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLEGNTLNYFGNSIPI 172
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNG
Sbjct: 173 NLAVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNG 232
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVIS AER P+L
Sbjct: 233 RLAMFSMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISAGAERTPSL 283
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
+DP GL+K+PD FA + E+ + R AM GF +
Sbjct: 98 YDPFGLSKNPDNFARYQAYELIHARWAMLGAAGFII 133
>gi|156046248|gb|ABU42592.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 162/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVE+LA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVESLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|156046250|gb|ABU42593.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+EL HARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELTHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|15487724|gb|AAL00905.1|AF398727_1 ASCAB9-A [Dubautia laxa]
Length = 171
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 162/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF++AYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIKAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|15487762|gb|AAL00924.1|AF398746_1 ASCAB9 [Carlquistia muirii]
Length = 171
Score = 298 bits (764), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYV G+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVAGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|156046252|gb|ABU42594.1| ASCAB9 [Dubautia arborea]
Length = 171
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+EL HARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELTHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA H+SDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHMSDPFGNNLLTVISGNIERVPTL 171
>gi|15487756|gb|AAL00921.1|AF398743_1 ASCAB9 [Deinandra lobbii]
Length = 171
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+ PVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQCPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|15487752|gb|AAL00919.1|AF398741_1 ASCAB9-C [Wilkesia gymnoxiphium]
Length = 171
Score = 298 bits (763), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVI GN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVIYGNIERVPTL 171
>gi|15487728|gb|AAL00907.1|AF398729_1 ASCAB9-A [Dubautia raillardioides]
Length = 171
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNI I
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIHI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|357157014|ref|XP_003577654.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPI
Sbjct: 116 YQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI 175
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNG
Sbjct: 176 NLILAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNG 235
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGPVENL+ HLSDPF NNLLTVISG AER P+L
Sbjct: 236 RLAMFSMLGFFIQAYVTGEGPVENLSAHLSDPFGNNLLTVISGAAERTPSL 286
>gi|15487718|gb|AAL00902.1|AF398724_1 ASCAB9-A [Argyroxiphium sandwicense]
Length = 171
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKT ALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTRALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF++AYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIKAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|22750|emb|CAA78900.1| Lhcb5 protein [Pinus sylvestris]
gi|1093837|prf||2104448A Lhcb5 gene
Length = 302
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/171 (87%), Positives = 161/171 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +IPI
Sbjct: 132 YQAYELIHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPI 191
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE+VLVGGAEYYR TNGL+ +DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 192 NLIAAVVAEVVLVGGAEYYRATNGLNFDDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 251
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFFLQAYVTGEGPVENLA HLSDPF NN+LTV+ G+ ERAPTL
Sbjct: 252 RLAMFSMLGFFLQAYVTGEGPVENLAAHLSDPFGNNILTVLGGSLERAPTL 302
>gi|159147189|gb|ABW90989.1| LHCB5 [Phyllostachys edulis]
Length = 283
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 158/171 (92%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLL+GNTLNYFG +IPI
Sbjct: 113 YQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLEGNTLNYFGNSIPI 172
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL AV+AE+VLVGGAEYYRI NGLDLE KLHPGGPFDPLGLA DPDQ A LKVKEIKNG
Sbjct: 173 NLAVAVVAEVVLVGGAEYYRIINGLDLEGKLHPGGPFDPLGLASDPDQAAPLKVKEIKNG 232
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF MLGFF+QAYVTGEGPVENLAKHLSDPF NNLLTVIS AERAP+L
Sbjct: 233 RLAMFPMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISAGAERAPSL 283
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
+DP GL+K+PD FA + E+ + R AM GF +
Sbjct: 98 YDPFGLSKNPDNFARYQAYELIHARWAMLGAAGFII 133
>gi|15487722|gb|AAL00904.1|AF398726_1 ASCAB9-A [Dubautia latifolia]
Length = 171
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 160/171 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAG IIPEAFNK+GA+CGPEAVWFKTGALLLDGNTLNYFGKNI I
Sbjct: 1 YQAFELIHARWAMLGAAGCIIPEAFNKYGASCGPEAVWFKTGALLLDGNTLNYFGKNIHI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLH GGPFDPLGLAKDPDQFALLKVKEIKNG
Sbjct: 61 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHHGGPFDPLGLAKDPDQFALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+M FF+QAYVTG+GPVENLA HLSDPF NNLLTVISGN ER PTL
Sbjct: 121 RLAMFSMFAFFIQAYVTGQGPVENLASHLSDPFGNNLLTVISGNIERVPTL 171
>gi|302796621|ref|XP_002980072.1| light-harvesting complex [Selaginella moellendorffii]
gi|302811558|ref|XP_002987468.1| light-harvesting complex [Selaginella moellendorffii]
gi|300144874|gb|EFJ11555.1| light-harvesting complex [Selaginella moellendorffii]
gi|300152299|gb|EFJ18942.1| light-harvesting complex [Selaginella moellendorffii]
Length = 271
Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/167 (85%), Positives = 151/167 (90%), Gaps = 1/167 (0%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGF+IPEAFNKFGA CGPEAVWFKTGALLLDG TLNYFG NIPI
Sbjct: 106 YQAYELIHARWAMLGAAGFVIPEAFNKFGAQCGPEAVWFKTGALLLDGGTLNYFGANIPI 165
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE++LVGGAEYYR N L L D+LHPGGPFDPLGLAKDPD FALLKVKEIKNG
Sbjct: 166 NLVLAVLAEVILVGGAEYYRSINNLGL-DRLHPGGPFDPLGLAKDPDNFALLKVKEIKNG 224
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAER 185
RLAMFAMLGFF+QAY TGEGPVENL HLSDPF NNLL+VI+G E+
Sbjct: 225 RLAMFAMLGFFIQAYATGEGPVENLTTHLSDPFGNNLLSVIAGGIEK 271
>gi|168068372|ref|XP_001786046.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662227|gb|EDQ49143.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/175 (80%), Positives = 155/175 (88%), Gaps = 4/175 (2%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGF++PEAFNKFGA CGPEAVW+KTGALLL+G+++ YFG +PI
Sbjct: 96 YQAYELIHARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPI 155
Query: 79 NLVFAVIAEIVLVGGAEYYRITN----GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 134
NL AVIAE++LVGGAEYYR TN GL D+LHPGG FDPLGLAKDPDQFALLKVKE
Sbjct: 156 NLAAAVIAEVILVGGAEYYRSTNKDVYGLQDLDRLHPGGAFDPLGLAKDPDQFALLKVKE 215
Query: 135 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
IKNGRLAMF+MLGFF+QAYVTGEGPVENLA HLSDPF NNLLTVI G AER P+L
Sbjct: 216 IKNGRLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTVIQGTAERTPSL 270
>gi|18958|emb|CAA44777.1| Precursor of CP29, core chlorophyll a/b binding (CAB) protein of
photosystem II (PSII) [Hordeum vulgare subsp. vulgare]
gi|326511355|dbj|BAJ87691.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|445122|prf||1908428A chlorophyll a/b-binding protein
Length = 286
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/171 (87%), Positives = 159/171 (92%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPI
Sbjct: 116 YQAFELIHARWAMLGAAGFIIPEALNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPI 175
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL+ AV+AE+VLVGGAEYYRITNGL+ +DKLHPGGPFDPLGLA DPDQ ALLKVKEIKNG
Sbjct: 176 NLILAVVAEVVLVGGAEYYRITNGLEFDDKLHPGGPFDPLGLATDPDQAALLKVKEIKNG 235
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
RLAMF+MLGFF+QAYVTGEGP ENL HLSDPF NNLLTVISG AER P+L
Sbjct: 236 RLAMFSMLGFFIQAYVTGEGPFENLCAHLSDPFGNNLLTVISGAAERVPSL 286
>gi|168000216|ref|XP_001752812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168000420|ref|XP_001752914.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695975|gb|EDQ82316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696077|gb|EDQ82418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/175 (80%), Positives = 157/175 (89%), Gaps = 5/175 (2%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGF++PEAFNKFGA CGPEAVW+KTGALLL+G+++ YFG +P+
Sbjct: 54 YQAYELIHARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPL 113
Query: 79 NLVFAVIAEIVLVGGAEYYRITN----GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 134
NL AVIAE++LVGGAEYYR TN G DL D+LHPGG FDPLGLAKDPDQFALLKVKE
Sbjct: 114 NLAAAVIAEVILVGGAEYYRSTNKSPLGSDL-DRLHPGGAFDPLGLAKDPDQFALLKVKE 172
Query: 135 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
IKNGRLAMF+MLGFF+QAYVTGEGPVENL+ HLSDPF NNLLTVI G AERAP+L
Sbjct: 173 IKNGRLAMFSMLGFFVQAYVTGEGPVENLSAHLSDPFGNNLLTVIQGTAERAPSL 227
>gi|154357560|gb|ABS78804.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/149 (93%), Positives = 145/149 (97%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AVIAE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 61 NLVLAVIAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
RLAMFAMLGFF+QAYVTGEGPVENLAKHL
Sbjct: 121 RLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|223949713|gb|ACN28940.1| unknown [Zea mays]
Length = 159
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/159 (87%), Positives = 147/159 (92%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVL 90
MLGAAG +IPEA NKFGANCGPEAVWFKTGALLLDGNTL+YFG +IPINLV AVIAE+VL
Sbjct: 1 MLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNSIPINLVVAVIAEVVL 60
Query: 91 VGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
VGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ A+LKVKEIKNGRLAMF+M FF+
Sbjct: 61 VGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMFAFFI 120
Query: 151 QAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
QAYVTGEGPVENLAKHLSDPF NNLLTVISG AER P+L
Sbjct: 121 QAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 159
>gi|215740823|dbj|BAG96979.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 159
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/159 (89%), Positives = 149/159 (93%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVL 90
MLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +IPINL+ AV AE+VL
Sbjct: 1 MLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLIVAVAAEVVL 60
Query: 91 VGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
VGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNGRLAMF+MLGFF+
Sbjct: 61 VGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLGFFI 120
Query: 151 QAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
QAYVTGEGPVENL+KHLSDPF NNLLTVISG AER P+L
Sbjct: 121 QAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 159
>gi|168068370|ref|XP_001786045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662226|gb|EDQ49142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 152/179 (84%), Gaps = 5/179 (2%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S YQAYELIHARWA+L AAGF+ P AFNKFG+ CGPEA+W+KTGALLL+G+++ YFG
Sbjct: 30 SLKSYQAYELIHARWAILRAAGFVPPNAFNKFGSVCGPEAMWWKTGALLLEGDSIKYFGA 89
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITN----GLDLEDKLHPGGPFDPLGLAKDPDQFALL 130
+PINL AVI+E+ LVGG+EYYR TN G DL D+LHPGG FDPLGLAKDPDQFALL
Sbjct: 90 TVPINLAAAVISEVNLVGGSEYYRSTNKSPLGSDL-DRLHPGGAFDPLGLAKDPDQFALL 148
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
KVKEI NGRLAMF+MLGFF++AYVTGEGPVENLA HLSDPF NNLLTVI G AER P+L
Sbjct: 149 KVKEIMNGRLAMFSMLGFFVKAYVTGEGPVENLAAHLSDPFGNNLLTVIQGTAERTPSL 207
>gi|118489770|gb|ABK96685.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 302
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/141 (91%), Positives = 136/141 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 120 YQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 179
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE++LVGGAEY+RITNGL +DKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 180 NLVLAVVAEVILVGGAEYFRITNGLGFDDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 239
Query: 139 RLAMFAMLGFFLQAYVTGEGP 159
RLAMFAMLGFFLQAYVTG+ P
Sbjct: 240 RLAMFAMLGFFLQAYVTGDVP 260
>gi|154357502|gb|ABS78775.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357504|gb|ABS78776.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357506|gb|ABS78777.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357508|gb|ABS78778.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357510|gb|ABS78779.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357512|gb|ABS78780.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357514|gb|ABS78781.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357516|gb|ABS78782.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357518|gb|ABS78783.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357520|gb|ABS78784.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357522|gb|ABS78785.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357524|gb|ABS78786.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357526|gb|ABS78787.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357528|gb|ABS78788.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357530|gb|ABS78789.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357532|gb|ABS78790.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357534|gb|ABS78791.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357536|gb|ABS78792.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357538|gb|ABS78793.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357540|gb|ABS78794.1| At4g10340-like protein [Arabidopsis lyrata subsp. lyrata]
gi|154357542|gb|ABS78795.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357544|gb|ABS78796.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357546|gb|ABS78797.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357548|gb|ABS78798.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357550|gb|ABS78799.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357552|gb|ABS78800.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357554|gb|ABS78801.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357556|gb|ABS78802.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357558|gb|ABS78803.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357562|gb|ABS78805.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357566|gb|ABS78807.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357568|gb|ABS78808.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357572|gb|ABS78810.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
gi|154357574|gb|ABS78811.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/149 (92%), Positives = 145/149 (97%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 61 NLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
RLAMFAMLGFF+QAYVTGEGPVENLAKHL
Sbjct: 121 RLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|154357564|gb|ABS78806.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/149 (91%), Positives = 144/149 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 61 NLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
RLAMF MLGFF+QAYVTGEGPVENLAKHL
Sbjct: 121 RLAMFGMLGFFIQAYVTGEGPVENLAKHL 149
>gi|154357570|gb|ABS78809.1| At4g10340-like protein [Arabidopsis lyrata subsp. petraea]
Length = 149
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/149 (91%), Positives = 144/149 (96%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITNGLD EDKLHPGGPFDPLGLAKDP+Q ALLKVKEIKNG
Sbjct: 61 NLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
RLAMF MLGFF+QAYVTGEGPVENLAKHL
Sbjct: 121 RLAMFXMLGFFIQAYVTGEGPVENLAKHL 149
>gi|154357500|gb|ABS78774.1| At4g10340-like protein [Arabidopsis halleri subsp. halleri]
Length = 149
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/149 (91%), Positives = 143/149 (95%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQA+ELIHARWAMLGAAGFIIPEA NK+GA CGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 1 YQAFELIHARWAMLGAAGFIIPEALNKYGAKCGPEAVWFKTGALLLDGNTLNYFGKNIPI 60
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VL+GGAEYYRITN LD EDKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 61 NLVLAVVAEVVLLGGAEYYRITNELDFEDKLHPGGPFDPLGLAKDPDQGALLKVKEIKNG 120
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
RLAMFAMLGFF+QAYVTGEGPVENLAKHL
Sbjct: 121 RLAMFAMLGFFIQAYVTGEGPVENLAKHL 149
>gi|226358407|gb|ACO51066.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 240
Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/120 (95%), Positives = 117/120 (97%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI
Sbjct: 121 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 180
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NLV AV+AE+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNG
Sbjct: 181 NLVVAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNG 240
>gi|356510907|ref|XP_003524175.1| PREDICTED: uncharacterized protein LOC100789010 [Glycine max]
Length = 320
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/109 (89%), Positives = 103/109 (94%)
Query: 81 VFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 140
+ AV+AEIVLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLAKDPDQ ALLKVKEIKNGRL
Sbjct: 212 ILAVVAEIVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRL 271
Query: 141 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
AMFAMLGF+ QAYVTGEGPVENLAKHLSDPF NNLLTVI+G+ ERAPTL
Sbjct: 272 AMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSTERAPTL 320
>gi|62733870|gb|AAX95979.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|77549543|gb|ABA92340.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 225
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/102 (89%), Positives = 96/102 (94%)
Query: 88 IVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 147
+VLVGGAEYYRI NGLDLEDKLHPGGPFDPLGLA DPDQ ALLKVKEIKNGRLAMF+MLG
Sbjct: 124 VVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSMLG 183
Query: 148 FFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
FF+QAYVTGEGPVENL+KHLSDPF NNLLTVISG AER P+L
Sbjct: 184 FFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL 225
>gi|384253873|gb|EIE27347.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 126/203 (62%), Gaps = 29/203 (14%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
T + Y+AYELIHARWAML AAG IIPE GA WF+TGA +L+G TLN
Sbjct: 133 KDTATVEKYRAYELIHARWAMLAAAGIIIPEGLQANGAAI-KGGTWFETGAEMLNGGTLN 191
Query: 71 YFGK-----NIPINLVFAVIAEIVLVGGAEYYR-------------------ITNGLDLE 106
YF N P+ L V+ E+ L+G E YR I +GLD
Sbjct: 192 YFAVPWGIINNPLPLFLVVVIEVALLGAVERYRQSGEGPPGYSPGVGKFDSSIFSGLD-- 249
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
L+PGGPFDPLGLA DP+ FA LKVKEIKNGRLA+ ++LGF +Q+YVTGEGP N +KH
Sbjct: 250 -NLYPGGPFDPLGLADDPETFAELKVKEIKNGRLALISVLGFAVQSYVTGEGPYANWSKH 308
Query: 167 LSDPFANNLLTVISGNAERAPTL 189
++DPF NLLT+I G +R PTL
Sbjct: 309 VADPFGYNLLTII-GAEDRVPTL 330
>gi|307106802|gb|EFN55047.1| hypothetical protein CHLNCDRAFT_35818 [Chlorella variabilis]
Length = 285
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/194 (53%), Positives = 124/194 (63%), Gaps = 23/194 (11%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQA EL+HARWAML AAG IIPE GA+ A WF+TGA +L+G TLN+F I
Sbjct: 94 SKYQANELLHARWAMLAAAGAIIPEGLAANGADV-KGATWFETGAAMLNGGTLNWFAVPI 152
Query: 77 -----PINLVFAVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGGPF 115
P+ L V A + L+G AE YR T + D D L+PGGPF
Sbjct: 153 ANISNPLPLFVVVAANVALMGAAENYRRTGEGPAGYSPGVGKFDESAYDSMDSLYPGGPF 212
Query: 116 DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
DPLGLA DP+ A LKVKEIKNGRLAM + LGF +QA VTGEGP N +KH++DPF NL
Sbjct: 213 DPLGLADDPEVLAELKVKEIKNGRLAMVSFLGFAVQAAVTGEGPYANWSKHVADPFGYNL 272
Query: 176 LTVISGNAERAPTL 189
LT+++G +RAPTL
Sbjct: 273 LTILAGE-DRAPTL 285
>gi|302835678|ref|XP_002949400.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
gi|300265227|gb|EFJ49419.1| hypothetical protein VOLCADRAFT_104309 [Volvox carteri f.
nagariensis]
Length = 286
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 128/203 (63%), Gaps = 29/203 (14%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
T + + Y+ YEL+HARWAML AAG +IPE GAN VWF+TGA +L+G TLN
Sbjct: 89 KDTETVAKYREYELLHARWAMLAAAGILIPEGLQANGANI-KGGVWFETGAEMLNGGTLN 147
Query: 71 YFGKNIPINLV------FAVIA-EIVLVGGAEYYRITNG-----------------LDLE 106
YF +P +V FAVIA E+ L+G E+YR NG +
Sbjct: 148 YFA--VPWGIVSNPLPLFAVIAIEVGLMGAVEFYR-RNGTGPAGYSPGIGKFDSSVFEGL 204
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
D ++PGGPFDPLGLA DP+ F LKVKEIKNGRLAM ++L F +Q+YVTGEGP N KH
Sbjct: 205 DSIYPGGPFDPLGLADDPEVFQELKVKEIKNGRLAMVSVLAFAIQSYVTGEGPYTNWIKH 264
Query: 167 LSDPFANNLLTVISGNAERAPTL 189
+ DPF NLLTV+ GN +R PTL
Sbjct: 265 VQDPFGYNLLTVL-GNEDRVPTL 286
>gi|384253398|gb|EIE26873.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 250
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 115/162 (70%), Gaps = 7/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE K G + G EAVWFK GA + + LNY G + +
Sbjct: 80 YREIEVIHARWAMLGALGCVTPELLAKNGVSFG-EAVWFKAGAQIFGSDGLNYLGNSSLV 138
Query: 79 N---LVFAVIAEIVLVGGAEYYRITN---GLDLEDKLHPGGPFDPLGLAKDPDQFALLKV 132
+ ++ + +++L+GGAE YR GL+ D L+PGGPFDPLGLA DPD F+ LKV
Sbjct: 139 HAQSIIATLACQVILMGGAEAYRAAGEGPGLEGLDSLYPGGPFDPLGLADDPDTFSELKV 198
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 199 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNN 240
>gi|384252962|gb|EIE26437.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 113/162 (69%), Gaps = 7/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE K G + G EAVWFK GA + + LNY G +
Sbjct: 75 YREIEVIHARWAMLGALGCVTPELLAKNGVSFG-EAVWFKAGAQIFGSDGLNYLGNPSLV 133
Query: 79 N---LVFAVIAEIVLVGGAEYYRITN---GLDLEDKLHPGGPFDPLGLAKDPDQFALLKV 132
+ ++ + +++L+GGAE YR G++ D L+PGGPFDPLGLA DPD FA LK
Sbjct: 134 HAQSIIATLACQVILMGGAEAYRANGEGPGVEGLDSLYPGGPFDPLGLADDPDTFAELKT 193
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 194 KEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPGVNN 235
>gi|159475641|ref|XP_001695927.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
gi|12060444|dbj|BAB20613.1| CP26 [Chlamydomonas reinhardtii]
gi|158275487|gb|EDP01264.1| minor chlorophyll a-b binding protein of photosystem II
[Chlamydomonas reinhardtii]
Length = 289
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 125/199 (62%), Gaps = 29/199 (14%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
+ + Y+ EL+HARWAML AAG +IPE GAN WF+TGA +L+G TLNYF
Sbjct: 96 TVAKYRENELLHARWAMLAAAGILIPEGLQANGANI-KGGTWFETGAEMLNGGTLNYFA- 153
Query: 75 NIPINLV------FAVIA-EIVLVGGAEYYRITNG-----------------LDLEDKLH 110
+P +V FAVIA E+ L+G E+YR NG D D L+
Sbjct: 154 -VPWGIVSNPLPLFAVIAVEVGLMGAVEFYR-RNGTGPAGYSPGIGKFDSSVFDGLDPLY 211
Query: 111 PGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
PGGPFDPLGLA DP+ LKVKEIKNGRLAM ++LGF +Q+YVTGEGP N KH++DP
Sbjct: 212 PGGPFDPLGLADDPEVLQELKVKEIKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADP 271
Query: 171 FANNLLTVISGNAERAPTL 189
F NLLTV+ G ER PTL
Sbjct: 272 FGYNLLTVL-GAEERTPTL 289
>gi|2407314|gb|AAB70556.1| chlorophyll a/b binding protein [Tetraselmis sp. RG-15]
Length = 251
Score = 172 bits (436), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 114/162 (70%), Gaps = 7/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + L+Y G + +
Sbjct: 79 YRELELIHARWAMLGALGCVTPELLSKYAGVEFGEAVWFKAGAQIFADGGLDYLGNSSLV 138
Query: 77 PINLVFAVI-AEIVLVGGAEYYRITNG---LDLEDKLHPGGPFDPLGLAKDPDQFALLKV 132
+ A++ ++VL+GGAE +R+ G DL DKLHPGG FDPLGLA DPD F+ LKV
Sbjct: 139 HAQSILAILGCQVVLMGGAEAFRVNGGPLGEDL-DKLHPGGAFDPLGLADDPDTFSELKV 197
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GPVEN A+H++DP +N
Sbjct: 198 KEIKNGRLAMFSMFGFFVQAIVTGKGPVENWAEHIADPSGSN 239
>gi|87313239|gb|ABD37916.1| light-harvesting chlorophyll-a/b binding protein Lhcb5
[Chlamydomonas incerta]
Length = 259
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 125/199 (62%), Gaps = 29/199 (14%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
+ + Y+ EL+HARWAML AAG +IPE GAN WF+TGA +L+G TLNYF
Sbjct: 66 TVAKYRENELLHARWAMLAAAGILIPEGLQANGANI-KGGTWFETGAEMLNGGTLNYFA- 123
Query: 75 NIPINLV------FAVIA-EIVLVGGAEYYRITNG-----------------LDLEDKLH 110
+P +V FAVIA E+ L+G E+YR NG D D L+
Sbjct: 124 -VPWGIVSNPLPLFAVIAVEVGLMGAVEFYR-RNGSGPAGYSPGIGKFDSSVFDGLDPLY 181
Query: 111 PGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
PGGPFDPLGLA DP+ LKVKEIKNGRLAM ++LGF +Q+YVTGEGP N KH++DP
Sbjct: 182 PGGPFDPLGLADDPEVLQELKVKEIKNGRLAMVSVLGFAVQSYVTGEGPYANWTKHVADP 241
Query: 171 FANNLLTVISGNAERAPTL 189
F NLLTV+ G ER PTL
Sbjct: 242 FGYNLLTVL-GAEERTPTL 259
>gi|384246503|gb|EIE19993.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
Length = 254
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 113/167 (67%), Gaps = 5/167 (2%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S Y+ E+IH+RWA+LG G + PE K+G EAVWFK GA + + LNY G
Sbjct: 79 SRYREIEVIHSRWALLGTLGIVTPELLEKYGGVKFQEAVWFKAGAQIFSADGLNYLGNPS 138
Query: 77 PIN---LVFAVIAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLK 131
++ ++ V +++L+G AE YR+ G ++ D L+PGG FDPLGLA DPD FA LK
Sbjct: 139 LVHAQSIIATVATQVILLGLAEGYRVNGGPAGEITDPLYPGGAFDPLGLADDPDTFAELK 198
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
VKEIKNGRLA FA LGFF+QA VTG+GP++NL HL+DPFA N T+
Sbjct: 199 VKEIKNGRLAQFAALGFFVQAIVTGKGPIQNLEDHLADPFAVNGFTI 245
>gi|145078806|tpg|DAA05885.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Euglena gracilis]
Length = 695
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 12/170 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKF-GANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ ELIH RWAMLGA G +PE N+F G G E +WFK GA + LNYFG+
Sbjct: 514 YREAELIHGRWAMLGAVGCFLPEYLNRFFGVQFG-EPIWFKAGAQIFSAEGLNYFGQPAL 572
Query: 78 INL--VFAVIA-EIVLVGGAEYYRITN------GLDLEDKLHPGGPFDPLGLAKDPDQFA 128
I+ + A++A +++L+G E YR N G DL D+L+PGGPFDPLGLA DPD FA
Sbjct: 573 IHAKSLLAILATQVLLMGAVEAYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFA 631
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
LKVKEIKNGRLAM AMLGF+ QA VTGEGPVEN HL DP A+N LT
Sbjct: 632 ELKVKEIKNGRLAMMAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTA 681
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 12/170 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKF-GANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ ELIH RWAMLGA G +PE N+F G G E +WFK GA + LNYFG+
Sbjct: 30 YREAELIHGRWAMLGAVGCFLPEYLNRFFGVQFG-EPIWFKAGAQIFSAEGLNYFGQPAL 88
Query: 78 INL--VFAVIA-EIVLVGGAEYYRITN------GLDLEDKLHPGGPFDPLGLAKDPDQFA 128
I+ + A++A +++L+G E YR N G DL D+L+PGGPFDPLGLA DPD FA
Sbjct: 89 IHAKSLLAILATQVLLMGAVEAYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFA 147
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
LKVKEIKNGRLAM AMLGF+ QA VTGEGPVEN HL DP A+N LT
Sbjct: 148 ELKVKEIKNGRLAMVAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTA 197
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 108/166 (65%), Gaps = 9/166 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAMLGA G + PE ++ E VWFK GA + L+Y G +
Sbjct: 271 YREAELIHGRWAMLGALGVVFPEYLSRNFDIPIAEPVWFKAGAQIFSEGGLDYLGDARLV 330
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGL-----DLEDKLHPGGPFDPLGLAKDPDQFALL 130
+ ++ + +++L+G AE YR NGL DL D L+PGGPFDPLGLA DPD A L
Sbjct: 331 HAQSILLILGTQVLLMGAAEAYRTGNGLGNFGKDL-DSLYPGGPFDPLGLANDPDTLAEL 389
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
KVKEIKNGRLAMFAM GF++QA VTGE P+ENL+ HL+ PF N L
Sbjct: 390 KVKEIKNGRLAMFAMFGFYVQAIVTGESPLENLSAHLASPFTVNGL 435
>gi|333691283|gb|AEF79974.1| chloroplast minor chlorophyll a-b binding protein of photosystem II
[Dunaliella salina]
Length = 283
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 120/192 (62%), Gaps = 23/192 (11%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI-- 76
Y+A EL+HARWAML AAG +IPE GA+ WF+TGA +L+G TLNYF
Sbjct: 94 YRANELLHARWAMLAAAGILIPEGLQANGADI-KGGTWFETGAEMLNGGTLNYFAVPFGV 152
Query: 77 ---PINLVFAVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGGPFDP 117
P+ L + EIVL+G E +R+ ++ D D+L+PGGPFDP
Sbjct: 153 VQNPLPLAAVTLIEIVLLGAVEKFRVDGTGPAGFSPGVGKFDSDIFDGLDQLYPGGPFDP 212
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
L LA DP+ FA L+VKE KNGRLAM +L F +Q+YVTGEGP N KH+SDPF NLLT
Sbjct: 213 LNLADDPEVFAELQVKETKNGRLAMVGVLAFAIQSYVTGEGPYANFTKHISDPFGYNLLT 272
Query: 178 VISGNAERAPTL 189
V+ G+ +R PTL
Sbjct: 273 VLQGD-DRVPTL 283
>gi|157965839|gb|ABW06956.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 468
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 12/170 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKF-GANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ ELIH RWAMLGA G +PE N+F G G E +WFK GA + LNYFG+
Sbjct: 287 YREAELIHGRWAMLGAVGCFLPEYLNRFFGVQFG-EPIWFKAGAQIFSAEGLNYFGQPAL 345
Query: 78 INL--VFAVIA-EIVLVGGAEYYRITN------GLDLEDKLHPGGPFDPLGLAKDPDQFA 128
I+ + A++A +++L+G E YR N G DL D+L+PGGPFDPLGLA DPD FA
Sbjct: 346 IHAKSLLAILATQVLLMGAVEAYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFA 404
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
LKVKEIKNGRLAM AMLGF+ QA VTGEGPVEN HL DP A+N LT
Sbjct: 405 ELKVKEIKNGRLAMVAMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTA 454
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 108/166 (65%), Gaps = 9/166 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAMLGA G + PE ++ E VWFK GA + L+Y G +
Sbjct: 44 YREAELIHGRWAMLGALGVVFPEYLSRNFDIPIAEPVWFKAGAQIFSEGGLDYLGDARLV 103
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGL-----DLEDKLHPGGPFDPLGLAKDPDQFALL 130
+ ++ + +++L+G AE YR NGL DL D L+PGGPFDPLGLA DPD A L
Sbjct: 104 HAQSILLILGTQVLLMGAAEAYRTGNGLGNFGKDL-DSLYPGGPFDPLGLANDPDTLAEL 162
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
KVKEIKNGRLAMFAM GF++QA VTGE P+ENL+ HL+ PF N L
Sbjct: 163 KVKEIKNGRLAMFAMFGFYVQAIVTGESPLENLSAHLASPFTVNGL 208
>gi|90191871|gb|ABD91647.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
gi|90191875|gb|ABD91649.1| major light-harvesting chlorophyll a/b protein 2.2 [Dunaliella
salina]
Length = 253
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 115/175 (65%), Gaps = 9/175 (5%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT + Y+ ELIHARWA+LGA G + PE +++ E VWFK GA +
Sbjct: 69 LSADPQTFAR--YREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAA 126
Query: 67 NTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNG----LDLEDKLHPGGPFDPLG 119
LNY G I+ ++ + ++VL+G AE YR G LD D L+PGGPFDPLG
Sbjct: 127 GGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLG 186
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LA DPD FA LKVKEIKNGRLAMF+ LGFF+QA VTG+GPV+NL HL+DP NN
Sbjct: 187 LADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNN 241
>gi|125620170|gb|ABN46977.1| chlorophyll a/b-binding protein [Nelumbo nucifera]
Length = 269
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 111/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---N 79
E+IHARWAMLG G I+PE + G G EAVWFK G+ + LNY G I N
Sbjct: 101 EVIHARWAMLGTVGCIVPELLERNGVKIG-EAVWFKAGSQIFRDEGLNYLGDPKLIHAQN 159
Query: 80 LVFAVIAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
++ + A+++L+G E YRI+ G + D L+PGG FDPL LA DP++FA+LKVKEIKN
Sbjct: 160 ILAVLAAQVILMGAIEGYRISGGPLGEPTDPLYPGGNFDPLHLADDPEEFAILKVKEIKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMFAMLGF++QA VTG+GP+ENL HL+DPF NN
Sbjct: 220 GRLAMFAMLGFYVQAIVTGKGPLENLYDHLADPFKNN 256
>gi|90191869|gb|ABD91646.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
gi|90191873|gb|ABD91648.1| major light-harvesting chlorophyll a/b protein 2.1 [Dunaliella
salina]
Length = 253
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 115/175 (65%), Gaps = 9/175 (5%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT + Y+ ELIHARWA+LGA G + PE +++ E VWFK GA +
Sbjct: 69 LSADPQTFAR--YREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAD 126
Query: 67 NTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNG----LDLEDKLHPGGPFDPLG 119
LNY G I+ ++ + ++VL+G AE YR G LD D L+PGGPFDPLG
Sbjct: 127 GGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLG 186
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LA DPD FA LKVKEIKNGRLAMF+ LGFF+QA VTG+GPV+NL HL+DP NN
Sbjct: 187 LADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNN 241
>gi|157965837|gb|ABW06955.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 613
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PEA K G E VWFK GA + L+Y G + +
Sbjct: 185 YREAELIHARWAMLGALGVVFPEALAKAGVPLA-EPVWFKAGAQIFSEGGLDYLGNSNLV 243
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A ++VL+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVK
Sbjct: 244 HAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVK 303
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
E+KNGRLAMFAM GF++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 304 ELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAV 349
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PEA K G E VWFK GA + L+Y G + +
Sbjct: 425 YREAELIHARWAMLGALGVVFPEALAKAGVPLA-EPVWFKAGAQIFSEGGLDYLGNSNLV 483
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A ++VL+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVK
Sbjct: 484 HAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVK 543
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
E+KNGRLAMFAM GF++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 544 ELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAV 589
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A ++VL+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 8 ILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKN 67
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
GRLAMFAM GF++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 68 GRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAV 109
>gi|145078830|tpg|DAA05886.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Euglena gracilis]
Length = 825
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PEA K G E VWFK GA + L+Y G + +
Sbjct: 168 YREAELIHARWAMLGALGVVFPEALAKAGVPLA-EPVWFKAGAQIFSEGGLDYLGNSNLV 226
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A ++VL+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVK
Sbjct: 227 HAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVK 286
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
E+KNGRLAMFAM GF++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 287 ELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAV 332
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PEA K G E VWFK GA + L+Y G + +
Sbjct: 408 YREAELIHARWAMLGALGVVFPEALAKAGVPLA-EPVWFKAGAQIFSEGGLDYLGNSNLV 466
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A ++VL+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVK
Sbjct: 467 HAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVK 526
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
E+KNGRLAMFAM GF++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 527 ELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAV 572
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PEA K G E VWFK GA + L+Y G + +
Sbjct: 648 YREAELIHARWAMLGALGVVFPEALAKAGVPLA-EPVWFKAGAQIFSEGGLDYLGNSNLV 706
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A ++VL+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVK
Sbjct: 707 HAQSILAILAFQVVLMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVK 766
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
E+KNGRLAMFAM GF++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 767 ELKNGRLAMFAMFGFYVQALVTGEGPVENWAAHVADPFNVNGLTAV 812
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Query: 90 LVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 147
L+G AE YR+ G + D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMFAM G
Sbjct: 1 LMGLAEAYRVNGGPLGEDSDALYPGGAFDPLGLADDPETFAELKVKELKNGRLAMFAMFG 60
Query: 148 FFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
F++QA VTGEGPVEN A H++DPF N LT +
Sbjct: 61 FYVQALVTGEGPVENWAAHVADPFNVNGLTAV 92
>gi|115829|sp|P27517.1|CB2_DUNTE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167985|gb|AAA62772.1| 28.5 kDa LHCII apoprotein [Dunaliella tertiolecta]
Length = 253
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 114/175 (65%), Gaps = 9/175 (5%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT + Y+ ELIHARWA+LGA G + PE +++ E VWFK GA +
Sbjct: 69 LSADPQTFAR--YREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFAD 126
Query: 67 NTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNG----LDLEDKLHPGGPFDPLG 119
LNY G I+ ++ + ++VL+G AE YR G LD D L+PGGPFDPLG
Sbjct: 127 GGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLG 186
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LA DPD FA LKVKEIKNGRLAMF+ LGFF+QA VTG+GPV+NL HL+DP N
Sbjct: 187 LADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNK 241
>gi|302835026|ref|XP_002949075.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
gi|300265820|gb|EFJ50010.1| hypothetical protein VOLCADRAFT_80470 [Volvox carteri f.
nagariensis]
Length = 252
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + LNY G
Sbjct: 80 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNE--- 136
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 137 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 196
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL++P A N
Sbjct: 197 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 240
>gi|302840162|ref|XP_002951637.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
gi|300263246|gb|EFJ47448.1| hypothetical protein VOLCADRAFT_109135 [Volvox carteri f.
nagariensis]
Length = 251
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + LNY G
Sbjct: 79 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNE--- 135
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 136 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 195
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL++P A N
Sbjct: 196 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 239
>gi|302842165|ref|XP_002952626.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
gi|300261970|gb|EFJ46179.1| hypothetical protein VOLCADRAFT_81918 [Volvox carteri f.
nagariensis]
Length = 251
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + LNY G
Sbjct: 79 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNE--- 135
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 136 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 195
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL++P A N
Sbjct: 196 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 239
>gi|168025870|ref|XP_001765456.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683306|gb|EDQ69717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 99 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G D+ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 158 ILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 254
>gi|302842321|ref|XP_002952704.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
gi|300262048|gb|EFJ46257.1| light-harvesting chlorophyll a/b-binding protein [Volvox carteri f.
nagariensis]
Length = 251
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + LNY G
Sbjct: 79 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNE--- 135
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 136 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 195
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL++P A N
Sbjct: 196 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 239
>gi|193875800|gb|ACF24536.1| light harvesting complex protein LHCII-1 [Gymnochlora stellata]
Length = 335
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 73
T+ + Y+ E+IHARWAMLGA G + PE +K+ E VWFK G+ + L+Y G
Sbjct: 153 TTFAAYRETEVIHARWAMLGALGCVTPELLSKYSGVPIAEPVWFKAGSQIFAEGGLDYLG 212
Query: 74 KN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFA 128
I + A++A ++VL+GGAE YR+ G E D ++PGG FDPLGLA DPD FA
Sbjct: 213 NPSLIHAQSILAILACQVVLMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFA 272
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
LKVKEIKNGRLAMF+MLGF++QA TG+GPVEN A+H++DP N L
Sbjct: 273 ELKVKEIKNGRLAMFSMLGFYVQAIATGKGPVENWAEHIADPSGVNGL 320
>gi|302849646|ref|XP_002956352.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
gi|300258258|gb|EFJ42496.1| hypothetical protein VOLCADRAFT_77072 [Volvox carteri f.
nagariensis]
Length = 250
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + LNY G
Sbjct: 78 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNE--- 134
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 135 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 194
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL++P A N
Sbjct: 195 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 238
>gi|168043963|ref|XP_001774452.1| predicted protein [Physcomitrella patens subsp. patens]
gi|4757371|dbj|BAA77273.1| chlorophyll a/b-binding protein precursor [Physcomitrella patens]
gi|162674164|gb|EDQ60676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 101 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 159
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G D+ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 160 ILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 220 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 256
>gi|168003213|ref|XP_001754307.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694409|gb|EDQ80757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCVTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G D+ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|168006129|ref|XP_001755762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693081|gb|EDQ79435.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHARWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G D+ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWASQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 253
>gi|168009155|ref|XP_001757271.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691394|gb|EDQ77756.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWASQVVLMGAVEGYRVAGGPLGEITDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 253
>gi|32307464|gb|AAP79137.1| chlorophyll a/b-binding protein II 1 [Bigelowiella natans]
Length = 346
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 73
T+ + Y+ E+IHARWAMLG G + PE K+ E VWFK G+ + L+Y G
Sbjct: 169 TTFAAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLG 228
Query: 74 KN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFA 128
+ + A++A +++L+GGAE YR+ G E D ++PGG FDPLGLA DPD FA
Sbjct: 229 NPSLVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFA 288
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
LKVKEIKNGRLAMF+MLGF++QA TG+GPVEN A+H++DP N LT+ +
Sbjct: 289 ELKVKEIKNGRLAMFSMLGFYVQAISTGKGPVENWAEHIADPSGVNGLTLAT 340
>gi|8925554|gb|AAF81518.1|AF268320_1 light-harvesting complex protein LHCG11 [Bigelowiella natans]
gi|145078995|tpg|DAA05892.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Bigelowiella natans]
Length = 333
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 5/164 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ E+IHARWAMLGA G + PE K+ E VWFK G+ + L+Y G +
Sbjct: 161 YRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLV 220
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A +++L+GGAE YR+ G E D ++PGG FDPLGLA DPD FA LKVK
Sbjct: 221 HAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVK 280
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
EIKNGRLAMF+MLGF++QA TG+GPVEN A+H++DP N LT
Sbjct: 281 EIKNGRLAMFSMLGFYVQAIATGKGPVENWAEHIADPAGVNGLT 324
>gi|3928891|gb|AAC79711.1| chlorophyll a/b binding protein [Acetabularia acetabulum]
Length = 251
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K+G E+VWF+ GA + L+Y G I
Sbjct: 79 YRETELIHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALI 138
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ + VI++++L+G E YR+ G E D L+PG FDPLGLA DPD FA LK+K
Sbjct: 139 HAQSIGAIVISQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIK 198
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
EIKNGRLAMF+M GF++QA VTG+GPVEN A+H++DPF N +
Sbjct: 199 EIKNGRLAMFSMFGFYVQAIVTGKGPVENWAEHIADPFTANAFS 242
>gi|168003066|ref|XP_001754234.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529314|dbj|BAD08518.1| light-harvesting chlorophyll a/b-binding protein 1 [Physcomitrella
patens subsp. patens]
gi|162694788|gb|EDQ81135.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G D+ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWACQVILMGAVEGYRVAGGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|8925556|gb|AAF81519.1|AF268321_1 light-harvesting complex protein LHCG12 [Bigelowiella natans]
gi|145079012|tpg|DAA05893.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Bigelowiella natans]
Length = 346
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 5/164 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ E+IHARWAMLGA G + PE K+ E VWFK G+ + L+Y G +
Sbjct: 174 YRETEVIHARWAMLGALGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLGNPSLV 233
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A +++L+GGAE YR+ G E D ++PGG FDPLGLA DPD FA LKVK
Sbjct: 234 HAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFAELKVK 293
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
EIKNGRLAMF+MLGF++QA TG+GPVEN A+H++DP N LT
Sbjct: 294 EIKNGRLAMFSMLGFYVQAIATGKGPVENWAEHIADPAGVNGLT 337
>gi|168019112|ref|XP_001762089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686806|gb|EDQ73193.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHARWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 155 ILAIWASQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANN 251
>gi|145079419|tpg|DAA05914.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Acetabularia acetabulum]
Length = 248
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K+G E+VWF+ GA + L+Y G I
Sbjct: 76 YRETELIHARWAMLGALGCVTPEILAKYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALI 135
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ + VI++++L+G E YR+ G E D L+PG FDPLGLA DPD FA LK+K
Sbjct: 136 HAQSIGAIVISQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIK 195
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
EIKNGRLAMF+M GF++QA VTG+GPVEN A+H++DPF N +
Sbjct: 196 EIKNGRLAMFSMFGFYVQAIVTGKGPVENWAEHVADPFTANAFS 239
>gi|8925552|gb|AAF81517.1|AF268319_1 light-harvesting complex protein LHCG4 [Bigelowiella natans]
gi|145078979|tpg|DAA05891.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Bigelowiella natans]
Length = 345
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 115/172 (66%), Gaps = 5/172 (2%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 73
T+ + Y+ E+IHARWAMLG G + PE K+ E VWFK G+ + L+Y G
Sbjct: 168 TTFAAYRETEVIHARWAMLGTLGCVTPELLAKYSGVPIAEPVWFKAGSQIFAEGGLDYLG 227
Query: 74 KN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFA 128
+ + A++A +++L+GGAE YR+ G E D ++PGG FDPLGLA DPD FA
Sbjct: 228 NPSLVHAQSILAILACQVILMGGAEAYRVNGGPAGEGLDAINPGGAFDPLGLADDPDTFA 287
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
LKVKEIKNGRLAMF+MLGF++QA TG+GPVEN A+H++DP N LT+ +
Sbjct: 288 ELKVKEIKNGRLAMFSMLGFYVQAISTGKGPVENWAEHIADPSGVNGLTLAT 339
>gi|115832|sp|P20866.1|CB2_PHYPA RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169020|gb|AAA33636.1| major chlorophyll binding protein [Physcomitrella patens]
Length = 269
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 101 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 159
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 160 ILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 220 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 256
>gi|302842163|ref|XP_002952625.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
gi|300261969|gb|EFJ46178.1| hypothetical protein VOLCADRAFT_102070 [Volvox carteri f.
nagariensis]
Length = 270
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+ EAVWFK GA + LNY G
Sbjct: 98 YRELELIHARWAMLGALGCVTPELLSKYAGVSFGEAVWFKAGAQIFAEGGLNYLGNE--- 154
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 155 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 214
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL+ HL++P A N
Sbjct: 215 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLANPSAVN 258
>gi|167997439|ref|XP_001751426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066892|ref|XP_001785364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066898|ref|XP_001785367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663036|gb|EDQ49825.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663039|gb|EDQ49828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697407|gb|EDQ83743.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|168018669|ref|XP_001761868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168018837|ref|XP_001761952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686923|gb|EDQ73309.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687007|gb|EDQ73393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|167997791|ref|XP_001751602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697583|gb|EDQ83919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|467794|emb|CAA47950.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP +NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNN 262
>gi|167997305|ref|XP_001751359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697340|gb|EDQ83676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|168044688|ref|XP_001774812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|41529316|dbj|BAD08519.1| light-harvesting chlorophyll a/b-binding protein 2 [Physcomitrella
patens subsp. patens]
gi|162673836|gb|EDQ60353.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 267
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHARWAMLGALGCVTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 159 ILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 255
>gi|14041685|emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP +NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVSNN 262
>gi|168053792|ref|XP_001779318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669234|gb|EDQ55825.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHARWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 155 ILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 251
>gi|145079054|tpg|DAA05896.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm13 [Acetabularia acetabulum]
Length = 255
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 110/161 (68%), Gaps = 5/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PE +K+G E+VWFK G+ + L+Y G +
Sbjct: 82 YRELELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNANLV 141
Query: 77 PINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LK+K
Sbjct: 142 HAQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+EN A+H++DPF+ N
Sbjct: 202 EIKNGRLAMFSMFGFFVQAVVTGKGPIENWAEHVADPFSVN 242
>gi|19423285|gb|AAL88456.1|AF479777_1 major light-harvesting complex II protein m10 [Chlamydomonas
reinhardtii]
Length = 256
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + L+Y G +
Sbjct: 85 YRELELIHARWAMLGALGCITPELLAKSGTQFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 143
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 144 HAQNIVATLAVQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 203
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL HLS+P NN
Sbjct: 204 EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNN 244
>gi|298573438|gb|ADI88502.1| protoporphyrin IX magnesium chelatase [Pteris vittata]
Length = 266
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
ELIHARWAMLGA G + PE K G G EAVWFK G+ + L+Y G +
Sbjct: 99 ELIHARWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ED L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWAFQVVLMGAVEGYRVAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPTVNN 254
>gi|87313225|gb|ABD37909.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Chlamydomonas incerta]
Length = 249
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 111/161 (68%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE +G G EAVWFK GA + L+Y G + +
Sbjct: 79 YRELELIHARWAMLGALGCIFPELLGSYGVPFG-EAVWFKAGAQIFQEGGLDYLGNSNLV 137
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ +++L+G E YR+ G E DKL+PGG FDPLGLA DPD F+ LKVK
Sbjct: 138 HAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFSELKVK 197
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL+ HL++P NN
Sbjct: 198 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNN 238
>gi|20269804|gb|AAM18057.1|AF495473_1 major light-harvesting complex II protein m1 [Chlamydomonas
reinhardtii]
gi|15430558|dbj|BAB64414.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|15430566|dbj|BAB64418.1| light-harvesting chlorophyll-a/b binding protein LhcII-4
[Chlamydomonas reinhardtii]
gi|27542565|gb|AAO16493.1| light-harvesting complex II protein [Chlamydomonas reinhardtii]
Length = 256
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 110/161 (68%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE +G G EAVWFK GA + L+Y G +
Sbjct: 86 YRELELIHARWAMLGALGCIFPELLGSYGVPFG-EAVWFKAGAQIFQEGGLDYLGNPNLV 144
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ +++L+G E YR+ G E DKL+PGG FDPLGLA DPD FA LKVK
Sbjct: 145 HAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVK 204
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL+ HL++P NN
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGTNN 245
>gi|159491492|ref|XP_001703699.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
gi|15430554|dbj|BAB64412.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|15430562|dbj|BAB64416.1| light-harvesting chlorophyll-a/b binding protein LhcII-1.3
[Chlamydomonas reinhardtii]
gi|158270548|gb|EDO96390.1| light-harvesting complex II chlorophyll a-b binding protein M3
[Chlamydomonas reinhardtii]
Length = 257
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + L+Y G +
Sbjct: 86 YRELELIHARWAMLGALGCITPELLAKSGTQFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 144
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 145 HAQNIVATLAVQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 204
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL HLS+P NN
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNN 245
>gi|145079101|tpg|DAA05898.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Acetabularia acetabulum]
Length = 198
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 110/164 (67%), Gaps = 5/164 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE ++G E+VWF+ GA + L+Y G I
Sbjct: 26 YRETELIHARWAMLGALGCVTPEILARYGGTSFGESVWFRAGAQIFKDGGLDYLGSPALI 85
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ + VI++++L+G E YR+ G E D L+PG FDPLGLA DPD FA LK+K
Sbjct: 86 HAQSIGAIVISQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKIK 145
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
EIKNGRLAMF+M GF++QA VTG+GPVEN A+H++DPF N +
Sbjct: 146 EIKNGRLAMFSMFGFYVQAIVTGKGPVENWAEHVADPFTANAFS 189
>gi|87313211|gb|ABD37902.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Acutodesmus obliquus]
Length = 250
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + LNY G + I
Sbjct: 85 YRELELIHARWAMLGALGCITPELLAKNGVPFG-EAVWFKAGAQIFQEGGLNYLGNSSLI 143
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A +A +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 144 HAQSILATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVK 203
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ NL HLSDP NN
Sbjct: 204 EIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPSGNN 244
>gi|115798|sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
Precursor
gi|20479|emb|CAA26213.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE F + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|3928140|emb|CAA10284.1| chlorophyll a/b binding protein [Cicer arietinum]
Length = 266
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 254
>gi|556367|gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
Length = 267
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 159 ILAIWATQVILMGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>gi|607152|emb|CAA57409.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-2 [Picea
abies]
Length = 275
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 108 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 166
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 167 ILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKN 226
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 227 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNN 263
>gi|607150|emb|CAA57408.1| light harvesting chlorophyll a /b-binding protein Lhcb1*2-1 [Picea
abies]
Length = 274
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNN 262
>gi|224083006|ref|XP_002306927.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118487931|gb|ABK95787.1| unknown [Populus trichocarpa]
gi|118489514|gb|ABK96559.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489848|gb|ABK96723.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489863|gb|ABK96730.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222856376|gb|EEE93923.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 252
>gi|224085884|ref|XP_002307725.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|118485884|gb|ABK94788.1| unknown [Populus trichocarpa]
gi|222857174|gb|EEE94721.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 252
>gi|302840684|ref|XP_002951894.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
gi|300262795|gb|EFJ46999.1| hypothetical protein VOLCADRAFT_81675 [Volvox carteri f.
nagariensis]
Length = 255
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 84 YRELELIHARWAMLGALGCVTPELLSKNGVQFG-EAVWFKAGAQIFQEGGLDYLGNPSLV 142
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 143 HAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 202
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL++P NN
Sbjct: 203 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNN 243
>gi|87313209|gb|ABD37901.1| light-harvesting chlorophyll-a/b binding protein LhcbM4
[Acutodesmus obliquus]
Length = 255
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + LNY G + I
Sbjct: 84 YRELELIHARWAMLGALGCITPELLAKNGVPFG-EAVWFKAGAQIFQEGGLNYLGNSSLI 142
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A +A +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 143 HAQSILATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVK 202
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ NL HLSDP NN
Sbjct: 203 EIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPSGNN 243
>gi|168045248|ref|XP_001775090.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168045296|ref|XP_001775114.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673541|gb|EDQ60062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673565|gb|EDQ60086.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 263
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 155 ILAIWACQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANN 251
>gi|302833824|ref|XP_002948475.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
gi|300266162|gb|EFJ50350.1| hypothetical protein VOLCADRAFT_73821 [Volvox carteri f.
nagariensis]
Length = 257
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 110/161 (68%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE +G G E+VWFK GA + L+Y G +
Sbjct: 86 YRELELIHARWAMLGALGCIFPELLGSYGVPFG-ESVWFKAGAQIFQEGGLDYLGNPSLV 144
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ +++L+G E YR+ G E DKL+PGG FDPLGLA DPD FA LKVK
Sbjct: 145 HAQSILAILGTQVILMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVK 204
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL+ HL++P NN
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNLSDHLANPGVNN 245
>gi|349443|gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 103 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLIHAQS 161
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 162 ILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKN 221
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 222 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 258
>gi|74272671|gb|ABA01131.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Chlamydomonas incerta]
Length = 257
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 86 YRELELIHARWAMLGALGCLTPELLAKNGTQFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 144
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 145 HAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 204
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GPV+NL HLS+P NN
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLSNPTVNN 245
>gi|49473448|gb|AAT66413.1| chloroplast light-harvesting complex II, partial [Chlorella
pyrenoidosa]
Length = 179
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 113/177 (63%), Gaps = 13/177 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT + Y+ E+IHARWAMLGA G I PE K G G EAVWFK GA +
Sbjct: 3 LSADPQTFAR--YREIEVIHARWAMLGALGCITPELLAKNGIPFG-EAVWFKAGAQIFQD 59
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL------DLEDKLHPGGPFDP 117
LNY G + + A +A +++L+G AE YR G DL D L+PGG FDP
Sbjct: 60 GGLNYLGNESLVHAQSILATLAVQVLLMGAAESYRANGGAPGGFGEDL-DSLYPGGAFDP 118
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LGLA DPD A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ NL HLSDP NN
Sbjct: 119 LGLADDPDTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPTGNN 175
>gi|2804572|dbj|BAA24493.1| chlorophyll a/b-binding protein [Fagus crenata]
Length = 264
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNN 252
>gi|158523323|gb|ABW70800.1| chloroplast light harvesting chlorophyll a/b binding protein
[Populus euphratica]
Length = 263
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+MLGFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMLGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|87313205|gb|ABD37899.1| light-harvesting chlorophyll-a/b binding protein LhcbM2
[Acutodesmus obliquus]
Length = 249
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 113/177 (63%), Gaps = 13/177 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT + Y+ E+IHARWAMLGA G I PE K G G EAVWFK GA +
Sbjct: 65 LSADPQTFAK--YREIEVIHARWAMLGALGCITPELLAKNGVPFG-EAVWFKAGAQIFQD 121
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL------DLEDKLHPGGPFDP 117
LNY G + + A +A +++L+G AE YR G DL D L+PGG FDP
Sbjct: 122 GGLNYLGNENLVHAQSILATLAVQVLLMGAAESYRANGGAPGGFGEDL-DSLYPGGAFDP 180
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LGLA DPD A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ NL HLSDP NN
Sbjct: 181 LGLADDPDTLAELKVKEIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLSDPSGNN 237
>gi|159474706|ref|XP_001695466.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19423287|gb|AAL88457.1|AF479778_1 major light-harvesting complex II protein m9 [Chlamydomonas
reinhardtii]
gi|158275949|gb|EDP01724.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 106/161 (65%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + LNY G I
Sbjct: 83 YRELELIHARWAMLGALGIVTPELLQKNGVQFG-EAVWFKAGAQIFQEGGLNYLGNPSLI 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLAVQVVLLGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+ GFF+QA VTG+GP++NL HLS+P NN
Sbjct: 202 EIKNGRLAMFSSFGFFVQAIVTGKGPIQNLDDHLSNPGVNN 242
>gi|302851938|ref|XP_002957491.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
gi|300257133|gb|EFJ41385.1| hypothetical protein VOLCADRAFT_84135 [Volvox carteri f.
nagariensis]
Length = 254
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCVTPELLSKNGVQFG-EAVWFKAGAQIFQEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL++P NN
Sbjct: 202 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNN 242
>gi|225446831|ref|XP_002283566.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147799091|emb|CAN74831.1| hypothetical protein VITISV_023674 [Vitis vinifera]
Length = 270
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G +
Sbjct: 103 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 161
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 162 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 221
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 222 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 258
>gi|398599|emb|CAA52750.1| chlorophyll a/b binding protein [Amaranthus hypochondriacus]
Length = 264
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNPNLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 156 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANN 252
>gi|255548299|ref|XP_002515206.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545686|gb|EEF47190.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 267
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|224068679|ref|XP_002302798.1| predicted protein [Populus trichocarpa]
gi|222844524|gb|EEE82071.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|384249593|gb|EIE23074.1| putative chlorophyll a/b-binding protein, chloroplast precursor
[Coccomyxa subellipsoidea C-169]
Length = 210
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 110/162 (67%), Gaps = 7/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE ++ G E VW+K GA +L L+Y GK +
Sbjct: 40 YREIEVIHARWAMLGALGCLTPELLSQNGFTFQ-EPVWWKAGAQILSSEGLDYLGKPNLV 98
Query: 79 N---LVFAVIAEIVLVGGAEYYRITN---GLDLEDKLHPGGPFDPLGLAKDPDQFALLKV 132
+ +V + +++L+G AE YR G+D DKL+PGGPFDPL A DPD A LKV
Sbjct: 99 HAQSIVATLAVQVILMGSAEAYRAAGSAPGVDGLDKLYPGGPFDPLEFASDPDTLAELKV 158
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL+ P+ANN
Sbjct: 159 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLASPYANN 200
>gi|56809379|gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
sativum]
Length = 266
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 254
>gi|159471686|ref|XP_001693987.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
gi|15430556|dbj|BAB64413.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|15430564|dbj|BAB64417.1| light-harvesting chlorophyll-a/b binding protein LhcII-3
[Chlamydomonas reinhardtii]
gi|158277154|gb|EDP02923.1| light-harvesting protein of photosystem II [Chlamydomonas
reinhardtii]
Length = 249
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + LNY G I
Sbjct: 78 YRELELIHARWAMLGALGCITPELLAKNGIPFG-EAVWFKAGAQIFAEGGLNYLGNENLI 136
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A +A ++V++G AE YR G E D LHPGG FDPLGLA DPD FA LKVK
Sbjct: 137 HAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVK 196
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL HL++P A N
Sbjct: 197 EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 237
>gi|218174|dbj|BAA00537.1| type II light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
Length = 263
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
ELIH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 ELIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVTDPVANN 251
>gi|302832904|ref|XP_002948016.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
gi|300266818|gb|EFJ51004.1| hypothetical protein VOLCADRAFT_79865 [Volvox carteri f.
nagariensis]
Length = 254
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLSKNGVQFG-EAVWFKAGAQIFQEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL++P NN
Sbjct: 202 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNN 242
>gi|225463432|ref|XP_002275075.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
Length = 264
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|302854172|ref|XP_002958596.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
gi|300256057|gb|EFJ40333.1| hypothetical protein VOLCADRAFT_84524 [Volvox carteri f.
nagariensis]
Length = 254
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLSKNGVQFG-EAVWFKAGAQIFQEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL++P NN
Sbjct: 202 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNN 242
>gi|225463428|ref|XP_002274942.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 1 [Vitis vinifera]
gi|359483839|ref|XP_003633024.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic
isoform 2 [Vitis vinifera]
gi|147776663|emb|CAN67709.1| hypothetical protein VITISV_003096 [Vitis vinifera]
Length = 264
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|224114357|ref|XP_002316737.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
gi|222859802|gb|EEE97349.1| light-harvesting complex II protein Lhcb1 [Populus trichocarpa]
Length = 264
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|224284929|gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>gi|147857734|emb|CAN78667.1| hypothetical protein VITISV_031287 [Vitis vinifera]
Length = 264
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|302856312|ref|XP_002959561.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
gi|302856626|ref|XP_002959664.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254677|gb|EFJ39271.1| hypothetical protein VOLCADRAFT_108699 [Volvox carteri f.
nagariensis]
gi|300254888|gb|EFJ39374.1| hypothetical protein VOLCADRAFT_78398 [Volvox carteri f.
nagariensis]
Length = 254
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLSKNGVQFG-EAVWFKAGAQIFQEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL++P NN
Sbjct: 202 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDHLANPAVNN 242
>gi|116778744|gb|ABK20976.1| unknown [Picea sitchensis]
gi|116779697|gb|ABK21395.1| unknown [Picea sitchensis]
gi|116790882|gb|ABK25775.1| unknown [Picea sitchensis]
gi|148908056|gb|ABR17147.1| unknown [Picea sitchensis]
gi|148908517|gb|ABR17370.1| unknown [Picea sitchensis]
gi|224284311|gb|ACN39891.1| unknown [Picea sitchensis]
gi|224284945|gb|ACN40202.1| unknown [Picea sitchensis]
gi|224285575|gb|ACN40506.1| unknown [Picea sitchensis]
gi|224285579|gb|ACN40508.1| unknown [Picea sitchensis]
Length = 274
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>gi|115814|sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCII type I CAB-8; Flags: Precursor
gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein [Pisum sativum]
Length = 268
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 101 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 159
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 160 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 220 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 256
>gi|693916|gb|AAA80591.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|145079118|tpg|DAA05899.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm9 [Acetabularia acetabulum]
Length = 229
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 115/171 (67%), Gaps = 9/171 (5%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKF-GANCGPEAVWFKTGALLLD 65
+SA +T A Y+ ELIHARWAMLGA G + PE K+ G +CG E+VWFK G+ +
Sbjct: 48 LSADPETFKA--YREQELIHARWAMLGALGCVTPEILAKYAGVSCG-ESVWFKAGSQIFQ 104
Query: 66 GNTLNYFGKN--IPINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGL 120
L+Y G + + A++ ++VL+G E YR+ G E D LHPG FDPLGL
Sbjct: 105 EGGLDYLGNPSLVHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGL 164
Query: 121 AKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPF 171
A DPD FA LKVKEIKNGRLAMF+M GF++QA VTG+GP+EN A H++DPF
Sbjct: 165 ADDPDTFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPIENWADHVADPF 215
>gi|73665920|gb|AAZ79657.1| putative chlorophyll a/b-binding protein [Fagus sylvatica]
Length = 260
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 94 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 152
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 153 ILAIWATQVLLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKN 212
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 213 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNN 249
>gi|115817|sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20661|emb|CAA32657.1| unnamed protein product [Pinus sylvestris]
Length = 278
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 170 ILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>gi|217944|dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
[Lactuca sativa]
Length = 266
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 116/173 (67%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 85 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP ANN
Sbjct: 202 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANN 254
>gi|115770|sp|P12328.1|CB21_LEMGI RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|168290|gb|AAA33392.1| chlorophyll a/b apoprotein [Lemna gibba]
Length = 264
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G I PE +K G G EAVWFK GA + L+Y G +
Sbjct: 97 EVIHSRWAMLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
>gi|326523787|dbj|BAJ93064.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 254
>gi|511153|emb|CAA84525.1| chlorophyll a,b binding protein type I [Solanum tuberosum]
Length = 265
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 253
>gi|374095596|gb|AEY85026.1| light-harvesting complex II protein [Cajanus cajan]
Length = 262
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+L+ L+Y G I
Sbjct: 95 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSLIFSEGGLDYLGNPSLIHAQS 153
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 154 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 213
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP +N
Sbjct: 214 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNSN 250
>gi|2765356|emb|CAA74179.1| chlorophyll a/b-binding protein [Beta vulgaris subsp. vulgaris]
Length = 264
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNPNLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DKL+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKLYPGGAFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANN 252
>gi|87313177|gb|ABD37885.1| light-harvesting chlorophyll-a/b binding protein LhcbM1 [Mesostigma
viride]
gi|87313179|gb|ABD37886.1| light-harvesting chlorophyll-a/b binding protein LhcbM2 [Mesostigma
viride]
gi|145079623|tpg|DAA05921.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Mesostigma viride]
Length = 267
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 115/174 (66%), Gaps = 9/174 (5%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKF-GANCGPEAVWFKTGALLLD 65
+SA +T +A Y+ EL+HARWAMLG G +PEA K+ G N G E+VWFK G +
Sbjct: 79 LSADPETFAA--YREIELMHARWAMLGTLGCFLPEALEKYSGINFG-ESVWFKAGGQIFQ 135
Query: 66 GNTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGL 120
L+Y G ++ ++ V + +L+G E YR+ G + DK++PGG FDPLGL
Sbjct: 136 EGGLDYLGNPSLVHAQSIIATVFIQALLMGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGL 195
Query: 121 AKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DPD A LKVKEIKNGRLAMF+M G+F+QA VTG+GPVENL HL+DPF NN
Sbjct: 196 GDDPDTLAELKVKEIKNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPFVNN 249
>gi|115804|sp|P04782.1|CB24_PETSP RecName: Full=Chlorophyll a-b binding protein 25, chloroplastic;
AltName: Full=LHCII type I CAB-25; Short=LHCP; Flags:
Precursor
gi|20483|emb|CAA26211.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE F + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|226502967|ref|NP_001142284.1| uncharacterized protein LOC100274453 [Zea mays]
gi|194708004|gb|ACF88086.1| unknown [Zea mays]
gi|195613594|gb|ACG28627.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|413950532|gb|AFW83181.1| light harvesting chlorophyll a/b binding protein1 isoform 1 [Zea
mays]
gi|413950533|gb|AFW83182.1| light harvesting chlorophyll a/b binding protein1 isoform 2 [Zea
mays]
Length = 264
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPVENLADHLADPVNNN 252
>gi|102139977|gb|ABF70112.1| chlorophyll A-B binding protein (CAB), putative [Musa balbisiana]
Length = 267
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|157786302|gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
Length = 266
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 254
>gi|302767620|ref|XP_002967230.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165221|gb|EFJ31829.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSKNGIKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 155 ILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANN 251
>gi|449459364|ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLTDPVNNN 253
>gi|302754140|ref|XP_002960494.1| light-harvesting complex [Selaginella moellendorffii]
gi|300171433|gb|EFJ38033.1| light-harvesting complex [Selaginella moellendorffii]
Length = 272
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 111/157 (70%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 105 EVIHSRWAMLGALGCVFPELLSKNGIKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQS 163
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 164 ILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKN 223
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP ANN
Sbjct: 224 GRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANN 260
>gi|87313181|gb|ABD37887.1| light-harvesting chlorophyll-a/b binding protein LhcbM3 [Mesostigma
viride]
gi|87313183|gb|ABD37888.1| light-harvesting chlorophyll-a/b binding protein LhcbM5 [Mesostigma
viride]
gi|87313185|gb|ABD37889.1| light-harvesting chlorophyll-a/b binding protein LhcbM4 [Mesostigma
viride]
gi|145079700|tpg|DAA05924.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Mesostigma viride]
gi|145079723|tpg|DAA05925.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm2 [Mesostigma viride]
gi|145079757|tpg|DAA05931.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Mesostigma viride]
Length = 267
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 115/174 (66%), Gaps = 9/174 (5%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKF-GANCGPEAVWFKTGALLLD 65
+SA +T +A Y+ EL+HARWAMLG G +PEA K+ G N G E+VWFK G +
Sbjct: 79 LSADPETFAA--YREIELMHARWAMLGTLGCFLPEALEKYSGINFG-ESVWFKAGGQIFQ 135
Query: 66 GNTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGL 120
L+Y G ++ ++ V + +L+G E YR+ G + DK++PGG FDPLGL
Sbjct: 136 EGGLDYLGNPSLVHAQSIIATVFIQALLMGLVEGYRVGGGPLGEAGDKMYPGGSFDPLGL 195
Query: 121 AKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DPD A LKVKEIKNGRLAMF+M G+F+QA VTG+GPVENL HL+DPF NN
Sbjct: 196 GDDPDTLAELKVKEIKNGRLAMFSMFGYFIQAIVTGKGPVENLDAHLADPFVNN 249
>gi|102139745|gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|2196770|gb|AAB61236.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|510388|emb|CAA43633.1| light harvesting chlorophyll a /b binding protein of PSII [Euglena
gracilis]
Length = 1055
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 112/180 (62%), Gaps = 7/180 (3%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ T+ + Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LN
Sbjct: 632 SDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLN 691
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKD 123
Y G I+ +V ++ + ++G E YR G+ D L+PGGPFDPLGLA D
Sbjct: 692 YLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDSGRELDTLYPGGPFDPLGLAND 751
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
PD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL HL+DP ANN+ + SG A
Sbjct: 752 PDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGFA 811
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 115/185 (62%), Gaps = 7/185 (3%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ T+ + Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LN
Sbjct: 171 SDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLN 230
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL-DLE---DKLHPGGPFDPLGLAKD 123
Y G I+ +V ++ + ++G E YR G+ D D L+PGGPFDPLGLA D
Sbjct: 231 YLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAND 290
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
PD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL HL+DP ANN+ + SG A
Sbjct: 291 PDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGFA 350
Query: 184 ERAPT 188
A T
Sbjct: 351 MFAAT 355
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 109/173 (63%), Gaps = 9/173 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ++IH RWAMLG G PE N++G E VWFK GA + + LNY G+ I
Sbjct: 882 YRVAQVIHGRWAMLGVLGCWFPECINRWGGVPFGEPVWFKAGAQIFSEDGLNYLGQPGLI 941
Query: 79 N---LVFAVIAEIVLVGGAEYYRITN-----GLDLEDKLHPGGPFDPLGLAKDPDQFALL 130
+ +V ++ +VL+G E YR G DL D L+PGGPFDPLGLA DP+ F L
Sbjct: 942 HAQSVVLTFLSTLVLMGAVEAYRSAGSVGDFGADL-DPLYPGGPFDPLGLADDPEAFLEL 1000
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
KVKE+KNGRLAM A+ GFF+Q +TG+GPVEN HL+DPF NN+ + G A
Sbjct: 1001 KVKEVKNGRLAMVAIFGFFVQGILTGKGPVENWVDHLTDPFVNNIFQLTPGFA 1053
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 104/162 (64%), Gaps = 8/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAF-NKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ EL + RWAMLG G + PE N FG PE VWFKTGA +L+G +++Y
Sbjct: 405 YRDAELQNGRWAMLGVLGCLAPEVLSNVFGVPY-PEPVWFKTGATILNGGSIDYLANPKL 463
Query: 78 I---NLVFAVIAEIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLK 131
I NL+ ++ E+V AE +R L +DK +PGG FDPLGL+KDP FA K
Sbjct: 464 IHASNLLLTLVLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAK 523
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
VKE+KNGRLAM AMLG F+QA VTG+ P+ENL+ HL++P N
Sbjct: 524 VKEVKNGRLAMLAMLGLFVQAGVTGQSPLENLSAHLANPGVN 565
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 6/110 (5%)
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-----GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
++V ++ +VL+G E YR G DL D L+PGGPFDPLGLA DP+ F LKVK
Sbjct: 5 SVVLTFLSTLVLMGAVEAYRSAGSVGDFGADL-DPLYPGGPFDPLGLADDPEAFLELKVK 63
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
E+KNGRLAM A+ GF +Q +TG+GPVEN HL+DPF NNL + SG A
Sbjct: 64 EVKNGRLAMVAIFGFSVQGILTGKGPVENWVDHLTDPFENNLFQLTSGFA 113
>gi|115820|sp|P15194.1|CB2B_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1B,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1B; Short=CAB; AltName: Full=LHCP;
Flags: Precursor
gi|20665|emb|CAA32658.1| unnamed protein product [Pinus sylvestris]
Length = 274
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 262
>gi|302584050|gb|ADL57411.1| chloroplast LHCII type I chlorophyll a-b binding precursor protein
[Ipomoea nil]
Length = 179
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 113/168 (67%), Gaps = 6/168 (3%)
Query: 12 QTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNY 71
T + + + E+IH+RWAMLGA G + PE ++ G G EAVWFK GA + L+Y
Sbjct: 1 DTETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDY 59
Query: 72 FGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQ 126
G I + A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+
Sbjct: 60 LGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPLYPGGSFDPLGLADDPEA 119
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 120 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 167
>gi|31753114|gb|AAH53854.1| Unknown (protein for IMAGE:5194336), partial [Homo sapiens]
gi|111494016|gb|AAI11385.1| Unknown (protein for IMAGE:5198300), partial [Homo sapiens]
Length = 287
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 120 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 178
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 179 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 238
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 239 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 275
>gi|373882292|gb|AEY78525.1| chlorophyll a/b-binding protein [Tagetes erecta]
Length = 265
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPEVLSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HLSDP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLSDPVANN 253
>gi|379069812|gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 265
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWAVQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|145079335|tpg|DAA05910.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm6 [Acetabularia acetabulum]
Length = 244
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 115/173 (66%), Gaps = 7/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T A Y+ ELIHARWAMLGA G + PE +K+ E+VWFK G+ +
Sbjct: 63 LSADPETFKA--YREQELIHARWAMLGALGCVTPEILSKYAGVSFGESVWFKAGSQIFQE 120
Query: 67 NTLNYFGKN--IPINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G + + A++ ++VL+G E YR+ G E D LHPG FDPLGLA
Sbjct: 121 GGLDYLGNPSLVHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLA 180
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DPD FA LKVKEIKNGRLAMF+M GF++QA VTG+GP+EN A+H++DPF+ N
Sbjct: 181 DDPDTFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPIENWAEHVADPFSVN 233
>gi|413968458|gb|AFW90566.1| chlorophyll a/b-binding protein [Solanum tuberosum]
Length = 271
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>gi|374412428|gb|AEZ49172.1| chlorophyll a/b binding protein of LHCII type I [Wolffia
australiana]
Length = 264
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G I PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHARWAMLGALGCIFPELLSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWATQVVLMGFIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANN 252
>gi|115478691|ref|NP_001062939.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|82654917|sp|P12330.2|CB21_ORYSJ RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|50252362|dbj|BAD28469.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|50252884|dbj|BAD29115.1| putative chlorophyll a-b binding protein, chloroplast precursor
(LHCII type I CAB) (LHCP) [Oryza sativa Japonica Group]
gi|113631172|dbj|BAF24853.1| Os09g0346500 [Oryza sativa Japonica Group]
gi|215737437|dbj|BAG96567.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737443|dbj|BAG96573.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737483|dbj|BAG96613.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765877|dbj|BAG87574.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201978|gb|EEC84405.1| hypothetical protein OsI_30987 [Oryza sativa Indica Group]
Length = 265
Score = 162 bits (409), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|357159913|ref|XP_003578597.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 6 [Brachypodium distachyon]
Length = 264
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 252
>gi|688315|gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 226 GRLAMFSMFGFFVQAIVTGKGPIENLTDHLADPVNNN 262
>gi|357159898|ref|XP_003578592.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357159901|ref|XP_003578593.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357159904|ref|XP_003578594.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357159907|ref|XP_003578595.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357159910|ref|XP_003578596.1| PREDICTED: chlorophyll a-b binding protein 2, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 265
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 253
>gi|224927|prf||1204205B protein 1B,chlorophyll binding
Length = 265
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSQGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|388503040|gb|AFK39586.1| unknown [Medicago truncatula]
Length = 265
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G E D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 157 ILAIWAVQVILMGAVEGYRIAGGPPGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 253
>gi|356559635|ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
[Glycine max]
Length = 264
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|87313227|gb|ABD37910.1| light-harvesting chlorophyll-a/b binding protein LhcbM2a
[Chlamydomonas incerta]
Length = 246
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 110/164 (67%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G I PE K G G EAVWFK G+ + LNY G
Sbjct: 75 YRELELIHARWAMLGALGCITPELLAKNGIPFG-EAVWFKAGSQIFAEGGLNYLGNE--- 130
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 131 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 190
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP++NL HL++P A N
Sbjct: 191 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 234
>gi|2196772|gb|AAB61237.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVILMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|225447576|ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
[Vitis vinifera]
gi|147794485|emb|CAN71610.1| hypothetical protein VITISV_000630 [Vitis vinifera]
Length = 265
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLVDHLADPVANN 253
>gi|159471942|ref|XP_001694115.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|12658406|gb|AAK01125.1|AF330793_1 light-harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158277282|gb|EDP03051.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 249
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 108/161 (67%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + LNY G I
Sbjct: 78 YRELELIHARWAMLGALGCITPELLAKNGIPFG-EAVWFKAGAQIFAEGGLNYLGNENLI 136
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A +A ++V++G AE YR G E D LHPGG FDPLGLA DPD FA LKVK
Sbjct: 137 HAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAELKVK 196
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP++NL HL++P A N
Sbjct: 197 EIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 237
>gi|145079356|tpg|DAA05911.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm5 [Acetabularia acetabulum]
Length = 244
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 115/173 (66%), Gaps = 7/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T A Y+ ELIHARWAMLGA G + PE +K+ E+VWFK G+ +
Sbjct: 63 LSADPETFKA--YREQELIHARWAMLGALGCVTPEILSKYAGVSFGESVWFKAGSQIFQE 120
Query: 67 NTLNYFGKN--IPINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G + + A++ ++VL+G E YR+ G E D LHPG FDPLGLA
Sbjct: 121 GGLDYLGNPSLVHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDVLHPGEKFDPLGLA 180
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DPD FA LKVKEIKNGRLAMF+M GF++QA VTG+GP+EN A+H++DPF+ N
Sbjct: 181 DDPDTFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPIENWAEHVADPFSVN 233
>gi|302566696|gb|ADL41158.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Triticum aestivum]
Length = 266
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNN 254
>gi|115799|sp|P15195.1|CB23_POLMU RecName: Full=Chlorophyll a-b binding protein type 1 member F3,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type I F3; Short=CAB-F3; AltName: Full=LHCP;
Flags: Precursor
gi|169440|gb|AAA68425.1| chlorophyll a/b-binding protein F3 [Polystichum munitum]
Length = 265
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ED ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253
>gi|340002459|gb|AEK26372.1| chloroplast photosystem II chlorophyll a/b binding protein [Sedum
alfredii]
Length = 265
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVENLFDHLADPVANN 253
>gi|358248490|ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
max]
gi|506629|gb|AAA50172.1| photosystem II type I chlorophyll a/b-binding protein [Glycine max]
gi|255636158|gb|ACU18421.1| unknown [Glycine max]
Length = 264
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|188572008|gb|ACD64978.1| chloroplast chlorophyll a/b-binding protein [Ophiopogon japonicus]
Length = 264
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ F+ LKVKEIKN
Sbjct: 156 ILAIWASQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFSELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|317454924|gb|ADV19258.1| chlorophyll a/b-binding protein-like protein [Helleborus
orientalis]
Length = 232
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G +
Sbjct: 65 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 123
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ED L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 124 ILAIWATQVILMGAVEGYRIAGGPLGEVEDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 183
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+ A VTG+GP+ENLA HL+DP NN
Sbjct: 184 GRLAMFSMFGFFVXAIVTGKGPLENLADHLADPVNNN 220
>gi|115453971|ref|NP_001050586.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|122246902|sp|Q10HD0.1|CB23_ORYSJ RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|152013384|sp|A2XJ35.1|CB23_ORYSI RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|50839002|gb|AAT81763.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
gi|108709618|gb|ABF97413.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113549057|dbj|BAF12500.1| Os03g0592500 [Oryza sativa Japonica Group]
gi|125544706|gb|EAY90845.1| hypothetical protein OsI_12453 [Oryza sativa Indica Group]
gi|125586998|gb|EAZ27662.1| hypothetical protein OsJ_11611 [Oryza sativa Japonica Group]
gi|385718838|gb|AFI71846.1| chlorophyll a/b binbing protein [Oryza sativa]
Length = 263
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>gi|168296|gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHARWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|237651899|gb|ACR08639.1| chloroplast chlorophyll A/B binding protein [Mangifera indica]
Length = 264
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|3417451|dbj|BAA32346.1| light-harvesting chlorophyll a/b-binding protein of photosystem II
[Cryptomeria japonica]
Length = 266
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHARWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVILMGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GF++QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNN 254
>gi|357148841|ref|XP_003574911.1| PREDICTED: uncharacterized protein LOC100846020 [Brachypodium
distachyon]
Length = 560
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+ E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 90 RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVH 148
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 134
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKE
Sbjct: 149 AQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKE 208
Query: 135 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
IKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 209 IKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 248
>gi|145078711|tpg|DAA05881.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm1 [Euglena gracilis]
Length = 642
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 113/180 (62%), Gaps = 7/180 (3%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ T+ + Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LN
Sbjct: 428 SDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLN 487
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL-DLE---DKLHPGGPFDPLGLAKD 123
Y G I+ +V ++ + ++G E YR G+ D D L+PGGPFDPLGLA D
Sbjct: 488 YLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAND 547
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
PD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL HL+DP ANN+ + SG A
Sbjct: 548 PDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSANNIFSFTSGFA 607
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 93/149 (62%), Gaps = 7/149 (4%)
Query: 47 GANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL 103
G G AVW+K GA + + LNY G I+ +V ++ + ++G E YR G+
Sbjct: 3 GVPFGEGAVWYKAGAQIFSADGLNYLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGV 62
Query: 104 -DLE---DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 159
D D L+PGGPFDPLGLA DPD A LKVKE+KNGRLAM AMLGF++Q VT GP
Sbjct: 63 GDFGRELDTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGP 122
Query: 160 VENLAKHLSDPFANNLLTVISGNAERAPT 188
VENL HL+DP ANN+ + SG A A T
Sbjct: 123 VENLTFHLADPSANNIFSFTSGFAMFAAT 151
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 104/162 (64%), Gaps = 8/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAF-NKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ EL + RWAMLG G + PE N FG PE VWFKTGA +L+G +++Y
Sbjct: 201 YRDAELQNGRWAMLGVLGCLAPEVLSNVFGVPY-PEPVWFKTGATILNGGSIDYLANPKL 259
Query: 78 I---NLVFAVIAEIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLK 131
I NL+ ++ E+V AE +R L +DK +PGG FDPLGL+KDP FA K
Sbjct: 260 IHASNLLLTLVLELVFFFAAETWREAGEGPLGKAQDKSYPGGVFDPLGLSKDPAAFAEAK 319
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
VKE+KNGRLAM AMLG F+QA VTG+ P+ENL+ HL++P N
Sbjct: 320 VKEVKNGRLAMLAMLGLFVQAGVTGQSPLENLSAHLANPGVN 361
>gi|115806|sp|P14279.1|CB25_SOLLC RecName: Full=Chlorophyll a-b binding protein 5, chloroplastic;
AltName: Full=LHCII type I CAB-5; Short=LHCP; Flags:
Precursor
gi|170392|gb|AAA34142.1| chlorophyll a/b-binding protein precursor, partial [Solanum
lycopersicum]
Length = 237
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 70 EVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 128
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 129 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 188
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ H++DP ANN
Sbjct: 189 GRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANN 225
>gi|353167261|gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
Length = 264
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|115819|sp|P07370.1|CB2B_SOLLC RecName: Full=Chlorophyll a-b binding protein 1B, chloroplastic;
AltName: Full=LHCII type I CAB-1B; Short=LHCP; Flags:
Precursor
gi|170402|gb|AAA34147.1| chlorophyll a/b-binding protein Cab-1B [Solanum lycopersicum]
Length = 265
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|115438250|ref|NP_001043493.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|82654918|sp|P12331.2|CB22_ORYSJ RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|53793541|dbj|BAD52990.1| putative a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113533024|dbj|BAF05407.1| Os01g0600900 [Oryza sativa Japonica Group]
gi|125526713|gb|EAY74827.1| hypothetical protein OsI_02717 [Oryza sativa Indica Group]
gi|125605334|gb|EAZ44370.1| hypothetical protein OsJ_28992 [Oryza sativa Japonica Group]
gi|215767332|dbj|BAG99560.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768322|dbj|BAH00551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|385718790|gb|AFI71822.1| chlorophyll a/b-binding protein [Oryza sativa]
Length = 261
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 94 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 152
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 153 ILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 212
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 213 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 249
>gi|115818|sp|P24006.1|CB2A_PYRPY RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type II CAB-1A; Short=LHCP; Flags:
Precursor
gi|218019|dbj|BAA00449.1| light harvesting a/b binding protein [Pyrus pyrifolia var. culta]
Length = 278
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA +KVKEIKN
Sbjct: 170 ILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKVKEIKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 266
>gi|145079233|tpg|DAA05905.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm12 [Acetabularia acetabulum]
Length = 255
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 11/164 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE +K+G E+VWFK G+ + L+Y G
Sbjct: 82 YREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGN---A 138
Query: 79 NLVFA------VIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA L
Sbjct: 139 NLVHAQSILAILGCQVVLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAEL 198
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
K+KEIKNGRLAMF+M GF++QA VTG+GP+EN A+H+++PF+ N
Sbjct: 199 KIKEIKNGRLAMFSMFGFYVQAVVTGKGPIENWAEHVANPFSVN 242
>gi|159474480|ref|XP_001695353.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
gi|158275836|gb|EDP01611.1| chloropyll a-b binding protein of LHCII type I, chloroplast
precursor [Chlamydomonas reinhardtii]
Length = 253
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 82 YRELELIHARWAMLGALGCLTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 140
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 141 HAQNIVATLAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 200
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 201 EIKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 241
>gi|226358409|gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 264
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|3036948|dbj|BAA25392.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|3036955|dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|115805|sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
Precursor
gi|19829|emb|CAA36958.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|3036944|dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 256
>gi|115825|sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
Precursor
gi|224932|prf||1204205G protein 3C,chlorophyll binding
Length = 267
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|157965835|gb|ABW06954.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 545
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 113/180 (62%), Gaps = 7/180 (3%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ T+ + Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LN
Sbjct: 134 SDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLN 193
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL-DLE---DKLHPGGPFDPLGLAKD 123
Y G I+ +V ++ + ++G E YR G+ D D L+PGGPFDPLGLA D
Sbjct: 194 YLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAND 253
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
PD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL HL+DP +NN+ + SG A
Sbjct: 254 PDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGFA 313
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 110/180 (61%), Gaps = 12/180 (6%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ T+ + Y+ E+IHARWAML + PE G G AVW+K GA + + LN
Sbjct: 369 SDPTTLARYREAEVIHARWAML-----VTPELLAGNGVPFGEGAVWYKAGAQIFSADGLN 423
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL-DLE---DKLHPGGPFDPLGLAKD 123
Y G I+ +V ++ + ++G E YR G+ D D L+PGGPFDPLGLA D
Sbjct: 424 YLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAND 483
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
PD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL HL+DP +NN+ + SG A
Sbjct: 484 PDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGFA 543
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 60/77 (77%)
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
D L+PGGPFDPLGLA DPD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL H
Sbjct: 2 DTLYPGGPFDPLGLANDPDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFH 61
Query: 167 LSDPFANNLLTVISGNA 183
L+DP +NN+ + SG A
Sbjct: 62 LADPSSNNIFSFTSGFA 78
>gi|115781|sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
Precursor
gi|19819|emb|CAA36955.1| unnamed protein product [Nicotiana tabacum]
Length = 266
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|302854015|ref|XP_002958519.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
gi|300256166|gb|EFJ40439.1| hypothetical protein VOLCADRAFT_110088 [Volvox carteri f.
nagariensis]
Length = 270
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PE K G E VWFK GA + L+Y G +
Sbjct: 98 YRELELIHARWAMLGALGCVTPELLAKNGTPIA-EPVWFKAGAQIFQEGGLDYLGNPGLV 156
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ A +A +++L+G E +R+ G E DKLHPGGP FDPL LA+DPD FA LKV
Sbjct: 157 HAQSILATLACQVILMGAIEGFRVNGGPAGEGLDKLHPGGPWFDPLALAEDPDAFAELKV 216
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL++P NN
Sbjct: 217 KEIKNGRLAMFSMFGFFVQAIVTGQGPIENLESHLANPGVNN 258
>gi|407970998|ref|NP_001234739.1| chlorophyll a-b binding protein 4, chloroplastic [Solanum
lycopersicum]
gi|115803|sp|P14278.1|CB24_SOLLC RecName: Full=Chlorophyll a-b binding protein 4, chloroplastic;
AltName: Full=LHCII type I CAB-4; Short=LHCP; Flags:
Precursor
gi|170390|gb|AAA34141.1| chlorophyll a/b-binding protein precursor [Solanum lycopersicum]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL+ H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANN 253
>gi|326520097|dbj|BAK03973.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|449527933|ref|XP_004170962.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|357118764|ref|XP_003561119.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357118766|ref|XP_003561120.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357118768|ref|XP_003561121.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
ELIH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 ELIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|449455992|ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
gi|449525484|ref|XP_004169747.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 159 ILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|414881719|tpg|DAA58850.1| TPA: chlorophyll a-b binding protein 48, Precursor [Zea mays]
Length = 264
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNN 252
>gi|115811|sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
Precursor
gi|20512|emb|CAA28639.1| chlorophyll a/b binding protein [Petunia x hybrida]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAV-IAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANN 253
>gi|326496044|dbj|BAJ90643.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503592|dbj|BAJ86302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|104763696|gb|ABF74606.1| chloroplast chlorophyll a/b-binding protein [Agave tequilana]
Length = 186
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 19 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 77
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 78 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 137
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 138 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 174
>gi|237510764|gb|ACQ99368.1| chloroplast light-harvesting chlorophyll-a/b binding protein
[Ankistrodesmus convolutus]
Length = 248
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 108/164 (65%), Gaps = 8/164 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G ++PE K G VWFK GA + + LNY G I
Sbjct: 74 YREIELIHARWAMLGALGCVVPELLAKNGTPLPDGGVWFKAGAAIFADDGLNYLGNPNLI 133
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNG-----LDLEDKLHPGGPFDPLGLAKDPDQFALL 130
+ A +A ++V++G AE +R G L+ D+L+PG FDP+GLA+DPD FA L
Sbjct: 134 HAQSILATLAFQVVVMGAAESFRFNGGAPGGFLEGNDRLYPGDQFDPMGLAEDPDTFAEL 193
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP+ NL HL+DP NN
Sbjct: 194 KVKEIKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLADPSVNN 237
>gi|145078761|tpg|DAA05883.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Euglena gracilis]
Length = 367
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 113/180 (62%), Gaps = 7/180 (3%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ T+ + Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LN
Sbjct: 82 SDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLN 141
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGL-DLE---DKLHPGGPFDPLGLAKD 123
Y G I+ +V ++ + ++G E YR G+ D D L+PGGPFDPLGLA D
Sbjct: 142 YLGNPSLIHAQSVVLTFLSTLAIMGAVEAYRYGGGVGDFGRELDTLYPGGPFDPLGLAND 201
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
PD A LKVKE+KNGRLAM AMLGF++Q VT GPVENL HL+DP +NN+ + SG A
Sbjct: 202 PDALAELKVKELKNGRLAMVAMLGFYVQPLVTKAGPVENLTFHLADPSSNNIFSFTSGFA 261
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGA 61
+ T+ + Y+ E+IHARWAMLGA G + PE G G AVW+K GA
Sbjct: 317 SDPTTLARYREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGA 367
>gi|87313231|gb|ABD37913.1| light-harvesting chlorophyll-a/b binding protein LhcbM8
[Chlamydomonas incerta]
Length = 245
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + LNY G I
Sbjct: 74 YRELELIHARWAMLGALGIVTPELLAKNGVPFG-EAVWFKAGAQIFQEGGLNYLGNPSLI 132
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 133 HAQNIVATLAVQVILLGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 192
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+ GFF+QA VTG+GP++NL HLS+P NN
Sbjct: 193 EIKNGRLAMFSSFGFFVQAIVTGKGPIQNLDDHLSNPGVNN 233
>gi|449433646|ref|XP_004134608.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|3293555|gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|159474462|ref|XP_001695344.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
gi|158275827|gb|EDP01602.1| chloropyll a-b binding protein of LHCII [Chlamydomonas reinhardtii]
Length = 254
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLAKNGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 202 EIKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 242
>gi|159474708|ref|XP_001695467.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158275950|gb|EDP01725.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 254
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 202 EIKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPGVNN 242
>gi|449433636|ref|XP_004134603.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 1 [Cucumis sativus]
gi|449433638|ref|XP_004134604.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 2 [Cucumis sativus]
gi|449433640|ref|XP_004134605.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like isoform 3 [Cucumis sativus]
Length = 265
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|693914|gb|AAA80589.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|149392272|gb|ABR25974.1| chloroplast chlorophyll a-b binding protein precursor [Oryza sativa
Indica Group]
Length = 253
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 86 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 144
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 145 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 204
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 205 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 241
>gi|449461699|ref|XP_004148579.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
gi|449518125|ref|XP_004166094.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ F+ LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|56122690|gb|AAV74408.1| chloroplast chlorophyll A/B binding protein [Manihot esculenta]
Length = 243
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK GA + L+Y G I
Sbjct: 76 EVIHCRWAMLGALGCVFPEVLSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 134
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 135 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 194
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 195 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 231
>gi|218172|dbj|BAA00536.1| type I light-harvesting chlorophyll a/b-binding protein [Oryza
sativa Japonica Group]
gi|227611|prf||1707316A chlorophyll a/b binding protein 1
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
ELIH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 ELIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIK
Sbjct: 157 ILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKK 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|102140026|gb|ABF70157.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 264
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHGRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPGGAFDPLGLADDPDAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 252
>gi|693920|gb|AAA80593.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|5714656|gb|AAD48017.1|AF165529_1 chlorophyll a/b binding protein [Rumex palustris]
Length = 264
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSKNGVQFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLED--KLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ED KL+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWACQVVLMGFVEGYRVGGGPLGEDLDKLYPGGAFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL H++DP ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPVENLVDHIADPVANN 252
>gi|3036942|dbj|BAA25388.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|388503990|gb|AFK40061.1| unknown [Medicago truncatula]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|3036945|dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 256
>gi|326499874|dbj|BAJ90772.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNN 254
>gi|53627204|gb|AAU89253.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus contorta]
Length = 256
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNG--LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLREVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|297306780|dbj|BAJ08392.1| light harvesting chlorophyll a/b-binding protein Lhcb1 [Hordeum
vulgare subsp. vulgare]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|356559639|ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 1 [Glycine max]
gi|356559641|ref|XP_003548107.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 2 [Glycine max]
gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
isoform 3 [Glycine max]
Length = 264
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|3036949|dbj|BAA25393.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|53627226|gb|AAU89264.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus nelsonii]
Length = 256
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|255557387|ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223541141|gb|EEF42697.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|227139|prf||1615137B chlorophyll a/b binding protein P27
Length = 233
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 66 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQS 124
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 125 ILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKN 184
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 185 GRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVNNN 221
>gi|148514657|gb|ABQ81856.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVQFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|87313229|gb|ABD37911.1| light-harvesting chlorophyll-a/b binding protein LhcbM2b
[Chlamydomonas incerta]
Length = 229
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 110/164 (67%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G I PE K G G EAVWFK G+ + LNY G
Sbjct: 58 YRELELIHARWAMLGALGCITPELLAKNGIPFG-EAVWFKAGSQIFAEGGLNYLGNE--- 113
Query: 79 NLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALL 130
NLV A +IA ++V++G AE YR G E D LHPGG FDPLGLA DPD FA L
Sbjct: 114 NLVHAQSIIATLAFQVVVMGLAEAYRANGGPLGEGLDPLHPGGAFDPLGLADDPDTFAEL 173
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KVKEIKNGRLAMF+M GFF+QA VTG+GP++NL HL++P A N
Sbjct: 174 KVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLANPTAVN 217
>gi|9587207|gb|AAF89207.1|AF279250_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGSVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|255567270|ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536169|gb|EEF37824.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D ++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWASQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|227612|prf||1707316B chlorophyll a/b binding protein 2
Length = 263
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
ELIH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 ELIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA V G+GP+ENL H++DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVRGKGPIENLFDHVTDPVANN 251
>gi|38096045|gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|1657859|gb|AAB18209.1| chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
Length = 266
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 116/173 (67%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 85 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 202 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 254
>gi|357132518|ref|XP_003567877.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357132520|ref|XP_003567878.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357132522|ref|XP_003567879.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 3 [Brachypodium distachyon]
gi|357132524|ref|XP_003567880.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
gi|357132526|ref|XP_003567881.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Brachypodium distachyon]
Length = 263
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 155 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|148514659|gb|ABQ81857.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVQFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGNGPIENLADHLADPVNNN 253
>gi|53627224|gb|AAU89263.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus longaeva]
Length = 253
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 101 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 159
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 160 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 220 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 252
>gi|3036946|dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|115788|sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
Precursor
gi|169053|gb|AAA63413.1| cab precursor [Pisum sativum]
gi|169055|gb|AAA33651.1| polypeptide 15 precursor [Pisum sativum]
gi|223990|prf||1006296A protein,chlorophyll a/b binding
Length = 269
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 117/173 (67%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ +
Sbjct: 88 LSADPETFSKN--RELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSE 144
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 145 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 204
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 205 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 257
>gi|242053513|ref|XP_002455902.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
gi|241927877|gb|EES01022.1| hypothetical protein SORBIDRAFT_03g027040 [Sorghum bicolor]
Length = 265
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|115771|sp|P12329.1|CB21_MAIZE RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|22224|emb|CAA32900.1| unnamed protein product [Zea mays]
gi|194699340|gb|ACF83754.1| unknown [Zea mays]
gi|195607416|gb|ACG25538.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195613460|gb|ACG28560.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414886622|tpg|DAA62636.1| TPA: light harvesting chlorophyll a/b binding protein2 [Zea mays]
Length = 262
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 95 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 153
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 154 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 213
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 214 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>gi|283549609|emb|CAX64458.1| major chlorophyll a/b binding protein LHCb1.4 precursor [Spinacia
oleracea]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 86 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 142
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 203 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|359806638|ref|NP_001241277.1| uncharacterized protein LOC100805310 [Glycine max]
gi|255647962|gb|ACU24438.1| unknown [Glycine max]
Length = 263
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|94404555|gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 159 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|115792|sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
Precursor
gi|19823|emb|CAA36957.1| unnamed protein product [Nicotiana tabacum]
Length = 265
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|1345698|sp|P27518.2|CB21_GOSHI RecName: Full=Chlorophyll a-b binding protein 151, chloroplastic;
AltName: Full=LHCII type II CAB-151; Short=LHCP; Flags:
Precursor
gi|452314|emb|CAA38025.1| chlorophyll ab binding protein [Gossypium hirsutum]
Length = 265
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>gi|226502080|ref|NP_001147639.1| chlorophyll a-b binding protein 1, chloroplastic precursor [Zea
mays]
gi|195612774|gb|ACG28217.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 262
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 95 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 153
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 154 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 213
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 214 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
>gi|115808|sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
Precursor
gi|20487|emb|CAA26209.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 258
>gi|242045502|ref|XP_002460622.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
gi|241923999|gb|EER97143.1| hypothetical protein SORBIDRAFT_02g032040 [Sorghum bicolor]
Length = 262
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 95 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 153
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 154 ILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 213
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 214 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 250
>gi|53627220|gb|AAU89261.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monophylla]
Length = 256
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|133917261|emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 86 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 142
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 203 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|413968348|gb|AFW90512.1| chlorophyll a/b-binding protein [Phaseolus vulgaris]
Length = 263
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|53627222|gb|AAU89262.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus remota]
Length = 256
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|115780|sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|14240|emb|CAA32526.1| chlorophyll a/b binding protein precursor [Spinacia oleracea]
gi|193783447|emb|CAJ77389.3| major chlorophyll a/b binding protein LHCb1.3 [Spinacia oleracea]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|219879136|gb|ACL50948.1| putative chloroplast chlorophyll a/b binding protein [Solanum
nigrum]
Length = 249
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 82 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 140
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 141 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 200
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 201 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 237
>gi|53627212|gb|AAU89257.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus flexilis]
gi|53627214|gb|AAU89258.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus lambertiana]
gi|53627216|gb|AAU89259.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus monticola]
gi|53627218|gb|AAU89260.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus strobus]
Length = 256
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 104 EVIHSRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|2196774|gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVILMGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|307103588|gb|EFN51847.1| hypothetical protein CHLNCDRAFT_59790 [Chlorella variabilis]
Length = 251
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGA-NCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ E+IHARWAMLGA G + PE GA + G AVWFK GA + + LNY G
Sbjct: 77 YREIEVIHARWAMLGALGCLTPELLQNNGAADFGEAAVWFKAGASIFSDDGLNYLGNPSL 136
Query: 78 IN---LVFAVIAEIVLVGGAEYYRITNGLDLE---DKLHPGGPFDPLGLAKDPDQFALLK 131
I+ +V ++ ++V++G AE YR +E D L+PGG FDPLGLA DPD A LK
Sbjct: 137 IHAQSIVAVLLTQLVIMGAAEAYRYAGEGPVETSGDSLYPGGAFDPLGLADDPDTLAELK 196
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
VKE+KNGRLAMF+M GFF+QA +TG+ P+ENLA HL+DP N V +
Sbjct: 197 VKELKNGRLAMFSMFGFFVQALITGKSPLENLADHLADPSTANGFAVAT 245
>gi|109157229|pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157230|pdb|2BHW|B Chain B, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
gi|109157231|pdb|2BHW|C Chain C, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
Length = 232
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 118/176 (67%), Gaps = 8/176 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ +
Sbjct: 51 LSADPETFSKN--RELEVIHSRWAMLGALGSVFPELLSRNGVKFG-EAVWFKAGSQIFSE 107
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 108 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 167
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 168 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 223
>gi|53627206|gb|AAU89254.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus merkusii]
Length = 256
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|225461832|ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera]
gi|147833686|emb|CAN73057.1| hypothetical protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWASQVILMGAVEGYRIGGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|262410738|gb|ACY66805.1| chlorophyll a/b-binding protein [Pinus massoniana]
Length = 274
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 107 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 165
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 166 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 225
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRL MF+M GFF+QA VTG+GP+E+LA HL+DP NN
Sbjct: 226 GRLTMFSMFGFFVQAIVTGKGPIEDLADHLADPVNNN 262
>gi|122831060|gb|ABM66819.1| chloroplast light-harvesting chlorophyll a/b binding protein
[Bambusa oldhamii]
Length = 265
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 6/162 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYV 258
>gi|115802|sp|P27494.1|CB23_TOBAC RecName: Full=Chlorophyll a-b binding protein 36, chloroplastic;
AltName: Full=LHCII type I CAB-36; Short=LHCP; Flags:
Precursor
gi|19827|emb|CAA41188.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ AV A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>gi|115768|sp|P08221.1|CB21_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167523|gb|AAA33124.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 255
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 88 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 146
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 147 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 206
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 207 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 243
>gi|53627202|gb|AAU89252.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus radiata]
Length = 256
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|693922|gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G E VWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EVVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 256
>gi|359480215|ref|XP_002273106.2| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Vitis vinifera]
Length = 263
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPGLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 155 ILAIWACQVILMGAVEGYRIGGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|242088861|ref|XP_002440263.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
gi|241945548|gb|EES18693.1| hypothetical protein SORBIDRAFT_09g028720 [Sorghum bicolor]
Length = 265
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|3036951|dbj|BAA25394.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|47169444|pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
Protein Complex From Pea Thylakoid Membranes
Length = 232
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 118/176 (67%), Gaps = 8/176 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ +
Sbjct: 51 LSADPETFSKN--RELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSE 107
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 108 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 167
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 168 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 223
>gi|385298939|gb|AFI60242.1| light harvesting chlorophyll a/b binding protein, partial [Panicum
virgatum]
Length = 260
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 93 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 151
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 152 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 211
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 212 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 248
>gi|81074613|gb|ABB55370.1| chlorophyll a-b binding protein 3C-like [Solanum tuberosum]
Length = 267
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|126566046|gb|ABO20852.1| chlorophyll a/b binding protein of LHCII type I [Lilium
longiflorum]
Length = 264
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 156 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPVENLYDHLADPATNN 252
>gi|145079437|tpg|DAA05915.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm7 [Acetabularia acetabulum]
Length = 244
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 116/176 (65%), Gaps = 13/176 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T A Y+ ELIHARWAMLGA G + PE +K+ E+VWFK G+ +
Sbjct: 63 LSADPETFKA--YREQELIHARWAMLGALGCVTPEILSKYAGVSLGESVWFKAGSQIFQE 120
Query: 67 NTLNYFGKN--IPINLVFAVI-AEIVLVGGAEYYRIT-----NGLDLEDKLHPGGPFDPL 118
L+Y G + + A++ ++VL+G E YR+ GLD+ LHPG FDPL
Sbjct: 121 GGLDYLGNPSLVHAQSILAILGCQVVLMGLIEAYRVNGGPLGKGLDV---LHPGEKFDPL 177
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GLA DPD FA LKVKEIKNGRLAMF+M GF++QA VTG+GP+EN A+H++DPF+ N
Sbjct: 178 GLADDPDTFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPIENWAEHVADPFSVN 233
>gi|255647011|gb|ACU23974.1| unknown [Glycine max]
Length = 264
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+K+
Sbjct: 156 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKH 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|289920|gb|AAA18529.1| chlorophyll A/B binding protein [Gossypium hirsutum]
Length = 264
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLG A DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGFADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|285804077|gb|ADC35579.1| chloroplast chlorophyll a/b binding protein [Lycoris radiata]
Length = 265
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G + +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSDGGLDYLGNSSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWATQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA L+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADPLADPVNNN 253
>gi|63003222|dbj|BAD97888.1| CAB homologue1 [Lemna paucicostata]
Length = 231
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IHARWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 68 EVIHARWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 126
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 127 ILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 186
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 187 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 223
>gi|108709619|gb|ABF97414.1| Chlorophyll a-b binding protein, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 219
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 52 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 110
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 111 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 170
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 171 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 207
>gi|116779526|gb|ABK21323.1| unknown [Picea sitchensis]
Length = 266
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANN 254
>gi|116779784|gb|ABK21429.1| unknown [Picea sitchensis]
gi|116782287|gb|ABK22448.1| unknown [Picea sitchensis]
gi|116785934|gb|ABK23914.1| unknown [Picea sitchensis]
gi|116786318|gb|ABK24064.1| unknown [Picea sitchensis]
gi|116791776|gb|ABK26103.1| unknown [Picea sitchensis]
gi|116793629|gb|ABK26818.1| unknown [Picea sitchensis]
gi|148909078|gb|ABR17641.1| unknown [Picea sitchensis]
gi|224284321|gb|ACN39896.1| unknown [Picea sitchensis]
gi|224284480|gb|ACN39974.1| unknown [Picea sitchensis]
gi|224284600|gb|ACN40033.1| unknown [Picea sitchensis]
gi|224285740|gb|ACN40585.1| unknown [Picea sitchensis]
gi|224285871|gb|ACN40649.1| unknown [Picea sitchensis]
Length = 266
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANN 254
>gi|20182|emb|CAA32109.1| chlorophyll a/b-binding preprotein (AA -28 to 235) [Oryza sativa]
Length = 263
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLG G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 96 EVIHSRWAMLGGLGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 155 ILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|326493298|dbj|BAJ85110.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326493328|dbj|BAJ85125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 85 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 202 DDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPINNN 254
>gi|297845914|ref|XP_002890838.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
gi|297336680|gb|EFH67097.1| hypothetical protein ARALYDRAFT_473204 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 94 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 152
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 153 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 212
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 213 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNN 250
>gi|255646685|gb|ACU23816.1| unknown [Glycine max]
Length = 263
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|242053511|ref|XP_002455901.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
gi|241927876|gb|EES01021.1| hypothetical protein SORBIDRAFT_03g027030 [Sorghum bicolor]
Length = 266
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|87313235|gb|ABD37914.1| light-harvesting chlorophyll-a/b binding protein LhcbM9
[Chlamydomonas incerta]
Length = 254
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLAKNGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLACQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
E+KNGRLAMF+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 202 ELKNGRLAMFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 242
>gi|351724927|ref|NP_001235283.1| chlorophyll a/b-binding protein [Glycine max]
gi|1053216|gb|AAA80688.1| chlorophyll a/b-binding protein [Glycine max]
Length = 263
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|326509659|dbj|BAJ87045.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 85 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA
Sbjct: 142 GGLDYLGNPSFVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 202 DDPEAFAELKVKEVKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPINNN 254
>gi|326497177|dbj|BAK02173.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 85 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 202 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 254
>gi|87621681|gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWATQVLLMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|133917263|emb|CAJ77391.1| major chlorophyll a/b binding protein LHCb1.1 [Spinacia oleracea]
gi|283549607|emb|CAX64457.1| major chlorophyll a/b binding protein LHCb1.1 precursor [Spinacia
oleracea]
Length = 267
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 116/173 (67%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 86 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 142
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 202
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 203 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|357118770|ref|XP_003561122.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 4 [Brachypodium distachyon]
Length = 233
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
ELIH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 66 ELIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 124
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 125 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 184
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 185 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 221
>gi|413948509|gb|AFW81158.1| light harvesting chlorophyll a/b binding protein3 [Zea mays]
Length = 302
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 135 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 193
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 194 ILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 253
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 254 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 290
>gi|116782449|gb|ABK22510.1| unknown [Picea sitchensis]
gi|116782855|gb|ABK22691.1| unknown [Picea sitchensis]
gi|116791804|gb|ABK26115.1| unknown [Picea sitchensis]
gi|148908337|gb|ABR17282.1| unknown [Picea sitchensis]
Length = 278
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 170 ILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|145079271|tpg|DAA05907.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm4 [Acetabularia acetabulum]
Length = 219
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 112/170 (65%), Gaps = 7/170 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T A Y+ ELIHARWAMLGA G + PE +K+ E+VWFK G+ +
Sbjct: 44 LSADPETFKA--YREQELIHARWAMLGALGCVTPEILSKYAGVSFGESVWFKAGSQIFQE 101
Query: 67 NTLNYFGKN--IPINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G + + A++ ++VL+G E YR+ G E D LHPG FDPLGLA
Sbjct: 102 GGLDYLGNPSLVHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDTLHPGESFDPLGLA 161
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPF 171
DPD FA LK+KEIKNGRLAMF+M GF++QA VTG+GP+EN A H++DPF
Sbjct: 162 DDPDTFAELKIKEIKNGRLAMFSMFGFYVQAIVTGKGPIENWADHVADPF 211
>gi|146150146|gb|ABQ02464.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
RLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 215 SRLAMFSMFGFFVQAIVTGKGPIENLADHVADPVNNN 251
>gi|77157635|dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
Length = 265
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPEILARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 253
>gi|297851414|ref|XP_002893588.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
gi|297339430|gb|EFH69847.1| hypothetical protein ARALYDRAFT_473203 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 94 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 152
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 153 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 212
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 213 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVTNN 250
>gi|224284623|gb|ACN40044.1| unknown [Picea sitchensis]
Length = 278
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGWLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 170 ILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|12582|emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
Length = 193
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 26 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 84
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 85 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 144
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 145 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 181
>gi|194700378|gb|ACF84273.1| unknown [Zea mays]
gi|195619060|gb|ACG31360.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 266
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 254
>gi|359754903|gb|AEV59641.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 235
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 72 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 130
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 131 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 190
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 191 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 227
>gi|346987809|gb|AEO51755.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 263
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 96 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G + D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 155 ILAIWACQVVLMGAVEGYRIAGGPLGKVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GR AMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRSAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|357152998|ref|XP_003576305.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357153000|ref|XP_003576306.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357153003|ref|XP_003576307.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 266
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEVKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNN 254
>gi|17473828|gb|AAL38341.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21387019|gb|AAM47913.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 267
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 158 ILAIWATQVILMGAVEGYRVAGNEPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 217
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>gi|116782415|gb|ABK22497.1| unknown [Picea sitchensis]
gi|116786586|gb|ABK24164.1| unknown [Picea sitchensis]
gi|116791880|gb|ABK26145.1| unknown [Picea sitchensis]
gi|148908679|gb|ABR17447.1| unknown [Picea sitchensis]
gi|148909254|gb|ABR17727.1| unknown [Picea sitchensis]
gi|224284476|gb|ACN39972.1| unknown [Picea sitchensis]
gi|224285327|gb|ACN40388.1| unknown [Picea sitchensis]
Length = 266
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHCRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPESFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTANN 254
>gi|224064850|ref|XP_002301582.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|118486872|gb|ABK95270.1| unknown [Populus trichocarpa]
gi|118488008|gb|ABK95825.1| unknown [Populus trichocarpa]
gi|222843308|gb|EEE80855.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G E+VWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPEILAKNGVKFG-ESVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVENLLDHLADPVANN 253
>gi|359754911|gb|AEV59645.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis lambertii]
Length = 237
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 70 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 128
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 129 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 188
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 189 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 225
>gi|359754907|gb|AEV59643.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 236
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 70 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 128
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 129 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 188
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 189 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 225
>gi|3126854|gb|AAC15992.1| chlorophyll a/b binding protein [Oryza sativa Japonica Group]
Length = 263
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++P G FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPSGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 251
>gi|15220615|ref|NP_174286.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
gi|115783|sp|P04778.1|CB1C_ARATH RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=Chlorophyll a-b protein 140;
Short=CAB-140; AltName: Full=LHCII type I CAB-1; Flags:
Precursor
gi|9972353|gb|AAG10603.1|AC008030_3 Putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16226883|gb|AAL16289.1|AF428359_1 At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|16376|emb|CAA27543.1| chlorophyll a/b binding protein (LHCP AB 140) [Arabidopsis
thaliana]
gi|15010744|gb|AAK74031.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|15293003|gb|AAK93612.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16648807|gb|AAL25594.1| At1g29930/F1N18_23 [Arabidopsis thaliana]
gi|20258873|gb|AAM14108.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332193030|gb|AEE31151.1| chlorophyll a-b binding protein 1 [Arabidopsis thaliana]
Length = 267
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 158 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 217
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>gi|116780878|gb|ABK21859.1| unknown [Picea sitchensis]
gi|116780908|gb|ABK21874.1| unknown [Picea sitchensis]
gi|116786305|gb|ABK24058.1| unknown [Picea sitchensis]
gi|116788326|gb|ABK24837.1| unknown [Picea sitchensis]
gi|116791751|gb|ABK26095.1| unknown [Picea sitchensis]
gi|224284118|gb|ACN39796.1| unknown [Picea sitchensis]
gi|224284899|gb|ACN40179.1| unknown [Picea sitchensis]
Length = 266
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHCRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANN 254
>gi|359754901|gb|AEV59640.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis campestris subsp. johannensis]
gi|359754909|gb|AEV59644.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis splendens]
Length = 239
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 72 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 130
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 131 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 190
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 191 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 227
>gi|194703220|gb|ACF85694.1| unknown [Zea mays]
gi|195616570|gb|ACG30115.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|195623468|gb|ACG33564.1| chlorophyll a-b binding protein 1 [Zea mays]
gi|413948507|gb|AFW81156.1| light harvesting chlorophyll a/b binding protein3 isoform 1 [Zea
mays]
gi|413948508|gb|AFW81157.1| light harvesting chlorophyll a/b binding protein3 isoform 2 [Zea
mays]
Length = 265
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|413968456|gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Solanum tuberosum]
Length = 233
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 66 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 124
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 125 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 184
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 185 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 221
>gi|123316054|gb|ABM74386.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
gi|123316062|gb|ABM74387.1| major light-harvesting chlorophyll a/b protein 3 [Dunaliella
salina]
Length = 261
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 111/168 (66%), Gaps = 7/168 (4%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGAN-CGPEAVWFKTGALLLDGNTLNYF 72
T+ + Y+ E+IHARWA+LGA G + PE + G G A+WFK G+ + LNY
Sbjct: 82 TTFARYRTIEVIHARWALLGALGIVTPEILAQNGVPFSGDAAIWFKAGSEIFKEGGLNYL 141
Query: 73 GKN--IPINLVFAVIA-EIVLVGGAEYYRITN---GLDLEDKLHPGGPFDPLGLAKDPDQ 126
G I + A +A +++++G AE +R G++ D L+PGGPFDPLGLA DPD
Sbjct: 142 GNPNLIHAQSILATLAVQVIVMGAAEGFRANGEAPGVEGLDTLYPGGPFDPLGLADDPDT 201
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
FA LKVKEIKNGRLAMFA GFF+QA VTG+GP++NL HL+DP NN
Sbjct: 202 FAELKVKEIKNGRLAMFACFGFFVQAIVTGKGPIQNLEDHLADPGVNN 249
>gi|18397286|ref|NP_564339.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|18397288|ref|NP_564340.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=Chlorophyll a-b protein 165;
Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags:
Precursor
gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=Chlorophyll a-b protein 180;
Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags:
Precursor
gi|9972354|gb|AAG10604.1|AC008030_4 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein (LHCP AB 65) [Arabidopsis thaliana]
gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|15809862|gb|AAL06859.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80 [Arabidopsis thaliana]
gi|17065476|gb|AAL32892.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|21555860|gb|AAM63949.1| photosystem II type I chlorophyll a /b binding protein, putative
[Arabidopsis thaliana]
gi|22135932|gb|AAM91548.1| photosystem II type I chlorophyll a/b binding protein, putative
[Arabidopsis thaliana]
gi|23397170|gb|AAN31868.1| putative photosystem II type I chlorophyll a /b binding protein
[Arabidopsis thaliana]
gi|332193028|gb|AEE31149.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
gi|332193029|gb|AEE31150.1| chlorophyll a-b binding protein 2/3 [Arabidopsis thaliana]
Length = 267
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 158 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 217
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 255
>gi|359754899|gb|AEV59639.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 239
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 72 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 130
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 131 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 190
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 191 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 227
>gi|386784577|gb|AFJ25031.1| chlorophyll a/b binding protein [Lonicera japonica]
Length = 265
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGLIEGYRIGGGPLGEGLDSLYPGGAFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVENLYDHLADPVANN 253
>gi|226510115|ref|NP_001148439.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|195619284|gb|ACG31472.1| chlorophyll a-b binding protein 2 [Zea mays]
gi|414881723|tpg|DAA58854.1| TPA: chlorophyll a-b binding protein 2 [Zea mays]
Length = 264
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 252
>gi|223974123|gb|ACN31249.1| unknown [Zea mays]
Length = 233
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 66 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 124
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 125 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 184
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 185 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 221
>gi|146403796|gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Artemisia annua]
Length = 254
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 87 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 145
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 146 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 205
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
GRLAMF+M GFF+QA VTG+GP+ENLA L+DP ANN +
Sbjct: 206 GRLAMFSMFGFFVQAIVTGKGPLENLADRLADPVANNAWS 245
>gi|607148|emb|CAA57407.1| light harvesting chlorophyll a /b-binding protein Lhcb1*1 [Picea
abies]
Length = 278
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLIHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A +++L+G E YR+ G ++ D ++PGG FDPLG A DPD FA LKVKE+KN
Sbjct: 170 ILAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|115810|sp|P27496.1|CB25_TOBAC RecName: Full=Chlorophyll a-b binding protein 50, chloroplastic;
AltName: Full=LHCII type I CAB-50; Short=LHCP; Flags:
Precursor
gi|19833|emb|CAA36956.1| unnamed protein product [Nicotiana tabacum]
Length = 267
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVK IKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|326488085|dbj|BAJ89881.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH RWAMLGA G + PE + G G EAVWFK G+ + +
Sbjct: 85 LSADPETFSKN--RELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFNE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA
Sbjct: 142 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 202 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLGDHITDPVNNN 254
>gi|326506218|dbj|BAJ86427.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A + VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQAVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHITDPVNNN 254
>gi|4512125|gb|AAD21625.1| putative chlorophyll a/b-binding protein [Phalaenopsis hybrid
cultivar]
Length = 277
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G I PE + G G EAVWFK G+ + L+Y G I
Sbjct: 110 EVIHSRWAMLGALGCIFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 168
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 169 ILAIWAVQVVLMGAVEGYRIAGGPLGEITDPLYPGNSFDPLGLADDPEAFAELKVKELKN 228
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 229 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 265
>gi|326510047|dbj|BAJ87240.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G I PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGSIFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H+ DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHIVDPVNNN 254
>gi|159478875|ref|XP_001697526.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|19749357|gb|AAD03732.2| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
gi|158274405|gb|EDP00188.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 268
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 7/165 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE K G E VWFK GA + L+Y G +
Sbjct: 97 YRELELIHARWAMLGALGCITPELLAKNGTPI-VEPVWFKAGAQIFAEGGLDYLGNPGLV 155
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPF-DPLGLAKDPDQFALLKV 132
+ A +A +++L+G E YR+ G E DKLHPGG F DPLGLA+DPD FA LKV
Sbjct: 156 HAQSILATLAVQVILMGAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKV 215
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
KEIKNGRLAMF+M GFF+QA VTG+GP+ NL +HL+ PF +N T
Sbjct: 216 KEIKNGRLAMFSMFGFFVQAIVTGKGPLANLDEHLASPFTSNAFT 260
>gi|115439621|ref|NP_001044090.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|18461220|dbj|BAB84417.1| putative chlorophyll a/b-binding protein 3C precursor [Oryza sativa
Japonica Group]
gi|113533621|dbj|BAF06004.1| Os01g0720500 [Oryza sativa Japonica Group]
gi|125527527|gb|EAY75641.1| hypothetical protein OsI_03546 [Oryza sativa Indica Group]
gi|125571846|gb|EAZ13361.1| hypothetical protein OsJ_03282 [Oryza sativa Japonica Group]
gi|215678907|dbj|BAG96337.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679047|dbj|BAG96477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764952|dbj|BAG86649.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVI-AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWGCQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|365268967|gb|AEW70716.1| light harvesting chlorophyll a-b binding protein 2-1 [Phyllostachys
edulis]
Length = 263
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVNNN 251
>gi|1262847|gb|AAB19040.1| type 2 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 246
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 79 EVIHSRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 137
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 138 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 197
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 198 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 234
>gi|8954293|gb|AAD27879.2|AF139467_1 LHCII type I chlorophyll a/b binding protein [Vigna radiata]
Length = 263
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 96 EVIHSRWAMLGALGIVFPEPLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D +PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPTYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF++ GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 215 GRLAMFSVFGFFVQAIVTGKGPLENLADHLADPVNNN 251
>gi|53627200|gb|AAU89251.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus ponderosa]
Length = 256
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 104/153 (67%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G + D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGXVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|3036953|dbj|BAA25395.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLVDHLADPVNNN 255
>gi|414881722|tpg|DAA58853.1| TPA: hypothetical protein ZEAMMB73_924562 [Zea mays]
Length = 259
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 92 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 150
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 151 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 210
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 211 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 247
>gi|115774|sp|P04779.1|CB21_PETSP RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type I CAB-13; Short=LHCP; Flags:
Precursor
gi|20471|emb|CAA26210.1| unnamed protein product [Petunia sp.]
Length = 266
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RW MLGA G + PE F + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA L+VKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|9587205|gb|AAF89206.1|AF279249_1 LHCII type I chlorophyll a/b-binding protein [Vigna radiata]
Length = 264
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 156 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF++ GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSIFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|224284588|gb|ACN40027.1| unknown [Picea sitchensis]
Length = 278
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A +++L+G E YR+ G ++ D ++PGG FDPLG A DPD FA LKVKE+KN
Sbjct: 170 ILAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|20939|emb|CAA43907.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 266
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHCRWAMLGALGCLFPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
>gi|115791|sp|P09755.1|CB22_SOYBN RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18548|emb|CAA31418.1| chlorophyll a/b binding preprotein (AA -33 to 223) [Glycine max]
Length = 256
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 89 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 147
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ A LKVKE+KN
Sbjct: 148 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKN 207
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 208 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 244
>gi|47168888|pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168890|pdb|1RWT|C Chain C, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168891|pdb|1RWT|D Chain D, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168893|pdb|1RWT|F Chain F, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168894|pdb|1RWT|G Chain G, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168896|pdb|1RWT|I Chain I, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
gi|47168897|pdb|1RWT|J Chain J, Crystal Structure Of Spinach Major Light-harvesting
Complex At 2.72 Angstrom Resolution
Length = 232
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 65 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 123
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 124 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 183
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 184 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 220
>gi|116784226|gb|ABK23263.1| unknown [Picea sitchensis]
gi|116792001|gb|ABK26194.1| unknown [Picea sitchensis]
gi|224285000|gb|ACN40229.1| unknown [Picea sitchensis]
gi|224285305|gb|ACN40377.1| unknown [Picea sitchensis]
Length = 278
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A +++L+G E YR+ G ++ D ++PGG FDPLG A DPD FA LKVKE+KN
Sbjct: 170 ILAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|357495319|ref|XP_003617948.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355519283|gb|AET00907.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 265
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPV+NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANN 253
>gi|384253340|gb|EIE26815.1| major light-harvesting complex II protein m10 [Coccomyxa
subellipsoidea C-169]
Length = 250
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 110/161 (68%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE K G + G EAVW+K G+ + L+Y G I
Sbjct: 80 YREIEVIHARWAMLGALGCVTPELLAKNGVSFG-EAVWWKAGSQIFAPGGLDYLGNPSLI 138
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ ++ V ++++L+G E YR+ G E D L+PG FDPLGLA DPD FA L+VK
Sbjct: 139 HAQSIIAIVFSQVLLMGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFAELRVK 198
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL++P NN
Sbjct: 199 EIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLANPSVNN 239
>gi|116781997|gb|ABK22330.1| unknown [Picea sitchensis]
Length = 278
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A +++L+G E YR+ G ++ D ++PGG FDPLG A DPD FA LKVKE+KN
Sbjct: 170 ILAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|116791684|gb|ABK26071.1| unknown [Picea sitchensis]
gi|148908641|gb|ABR17429.1| unknown [Picea sitchensis]
Length = 278
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A +++L+G E YR+ G ++ D ++PGG FDPLG A DPD FA LKVKE+KN
Sbjct: 170 ILAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|116785761|gb|ABK23849.1| unknown [Picea sitchensis]
Length = 278
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A++A +++L+G E YR+ G ++ D ++PGG FDPLG A DPD FA LKVKE+KN
Sbjct: 170 ILAILACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGWADDPDAFAELKVKELKN 229
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 230 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 266
>gi|170404|gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
Length = 267
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLG A DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGPADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|53627210|gb|AAU89256.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus chiapensis]
Length = 256
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L++ G I
Sbjct: 104 EVIHSRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDHLGNPSLIHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|12324161|gb|AAG52048.1|AC022455_2 chlorophyll A-B-binding protein 2 precursor, 5' partial; 1-750
[Arabidopsis thaliana]
Length = 249
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 81 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 139
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 140 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 199
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 200 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 237
>gi|693918|gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 108/160 (67%), Gaps = 6/160 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFREGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ + L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVNPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN +
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWS 256
>gi|62176932|emb|CAG25596.1| putative chlorophyll a/b binding protein [Triticum durum]
Length = 250
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWF G+ + L+Y G +
Sbjct: 94 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFMAGSQIFSEGGLDYLGNPSLVHAQS 152
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 153 ILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 212
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 213 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 249
>gi|47026843|gb|AAT08647.1| chloroplast chlorophyll A-B binding protein 3C [Hyacinthus
orientalis]
Length = 220
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 56 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 114
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 115 ILAIWATQVLLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 174
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 175 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 211
>gi|307105157|gb|EFN53408.1| hypothetical protein CHLNCDRAFT_137219 [Chlorella variabilis]
Length = 258
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 110/163 (67%), Gaps = 7/163 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGA-NCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ ELIH+RWA+LGA G + PE + GA + G AVWFK GA + + LNY G
Sbjct: 82 YREIELIHSRWALLGALGILTPEYLQRSGAVDFGEAAVWFKAGASIFGDDGLNYLGNPQL 141
Query: 78 IN---LVFAVIAEIVLVGGAEYYRITNGLDLE---DKLHPGGPFDPLGLAKDPDQFALLK 131
I+ +V ++A+IVLVG AE YR ++ DKL+PGG FDPLGL DP+ A LK
Sbjct: 142 IHAQSIVATLLAQIVLVGTAEAYRYAGEGPVDTSGDKLYPGGFFDPLGLGDDPEALAELK 201
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
VKEIKNGRLA ++ GFF+QA VTG+GP+ENL HL+DP+ NN
Sbjct: 202 VKEIKNGRLAQVSVFGFFVQALVTGKGPLENLDDHLADPWNNN 244
>gi|671737|emb|CAA52749.1| Chloropyll a/b binding protein [Amaranthus hypochondriacus]
Length = 186
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 19 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 77
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 78 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPDAFAELKVKEIKN 137
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
G LAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 138 GMLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 174
>gi|115795|sp|P12469.1|CB23_NICPL RecName: Full=Chlorophyll a-b binding protein C, chloroplastic;
AltName: Full=LHCII type I CAB-C; Short=LHCP; Flags:
Precursor
gi|170210|gb|AAA34055.1| chlorophyll a/b-binding protein-C [Nicotiana plumbaginifolia]
Length = 267
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|53748425|emb|CAH59405.1| light harvesting protein 1 [Plantago major]
Length = 229
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 62 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 120
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 121 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 180
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 181 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 217
>gi|224131818|ref|XP_002321186.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
gi|222861959|gb|EEE99501.1| light-harvesting complex II protein Lhcb2 [Populus trichocarpa]
Length = 265
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G E+VWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPEILAKNGVKFG-ESVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA +TG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIITGKGPIENLLDHLADPVANN 253
>gi|18403549|ref|NP_565787.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|11908034|gb|AAG41446.1|AF326864_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|12642854|gb|AAK00369.1|AF339687_1 putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|16366|emb|CAA45789.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128229|gb|AAC26709.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|20197164|gb|AAM14951.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
gi|21539563|gb|AAM53334.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|25083751|gb|AAN72114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|330253879|gb|AEC08973.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 266
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 157 ILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 216
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|397789256|gb|AFO67217.1| putative chlorophyll a/b binding protein [Aralia elata]
Length = 265
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 108/158 (68%), Gaps = 8/158 (5%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNG---LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A ++VL+G E YR+ G L DK++PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGWGL-DKIYPGGSFDPLGLADDPEAFAELKVKELK 215
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 253
>gi|384253059|gb|EIE26534.1| chlorophyll a/b-binding protein P25 [Coccomyxa subellipsoidea
C-169]
Length = 234
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 111/162 (68%), Gaps = 7/162 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ E+IHARWAMLGA G + PE K G + G EAVW+K GA + L+Y G +
Sbjct: 64 YREIEVIHARWAMLGALGCLTPELLAKNGVSFG-EAVWWKAGAQIFAPGGLDYLGNPSLV 122
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ A++A +++L+G E YR+ G E DK++PGG FDPLGLA DPD FA LKV
Sbjct: 123 HAQSIIAILASQVLLMGAIEGYRVYGGPGGEGLDKVYPGGDYFDPLGLADDPDTFAELKV 182
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 183 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLESHLADPSVNN 224
>gi|21592428|gb|AAM64379.1| putative photosystem II type I chlorophyll a b binding protein
[Arabidopsis thaliana]
Length = 266
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVEFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 157 ILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 216
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|4139216|gb|AAD03731.1| light harvesting complex II protein precursor [Chlamydomonas
reinhardtii]
Length = 254
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 106/161 (65%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 83 YRELELIHARWAMLGALGCLTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 141
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQNIVATLAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNG LAMF+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 202 EIKNGALAMFSMFGFFVQAIVTGKGPVQNLDDHLANPGVNN 242
>gi|18403546|ref|NP_565786.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|13926260|gb|AAK49602.1|AF372886_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16226426|gb|AAL16165.1|AF428397_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930391|gb|AAL31882.1|AF419548_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16930467|gb|AAL31919.1|AF419587_1 At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|16364|emb|CAA45790.1| photosystem II type I chlorophyll a /b binding protein [Arabidopsis
thaliana]
gi|3128230|gb|AAC26710.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|14517452|gb|AAK62616.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|15027899|gb|AAK76480.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|17473689|gb|AAL38301.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|19310503|gb|AAL84985.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|19310521|gb|AAL84994.1| At2g34420/T31E10.24 [Arabidopsis thaliana]
gi|20148517|gb|AAM10149.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|20197168|gb|AAM14954.1| photosystem II type I chlorophyll a b binding protein [Arabidopsis
thaliana]
gi|23296426|gb|AAN13114.1| putative photosystem II type I chlorophyll a/b binding protein
[Arabidopsis thaliana]
gi|110739111|dbj|BAF01472.1| photosystem II type I chlorophyll a/b binding protein [Arabidopsis
thaliana]
gi|330253878|gb|AEC08972.1| light-harvesting complex II chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 265
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 156 ILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 215
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|115778|sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
Precursor
gi|21138|emb|CAA34459.1| unnamed protein product [Sinapis alba]
gi|21140|emb|CAA33903.1| chlorophyll a/b-binding polypeptide [Sinapis alba]
Length = 266
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 106/158 (67%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKEIK
Sbjct: 157 ILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIK 216
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|115807|sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
Precursor
gi|170212|gb|AAA34056.1| chlorophyll a/b-binding protein-E [Nicotiana plumbaginifolia]
Length = 266
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNN 254
>gi|16374|emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
thaliana]
Length = 233
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 65 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 123
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 124 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 183
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 184 NGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 221
>gi|227138|prf||1615137A chlorophyll a/b binding protein P25
Length = 226
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 114/173 (65%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
VSA +T + + + E+IH RWAMLGA G + PE K G G EAVWFK GA +
Sbjct: 45 VSADPETFAKN--RELEVIHCRWAMLGALGCVFPELLVKNGVKFG-EAVWFKAGAQIFSE 101
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G I + A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA
Sbjct: 102 GGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 161
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 162 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 214
>gi|87313207|gb|ABD37900.1| light-harvesting chlorophyll-a/b binding protein LhcbM3
[Acutodesmus obliquus]
Length = 248
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 113/178 (63%), Gaps = 14/178 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT S Y+ E+IHARWAMLGA G I PE K G G EAVWFK GA +
Sbjct: 63 LSADPQTFSR--YREVEVIHARWAMLGALGCITPELLAKNGVPFG-EAVWFKAGAQIFQD 119
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL------DLEDKLHPGGPF-D 116
LNY G + + A +A +++L+G AE YR G DL D L+PGG F D
Sbjct: 120 GGLNYLGNENLVHAQSILATLAVQVILMGAAEAYRANGGAPGGFGEDL-DSLYPGGKFFD 178
Query: 117 PLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
PLGLA DPD A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ NL HL+DP NN
Sbjct: 179 PLGLADDPDTLAELKVKELKNGRLAMFSMFGFFVQAIVTGQGPIANLDAHLADPSGNN 236
>gi|162463409|ref|NP_001105545.1| chlorophyll a-b binding protein M9, chloroplastic precursor [Zea
mays]
gi|115815|sp|P27497.1|CB29_MAIZE RecName: Full=Chlorophyll a-b binding protein M9, chloroplastic;
AltName: Full=LHCII type I CAB-M9; Short=LHCP; Flags:
Precursor
gi|22355|emb|CAA39376.1| light-harvesting chlorophyll a/b binding protein [Zea mays]
Length = 265
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA +KVKE+KN
Sbjct: 157 ILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|217072028|gb|ACJ84374.1| unknown [Medicago truncatula]
Length = 265
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWATRVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPV+NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPVQNLYDHVADPVANN 253
>gi|18266039|gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica oleracea]
Length = 266
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 106/158 (67%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKEIK
Sbjct: 157 ILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLAADPEAFAELKVKEIK 216
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|357496387|ref|XP_003618482.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355493497|gb|AES74700.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 265
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 157 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NLA H++DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLKNLADHIADPVNNN 253
>gi|359754905|gb|AEV59642.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis maydelliana]
Length = 238
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 72 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 130
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA KVKE+KN
Sbjct: 131 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAEXKVKELKN 190
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 191 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 227
>gi|255581778|ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223528666|gb|EEF30681.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 265
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>gi|115826|sp|P22686.1|CB2_CHLMO RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|18063|emb|CAA38635.1| chlorophyll a/b-binding protein [Chlamydomonas moewusii]
Length = 256
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 105/161 (65%), Gaps = 5/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWA+LGA G + PE + + E VWFK GA + L+Y G I
Sbjct: 84 YRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALI 143
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 144 HAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 203
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+ GFF+QA VTG+GP++NLA HL+DP NN
Sbjct: 204 EIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNN 244
>gi|20178|emb|CAA32108.1| chlorophyll a/b-binding preprotein (AA -31 to 235) [Oryza sativa]
Length = 266
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ A LKVK+IKN
Sbjct: 158 ILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEACAELKVKKIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
>gi|115812|sp|P27491.1|CB27_TOBAC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCII type I CAB-7; Short=LHCP; Flags:
Precursor
gi|19837|emb|CAA41187.1| chlorophyll a /b binding protein [Nicotiana tabacum]
Length = 267
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNN 255
>gi|297826903|ref|XP_002881334.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
gi|297327173|gb|EFH57593.1| chlorophyll A-B-binding protein 2 precursor [Arabidopsis lyrata
subsp. lyrata]
Length = 245
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 77 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 135
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 136 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 195
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 196 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 233
>gi|359806053|ref|NP_001241179.1| uncharacterized protein LOC100815789 [Glycine max]
gi|255638947|gb|ACU19775.1| unknown [Glycine max]
Length = 265
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|297823231|ref|XP_002879498.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
gi|297325337|gb|EFH55757.1| LHB1B1 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ NG + ED L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 157 ILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELK 216
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENL+ HL+DP NN
Sbjct: 217 NGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVNNN 254
>gi|126362926|gb|ABO10493.1| light-harvesting chlorophyll a/b binding protein [Bambusa oldhamii]
Length = 263
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 107/156 (68%), Gaps = 6/156 (3%)
Query: 24 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLV 81
+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G + +
Sbjct: 97 VIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSI 155
Query: 82 FAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
A+ A ++VL+G E YRI G E DK++PGG FDPLGLA DPD FA LKVKE+KNG
Sbjct: 156 LAIWASQVVLMGFVEGYRIGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNG 215
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
RLAMF+M GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 216 RLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVNNN 251
>gi|115800|sp|P09756.1|CB23_SOYBN RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type I CAB-3; Short=LHCP; Flags:
Precursor
gi|18552|emb|CAA31419.1| chlorophyll a/b binding preprotein (AA - 32 to 231) [Glycine max]
Length = 263
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 96 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 155 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+ P NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNN 251
>gi|226492741|ref|NP_001148271.1| chlorophyll a-b binding protein [Zea mays]
gi|195617084|gb|ACG30372.1| chlorophyll a-b binding protein [Zea mays]
gi|238006080|gb|ACR34075.1| unknown [Zea mays]
gi|414871640|tpg|DAA50197.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 1 [Zea mays]
gi|414871641|tpg|DAA50198.1| TPA: type II light-harvesting chlorophyll a /b-binding protein
isoform 2 [Zea mays]
gi|414871644|tpg|DAA50201.1| TPA: light harvesting chlorophyll binding protein9 isoform 1 [Zea
mays]
gi|414871645|tpg|DAA50202.1| TPA: light harvesting chlorophyll binding protein9 isoform 2 [Zea
mays]
Length = 260
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 93 EVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 151
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 152 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 211
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 212 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 248
>gi|9587203|gb|AAF89205.1|AF279248_1 LHCII type II chlorophyll a/b-binding protein [Vigna radiata]
Length = 265
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGIVFPEILEKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF++ GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSVFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|413968514|gb|AFW90594.1| chloroplast chlorophyll a/b binding protein [Solanum tuberosum]
Length = 276
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G PE + G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCDFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+ GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 217 GRLAMFSTFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|29123378|gb|AAO62942.1| chlorophyll a/b binding protein [Nicotiana tabacum]
Length = 265
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL ++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDQINDPVANN 253
>gi|6716783|gb|AAF26741.1|AF220527_1 chlorophyll a/b binding protein precursor [Euphorbia esula]
Length = 268
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 101 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 159
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 160 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL DP NN
Sbjct: 220 GRLAMFSMFGFFVQAIVTGKGPLENLADHLFDPVNNN 256
>gi|53627208|gb|AAU89255.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus roxburghii]
Length = 256
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 104/153 (67%), Gaps = 6/153 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLRLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLADP 255
>gi|242038937|ref|XP_002466863.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
gi|241920717|gb|EER93861.1| hypothetical protein SORBIDRAFT_01g015400 [Sorghum bicolor]
Length = 262
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 95 EVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 153
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 154 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 213
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 214 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 250
>gi|195618248|gb|ACG30954.1| chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 93 EVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 151
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 152 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 211
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 212 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 248
>gi|118489455|gb|ABK96530.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 265
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G E+VWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPEILAKNGVKFG-ESVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLA F+M GFF+QA VTG+GPVENL HL+DP ANN
Sbjct: 217 GRLATFSMFGFFVQAIVTGKGPVENLLDHLADPVANN 253
>gi|148909129|gb|ABR17665.1| unknown [Picea sitchensis]
Length = 266
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++ L+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWASQVGLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANN 254
>gi|20218821|emb|CAC84495.1| putative chlorophyll A-B binding protein type I [Pinus pinaster]
Length = 195
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 28 EVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 86
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 87 ILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKN 146
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 147 GRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPTANN 183
>gi|110224742|emb|CAL07971.1| chlorophyll a/b-binding protein, photosystem II [Platanus x
acerifolia]
Length = 235
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE ++ G G EAVWFK GA + L+Y G +
Sbjct: 71 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 129
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G + L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 130 ILAIWATQVILMGAVEGYRVAGGPLGKVTGPLYPGGSFDPLGLADDPEAFAELKVKEIKN 189
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 190 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 226
>gi|449453598|ref|XP_004144543.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
gi|449511798|ref|XP_004164056.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic-like
[Cucumis sativus]
Length = 265
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G E+VWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLAKNGVKFG-ESVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 253
>gi|115827|sp|P14273.1|CB2_CHLRE RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20269802|gb|AAM18056.1|AF495472_1 major light-harvesting complex II protein m6 [Chlamydomonas
reinhardtii]
gi|167409|gb|AAA33082.1| chlorophyll a/b-binding protein [Chlamydomonas reinhardtii]
Length = 253
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G PE K G G EAVWFK GA + L+Y G +
Sbjct: 82 YRELELIHARWAMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLV 140
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
N+V +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKVK
Sbjct: 141 HAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVK 200
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLA F+M GFF+QA VTG+GPV+NL HL++P NN
Sbjct: 201 EIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 241
>gi|16805332|gb|AAL29886.1|M97171_1 chlorophyll a/b binding protein type II [Glycine max]
Length = 265
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|226263|prf||1503276A chlorophyll a/b binding protein
Length = 245
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G I
Sbjct: 78 EVIHSRWAMLGALGCVFPELLARNGVKFG-EACWFKAGSQIFSEGGLDYLGNQSLIHAQS 136
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DP+ FA LKVKE+KN
Sbjct: 137 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKELKN 196
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 197 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 233
>gi|14423661|sp|P92919.1|CB23_APIGR RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Allergen=Api g 3; Flags: Precursor
gi|1769849|emb|CAA99993.1| chlorophyll a/b binding protein [Apium graveolens]
Length = 264
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 97 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ ++ A +++L+G E YR+ G ++ D L+PGG FDPLGLA+DP++ A LKVKE+KN
Sbjct: 156 ILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKVKELKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|454250|emb|CAA82853.1| light-harvesting chlorophyll a/b binding protein [Trifolium repens]
Length = 167
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 105/156 (67%), Gaps = 6/156 (3%)
Query: 24 LIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLV 81
+IH+RWAMLGA G PE K G G EAVWFK GA + L+Y G I +
Sbjct: 1 VIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI 59
Query: 82 FAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
A+ A ++VL+G E YRI G E D L+PGG FDPLGLA DPD FA LKVKE+KNG
Sbjct: 60 LAIWATQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKNG 119
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
RLAMF+M GFF+QA VTG+GPV+NL HL+DP ANN
Sbjct: 120 RLAMFSMFGFFVQAIVTGKGPVQNLYDHLADPVANN 155
>gi|115785|sp|P08963.1|CB22_HORVU RecName: Full=Chlorophyll a-b binding protein 2, chloroplastic;
AltName: Full=LHCII type I CAB-2; Short=LHCP; Flags:
Precursor
gi|18943|emb|CAA31232.1| LHC precursor protein (AA -34 to 230) [Hordeum vulgare]
Length = 264
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L Y G +
Sbjct: 97 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA D + FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|358248712|ref|NP_001240183.1| uncharacterized protein LOC100793702 [Glycine max]
gi|255635740|gb|ACU18219.1| unknown [Glycine max]
Length = 265
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|1006704|emb|CAA89823.1| light-harvesting chlorophyll a/b binding protein of photosystem II
[Pseudotsuga menziesii]
Length = 234
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 67 EVIHSRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 125
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 126 ILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 185
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 186 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPTANN 222
>gi|115784|sp|P08222.1|CB22_CUCSA RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|167525|gb|AAA33125.1| chlorophyll a/b-binding protein, partial [Cucumis sativus]
Length = 206
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+ WAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 39 EVIHSTWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 97
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 98 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKN 157
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 158 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 194
>gi|307106007|gb|EFN54254.1| hypothetical protein CHLNCDRAFT_59709 [Chlorella variabilis]
Length = 243
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 106/167 (63%), Gaps = 11/167 (6%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S Y+ E+IHARWAMLGA G + PE K GA EAVWFK GA + L+Y G
Sbjct: 71 SRYRELEVIHARWAMLGALGCVTPELLQKNGAANFGEAVWFKAGAQIFQDGGLDYLGN-- 128
Query: 77 PINLVFA------VIAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFA 128
NLV A ++ +IVL+G E YR+ G ++ D ++PG FDPLGLA DPD A
Sbjct: 129 -ANLVHAQSIVAVLLTQIVLMGLIEGYRVNGGPAGEITDPIYPGEAFDPLGLADDPDTLA 187
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
LKVKEIKNGRLAM +M GFF+QA VTG+GP+ENL HL+ P N
Sbjct: 188 ELKVKEIKNGRLAMVSMFGFFIQAIVTGKGPIENLNDHLAAPGETNF 234
>gi|19423289|gb|AAL88458.1|AF479779_1 major light-harvesting complex II protein m7 [Chlamydomonas
reinhardtii]
Length = 258
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 106/165 (64%), Gaps = 13/165 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G I PE K G G EAVWFK GA + L+Y G
Sbjct: 86 YRELELIHARWAMLGALGCITPELLAKSGTQFG-EAVWFKAGAQIFSEGGLDYLGNP--- 141
Query: 79 NLVFAV-------IAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFAL 129
+LV A +++L+G E YR+ G E D L+PG FDPLGLA DPD FA
Sbjct: 142 SLVHAQNIRRHPGRFKVILMGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAE 201
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LKVKEIKNGRLAMF+M GFF+QA VTG+GP++NL HLS+P NN
Sbjct: 202 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLDDHLSNPTVNN 246
>gi|109389998|gb|ABG29728.1| chloroplast chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 105/158 (66%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
++IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 QVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP+ FA LKVKEIK
Sbjct: 158 ILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKEIK 217
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 NGRLAMFSMFGFFAQAIVTGKGPLENLADHLADPVNNN 255
>gi|146150144|gb|ABQ02463.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 263
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 155 ILAIWASQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
G LAMF+M GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 215 GSLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVNNN 251
>gi|31323256|gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]
Length = 273
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 105/158 (66%), Gaps = 7/158 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ A+ A +++L+G E YR+ L ED L+PGG FDPLGLA DP FA LKVKEIK
Sbjct: 158 ILAIWATQVILMGAVEGYRVPGDGPLGEAEDLLYPGGSFDPLGLATDPVAFAELKVKEIK 217
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 218 NGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|2645999|gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
ginseng]
Length = 266
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKE+KN
Sbjct: 158 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA L+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLENLADPLADPVNNN 254
>gi|116779839|gb|ABK21446.1| unknown [Picea sitchensis]
Length = 266
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPANNN 254
>gi|388515841|gb|AFK45982.1| unknown [Lotus japonicus]
Length = 265
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE + G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILERNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|115797|sp|P27520.1|CB215_PEA RecName: Full=Chlorophyll a-b binding protein 215, chloroplastic;
AltName: Full=LHCII type II CAB-215; Short=LHCP; Flags:
Precursor
gi|20658|emb|CAA40365.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 265
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|56809381|gb|AAW31512.1| light-harvesting chlorophyll-a/b binding protein Lhcb2 [Pisum
sativum]
Length = 265
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP++NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
>gi|116782134|gb|ABK22382.1| unknown [Picea sitchensis]
gi|116783875|gb|ABK23122.1| unknown [Picea sitchensis]
gi|116792700|gb|ABK26462.1| unknown [Picea sitchensis]
gi|148905950|gb|ABR16136.1| unknown [Picea sitchensis]
gi|224285016|gb|ACN40237.1| unknown [Picea sitchensis]
Length = 266
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 158 ILAIWAFQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPANNN 254
>gi|388514477|gb|AFK45300.1| unknown [Medicago truncatula]
Length = 265
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILEKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 157 ILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VT +GPV+NL H++DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTDKGPVQNLYDHVADPVANN 253
>gi|302810440|ref|XP_002986911.1| light-harvesting complex [Selaginella moellendorffii]
gi|300145316|gb|EFJ11993.1| light-harvesting complex [Selaginella moellendorffii]
Length = 267
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHSRWAMLGALGCVTPELLAKNGIKFG-EAVWFKAGSQIFKEGGLDYLGNPNLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G E DK++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 159 ILAIWASQVILMGAVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDTFAELKVKELKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF QA VTG+GP+ENL HL +P NN
Sbjct: 219 GRLAMFSMFGFFTQAIVTGKGPIENLLDHLDNPTVNN 255
>gi|115779|sp|P12471.1|CB21_SOYBN RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|169933|gb|AAA33949.1| chlorophyll a/b-binding protein precursor, partial [Glycine max]
Length = 245
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EA WFK G+ + L+Y G I
Sbjct: 78 EVIHSRWAMLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQS 136
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPL LA DP+ FA LKVKEIKN
Sbjct: 137 ILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKN 196
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL++P NN
Sbjct: 197 GRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
>gi|3386569|gb|AAC28490.1| photosystem II type II chlorophyll a/b binding protein [Sorghum
bicolor]
Length = 191
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE K G G EAVWFK GA + L+Y G +
Sbjct: 24 EVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 82
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 83 ILAIWACQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKN 142
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 143 GRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 179
>gi|115789|sp|P04780.1|CB22_PETSP RecName: Full=Chlorophyll a-b binding protein 22L, chloroplastic;
AltName: Full=LHCII type I CAB-22L; Short=LHCP; Flags:
Precursor
gi|20475|emb|CAA26212.1| unnamed protein product [Petunia sp.]
Length = 267
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G +
Sbjct: 100 EVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G + D L+PGG FDPLGLA+DP+ FA LKVKE KN
Sbjct: 159 ILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL DP NN
Sbjct: 219 GRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNN 255
>gi|169061|gb|AAA33655.1| chlorophyll a/b-binding protein [Pisum sativum]
Length = 194
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T S + + E+IH+RWAMLGA G + PE + G G EAVWFK G+ +
Sbjct: 13 LSADPETFSKN--RELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSE 69
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLA 121
L+Y G + + V A +++L+G E YRI G ++ D L+PGG FDPLGLA
Sbjct: 70 GGLDYLGNPSLVHAQSILTVWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 129
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+ P+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 130 EIPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNN 182
>gi|3560529|gb|AAC34983.1| light harvesting chlorophyll A/B binding protein [Prunus persica]
Length = 265
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 98 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAM +M GFF+QA VTG+GPVENL H++DP ANN
Sbjct: 217 GRLAMTSMFGFFVQAIVTGKGPVENLYDHVADPVANN 253
>gi|21419|emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
Length = 267
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWA+L G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 100 EVIHCRWAILERLGCVFPELLSRNGVKFG-EAVWFKVGSQIFSEGGLDYLGNPSLVHAQS 158
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 159 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 218
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 219 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
>gi|297835814|ref|XP_002885789.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297331629|gb|EFH62048.1| Lhcb2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>gi|224381552|gb|ACN41907.1| chlorophyll A/B binding protein [Gardenia jasminoides]
Length = 264
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAM GA G + PE ++ G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHCRWAMPGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFQEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA P+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADVPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
>gi|18254|emb|CAA49209.1| a/b binding protein [Pyrobotrys stellata]
Length = 254
Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 107/164 (65%), Gaps = 5/164 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWA+LGA G ++PE + G + VWFK GA + LNY G +
Sbjct: 85 YRQLELIHARWALLGALGCVVPELLARNGVAMPADGVWFKVGAEIFKEGGLNYLGNENLV 144
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ +V ++ ++VL+G AE YRI G E D L+PGG FDPLGLA DPD A LKVK
Sbjct: 145 HAQSIVATLLVQLVLMGWAEGYRINGGPLGEGLDPLYPGGAFDPLGLADDPDTLAELKVK 204
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
E+KNGR+AM AM GF +QA VT +GP+ENLA HL+ P NN+ +
Sbjct: 205 ELKNGRMAMAAMFGFLVQAIVTQKGPLENLADHLAAPGTNNVFS 248
>gi|90288037|gb|ABD92879.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 264
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGGAFDPLGLADDPEAFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+D ANN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADLAANN 252
>gi|2570513|gb|AAB82142.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 263
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI---PIN 79
E+IH+RWAMLGA G PE +K G N G EAVWFK GA + L+Y G P +
Sbjct: 96 EVIHSRWAMLGALGCFFPEILSKNGVNFG-EAVWFKAGAQIFSEGGLDYLGNPALVRPQS 154
Query: 80 LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
++ ++VL+G E YR+ G E DK++PGG FD LGLA+DPD FA KVKE N
Sbjct: 155 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDHLGLAEDPDTFAEFKVKEFNN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+MLGFF+QA VTG+GP+EN H++DP ANN
Sbjct: 215 GRLAMFSMLGFFVQAIVTGKGPIENFFDHVADPVANN 251
>gi|15224465|ref|NP_178582.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
gi|4741946|gb|AAD28770.1|AF134123_1 Lhcb2 protein [Arabidopsis thaliana]
gi|4585935|gb|AAD25595.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15809901|gb|AAL06878.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|17064974|gb|AAL32641.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|17978863|gb|AAL47403.1| At2g05070/F1O13.20 [Arabidopsis thaliana]
gi|20260048|gb|AAM13371.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250799|gb|AEC05893.1| photosystem II light harvesting complex protein 2.2 [Arabidopsis
thaliana]
Length = 265
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>gi|67772801|gb|AAY81729.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus gerardiana]
Length = 253
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
GRLAMF+M GFF+QA VTG+GP+ENLA HL+
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLA 253
>gi|357121229|ref|XP_003562323.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Brachypodium distachyon]
Length = 263
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 155 ILAIWACQVVLMGFIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPDTAAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL H++DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPVENLFDHVADPVNNN 251
>gi|4741948|gb|AAD28771.1|AF134124_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>gi|15224471|ref|NP_178585.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
gi|4874296|gb|AAD31358.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|15450349|gb|AAK96468.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|15450494|gb|AAK96540.1| At2g05100/F15L11.2 [Arabidopsis thaliana]
gi|25054901|gb|AAN71932.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330250800|gb|AEC05894.1| photosystem II light harvesting complex protein 2.1 [Arabidopsis
thaliana]
Length = 265
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>gi|53627198|gb|AAU89250.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus echinata]
Length = 253
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
GRLAMF+M GFF+QA VTG+GP+ENLA HL+
Sbjct: 223 GRLAMFSMFGFFVQAIVTGKGPIENLADHLA 253
>gi|4741944|gb|AAD28769.1|AF134122_1 Lhcb2 protein [Arabidopsis thaliana]
Length = 265
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 157 ILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
>gi|87313189|gb|ABD37891.1| light-harvesting chlorophyll-a/b binding protein Lhcb5 [Mesostigma
viride]
Length = 280
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN-TLNYFGKNIP 77
Y+ YE++H RWAMLG G ++PE G AVW+ +GA+LLD + TL + G P
Sbjct: 105 YRPYEVLHGRWAMLGVVGMLVPEGLYANGNTNIKGAVWWDSGAVLLDPSATLTWAGIPNP 164
Query: 78 INLVFAVIAEIVLVGGAEYYRITN----GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ L AVI E+ + E YR G L D L+PGG FDPLGLA DP + LKV
Sbjct: 165 VPLALAVIFEVAVFFLIENYRYQQDGPWGTGL-DPLYPGGKYFDPLGLASDPSKADELKV 223
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
KEIKNGRLAM A LGF +Q +VT EGP N +KHL+DPF N LT++ +ER PTL
Sbjct: 224 KEIKNGRLAMMAFLGFVVQYFVTKEGPYANWSKHLADPFGYNFLTILGSGSERVPTL 280
>gi|312281813|dbj|BAJ33772.1| unnamed protein product [Thellungiella halophila]
Length = 266
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 158 ILAIWASQVVLMGLIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 254
>gi|346987813|gb|AEO51757.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 265
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWATQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA V G+GP+ENL+ L+ P ANN
Sbjct: 217 GRLAMFSMFGFFVQAIVPGKGPIENLSDPLAAPVANN 253
>gi|297815030|ref|XP_002875398.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321236|gb|EFH51657.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGSPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 158 ILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254
>gi|193875804|gb|ACF24538.1| light harvesting complex protein LHCII-3 [Gymnochlora stellata]
Length = 300
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 108/168 (64%), Gaps = 15/168 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G I PE N G N VWFK G + + N ++Y G
Sbjct: 134 YRETEVIHARWAMLGALGCIFPELLNSAGFNL---PVWFKAGGTIFE-NGIDYLGNP--- 186
Query: 79 NLVFAVIA------EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALL 130
NLV A A ++VL+G +E YR G + D L+PGG FDPLG AKDP + A L
Sbjct: 187 NLVHAQSALAVLSVQVVLMGASEAYRFNGGPLGEPADVLYPGGAFDPLGFAKDPSKAAEL 246
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
KVKEIKNGRLAM AMLG+++QA TG+GP+ENL++HL+DP NN V
Sbjct: 247 KVKEIKNGRLAMTAMLGYYVQALATGKGPIENLSEHLADPSKNNGFAV 294
>gi|115775|sp|P10049.1|CB21_PINTH RecName: Full=Chlorophyll a-b binding protein type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|20935|emb|CAA31773.1| chlorophylla/b-binding preprotein (AA -37 to 229) [Pinus
thunbergii]
Length = 266
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 112/173 (64%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
VSA +T + + + E+IH RWAMLGA G + PE K G G EAVWFK GA +
Sbjct: 85 VSADPETFAKN--RELEVIHCRWAMLGALGCVFPELLAKNGLKFG-EAVWFKAGAQIFSE 141
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G I + A+ A ++VL+G E YR+ G E D L PGG FDPLGLA
Sbjct: 142 GGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLA 201
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DP+ A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 202 DDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
>gi|145079746|tpg|DAA05928.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Mesostigma viride]
Length = 287
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN-TLNYFGKNIP 77
Y+ YE++H RWAMLG G ++PE G AVW+ +GA+LLD + TL + G P
Sbjct: 112 YRPYEVLHGRWAMLGVVGMLVPEGLYANGNTNIKGAVWWDSGAVLLDPSATLTWAGIPNP 171
Query: 78 INLVFAVIAEIVLVGGAEYYRITN----GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ L AVI E+ + E YR G L D L+PGG FDPLGLA DP + LKV
Sbjct: 172 VPLALAVIFEVAVFFLIENYRYQQDGPWGTGL-DPLYPGGKYFDPLGLASDPSKADELKV 230
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
KEIKNGRLAM A LGF +Q +VT EGP N +KHL+DPF N LT++ +ER PTL
Sbjct: 231 KEIKNGRLAMMAFLGFVVQYFVTKEGPYANWSKHLADPFGYNFLTILGSGSERVPTL 287
>gi|15232249|ref|NP_189406.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
gi|4741950|gb|AAD28772.1|AF134125_1 Lhcb2 protein [Arabidopsis thaliana]
gi|13899125|gb|AAK48984.1|AF370557_1 light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|9294474|dbj|BAB02693.1| light harvesting chlorophyll a/b-binding protein [Arabidopsis
thaliana]
gi|30023746|gb|AAP13406.1| At3g27700 [Arabidopsis thaliana]
gi|332643831|gb|AEE77352.1| photosystem II light harvesting complex protein 2.3 [Arabidopsis
thaliana]
Length = 266
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 158 ILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPIENLFDHIADPVANN 254
>gi|115773|sp|P04159.1|CB21_PEA RecName: Full=Chlorophyll a-b binding protein AB96; AltName:
Full=LHCII type I CAB-AB96; Short=LHCP; AltName:
Full=Major 15
gi|169051|gb|AAA33650.1| polypeptide 15 precursor, partial [Pisum sativum]
Length = 228
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G +
Sbjct: 61 EVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 119
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+ P+ FA LKVKE+KN
Sbjct: 120 ILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKN 179
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+ A VTG+GP+ENLA HL+DP NN
Sbjct: 180 GRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
>gi|115828|sp|P20865.1|CB2_DUNSA RecName: Full=Chlorophyll a-b binding protein of LHCII type I,
chloroplastic; Short=CAB; Short=LHCP; Flags: Precursor
gi|167987|gb|AAA33278.1| major chlorophyll binding protein [Dunaliella salina]
Length = 273
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 105/162 (64%), Gaps = 6/162 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAF-NKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ ELIHAR +LGA G + PE ++ G G A+WFK GA + LNY G
Sbjct: 101 YRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSL 160
Query: 78 I---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKV 132
I N+V + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKV
Sbjct: 161 IHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKV 220
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMFA LGFF+QA VTG+GP+ENL HL++P NN
Sbjct: 221 KEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENN 262
>gi|53627228|gb|AAU89265.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Picea sitchensis]
Length = 253
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 104 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 162
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 163 ILAIWACQVILMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKN 222
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
GRLAMF+M GFF QA VTG+GP+ENLA HL+
Sbjct: 223 GRLAMFSMFGFFXQAIVTGKGPIENLADHLA 253
>gi|307110329|gb|EFN58565.1| hypothetical protein CHLNCDRAFT_59584 [Chlorella variabilis]
Length = 249
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 112/177 (63%), Gaps = 12/177 (6%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA QT + Y+ E+IHARWAMLGA G ++PE + G N WF GA +
Sbjct: 74 LSADPQTFAR--YREIEVIHARWAMLGALGCVVPELLD--GTN---HIAWFNAGATIFSD 126
Query: 67 NTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
+ L Y G IN +V +I +++L+ E YR+ G D ++PGG FDPLGLA
Sbjct: 127 DGLQYLGIPGLINAKSIVATLIVQVILMSYVEGYRVNGGPAGTGLDAVYPGGSFDPLGLA 186
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
DPD F+ LKVKEIKNGRLAM +M GFF+QA VTGEGP+ENL KHL+D ANN ++
Sbjct: 187 DDPDTFSELKVKEIKNGRLAMLSMFGFFIQAIVTGEGPIENLNKHLADASANNFYSL 243
>gi|115786|sp|P06671.1|CB22_MAIZE RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|22357|emb|CAA68451.1| LHCP [Zea mays]
Length = 265
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 104/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ F LKVKE+K
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKVKELKK 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAM +M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 217 GRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
>gi|297815028|ref|XP_002875397.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
gi|297321235|gb|EFH51656.1| LHCB2:4 [Arabidopsis lyrata subsp. lyrata]
Length = 266
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 99 EVIHSRWAMLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KN
Sbjct: 158 ILAIWACQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 218 GRLAMFPMFGFFVQAIVTGKGPIENLFDHIADPVANN 254
>gi|115782|sp|P04784.1|CB21_WHEAT RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
Precursor
gi|170674|gb|AAA34260.1| chlorophyll a/b-binding protein precursor [Triticum aestivum]
Length = 266
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 105/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EA WFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA+ P FA LKVKEIKN
Sbjct: 158 LLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+E+LA H++DP NN
Sbjct: 218 GRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
>gi|974850|emb|CAA61432.1| LHCII type I protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 104/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA+ P F LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGRFDPLGLAERPQAFDALKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GF +QA VTG+GP+ENLA H++DP NN
Sbjct: 218 GRLAMFSMFGFLVQAIVTGKGPLENLADHIADPVNNN 254
>gi|67772803|gb|AAY81730.1| chloroplast putative light harvesting chlorophyll a/b binding
protein, partial [Pinus krempfii]
Length = 250
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 102/149 (68%), Gaps = 6/149 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 103 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 161
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKE+KN
Sbjct: 162 ILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKELKN 221
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
GRLAMF+M GFF+QA VTG+GP+ENLA H
Sbjct: 222 GRLAMFSMFGFFVQAIVTGKGPIENLADH 250
>gi|159484394|ref|XP_001700243.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
gi|158272559|gb|EDO98358.1| chlorophyll a-b binding protein of LHCII [Chlamydomonas
reinhardtii]
Length = 266
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G I PE +G G EAVWFK GA + L+Y G +
Sbjct: 86 YRELELIHARWAMLGALGCIFPELLGSYGVPFG-EAVWFKAGAQIFQEGGLDYLGNPNLV 144
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ +++L+G E YR+ G E DKL+PGG FDPLGLA DPD FA LKVK
Sbjct: 145 HAQSILAILGTQVLLMGAIEGYRVNGGPLGEGLDKLYPGGSFDPLGLADDPDTFAELKVK 204
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
EIKNGRLAMF+M GFF+QA VTG+GP++NL
Sbjct: 205 EIKNGRLAMFSMFGFFVQAIVTGKGPLQNL 234
>gi|330318814|gb|AEC11067.1| chlorophyll a/b binding protein [Camellia sinensis]
Length = 107
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 84/105 (80%)
Query: 85 IAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
+ E VGGAEY NGL+LEDKLHP GPFDPLGLAKDPDQ A+LKVKEIKNGRL MF
Sbjct: 3 LPEGGFVGGAEYSSFLNGLNLEDKLHPSGPFDPLGLAKDPDQGAILKVKEIKNGRLTMFP 62
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPTL 189
+LGFF+QA VTGEGPVE LAKH+ DPFAN LT ++G ERA TL
Sbjct: 63 ILGFFIQASVTGEGPVEKLAKHVRDPFANKDLTKLAGFEERASTL 107
>gi|162461878|ref|NP_001105427.1| light harvesting chlorophyll a /b binding protein [Zea mays]
gi|22230|emb|CAA37474.1| light harvesting chlorophyll a /b binding protein [Zea mays]
Length = 265
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAV FK G+ + L+Y G I
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVGFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+K
Sbjct: 157 ILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKK 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
>gi|326510279|dbj|BAJ87356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 52 EVIHSRWAMLGALGCVFPEILSKNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 110
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 111 ILAIWACQVVLMGFIEGYRVGGGPLGEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKN 170
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL H++DP NN
Sbjct: 171 GRLAMFSMFGFFVQAIVTGKGPVENLFDHIADPVNNN 207
>gi|1661160|gb|AAB18404.1| chlorophyll a/b binding protein [Oryza sativa Indica Group]
Length = 265
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 102/157 (64%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 156
Query: 81 VFAVI-AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ ++V +G E YR+ G ++ D L+PGG DPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWGCQVVFMGAVEGYRVAGGPLGEVVDPLYPGGSLDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAM +M GFF+QA VTG+GP+EN+ HL+DP NN
Sbjct: 217 GRLAMLSMFGFFVQAIVTGKGPLENITDHLADPVNNN 253
>gi|307103850|gb|EFN52107.1| hypothetical protein CHLNCDRAFT_32733 [Chlorella variabilis]
Length = 255
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 10/161 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ E+IHARWAMLGA G I PE K+ EAVWFK GA + LNY G +
Sbjct: 82 FRTVEVIHARWAMLGALGCIFPEVLEKYSGVEFGEAVWFKAGAQIFADGGLNYLGNPGLV 141
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGL------DLEDKLHPGGPFDPLGLAKDPDQFAL 129
+ +V ++ +++L+G E YR NG + +D L+PGG FDPLGLA DPD A
Sbjct: 142 HAQSIVATLVVQVLLMGAVEIYR-ANGEGPSGFGEGQDNLYPGGAFDPLGLADDPDTLAE 200
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
LKVKE+KNGRLAM +MLGFF+QA VTG+GP++NL HL +P
Sbjct: 201 LKVKELKNGRLAMMSMLGFFVQAIVTGKGPLDNLLTHLEEP 241
>gi|359495476|ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
gi|147801944|emb|CAN77327.1| hypothetical protein VITISV_001096 [Vitis vinifera]
Length = 269
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 97 RALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 156
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E YRI G+ + L+PGGP FDPLGLA DP FA LKVK
Sbjct: 157 AQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTFAELKVK 216
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 217 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 257
>gi|359495474|ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 269
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 97 RALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 156
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E YRI G+ + L+PGGP FDPLGLA DP FA LKVK
Sbjct: 157 AQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGGPYFDPLGLADDPVTFAELKVK 216
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 217 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 257
>gi|209868183|gb|ACI90631.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus bungeana]
Length = 254
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 109 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 167
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 168 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 227
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAMF+M GFF+QA VTG+GP+ENLA
Sbjct: 228 GRLAMFSMFGFFVQAIVTGKGPIENLA 254
>gi|209868191|gb|ACI90635.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus yunnanensis]
Length = 254
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 101/147 (68%), Gaps = 6/147 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 109 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 167
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 168 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 227
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAMF+M GFF+QA VTG+GP+ENLA
Sbjct: 228 GRLAMFSMFGFFVQAIVTGKGPIENLA 254
>gi|209868185|gb|ACI90632.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis var. henryi]
gi|209868187|gb|ACI90633.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus hwangshanensis]
gi|209868189|gb|ACI90634.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus tabuliformis]
Length = 254
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 109 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 167
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 168 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 227
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAMF+M GFF+QA VTG+GP+ENLA
Sbjct: 228 GRLAMFSMFGFFVQAIVTGKGPIENLA 254
>gi|125558806|gb|EAZ04342.1| hypothetical protein OsI_26482 [Oryza sativa Indica Group]
Length = 266
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 94 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVH 153
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E YRI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 154 AQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVK 213
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLADPVANN 254
>gi|115472785|ref|NP_001059991.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|34393384|dbj|BAC83393.1| putative chlorophyll A-B binding protein of LHCII type III,
chloroplast precursor (CAB) [Oryza sativa Japonica
Group]
gi|113611527|dbj|BAF21905.1| Os07g0562700 [Oryza sativa Japonica Group]
gi|125600722|gb|EAZ40298.1| hypothetical protein OsJ_24743 [Oryza sativa Japonica Group]
gi|215678934|dbj|BAG96364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679381|dbj|BAG96521.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692555|dbj|BAG87975.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737394|dbj|BAG96323.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737576|dbj|BAG96706.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737599|dbj|BAG96729.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767446|dbj|BAG99674.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767453|dbj|BAG99681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 266
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 105/161 (65%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 94 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSDGGLDYLGNPNLVH 153
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E YRI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 154 AQSILAVLGFQVVLMGLVEGYRINGLPGVGDGNDLYPGGQYFDPLGLADDPVTFAELKVK 213
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLADPVANN 254
>gi|209868193|gb|ACI90636.1| chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus massoniana]
Length = 233
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 88 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 146
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 147 ILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPDAFAELKVKEIKN 206
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAMF+M GFF+QA VTG+GP+ENLA
Sbjct: 207 GRLAMFSMFGFFVQAIVTGKGPIENLA 233
>gi|168053612|ref|XP_001779229.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669328|gb|EDQ55917.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A ELIH RWAMLGA G I PE K+ E VWFK GA + L+Y G I
Sbjct: 94 RALELIHGRWAMLGALGCITPELLQKYSRVTLKEPVWFKAGAQIFSDGGLDYLGNPNLIH 153
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGL---DLEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV A ++VL+G E YR TNGL L+PGG FDPLGLA DP+ A LKV
Sbjct: 154 AQSILAVWAVQVVLMGAVEAYR-TNGLPGVGEGGDLYPGGKYFDPLGLADDPETLAELKV 212
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KE+KNGRLAMF+M GFF+QA VTG+GP+ENL HL++P +NN
Sbjct: 213 KELKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLANPVSNN 254
>gi|225690804|gb|ACO06088.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 263
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 104/157 (66%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G +
Sbjct: 96 EVIHSRWAMLGALGCVFPEILSKNGIKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 154
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD A LKVKE+KN
Sbjct: 155 ILAIWAVQVVLMGFIEGYRVGGGPLDEGLDIIYPGGAFDPLGLADDPDTAAELKVKELKN 214
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GPVENL L DP NN
Sbjct: 215 GRLAMFSMFGFFVQAIVTGKGPVENLFDQLRDPGNNN 251
>gi|242045970|ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
gi|241924233|gb|EER97377.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
Length = 268
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 96 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 155
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 156 AQSILAVLGFQVILMGLVEGFRI-NGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKV 214
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 215 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 256
>gi|414887113|tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 1
[Zea mays]
gi|414887114|tpg|DAA63128.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 2
[Zea mays]
Length = 269
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 97 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 156
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 157 AQSILAVLGFQVILMGLVEGFRI-NGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKV 215
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 216 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 257
>gi|226509520|ref|NP_001150523.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195613464|gb|ACG28562.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195639878|gb|ACG39407.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
Length = 272
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 100 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 159
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 160 AQSILAVLGFQVILMGLVEGFRI-NGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKV 218
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 219 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 260
>gi|374434016|gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [Wolffia
australiana]
Length = 264
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 92 RALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 151
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 152 AQSILAVLGFQVLLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 210
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 211 KEIKNGRLAMFSMFGFFIQAIVTGKGPLENLLDHLDDPVANN 252
>gi|62733871|gb|AAX95980.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group]
gi|108864187|gb|ABA92339.2| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 245
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/87 (89%), Positives = 81/87 (93%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +I
Sbjct: 111 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 170
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNGL 103
PINL+ AV AE+VLVGGAEYYRI NGL
Sbjct: 171 PINLIVAVAAEVVLVGGAEYYRIINGL 197
>gi|307106008|gb|EFN54255.1| hypothetical protein CHLNCDRAFT_56227 [Chlorella variabilis]
Length = 248
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 103/167 (61%), Gaps = 5/167 (2%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE G EAVWFK GA + L+Y G I
Sbjct: 74 YRELEVIHARWAMLGALGCVTPELLQNNGVASFGEAVWFKAGAQIFQEGGLDYLGNPSLI 133
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ +V ++ ++ L+G E YR+ G E D L+PG FDPLGLA DPD F+ LKVK
Sbjct: 134 HAQSIVAVLLTQLTLMGLIEGYRVNGGPAGEGLDALYPGEAFDPLGLADDPDTFSELKVK 193
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
E+KNGRLAM +M GFF+Q VT +GP+ENL HL+ P A N + +
Sbjct: 194 ELKNGRLAMVSMFGFFVQGIVTKKGPIENLNDHLASPDATNFWAIYA 240
>gi|384250359|gb|EIE23838.1| hypothetical protein COCSUDRAFT_28488 [Coccomyxa subellipsoidea
C-169]
Length = 275
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 103/165 (62%), Gaps = 14/165 (8%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S Y+ E+IHARWAMLGA G ++PE ++ WF GA + + Y G +
Sbjct: 108 SRYREIEVIHARWAMLGALGIVVPELLDQTN-----HVAWFDAGATIFGPKGIQYLG--V 160
Query: 77 P-----INLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFAL 129
P N++ V +++L+G E YR+ G E DK++PG FDPLGLA DPD FA
Sbjct: 161 PGLINAKNIIATVAVQVILMGAIEGYRVNGGPAGEGLDKVYPGESFDPLGLADDPDTFAE 220
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LKVKEIKNGRLAMF+ GFF+QA VTG+GP+ NL HL++P NN
Sbjct: 221 LKVKEIKNGRLAMFSNFGFFVQAIVTGKGPIANLNDHLANPTVNN 265
>gi|145079253|tpg|DAA05906.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm8 [Acetabularia acetabulum]
Length = 220
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 105/159 (66%), Gaps = 7/159 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+SA +T A Y+ ELIHARWAMLGA G + PE +K+G E+VWFK G+ +
Sbjct: 64 LSADPETFKA--YREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQE 121
Query: 67 NTLNYFGKN--IPINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G + I + A++ ++VL+G E YR+ G E D LHPG FDPLGLA
Sbjct: 122 GGLDYLGNSNLIHAQSILAILGCQVVLMGLIEAYRVNGGPLGEGLDPLHPGDKFDPLGLA 181
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPV 160
DPD FA LKVKEIKNGRLAMF+M GF++QA VTG+GP+
Sbjct: 182 DDPDTFAELKVKEIKNGRLAMFSMFGFYVQAIVTGKGPI 220
>gi|357122389|ref|XP_003562898.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Brachypodium distachyon]
Length = 267
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 107/162 (66%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G + PE K+ E VWFK GA + L+Y G +
Sbjct: 95 RALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 154
Query: 78 INLVFAVI-AEIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ ++++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 155 AQSILAVLGSQVLLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 213
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 255
>gi|359807444|ref|NP_001240880.1| uncharacterized protein LOC100779387 [Glycine max]
gi|255646132|gb|ACU23552.1| unknown [Glycine max]
Length = 268
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 96 RALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 155
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E YRI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 156 AQSILAVLGFQVILMGLVEGYRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 214
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 215 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 256
>gi|359806176|ref|NP_001241200.1| uncharacterized protein LOC100790960 [Glycine max]
gi|255635333|gb|ACU18020.1| unknown [Glycine max]
Length = 267
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 95 RALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 154
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E YRI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 155 AQSILAVLGFQVILMGLVEGYRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 213
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 214 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 255
>gi|156890564|gb|ABU96692.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 95 RALEVIHGRWAMLGALGCITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 154
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +++L+G E YRI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 155 AQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVK 214
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL H+ +P ANN
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANN 255
>gi|4689380|gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
Length = 269
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 97 RALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 156
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ ++VL+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 157 AQSILAVLGFQVVLMGLVEGFRI-NGLDGVGEGNNLYPGGQYFDPLGLADDPATFAELKV 215
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 216 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 257
>gi|160713965|gb|ABX47018.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Bambusa
oldhamii]
Length = 267
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 95 RALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 154
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +++L+G E YRI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 155 AQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVK 214
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 255
>gi|449463148|ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
gi|449532805|ref|XP_004173369.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Cucumis sativus]
Length = 264
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 92 RALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVH 151
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ ++VL+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 152 AQSILAVLGFQVVLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 210
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 211 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 252
>gi|115793|sp|P27523.1|CB23_HORVU RecName: Full=Chlorophyll a-b binding protein of LHCII type III,
chloroplastic; Short=CAB; Flags: Precursor
gi|19023|emb|CAA44881.1| type III LHCII CAB precursor protein [Hordeum vulgare]
Length = 268
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G + PE K+ E VWFK G+ + L+Y G +
Sbjct: 96 RALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 155
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 156 AQSILAVLGFQVLLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 214
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 215 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
>gi|312281753|dbj|BAJ33742.1| unnamed protein product [Thellungiella halophila]
Length = 265
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 93 RALEVIHGRWAMLGAFGCITPEVLQKWVRVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 153 AQSILAVLGFQVILMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 211
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL H+ DP ANN
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDDPVANN 253
>gi|224117282|ref|XP_002317529.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222860594|gb|EEE98141.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 91 RALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 150
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 151 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVK 210
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 251
>gi|160713967|gb|ABX47019.1| chloroplast chlorophyll a/b binding protein cab-BO3-1 [Bambusa
oldhamii]
Length = 267
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 95 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 154
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +++L+G E YRI G+ + L+PGG FDPLGLA DP FA L+VK
Sbjct: 155 AQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELRVK 214
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 215 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 255
>gi|115794|sp|P27489.1|CB23_SOLLC RecName: Full=Chlorophyll a-b binding protein 13, chloroplastic;
AltName: Full=LHCII type III CAB-13; Flags: Precursor
gi|19277|emb|CAA42818.1| LHCII type III [Solanum lycopersicum]
Length = 265
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 93 RALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVH 152
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 153 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVK 212
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>gi|157987285|gb|ABW07804.1| light-harvesting chlorphyll binding protein 3 [Solenostemon
scutellarioides]
Length = 193
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 20 RALEVIHGRWAMLGALGCITPEVLQKWLNVTFKEPVWFKAGAQIFTEGGLDYLGNPNLVH 79
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ ++V++G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 80 AQSILAVLGFQVVVMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 138
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 139 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 180
>gi|224122902|ref|XP_002330392.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
gi|222871777|gb|EEF08908.1| light-harvesting complex II protein Lhcb3 [Populus trichocarpa]
Length = 263
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 91 RALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 150
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 151 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPATFAELKVK 210
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 251
>gi|260914751|gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
Length = 261
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/145 (55%), Positives = 98/145 (67%), Gaps = 6/145 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE +K G G EAVWFK GA + L+Y G I
Sbjct: 98 EVIHCRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E D ++PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 157 ILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVEN 162
GRLAMF+M GFF+QA VTG+GP+EN
Sbjct: 217 GRLAMFSMFGFFVQAIVTGKGPIEN 241
>gi|255569585|ref|XP_002525758.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223534908|gb|EEF36594.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 268
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 96 RALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 155
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 156 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVK 215
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 216 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 256
>gi|452341|emb|CAA48641.1| type II light-harvesting chlorophyll a /b-binding protein [Zea
mays]
Length = 229
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 114/173 (65%), Gaps = 8/173 (4%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
VSA +T + + + E+IH+RWAMLGA G + PE K G G EAVWFK GA +
Sbjct: 48 VSADPETFARN--RELEVIHSRWAMLGALGCVFPEILAKNGVKFG-EAVWFKAGAQIFSE 104
Query: 67 NTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLA 121
L+Y G + + A+ A ++VL+G E Y + G E DK++PGG F+PLGLA
Sbjct: 105 GGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYGVGGGPLGEGLDKVYPGGAFEPLGLA 164
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
DPD A LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 165 DDPDTAAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANN 217
>gi|297792877|ref|XP_002864323.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
gi|297310158|gb|EFH40582.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata]
Length = 265
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 93 RALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 153 AQSILAVLGFQVILMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 211
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>gi|15239602|ref|NP_200238.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
gi|4741952|gb|AAD28773.1|AF134126_1 Lhcb3 protein [Arabidopsis thaliana]
gi|5002210|gb|AAD37362.1|AF143691_1 type III chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|13605754|gb|AAK32870.1|AF361858_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|13926339|gb|AAK49633.1|AF372917_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|9759500|dbj|BAB10750.1| Lhcb3 chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|16323262|gb|AAL15365.1| AT5g54270/MDK4_9 [Arabidopsis thaliana]
gi|332009094|gb|AED96477.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana]
Length = 265
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 106/162 (65%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 93 RALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 153 AQSILAVLGFQVILMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 211
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 212 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>gi|371721828|gb|AEX55237.1| chloroplast chlorophyll a/b binding protein cab-BO3 [Allium
sativum]
Length = 261
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 89 RALEVIHGRWAMLGALGCITPEVLQKWVNVNFKEPVWFKAGAQIFSQGGLDYLGNPNLVH 148
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 149 AQSILAVLGFQVLLMGAVEGFRI-NGLDGVGNGNDLYPGGQYFDPLGLADDPVTFAELKV 207
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+EN HL +P ANN
Sbjct: 208 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENWLDHLDNPVANN 249
>gi|48375048|gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nicotiana tabacum]
Length = 199
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 27 RALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 86
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 87 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPTTFAELKVK 146
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 147 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 187
>gi|118489712|gb|ABK96657.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 224
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 52 RALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 111
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 112 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVK 171
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 172 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 212
>gi|116783114|gb|ABK22798.1| unknown [Picea sitchensis]
Length = 253
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 30 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA- 86
AMLGA G + PE K G G EAVWFK GA + L+Y G I + A+ A
Sbjct: 93 AMLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAS 151
Query: 87 EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+
Sbjct: 152 QVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFS 211
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 212 MFGFFVQAIVTGKGPIENLFDHLADPTANN 241
>gi|20671|emb|CAA49149.1| chlorophyll a/b-binding protein [Pisum sativum]
gi|141448064|gb|ABO87611.1| chloroplast chlorophyll-a/b binding protein [Pisum sativum]
Length = 265
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 93 RALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLED--KLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +IVL+G E +RI D+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 153 AQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTFAELKVK 212
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>gi|157987283|gb|ABW07803.1| chlorophyll A-B binding protein [Solenostemon scutellarioides]
Length = 170
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 102/147 (69%), Gaps = 6/147 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I
Sbjct: 21 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQS 79
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YR+ G E DK++PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 80 ILAIWASQVVLMGLIEGYRVGGGPLGEGLDKVYPGGSFDPLGLADDPEAFAELKVKELKN 139
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAMF+M GFF+QA VTG+GP+ENL+
Sbjct: 140 GRLAMFSMFGFFVQAIVTGKGPIENLS 166
>gi|56809383|gb|AAW31513.1| light-harvesting chlorophyll-a/b binding protein Lhcb3 [Pisum
sativum]
Length = 265
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 93 RALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 152
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLED--KLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +IVL+G E +RI D+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 153 AQSILAVLGFQIVLMGLVEGFRINGLPDVGEGNDLYPGGQYFDPLGLADDPVTFAELKVK 212
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 213 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
>gi|147860827|emb|CAN83151.1| hypothetical protein VITISV_031291 [Vitis vinifera]
Length = 244
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E +WFK GA + L+Y G +
Sbjct: 72 RALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVH 131
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 132 AQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVK 191
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 192 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 232
>gi|225461315|ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Vitis vinifera]
Length = 266
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E +WFK GA + L+Y G +
Sbjct: 94 RALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVH 153
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 154 AQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVK 213
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 254
>gi|326498823|dbj|BAK02397.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508330|dbj|BAJ99432.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 310
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 108/175 (61%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAML A G ++PE + FG E VW+K G L G+TL+Y G IP
Sbjct: 135 YFNFEILHCRWAMLAALGVVVPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLG--IPG 192
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I +++L+ G EY R LE D +PGG FDPLGL+K
Sbjct: 193 FRIAGGQGIIVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSK 252
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F KVKEIKNGRLAM A +GF++QA VTG+GPV+NLA+HLSDP NN+L+
Sbjct: 253 DPVAFEEFKVKEIKNGRLAMVAWIGFYIQAAVTGKGPVQNLAEHLSDPLHNNILS 307
>gi|169124051|gb|ACA47401.1| chloroplast chlorophyll-a/b binding protein [Medicago falcata]
Length = 266
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 94 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 153
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 154 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVK 213
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL H+ +P ANN
Sbjct: 214 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANN 254
>gi|302143082|emb|CBI20377.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E +WFK GA + L+Y G +
Sbjct: 59 RALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLGNPNLVH 118
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 119 AQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPGGQYFDPLGLADDPVTFAELKVK 178
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 179 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 219
>gi|357452427|ref|XP_003596490.1| Chlorophyll a/b-binding protein [Medicago truncatula]
gi|355485538|gb|AES66741.1| Chlorophyll a/b-binding protein [Medicago truncatula]
Length = 264
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 92 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 151
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 152 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVK 211
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL H+ +P ANN
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANN 252
>gi|302854483|ref|XP_002958749.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
gi|300255924|gb|EFJ40205.1| hypothetical protein VOLCADRAFT_108288 [Volvox carteri f.
nagariensis]
Length = 2775
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/146 (52%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
Query: 34 AAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVL 90
A G + PE +K G G EAVWFK GA + L+Y G + N+V + +++L
Sbjct: 2614 ALGCLTPELLSKNGVQFG-EAVWFKAGAQIFQEGGLDYLGNPSLVHAQNIVATLACQVIL 2672
Query: 91 VGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 148
+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GF
Sbjct: 2673 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 2732
Query: 149 FLQAYVTGEGPVENLAKHLSDPFANN 174
F+QA VTG+GP+ENL HL++P NN
Sbjct: 2733 FVQAIVTGKGPIENLNDHLANPAVNN 2758
>gi|375152222|gb|AFA36569.1| putative chlorophyll a/b-binding protein, partial [Lolium perenne]
Length = 206
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 108/175 (61%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAMLGA G ++PE + FG E VW+K G L G+TL+Y G IP
Sbjct: 31 YFNFEILHCRWAMLGALGVVVPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLG--IPG 88
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I + +L+ G EY R LE D +PGG FDPLGL+K
Sbjct: 89 LRIAGGQGIIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGALFDPLGLSK 148
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F LKVKEIKNGRLAM A LGF++QA VTG+GPV+NL +HLSDP NN+L+
Sbjct: 149 DPVAFEELKVKEIKNGRLAMVAWLGFYVQAAVTGKGPVQNLIEHLSDPLHNNILS 203
>gi|388520661|gb|AFK48392.1| unknown [Lotus japonicus]
Length = 270
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 98 RALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 157
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +++L+G E +RI G+ + L+PG FDPLGLA DP FA LKVK
Sbjct: 158 AQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPGDQYFDPLGLADDPATFAELKVK 217
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN
Sbjct: 218 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANN 258
>gi|302765457|ref|XP_002966149.1| light-harvesting complex [Selaginella moellendorffii]
gi|300165569|gb|EFJ32176.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 103/161 (63%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A ELIH RWAMLGA G + PE +K+ E VWFK G+ + L+Y G +
Sbjct: 91 RALELIHGRWAMLGALGCVFPEVLSKWVGVEFKEKVWFKAGSQIFSDGGLDYLGNPNLVH 150
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLED--KLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ A+ A +++L+G E YRI D+ + L+PGG FDPLG A DP+ A LKVK
Sbjct: 151 AQSILAIWACQVILMGLVEGYRINGLPDVGEGGDLYPGGQYFDPLGFADDPETLAELKVK 210
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P NN
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDNPVVNN 251
>gi|357157898|ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Brachypodium distachyon]
Length = 318
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 107/173 (61%), Gaps = 14/173 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG-KNIP 77
Y +E++H RWAML A G +IPE + FG E VW+K G L G+TL+Y G +
Sbjct: 143 YFNFEILHCRWAMLAALGVVIPELLDLFGIVHFVEPVWWKVGYAKLQGDTLDYLGITGLR 202
Query: 78 I----NLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDP 124
I ++ I + +L+ G EY R LE D +PGG FDPLGL+KDP
Sbjct: 203 IAGGQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSKDP 262
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
F LKVKEIKNGRLAM A LGF+LQA VTG+GPV+NL +HLSDP NN+L+
Sbjct: 263 VGFEELKVKEIKNGRLAMVAWLGFYLQAAVTGKGPVQNLVEHLSDPLHNNILS 315
>gi|115478412|ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
gi|50725078|dbj|BAD33211.1| putative chlorophyll a/b-binding protein [Oryza sativa Japonica
Group]
gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa Japonica Group]
Length = 321
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 107/175 (61%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAML A G ++PE + FG E VW+K G L G+TL+Y G IP
Sbjct: 146 YFNFEILHCRWAMLAALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLG--IPG 203
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I + +L+ G EY R LE D +PGG FDPLGL+K
Sbjct: 204 FRIAGGQGVIVIAICQALLMVGPEYARYCGIEALEPLGLYLPGDINYPGGALFDPLGLSK 263
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F LKVKEIKNGRLAM A LGF++QA VTG+GP++NL +HLSDP NN+L+
Sbjct: 264 DPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILS 318
>gi|116789194|gb|ABK25154.1| unknown [Picea sitchensis]
Length = 240
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 98/154 (63%), Gaps = 26/154 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH RWAMLGA G + PE K G G EAVWFK ++
Sbjct: 99 EVIHCRWAMLGALGCVFPELLAKTGVKFG-EAVWFKA---------------------IW 136
Query: 83 AVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 140
A +++VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKNGRL
Sbjct: 137 A--SQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRL 194
Query: 141 AMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
AMF+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 195 AMFSMFGFFVQAIVTGKGPIENLFDHLADPTANN 228
>gi|242044232|ref|XP_002459987.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
gi|241923364|gb|EER96508.1| hypothetical protein SORBIDRAFT_02g020290 [Sorghum bicolor]
Length = 314
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 107/175 (61%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAML A G +IPE + FG E VW+K G L G+TL+Y G IP
Sbjct: 139 YFNFEILHCRWAMLAALGVVIPELLDLFGLVHFVEPVWWKVGYAKLQGDTLDYLG--IPG 196
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I + +L+ G EY R LE D +PGG FDPLGL+K
Sbjct: 197 FRIAGGQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLGLSK 256
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F LKVKEIKNGRLAM A LGF++QA VTG+GPV+NL +HLSDP NN+L+
Sbjct: 257 DPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPVQNLVEHLSDPLHNNILS 311
>gi|6644196|gb|AAF20948.1|AF207690_1 chlorophyll a/b-binding protein [Daucus carota]
Length = 264
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 92 RALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVH 151
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP A LKVK
Sbjct: 152 AQSILAVLGFQVVLMGLVESFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTLAELKVK 211
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 212 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 252
>gi|302800774|ref|XP_002982144.1| light-harvesting complex [Selaginella moellendorffii]
gi|300150160|gb|EFJ16812.1| light-harvesting complex [Selaginella moellendorffii]
Length = 263
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 103/161 (63%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A ELIH RWAMLGA G + PE +K+ E VWFK G+ + L+Y G +
Sbjct: 91 RALELIHGRWAMLGALGCVFPEVLSKWVGVEFKEKVWFKAGSQIFSDGGLDYLGNPNLVH 150
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLED--KLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ A+ A +++L+G E YRI D+ + L+PGG FDPLG A DP+ A LKVK
Sbjct: 151 AQSILAIWACQVILMGLVEGYRINGLPDVGEGGDLYPGGQYFDPLGFADDPETLAELKVK 210
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P NN
Sbjct: 211 EIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDNPVVNN 251
>gi|405617|emb|CAA43804.1| LHCII Type III chlorophyll a/b binding protein [Brassica napus]
Length = 221
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 105/162 (64%), Gaps = 8/162 (4%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 49 RALEVIHGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVH 108
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ +++L+G E RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 109 AQSILAVLGFQVILMGLVEGLRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 167
Query: 133 KEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
KEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 168 KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 209
>gi|414884910|tpg|DAA60924.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 315
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 106/175 (60%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAML A G ++PE + FG E VW+K G L G+ L+Y G IP
Sbjct: 140 YFNFEILHCRWAMLAALGVVVPELLDLFGLVHFVEPVWWKVGYAKLQGDNLDYLG--IPG 197
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
+V I + +L+ G EY R LE D +PGGP FDPLGL+K
Sbjct: 198 FRIAGGQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLGLSK 257
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F LKVKEIKNGRLAM A GF++QA VTG+GPV+NL +HLSDP NN+L+
Sbjct: 258 DPVAFEDLKVKEIKNGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLSDPLNNNILS 312
>gi|125605083|gb|EAZ44119.1| hypothetical protein OsJ_28744 [Oryza sativa Japonica Group]
Length = 245
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 107/175 (61%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAML A G ++PE + FG E VW+K G L G+TL+Y G IP
Sbjct: 70 YFNFEILHCRWAMLAALGVVVPELLDLFGVVHFVEPVWWKVGYAKLQGDTLDYLG--IPG 127
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I + +L+ G EY R LE D +PGG FDPLGL+K
Sbjct: 128 FRIAGGQGVIVIAICQALLMVGPEYARYCGIEALEPLGLYLPGDINYPGGALFDPLGLSK 187
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F LKVKEIKNGRLAM A LGF++QA VTG+GP++NL +HLSDP NN+L+
Sbjct: 188 DPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILS 242
>gi|388507164|gb|AFK41648.1| unknown [Lotus japonicus]
Length = 160
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 99/149 (66%), Gaps = 6/149 (4%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN---LVFAVIAE 87
MLGA G + PE + G G EAVWFK G+ + L+Y G ++ ++ +
Sbjct: 1 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILVIWATQ 59
Query: 88 IVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 60 VILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 119
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG+GP+ENLA HLSDP NN
Sbjct: 120 FGFFVQAIVTGKGPLENLADHLSDPVNNN 148
>gi|242045514|ref|XP_002460628.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
gi|241924005|gb|EER97149.1| hypothetical protein SORBIDRAFT_02g032090 [Sorghum bicolor]
Length = 160
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 87
MLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 1 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQ 59
Query: 88 IVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
+VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 60 VVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 119
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 120 FGFFVQAIVTGKGPLENLADHLADPVNNN 148
>gi|224034127|gb|ACN36139.1| unknown [Zea mays]
Length = 191
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 100/149 (67%), Gaps = 6/149 (4%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 87
MLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 1 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 59
Query: 88 IVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
+VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 60 VVLMGAIEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSM 119
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 120 FGFFVQAIVTGKGPLENLADHLADPVNNN 148
>gi|156890566|gb|ABU96693.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 267
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 102/161 (63%), Gaps = 6/161 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 95 RALEVIHGRWAMLGALGCITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 154
Query: 78 INLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVK 133
+ AV+ +++L+G E YRI G+ + L+PGG FDPLGLA DP FA LKVK
Sbjct: 155 AQSILAVLGFQVILMGLVEGYRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVK 214
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
EIKNGRLAMF+M FF+QA VTG+G +ENL H+ +P ANN
Sbjct: 215 EIKNGRLAMFSMFRFFVQAIVTGKGSLENLLDHIDNPVANN 255
>gi|302789319|ref|XP_002976428.1| light-harvesting complex [Selaginella moellendorffii]
gi|300156058|gb|EFJ22688.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 105/174 (60%), Gaps = 18/174 (10%)
Query: 22 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP---- 77
+E++HARWAML A G +IPE KF E+VW++ G L+G+TL+Y G IP
Sbjct: 147 FEILHARWAMLAALGVVIPEVLEKFFGVNFAESVWWRVGYAKLEGDTLDYLG--IPGLHI 204
Query: 78 ---INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDPD 125
++ I + +L+ G EY R LE D +PGG FDPLGL+KDP
Sbjct: 205 VGAQGIIVIAICQFLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLGLSKDPA 264
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
F LKVKEIKNGRLAM A LGF++QA VT +GP+ENL HL DP NN +T I
Sbjct: 265 TFEELKVKEIKNGRLAMVAWLGFYVQALVTKKGPLENLLDHLQDPLHNNAVTSI 318
>gi|145079288|tpg|DAA05908.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm10 [Acetabularia acetabulum]
Length = 224
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 95/143 (66%), Gaps = 5/143 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PE K+G E+VWFK G+ + L+Y G + +
Sbjct: 82 YREQELIHARWAMLGALGCVTPEILAKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSSLV 141
Query: 77 PINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ +++L+G E YR+ G E D L+PGG FDPLGLA DPD FA LKVK
Sbjct: 142 HAQYILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGGQFDPLGLADDPDTFAELKVK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTG 156
EIKNGRLAMF+M GF++QA VTG
Sbjct: 202 EIKNGRLAMFSMFGFYVQALVTG 224
>gi|148908677|gb|ABR17446.1| unknown [Picea sitchensis]
Length = 160
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/149 (55%), Positives = 99/149 (66%), Gaps = 6/149 (4%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 87
MLGA G + PE K G G EAVWFK GA + L+Y G I + A+ A +
Sbjct: 1 MLGALGCVFPELLAKTGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQ 59
Query: 88 IVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
+VL+G E YR+ G E D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M
Sbjct: 60 VVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSM 119
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 120 FGFFVQAIVTGKGPIENLFDHLADPTANN 148
>gi|302808391|ref|XP_002985890.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146397|gb|EFJ13067.1| light-harvesting complex [Selaginella moellendorffii]
Length = 320
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 108/174 (62%), Gaps = 18/174 (10%)
Query: 22 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP-INL 80
+E++HARWAML A G +IPE KF E+VW++ G L+G+TL+Y G IP +++
Sbjct: 147 FEILHARWAMLAALGVVIPEVLEKFFGVKFAESVWWRVGYAKLEGDTLDYLG--IPGLHI 204
Query: 81 VFA------VIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDPD 125
V A I + +L+ G EY R LE D +PGG FDPLGL+KDP
Sbjct: 205 VGAQGILVIAICQFLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLGLSKDPA 264
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
F LKVKEIKNGRLAM A LGF++QA VT +GP+ENL HL DP NN +T I
Sbjct: 265 TFEELKVKEIKNGRLAMVAWLGFYVQALVTKKGPLENLLDHLQDPLHNNAVTSI 318
>gi|543938|sp|Q00827.1|CB48_MAIZE RecName: Full=Chlorophyll a-b binding protein 48, chloroplastic;
AltName: Full=LHCII type I CAB-48; Short=LHCP; Flags:
Precursor
gi|22228|emb|CAA44888.1| chlorophyll a/b binding protein precursor [Zea mays]
Length = 264
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 6/157 (3%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWA+ G + PE + G G E VWFK G+ + L++ G +
Sbjct: 97 EVIHCRWAIAVGLGCVFPELLARNGVKFG-EGVWFKAGSQIFSEGGLSHPGNPSLVHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E Y + G ++ D L+ GG FDPLGL DP++FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKN 215
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 216 GRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNN 252
>gi|125563122|gb|EAZ08502.1| hypothetical protein OsI_30775 [Oryza sativa Indica Group]
Length = 321
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 106/175 (60%), Gaps = 18/175 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++H RWAML A G ++PE + F E VW+K G L G+TL+Y G IP
Sbjct: 146 YFNFEILHCRWAMLAALGVVVPELLDLFEVVHFVEPVWWKVGYAKLQGDTLDYLG--IPG 203
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I + +L+ G EY R LE D +PGG FDPLGL+K
Sbjct: 204 FRIAGGQGVIVIAICQALLMVGPEYARYCGIEALEPLGLYLPGDINYPGGALFDPLGLSK 263
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
DP F LKVKEIKNGRLAM A LGF++QA VTG+GP++NL +HLSDP NN+L+
Sbjct: 264 DPVAFEDLKVKEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNNILS 318
>gi|222618804|gb|EEE54936.1| hypothetical protein OsJ_02493 [Oryza sativa Japonica Group]
Length = 207
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 29 WAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA 86
WAMLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A
Sbjct: 46 WAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA 104
Query: 87 -EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF
Sbjct: 105 VQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 164
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP + L+DP NN
Sbjct: 165 SMFGFFVQAIVTGKGPPREPRRPLADPVNNN 195
>gi|359754897|gb|AEV59638.1| chloroplast photosystem II light harvesting complex protein type I,
partial [Oxytropis arctobia]
Length = 212
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 96/142 (67%), Gaps = 6/142 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 72 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 130
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KN
Sbjct: 131 ILAIWAVQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKN 190
Query: 138 GRLAMFAMLGFFLQAYVTGEGP 159
GRLAMF+M GFF+QA VTG+GP
Sbjct: 191 GRLAMFSMFGFFVQAIVTGKGP 212
>gi|449525738|ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 110/180 (61%), Gaps = 18/180 (10%)
Query: 22 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP---- 77
+E++HARWAML + G ++PE + FGA E +W++ G L G+TL+Y G IP
Sbjct: 161 FEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG--IPGLHL 218
Query: 78 ---INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDPD 125
++ I + +L+ G EY R LE D +PGG FDPL L+KD +
Sbjct: 219 AGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAE 278
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAER 185
F LKVKEIKNGRLAM A LGF+ QA +TG+GPV+NL H++DPF NN L++++ + R
Sbjct: 279 AFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLNHIADPFHNNFLSLLNSSFSR 338
>gi|358248178|ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
gi|255636882|gb|ACU18774.1| unknown [Glycine max]
Length = 331
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 14/172 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI-- 76
Y +E++HARWAML + G +IPE + GA E VW++ G L G+TL+Y G
Sbjct: 150 YFNFEILHARWAMLASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLH 209
Query: 77 ---PINLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDP 124
+V I + +L+ G EY R LE D +PGG FDPL L+ DP
Sbjct: 210 FAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSNDP 269
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
+ F LKVKEIKNGRLAM A LGF++QA +TG+GPV+NL H+SDPF NNLL
Sbjct: 270 EAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNLL 321
>gi|145079190|tpg|DAA05903.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm11 [Acetabularia acetabulum]
Length = 224
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 5/143 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PE +K+G E+VWFK G+ + L+Y G + +
Sbjct: 82 YREQELIHARWAMLGALGCVTPEILSKYGGVSFGESVWFKAGSQIFQEGGLDYLGNSNLV 141
Query: 77 PINLVFAVI-AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++ +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LK+K
Sbjct: 142 HAQSILAILGCQVLLMGAIEAYRVNGGPLGEGLDPLYPGDKFDPLGLADDPDTFAELKIK 201
Query: 134 EIKNGRLAMFAMLGFFLQAYVTG 156
EIKNGRLAMF+M GF++QA VTG
Sbjct: 202 EIKNGRLAMFSMFGFYVQAVVTG 224
>gi|224083380|ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
Length = 338
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 110/179 (61%), Gaps = 20/179 (11%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y +E++HARWAML A G +IPE + GA E VW++ G L G+TL+Y G IP
Sbjct: 161 YFNFEILHARWAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLG--IP- 217
Query: 79 NLVFA------VIA--EIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLA 121
L FA VIA + +L+ G EY R LE D +PGG FDPL L+
Sbjct: 218 GLHFAGGQGVLVIAFCQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLS 277
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
KDP F LKVKEIKNGRLAM A LGF++QA +TG+GPVENL +H+SDP NNL + +
Sbjct: 278 KDPVSFEELKVKEIKNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNLFSTLK 336
>gi|308811240|ref|XP_003082928.1| unnamed protein product [Ostreococcus tauri]
gi|63029301|gb|AAY27549.1| chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5
[Ostreococcus tauri]
gi|116054806|emb|CAL56883.1| unnamed protein product [Ostreococcus tauri]
Length = 316
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 110/192 (57%), Gaps = 36/192 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E++HARWAML G +IPEA N P VW +TG + LDG T G++ +
Sbjct: 140 YRVAEILHARWAMLAVPGVVIPEALNI------PGGVWTETGKVFLDGET----GRDSIL 189
Query: 79 NL--VFAVIAEIVLVGGAEYYRIT-------------------NGLDLEDKLHPGGPFDP 117
++A I ++VL+GGAE +R NGLD ++PGGP D
Sbjct: 190 EFWPIYAAI-QVVLMGGAEKFRQDGVGPAGFVPFKGKFEESAFNGLD---PVNPGGPLDF 245
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
+AK+P +LKVKEIKNGRLAM AMLG F+Q VTGEGP N KH+++PF N +T
Sbjct: 246 FDVAKNPQDLQILKVKEIKNGRLAMIAMLGVFVQGAVTGEGPAANWGKHVANPFGYNFVT 305
Query: 178 VISGNAERAPTL 189
+ SG +R P L
Sbjct: 306 ITSG-IDRTPVL 316
>gi|449455655|ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 109/180 (60%), Gaps = 18/180 (10%)
Query: 22 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP---- 77
+E++HARWAML + G ++PE + FGA E +W++ G L G+TL+Y G IP
Sbjct: 161 FEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLG--IPGLHL 218
Query: 78 ---INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDPD 125
++ I + +L+ G EY R LE D +PGG FDPL L+KD
Sbjct: 219 AGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAA 278
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAER 185
F LKVKEIKNGRLAM A LGF+ QA +TG+GPV+NL H++DPF NN L++++ + R
Sbjct: 279 AFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFLSLLNSSFSR 338
>gi|32307466|gb|AAP79138.1| chlorophyll a/b-binding protein II 2 [Bigelowiella natans]
Length = 346
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 107/171 (62%), Gaps = 13/171 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPE--AFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
Y+ EL+HARWAMLGA G I PE A N +G E VWFK GAL+L+ +++Y G
Sbjct: 171 YREAELLHARWAMLGALGCIFPEILAMN-YGVGL-EEPVWFKAGALVLNDKSIDYLGSPQ 228
Query: 77 PINLVFAVIA---EIVLVGGAEYYRIT----NGLDLEDKLHPGGP-FDPLGLAKDPDQFA 128
++ + +++L+GGAE YR + NG + DK+HPGG F+PL KD A
Sbjct: 229 LVHASSIIAIAAAQVLLMGGAEAYRASGVAPNGEEF-DKMHPGGYYFNPLKFGKDEADLA 287
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
LKVKEIKNGRLAMF+MLGF++QA TG GP++NL H +D N+ +
Sbjct: 288 ELKVKEIKNGRLAMFSMLGFYIQAATTGNGPLQNLVDHRADAANENIFKYV 338
>gi|326511319|dbj|BAJ87673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 266
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 93/144 (64%), Gaps = 6/144 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 99 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLVHAQS 157
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 158 ILAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 217
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVE 161
GRLAMF+M GFF+QA VTG P
Sbjct: 218 GRLAMFSMFGFFVQAIVTGGEPCR 241
>gi|297839529|ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333487|gb|EFH63905.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 105/178 (58%), Gaps = 18/178 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++HARWAML A G +IPE + GA E VW++ G L G TL+Y G IP
Sbjct: 154 YFNFEILHARWAMLAALGALIPEVLDLTGAFHFAEPVWWRVGYSKLQGETLDYLG--IPG 211
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I +++L+ G EY R LE D +PGG FDPL L++
Sbjct: 212 LHVAGSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSE 271
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
DP F LKVKEIKNGRLAM A LGF+ QA TG+GPV+NL H+SDP NNLL ++
Sbjct: 272 DPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLLAMLQ 329
>gi|15223108|ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12323973|gb|AAG51944.1|AC015450_5 putative chlorophyll A-B binding protein; 65434-67056 [Arabidopsis
thaliana]
gi|332197739|gb|AEE35860.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 327
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 104/178 (58%), Gaps = 18/178 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++HARWAML A G +IPE F+ G E VW++ G L G TL Y G IP
Sbjct: 151 YFNFEILHARWAMLAALGALIPEVFDLTGTFHFAEPVWWRVGYSKLQGETLEYLG--IPG 208
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I +++L+ G EY R LE D +PGG FDPL L++
Sbjct: 209 LHVAGSQGVIVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSE 268
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
DP F LKVKEIKNGRLAM A LGF+ QA TG+GPV+NL H+SDP NNL+ ++
Sbjct: 269 DPVAFEDLKVKEIKNGRLAMVAWLGFYAQAAFTGKGPVQNLVDHVSDPLHNNLIAMLQ 326
>gi|227206230|dbj|BAH57170.1| AT3G27690 [Arabidopsis thaliana]
Length = 160
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 99/149 (66%), Gaps = 6/149 (4%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 87
MLGA G PE +K G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 1 MLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQ 59
Query: 88 IVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
+VL+G E YRI G E D L+PGG FDPL LA+DP+ F+ LKVKE+KNGRLAMF+M
Sbjct: 60 VVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSM 119
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 120 FGFFVQAIVTGKGPIENLFDHIADPVANN 148
>gi|108864185|gb|ABG22425.1| Chlorophyll A-B binding protein, expressed [Oryza sativa Japonica
Group]
Length = 186
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/71 (90%), Positives = 66/71 (92%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
S YQAYELIHARWAMLGAAGFIIPEA NKFGANCGPEAVWFKTGALLLDGNTLNYFG +I
Sbjct: 111 SKYQAYELIHARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSI 170
Query: 77 PINLVFAVIAE 87
PINL+ AV AE
Sbjct: 171 PINLIVAVAAE 181
>gi|87313233|gb|ABD37912.1| light-harvesting chlorophyll-a/b binding protein LhcbM5
[Chlamydomonas incerta]
Length = 232
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 93/143 (65%), Gaps = 7/143 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--I 76
Y+ ELIHARWAMLGA G + PE K G E VWFK GA + L+Y G I
Sbjct: 91 YRELELIHARWAMLGALGCVTPELLAKNGTPIA-EPVWFKAGAQIFQEGGLDYLGNAGLI 149
Query: 77 PINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPF-DPLGLAKDPDQFALLKV 132
+ A +A +++L+G E YR+ G E DKLHPGG F DPLGLA+DPD FA LKV
Sbjct: 150 HAQSILATLAVQVILMGAIEGYRVNGGPAGEGLDKLHPGGQFFDPLGLAEDPDAFAELKV 209
Query: 133 KEIKNGRLAMFAMLGFFLQAYVT 155
KEIKNGRLAMF+M GFF+QA VT
Sbjct: 210 KEIKNGRLAMFSMFGFFVQAIVT 232
>gi|553065|gb|AAA65447.1| chlorophyll a/b binding protein, partial [Euglena gracilis]
Length = 334
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 88/138 (63%), Gaps = 6/138 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LNY G I
Sbjct: 197 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 256
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLED---KLHPGGPFDPLGLAKDPDQFALLKV 132
++V ++ + ++G E YR G L D +L+PGGPFDPLGLA DPD FA LKV
Sbjct: 257 HAQSVVLTFLSTLAIMGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKV 316
Query: 133 KEIKNGRLAMFAMLGFFL 150
KE+KNGRLAM AMLGF++
Sbjct: 317 KEVKNGRLAMVAMLGFYV 334
>gi|47026929|gb|AAT08685.1| chloroplast chlorophyll a/b-binding protein [Hyacinthus orientalis]
Length = 156
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 95/144 (65%), Gaps = 6/144 (4%)
Query: 36 GFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVG 92
G + PE + G G EAVWFK GA + L+Y G + + A+ A +++L+G
Sbjct: 2 GCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVLLMG 60
Query: 93 GAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAM +M GFF+
Sbjct: 61 AVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMLSMFGFFV 120
Query: 151 QAYVTGEGPVENLAKHLSDPFANN 174
QA VTG+GP+ENLA HL+DP NN
Sbjct: 121 QAIVTGKGPLENLADHLADPVNNN 144
>gi|149392733|gb|ABR26169.1| chlorophyll a-b binding protein [Oryza sativa Indica Group]
Length = 144
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 92/135 (68%), Gaps = 10/135 (7%)
Query: 45 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 101
KFG EAVWFK G+ + L+Y G I + A+ A ++VL+G E YRI
Sbjct: 3 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAG 57
Query: 102 GL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 159
G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP
Sbjct: 58 GPLGEVVDPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 117
Query: 160 VENLAKHLSDPFANN 174
+ENLA HL+DP NN
Sbjct: 118 LENLADHLADPVNNN 132
>gi|375152106|gb|AFA36511.1| light harvesting chlorophyll a/b-binding protein Lhcb1, partial
[Lolium perenne]
Length = 155
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 95/144 (65%), Gaps = 6/144 (4%)
Query: 36 GFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVG 92
G PE + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G
Sbjct: 1 GASFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 59
Query: 93 GAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+
Sbjct: 60 AVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 119
Query: 151 QAYVTGEGPVENLAKHLSDPFANN 174
QA VTG+GP+ENLA HL+DP NN
Sbjct: 120 QAIVTGKGPLENLADHLADPVNNN 143
>gi|224034685|gb|ACN36418.1| unknown [Zea mays]
Length = 186
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/69 (89%), Positives = 65/69 (94%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAG +IPEA NKFGANCGPEAVWFKTGALLLDGNTL+YFG +IPI
Sbjct: 113 YQAYELIHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNSIPI 172
Query: 79 NLVFAVIAE 87
NLV AVIAE
Sbjct: 173 NLVVAVIAE 181
>gi|449479523|ref|XP_004155624.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 153
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 92/135 (68%), Gaps = 10/135 (7%)
Query: 45 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 101
KFG EAVWFK G+ + L+Y G + + A+ A ++VL+G E YRI
Sbjct: 12 KFG-----EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 66
Query: 102 GL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 159
G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP
Sbjct: 67 GPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 126
Query: 160 VENLAKHLSDPFANN 174
+ENLA HL+DP NN
Sbjct: 127 LENLADHLADPVNNN 141
>gi|163914163|dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 91/138 (65%), Gaps = 6/138 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 98 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQS 156
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 157 ILAIWASQVILMGAVEGYRIGGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 216
Query: 138 GRLAMFAMLGFFLQAYVT 155
GRLAMF+M GFF+QA VT
Sbjct: 217 GRLAMFSMFGFFVQAIVT 234
>gi|168049357|ref|XP_001777130.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671573|gb|EDQ58123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 102/180 (56%), Gaps = 18/180 (10%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 73
T+ Y +E++HARWAML A G +IPE ++FG E VW+K G L G+TL+Y G
Sbjct: 166 TAFERYFNFEILHARWAMLAALGVVIPELLDRFGGVQFSEPVWWKVGYAKLQGDTLDYLG 225
Query: 74 KNIP-------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDP 117
IP ++ +++L+ G EY R LE D +PGG FDP
Sbjct: 226 --IPGLHIAGAQGILVIAFCQVILMLGPEYARYCGIEALEPLGIFLPGDVNYPGGALFDP 283
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LGL KD F LKVKE+KNGRLAM A LGF++QA VT +GP++NL L DP NL
Sbjct: 284 LGLTKDAAAFEDLKVKEMKNGRLAMVAWLGFYVQALVTQKGPIDNLFDFLEDPLHQNLFA 343
>gi|145356594|ref|XP_001422513.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
gi|144582756|gb|ABP00830.1| putative CP26, photosystem II light harvesting complex
[Ostreococcus lucimarinus CCE9901]
Length = 324
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 102/187 (54%), Gaps = 27/187 (14%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAML G +IPEA P VW +TG + LDG T F PI
Sbjct: 149 YRVAEVIHARWAMLAIPGVVIPEALGL------PGGVWTETGKVFLDGETGRPFFLENPI 202
Query: 79 NLVFAVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGGPFDPLGLAK 122
VFA + ++ L+ G E +R + + D ++PGGP D +A
Sbjct: 203 --VFAAV-QVALMAGVEQFRSSGEGPAGFVPFKGKFDESAFKGLDPINPGGPLDFFNVAS 259
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+P ALLKVKEIKNGRLAM AMLG F+Q TGEGP N KH++DPF N +T+ +
Sbjct: 260 NPQDLALLKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYNFVTLQA-- 317
Query: 183 AERAPTL 189
+R P L
Sbjct: 318 VDRTPVL 324
>gi|195616522|gb|ACG30091.1| chlorophyll a-b binding protein 2 [Zea mays]
Length = 241
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 92/155 (59%), Gaps = 25/155 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGR 139
+ A+ A ++VL+G E YRI A DP+ FA LKVKEIKNGR
Sbjct: 156 ILAIWACQVVLMGAVEGYRI---------------------ADDPEAFAELKVKEIKNGR 194
Query: 140 LAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LAMF+M GFF+QA VTG+GPVENLA HL+DP NN
Sbjct: 195 LAMFSMFGFFVQAIVTGKGPVENLADHLADPVNNN 229
>gi|412985627|emb|CCO19073.1| unknown [Bathycoccus prasinos]
Length = 291
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 103/188 (54%), Gaps = 27/188 (14%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAML G +IPEA N G + W +TG + L+G+T FG +
Sbjct: 114 YRVAEVIHARWAMLAVPGIVIPEALNIAGGD------WRETGKVFLEGST-GRFGP-AEL 165
Query: 79 NLVFAVIAEIVLVGGAEYYRIT---------------NGLDLE--DKLHPGGPFDPLGLA 121
L AV IVL+GGAE +R G D D ++PGGP D +A
Sbjct: 166 WLGIAVAPLIVLMGGAEKFRSDPASAPSGFVPFKGSFTGKDFAKLDPINPGGPLDFYNVA 225
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
P +LKVKEIKNGRLAM AMLG F+Q TGEGP N KH++DPF N +T+ +
Sbjct: 226 ATPQDLEILKVKEIKNGRLAMIAMLGVFVQGATTGEGPAANWGKHVADPFGYNFVTLNA- 284
Query: 182 NAERAPTL 189
+R P L
Sbjct: 285 -VDRTPVL 291
>gi|159483767|ref|XP_001699932.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
gi|158281874|gb|EDP07628.1| chlorophyll a-b binding protein [Chlamydomonas reinhardtii]
Length = 399
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 104/182 (57%), Gaps = 20/182 (10%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN-TL 69
+ S + YQ EL+HARWAMLG G ++PE G + G E VW+K GA L+ + TL
Sbjct: 212 KEQASFAKYQEAELLHARWAMLGVVGCLVPELLALRGVDLG-EPVWWKVGASKLNSDLTL 270
Query: 70 NYFG-------KNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGG- 113
N+ G I L+ A A VL+GG EY R LE D+ +PGG
Sbjct: 271 NWGGIEGFRIAGKQGIGLIAACQA--VLMGGPEYARYVGIRSLEPVGVFLPGDQNYPGGG 328
Query: 114 PFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
PFDPL A D D F VKE+KNGRLAM AMLGFF+QA VT GPV+N+ ++DP N
Sbjct: 329 PFDPLNYAADADGFVEQAVKEVKNGRLAMLAMLGFFVQAAVTRVGPVQNVLDFVADPAHN 388
Query: 174 NL 175
N+
Sbjct: 389 NI 390
>gi|302849997|ref|XP_002956527.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
gi|300258225|gb|EFJ42464.1| hypothetical protein VOLCADRAFT_107271 [Volvox carteri f.
nagariensis]
Length = 238
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 91/139 (65%), Gaps = 8/139 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G + P+ +K G EA+WFK GA + L+Y G N+ +
Sbjct: 83 YRELELIHARWAMLGALGCVTPKLLSKNGVQF-SEALWFKAGAQIFQEGGLDYLG-NLSL 140
Query: 79 ----NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKV 132
N+V + +++L+G E YR+ G E D L+PG FDPLGLA DPD FA LKV
Sbjct: 141 VHAQNIVATLACQVILMGLVEGYRVNGGPAGEGLDPLYPGKSFDPLGLADDPDTFAELKV 200
Query: 133 KEIKNGRLAMFAMLGFFLQ 151
KEIKNGRLAMF+M GFF+Q
Sbjct: 201 KEIKNGRLAMFSMFGFFVQ 219
>gi|310696692|gb|ADP06401.1| putative chlorophyll A/B binding protein [Hevea brasiliensis]
Length = 175
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 42 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 100
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 101 ILAIWAVQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKN 160
Query: 138 GRLAMFAMLGFFLQA 152
GRLAMF+M GFF+QA
Sbjct: 161 GRLAMFSMFGFFVQA 175
>gi|357497757|ref|XP_003619167.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
gi|355494182|gb|AES75385.1| Chlorophyll a-b binding protein 3C-like protein [Medicago
truncatula]
Length = 229
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 96/157 (61%), Gaps = 26/157 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAM F++ WFK + + L+Y G +
Sbjct: 82 EVIHSRWAM-----------FDR----------WFKARSQIFSEGGLDYLGNPSLVHAQS 120
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DP+ F LKVKEIKN
Sbjct: 121 ILAIWACQVILMGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFVELKVKEIKN 180
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 181 GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 217
>gi|55668304|gb|AAV54188.1| chloroplast major light-harvesting complex II protein m9
[Haematococcus pluvialis]
Length = 152
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 90/142 (63%), Gaps = 6/142 (4%)
Query: 38 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGA 94
+ PE G + G E VWFK GA + LNY G I N+V + +++L+G
Sbjct: 1 VTPELLAANGVSFG-EPVWFKAGAQIFQDGGLNYLGNPSLIHAQNIVATLAVQVILMGLV 59
Query: 95 EYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQA 152
E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRLAMF+ GFF+QA
Sbjct: 60 EGYRMNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQA 119
Query: 153 YVTGEGPVENLAKHLSDPFANN 174
VTG+GP++NL HL++P NN
Sbjct: 120 IVTGKGPIQNLTDHLANPAENN 141
>gi|87313203|gb|ABD37898.1| light-harvesting chlorophyll-a/b binding protein LhcbM1
[Acutodesmus obliquus]
Length = 223
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHARWAMLGA G I PE G E VWFK GA + LNY G +
Sbjct: 87 YRELELIHARWAMLGALGCITPELLANNGTPIA-EPVWFKAGAQIFQDGGLNYLGNENLV 145
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPF-DPLGLAKDPDQFALLKV 132
+ ++ ++ +++L+G E YR+ G E DKL+PGG F DPLGLA DPD FA LKV
Sbjct: 146 HAQSIIVTLLVQVILMGTVEGYRVNGGPAGEGLDKLYPGGDFFDPLGLADDPDTFAELKV 205
Query: 133 KEIKNGRLAMFAMLGFFL 150
KEIKNGRLAMF+M GFF+
Sbjct: 206 KEIKNGRLAMFSMFGFFV 223
>gi|227202590|dbj|BAH56768.1| AT5G54270 [Arabidopsis thaliana]
Length = 162
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 97/151 (64%), Gaps = 8/151 (5%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 87
MLGA G I PE K+ E VWFK G+ + L+Y G + + AV+ +
Sbjct: 1 MLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQ 60
Query: 88 IVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKVKEIKNGRLAMF
Sbjct: 61 VILMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 119
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 120 SMFGFFVQAIVTGKGPLENLLDHLDNPVANN 150
>gi|157965841|gb|ABW06957.1| chloroplast light-harvesting complex II protein precursor [Euglena
gracilis]
Length = 562
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 104/181 (57%), Gaps = 18/181 (9%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ E+ H RWAMLG G ++PE F G P W+ A + + + L+Y G +
Sbjct: 189 FRDSEVFHGRWAMLGLVGCLVPEVFGNLGIAQLP--AWYDA-ATVANTSNLDYLGNPNLV 245
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLEDK-----LHPGGPFDPLGLAKDPDQFALL 130
N+ F ++ ++L+G E +R L E K +PGGPFDPL L P+ L
Sbjct: 246 HASNVSFIALSTLLLMGPVEAWRWNGALASEAKSAERTTYPGGPFDPLKLGASPE----L 301
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI---SGNAERAP 187
K+KEIKNGRLAM M GF+ Q+YVTGEGP+ NLA HL+DP NNLL + + + E+ P
Sbjct: 302 KLKEIKNGRLAMVGMFGFWAQSYVTGEGPLANLAAHLADPAHNNLLNTVAMFAASGEKRP 361
Query: 188 T 188
T
Sbjct: 362 T 362
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 97/170 (57%), Gaps = 23/170 (13%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG-------KN 75
E+ H RWAMLG G ++PE F G P W++ GA+ G +L+Y G N
Sbjct: 402 EVYHGRWAMLGLVGCLVPEVFGNLGIAQLP--AWYEAGAVANTG-SLDYLGNPNLVHASN 458
Query: 76 IPINLVFAVIAEIVLVGGAEYYRITNGLDLEDK-----LHPGGPFDPLGLAKDPDQFALL 130
+P L+F ++L E +R + E K +PGGPFDPL L P+ L
Sbjct: 459 VP--LIF--FTTLLLFLPIEAWRWNGQIAPEAKSAERTTYPGGPFDPLKLGASPE----L 510
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K+KEIKNGRLAM M GF+ Q+YVTGEGP+ NLA HL+DP NNLL ++
Sbjct: 511 KLKEIKNGRLAMVGMFGFWAQSYVTGEGPLANLAAHLADPAHNNLLNTVA 560
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 26/164 (15%)
Query: 40 PEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG-------KNIPINLVFAVIAEIVLVG 92
PE F G P W++ GA+ G +L+Y G N+P L+F ++L
Sbjct: 1 PEVFGNLGIAQLP--AWYEAGAVANTG-SLDYLGNPNLVHASNVP--LIF--FTTLLLFL 53
Query: 93 GAEYYRITNGLDLEDK-----LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 147
E +R + + K +PGGPFDPL L P+ LK+KEIKNGRLAM M G
Sbjct: 54 PIEAWRWNGQIAPDAKSKEWTTYPGGPFDPLKLGASPE----LKLKEIKNGRLAMVGMFG 109
Query: 148 FFLQAYVTGEGPVENLAKHLSDPFANNLLTVI---SGNAERAPT 188
F+ Q+YVTGEGP+ NLA HL+DP NNLL + + + E+ PT
Sbjct: 110 FWAQSYVTGEGPLANLAAHLADPAHNNLLNTVAMFAASGEKRPT 153
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 147
FDPLGLAKDP+ FA + E+ +GR AM ++G
Sbjct: 383 FDPLGLAKDPEDFAKNRDSEVYHGRWAMLGLVG 415
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLG 147
FDP GLAKDP FA + E+ +GR AM ++G
Sbjct: 174 FDPFGLAKDPADFAKFRDSEVFHGRWAMLGLVG 206
>gi|13265505|gb|AAG40044.2|AF324693_1 At2g34430 [Arabidopsis thaliana]
Length = 268
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 96/163 (58%), Gaps = 15/163 (9%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH+RWAMLGA G + PE + G G EAVW + L + G +
Sbjct: 98 EVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWVQGWFTDLQRRRI---GPTWATPSLV 153
Query: 83 AVIAEIVLVGGAEY-----YRIT----NGL--DLEDKLHPGGPFDPLGLAKDPDQFALLK 131
+G + Y R T NG + ED L+PGG FDPLGLA DP+ FA LK
Sbjct: 154 HAQEHFSHLGYSSYPHGSLLRATRVPGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELK 213
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
VKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 214 VKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 256
>gi|303288722|ref|XP_003063649.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
gi|226454717|gb|EEH52022.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas pusilla CCMP1545]
Length = 306
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 100/188 (53%), Gaps = 28/188 (14%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+A E+IHARWAML G +IPEA P VW +TG + LDG PI
Sbjct: 130 YRAAEVIHARWAMLAIPGIVIPEALGI------PGGVWTETGKVFLDGEAGRPEILQNPI 183
Query: 79 NLVFAVIAEIVLVGGAEYYRIT---------------NGLDLE--DKLHPGGPFDPLGLA 121
+FA I +I L E YR +G D D ++PGGP D +A
Sbjct: 184 --IFAGI-QIALFAAVEGYRSGKVAPPEGFVPGKGKFSGSDFAGLDPINPGGPLDFFNVA 240
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
P+ A+LKVKEIKNGRLAM AMLG F+Q TGEGP N KH++DPF N +T+ +
Sbjct: 241 STPEDLAILKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYNFVTISA- 299
Query: 182 NAERAPTL 189
ER P L
Sbjct: 300 -IERTPVL 306
>gi|13676402|dbj|BAB41190.1| type I chlorophyll a/b-binding protein a [Amaranthus tricolor]
Length = 154
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 88/133 (66%), Gaps = 6/133 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL-- 80
E+IH RWAMLGA G I PE + G G EAVWFK G+ + L+Y G I+
Sbjct: 23 EVIHCRWAMLGALGCIFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPTLIHAQS 81
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 82 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPDAFAELKVKEIKN 141
Query: 138 GRLAMFAMLGFFL 150
GRLAMF+M GFF+
Sbjct: 142 GRLAMFSMFGFFV 154
>gi|384251912|gb|EIE25389.1| putative chlorophyll a/b-binding protein [Coccomyxa subellipsoidea
C-169]
Length = 287
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 98/174 (56%), Gaps = 13/174 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG-KNIP 77
Y +EL+HARWAMLGA G IPE G + EA W+ G L G LNY G +
Sbjct: 113 YFEFELLHARWAMLGALGAGIPEILQYSGVSDFLEARWWAVGGAKLQGEDLNYLGVSGLR 172
Query: 78 I----NLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGPFDPLGLAKDPD 125
I + I +++L+ G EY R LE DK +PGG FDPLGL+KDP
Sbjct: 173 IAGGQGIAIIAICQVLLMFGPEYARACGIEALEPLGLYLPGDKNYPGGLFDPLGLSKDPA 232
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
FA L+VKEIKNGRLA+ A +GF QA VT +GP+ +L +DP NN+ +
Sbjct: 233 SFADLQVKEIKNGRLALVAWVGFAAQAAVTRKGPIADLLDFAADPVHNNIFAYL 286
>gi|13676406|dbj|BAB41192.1| type I chlorophyll a/b-binding protein b [Amaranthus tricolor]
Length = 154
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 87/133 (65%), Gaps = 6/133 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I
Sbjct: 23 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQS 81
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA DPD FA LKVKEIKN
Sbjct: 82 ILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPDAFAELKVKEIKN 141
Query: 138 GRLAMFAMLGFFL 150
GRLAMF+M GFF+
Sbjct: 142 GRLAMFSMFGFFV 154
>gi|15637137|gb|AAL04435.1| chlorophyll a/b binding protein [Beta vulgaris]
Length = 168
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 89/137 (64%), Gaps = 6/137 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 23 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 81
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A +++L+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKN
Sbjct: 82 ILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKN 141
Query: 138 GRLAMFAMLGFFLQAYV 154
GRLAM +M GFF+QA V
Sbjct: 142 GRLAMSSMFGFFVQAIV 158
>gi|226500382|ref|NP_001141936.1| uncharacterized protein LOC100274085 [Zea mays]
gi|194706506|gb|ACF87337.1| unknown [Zea mays]
gi|414884911|tpg|DAA60925.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
gi|414884912|tpg|DAA60926.1| TPA: hypothetical protein ZEAMMB73_235289 [Zea mays]
Length = 164
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 97/163 (59%), Gaps = 18/163 (11%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP-------INLVFA 83
ML A G ++PE + FG E VW+K G L G+ L+Y G IP +V
Sbjct: 1 MLAALGVVVPELLDLFGLVHFVEPVWWKVGYAKLQGDNLDYLG--IPGFRIAGGQGVVVI 58
Query: 84 VIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKDPDQFALLKVKE 134
I + +L+ G EY R LE D +PGGP FDPLGL+KDP F LKVKE
Sbjct: 59 AICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLGLSKDPVAFEDLKVKE 118
Query: 135 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
IKNGRLAM A GF++QA VTG+GPV+NL +HLSDP NN+L+
Sbjct: 119 IKNGRLAMVAWFGFYIQAAVTGKGPVQNLVEHLSDPLNNNILS 161
>gi|238858956|dbj|BAH70299.1| chlorophyll a/b binding protein [Vicia cinerea]
Length = 266
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 7/124 (5%)
Query: 57 FKTGALLLDGNTLNYFGKNIPINLVFAVIA----EIVLVGGAEYYRITNGL--DLEDKLH 110
FK G+ + L+Y G N + +++A +++L+G E YRI G ++ D L+
Sbjct: 132 FKAGSQIFSEGGLDYLG-NPSLGSRQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLY 190
Query: 111 PGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
PGG FDPLGLA+DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HLSDP
Sbjct: 191 PGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDP 250
Query: 171 FANN 174
NN
Sbjct: 251 VNNN 254
>gi|255087238|ref|XP_002505542.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
gi|226520812|gb|ACO66800.1| chlorophyll a/b-binding protein CP26, chloroplast precursor
[Micromonas sp. RCC299]
Length = 308
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 99/188 (52%), Gaps = 28/188 (14%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+A E+IHARWAML G +IPEA P VW +TG + LDG P
Sbjct: 132 YRAAEVIHARWAMLAIPGIVIPEALGI------PGGVWTETGKVFLDGEAGRPEILQNP- 184
Query: 79 NLVFAVIAEIVLVGGAEYYRIT---------------NGLDLE--DKLHPGGPFDPLGLA 121
+FA I +I L E YR +G D D ++PGGP D +A
Sbjct: 185 -YLFAAI-QIGLFAAVEGYRAGKAPAPDGFVPFKGKFSGSDFSGLDPINPGGPLDFFNVA 242
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
PD A+LKVKEIKNGRLAM AMLG F+Q TGEGP N KH++DPF N +T+ +
Sbjct: 243 ATPDDLAVLKVKEIKNGRLAMIAMLGVFVQGLTTGEGPAANWGKHVADPFGYNFVTISA- 301
Query: 182 NAERAPTL 189
ER P L
Sbjct: 302 -IERTPVL 308
>gi|115790|sp|P15192.1|CB22_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 2;
AltName: Full=Chlorophyll a-b binding protein type II 2;
Short=CAB; AltName: Full=LHCP
gi|169376|gb|AAA33776.1| chlorophyll a/b-binding protein [Pinus sylvestris]
Length = 150
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 89/135 (65%), Gaps = 10/135 (7%)
Query: 45 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN 101
KFG EAVWFK GA + L+Y G I + A+ A ++VL+G E YR+
Sbjct: 9 KFG-----EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGG 63
Query: 102 GLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGP 159
G E D L+PG FDPLGLA DP+ A LKVKEIKNGRLAMF+M GFF+QA VTG+GP
Sbjct: 64 GPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 123
Query: 160 VENLAKHLSDPFANN 174
+ENL HL+DP ANN
Sbjct: 124 IENLYDHLADPVANN 138
>gi|255539358|ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223551445|gb|EEF52931.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 329
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 106/178 (59%), Gaps = 20/178 (11%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y +E++HARWAML A G + PE + GA E VW++ G L G+TL+Y G IP
Sbjct: 152 YFNFEILHARWAMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLG--IP- 208
Query: 79 NLVFA--------VIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLA 121
L FA I + +L+ G EY R LE D +PGGP FDPL L+
Sbjct: 209 GLHFAGSQGVLVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLNLS 268
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LKVKEIKNGRLAM A LGF+ QA +TG+GPV+NL +H+SDPF NNLL V+
Sbjct: 269 SDAVALEELKVKEIKNGRLAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNNLLCVL 326
>gi|168053458|ref|XP_001779153.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669412|gb|EDQ55999.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 79
++ EL++ RWAMLG G ++PE N G E VWFKTGA + ++Y G IN
Sbjct: 61 RSQELMNGRWAMLGITGCLVPELINS-NPTPGFEPVWFKTGAQIFSEAGIDYLGVPGFIN 119
Query: 80 ---LVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEI 135
LV ++ + +L+G AEY RI + D +PGG FDPLG + DP+ FA LKVKEI
Sbjct: 120 AHSLVAVIVVQALLMGVAEYARIKLSPEGNDAFYPGGKAFDPLGFSSDPESFAELKVKEI 179
Query: 136 KNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
KNGRLAM AM G F Q VTG P++NL L
Sbjct: 180 KNGRLAMMAMAGLFAQGAVTGVSPLQNLHDFLK 212
>gi|115831|sp|P15773.1|CB2_MALDO RecName: Full=Chlorophyll a-b binding protein AB10, chloroplastic;
AltName: Full=LHCII type I CAB-AB10; Short=LHCP; Flags:
Precursor
gi|19541|emb|CAA35690.1| unnamed protein product [Malus x domestica]
Length = 268
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 100/163 (61%), Gaps = 7/163 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+R AM A G I PE + G G EAVWFK GA + L+Y G +
Sbjct: 102 EVIHSRCAMSAALGCIFPELLSVMGQGFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQS 160
Query: 81 VFAV-IAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ +++L+G E YRI G ++ D L+PG FD LGLA+D + FA LKVKE+KN
Sbjct: 161 ILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPGS-FDSLGLAEDTEAFAELKVKELKN 219
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
GRLAMF+M GFF+QA V+ + +ENLA HL NN L+ ++
Sbjct: 220 GRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVT 262
>gi|145079801|tpg|DAA05936.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Micromonas sp. CCMP490]
Length = 333
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 99/189 (52%), Gaps = 29/189 (15%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+ HARWAML G +IPEA G N W +TG + LDG I
Sbjct: 156 YRIAEVQHARWAMLAVPGVVIPEALGVPGGN------WTETGKVFLDGEAGR---PEILG 206
Query: 79 NLVFAVIAEIVLVGGAEYYRITN---------------GLDLE--DKLHPGGPFDPLGLA 121
N E+ L+ G E YR G D + D ++PGGP D L +A
Sbjct: 207 NPYLFTAIEVALLAGVEGYRSGKLEAPAGFAPIYGKFEGKDFKGLDPINPGGPLDFLNVA 266
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVT-GEGPVENLAKHLSDPFANNLLTVIS 180
P+ A+LKVKEIKNGRLAM AMLG F+Q T GEGP N AKH++DPFA N +T+ +
Sbjct: 267 STPEDLAILKVKEIKNGRLAMIAMLGVFVQGATTGGEGPATNWAKHVADPFAYNFVTISA 326
Query: 181 GNAERAPTL 189
+R P L
Sbjct: 327 --IDRTPVL 333
>gi|302849410|ref|XP_002956235.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
gi|300258538|gb|EFJ42774.1| hypothetical protein VOLCADRAFT_66679 [Volvox carteri f.
nagariensis]
Length = 276
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 103/179 (57%), Gaps = 20/179 (11%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN-TLNYFG---- 73
++ EL+HARWAMLG G ++PE G G E VW+K GA L+ + TLN+ G
Sbjct: 98 FREVELLHARWAMLGFVGCMVPELLALRGVELG-EPVWWKVGASKLNSDLTLNWGGIEGF 156
Query: 74 ---KNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGG-PFDPLGLA 121
I L+ A A VL+GG EY R LE D+ +PGG PFDPL A
Sbjct: 157 RIAGKQGIGLIAACQA--VLMGGPEYARYVGIRSLEPVGVFLPGDQNYPGGGPFDPLNYA 214
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D D F V+EIKNGRLAM AMLG F+QA VT +GPV+N+ + +SDP N+ T ++
Sbjct: 215 ADADGFVDQAVREIKNGRLAMVAMLGLFVQAAVTKKGPVQNVMEFVSDPAGENIFTNVA 273
>gi|168812218|gb|ACA30285.1| putative chlorophyll A-B binding protein type I [Cupressus
sempervirens]
Length = 134
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 54 AVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DK 108
AVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G E D
Sbjct: 1 AVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDP 60
Query: 109 LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAM +M GFF+QA VTG+GP+ENL HL+
Sbjct: 61 LYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMSSMFGFFVQAIVTGKGPIENLYDHLA 120
Query: 169 DPFANN 174
DP NN
Sbjct: 121 DPSTNN 126
>gi|224928|prf||1204205C protein 1C,chlorophyll binding
Length = 165
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+
Sbjct: 64 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 123
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 124 MFGFFVQAIVTGKGPLENLADHLADPVNNN 153
>gi|302816085|ref|XP_002989722.1| light-harvesting complex [Selaginella moellendorffii]
gi|300142499|gb|EFJ09199.1| light-harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 98/174 (56%), Gaps = 25/174 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE F K G AV WFKTG G T NY+ P L
Sbjct: 106 EIINGRYAMLGAAGAIAPEIFGKIGIIPQQTAVVWFKTGVFPPAG-TYNYWAD--PYTLF 162
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPFDPLGLAKD 123
F E+ L+G AE+ R + L E D +PGG F+P G KD
Sbjct: 163 FL---EMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKYLGGSGDPAYPGGIFNPFGFGKD 219
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+KNGRLAM A+LG+F+QA TG GP +NL HL+DPFANN+LT
Sbjct: 220 EKSMRTLKIKEVKNGRLAMLAILGYFIQAPFTGVGPFQNLLDHLADPFANNILT 273
>gi|407971012|ref|NP_001234032.1| chlorophyll a-b binding protein 6A, chloroplastic [Solanum
lycopersicum]
gi|115764|sp|P12360.1|CB11_SOLLC RecName: Full=Chlorophyll a-b binding protein 6A, chloroplastic;
AltName: Full=LHCI type I CAB-6A; AltName:
Full=Light-harvesting complex I 26 kDa protein; Flags:
Precursor
gi|170494|gb|AAA34186.1| chlorophyll a/b binding protein precursor [Solanum lycopersicum]
Length = 246
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 96/165 (58%), Gaps = 14/165 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G I+PEA W K + G Y G+ +P
Sbjct: 84 YKESELIHCRWAMLAVPGIIVPEALGL--------GNWVKAQEWAAIPGGQATYLGQPVP 135
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP +F LKVKEIK
Sbjct: 136 WGTLPTILAIEFLAIAFVEHQRSMEK-DSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIK 194
Query: 137 NGRLAMFAMLGFFLQ--AYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A++GF +Q AY+ G GP+ENLA HL+DP+ NN+ VI
Sbjct: 195 NGRLALLAIVGFCVQQSAYL-GTGPLENLATHLADPWHNNIGDVI 238
>gi|115821|sp|P14275.1|CB2C_SOLLC RecName: Full=Chlorophyll a-b binding protein 1C, chloroplastic;
AltName: Full=LHCII type I CAB-1C; Short=LHCP; Flags:
Precursor
Length = 265
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+
Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 223
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 224 MFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|302824061|ref|XP_002993677.1| light harvesting complex [Selaginella moellendorffii]
gi|300138500|gb|EFJ05266.1| light harvesting complex [Selaginella moellendorffii]
Length = 281
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 98/174 (56%), Gaps = 25/174 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE F K G AV WFKTG G T NY+ P L
Sbjct: 106 EIINGRYAMLGAAGAIAPEIFGKIGIIPQETAVVWFKTGVFPPAG-TYNYWAD--PYTLF 162
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPFDPLGLAKD 123
F E+ L+G AE+ R + L E D +PGG F+P G KD
Sbjct: 163 FL---EMALMGFAEHRRAQDFYKPGSMGKQYFLGFEKYLGGSGDPAYPGGIFNPFGFGKD 219
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+KNGRLAM A+LG+F+QA TG GP +NL HL+DPFANN+LT
Sbjct: 220 EKSMRTLKIKEVKNGRLAMLAILGYFIQAPFTGVGPFQNLLDHLADPFANNILT 273
>gi|338746088|emb|CCC15093.1| putative chloroplast light-harvesting complex II protein precursor
[Lepidodinium chlorophorum]
Length = 215
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 88/142 (61%), Gaps = 5/142 (3%)
Query: 26 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFA 83
HARWAMLGA G ++PE + E VWFK GA + L+Y G + + A
Sbjct: 72 HARWAMLGALGSLLPELLATYAGTPLLEPVWFKAGAQIFSPGGLDYLGNPSLVHAQSILA 131
Query: 84 VIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRL 140
++ +++L+G +E YR+ G ++ D L+PG FDPLG ++DP+ L+ KEIKNGRL
Sbjct: 132 ILGFQVLLMGLSEGYRLAGGPLGEVGDALYPGASFDPLGFSEDPESLLELQTKEIKNGRL 191
Query: 141 AMFAMLGFFLQAYVTGEGPVEN 162
AM AMLG + QA VTG+GPV N
Sbjct: 192 AMLAMLGMYTQALVTGKGPVSN 213
>gi|82074|pir||A24039 chlorophyll a/b-binding protein 1A precursor - tomato (fragments)
gi|224926|prf||1204205A protein 1A,chlorophyll binding
Length = 165
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 63 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 122
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 123 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 153
>gi|170388|gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|225895|prf||1402358A photosystem I protein CAB
Length = 246
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G I+PEA W K + G Y G+ +P
Sbjct: 84 YKESELIHCRWAMLAVPGIIVPEALGL--------GNWVKAQEWAAIPGGQATYLGQPVP 135
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP +F LKVKEIK
Sbjct: 136 WGTLPTILAIEFLAIAFVEHQRSMEK-DSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIK 194
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ VI
Sbjct: 195 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVI 238
>gi|145351847|ref|XP_001420273.1| chlorophyll a/b binding, possibly photosystem II light harvesting
complex [Ostreococcus lucimarinus CCE9901]
gi|144580507|gb|ABO98566.1| chlorophyll a/b binding, possibly photosystem II light harvesting
complex [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 15/161 (9%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN-TLNYFGK---NIPI 78
EL+HARWAMLG G +PE ++G E VW+K GA ++ + +L+YFG +I
Sbjct: 204 ELLHARWAMLGIVGVAVPELLERYGVADLGEPVWWKVGAAKMNSDVSLDYFGLQGFHIAG 263
Query: 79 NLVFAVIA--EIVLVGGAEYYRITNGLDLE--------DKLHPGG-PFDPLGLAKDPDQF 127
A+IA ++VL+GG EY R LE DK +PGG PFDP ++ D D+F
Sbjct: 264 GSGIAIIAACQVVLMGGPEYARYVGIDSLEPVGVYLPGDKDYPGGAPFDPFKISDDADEF 323
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
KV EIK+GRLAM AMLG QA+VT GP+ENLA S
Sbjct: 324 EKQKVMEIKHGRLAMIAMLGVAAQAFVTRAGPIENLASVFS 364
>gi|167997433|ref|XP_001751423.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697404|gb|EDQ83740.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%), Gaps = 2/89 (2%)
Query: 88 IVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
+VL+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKEIKNGRLAMF+M
Sbjct: 144 VVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSM 203
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 204 FGFFVQAIVTGKGPLENLNDHLADPVANN 232
>gi|115824|sp|P14277.1|CB2F_SOLLC RecName: Full=Chlorophyll a-b binding protein 3B, chloroplastic;
AltName: Full=LHCII type I CAB-3B; Short=LHCP; Flags:
Precursor
Length = 267
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+
Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 225
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 226 MFGFFVQAIVTGKGPLENLADHIADPVNNN 255
>gi|82077|pir||F24039 chlorophyll a/b-binding protein 3B precursor - tomato (fragments)
gi|224931|prf||1204205F protein 3B,chlorophyll binding
Length = 167
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF+
Sbjct: 66 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFS 125
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 126 MFGFFVQAIVTGKGPLENLADHIADPVNNN 155
>gi|115823|sp|P14276.1|CB2E_SOLLC RecName: Full=Chlorophyll a-b binding protein 3A, chloroplastic;
AltName: Full=LHCII type I CAB-3A; Short=LHCP; Flags:
Precursor
Length = 267
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 165 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 224
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 225 SMFGFFVQAIVTGKGPLENLADHIADPVNNN 255
>gi|82076|pir||E24039 chlorophyll a/b-binding protein 3A precursor - tomato (fragments)
gi|224930|prf||1204205E protein 3A,chlorophyll binding
Length = 167
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 65 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 124
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 125 SMFGFFVQAIVTGKGPLENLADHIADPVNNN 155
>gi|357495587|ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519417|gb|AET01041.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 557
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 103/182 (56%), Gaps = 26/182 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 104 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYNYWADNYTL--- 159
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ +G AE+ R + L LE L +PGGP F+PLG K
Sbjct: 160 --FVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGK 217
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT + GN
Sbjct: 218 DEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSLKGN 277
Query: 183 AE 184
E
Sbjct: 278 KE 279
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 384 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYNYWADNYTL--- 439
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ +G AE+ R+ + L LE L +PGGP F+PLG K
Sbjct: 440 --FVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGK 497
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 498 DEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSL 554
>gi|115816|sp|P14274.1|CB2A_SOLLC RecName: Full=Chlorophyll a-b binding protein 1A, chloroplastic;
AltName: Full=LHCII type I CAB-1A; Short=LHCP; Flags:
Precursor
Length = 265
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 163 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 222
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 223 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
>gi|159138427|gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138431|gb|ABW89218.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138435|gb|ABW89220.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
+++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+
Sbjct: 15 QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 74
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA HL+DP ANN
Sbjct: 75 MFGFFVQAIVTGKGPLENLADHLADPVANN 104
>gi|159138421|gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138423|gb|ABW89214.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138425|gb|ABW89215.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138429|gb|ABW89217.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138433|gb|ABW89219.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138437|gb|ABW89221.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138439|gb|ABW89222.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138441|gb|ABW89223.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138443|gb|ABW89224.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138445|gb|ABW89225.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138447|gb|ABW89226.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138451|gb|ABW89228.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138453|gb|ABW89229.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138455|gb|ABW89230.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
gi|159138457|gb|ABW89231.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
+++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+
Sbjct: 15 QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFS 74
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA HL+DP ANN
Sbjct: 75 MFGFFVQAIVTGKGPLENLADHLADPVANN 104
>gi|303281804|ref|XP_003060194.1| chlorophyll a/b-binding protein [Micromonas pusilla CCMP1545]
gi|226458849|gb|EEH56146.1| chlorophyll a/b-binding protein [Micromonas pusilla CCMP1545]
Length = 391
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 92/158 (58%), Gaps = 18/158 (11%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGA----NCGPEAVWFKTGALLLDGNTLNYFGKN--- 75
EL+HARWAML G +PEA + GA E VW+K GA L+G +LNY G
Sbjct: 220 ELLHARWAMLAVVGVAVPEALSIAGALPEGAALAEPVWWKVGAAKLNGESLNYGGLGGFV 279
Query: 76 IPINLVFAVIA--EIVLVGGAEYYRITNGLDLE--------DKLHPGG-PFDPLGLAKDP 124
I AVIA + VL+GG EY R LE D +PGG PFDP GL+ D
Sbjct: 280 IAGKQGVAVIAACQAVLMGGPEYARYVGIRSLEPVGVYLPGDANYPGGAPFDPFGLSDDA 339
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 162
D+FA KV EI++GRLAM AMLG F QA VTGEGPV N
Sbjct: 340 DRFARQKVIEIEHGRLAMVAMLGCFAQAIVTGEGPVAN 377
>gi|493723|emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
[Nicotiana tabacum]
Length = 245
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA W K + G Y G+ +P
Sbjct: 84 YKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAIPGGQATYLGQPVP 135
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP +F LKVKEIK
Sbjct: 136 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIK 194
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ VI
Sbjct: 195 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVI 238
>gi|398313939|emb|CCI55396.1| PSI antenna protein Lhca1 [Marchantia polymorpha]
Length = 243
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 91/163 (55%), Gaps = 10/163 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G +IPEA N W T G Y G +P
Sbjct: 83 YKESELIHCRWAMLAVPGVLIPEALGL--GNWVSAQQWAAT-----PGGQATYLGNPVPW 135
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ ++A E + V E R D E + +PGGPFDPLG AKDP + K+KE+KN
Sbjct: 136 GTLPIILAIEFLAVAFVEAKRGEEP-DHEKRKYPGGPFDPLGFAKDPKKLEEYKLKELKN 194
Query: 138 GRLAMFAMLGFFLQAYV-TGEGPVENLAKHLSDPFANNLLTVI 179
GRLA+ A LGF +QA G GP+ENLA HLS+P+ANN+ +I
Sbjct: 195 GRLALLAFLGFSVQAIAYPGTGPLENLASHLSNPWANNIANII 237
>gi|145079310|tpg|DAA05909.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Acetabularia acetabulum]
Length = 208
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 85/132 (64%), Gaps = 5/132 (3%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIHAR+AMLGA G + PE K+G E+VWF+ GA + L+Y G I
Sbjct: 77 YRETELIHARFAMLGALGCVTPELLAKYGGVSFGESVWFRAGAQIFQEGGLDYLGSPALI 136
Query: 79 N---LVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ + VI+++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LK+K
Sbjct: 137 HAQSIGAIVISQVVLMGLVEGYRVNGGPAGEGLDSLYPGESFDPLGLADDPDTFAELKIK 196
Query: 134 EIKNGRLAMFAM 145
EIKNGRLAMF+M
Sbjct: 197 EIKNGRLAMFSM 208
>gi|115822|sp|P10707.1|CB2D_SOLLC RecName: Full=Chlorophyll a-b binding protein 1D; AltName:
Full=LHCII type I CAB-1D; Short=LHCP
gi|170428|gb|AAA34158.1| chlorophyll a/b-binding protein Cab-1D, partial [Solanum
lycopersicum]
gi|224929|prf||1204205D protein 1D,chlorophyll binding
Length = 116
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 14 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 73
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 74 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 104
>gi|159138449|gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
[Helianthus annuus]
Length = 116
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
+++L+G E YRI G ++ D L+PGG FDPLGLA DP FA LKVKEIKNGRLAMF+
Sbjct: 15 QVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPXAFAELKVKEIKNGRLAMFS 74
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA HL+DP ANN
Sbjct: 75 MFGFFVQAIVTGKGPLENLADHLADPVANN 104
>gi|225457685|ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic [Vitis vinifera]
gi|297745621|emb|CBI40786.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y +E++HARWAML A G ++PE + GA E VW++ G L G+TL+Y G IP
Sbjct: 154 YFNFEILHARWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLG--IPG 211
Query: 78 ------INLVFAVIAEIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAK 122
++ I + +L+ G EY R LE D +PGG FDPL L+K
Sbjct: 212 FHFAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSK 271
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
DP F LKVKEIKNGRLAM A LGF++QA TG+GPV+NL HL+DPF NNLL++
Sbjct: 272 DPVAFEELKVKEIKNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNNLLSIFK 329
>gi|170409|gb|AAA34150.1| chlorophyll a/b-binding protein Cab-1A, partial [Solanum
lycopersicum]
gi|170414|gb|AAA34152.1| chlorophyll a/b-binding protein Cab-1C, partial [Solanum
lycopersicum]
Length = 116
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 14 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 73
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 74 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 104
>gi|224284808|gb|ACN40134.1| unknown [Picea sitchensis]
Length = 208
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 58/62 (93%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQAYELIHARWAMLGAAGFIIPEAFNKFGA CGPEAVWFKTGALLLDG TL+YFG +IPI
Sbjct: 133 YQAYELIHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPI 192
Query: 79 NL 80
N
Sbjct: 193 NF 194
>gi|224100797|ref|XP_002312019.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|222851839|gb|EEE89386.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 244
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLL-DGNTLNYFGKNIP 77
Y+ ELIH RWAML G +IPEA W K G Y G+ +P
Sbjct: 83 YKESELIHCRWAMLAVPGILIPEALGL--------GNWVKAQEWAAAPGGQATYLGQPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ V+A E V + E+ R D E K +PGG FDPLG +KDP +F KVKEIK
Sbjct: 135 WGTLPTVLAIEFVAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGFSKDPKKFEEYKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 237
>gi|302807871|ref|XP_002985629.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146538|gb|EFJ13207.1| light-harvesting complex [Selaginella moellendorffii]
Length = 299
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 93/163 (57%), Gaps = 11/163 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G I E F W G + LD +YFG ++P
Sbjct: 146 FRECELIHGRWAMLATLGAIAVETFTG--------VTWQDAGKVELDQGP-SYFGFSLPF 196
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIKN 137
+ V E++++G E+ R T LD E +L+PGG FDPLGLA DP++ +LK+ EIK+
Sbjct: 197 TITALVWIEVLVIGFIEFQRNTE-LDPEKRLYPGGSYFDPLGLAADPERKEVLKLAEIKH 255
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
RLAM A GF +QA TG+GP++N HLSDP ++ S
Sbjct: 256 ARLAMVAAFGFAVQAAATGKGPLDNWVTHLSDPLHTTIIDTFS 298
>gi|302784975|ref|XP_002974259.1| light-harvesting complex [Selaginella moellendorffii]
gi|300157857|gb|EFJ24481.1| light-harvesting complex [Selaginella moellendorffii]
Length = 299
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 93/163 (57%), Gaps = 11/163 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G I E F W G + LD +YFG ++P
Sbjct: 146 FRECELIHGRWAMLATLGAIAVETFTG--------VTWQDAGKVELDQGP-SYFGFSLPF 196
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIKN 137
+ V E++++G E+ R T LD E +L+PGG FDPLGLA DP++ +LK+ EIK+
Sbjct: 197 TITALVWIEVLVIGFIEFQRNTE-LDPEKRLYPGGSYFDPLGLAADPERKEVLKLAEIKH 255
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
RLAM A GF +QA TG+GP++N HLSDP ++ S
Sbjct: 256 ARLAMVAAFGFAVQAAATGKGPLDNWVTHLSDPLHTTIIDTFS 298
>gi|12240089|gb|AAG49561.1| light-harvesting chlorophyll-binding protein [Citrus reticulata]
Length = 156
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 85/130 (65%), Gaps = 6/130 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G I
Sbjct: 28 EVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 86
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G E D L+PGG FDPLGLA PDQFA LKVKE+KN
Sbjct: 87 ILAIWACQVVLMGFVEGYRIGGGPLGEGLDPLYPGGAFDPLGLADGPDQFAELKVKELKN 146
Query: 138 GRLAMFAMLG 147
GRLAMF+M G
Sbjct: 147 GRLAMFSMFG 156
>gi|170421|gb|AAA34155.1| chlorophyll a/b-binding protein Cab-3A, partial [Solanum
lycopersicum]
gi|170426|gb|AAA34157.1| chlorophyll a/b-binding protein Cab-3B, partial [Solanum
lycopersicum]
Length = 116
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 14 CQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 73
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 74 SMFGFFVQAIVTGKGPLENLADHIADPVNNN 104
>gi|225580691|gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
[Dunaliella salina]
Length = 228
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 88/159 (55%), Gaps = 9/159 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAMLGAAG + E W+ + G+ +FG +P
Sbjct: 71 YREAELIHCRWAMLGAAGCLAVEVLGL--------GNWYDAPLWAVTGDKPTWFGIEVPF 122
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
++ + E+V + AE R N D+E +L+PGG FDPLG +KDP F K+KE+KNG
Sbjct: 123 DIATILGVEVVAMAVAEGLRNDN-QDMEKRLYPGGAFDPLGFSKDPKSFEDKKLKELKNG 181
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
RLAM A LGF Q TG+ +E L HLS PF NN T
Sbjct: 182 RLAMVACLGFAGQHAATGKPILEALGDHLSSPFFNNFAT 220
>gi|305377032|dbj|BAJ15879.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 129
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
+++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF
Sbjct: 27 CQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 86
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 87 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 117
>gi|169199|gb|AAA33703.1| Major Cab protein [Petunia x hybrida]
Length = 136
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 56 WFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLH 110
W + + L+Y G I + AV A ++VL+G E YR+ G ++ D L
Sbjct: 1 WIPAVSQIFSEGELDYLGNPSLIHAQSILAVWACQVVLMGAVEGYRVAGGPLGEVIDPLC 60
Query: 111 PGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP ENLA HL+DP
Sbjct: 61 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPFENLADHLADP 120
Query: 171 FANN 174
NN
Sbjct: 121 VNNN 124
>gi|169197|gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
Length = 125
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YR+ G ++ D L+PGG FDPLGLA+DP+ FA LKVKEIKNGRLAMF
Sbjct: 23 CQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMF 82
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 83 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 113
>gi|169201|gb|AAA33704.1| Major Cab protein [Petunia x hybrida]
Length = 129
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YR+ G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF
Sbjct: 29 CQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 88
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 89 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 119
>gi|20788|emb|CAA41404.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 246
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G +IPEA N W + G+ YFG +P
Sbjct: 84 YKESELIHCRWAMLAVPGMLIPEALGL--GNWVEAQKW-----AAIPGSQATYFGVPVPW 136
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ V+A E + + E R NG D E + +PGG FDPLG +KDP +F KVKEIK
Sbjct: 137 GYLPIVLAVEFLAIAFVESQR--NGEPDPEKRKYPGGAFDPLGFSKDPVKFKEYKVKEIK 194
Query: 137 NGRLAMFAMLGFFLQAYVT-GEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF +QA G GP+ENLA HLSDP+ N+ +I
Sbjct: 195 NGRLALLAFVGFCVQASANPGTGPLENLATHLSDPWHRNIAEII 238
>gi|116784661|gb|ABK23427.1| unknown [Picea sitchensis]
gi|116785117|gb|ABK23601.1| unknown [Picea sitchensis]
Length = 247
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G +IPEA N W + GN Y G +P
Sbjct: 85 YKESELIHCRWAMLAVPGVLIPEALGL--GNWVEAQKW-----AAIPGNQATYLGAPVPW 137
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E R NG D E + +PGG FDPLG +KDP +F KVKEIK
Sbjct: 138 GYLPVILAVEFLSIAFVESQR--NGEPDPEKRKYPGGAFDPLGFSKDPAKFKEYKVKEIK 195
Query: 137 NGRLAMFAMLGFFLQAYVT-GEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF +QA G GP+ENLA HLSDP+ N+ +I
Sbjct: 196 NGRLALLAFVGFCVQASANPGTGPLENLATHLSDPWHKNIAEII 239
>gi|116794024|gb|ABK26977.1| unknown [Picea sitchensis]
Length = 247
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G +IPEA N W + GN Y G +P
Sbjct: 85 YKESELIHCRWAMLAVPGVLIPEALGL--GNWVEAQKW-----AAIPGNQATYLGAPVPW 137
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E R NG D E + +PGG FDPLG +KDP +F KVKEIK
Sbjct: 138 GYLPVILAVEFLSIAFVESQR--NGEPDPEKRKYPGGAFDPLGFSKDPAKFKEYKVKEIK 195
Query: 137 NGRLAMFAMLGFFLQAYVT-GEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF +QA G GP+ENLA HLSDP+ N+ +I
Sbjct: 196 NGRLALLAFVGFCVQASANPGTGPLENLATHLSDPWHKNIAEII 239
>gi|116792703|gb|ABK26463.1| unknown [Picea sitchensis]
Length = 251
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 90/155 (58%), Gaps = 29/155 (18%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G +
Sbjct: 111 EVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPNLVHAQS 169
Query: 81 VFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGR 139
+ A++A +++L+G E YR+ G PLG +VKE+KNGR
Sbjct: 170 ILAILACQVILMGAIEGYRVAGG--------------PLG-----------EVKELKNGR 204
Query: 140 LAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
LAMF+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 205 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 239
>gi|356532722|ref|XP_003534920.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 125
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 87 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFA 144
+++L+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+
Sbjct: 24 QVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFS 83
Query: 145 MLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 84 MFGFFVQAIVTGKGPLENLADHLADPVNNN 113
>gi|222424528|dbj|BAH20219.1| AT3G54890 [Arabidopsis thaliana]
Length = 159
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K L G Y G +P
Sbjct: 1 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAALPGGQATYLGNPVP 52
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP + LKVKEIK
Sbjct: 53 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIK 111
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++
Sbjct: 112 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 155
>gi|388491152|gb|AFK33642.1| unknown [Lotus japonicus]
Length = 241
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH RWAML G ++PEA W K L G Y G +P
Sbjct: 83 FKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAALPGGQATYLGNPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ V+A E + + E+ R D E K +PGG FDPLG +KDP +F KVKEIK
Sbjct: 135 WGTLPTVLAIEFLAISFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ V+
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVL 237
>gi|20790|emb|CAA41405.1| Type 1 chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 207
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G +IPEA N W + G+ YFG +P
Sbjct: 45 YKESELIHCRWAMLAVPGMLIPEALGL--GNWVEAQKW-----AAIPGSQATYFGVPVPW 97
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ V+A E + + E R NG D E + +PGG FDPLG +KDP +F KVKEIK
Sbjct: 98 GYLPIVLAVEFLAIAFVESQR--NGEPDPEKRKYPGGAFDPLGFSKDPVKFKEYKVKEIK 155
Query: 137 NGRLAMFAMLGFFLQAYVT-GEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF +QA G GP+ENLA HLSDP+ N+ +I
Sbjct: 156 NGRLALLAFVGFCVQASANPGTGPLENLATHLSDPWHRNIAEII 199
>gi|312282193|dbj|BAJ33962.1| unnamed protein product [Thellungiella halophila]
Length = 241
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K L G Y G +P
Sbjct: 83 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAALPGGQATYLGNPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP +F LKVKEIK
Sbjct: 135 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ N+ ++
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHKNIGDIV 237
>gi|13265501|gb|AAG40043.2|AF324692_1 AT3g54890 [Arabidopsis thaliana]
Length = 241
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K L G Y G +P
Sbjct: 83 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAALPGGQATYLGNPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP + LKVKEIK
Sbjct: 135 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 237
>gi|15233115|ref|NP_191049.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
gi|75220543|sp|Q01667.1|CAB6_ARATH RecName: Full=Chlorophyll a-b binding protein 6, chloroplastic;
AltName: Full=LHCI-730; AltName: Full=LHCII type III
CAB-6; AltName: Full=Light-harvesting complex protein
Lhca1; Flags: Precursor
gi|268612158|pdb|2WSC|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612176|pdb|2WSE|1 Chain 1, Improved Model Of Plant Photosystem I
gi|268612194|pdb|2WSF|1 Chain 1, Improved Model Of Plant Photosystem I
gi|11762180|gb|AAG40368.1|AF325016_1 AT3g54890 [Arabidopsis thaliana]
gi|11908038|gb|AAG41448.1|AF326866_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642856|gb|AAK00370.1|AF339688_1 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|13605732|gb|AAK32859.1|AF361847_1 AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|16207|emb|CAA39534.1| chlorophyll A/B-binding protein [Arabidopsis thaliana]
gi|166644|gb|AAA32759.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|4678304|emb|CAB41095.1| chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|17979245|gb|AAL49939.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|20453135|gb|AAM19809.1| AT3g54890/F28P10_130 [Arabidopsis thaliana]
gi|23507771|gb|AAN38689.1| At3g54890/F28P10_130 [Arabidopsis thaliana]
gi|332645785|gb|AEE79306.1| light-harvesting complex I chlorophyll a/b binding protein 1
[Arabidopsis thaliana]
Length = 241
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K L G Y G +P
Sbjct: 83 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAALPGGQATYLGNPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP + LKVKEIK
Sbjct: 135 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 237
>gi|388521809|gb|AFK48966.1| unknown [Lotus japonicus]
Length = 241
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH RWAML G ++PEA W K L G Y G +P
Sbjct: 83 FKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAALPGGQATYLGNPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ V+A E + + E+ R D E K +PGG FDPLG +KDP +F KVKEIK
Sbjct: 135 RGTLPTVLAIEFLAISFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ V+
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVL 237
>gi|209778961|gb|ACI87791.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 124
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 81/120 (67%), Gaps = 5/120 (4%)
Query: 53 EAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--D 107
EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G E D
Sbjct: 5 EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLD 64
Query: 108 KLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL H
Sbjct: 65 PLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHF 124
>gi|226872|prf||1609235A chlorophyll a/b binding protein
Length = 273
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 101/178 (56%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 100 EVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL--- 155
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLAK 122
+ E+ L+G AE+ R + L LE D +PGGP F+PLG K
Sbjct: 156 --FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGK 213
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KEIKNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 214 DEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLK 271
>gi|224109746|ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222864338|gb|EEF01469.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
Length = 243
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 90/163 (55%), Gaps = 10/163 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G ++PEA N W T G Y G+ +P
Sbjct: 82 YKESELIHCRWAMLAVPGILVPEALGL--GNWVKAQEWAAT-----PGGQATYLGQPVPW 134
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ ++A E V + E+ R D E K +PGG FDPLG +KDP +F KVKEIKN
Sbjct: 135 GTLPIILAIEFVAIAFVEHQRSMEK-DTEKKKYPGGAFDPLGYSKDPQKFEEYKVKEIKN 193
Query: 138 GRLAMFAMLGFFLQAYV-TGEGPVENLAKHLSDPFANNLLTVI 179
GRLA+ A +G +Q G GP+ENLA HL+DP+ NN+ V+
Sbjct: 194 GRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDVL 236
>gi|116784586|gb|ABK23400.1| unknown [Picea sitchensis]
gi|148907739|gb|ABR16996.1| unknown [Picea sitchensis]
gi|224284102|gb|ACN39788.1| unknown [Picea sitchensis]
Length = 247
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ ELIH RWAML G +IPEA N W + G Y G +P
Sbjct: 85 YKESELIHCRWAMLAVPGVLIPEALGL--GNWVEAQKW-----AAIPGGQATYLGVPVPW 137
Query: 79 NLVFAVIAEIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
F +I I + A NG DLE + +PGG FDPLG +KDP +F KVKEIKN
Sbjct: 138 GY-FPIILSIFFLKMAFAESQRNGEPDLEKRKYPGGAFDPLGFSKDPAKFEEYKVKEIKN 196
Query: 138 GRLAMFAMLGFFLQAYVT-GEGPVENLAKHLSDPFANNLLTVI 179
GRLA+ A +GF +QA G GP+ENLA HLSDP+ N+ +I
Sbjct: 197 GRLALLAFVGFCVQASANPGTGPLENLATHLSDPWHKNIAEII 239
>gi|115813|sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
AltName: Full=LHCI type III CAB-8; Flags: Precursor
gi|19182|emb|CAA33330.1| Type III chlorophyll a/b-binding protein [Solanum lycopersicum]
Length = 273
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 101/178 (56%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 100 EVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL--- 155
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLAK 122
+ E+ L+G AE+ R + L LE D +PGGP F+PLG K
Sbjct: 156 --FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGK 213
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KEIKNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 214 DEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLK 271
>gi|118489398|gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 283
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 99/164 (60%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 130 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 179
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ ++ E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 180 FSITTLILIEVLVIGYIEFQRNAE-LDPEKRLYPGGNFFDPLGLAADPEKKATLQLAEIK 238
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF +QA+VTG+GP+ N A HLSDP ++ +S
Sbjct: 239 HARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLHTTIIDTLS 282
>gi|115769|sp|P12327.1|CB21_EUGGR RecName: Full=Chlorophyll a-b binding protein of LHCII type 1;
AltName: Full=Chlorophyll a-b binding protein of LHCII
type I; Short=CAB; Short=LHCP
gi|829262|emb|CAA29821.1| chlorophyll a/b protein (128 AA) [Euglena gracilis]
Length = 127
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 80/115 (69%), Gaps = 10/115 (8%)
Query: 81 VFAVIA-EIVLVGGAEYYRITN------GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVK 133
+ A++A +++L+G E YR N G DL D+L+PGGPFDPLGLA DPD F LKVK
Sbjct: 11 LLAILATQVLLMGAVEGYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFPELKVK 69
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERAPT 188
EIKNGRLAM MLGF+ QA VTGEGPVEN HL DP A+N LT + + APT
Sbjct: 70 EIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALV--TQFAPT 122
>gi|224140409|ref|XP_002323575.1| predicted protein [Populus trichocarpa]
gi|222868205|gb|EEF05336.1| predicted protein [Populus trichocarpa]
Length = 283
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 99/164 (60%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 130 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 179
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ ++ E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 180 FSITTLILIEVLVIGYIEFQRNAE-LDPEKRLYPGGNFFDPLGLAADPEKKATLQLAEIK 238
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF +QA+VTG+GP+ N A HLSDP ++ +S
Sbjct: 239 HARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLHTTIIDTLS 282
>gi|322812534|pdb|3PL9|A Chain A, Crystal Structure Of Spinach Minor Light-Harvesting
Complex Cp29 At 2.80 Angstrom Resolution
Length = 243
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 92 FRECELIHGRWAMLATLGALTVEGLTGI--------TWQDAGKVELIEGSS--YLGQPLP 141
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ +L++ EIK+
Sbjct: 142 FSMTTLIWIEVLVIGYIEFQRNAE-LDTEKRLYPGGTFDPLGLASDPEKKPILQLAEIKH 200
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
RLAM LGF +QA VTG+GP+ N HLSDP +L
Sbjct: 201 ARLAMVGFLGFAVQAAVTGKGPLNNWVTHLSDPLHTTIL 239
>gi|242060664|ref|XP_002451621.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
gi|241931452|gb|EES04597.1| hypothetical protein SORBIDRAFT_04g004770 [Sorghum bicolor]
Length = 245
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G Y G +P
Sbjct: 84 FKESEVYHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGNPVP 135
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+L ++ E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 136 WGSLPTILVIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIK 194
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 195 NGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 238
>gi|449442612|ref|XP_004139075.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
gi|449532766|ref|XP_004173351.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like
[Cucumis sativus]
Length = 273
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 100/178 (56%), Gaps = 28/178 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGAAG I PE F G PE WFKTG + G T NY+ P L
Sbjct: 100 EVINGRFAMLGAAGAIAPEIFGSLGL-IPPETALPWFKTGVIPPAG-TYNYWAD--PYTL 155
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L LE D +PGGP F+PLG
Sbjct: 156 F---VFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFG 212
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KD LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HLSDP NN+LT +
Sbjct: 213 KDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL 270
>gi|413935742|gb|AFW70293.1| LOW QUALITY PROTEIN: hypothetical protein ZEAMMB73_802965, partial
[Zea mays]
Length = 273
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G Y G +P
Sbjct: 84 FKESEVYHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGAPVP 135
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 136 WGTLPTILVIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIK 194
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 195 NGRLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDII 238
>gi|357495589|ref|XP_003618083.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519418|gb|AET01042.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 573
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 101/177 (57%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 400 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYNYWADNYTL--- 455
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ +G AE+ R+ + L LE L +PGGP F+PLG K
Sbjct: 456 --FVMEMAFMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGK 513
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 514 DEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSL 570
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 101/178 (56%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 104 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYNYWADNYTL--- 159
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ +G AE+ R + L LE L +PGGP F+PLG K
Sbjct: 160 --FVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGK 217
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT ++
Sbjct: 218 DEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSLN 275
>gi|302144191|emb|CBI23318.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 90/158 (56%), Gaps = 28/158 (17%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 97 RALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 156
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ AV+ ++VL+G E YRI NGL PG LKVKEIK
Sbjct: 157 AQSILAVLGFQVVLMGLVEGYRI-NGL-------PG-----------------LKVKEIK 191
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 192 NGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 229
>gi|302804514|ref|XP_002984009.1| light-harvesting complex [Selaginella moellendorffii]
gi|300148361|gb|EFJ15021.1| light-harvesting complex [Selaginella moellendorffii]
Length = 246
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G +IPEA N W T G Y G +P
Sbjct: 86 FKESELIHCRWAMLAVPGCLIPEALGL--GNWVEAQQWAAT-----PGGQATYLGTPVPW 138
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ +IA E V + E RI E + +PGG FDPLG +KDP +F K+KE+KN
Sbjct: 139 GTLPVIIAIEFVAIAFVESRRI-GVPSAEKRKYPGGAFDPLGFSKDPKKFEEFKLKEVKN 197
Query: 138 GRLAMFAMLGFFLQAYV-TGEGPVENLAKHLSDPFANNLLTVI 179
GRLA+ A LGF QA G GP++NLA HL+DP+ NN+ +I
Sbjct: 198 GRLALLAFLGFCAQAAAYPGTGPLQNLATHLADPWHNNIANII 240
>gi|226503327|ref|NP_001148183.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195612072|gb|ACG27866.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|195616508|gb|ACG30084.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|223975041|gb|ACN31708.1| unknown [Zea mays]
gi|413935743|gb|AFW70294.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 245
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G Y G +P
Sbjct: 84 FKESEVYHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGAPVP 135
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 136 WGTLPTILVIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIK 194
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 195 NGRLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDII 238
>gi|297820242|ref|XP_002878004.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
gi|297323842|gb|EFH54263.1| hypothetical protein ARALYDRAFT_485905 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K + G Y G +P
Sbjct: 83 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAAVPGGQATYLGNPVP 134
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP + LKVKEIK
Sbjct: 135 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++
Sbjct: 194 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 237
>gi|149242540|pdb|2O01|1 Chain 1, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 187
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K L G Y G +P
Sbjct: 35 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAALPGGQATYLGNPVP 86
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP + LKVKEIK
Sbjct: 87 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIK 145
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNL 175
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+
Sbjct: 146 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 185
>gi|302144193|emb|CBI23320.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 90/158 (56%), Gaps = 28/158 (17%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 92 RALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 151
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ AV+ ++VL+G E YRI NGL PG LKVKEIK
Sbjct: 152 AQSILAVLGFQVVLMGLVEGYRI-NGL-------PG-----------------LKVKEIK 186
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 187 NGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 224
>gi|405615|emb|CAA43803.1| LHC II Type III chlorophyll a/b binding protein [Brassica napus]
Length = 267
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 95/159 (59%), Gaps = 6/159 (3%)
Query: 21 AYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPI 78
A E+I+ RWAMLGA G I PE K+ E VWFK G+ + L+Y G +
Sbjct: 95 ALEVIYGRWAMLGAFGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHA 154
Query: 79 NLVFAVIA-EIVLVGGAEYYRIT--NGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKE 134
+ AV+ +++L+G E +RI +G+ + L+PGG FD L L D F LKVKE
Sbjct: 155 QSILAVLGFQVILMGLVEGFRINRFDGVGEGNDLYPGGKYFDLLSLVDDQVTFVELKVKE 214
Query: 135 IKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
IKNG LAMF+M GFF+QA VTG+ P+E+L HL + AN
Sbjct: 215 IKNGMLAMFSMFGFFVQAIVTGKDPLESLLDHLDNFVAN 253
>gi|356559472|ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Glycine max]
Length = 246
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH RWAML G ++PEA W K + G Y G +P
Sbjct: 85 FKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGNPVP 136
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP F KVKEIK
Sbjct: 137 WGTLPTILAIEFLAISFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIK 195
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ VI
Sbjct: 196 NGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNVI 239
>gi|388515199|gb|AFK45661.1| unknown [Medicago truncatula]
Length = 277
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 100/177 (56%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 104 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYNYWADNYTL--- 159
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ +G AE+ R + L LE L +PGGP F+PLG K
Sbjct: 160 --FVMEMAFMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGK 217
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 218 DEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSL 274
>gi|255076759|ref|XP_002502049.1| chlorophyll a/b-binding protein [Micromonas sp. RCC299]
gi|226517314|gb|ACO63307.1| chlorophyll a/b-binding protein [Micromonas sp. RCC299]
Length = 393
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 97/163 (59%), Gaps = 16/163 (9%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGN--TLNYFGK-- 74
Y+ EL+H RWAMLG G +PEA +FG E VW+K GA L+ L+Y G
Sbjct: 222 YRELELLHGRWAMLGVVGAAVPEALARFGGLELGEPVWWKVGAAKLNSPDLALDYLGLGG 281
Query: 75 -NIPINLVFAVIA--EIVLVGGAEYYR-------ITNGLDLE-DKLHPGG-PFDPLGLAK 122
+I + AVIA ++VL+GG EY R + G+ L D+ +PGG PFDP G++
Sbjct: 282 FHIAGSSGLAVIAACQLVLMGGPEYARKVGIDSLVPVGVYLPGDRDYPGGAPFDPFGVSA 341
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 165
D F KV E+K+GRLAM AMLG F QA+ TG GPVENL +
Sbjct: 342 DAAVFERQKVAEMKHGRLAMVAMLGCFAQAWATGVGPVENLTE 384
>gi|115467828|ref|NP_001057513.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|3789954|gb|AAC67558.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|54290899|dbj|BAD61582.1| chlorophyll a/b-binding protein precursor [Oryza sativa Japonica
Group]
gi|113595553|dbj|BAF19427.1| Os06g0320500 [Oryza sativa Japonica Group]
gi|125597037|gb|EAZ36817.1| hypothetical protein OsJ_21156 [Oryza sativa Japonica Group]
gi|215686348|dbj|BAG87609.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704347|dbj|BAG93781.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 241
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W + + G Y G +P
Sbjct: 80 FKESEVYHCRWAMLAVPGVLVPEALGL--------GNWVQAQEWAAEPGGQATYLGNPVP 131
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 132 WGTLPTILVIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIK 190
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HLSDP+ NN+ +I
Sbjct: 191 NGRLAMLAFVGFCVQQSAYPGTGPLENLASHLSDPWHNNIGDII 234
>gi|357468737|ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355505708|gb|AES86850.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 347
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G+T Y G+ +P
Sbjct: 193 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGST--YLGQPLP 242
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 243 FSITTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIK 301
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 302 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 347
>gi|217072728|gb|ACJ84724.1| unknown [Medicago truncatula]
gi|388501002|gb|AFK38567.1| unknown [Medicago truncatula]
Length = 289
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G+T Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGST--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 185 FSITTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 244 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 289
>gi|305377030|dbj|BAJ15878.1| chlorophyll a/b binding protein-like protein [Torenia fournieri]
Length = 125
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
+++L+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF
Sbjct: 23 CQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMF 82
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA L+DP NN
Sbjct: 83 SMFGFFVQAIVTGKGPLENLADGLADPVNNN 113
>gi|75265661|sp|Q9SDM1.1|CB121_HORVU RecName: Full=Chlorophyll a-b binding protein 1B-21, chloroplastic;
AltName: Full=LHCI type I CAB-1B-21; AltName:
Full=LHCI-730 chlorophyll a/b binding protein; AltName:
Full=Light-harvesting complex I 21 kDa protein; Flags:
Precursor
gi|6685157|gb|AAF23819.1|AF218305_2 chlorophyll a/b binding protein precursor [Hordeum vulgare]
Length = 245
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG--ALLLDGNTLNYFGKNI 76
++ E+ H RWAML G ++PEA W K A L DG Y G +
Sbjct: 83 FKESEIYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAALPDGQA-TYLGNPV 133
Query: 77 PI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEI 135
P NL + E + + AE R T D E K +PGG FDPLG +KDP +F LK+KEI
Sbjct: 134 PWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEI 192
Query: 136 KNGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KNGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++
Sbjct: 193 KNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 237
>gi|225449078|ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
isoform 1 [Vitis vinifera]
gi|147800947|emb|CAN75566.1| hypothetical protein VITISV_032585 [Vitis vinifera]
Length = 244
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA W + + G Y G +P
Sbjct: 83 YKESELIHCRWAMLAVPGVLVPEALGL--------GNWVQAQEWAAIPGGQATYLGNPVP 134
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E + + E+ R D E K +PGG FDPLG +KDP +F KVKEIK
Sbjct: 135 WGNLPTILAIEFLAIAFVEHQRSMEK-DTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ VI
Sbjct: 194 NGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVI 237
>gi|459020|gb|AAA16605.1| light harvesting chlorophyll a/b binding protein of PSII, partial
[Euglena gracilis]
Length = 322
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ E+IHARWAMLGA G + PE G G AVW+K GA + + LNY G I
Sbjct: 197 YREAEVIHARWAMLGALGVVTPELLAGNGVPFGEGAVWYKAGAQIFSADGLNYLGNPSLI 256
Query: 79 ---NLVFAVIAEIVLVGGAEYYRITNGLDLED---KLHPGGPFDPLGLAKDPDQFALLKV 132
++V ++ + ++G E YR G L D +L+PGGPFDPLGLA DPD FA LKV
Sbjct: 257 HAQSVVLTFLSTLAIMGAVEGYRYGGGWPLGDDLDRLYPGGPFDPLGLANDPDAFAELKV 316
Query: 133 KEIKNG 138
KE+KNG
Sbjct: 317 KEVKNG 322
>gi|225690802|gb|ACO06087.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 291
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 91/166 (54%), Gaps = 14/166 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG--ALLLDGNTLNYFGKNI 76
++ E+ H RWAML G ++PEA W K A L DG Y G +
Sbjct: 108 FKESEIYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAALPDGQA-TYLGNPV 158
Query: 77 PI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEI 135
P NL + E + + AE R T D E K +PGG FDPLG +KDP +F LK+KEI
Sbjct: 159 PWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEI 217
Query: 136 KNGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
KNGRLAM A +GF + Q+ G GP+ENLA HL+DP+ N T S
Sbjct: 218 KNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNTSATSSS 263
>gi|357124424|ref|XP_003563900.1| PREDICTED: chlorophyll a-b binding protein 1B-21,
chloroplastic-like [Brachypodium distachyon]
Length = 247
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG--ALLLDGNTLNYFGKNI 76
++ E+ H RWAML G ++PEA W K A L DG YFG +
Sbjct: 85 FKESEIYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAALPDGQA-TYFGVPV 135
Query: 77 PI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEI 135
P NL + E + + AE R T D E K +PGG FDPLG +KDP +F LK+KEI
Sbjct: 136 PWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEI 194
Query: 136 KNGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KNGRLAM A +GF + Q+ G GP+ENL HL+DP+ NN+ ++
Sbjct: 195 KNGRLAMLAFVGFCVQQSAYPGTGPLENLGAHLADPWHNNIGDIV 239
>gi|297829418|ref|XP_002882591.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata]
gi|297328431|gb|EFH58850.1| LHCB4.2 [Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G I E W G + L+DG++ Y G+ +P
Sbjct: 133 FRECELIHGRWAMLATLGAITVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 182
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E+++VG E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 183 FSISTLIWIEVLVVGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPEKKAQLQLAEIK 241
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 242 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
>gi|1165248|gb|AAA85589.1| chlorophyll a/b binding protein of PS II, partial [Picea abies]
Length = 131
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
+++L+G E YR+ G ++ D ++PGG FDPLGLA DPD FA LKVKE+KNGRLAMF
Sbjct: 29 CQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKELKNGRLAMF 88
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ NLA HL+DP NN
Sbjct: 89 SMFGFFVQAIVTGKGPLXNLADHLADPVNNN 119
>gi|312281599|dbj|BAJ33665.1| unnamed protein product [Thellungiella halophila]
Length = 288
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 133 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 182
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 183 FSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPEKTAQLQLAEIK 241
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S ++
Sbjct: 242 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 288
>gi|384247026|gb|EIE20514.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
C-169]
Length = 229
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
+Q EL+H+RWAM G AG + GA + W++ ++G Y G +P
Sbjct: 71 FQEAELVHSRWAMAGVAGAL--------GAELLGQGDWYQAPLWAVNGGAPTYLGIPVPF 122
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
NL + E V + GAE R D E + +PGG FDPLG +KD K+KE+KNG
Sbjct: 123 NLSTLLAIEFVAIAGAEAQRNAE-PDAEKRKYPGGAFDPLGFSKDSKVLEENKLKELKNG 181
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
RLAM A +GF Q TG+GP+E L HL+DP+ N T
Sbjct: 182 RLAMLAFVGFIAQHAATGKGPLEALKLHLADPWGANFAT 220
>gi|159476206|ref|XP_001696202.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|40714515|dbj|BAD06921.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
gi|158282427|gb|EDP08179.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 243
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 94/170 (55%), Gaps = 14/170 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQ ELIH R AM G AG +IP K GA PE W+ G + ++ N+ +G + +
Sbjct: 69 YQQAELIHCRTAMAGVAGILIPGLLTKAGALNVPE--WYDAGKVAIE-NSFAPWGSLLAV 125
Query: 79 NLVFAVIAEI-----VLVGGAE-----YYRITNGLDLEDKL-HPGGPFDPLGLAKDPDQF 127
L E + G++ + L +L +PGGPFDPLGL+K+ D++
Sbjct: 126 QLFLCGFVEAKRWQDIRKPGSQGEPGSFLGFEASLKGTSELGYPGGPFDPLGLSKEADKW 185
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
A K+KE+KNGRLAM A LGF Q Y TG GPV+NLA HL DP+ N T
Sbjct: 186 ADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLAAHLKDPWHVNYAT 235
>gi|544700|gb|AAB29485.1| light-harvesting complex I, partial (chloroplast) [Hordeum vulgare]
Length = 221
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 14/165 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG--ALLLDGNTLNYFGKNI 76
++ E+ H RWAML G ++PEA W K A L DG Y G +
Sbjct: 59 FKESEIYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAALPDGQA-TYLGNPV 109
Query: 77 PI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEI 135
P NL + E + + AE R T D E K +PGG FDPLG +KDP +F LK+KEI
Sbjct: 110 PWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEI 168
Query: 136 KNGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KNGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++
Sbjct: 169 KNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 213
>gi|87313219|gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein Lhca4
[Chlamydomonas incerta]
Length = 237
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQ ELIH R AM G AG +IP K GA PE W+ G + ++ N+ +G + +
Sbjct: 63 YQQAELIHCRTAMTGVAGILIPGLLTKAGALNVPE--WYDAGKVAIE-NSFAPWGTLLAV 119
Query: 79 NLVFAVIAEIV----LVGGAEYYRITNGLDLEDKL-------HPGGPFDPLGLAKDPDQF 127
L E+ + + L E L +PGGPFDPLGL+K+ D++
Sbjct: 120 QLFLCGFVEVKRWQDIRKPGSQGEPGSFLGFESSLKGTSEVGYPGGPFDPLGLSKEADKW 179
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
A K+KE+KNGRLAM A LGF Q Y TG GPV+NL HL DP+ N T
Sbjct: 180 ADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLVAHLKDPWHVNYAT 229
>gi|297810243|ref|XP_002873005.1| chlorophyll a/b-binding protein CP29 [Arabidopsis lyrata subsp.
lyrata]
gi|297318842|gb|EFH49264.1| chlorophyll a/b-binding protein CP29 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 137 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 186
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E+++VG E+ R LD E +L+PGG FDPLGLA DP++ A L++ EIK
Sbjct: 187 FSISTLIWIEVLVVGYIEFQRNAE-LDSEKRLYPGGKYFDPLGLAADPEKRAQLQLAEIK 245
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 246 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 291
>gi|224090986|ref|XP_002309134.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
gi|118489077|gb|ABK96345.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222855110|gb|EEE92657.1| light-harvesting complex II protein Lhcb4 [Populus trichocarpa]
Length = 285
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 132 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 181
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E V++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 182 FSITALIWIEAVIIGYIEFQRNAE-LDPEKRLYPGGQFFDPLGLASDPEKKATLQLAEIK 240
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF +QA+VTG+GP+ N A HLSDP ++ +S
Sbjct: 241 HARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLHTTIIDNLS 284
>gi|449452104|ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
gi|449525097|ref|XP_004169556.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
[Cucumis sativus]
Length = 246
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH RWAML G ++PEA W K + G Y G+ +P
Sbjct: 85 FKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGQPVP 136
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E + + E+ R D E K +PGG FDPLG +KDP++ KVKEIK
Sbjct: 137 WGTLPTILVIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPEKLKEYKVKEIK 195
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 196 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDII 239
>gi|255574383|ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223532494|gb|EEF34284.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 285
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 98/164 (59%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 132 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 181
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R + LD E +L+PGG F DPLGLA+DP++ A L++ EIK
Sbjct: 182 FSITTLIWIEVLVIGYIEFQRNSE-LDPEKRLYPGGKFFDPLGLAEDPEKKATLQLAEIK 240
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF +QA VTG+GP+ N A HLSDP ++ S
Sbjct: 241 HARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFS 284
>gi|223973225|gb|ACN30800.1| unknown [Zea mays]
Length = 196
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G Y G +P
Sbjct: 35 FKESEVYHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGAPVP 86
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 87 WGTLPTILVIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIK 145
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 146 NGRLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDII 189
>gi|13676408|dbj|BAB41193.1| type III chlorophyll a/b-binding protein [Amaranthus tricolor]
Length = 156
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 87/138 (63%), Gaps = 8/138 (5%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IP 77
+A E+IH RWAMLGA G I PE K+ E VWFK GA + L+Y G +
Sbjct: 20 RALEVIHGRWAMLGALGCITPEVLQKWVRVSFKEPVWFKAGAQIFSEGGLDYLGNPNLVH 79
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKV 132
+ AV+ ++VL+G E +RI NGLD + L+PGG FDPLGLA DP FA LKV
Sbjct: 80 AQSILAVLGFQVVLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVPFAELKV 138
Query: 133 KEIKNGRLAMFAMLGFFL 150
KEIKNGRLAMF+M GFF+
Sbjct: 139 KEIKNGRLAMFSMFGFFV 156
>gi|296086034|emb|CBI31475.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA W + + G Y G +P
Sbjct: 40 YKESELIHCRWAMLAVPGVLVPEALGL--------GNWVQAQEWAAIPGGQATYLGNPVP 91
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E + + E+ R D E K +PGG FDPLG +KDP +F KVKEIK
Sbjct: 92 WGNLPTILAIEFLAIAFVEHQRSMEK-DTEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIK 150
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ VI
Sbjct: 151 NGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVI 194
>gi|187609488|gb|ACD13267.1| chlorophyll a/b binding protein precursor [Phyllostachys
fimbriligula]
Length = 204
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 90/160 (56%), Gaps = 12/160 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G YFG +P
Sbjct: 53 FKESEVYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAAVPGGQATYFGVPVP 104
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 105 WGNLPTILAIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIK 163
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNL 175
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+
Sbjct: 164 NGRLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNI 203
>gi|20260162|gb|AAM12979.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
Length = 290
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIK 244
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290
>gi|15241005|ref|NP_195773.1| chlorophyll a-b binding protein CP29.1 [Arabidopsis thaliana]
gi|38502901|sp|Q07473.1|CB4A_ARATH RecName: Full=Chlorophyll a-b binding protein CP29.1,
chloroplastic; AltName: Full=LHCB4.1; AltName:
Full=LHCII protein 4.1; Flags: Precursor
gi|298036|emb|CAA50712.1| CP29 [Arabidopsis thaliana]
gi|7327812|emb|CAB82269.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|15081815|gb|AAK82562.1| AT5g01530/F7A7_50 [Arabidopsis thaliana]
gi|16323075|gb|AAL15272.1| AT5g01530/F7A7_50 [Arabidopsis thaliana]
gi|16648983|gb|AAL24343.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|20148703|gb|AAM10242.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|22137102|gb|AAM91396.1| At5g01530/F7A7_50 [Arabidopsis thaliana]
gi|110741014|dbj|BAE98601.1| Lhcb4- protein [Arabidopsis thaliana]
gi|332002974|gb|AED90357.1| chlorophyll a-b binding protein CP29.1 [Arabidopsis thaliana]
Length = 290
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIK 244
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290
>gi|449460307|ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Cucumis sativus]
gi|449516143|ref|XP_004165107.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Cucumis sativus]
Length = 284
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 98/164 (59%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 131 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 180
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA+DP++ A+L++ EIK
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIK 239
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF +QA VTG+GP+ N A HLSDP ++ S
Sbjct: 240 HARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFS 283
>gi|914283|gb|AAB34067.1| light-harvesting complex b type 2, Lhcb2 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 130 aa]
Length = 130
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 70/93 (75%), Gaps = 7/93 (7%)
Query: 86 AEIVLVGGAEYYRI----TNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLA 141
++VL+G E YRI + GLD L+PGG FDPLGLA DPD FA LKVKE+KNGRLA
Sbjct: 29 CQVVLMGFVEGYRIAGDPSGGLD---PLYPGGAFDPLGLADDPDAFAELKVKELKNGRLA 85
Query: 142 MFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
MF+M GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 86 MFSMFGFFVQAIVTGKGPIENLYDHLADPVNNN 118
>gi|168007695|ref|XP_001756543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692139|gb|EDQ78497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 79
+ EL++ RWAMLG G + PE N + G E VWF TGA + ++Y G IN
Sbjct: 73 RTQELMNGRWAMLGITGCLTPELINS-NSTPGFEPVWFNTGAQIFSDAGIDYLGVPGFIN 131
Query: 80 L--VFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEI 135
+FAVI + +L+G AEY RI + D +PGG FDPLG + DP+ A LKVKEI
Sbjct: 132 AHSLFAVIVVQALLMGLAEYARIKFVPEGADPFYPGGKTFDPLGFSSDPEILAELKVKEI 191
Query: 136 KNGRLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
KNGRLAM AM G F Q VTG P++NL L
Sbjct: 192 KNGRLAMMAMAGLFAQGAVTGVSPLQNLHDWL 223
>gi|77799163|gb|ABB03724.1| putative chloroplast chlorophyll A-B binding protein type II
[Sorghum bicolor]
Length = 113
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 2/91 (2%)
Query: 86 AEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
++VL+G E YR+ G E DK++PGG FDPLGLA DPD A LKVKE+KNGRLAMF
Sbjct: 11 GQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTAAELKVKELKNGRLAMF 70
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENL H++DP ANN
Sbjct: 71 SMFGFFVQAIVTGKGPIENLFDHVADPVANN 101
>gi|428230866|gb|AFY99055.1| chlorophyll binding protein, partial [Lobelia erinus]
Length = 197
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 102/178 (57%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE F K G A+ WF+TG + G + Y+ P L
Sbjct: 26 EVINGRFAMLGAAGAIAPEIFGKLGLIPAETALPWFQTGVIPPAG-SYTYWAD--PYTLF 82
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE D +PGGPF +PLG K
Sbjct: 83 ---VFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFAGSGDPAYPGGPFFNPLGFGK 139
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP +NN+LT +
Sbjct: 140 DEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVSNNVLTSLK 197
>gi|125555124|gb|EAZ00730.1| hypothetical protein OsI_22755 [Oryza sativa Indica Group]
Length = 241
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W + + G Y G +P
Sbjct: 80 FKESEVYHCRWAMLAVPGVLVPEALGL--------GNWVQAQEWAAEPGGQATYLGNPVP 131
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIK
Sbjct: 132 WGTLPTILVIEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIK 190
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A + F + Q+ G GP+ENLA HLSDP+ NN+ +I
Sbjct: 191 NGRLAMLAFVAFCVQQSAYPGTGPLENLASHLSDPWHNNIGDII 234
>gi|7271945|gb|AAF44702.1|AF241524_1 chlorophyll a/b-binding protein type I [Asarina barclaiana]
Length = 169
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 89/159 (55%), Gaps = 12/159 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA FG W K + G Y G +P
Sbjct: 20 YKESELIHCRWAMLAVPGILVPEALG-FGN-------WVKAQEWAAVPGGQATYLGNPVP 71
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E + + E+ R D E + +PGG FDPLG +KDP +F LKVKEIK
Sbjct: 72 WGTLPTILVIEFLAIAFVEHQRSMEK-DPEKRKYPGGAFDPLGYSKDPKKFEELKVKEIK 130
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANN 174
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ N
Sbjct: 131 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNK 169
>gi|15219941|ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|334183551|ref|NP_001185280.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|16649019|gb|AAL24361.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20260044|gb|AAM13369.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332195725|gb|AEE33846.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195727|gb|AEE33848.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 273
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 100/177 (56%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T Y+ N +
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYTYWADNYTL--- 155
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG K
Sbjct: 156 --FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK 213
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 214 DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
>gi|53793542|dbj|BAD52991.1| a/b-binding protein precursor-like [Oryza sativa Japonica Group]
Length = 98
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Query: 91 VGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 148
+G E YRI G ++ D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GF
Sbjct: 1 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
Query: 149 FLQAYVTGEGPVENLAKHLSDPFANN 174
F+QA VTG+GP+ENLA HL+DP NN
Sbjct: 61 FVQAIVTGKGPLENLADHLADPVNNN 86
>gi|297840405|ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
gi|297333925|gb|EFH64343.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 100/178 (56%), Gaps = 28/178 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGAAG I PE K G PE WF+TG + G T Y+ N +
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGL-IPPETALPWFQTGVIPPAG-TYTYWADNYTL-- 155
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLA 121
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG
Sbjct: 156 ---FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFG 212
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KD LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 213 KDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
>gi|157837283|gb|ABV82714.1| chloroplast chlorophyll a/b binding protein precursor
[Phyllostachys edulis]
Length = 246
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G YFG +P
Sbjct: 85 FKESEVYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAAVPGGQATYFGVPVP 136
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E + + AE+ R T D E K +PGG FDPLG +KDP + K+KEIK
Sbjct: 137 WGNLPTILAIEFLAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPVKLEEYKLKEIK 195
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ V+
Sbjct: 196 NGRLAMLAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVV 239
>gi|430947|gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 100/177 (56%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T Y+ N +
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYTYWADNYTL--- 155
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG K
Sbjct: 156 --FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK 213
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 214 DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
>gi|308809197|ref|XP_003081908.1| putative chlorophyll a/b-binding protein (ISS) [Ostreococcus tauri]
gi|63029305|gb|AAY27551.1| chloroplast Lhcq-like protein precursor [Ostreococcus tauri]
gi|116060375|emb|CAL55711.1| putative chlorophyll a/b-binding protein (ISS) [Ostreococcus tauri]
Length = 242
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 97/169 (57%), Gaps = 17/169 (10%)
Query: 12 QTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFG-ANCGPEAVWFKTGALLLDGNT-- 68
++ Y+ EL+H RWAMLG G +PE ++FG AN G E VW+K GA ++ +
Sbjct: 69 KSEDLERYRELELLHGRWAMLGVVGAAVPETLDRFGVANLG-EPVWWKVGAAKMNSDIAL 127
Query: 69 --LNYFGKNIPINLVFAVIA--EIVLVGGAEYYRITNGLDLE--------DKLHPGG-PF 115
L + G +I AVIA ++VL+GG EY R LE DK +PGG PF
Sbjct: 128 DYLGFSGFHIAGGSGIAVIAACQLVLMGGPEYARYVGINSLEPVGVYLPGDKDYPGGAPF 187
Query: 116 DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 164
DP + D ++F KV EIK+ RLAM A LG +QA VT +GP+ENLA
Sbjct: 188 DPFKFSDDAEEFEKQKVMEIKHCRLAMIAALGCAIQAIVTRQGPIENLA 236
>gi|351734432|ref|NP_001235996.1| uncharacterized protein LOC100305992 [Glycine max]
gi|255627211|gb|ACU13950.1| unknown [Glycine max]
Length = 240
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH WAML G ++PEA W K + G Y G +P
Sbjct: 79 FKESELIHCGWAMLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGNPVP 130
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R + G D E K +PGG FDPLG +KDP F KVKE+K
Sbjct: 131 WGTLPTILAIEFLAISFVEHQR-SMGKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKELK 189
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 190 NGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNII 233
>gi|125600703|gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japonica Group]
Length = 267
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 112 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 161
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 162 FSISTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIK 220
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM A LGF +QA TG+GP+ N A HLSDP + S ++
Sbjct: 221 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSSSS 267
>gi|226530077|ref|NP_001149586.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|194706946|gb|ACF87557.1| unknown [Zea mays]
gi|195628244|gb|ACG35952.1| chlorophyll a-b binding protein 6A [Zea mays]
gi|413926425|gb|AFW66357.1| chlorophyll a-b binding protein 6A [Zea mays]
Length = 249
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G Y G +P
Sbjct: 88 FKESEVYHCRWAMLAVPGVLVPEALGL--------GNWVKAQEWAAVPGGQATYLGAPVP 139
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E V + AE+ R T D E K +PGG FDPLG ++DP + K+KEIK
Sbjct: 140 WGTLPTILAVEFVAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSRDPAKLEEYKLKEIK 198
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 199 NGRLAMLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGDII 242
>gi|225440674|ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic
[Vitis vinifera]
gi|147784938|emb|CAN77492.1| hypothetical protein VITISV_010727 [Vitis vinifera]
Length = 288
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 13/160 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E+ W G + L++G++ Y G+ +P
Sbjct: 134 FRECELIHGRWAMLATLGALAVESLTG--------VTWQDAGKVELIEGSS--YLGQPLP 183
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A+L++ EIK
Sbjct: 184 FSMTTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLAADPEKKAVLQLAEIK 242
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
+ RLAM LGF +QA VTG+GP+ N A HLSDP ++
Sbjct: 243 HARLAMIGFLGFAVQAAVTGKGPLNNWATHLSDPLHTTII 282
>gi|255640167|gb|ACU20374.1| unknown [Glycine max]
Length = 276
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG G T NY+ + +
Sbjct: 103 EIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAG-TYNYWADSYTL--- 158
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGPF +PLG K
Sbjct: 159 --FVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGK 216
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 217 DEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLTDPVHNNILTSL 273
>gi|307106821|gb|EFN55066.1| hypothetical protein CHLNCDRAFT_35848 [Chlorella variabilis]
Length = 219
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ S ++ E+IH RWAMLGAAG + E +G W+ L+ G +
Sbjct: 57 KEAPSLQRFKESEVIHGRWAMLGAAGVLGVEVLG-YGN-------WYDAPLPLVQGGSAT 108
Query: 71 YFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAK-DPDQFAL 129
YFG +IP +L E + GAE +R + E +++PGGPFDP G++K + D+
Sbjct: 109 YFGASIPFDLGTLAAIEFAAMAGAESFR--GAAEPEKRVYPGGPFDPAGMSKGNQDE--- 163
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
L+ KEIKNGRLAM A LGF Q TG P+E L HL++P N T
Sbjct: 164 LRTKEIKNGRLAMIACLGFVAQHAATGASPLEALGAHLANPMVANFAT 211
>gi|59710172|gb|AAW88575.1| light harvesting protein [Eleusine coracana subsp. coracana]
Length = 64
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/64 (85%), Positives = 58/64 (90%)
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAER 185
Q ALLKVKEIKNGRLAMF+M FF+QAYVTG GPVENLAKHLSDPF NNLLTVISG AER
Sbjct: 1 QAALLKVKEIKNGRLAMFSMFAFFIQAYVTGGGPVENLAKHLSDPFGNNLLTVISGAAER 60
Query: 186 APTL 189
AP+L
Sbjct: 61 APSL 64
>gi|195613254|gb|ACG28457.1| chlorophyll a-b binding protein 8 [Zea mays]
gi|238013956|gb|ACR38013.1| unknown [Zea mays]
gi|413954858|gb|AFW87507.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 267
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 100/178 (56%), Gaps = 28/178 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGA G I PE F K G PE WFKTG + G T NY+ + +
Sbjct: 94 EVINGRYAMLGAVGAIAPEIFGKMGI-IPPETALPWFKTGVIPPAG-TYNYWADSYTL-- 149
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ + L+G AE+ R+ + L LE D +PGGP F+PLG
Sbjct: 150 ---FVFNMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKFLAGSGDPSYPGGPLFNPLGFG 206
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
K + LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 207 KTEKEMNELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSL 264
>gi|15231990|ref|NP_187506.1| chlorophyll a-b binding protein CP29.2 [Arabidopsis thaliana]
gi|38503262|sp|Q9XF88.1|CB4B_ARATH RecName: Full=Chlorophyll a-b binding protein CP29.2,
chloroplastic; AltName: Full=LHCB4.2; AltName:
Full=LHCII protein 4.2; Flags: Precursor
gi|4741954|gb|AAD28774.1|AF134127_1 Lhcb4.2 protein [Arabidopsis thaliana]
gi|6403491|gb|AAF07831.1|AC010871_7 putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|17473745|gb|AAL38316.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|20148559|gb|AAM10170.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|332641177|gb|AEE74698.1| chlorophyll a-b binding protein CP29.2 [Arabidopsis thaliana]
Length = 287
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G I E W G + L+DG++ Y G+ +P
Sbjct: 133 FRECELIHGRWAMLATLGAITVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 182
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP + A L++ EIK
Sbjct: 183 FSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIK 241
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 242 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287
>gi|356496185|ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ A L++ EIK
Sbjct: 185 FSITTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM LGF +QA TG+GP+ N A HLSDP ++ S ++
Sbjct: 244 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 290
>gi|268612160|pdb|2WSC|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612178|pdb|2WSE|3 Chain 3, Improved Model Of Plant Photosystem I
gi|268612196|pdb|2WSF|3 Chain 3, Improved Model Of Plant Photosystem I
Length = 276
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG + T NY+ + +
Sbjct: 103 EIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTG-FIPPAGTYNYWADSYTL--- 158
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGPF +PLG K
Sbjct: 159 --FVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGK 216
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 217 DEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLTDPVHNNILTSL 273
>gi|255639053|gb|ACU19827.1| unknown [Glycine max]
Length = 290
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E +++G E+ R LD E +L+PGG FDPLGLA DP++ A L++ EIK
Sbjct: 185 FSITTLIWIEALVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM LGF +QA VTG+GP+ N A HLSDP ++ S ++
Sbjct: 244 HARLAMVGFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSSS 290
>gi|356501755|ref|XP_003519689.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
[Glycine max]
Length = 276
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG G T NY+ + +
Sbjct: 103 EIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAG-TYNYWADSYTL--- 158
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGPF +PLG K
Sbjct: 159 --FVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGK 216
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 217 DEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNILTSL 273
>gi|356554088|ref|XP_003545381.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 1 [Glycine max]
gi|356554090|ref|XP_003545382.1| PREDICTED: chlorophyll a-b binding protein 3, chloroplastic-like
isoform 2 [Glycine max]
Length = 276
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG G T NY+ + +
Sbjct: 103 EIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAG-TYNYWADSYTL--- 158
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGPF +PLG K
Sbjct: 159 --FVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGK 216
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT +
Sbjct: 217 DEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLADPVHNNILTSL 273
>gi|346987811|gb|AEO51756.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
Length = 286
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 133 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 182
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++L+G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 183 FSISTLIWIEVLLIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIK 241
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM LGF +QA VTG+GP+ N A HLSDP ++ ++
Sbjct: 242 HARLAMVGFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTLT 285
>gi|356503628|ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ A L++ EIK
Sbjct: 185 FSITTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM LGF +QA TG+GP+ N A HLSDP ++ S ++
Sbjct: 244 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 290
>gi|160713961|gb|ABX47016.1| chloroplast chlorophyll a/b binding protein cab-PhE7 [Phyllostachys
edulis]
Length = 287
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 132 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 181
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++L+G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 182 FSMTTLIWIEVLLIGYIEFQRNAE-LDSEKRLYPGGSYFDPLGLASDPEKKERLQLAEIK 240
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM LGF +QA TG+GP+ N A HLSDP + S ++
Sbjct: 241 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSSSS 287
>gi|255585090|ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223526931|gb|EEF29136.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 244
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 12/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH RWAML G ++PEA W K + G Y G+ +P
Sbjct: 83 FKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAAIPGGQATYLGQPVP 134
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E + + E+ R D E K +PGG FDPLG +KDP +F KVKEIK
Sbjct: 135 WGTLPTILVIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPAKFHEYKVKEIK 193
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A +G + Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 194 NGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDII 237
>gi|87313167|gb|ABD37880.1| light-harvesting chlorophyll-a/b binding protein Lhca3 [Mesostigma
viride]
Length = 300
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 95/174 (54%), Gaps = 20/174 (11%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFG---ANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 79
E+IH R+AMLG AG + PE K G A G VWFKTG + +G +Y+ + +
Sbjct: 123 EVIHCRYAMLGMAGMVAPEILGKLGLIPAETG--LVWFKTGVIPSEGQ-YDYWASPLALF 179
Query: 80 LVFAVIAEIVLVGGAEYYRITNG------LDLE-------DKLHPGGP-FDPLGLAKDPD 125
+ V+ + + + YR L LE D +PGG F+ LG KD
Sbjct: 180 WIEVVLMQFAELRRWQDYRHPGSQSKQYFLGLEQFFGGSGDPSYPGGAIFNFLGYGKDEK 239
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
LK+KE+KNGRLAM A LGFF+QA TGEGP +NL HL+DPF NN+LT
Sbjct: 240 SMNDLKLKELKNGRLAMVATLGFFIQAMATGEGPFQNLTDHLADPFNNNILTTF 293
>gi|293337343|gb|ADE42967.1| type III chlorophyll a/b binding protein [Gardenia jasminoides]
Length = 274
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 100/178 (56%), Gaps = 28/178 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGA G I PE K G PE WFKTG + G T +Y+ P L
Sbjct: 101 EIINGRYAMLGAVGAIAPEILGKAGL-IPPETALPWFKTGVIPPAG-TYDYWAD--PYTL 156
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L E + ++PGGP F+PLG
Sbjct: 157 F---VFELALMGFAEHRRFQDFQKPGCLSKQYFLGFEKYFEGSGNPIYPGGPLFNPLGFG 213
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KD LK+KE+KNGRLAM A+LG+F+QA VTG GP +NL HLSDP NN+LT +
Sbjct: 214 KDEKSLKDLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLLDHLSDPVNNNILTSL 271
>gi|4689382|gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ A L++ EIK
Sbjct: 185 FSITTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM LGF +QA TG+GP+ N A HLSDP ++ S ++
Sbjct: 244 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 290
>gi|115472753|ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|3075488|gb|AAC14566.1| chlorophyll a/b-binding protein [Oryza sativa Japonica Group]
gi|34394009|dbj|BAC84033.1| chlorophyll a/b-binding protein [Oryza sativa Japonica Group]
gi|113611511|dbj|BAF21889.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|125558786|gb|EAZ04322.1| hypothetical protein OsI_26463 [Oryza sativa Indica Group]
gi|215704418|dbj|BAG93852.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737393|dbj|BAG96322.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737709|dbj|BAG96839.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764955|dbj|BAG86652.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767447|dbj|BAG99675.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 290
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM A LGF +QA TG+GP+ N A HLSDP + S ++
Sbjct: 244 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSSSS 290
>gi|159147191|gb|ABW90990.1| LHCB4 [Bambusa oldhamii]
Length = 287
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G + E W G + L+ N +Y G+ +P
Sbjct: 132 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELE-NGSSYLGQPLPF 182
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIKN 137
++ + E++L+G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK+
Sbjct: 183 SMTTLIWIEVLLIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKH 241
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
RLAM LGF +QA TG+GP+ N A HLSDP + S ++
Sbjct: 242 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSSSS 287
>gi|303324978|pdb|3LW5|1 Chain 1, Improved Model Of Plant Photosystem I
Length = 170
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 88/156 (56%), Gaps = 12/156 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
Y+ ELIH RWAML G ++PEA +G W K L G Y G +P
Sbjct: 23 YKESELIHCRWAMLAVPGILVPEALG-YGN-------WVKAQEWAALPGGQATYLGNPVP 74
Query: 78 INLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + E+ R D E K +PGG FDPLG +KDP + LKVKEIK
Sbjct: 75 WGTLPTILAIEFLAIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIK 133
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPF 171
NGRLA+ A +GF + Q+ G GP+ENLA HL+DP+
Sbjct: 134 NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPW 169
>gi|79320443|ref|NP_001031217.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
gi|332195726|gb|AEE33847.1| light-harvesting complex I chlorophyll a/b binding protein 3
[Arabidopsis thaliana]
Length = 218
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 100/178 (56%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T Y+ N +
Sbjct: 45 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYTYWADNYTL--- 100
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG K
Sbjct: 101 --FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK 158
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 159 DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLK 216
>gi|145079550|tpg|DAA05918.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Mesostigma viride]
Length = 278
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 95/174 (54%), Gaps = 20/174 (11%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFG---ANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 79
E+IH R+AMLG AG + PE K G A G VWFKTG + +G +Y+ + +
Sbjct: 101 EVIHCRYAMLGMAGMVAPEILGKLGLIPAETG--LVWFKTGVIPSEGQ-YDYWASPLALF 157
Query: 80 LVFAVIAEIVLVGGAEYYRITNG------LDLE-------DKLHPGGP-FDPLGLAKDPD 125
+ V+ + + + YR L LE D +PGG F+ LG KD
Sbjct: 158 WIEVVLMQFAELRRWQDYRHPGSQSKQYFLGLEQFFGGSGDPSYPGGAIFNFLGYGKDEK 217
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
LK+KE+KNGRLAM A LGFF+QA TGEGP +NL HL+DPF NN+LT
Sbjct: 218 SMNDLKLKELKNGRLAMVATLGFFIQAMATGEGPFQNLTDHLADPFNNNILTTF 271
>gi|13877547|gb|AAK43851.1|AF370474_1 chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
gi|23198310|gb|AAN15682.1| chlorophyll a/b-binding protein CP29 [Arabidopsis thaliana]
Length = 290
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 95/166 (57%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPL LA DP++ A L++ EIK
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLSLAADPEKTAQLQLAEIK 244
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S +
Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290
>gi|217071344|gb|ACJ84032.1| unknown [Medicago truncatula]
gi|388494662|gb|AFK35397.1| unknown [Medicago truncatula]
Length = 282
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ ELIH RWAML G ++PEA W K L G Y G +P
Sbjct: 84 FKESELIHCRWAMLAVPGILVPEALGL--------GNWVKAQEWAALPGGQATYLGNPVP 135
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
L ++ E + + E+ R D E K +PGG FDPLG +KDP +F K+KE+K
Sbjct: 136 WGTLPTILVIEFLSIAFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVK 194
Query: 137 NGRLAMFAMLGFFLQ--AYVTGEGPVENLAKHLSDPFANNL 175
NGRLA+ A +G +Q AY G GP+ENLA HL+DP+ NN+
Sbjct: 195 NGRLALLAFVGIVVQQTAY-PGTGPLENLATHLADPWHNNI 234
>gi|162458005|ref|NP_001105502.1| photosystem II subunit29 [Zea mays]
gi|2326947|emb|CAA90681.1| Chlorophyll a/b-binding protein CP29 precursor [Zea mays]
gi|195639374|gb|ACG39155.1| hypothetical protein [Zea mays]
gi|414887094|tpg|DAA63108.1| TPA: chlorophyll a/b-binding protein CP29 Precursor isoform 1 [Zea
mays]
gi|414887095|tpg|DAA63109.1| TPA: chlorophyll a/b-binding protein CP29 Precursor isoform 2 [Zea
mays]
Length = 291
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLAADPEKKERLQLAEIK 244
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM A LGF +QA TG+GP+ N A HLSDP + G++
Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGGSS 291
>gi|226358411|gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
Length = 285
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 95/164 (57%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 132 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVEGSS--YLGQPLP 181
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ A L++ EIK
Sbjct: 182 FSMTTLIWIEVLVIGFIEFQRNAE-LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIK 240
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ +
Sbjct: 241 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFT 284
>gi|20794|emb|CAA41407.1| Type III chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 286
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 98/175 (56%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG + G T NY+ P L
Sbjct: 113 EIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFQTGVIPPAG-TYNYWAD--PFTLF 169
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ L+G AE+ R+ + L LE L +PGGP F+PLG K
Sbjct: 170 ---VLEMALMGFAEHRRLQDYRNPGSMGKQYFLGLEKFLGGSGNPAYPGGPLFNPLGFGK 226
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN LT
Sbjct: 227 DEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVHNNFLT 281
>gi|297740653|emb|CBI30835.3| unnamed protein product [Vitis vinifera]
Length = 148
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 82/152 (53%), Gaps = 47/152 (30%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH RWAMLGA G + PE ++ G G EAVWFK GA
Sbjct: 32 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGA--------------------- 69
Query: 83 AVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAM 142
+ +E++L+G E YRI G PLG +VKEIKNGRLAM
Sbjct: 70 QIFSEVILMGAVEGYRIAGG--------------PLG-----------EVKEIKNGRLAM 104
Query: 143 FAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
F+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 105 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 136
>gi|225436257|ref|XP_002273201.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Vitis
vinifera]
Length = 274
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 98/179 (54%), Gaps = 28/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGA G I PE K G PE WFKTG G T NY+ P L
Sbjct: 100 EVINGRYAMLGAVGAIAPEILGKLGL-IPPETALPWFKTGVFPPAG-TYNYWAD--PYTL 155
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L LE D +PGGP F+PLG
Sbjct: 156 F---VFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFG 212
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
KD LK+KE+KNGRLAM A+LG+F Q VTG GP++NL HL+DP NN++T +
Sbjct: 213 KDEKSLKDLKLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHLADPVNNNIITSLK 271
>gi|413954857|gb|AFW87506.1| chlorophyll a-b binding protein 8 [Zea mays]
Length = 209
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 100/179 (55%), Gaps = 28/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGA G I PE F K G PE WFKTG + G T NY+ + +
Sbjct: 36 EVINGRYAMLGAVGAIAPEIFGKMGI-IPPETALPWFKTGVIPPAG-TYNYWADSYTL-- 91
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ + L+G AE+ R+ + L LE D +PGGP F+PLG
Sbjct: 92 ---FVFNMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKFLAGSGDPSYPGGPLFNPLGFG 148
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 149 KTEKEMNELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLK 207
>gi|357496383|ref|XP_003618480.1| Chlorophyll a/b binding protein [Medicago truncatula]
gi|355493495|gb|AES74698.1| Chlorophyll a/b binding protein [Medicago truncatula]
Length = 180
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 2/88 (2%)
Query: 89 VLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAML 146
+L+G E YRI +G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M
Sbjct: 81 ILMGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMF 140
Query: 147 GFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VT +GP+ENLA H++DP +N
Sbjct: 141 GFFVQAIVTEKGPLENLADHIADPVNSN 168
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 142 MFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
MF+M GFF+QA VTG+GP+ENLA H++DP NN
Sbjct: 1 MFSMFGFFVQAIVTGKGPLENLADHITDPVNNN 33
>gi|116519121|gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 98/178 (55%), Gaps = 28/178 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLG AG I PE K G PE WF+TG + G T +Y+ P L
Sbjct: 102 EIINGRYAMLGVAGAIAPEILGKLGL-IPPETALPWFQTGVIPPAG-TYSYWAD--PYTL 157
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L E D +PGGP F+PLG
Sbjct: 158 F---VLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFLGGSGDPAYPGGPIFNPLGFG 214
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KD LK+KE+KNGRLAM A+LGFF+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 215 KDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQNLLDHLADPVNNNVLTSL 272
>gi|312281797|dbj|BAJ33764.1| unnamed protein product [Thellungiella halophila]
Length = 273
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 101/177 (57%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T +Y+ N +
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYSYWADNYTL--- 155
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE + +PGGPF +PLG K
Sbjct: 156 --FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFSGSGEPAYPGGPFFNPLGFGK 213
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
+ LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 214 NEKSMKELKLKEIKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
>gi|116519125|gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
Length = 275
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 98/178 (55%), Gaps = 28/178 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLG AG I PE K G PE WF+TG + G T +Y+ P L
Sbjct: 102 EIINGRYAMLGVAGAIAPEILGKLGL-IPPETALPWFQTGVIPPAG-TYSYWAD--PYTL 157
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L E D +PGGP F+PLG
Sbjct: 158 F---VLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFLGGSGDPAYPGGPIFNPLGFG 214
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
KD LK+KE+KNGRLAM A+LGFF+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 215 KDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVGPFQNLLDHLADPVNNNVLTSL 272
>gi|255646873|gb|ACU23907.1| unknown [Glycine max]
Length = 276
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG G T NY+ + +
Sbjct: 103 EIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFRTGVFPPAG-TYNYWADSYTL--- 158
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGPF +PLG K
Sbjct: 159 --FVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGK 216
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F++A VTG GP +NL HL+DP NN+LT +
Sbjct: 217 DEKSLKDLKLKEVKNGRLAMLAILGYFVRALVTGVGPYQNLLDHLADPVHNNILTSL 273
>gi|428230864|gb|AFY99054.1| chlorophyll binding protein, partial [Cyanea asplenifolia]
Length = 197
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 100/178 (56%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE F K G A+ WF+TG + G + Y+ P L
Sbjct: 26 EVINGRFAMLGAAGAIAPEIFGKLGLIPAETALPWFQTGVIPPAG-SYTYWAD--PYTLF 82
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGPF +PLG K
Sbjct: 83 ---VFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK 139
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 140 DEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLK 197
>gi|412987928|emb|CCO19324.1| predicted protein [Bathycoccus prasinos]
Length = 415
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 88/155 (56%), Gaps = 14/155 (9%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG-KNIPINLV 81
EL+H RWAML G +PE ++ GA E +W+K G +L+G +NY G + I
Sbjct: 257 ELLHGRWAMLAVVGVCVPEILSRSGALELSEPIWWKIGEKVLEGIDVNYLGIEGFHIAGA 316
Query: 82 FAVI----AEIVLVGGAEYYRITNGLDLE--------DKLHPGG-PFDPLGLAKDPDQFA 128
+I + VL+GG EY R LE D +PGG PFDP L+ D ++
Sbjct: 317 SGIIGIAFCQAVLMGGPEYARYVGIESLEPVGVYLPGDTNYPGGGPFDPFNLSADAERDV 376
Query: 129 LLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
L+V E+K+GRLAM AMLG F QA+VT EGPV N+
Sbjct: 377 ELRVSEVKHGRLAMIAMLGVFAQAFVTREGPVANV 411
>gi|115776|sp|P14584.1|CB21_RAPSA RecName: Full=Chlorophyll a-b binding of LHCII type 1 protein;
AltName: Full=Chlorophyll a-b binding of LHCII type I
protein; Short=CAB; Short=LHCP
gi|21100|emb|CAA34640.1| chlorophyll a/b binding protein (124 AA) [Raphanus sativus]
Length = 124
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 87 EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMF 143
+++L+G E YR+ L ED L+PGG FDPL DP+ FA LKVKEIKNGRLAMF
Sbjct: 22 QVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMF 81
Query: 144 AMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 82 SMFGFFVQAIVTGKGPLENLADHLADPVNNN 112
>gi|75220641|sp|Q32904.1|CB23_PEA RecName: Full=Chlorophyll a-b binding protein 3, chloroplastic;
AltName: Full=LHCII type III CAB-3; Flags: Precursor
gi|309673|gb|AAA84545.1| light harvesting protein [Pisum sativum]
Length = 275
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG + G T NY+ N +
Sbjct: 102 EVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAG-TYNYWADNYTL--- 157
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE + +PGGPF +PLG K
Sbjct: 158 --FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGK 215
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL H++DP NN+LT +
Sbjct: 216 DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
>gi|145079397|tpg|DAA05913.1| TPA_inf: chloroplast light-harvesting complex protein CP26
precursor Lhcb5 [Acetabularia acetabulum]
Length = 245
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 81/137 (59%), Gaps = 26/137 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+A+ELIHARWAML AAG IIPE GA+ A WF+TGA +L+G TLNYF +P
Sbjct: 112 YRAFELIHARWAMLAAAGMIIPEGLAANGADI-KGATWFETGAEMLNGGTLNYFA--VPW 168
Query: 79 NLV------FAVIA-EIVLVGGAEYYRITNG----------------LDLEDKLHPGGPF 115
+V FA++A E+ L+G AE YR T D D LHPGGPF
Sbjct: 169 AIVSNPLPLFAIVAVEVGLMGAAENYRRTGTGPKGYSPGVGNFESSVFDGLDSLHPGGPF 228
Query: 116 DPLGLAKDPDQFALLKV 132
DPLGLA DP+ F LKV
Sbjct: 229 DPLGLADDPEVFQELKV 245
>gi|110736814|dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 273
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 26/177 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T Y+ N +
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYTYWADNYTL--- 155
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG K
Sbjct: 156 --FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK 213
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+ P NN+LT +
Sbjct: 214 DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLAGPVNNNVLTSL 270
>gi|255567170|ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223536119|gb|EEF37774.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 273
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 100/179 (55%), Gaps = 28/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGAAG I PE K G PE WF+TG + G T +Y+ P L
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGL-IPPETALPWFQTGVIPPAG-TYDYWAD--PYTL 155
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L LE D +PGGP F+PLG
Sbjct: 156 F---VFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFG 212
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
KD LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 213 KDEKSMKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLK 271
>gi|15081739|gb|AAK82524.1| AT5g01530/F7A7_50 [Arabidopsis thaliana]
Length = 290
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAE-LDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIK 244
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+GP A HLSDP ++ S +
Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPRNYWATHLSDPLHTTIIDTFSSS 290
>gi|116791821|gb|ABK26121.1| unknown [Picea sitchensis]
gi|224284036|gb|ACN39756.1| unknown [Picea sitchensis]
gi|224284482|gb|ACN39975.1| unknown [Picea sitchensis]
gi|224284909|gb|ACN40184.1| unknown [Picea sitchensis]
gi|224285218|gb|ACN40335.1| unknown [Picea sitchensis]
gi|224285824|gb|ACN40626.1| unknown [Picea sitchensis]
Length = 289
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 98/175 (56%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG + G T +Y+ P L
Sbjct: 115 EIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAG-TYDYWAD--PFTLF 171
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ L+G AE+ R+ + L E L +PGGP F+PLG K
Sbjct: 172 ---VLEMALMGFAEHRRLQDYRYPGSMSKQYFLGFEKYLGGSGNPSYPGGPLFNPLGFGK 228
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+KNGRLAM A++G+F+Q VTG GP +NL HL+DP NNLLT
Sbjct: 229 DEKSMKELKLKEVKNGRLAMLAIVGYFIQGLVTGVGPFQNLLDHLADPVNNNLLT 283
>gi|187609486|gb|ACD13266.1| chlorophyll a/b binding protein precursor [Phyllostachys
iridescens]
Length = 205
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 89/160 (55%), Gaps = 12/160 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIP 77
++ E+ H RWAML G ++PEA W K + G YFG +P
Sbjct: 54 FKESEVYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAAVPGGQATYFGVPVP 105
Query: 78 I-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E + + AE+ R T D E K +PGG FDPLG +KDP + K+KEI+
Sbjct: 106 WGNLPTILAIEFLAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPVKLEEYKLKEIR 164
Query: 137 NGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNL 175
NGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+
Sbjct: 165 NGRLAMLAFVGFCVQQSPYPGTGPLENLASHLADPWHNNI 204
>gi|384248209|gb|EIE21694.1| hypothetical protein COCSUDRAFT_67011 [Coccomyxa subellipsoidea
C-169]
Length = 316
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 93/162 (57%), Gaps = 13/162 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAMLGA G ++ EA W G + LDG Y G ++P
Sbjct: 160 FRETELIHGRWAMLGALGVLVAEASTGVS--------WVDAGKVELDGA--QYLGFSLPF 209
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIKN 137
++ V E +LVGGAE YR L+ + +++PGG FDPLGLA D A LK E+K+
Sbjct: 210 SISQLVWIEAILVGGAEIYR-NRELEPQARIYPGGYFDPLGLATGDDARAFKLKEAELKH 268
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
GRLAM A LGF +QA TG+G + +LAK S FA L+ I
Sbjct: 269 GRLAMIAFLGFGVQALATGQGALGSLAKFASS-FAPELVEDI 309
>gi|219362417|ref|NP_001136606.1| uncharacterized protein LOC100216729 [Zea mays]
gi|194696340|gb|ACF82254.1| unknown [Zea mays]
Length = 291
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
+ + E++++G E+ R LD E +L+PGG FDPL LA DP++ L++ EIK
Sbjct: 186 FTISTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLALAADPEKKERLQLAEIK 244
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM A LGF +QA TG+GP+ N A HLSDP + G++
Sbjct: 245 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGGSS 291
>gi|242050544|ref|XP_002463016.1| hypothetical protein SORBIDRAFT_02g036260 [Sorghum bicolor]
gi|241926393|gb|EER99537.1| hypothetical protein SORBIDRAFT_02g036260 [Sorghum bicolor]
Length = 288
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 133 FRECELIHGRWAMLATLGALSVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 182
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 183 FSISTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLAADPEKKERLQLAEIK 241
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+ RLAM A LGF +QA TG+GP+ N A HLSDP + ++
Sbjct: 242 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGASS 288
>gi|225690794|gb|ACO06083.1| chlorophyll a-b binding protein [Triticum aestivum]
Length = 252
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG--ALLLDGNTLNYFGKNI 76
++ E+ H RWAML G ++PEA W K A L DG Y G +
Sbjct: 85 FKESEIYHCRWAMLCVPGVLVPEALGL--------GNWVKAQEWAALPDGQA-TYLGNPV 135
Query: 77 PI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEI 135
P NL + E + + AE R T D E K +PGG FDPLG +KDP +F LK+KEI
Sbjct: 136 PWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEI 194
Query: 136 KNGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLT 177
KNGRLAM A +GF + Q+ G GP+EN HL+DP+ N T
Sbjct: 195 KNGRLAMLAFVGFCVQQSAYPGTGPLENPGTHLADPWHNTSAT 237
>gi|424512849|emb|CCO66433.1| predicted protein [Bathycoccus prasinos]
Length = 286
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 17/168 (10%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH RWAMLG AG PE F + VWFK G + G + +++ + V
Sbjct: 112 EVIHGRWAMLGVAGATAPETMKGFIPDS-TAVVWFKNGIIPAQG-SYDFWAPPTALFWVM 169
Query: 83 AVIAEIVLVGG-AEY----YRITNGL-DLEDKL-------HPGGPFDPLGLAKDPDQFAL 129
+ V + EY +R L LE + +PGG F+P+G+ K+
Sbjct: 170 VCMMNFVEINRLTEYANPGFRTKQSLAGLEKGMGGTGNPAYPGGSFNPMGMGKN--DMDA 227
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
+KVKEIKNGRLAM A G +QA +TGEGPV+NL H++DPFA+NLLT
Sbjct: 228 MKVKEIKNGRLAMMAFFGIMVQAIITGEGPVKNLTDHVTDPFAHNLLT 275
>gi|224131950|ref|XP_002321218.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
gi|118485656|gb|ABK94678.1| unknown [Populus trichocarpa]
gi|222861991|gb|EEE99533.1| light-harvesting complex I protein Lhca3 [Populus trichocarpa]
Length = 274
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 99/179 (55%), Gaps = 28/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGA G I PE K G PE WF+TG + G T +Y+ P L
Sbjct: 101 EIINGRYAMLGAVGAIAPEILGKAGL-IPPETALPWFRTGVIPPAG-TYSYWAD--PYTL 156
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLA 121
+ E+ L+G AE+ R+ + L E L +PGGP F+PLG
Sbjct: 157 F---VFEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFG 213
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
KD LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 214 KDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNILTSLK 272
>gi|427338317|gb|AFY52157.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338319|gb|AFY52158.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338321|gb|AFY52159.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338323|gb|AFY52160.1| chlorophyll binding protein, partial [Clermontia kohalae]
gi|427338325|gb|AFY52161.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338327|gb|AFY52162.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338329|gb|AFY52163.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338331|gb|AFY52164.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338333|gb|AFY52165.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338335|gb|AFY52166.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338337|gb|AFY52167.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338339|gb|AFY52168.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338341|gb|AFY52169.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338343|gb|AFY52170.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338345|gb|AFY52171.1| chlorophyll binding protein, partial [Clermontia grandiflora subsp.
grandiflora]
gi|427338347|gb|AFY52172.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338349|gb|AFY52173.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338351|gb|AFY52174.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338353|gb|AFY52175.1| chlorophyll binding protein, partial [Clermontia micrantha]
gi|427338355|gb|AFY52176.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338357|gb|AFY52177.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338359|gb|AFY52178.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338361|gb|AFY52179.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338363|gb|AFY52180.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338365|gb|AFY52181.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338367|gb|AFY52182.1| chlorophyll binding protein, partial [Clermontia tuberculata]
gi|427338369|gb|AFY52183.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338371|gb|AFY52184.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338373|gb|AFY52185.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338375|gb|AFY52186.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
gi|427338383|gb|AFY52190.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338385|gb|AFY52191.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338387|gb|AFY52192.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338389|gb|AFY52193.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338391|gb|AFY52194.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338393|gb|AFY52195.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338395|gb|AFY52196.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338397|gb|AFY52197.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338399|gb|AFY52198.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338401|gb|AFY52199.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338403|gb|AFY52200.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338405|gb|AFY52201.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338407|gb|AFY52202.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338409|gb|AFY52203.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338411|gb|AFY52204.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338413|gb|AFY52205.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338415|gb|AFY52206.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338417|gb|AFY52207.1| chlorophyll binding protein, partial [Clermontia clermontioides
subsp. clermontioides]
gi|427338419|gb|AFY52208.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338421|gb|AFY52209.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338423|gb|AFY52210.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338425|gb|AFY52211.1| chlorophyll binding protein, partial [Clermontia montis-loa]
gi|427338427|gb|AFY52212.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338429|gb|AFY52213.1| chlorophyll binding protein, partial [Clermontia calophylla]
gi|427338431|gb|AFY52214.1| chlorophyll binding protein, partial [Clermontia waimeae]
gi|427338433|gb|AFY52215.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338435|gb|AFY52216.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338437|gb|AFY52217.1| chlorophyll binding protein, partial [Clermontia parviflora]
gi|427338439|gb|AFY52218.1| chlorophyll binding protein, partial [Clermontia oblongifolia
subsp. oblongifolia]
gi|427338441|gb|AFY52219.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|427338443|gb|AFY52220.1| chlorophyll binding protein, partial [Clermontia peleana]
gi|427338445|gb|AFY52221.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338447|gb|AFY52222.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338449|gb|AFY52223.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338451|gb|AFY52224.1| chlorophyll binding protein, partial [Clermontia singuliflora]
gi|427338453|gb|AFY52225.1| chlorophyll binding protein, partial [Clermontia drepanomorpha]
gi|427338455|gb|AFY52226.1| chlorophyll binding protein, partial [Clermontia lindseyana]
gi|428230858|gb|AFY99051.1| chlorophyll binding protein, partial [Clermontia kakeana]
gi|428230860|gb|AFY99052.1| chlorophyll binding protein, partial [Clermontia arborescens subsp.
waihiae]
Length = 197
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 99/178 (55%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R+AMLGA G I PE F K G A+ WF+TG + G + Y+ P L
Sbjct: 26 EVFNGRFAMLGAVGAIAPEIFGKLGLIPAETALPWFQTGVIPPAG-SYTYWAD--PYTLF 82
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE D +PGGPF +PLG K
Sbjct: 83 ---VFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFAGSGDPAYPGGPFFNPLGFGK 139
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 140 DEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLK 197
>gi|357122377|ref|XP_003562892.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Brachypodium distachyon]
Length = 288
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 13/163 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 135 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 184
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
+ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 185 FTITTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGSYFDPLGLAADPEKKERLQLAEIK 243
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
+ RLAM LGF +QA TG+GP+ N A HLSDP + +
Sbjct: 244 HARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTL 286
>gi|159486759|ref|XP_001701405.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
gi|158271707|gb|EDO97521.1| light-harvesting chlorophyll-a/b protein of photosystem I, type III
[Chlamydomonas reinhardtii]
Length = 298
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 99/185 (53%), Gaps = 29/185 (15%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV---WFKTGALLLDGNTLNYFGKNI 76
Q E+IHARWAMLGAAG I PE A P+A WF++G + G+ Y+
Sbjct: 88 QYSEVIHARWAMLGAAGCIAPEVLG--AAGLIPDATNIKWFESGVIPPAGSYNGYWAD-- 143
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DP 117
P + F EIV + AE R+ + L LE D +PGGPF +
Sbjct: 144 PYTIFFV---EIVAMQFAELRRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYPGGPFFNL 200
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
L K LK+KEIKNGRLAM AMLG+ QA +TG+GP +NL +HL+DP NN+LT
Sbjct: 201 FNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGKGPFQNLVEHLADPVNNNILT 260
Query: 178 VISGN 182
+G
Sbjct: 261 NFAGR 265
>gi|427338377|gb|AFY52187.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338379|gb|AFY52188.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|427338381|gb|AFY52189.1| chlorophyll binding protein, partial [Clermontia fauriei]
gi|428230862|gb|AFY99053.1| chlorophyll binding protein, partial [Clermontia fauriei]
Length = 197
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 99/178 (55%), Gaps = 26/178 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R+AMLGA G I PE F K G A+ WF+TG + G + Y+ P L
Sbjct: 26 EVFNGRFAMLGAVGAIAPEIFGKLGLIPAETALPWFQTGVIPPAG-SYTYWAD--PYTLF 82
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE D +PGGPF +PLG K
Sbjct: 83 ---VFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFAGSGDPAYPGGPFFNPLGFGK 139
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D LK+KEIKNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 140 DETSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLK 197
>gi|302828616|ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|300268690|gb|EFJ52870.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
Length = 243
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
YQ EL+HAR AM AG +IP K GA PE W+ G + ++ + P
Sbjct: 69 YQQAELVHARTAMTAVAGILIPGLLTKAGALNVPE--WYDAGKVAIESSF-------APF 119
Query: 79 NLVFAVIAEIVLVGGAEYYRITN----GLDLE---------------DKLHPGGPFDPLG 119
+ AV ++ L G E R + G E D +PGG FDPLG
Sbjct: 120 GALLAV--QLFLTGFVEAKRWQDFKKPGSQAEKGSFLGFETAFAGTGDNGYPGGIFDPLG 177
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
L+KD D+ A K+KEIKNGRLAM A LGF Q + TG+GP++NLA HL+DP+ N
Sbjct: 178 LSKDADKLADWKLKEIKNGRLAMVAFLGFTAQKFATGKGPIDNLAAHLADPWHVN 232
>gi|110377766|gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotiana tabacum]
Length = 285
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 12/160 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L++G++ Y G+ +P
Sbjct: 129 FRECELIHGRWAMLATLGALTVEWLTGI--------TWQDAGKVELVEGSS--YLGQPLP 178
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G ++ LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 179 FSITTLIWIEVLVIGYIVEFQRNAELDPEKRLYPGGSFFDPLGLAADPEKKATLQLAEIK 238
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
+ RLAM A LGF +QA TG+GP+ N A HLSDP +
Sbjct: 239 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIF 278
>gi|118489937|gb|ABK96765.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 274
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 98/179 (54%), Gaps = 28/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINL 80
E+I+ R+AMLGA G I PE K G PE WF+TG + G T +Y+ P L
Sbjct: 101 EIINGRYAMLGAVGAIAPEILGKAGL-IPPETALPWFRTGVIPPAG-TYSYWAD--PYTL 156
Query: 81 VFAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLA 121
+ E+ L+G AE+ R + L E L +PGGP F+PLG
Sbjct: 157 F---VFEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFG 213
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
KD LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 214 KDEKSLKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNILTSLK 272
>gi|339716018|gb|AEJ88256.1| putative light harvesting chlorophyll a/b-binding protein [Wolffia
australiana]
Length = 92
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/80 (66%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
Query: 97 YRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYV 154
YR+ G ++ D L+PGG FDPL LA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA V
Sbjct: 1 YRVAGGPLGEVVDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV 60
Query: 155 TGEGPVENLAKHLSDPFANN 174
TG+GP+ENLA HL+DP NN
Sbjct: 61 TGKGPLENLADHLADPVNNN 80
>gi|4139222|gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
reinhardtii]
gi|40714519|dbj|BAD06923.1| light-harvesting chlorophyll-a/b protein of photosystem I
[Chlamydomonas reinhardtii]
Length = 228
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+S + S + E+IH RWAMLG AG + E W+ ++G
Sbjct: 62 LSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELLGY--------GNWYDAPLWAVNG 113
Query: 67 NTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQ 126
+FG +P +L + E V + AE R D ++PGG FDPLG AKD +
Sbjct: 114 GKATWFGIEVPFDLNALLAFEFVAMAAAEGQRG----DAGGVVYPGGAFDPLGFAKDSSK 169
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KEIKNGRLAM A LGF Q TG+GP+ L +HL++P+ N T
Sbjct: 170 SGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANPWGANFAT 220
>gi|28630973|gb|AAO45885.1| chlorophyll a/b-binding protein precursor [Citrus limon]
Length = 216
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK GA + L+Y G I
Sbjct: 97 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQS 155
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+ A+ A ++VL+G E YRI G ++ D L+PGG FDPLGLA DP FA LKVKEIKN
Sbjct: 156 ILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPKAFAELKVKEIKN 215
Query: 138 G 138
G
Sbjct: 216 G 216
>gi|21554335|gb|AAM63442.1| PSI type III chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
Length = 273
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 95/176 (53%), Gaps = 24/176 (13%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+I+ R+AMLGAAG I PE K G A+ ++ T Y+ N +
Sbjct: 100 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPXXQTGVIPPAGTYTYWADNYTL---- 155
Query: 83 AVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAKD 123
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG KD
Sbjct: 156 -FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKD 214
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP NN+LT +
Sbjct: 215 EKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSL 270
>gi|295798043|emb|CBL86548.1| chlorophyll a/b binding protein [Olea europaea]
Length = 179
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RW ML G + E W G + L++G +Y G+ +P
Sbjct: 24 FRECELIHGRWGMLATLGALTVEWLTG--------VTWQDAGKVELVEGA--SYLGQPLP 73
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R +D E + +PGG F DPLGLA DP++ A L++ EIK
Sbjct: 74 FSITTLIWIEVLVIGYIEFQRNAE-VDPEKRXYPGGSFFDPLGLAADPEKKATLQLAEIK 132
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
+ RLAM A LGF +QA TG+GP+ N A HLSDP +L
Sbjct: 133 HARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIL 172
>gi|87313223|gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
[Chlamydomonas incerta]
Length = 192
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+S S + E+IH RWAMLG AG + E W+ ++G
Sbjct: 26 LSLGKDPASLKRFTESEVIHGRWAMLGVAGSLAVELLGY--------GNWYDAPLWAVNG 77
Query: 67 NTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQ 126
+FG ++P +L + E V + AE R D ++PGG FDPLG AKD +
Sbjct: 78 GKATWFGIDVPFDLNTLLAFEFVAMAAAEGQRG----DAGGVVYPGGAFDPLGFAKDASK 133
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+KNGRLAM A LGF Q TG+GP+ L +HLS+P+ N T
Sbjct: 134 SGELKLKEVKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLSNPWGANFAT 184
>gi|18125|emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
Length = 224
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+S + S + E+IH RWAMLG AG + E W+ ++G
Sbjct: 58 LSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELLGY--------GNWYDAPLWAVNG 109
Query: 67 NTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQ 126
+FG +P +L + E V + AE R D ++PGG FDPLG AKD +
Sbjct: 110 GKATWFGIEVPFDLNALLAFEFVAMAAAEGQRG----DAGGVVYPGGAFDPLGFAKDSSK 165
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KEIKNGRLAM A LGF Q TG+GP+ L +HL++P+ N T
Sbjct: 166 SGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANPWGANFAT 216
>gi|302854499|ref|XP_002958757.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
gi|300255932|gb|EFJ40213.1| hypothetical protein VOLCADRAFT_108301 [Volvox carteri f.
nagariensis]
Length = 112
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 94 AEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQ 151
A YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+Q
Sbjct: 18 AHGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQ 77
Query: 152 AYVTGEGPVENLAKHLSDPFANN 174
A VTG+GP+ENL HL++P NN
Sbjct: 78 AIVTGKGPIENLNDHLANPAVNN 100
>gi|302854487|ref|XP_002958751.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|302854497|ref|XP_002958756.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
gi|300255926|gb|EFJ40207.1| hypothetical protein VOLCADRAFT_84624 [Volvox carteri f.
nagariensis]
gi|300255931|gb|EFJ40212.1| hypothetical protein VOLCADRAFT_78096 [Volvox carteri f.
nagariensis]
Length = 98
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 2/86 (2%)
Query: 91 VGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 148
+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GF
Sbjct: 1 MGLVEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGF 60
Query: 149 FLQAYVTGEGPVENLAKHLSDPFANN 174
F+QA VTG+GP+ENL HL++P NN
Sbjct: 61 FVQAIVTGKGPIENLNDHLANPAVNN 86
>gi|40714511|dbj|BAD06919.1| light-harvesting chlorophyll-a/b protein of photosystem I (Type
III) [Chlamydomonas reinhardtii]
Length = 267
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 97/180 (53%), Gaps = 29/180 (16%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV---WFKTGALLLDGNTLNYFGKNI 76
Q E+IHARWAMLGAAG I PE A P+A WF++G + G+ Y+
Sbjct: 88 QYSEVIHARWAMLGAAGCIAPEVLG--AAGLIPDATNIKWFESGVIPPAGSYNGYWAD-- 143
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DP 117
P + F EIV + AE R+ + L LE D +PGGPF +
Sbjct: 144 PYTIFFV---EIVAMQFAELRRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYPGGPFFNL 200
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
L K LK+KEIKNGRLAM AMLG+ QA +TG+GP +NL +HL+DP NN+LT
Sbjct: 201 FNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVMTGKGPFQNLVEHLADPVNNNILT 260
>gi|351066141|gb|AEQ39045.1| putative light-harvesting complex II chlorophyll-a/b binding
protein [Wolffia arrhiza]
Length = 84
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 104 DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
++ D L+PGG FDPL LA+DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL
Sbjct: 2 EVTDPLYPGGSFDPLNLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 61
Query: 164 AKHLSDPFANN 174
A HL+DP NN
Sbjct: 62 ADHLADPVNNN 72
>gi|375152320|gb|AFA36618.1| chlorophyll a/b binding protein, partial [Lolium perenne]
Length = 91
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
Query: 98 RITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVT 155
RI G ++ D L+PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VT
Sbjct: 1 RIAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 60
Query: 156 GEGPVENLAKHLSDPFANN 174
G+GP+ENLA HL+DP NN
Sbjct: 61 GKGPLENLADHLADPVNNN 79
>gi|398313943|emb|CCI55398.1| PSI antenna protein Lhca3 [Marchantia polymorpha]
Length = 279
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 97/175 (55%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE F K G A+ WF+TG + G +Y+ P L
Sbjct: 106 EIINGRFAMLGAAGAIAPEIFGKIGLIPQETAIPWFQTGVIPPLGQ-YSYWAD--PYTLF 162
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLAK 122
+ E+ L+G AE+ R + L E D +PGGP F+ LG +
Sbjct: 163 ---VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKVLGGSGDPAYPGGPLFNFLGFGR 219
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LKVKE+KNGRLAM A+LG+F+QA TG GP +NL HLSDP NN+LT
Sbjct: 220 DEKSMKDLKVKEVKNGRLAMLAVLGYFIQAIFTGVGPFQNLLDHLSDPANNNVLT 274
>gi|445116|prf||1908421A light-harvesting complex IIa protein
Length = 286
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + E W G + L+DG++ Y G+ +P
Sbjct: 132 FRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVDGSS--YLGQPLP 181
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
+ + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK
Sbjct: 182 FTITTLIWIEVLVIGYIEFQRNAE-LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIK 240
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ RLAM A LGF +QA TG+G + N A HLSDP + +
Sbjct: 241 HARLAMVAFLGFAVQAAATGKGRLNNWATHLSDPLHTTIFDTFGSS 286
>gi|87313215|gb|ABD37904.1| light-harvesting chlorophyll-a/b binding protein Lhca2
[Chlamydomonas incerta]
Length = 254
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 97/180 (53%), Gaps = 29/180 (16%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV---WFKTGALLLDGNTLNYFGKNI 76
Q E+IHARWAMLGAAG I PE A P+A WF++G + G+ Y+
Sbjct: 75 QYSEVIHARWAMLGAAGCIAPEVLG--AAGLIPDATNIKWFESGVIPPAGSYDGYWAD-- 130
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DP 117
P + F EIV + AE R+ + L LE D +PGGPF +
Sbjct: 131 PYTIFFV---EIVAMQFAELRRLQDFRYPGSMGQQYFLGLEAIFKGSGDAAYPGGPFFNL 187
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
L K LK+KEIKNGRLAM AMLG+ QA +TG+GP +NL +HL+DP NN+LT
Sbjct: 188 FNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQAVLTGKGPFQNLVEHLADPVNNNILT 247
>gi|209778997|gb|ACI87809.1| putative chloroplast chlorophyll a/b-binding protein [Cupressus
sempervirens]
Length = 85
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 57/68 (83%)
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
D L+PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL H
Sbjct: 6 DPLYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDH 65
Query: 167 LSDPFANN 174
L+DP NN
Sbjct: 66 LADPSTNN 73
>gi|115448873|ref|NP_001048216.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|46805727|dbj|BAD17114.1| putative light-harvesting chlorophyll-a/b protein of photosystem I
[Oryza sativa Japonica Group]
gi|113537747|dbj|BAF10130.1| Os02g0764500 [Oryza sativa Japonica Group]
gi|215694704|dbj|BAG89895.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623725|gb|EEE57857.1| hypothetical protein OsJ_08493 [Oryza sativa Japonica Group]
Length = 261
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 95/184 (51%), Gaps = 34/184 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G N P VWF+ GA D NT F
Sbjct: 92 YVQAELVHCRFAMAGVAGILATDLIRVSGINNLP--VWFEAGATKFDFANTTALF----- 144
Query: 78 INLVFAVIAEIVLVGGAEYYR----ITNGLDLEDKL--------------HPGGP-FDPL 118
+++L+G AE R I G E+ +PGGP F+PL
Sbjct: 145 -------FVQLLLMGFAETKRYMDFINPGSQAEEGTFLGIEAALAGSQPGYPGGPLFNPL 197
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLAKD + K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++
Sbjct: 198 GLAKDIENADEAKLKEIKNGRLAMVAMLGFIVQASVTHVGPIDNLLTHLSDPFNKNIIHT 257
Query: 179 ISGN 182
+S +
Sbjct: 258 LSSS 261
>gi|914284|gb|AAB34068.1| light-harvesting complex b type 3, Lhcb3 [Ginkgo biloba, 3-4 week
old seedlings, Peptide Partial, 132 aa]
Length = 132
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
Query: 81 VFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIK 136
+ AV+ +++L+G E +RI G+ L+PGG FDPLGLA DPD FA LKVKE+K
Sbjct: 23 ILAVLGFQVILMGLVEGFRINGLPGVGEGGDLYPGGQYFDPLGLADDPDTFAELKVKEVK 82
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
NGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN
Sbjct: 83 NGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 120
>gi|302854202|ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300256072|gb|EFJ40348.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 228
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
+ E+IH RWAMLG AG + E W+ + G +FG +P
Sbjct: 74 FTESEVIHGRWAMLGVAGALAVELLGY--------GNWYDAPLWAVTGGKATWFGIEVPF 125
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
+L + E V + AE R D ++PGG FDPLG AKD + LK+KEIKNG
Sbjct: 126 DLNTLLAFEFVAMAAAEGQRN----DAGGVIYPGGAFDPLGFAKDSSKAGELKLKEIKNG 181
Query: 139 RLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
RLAM A LGF Q TG+GP+ L +HL++P+ N T
Sbjct: 182 RLAMVAFLGFIAQHAATGKGPLAALGEHLANPWGANFAT 220
>gi|168041643|ref|XP_001773300.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675342|gb|EDQ61838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIHARWAML G +IPEA N W T G Y G +P
Sbjct: 39 FKESELIHARWAMLAIPGVLIPEALGY--GNWVSAQKWAAT-----PGGQATYLGNPVPW 91
Query: 79 -NLVFAVIAEIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E + + E R NG D E + +PGGPFDPLG +K + LK+KEIK
Sbjct: 92 GNLPIILAVEFIAIAFVESQR--NGESDPEKRKYPGGPFDPLGFSKGAN-LEELKLKEIK 148
Query: 137 NGRLAMFAMLGFFLQAYV-TGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A LGF +QA G GP+ENL HL+DP+ N + V+
Sbjct: 149 NGRLALVAFLGFVVQAVAYPGTGPLENLKTHLADPWHNTIAHVL 192
>gi|218191630|gb|EEC74057.1| hypothetical protein OsI_09055 [Oryza sativa Indica Group]
Length = 261
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 95/184 (51%), Gaps = 34/184 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G N P VWF+ GA D NT F
Sbjct: 92 YVQAELVHCRFAMAGVAGILATDFIRVSGINNLP--VWFEAGATKFDFANTTALF----- 144
Query: 78 INLVFAVIAEIVLVGGAEYYR----ITNGLDLEDKL--------------HPGGP-FDPL 118
+++L+G AE R I G E+ +PGGP F+PL
Sbjct: 145 -------FVQLLLMGFAETKRYMDFINPGSQAEEGTFLGIEAALAGSQPGYPGGPLFNPL 197
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLAKD + K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++
Sbjct: 198 GLAKDIENADEAKLKEIKNGRLAMVAMLGFIVQASVTHVGPIDNLLTHLSDPFNKNIIHT 257
Query: 179 ISGN 182
+S +
Sbjct: 258 LSSS 261
>gi|21594018|gb|AAM65936.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
Length = 276
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 137 FRECELIHGRWAMLGTLGAIAVEALTGI--------AWQDAGKVELVEGSS--YLGQPLP 186
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E+++VG E+ R + LD E +++PGG FDPLGLA DP++ LK+ EIK+
Sbjct: 187 FSLTTLIWIEVLVVGYIEFQRNSE-LDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKH 245
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F LQA TG+GPV LA
Sbjct: 246 SRLAMVAFLIFALQAAFTGKGPVSFLA 272
>gi|15225630|ref|NP_181539.1| chlorophyll a-b binding protein CP29.3 [Arabidopsis thaliana]
gi|38503231|sp|Q9S7W1.1|CB4C_ARATH RecName: Full=Chlorophyll a-b binding protein CP29.3,
chloroplastic; AltName: Full=LHCB4.3; AltName:
Full=LHCII protein 4.3; Flags: Precursor
gi|4741956|gb|AAD28775.1|AF134128_1 Lhcb4:3 protein [Arabidopsis thaliana]
gi|17979325|gb|AAL49888.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|20465761|gb|AAM20369.1| putative chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|330254684|gb|AEC09778.1| chlorophyll a-b binding protein CP29.3 [Arabidopsis thaliana]
Length = 276
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 137 FRECELIHGRWAMLGTLGAIAVEALTGI--------AWQDAGKVELVEGSS--YLGQPLP 186
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E+++VG E+ R + LD E +++PGG FDPLGLA DP++ LK+ EIK+
Sbjct: 187 FSLTTLIWIEVLVVGYIEFQRNSE-LDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKH 245
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F LQA TG+GPV LA
Sbjct: 246 SRLAMVAFLIFALQAAFTGKGPVSFLA 272
>gi|32307468|gb|AAP79139.1| chlorophyll a/b-binding protein CP29 [Bigelowiella natans]
Length = 291
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G I+ E W + G + LDG Y ++P
Sbjct: 153 FRECELIHGRWAMLATLGAIVAELSTG--------VPWDQAGKVELDG--ARYLNFDLPF 202
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLA-KDPDQFALLKVKEIKN 137
+ + E++LVGGAE YR T DL+ +L+PGG FDPLG K +Q L+ EIK+
Sbjct: 203 TVSQLTLLEVLLVGGAEIYRNTE-TDLDKRLYPGGTFDPLGFTTKSDEQTMRLREAEIKH 261
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAM A G +QA+ TGEG +ENL+
Sbjct: 262 GRLAMVAAFGCGVQAFTTGEGLIENLS 288
>gi|168041250|ref|XP_001773105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675652|gb|EDQ62145.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIHARWAML G +IPEA N W T G Y G +P
Sbjct: 82 FKESELIHARWAMLAVPGVLIPEALGY--GNWVSAQKWAAT-----PGGQATYLGNPVPW 134
Query: 79 -NLVFAVIAEIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
NL + E + + AE R NG D E + +PGG FDPLG +K + LK+KEIK
Sbjct: 135 GNLPVILAIEFLAIAFAESQR--NGEPDPEKRKYPGGAFDPLGFSKGAN-LEELKLKEIK 191
Query: 137 NGRLAMFAMLGFFLQAYV-TGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A LGF +QA G GP+ENL HL+DP+ N + VI
Sbjct: 192 NGRLALVAFLGFAVQAIAYPGTGPLENLKTHLADPWHNTIAHVI 235
>gi|118486699|gb|ABK95186.1| unknown [Populus trichocarpa]
Length = 142
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 55 VWFKTGAL-LLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGG 113
W G + L++G++ Y G+ +P ++ ++ E++++G E+ R LD E +L+PGG
Sbjct: 17 TWQDAGKVELVEGSS--YLGQPLPFSITTLILIEVLVIGYIEFQRNAE-LDPEKRLYPGG 73
Query: 114 PF-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFA 172
F DPLGLA DP++ A L++ EIK+ RLAM A LGF +QA+VTG+GP+ N A HLSDP
Sbjct: 74 NFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAWVTGKGPLNNWATHLSDPLH 133
Query: 173 NNLLTVIS 180
++ +S
Sbjct: 134 TTIIDTLS 141
>gi|302839735|ref|XP_002951424.1| chlorophyll a/b-binding protein of photosystem II [Volvox carteri
f. nagariensis]
gi|300263399|gb|EFJ47600.1| chlorophyll a/b-binding protein of photosystem II [Volvox carteri
f. nagariensis]
Length = 317
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G ++ EA W G + LDG + Y G ++P
Sbjct: 170 FRECELIHGRWAMLACLGCLVAEATTGVS--------WVDAGKVELDGAS--YAGLSLPF 219
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIKN 137
++ + E++LVGGAE YR T + E + +PGG FDPL LA + ++ A LK EIK+
Sbjct: 220 SITQLIWIEVILVGGAEIYRNTE-TNPEKRCYPGGFFDPLKLASEDEERAFRLKTAEIKH 278
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAK 165
RLAM + G+ +QA+ TGEG + +LAK
Sbjct: 279 ARLAMVSFFGYSVQAFTTGEGALGSLAK 306
>gi|297823921|ref|XP_002879843.1| LHCB4.3 [Arabidopsis lyrata subsp. lyrata]
gi|297325682|gb|EFH56102.1| LHCB4.3 [Arabidopsis lyrata subsp. lyrata]
Length = 276
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 137 FRECELIHGRWAMLGTLGAIAVEALTGI--------AWQDAGKVELVEGSS--YLGQPLP 186
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E+++VG E+ R + LD E +++PGG FDPLGLA DP++ LK+ EIK+
Sbjct: 187 FSLTTLIWIEVLVVGYIEFQRNSE-LDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKH 245
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F LQA TG+GP+ LA
Sbjct: 246 SRLAMVAFLIFALQAAFTGKGPISFLA 272
>gi|1262849|gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding polypeptide,
partial [Pinus palustris]
Length = 95
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 92 GGAEYYRITNGLDLEDKLH-PGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL 150
GG Y ++G D+ H P G FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+
Sbjct: 2 GGLPYCGRSSGRG--DRPHLPRGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 59
Query: 151 QAYVTGEGPVENLAKHLSDPFANN 174
QA VTG+GP+ENLA HL+DP NN
Sbjct: 60 QAIVTGKGPIENLADHLADPVNNN 83
>gi|225580693|gb|ACN94454.1| photosystem I light-harvesting cholrophyll-a/b protein 3
[Dunaliella salina]
Length = 286
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 96/183 (52%), Gaps = 25/183 (13%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPI 78
Q E+IHARWAMLGAAG I PE K G AV WF+TG + G +++ P
Sbjct: 106 QYSEVIHARWAMLGAAGCIAPEILGKAGVIPAETAVDWFRTGVIPPAGVYKDFWAD--PF 163
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-------------GLD-----LEDKLHPGGPF-DPLG 119
L F E+V + AE R+ + GL+ ++ +PGGPF +
Sbjct: 164 TLFFI---EVVAIQFAELKRLQDYKNPGSQSRQYFLGLEGLFKGSDNPAYPGGPFFNFAN 220
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
K + LK+ EIKNGRLAM AM G+ QA +TG+GP +NL HL+DP NL+T +
Sbjct: 221 FGKTEAEMKKLKLNEIKNGRLAMLAMFGYGAQAVITGDGPFDNLLAHLADPTGANLITNL 280
Query: 180 SGN 182
G
Sbjct: 281 GGK 283
>gi|193875788|gb|ACF24530.1| chlorophyll a/b binding protein CP29 [Gymnochlora stellata]
Length = 290
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G ++ E W + G + LDG Y N+P
Sbjct: 152 FRECELIHGRWAMLATLGAVVAELSTG--------VPWDQAGKVELDG--ARYLNFNLPF 201
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLA-KDPDQFALLKVKEIKN 137
+ + E++LVGGAE YR T DL+ +L+PGG FDPLGL K +Q L+ EIK+
Sbjct: 202 TVSQLTLLEVLLVGGAEIYRNTE-TDLDKRLYPGGYFDPLGLTTKSAEQTQNLREAEIKH 260
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
GRLAM A G +QA+ TGEG ++NL+
Sbjct: 261 GRLAMVAAFGCGVQAFTTGEGLLDNLS 287
>gi|145079082|tpg|DAA05897.1| TPA_inf: chloroplast light-harvesting protein CP29 precursor Lhcb4
[Acetabularia acetabulum]
Length = 275
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 87/158 (55%), Gaps = 17/158 (10%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G I+ E W + G + LDG YF N+P
Sbjct: 133 FRECELIHGRWAMLACLGCIVAEGATG--------VSWVEAGKVELDG--AQYFNFNLPF 182
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIKN 137
++ V E +LVGGAE YR T LD + +PGG FDPL LA D + + LK EIK+
Sbjct: 183 SITQLVWIEAILVGGAEIYRNTE-LDSVKRCYPGGIFDPLKLASDDSERSFKLKEAEIKH 241
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
RLAM A LG+ +QA VTG+G + +LA FA NL
Sbjct: 242 ARLAMIAFLGYSIQAGVTGQGALGSLAL-----FAKNL 274
>gi|449527137|ref|XP_004170569.1| PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like,
partial [Cucumis sativus]
Length = 79
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 57/66 (86%)
Query: 109 LHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
++PGG FDPLGLA DP+ FA LKVKE+KNGRLAMF+M GFF+QA VTG+GP+ENLA HL+
Sbjct: 2 IYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLT 61
Query: 169 DPFANN 174
DP NN
Sbjct: 62 DPVNNN 67
>gi|7271947|gb|AAF44703.1|AF241525_1 chlorophyll a/b-binding protein type III [Alonsoa meridionalis]
Length = 193
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 94/171 (54%), Gaps = 26/171 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGA G I PE K G A+ WF+TG + G T NY+ +
Sbjct: 29 EIINGRFAMLGAVGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYNYWADGYTL--- 84
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DPLGLAK 122
+ E+ L+G AE+ R + L LE D +PGGPF +PLG K
Sbjct: 85 --FVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGK 142
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+DP+ N
Sbjct: 143 DEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPFQNLLDHLADPWHN 193
>gi|168057356|ref|XP_001780681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667846|gb|EDQ54465.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 208
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 93/182 (51%), Gaps = 34/182 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H+R+AM G AG + + G P VWF+ GA D +T F
Sbjct: 40 YVQAELVHSRFAMAGVAGILFTDLLRASGRTDIP--VWFEAGATKFDFADTTTLF----- 92
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLD-----LEDKL-------------HPGGP-FDPL 118
+ +++L+G E R + + ED +PGGP F+PL
Sbjct: 93 -------VVQLILMGFVETKRWMDIVKPGSQAAEDSFFGFEAAFEGLETGYPGGPLFNPL 145
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
G A DP + L+ KEIKNGRLAM AM+GF +QAYVT GP+ENL HLSDP N ++
Sbjct: 146 GFANDPTKPQPLRWKEIKNGRLAMVAMVGFMVQAYVTKTGPIENLLTHLSDPVHNTIIQR 205
Query: 179 IS 180
I+
Sbjct: 206 IA 207
>gi|307110008|gb|EFN58245.1| hypothetical protein CHLNCDRAFT_34387 [Chlorella variabilis]
Length = 336
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 90/160 (56%), Gaps = 15/160 (9%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTG-ALLLDGNTLNYFGK--- 74
Y EL+HARWAMLGA G ++PE G+ E W+ G A L G L Y G
Sbjct: 168 YVELELLHARWAMLGALGAVVPELLQLAGSATFLEDRWWNVGYAKLTTGEELAYLGVPGL 227
Query: 75 NIPINLVFAVIA--EIVLVGGAEYYRITNGLDLE--------DKLHPGGP-FDPLGLAKD 123
+ A+IA +++L+ G EY R LE DK +PGG FDPL L+ D
Sbjct: 228 RVAGGQGVAIIAFCQVLLMFGPEYARACGISALEPLGVFLPGDKNYPGGWLFDPLQLSGD 287
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
+++ ++V+EIKNGRLAM A LGF QA VT +GPV+NL
Sbjct: 288 AERYEAMRVREIKNGRLAMVAWLGFAAQAAVTRQGPVQNL 327
>gi|169193|gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
Length = 76
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 55/64 (85%)
Query: 111 PGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
PGG FDPLGLA DP+ FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP
Sbjct: 1 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 60
Query: 171 FANN 174
NN
Sbjct: 61 VNNN 64
>gi|302854495|ref|XP_002958755.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
gi|300255930|gb|EFJ40211.1| hypothetical protein VOLCADRAFT_69853 [Volvox carteri f.
nagariensis]
Length = 88
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 56/68 (82%)
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
D L+PG FDPLGLA DPD FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL H
Sbjct: 9 DPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLNDH 68
Query: 167 LSDPFANN 174
L++P NN
Sbjct: 69 LANPAVNN 76
>gi|168052965|ref|XP_001778909.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669663|gb|EDQ56245.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 90/164 (54%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIHARWAML G +IPEA N W T G Y G +P
Sbjct: 39 FKESELIHARWAMLAVPGVLIPEALGY--GNWVSAQKWAAT-----PGGQATYLGNPVPW 91
Query: 79 NLVFAVIA-EIVLVGGAEYYRITNG-LDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 136
+ ++A E + + AE R NG D E + +PGG FDP+G +K + LK+KEIK
Sbjct: 92 GTLPVILAVEFIAIAFAESQR--NGESDPEKRKYPGGAFDPMGFSKGAN-LEELKLKEIK 148
Query: 137 NGRLAMFAMLGFFLQAYV-TGEGPVENLAKHLSDPFANNLLTVI 179
NGRLA+ A LGF +QA G GP+ENL HL+DP+ N + ++
Sbjct: 149 NGRLALVAFLGFAIQAIAYPGTGPLENLKTHLADPWHNTIANIL 192
>gi|159478202|ref|XP_001697193.1| chlorophyll a-b binding protein of photosystem II [Chlamydomonas
reinhardtii]
gi|60391855|sp|Q93WD2.3|CB29_CHLRE RecName: Full=Chlorophyll a-b binding protein CP29; AltName:
Full=Lhcbm4
gi|15430560|dbj|BAB64415.1| light-harvesting chlorophyll-a/b binding protein Lhcb4
[Chlamydomonas reinhardtii]
gi|15430568|dbj|BAB64419.1| light-harvesting chlorophyll-a/b binding protein Lhcb4
[Chlamydomonas reinhardtii]
gi|27542567|gb|AAO16494.1| CP29-like protein [Chlamydomonas reinhardtii]
gi|158274667|gb|EDP00448.1| chlorophyll a-b binding protein of photosystem II [Chlamydomonas
reinhardtii]
Length = 280
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAML G ++ EA W + G + LDG +Y G ++P
Sbjct: 133 FRECELIHGRWAMLACLGALVAEATTGVS--------WVEAGKVELDG--ASYAGLSLPF 182
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIKN 137
++ + E++LVGGAE+YR + + E + +PGG FDPL LA + ++ A LK EIK+
Sbjct: 183 SITQLIWIEVILVGGAEFYRNSE-TNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKH 241
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLAK 165
RLAM + G+ +QA TGEG + +LAK
Sbjct: 242 ARLAMVSFFGYGVQALSTGEGALGSLAK 269
>gi|384248196|gb|EIE21681.1| chlorophyll a/b-binding protein CP29 [Coccomyxa subellipsoidea
C-169]
Length = 267
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 12/135 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
++ ELIH RWAMLGA G +I EA W G + LDG Y G ++P
Sbjct: 133 FRETELIHGRWAMLGALGVVIAEATTGVS--------WVDAGKVELDGT--QYLGFSLPF 182
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIKN 137
++ + E++LVGGAE YR DL+++++PGG FDPL LA D Q L+ EIK+
Sbjct: 183 SISQLIWIEVLLVGGAEIYR-NRSTDLQERIYPGGLFDPLKLASDDSQRTFKLREAEIKH 241
Query: 138 GRLAMFAMLGFFLQA 152
GRLAM A LG LQ+
Sbjct: 242 GRLAMVAFLGAQLQS 256
>gi|224101127|ref|XP_002312153.1| light-harvesting complex II protein Lhcb8 [Populus trichocarpa]
gi|222851973|gb|EEE89520.1| light-harvesting complex II protein Lhcb8 [Populus trichocarpa]
Length = 275
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLGTLGAIAVEALTG--------VAWQDAGKVELIEGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E+++VG E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK+
Sbjct: 186 FSLTTLIWIEVIVVGYIEFQRNAE-LDPEKRLYPGGYFDPLGLASDPEKIENLQLAEIKH 244
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F +QA TG+GP+ +A
Sbjct: 245 ARLAMVAFLIFGIQAAFTGKGPISFVA 271
>gi|297744047|emb|CBI37017.3| unnamed protein product [Vitis vinifera]
Length = 183
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 81/152 (53%), Gaps = 48/152 (31%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH RWAMLGA G + PE ++ G G EAVWFK ++
Sbjct: 68 EVIHCRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAA--------------------IW 106
Query: 83 AVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAM 142
A +++L+G E YRI G PLG +VKEIKNGRLAM
Sbjct: 107 AC--QVILMGAVEGYRIGGG--------------PLG-----------EVKEIKNGRLAM 139
Query: 143 FAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
F+M GFF+QA VTG+GP+ENLA HL+DP NN
Sbjct: 140 FSMFGFFVQAIVTGKGPLENLADHLADPVNNN 171
>gi|388508808|gb|AFK42470.1| unknown [Lotus japonicus]
Length = 259
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+HARWAMLG +G +IPE K G W++ G T YF P L
Sbjct: 96 ELMHARWAMLGVSGILIPELLEKMGYVE--NYSWYEAG-------TQEYFAD--PTTLFI 144
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
+A + V G + + N +D+E KL +PGG FDP+ + P+
Sbjct: 145 VQLALMGWVEGRRWADLVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMMWGRGSPEPV 204
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+L+ KEIKNGRLAM A +GF+ QA TG+GP+ENL HL+DP N+ + +
Sbjct: 205 MVLRTKEIKNGRLAMLAFVGFWFQAIYTGQGPIENLMAHLADPGHCNIFSAFTSR 259
>gi|384247027|gb|EIE20515.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
Length = 255
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 93/182 (51%), Gaps = 31/182 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+H+R+AM AG +IPE FGA P VW++ G + +
Sbjct: 68 SLKWYVQSELVHSRFAMAAVAGILIPEVLKAFGAVNLP--VWYEAGKYAQESSP------ 119
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITN--------------GLD-----LEDKLHPGGPF 115
IP N + A+ EI E R + GL+ + +PGG F
Sbjct: 120 -IPFNTLIAL--EIFAFNFVEIKRWQDFKKPGSQGEEGSFVGLEGFFKGTGENGYPGGVF 176
Query: 116 DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
DPLGL+K P + +K++EIKNGRLAM A +GF Q TG+GP+ENL HLS+P ANN
Sbjct: 177 DPLGLSKGPG-YEAMKLREIKNGRLAMLAFIGFASQYLATGKGPIENLLDHLSNPLANNF 235
Query: 176 LT 177
T
Sbjct: 236 TT 237
>gi|357137970|ref|XP_003570571.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 259
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 92/175 (52%), Gaps = 28/175 (16%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G + P VWF+ GA D NT F
Sbjct: 90 YVQAELVHCRFAMAGVAGILGTDLIRVSGISNLP--VWFEAGATKFDFANTTALF----- 142
Query: 78 INLVFAVIAEIVLVGGAEYYRITNG---------LDLEDKL------HPGGP-FDPLGLA 121
F + + V Y I N L +E L +PGGP F+P+GLA
Sbjct: 143 ----FVQLLLMGFVETKRYMDIVNPGSQAEEGTFLGIEASLEGLQPGYPGGPLFNPMGLA 198
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
KD +K+KEIKNGRLAM AMLGFF+QA VT GP++NL HLSDPF NN++
Sbjct: 199 KDIKNAHEVKLKEIKNGRLAMVAMLGFFVQASVTHVGPIDNLLIHLSDPFNNNII 253
>gi|118489878|gb|ABK96737.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 275
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 136 FRECELIHGRWAMLGTLGAIAVEALTG--------VAWQDAGKVELIEGSS--YLGQPLP 185
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E++++G E+ R LD E +L+PGG FDPLGLA DP++ L++ EIK+
Sbjct: 186 FSLTTLIWIEVIVIGYIEFQRNAE-LDPEKRLYPGGYFDPLGLASDPEKIENLQLAEIKH 244
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F +QA TG+GP+ +A
Sbjct: 245 ARLAMVAFLIFGIQAAFTGKGPISFVA 271
>gi|194704284|gb|ACF86226.1| unknown [Zea mays]
Length = 269
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 94/184 (51%), Gaps = 34/184 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G + P VWF+ GA D NT F
Sbjct: 100 YVQAELVHCRFAMAGVAGILFTDLLRVSGNSDLP--VWFEAGAAKFDFANTTALF----- 152
Query: 78 INLVFAVIAEIVLVGGAEYYRITN--------------GLDL----EDKLHPGGP-FDPL 118
++ L+G AE R + GL+ + +PGGP F+PL
Sbjct: 153 -------FVQLFLMGFAETKRYMDFKNPGSQAEEGTFIGLEAALAGQQPGYPGGPLFNPL 205
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLAKD + K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++
Sbjct: 206 GLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLTHLSDPFNKNIIHT 265
Query: 179 ISGN 182
S +
Sbjct: 266 FSSS 269
>gi|413939030|gb|AFW73581.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 315
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 94/184 (51%), Gaps = 34/184 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G + P VWF+ GA D NT F
Sbjct: 146 YVQAELVHCRFAMAGVAGILFTDLLRVSGNSDLP--VWFEAGAAKFDFANTTALF----- 198
Query: 78 INLVFAVIAEIVLVGGAEYYRITN--------------GLDL----EDKLHPGGP-FDPL 118
++ L+G AE R + GL+ + +PGGP F+PL
Sbjct: 199 -------FVQLFLMGFAETKRYMDFKNPGSQAEEGTFIGLEAALAGQQPGYPGGPLFNPL 251
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLAKD + K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++
Sbjct: 252 GLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLTHLSDPFNKNIIHT 311
Query: 179 ISGN 182
S +
Sbjct: 312 FSSS 315
>gi|226498858|ref|NP_001148187.1| LOC100281795 [Zea mays]
gi|195616580|gb|ACG30120.1| chlorophyll a-b binding protein 4 [Zea mays]
Length = 269
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 94/184 (51%), Gaps = 34/184 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G + P VWF+ GA D NT F
Sbjct: 100 YVQAELVHCRFAMAGVAGILFTDLLRVSGNSDLP--VWFEAGAAKFDFANTTALF----- 152
Query: 78 INLVFAVIAEIVLVGGAEYYRITN--------------GLDL----EDKLHPGGP-FDPL 118
++ L+G AE R + GL+ + +PGGP F+PL
Sbjct: 153 -------FVQLFLMGFAETKRYMDFKNPGSQAEEGTFIGLEAALAGQQPGYPGGPLFNPL 205
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLAKD + K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++
Sbjct: 206 GLAKDIENAHDEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLTHLSDPFNKNIIHT 265
Query: 179 ISGN 182
S +
Sbjct: 266 FSSS 269
>gi|312281687|dbj|BAJ33709.1| unnamed protein product [Thellungiella halophila]
Length = 276
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 86/147 (58%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 137 FRECELIHGRWAMLGTLGAIAVEALTGI--------AWQDAGKVELVEGSS--YLGQPLP 186
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E+++VG E+ R LD E +++PGG FDPLGL DP++ LK+ EIK+
Sbjct: 187 FSLTTLIWIEVLVVGYIEFQRNAE-LDPEKRIYPGGYFDPLGLGSDPEKLDTLKLAEIKH 245
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F LQA TG+GP+ +A
Sbjct: 246 SRLAMVAFLIFGLQAAFTGKGPISFIA 272
>gi|168049224|ref|XP_001777064.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671629|gb|EDQ58178.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE + G A+ WF++G + GN +Y+ P L
Sbjct: 51 EIINGRFAMLGAAGAIAPEVLGRIGLIPQETAIPWFQSGVIPPVGN-YSYWAD--PYTLF 107
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGP F+ LG K
Sbjct: 108 ---VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGK 164
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
+ + LKVKE+KNGRLAM A+LG+F QA TG GP +NL HL+DP NN+LT
Sbjct: 165 NEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNVLT 219
>gi|168065932|ref|XP_001784899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663529|gb|EDQ50288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE + G A+ WF++G + GN +Y+ P L
Sbjct: 51 EIINGRFAMLGAAGAIAPEVLGRIGLIPQETAIPWFQSGVIPPVGN-YSYWAD--PYTLF 107
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGP F+ LG K
Sbjct: 108 ---VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGK 164
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
+ + LKVKE+KNGRLAM A+LG+F QA TG GP +NL HL+DP NN+LT
Sbjct: 165 NEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNVLT 219
>gi|302851012|ref|XP_002957031.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
gi|300257587|gb|EFJ41833.1| light-harvesting chlorophyll-a/b protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 270
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 94/180 (52%), Gaps = 29/180 (16%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEA---VWFKTGALLLDGNTLNYFGKNI 76
Q E+IH RWAMLGAAG I PE A PE VW+++G + G+ Y+
Sbjct: 89 QYSEVIHGRWAMLGAAGCIAPEILG--AAGLIPEKTNIVWYESGVIPPAGSYDGYWAD-- 144
Query: 77 PINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGPF-DP 117
P + F EIV + AE R+ + L LE D +PGGPF +
Sbjct: 145 PYTIFFI---EIVAMQFAELRRLQDFRYPGSMGKQYFLGLEKIFAGSGDPAYPGGPFFNL 201
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
L K LK+KEIKNGRLAM AMLG+ QA +T EGP +NL HL+DP NN+LT
Sbjct: 202 FNLGKTEAAMKELKLKEIKNGRLAMLAMLGYGAQATLTREGPFQNLLDHLADPVNNNILT 261
>gi|302756045|ref|XP_002961446.1| light-harvesting complex [Selaginella moellendorffii]
gi|302776390|ref|XP_002971365.1| light-harvesting complex [Selaginella moellendorffii]
gi|300161347|gb|EFJ27963.1| light-harvesting complex [Selaginella moellendorffii]
gi|300170105|gb|EFJ36706.1| light-harvesting complex [Selaginella moellendorffii]
Length = 250
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 34/182 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H+R+AM G AG ++ + G P VW++ GA + +T F
Sbjct: 81 YVQAELVHSRFAMAGIAGILVTDLLRTVGGRDLP--VWYEAGATEFEFADTRTLF----- 133
Query: 78 INLVFAVIAEIVLVGGAEYYR----ITNG--------LDLEDKL------HPGGPF-DPL 118
+ +++L+G AE R I+ G L ED L +PGGPF DP
Sbjct: 134 -------VVQLILMGYAETRRYYDYISPGSQAAQDTFLGFEDALAGLQSGYPGGPFFDPA 186
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GL +D + LK KE+KNGRLAM A+LG F+QA+ T GP++NL H+SDP+ N ++
Sbjct: 187 GLGRDINNARTLKEKELKNGRLAMVAILGVFVQAFFTKTGPIDNLLTHVSDPWHNTIVQT 246
Query: 179 IS 180
+S
Sbjct: 247 LS 248
>gi|168049170|ref|XP_001777037.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671602|gb|EDQ58151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 26/175 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE + G A+ WF++G + GN +Y+ P L
Sbjct: 69 EIINGRFAMLGAAGAIAPEVLGRIGLIPQETAIPWFQSGVIPPVGN-YSYWAD--PYTLF 125
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLAK 122
+ E+ L+G AE+ R + L LE L +PGGP F+ LG K
Sbjct: 126 ---VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGLEKFLGGSGNPAYPGGPIFNFLGFGK 182
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
+ + LKVKE+KNGRLAM A+LG+F QA TG GP +NL HL+DP NN+LT
Sbjct: 183 NEKELQELKVKEVKNGRLAMMAVLGYFTQAIFTGVGPFQNLLDHLADPVHNNVLT 237
>gi|356568441|ref|XP_003552419.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
chloroplastic-like [Glycine max]
Length = 278
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 13/148 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLGA G ++ EA W G + L++G++ Y G +P
Sbjct: 138 FRECELIHGRWAMLGALGALVVEALTG--------VAWQDAGKVELVEGSS--YLGLPLP 187
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
+L + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 188 FSLTTLIWIEVIVIGYIEFQRNAE-LDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIK 246
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLA 164
+ RLAM L F +QA VTG+GP+ LA
Sbjct: 247 HSRLAMVVFLIFAIQAAVTGKGPISFLA 274
>gi|242066618|ref|XP_002454598.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
gi|241934429|gb|EES07574.1| hypothetical protein SORBIDRAFT_04g034130 [Sorghum bicolor]
Length = 266
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 95/184 (51%), Gaps = 34/184 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+H R+AM G AG + + G + P VWF+ GA + NT F
Sbjct: 97 YVQAELVHCRFAMAGVAGILFTDLLRVSGNSDLP--VWFEAGAAKFEFANTTALF----- 149
Query: 78 INLVFAVIAEIVLVGGAEYYRITN--------------GLDL----EDKLHPGGP-FDPL 118
+++L+G AE R + GL+ + +PGGP F+PL
Sbjct: 150 -------FVQLLLMGFAETKRYMDFKNPGSQAEEGTFIGLEAALAGQQPGYPGGPLFNPL 202
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLAKD + K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++
Sbjct: 203 GLAKDIENAHEEKLKEIKNGRLAMVAMLGFMVQASVTHAGPIDNLLTHLSDPFNKNIIHA 262
Query: 179 ISGN 182
S +
Sbjct: 263 FSSS 266
>gi|413935744|gb|AFW70295.1| hypothetical protein ZEAMMB73_802965 [Zea mays]
Length = 150
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 83/152 (54%), Gaps = 12/152 (7%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIPI-NLVFAVIAEI 88
ML G ++PEA W K + G Y G +P L ++ E
Sbjct: 1 MLAVPGILVPEALGL--------GNWVKAQEWAAVPGGQATYLGAPVPWGTLPTILVIEF 52
Query: 89 VLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 148
V + AE+ R T D E K +PGG FDPLG +KDP +F K+KEIKNGRLAM A +GF
Sbjct: 53 VAIAFAEHQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGF 111
Query: 149 FL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
+ Q+ G GP+ENLA HL+DP+ NN+ +I
Sbjct: 112 CVQQSAYPGTGPLENLASHLADPWHNNIGDII 143
>gi|380447755|gb|AFD54060.1| morphogenesis protein [Leymus secalinus]
Length = 268
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R AM+G G I PEA K G A+ WF+ GA+ G T Y+ P L
Sbjct: 94 EIFNGRTAMMGVVGMIAPEALGKVGLVPSETAIPWFQAGAIPPAG-TYQYWAD--PYTLF 150
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA- 121
+ E+ L+G AE+ R+ + L LE D +PGGP F+PLG
Sbjct: 151 ---VFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 207
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A LG LQA TG GP +NL HLSDP NN+LT +
Sbjct: 208 KSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSLK 266
>gi|384253051|gb|EIE26526.1| hypothetical protein COCSUDRAFT_52367 [Coccomyxa subellipsoidea
C-169]
Length = 246
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 95/179 (53%), Gaps = 34/179 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNI 76
YQ EL + RWAML AAG + + GA GP A WFK + YF
Sbjct: 76 YQQAELQNGRWAMLAAAGILFVDLLGHLGAG-GPAAATPWFKA-------SDFTYFA--- 124
Query: 77 PINLVFAVIAEIVLVGGAEYYR----ITNGLDLEDKL-------------HPGGPFDPLG 119
P + +F I E++L E R + G +D + +PGG FDPLG
Sbjct: 125 PTSTLF--IVELLLFAWVEVRRYQDMVKPGSTNQDPIFSQYSLPSGNEPGYPGGIFDPLG 182
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
+K A LK+KEIKN RLAM A+LGFF+QA TG+ P+++L+ HL+DP++NN+ +
Sbjct: 183 YSKG--NMAELKLKEIKNARLAMLAVLGFFVQAKTTGKTPLDSLSSHLADPWSNNVFGI 239
>gi|87313163|gb|ABD37878.1| light-harvesting chlorophyll-a/b binding protein Lhca1 [Mesostigma
viride]
gi|145079752|tpg|DAA05929.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Mesostigma viride]
Length = 225
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 73
S + Y+ E+++ RWAMLG AG + PE + W + G Y G
Sbjct: 72 VSLARYREAEVMNGRWAMLGVAGMLAPELVG--------QGTWLSAQDWAVTGGKPTYLG 123
Query: 74 KNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLK 131
+P + E + + I+ GL+ + +++PGG FDPLG KD + K
Sbjct: 124 NELPYGFGTVLAVEFFCL---SWVEISRGLEKDPMKRIYPGGAFDPLGFGKD----EVNK 176
Query: 132 VKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
VKE++NGRLAM A +G + Q G GPV NL HL+DP NN
Sbjct: 177 VKELRNGRLAMVAFVGMWCQGIHVGGGPVSNLMDHLADPLHNN 219
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
+DPLGLAKDP A + E+ NGR AM + G L + G+G
Sbjct: 62 YDPLGLAKDPVSLARYREAEVMNGRWAMLGVAG-MLAPELVGQG 104
>gi|302830496|ref|XP_002946814.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
gi|300267858|gb|EFJ52040.1| hypothetical protein VOLCADRAFT_45832 [Volvox carteri f.
nagariensis]
Length = 227
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 100/181 (55%), Gaps = 31/181 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEA---VWFKTGALLLDGNTLNYFGKNIPIN 79
EL+HARWAMLGAAG + PE P+A +WFKTG L +Y +P+
Sbjct: 50 ELMHARWAMLGAAGCLAPEYLAH--EKVIPKATGLLWFKTGFLPQASAGFDY---GLPLG 104
Query: 80 LVFAVIAEIVLVG------GAEY-----YRITNGLDLEDKL---------HPGG-PFDPL 118
++FAV ++V++G GAEY R L LE + +PGG F+PL
Sbjct: 105 VLFAV--QMVMMGVAEGLRGAEYIAPGSLRNNKLLGLEKLIATTRAGSAAYPGGLMFNPL 162
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GL + P ++ EI++GRLAM A LG+ QA VTG GP +N +HL +P NN+L++
Sbjct: 163 GLGEKPAAMREMQQAEIRHGRLAMLACLGYAAQAVVTGRGPYDNWNRHLENPEENNVLSL 222
Query: 179 I 179
+
Sbjct: 223 L 223
>gi|297846882|ref|XP_002891322.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
gi|297337164|gb|EFH67581.1| light-harvesting complex protein [Arabidopsis lyrata subsp. lyrata]
Length = 256
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 33/185 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+H+R+AMLG AG + + G P VW++ GA+ D +
Sbjct: 80 SLRWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLP--VWYEAGAVKFDFASTKTL-- 135
Query: 75 NIPINLVFAVIAEIVLVGGAEYYR-------------------ITNGLDLEDKLHPGGPF 115
++ + +L+G AE R I L+ + +PGGP
Sbjct: 136 ---------IVVQFLLMGFAETKRYVDYVSPGSQAKEGSFFFGIEAALEGLEPGYPGGPL 186
Query: 116 -DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD K+KEIKNGRLAM AMLGFF+QA VT GP++NL +HLS+P+
Sbjct: 187 LNPLGLAKDIKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKT 246
Query: 175 LLTVI 179
++ +
Sbjct: 247 IIQTL 251
>gi|168060921|ref|XP_001782441.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666112|gb|EDQ52776.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 87/176 (49%), Gaps = 32/176 (18%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+K G YF +
Sbjct: 56 ELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYKAG-------DATYFADQGTL---- 102
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+ AE R N L D +PGG FDPLG
Sbjct: 103 -FIVELLLMAWAESRRWADIARPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSE 161
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D+ ++ KE+KNGRLAM A+LG F+QA VT GP++NL HL+DP+ +L +S
Sbjct: 162 DKLKEIRTKEVKNGRLAMLAVLGAFVQANVTHVGPIDNLFAHLADPYHTTILQSVS 217
>gi|308812366|ref|XP_003083490.1| prasinophyte specific LHC gene (IC) [Ostreococcus tauri]
gi|63029291|gb|AAY27544.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.1
[Ostreococcus tauri]
gi|116055371|emb|CAL58039.1| prasinophyte specific LHC gene (IC), partial [Ostreococcus tauri]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 61 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 112
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI-------TNGLDLEDKLHPGGPFDPLGLAKD 123
+ +I EIVLVG AE YR +GL + D ++PGG FDPLGLA+
Sbjct: 113 APEGSGYPSFWNVLIIEIVLVGAAEAYRTGISDSPFDDGLTVGD-VNPGGRFDPLGLAES 171
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP +N+LT
Sbjct: 172 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQSHVADPVHSNVLT 224
>gi|326496799|dbj|BAJ98426.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509469|dbj|BAJ91651.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326509647|dbj|BAJ87039.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTL 69
Q Y EL+H R+AM G AG + + G P VWF+ GA D NT
Sbjct: 80 EQPEDLKWYVQAELVHCRFAMAGVAGILGTDLIRVSGIGNLP--VWFEAGATKFDFANTT 137
Query: 70 NYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKL------HPGGP-FDPLGLAK 122
F + + + V + L +E L +PGGP F+P+GLAK
Sbjct: 138 ALFFVQLLLMGFVETKRYMDFVSPGSQAKEGTFLGIEASLEGLQPGYPGGPLFNPMGLAK 197
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
D + +K+KEIKNGRLAM AMLGF +QA VT GP++NL HLSDPF N++ ++
Sbjct: 198 DIENANEVKLKEIKNGRLAMVAMLGFIVQASVTHAGPIDNLLTHLSDPFNKNIIHALT 255
>gi|63029307|gb|AAY27552.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.2
[Ostreococcus tauri]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 61 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 112
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI-------TNGLDLEDKLHPGGPFDPLGLAKD 123
+ +I EIVLVG AE YR +GL + D ++PGG FDPLGLA+
Sbjct: 113 APEGSGYPSFWNVLIIEIVLVGAAEAYRTGISDSPFDDGLTVGD-VNPGGRFDPLGLAES 171
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP +N+LT
Sbjct: 172 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQSHVADPVHSNVLT 224
>gi|308806061|ref|XP_003080342.1| prasinophyte specific LHC (IC) [Ostreococcus tauri]
gi|63029309|gb|AAY27553.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.3
[Ostreococcus tauri]
gi|116058802|emb|CAL54509.1| prasinophyte specific LHC (IC), partial [Ostreococcus tauri]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 61 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 112
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI-------TNGLDLEDKLHPGGPFDPLGLAKD 123
+ +I EIVLVG AE YR +GL + D ++PGG FDPLGLA+
Sbjct: 113 APEGSGYPSFWNVLIIEIVLVGAAEAYRTGISDSPFDDGLTVGD-VNPGGRFDPLGLAES 171
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP +N+LT
Sbjct: 172 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQSHVADPVHSNVLT 224
>gi|145344454|ref|XP_001416747.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|145345055|ref|XP_001417039.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|145348539|ref|XP_001418704.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|145354851|ref|XP_001421688.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144576973|gb|ABO95040.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144577265|gb|ABO95332.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144578934|gb|ABO96997.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
gi|144581926|gb|ABO99981.1| prasinophyte light harvesting complex, chlorophyll binding
[Ostreococcus lucimarinus CCE9901]
Length = 233
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 61 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 112
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI-------TNGLDLEDKLHPGGPFDPLGLAKD 123
+ +I EIVLVG AE YR +GL + D ++PGG FDPLGLA+
Sbjct: 113 APEGSGYPSFWNVLIIEIVLVGAAEAYRTGISDSPFDDGLTVGD-VNPGGRFDPLGLAES 171
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP +N+LT
Sbjct: 172 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQSHVADPVHSNVLT 224
>gi|15220077|ref|NP_175137.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|30693978|ref|NP_849778.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|12321000|gb|AAG50618.1|AC083835_3 light-harvesting complex protein [Arabidopsis thaliana]
gi|17063199|gb|AAL32974.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|19699116|gb|AAL90924.1| At1g45474/F2G19.4 [Arabidopsis thaliana]
gi|62320735|dbj|BAD95402.1| light-harvesting complex protein [Arabidopsis thaliana]
gi|332193996|gb|AEE32117.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
gi|332193997|gb|AEE32118.1| photosystem I light harvesting complex protein 5 [Arabidopsis
thaliana]
Length = 256
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 95/185 (51%), Gaps = 33/185 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+H+R+AMLG AG + + G P VW++ GA+ D +
Sbjct: 80 SLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLP--VWYEAGAVKFDFASTKTL-- 135
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITNGLD-------------LEDKL------HPGGPF 115
++ + +L+G AE R + + LE L +PGGP
Sbjct: 136 ---------IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPL 186
Query: 116 -DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD K+KEIKNGRLAM AMLGFF+QA VT GP++NL +HLS+P+
Sbjct: 187 LNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKT 246
Query: 175 LLTVI 179
++ +
Sbjct: 247 IIQTL 251
>gi|225425420|ref|XP_002277906.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vitis
vinifera]
gi|297738455|emb|CBI27656.3| unnamed protein product [Vitis vinifera]
Length = 271
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 83/166 (50%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E++H RWAMLGAAG IPE K G P W+ G L YF + +V
Sbjct: 108 EIVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEL-------EYFTDKTTLFIV- 157
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
E++ +G AE R N L D +PGG FDPLG P
Sbjct: 158 ----EMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 213
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
D+ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 214 DKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLFAHLADP 259
>gi|222423311|dbj|BAH19631.1| AT1G45474 [Arabidopsis thaliana]
Length = 248
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 95/185 (51%), Gaps = 33/185 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+H+R+AMLG AG + + G P VW++ GA+ D +
Sbjct: 72 SLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLP--VWYEAGAVKFDFASTKTL-- 127
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITNGLD-------------LEDKL------HPGGPF 115
++ + +L+G AE R + + LE L +PGGP
Sbjct: 128 ---------IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPL 178
Query: 116 -DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD K+KEIKNGRLAM AMLGFF+QA VT GP++NL +HLS+P+
Sbjct: 179 LNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKT 238
Query: 175 LLTVI 179
++ +
Sbjct: 239 IIQTL 243
>gi|326510901|dbj|BAJ91798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R AM+G G I PEA K G A+ WF+ GA+ G T Y+ P L
Sbjct: 95 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAG-TYQYWAD--PYTLF 151
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA- 121
+ E+ L+G AE+ R+ + L LE D +PGGP F+PLG
Sbjct: 152 ---VFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 208
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A LG LQA TG GP +NL HLSDP NN+LT +
Sbjct: 209 KSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSLK 267
>gi|149242542|pdb|2O01|3 Chain 3, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 165
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 26/166 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+I+ R+AMLGAAG I PE K G A+ WF+TG + G T Y+ N +
Sbjct: 6 EIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAG-TYTYWADNYTL--- 61
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGPF-DPLGLAK 122
+ E+ L+G AE+ R+ + L LE L +PGGPF +PLG K
Sbjct: 62 --FVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK 119
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLS 168
D LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL HL+
Sbjct: 120 DEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLA 165
>gi|164612849|gb|ABY63668.1| chloroplast chlorophyll a/b binding protein [Phyllostachys edulis]
Length = 262
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 99 ELVHCRWAMLGAAGIFIPEFLTKIGILSTPS--WYTAGEQQYFTDTTTLF---------- 146
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R N L D +PGG FDPLG P
Sbjct: 147 --IIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 204
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP N+ +
Sbjct: 205 EKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHANIFQAFT 260
>gi|21593722|gb|AAM65689.1| light-harvesting complex protein [Arabidopsis thaliana]
Length = 256
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 33/185 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+H+R+AMLG AG + + G P VW++ GA+ D +
Sbjct: 80 SLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLP--VWYEAGAVKFDFASTKTL-- 135
Query: 75 NIPINLVFAVIAEIVLVGGAE-------------------YYRITNGLDLEDKLHPGGPF 115
++ + +L+G AE ++ I L+ + +PGGP
Sbjct: 136 ---------IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGIEAALEGLEPGYPGGPL 186
Query: 116 -DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD K+KEIKNGRLAM AMLGFF+QA VT GP++NL +HLS+P+
Sbjct: 187 LNPLGLAKDVKNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHXT 246
Query: 175 LLTVI 179
++ +
Sbjct: 247 IIQTL 251
>gi|326514018|dbj|BAJ92159.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R AM+G G I PEA K G A+ WF+ GA+ G T Y+ P L
Sbjct: 95 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAG-TYQYWAD--PYTLF 151
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA- 121
+ E+ L+G AE+ R+ + L LE D +PGGP F+PLG
Sbjct: 152 ---VFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 208
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A LG LQA TG GP +NL HLSDP NN+LT +
Sbjct: 209 KSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSLK 267
>gi|308802077|ref|XP_003078352.1| prasinophyte specific LHC (IC) [Ostreococcus tauri]
gi|116056804|emb|CAL53093.1| prasinophyte specific LHC (IC), partial [Ostreococcus tauri]
Length = 212
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 40 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 91
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI-------TNGLDLEDKLHPGGPFDPLGLAKD 123
+ +I EIVLVG AE YR +GL + D ++PGG FDPLGLA+
Sbjct: 92 APEGSGYPSFWNVLIIEIVLVGAAEAYRTGISDSPFDDGLTVGD-VNPGGRFDPLGLAES 150
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP +N+LT
Sbjct: 151 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQSHVADPVHSNVLT 203
>gi|255074955|ref|XP_002501152.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226516415|gb|ACO62410.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 293
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 93/173 (53%), Gaps = 26/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEA---VWFKTGALLLDGNTLNYFGKNIPI- 78
E+IH RWAMLG AG + PE G PE+ VWF +GA+ G T +Y+ + I
Sbjct: 116 EVIHGRWAMLGVAGIVAPEILGGMGVI--PESTGLVWFTSGAIPPQG-TFDYWANPMTIF 172
Query: 79 --NLVFAVIAEIVLVGGAEYY-----RITNGLDLE-------DKLHPGGP-FDPLGLAKD 123
N+ AEI G +Y+ T L E + +PGG F+P L KD
Sbjct: 173 WVNMCMMNFAEIKR--GQDYWFPGSQAETPLLGWEKGFGGSGNPTYPGGKWFNPFNLGKD 230
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
A ++ KE+KNGRLAM A LG +QA VTGEGP +N+ H++DPF N+L
Sbjct: 231 --DMASMQKKEVKNGRLAMMAFLGCMVQAAVTGEGPWKNICDHVADPFGANML 281
>gi|87313187|gb|ABD37890.1| light-harvesting chlorophyll-a/b binding protein Lhcb4 [Mesostigma
viride]
gi|145079643|tpg|DAA05922.1| TPA_inf: chloroplast light-harvesting complex protein CP29
precursor Lhcb4 [Mesostigma viride]
Length = 306
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 11/154 (7%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S ++ ELI+ RWAMLG AG + E + G N W G ++L+ + ++ G
Sbjct: 154 SIERFRETELINGRWAMLGVAGALAGEM--QTGIN------WVDIGKVMLEQGS-SFGGL 204
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPD-QFALLKVK 133
+P + VI E+VLVG AE R N LD E +L+PGGPFDP G K + + LK+
Sbjct: 205 PLPWTMTQLVIIEVVLVGWAEILR-NNELDPEKRLYPGGPFDPFGFTKASESRVNDLKLA 263
Query: 134 EIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHL 167
EIK+ RL M A LGF +Q TG GP++NLA L
Sbjct: 264 EIKHARLGMMASLGFAVQYAYTGAGPIKNLADVL 297
>gi|63029285|gb|AAY27541.1| chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.4
[Ostreococcus tauri]
Length = 211
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 39 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 90
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI-------TNGLDLEDKLHPGGPFDPLGLAKD 123
+ +I EIVLVG AE YR +GL + D ++PGG FDPLGLA+
Sbjct: 91 APEGSGYPSFWNVLIIEIVLVGAAEAYRTGISDSPFDDGLTVGD-VNPGGRFDPLGLAES 149
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP +N+LT
Sbjct: 150 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQSHVADPVHSNVLT 202
>gi|357465507|ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355492086|gb|AES73289.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 34/190 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFG 73
S Y EL+H+R+AMLG G ++ + G N P +WF+ GA+ + NT
Sbjct: 92 SLKWYVQAELVHSRFAMLGVLGILVTDLLRVAGVNSIP--IWFEAGAVKYEFANTGTL-- 147
Query: 74 KNIPINLVFAVIAEIVLVGGAEYYRITNGLD------------LEDKL------HPGGPF 115
V+ +++L+G AE R + + LE L +PGGP
Sbjct: 148 ----------VVVQLLLMGYAETRRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPL 197
Query: 116 -DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD K+KEIKNGRLAM A+LG F+QA VT GP++NL +HLS+P+
Sbjct: 198 LNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKT 257
Query: 175 LLTVISGNAE 184
++ +++ ++
Sbjct: 258 IIQILASSSS 267
>gi|406362893|gb|AFS34654.1| chloroplast chlorophyll a-b binding protein, partial [Leymus
secalinus]
Length = 189
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R AM+G G I PEA K G A+ WF+ GA+ G T Y+ P L
Sbjct: 15 EIFNGRTAMMGVVGMIAPEALGKVGLVPPETAIPWFQAGAIPPAG-TYQYWAD--PYTLF 71
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLA- 121
+ E+ L+G AE+ R+ + L LE D +PGGP F+PLG
Sbjct: 72 ---VFEMALIGFAEHRRLQDWYNPGSMGKQYFLGLEKYLGGSGDPAYPGGPIFNPLGFGT 128
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A LG LQA TG GP +NL HLSDP NN+LT +
Sbjct: 129 KSEKEMKELKLKEIKNGRLAMLAFLGMSLQAIFTGVGPFQNLLDHLSDPVNNNILTSLK 187
>gi|168011208|ref|XP_001758295.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690330|gb|EDQ76697.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 270
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+K G YF +
Sbjct: 107 ELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYKAG-------DATYFADQGTL---- 153
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+ AE R N L D +PGG FDPLG
Sbjct: 154 -FIVELLLMAWAESRRWADIARPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSE 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
D+ ++ KE+KNGRLAM A+LG F+QA VT GP++NL HL+DP+ +L + G
Sbjct: 213 DKLKEIRTKEVKNGRLAMLAVLGAFVQANVTHVGPIDNLFAHLADPYHTTILQSLFGK 270
>gi|147841900|emb|CAN72005.1| hypothetical protein VITISV_033663 [Vitis vinifera]
Length = 272
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E++H RWAMLGAAG IPE K G P W+ G L YF +
Sbjct: 109 EIVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEL-------EYFTDKTTL---- 155
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++ +G AE R N L D +PGG FDPLG P
Sbjct: 156 -FIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 214
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
D+ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 215 DKIKELRTKEIKNGRLAMLAVMGAWFQAIYTGTGPIDNLFAHLADP 260
>gi|4741942|gb|AAD28768.1|AF134121_1 Lhca5 protein [Arabidopsis thaliana]
Length = 256
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 94/185 (50%), Gaps = 33/185 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+H+R+AMLG AG + + G P VW++ GA+ D
Sbjct: 80 SLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLP--VWYEAGAVKFDFACTKTL-- 135
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITNGLD-------------LEDKL------HPGGP- 114
++ + +L+G AE R + + LE L +PGGP
Sbjct: 136 ---------IVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPL 186
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD K+KEIKNGRLAM AMLGFF+QA VT GP++NL +HLS+P+
Sbjct: 187 LNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKT 246
Query: 175 LLTVI 179
++ +
Sbjct: 247 IIQTL 251
>gi|380504948|gb|AFD62761.1| LHCB, partial [Citrus sinensis]
Length = 169
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 85/147 (57%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG G I EA W G + L++G++ Y G+ +P
Sbjct: 30 FRECELIHGRWAMLGTLGAIAVEALTG--------VAWQDAGKVELVEGSS--YLGQPLP 79
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E++++G EY R LD +L+PGG FDPLGLA DP + L++ EIK+
Sbjct: 80 FSLTTLIWIEVIVIGYIEYQRNAE-LDPVKRLYPGGYFDPLGLASDPGKLENLQLAEIKH 138
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F +QA TG+GP+ +A
Sbjct: 139 ARLAMVAFLIFGIQAAFTGKGPISFVA 165
>gi|20792|emb|CAA41406.1| Type II chlorophyll a /b-binding protein [Pinus sylvestris]
Length = 278
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 83/166 (50%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L YF + +V
Sbjct: 115 ELVHCRWAMLGAAGIFIPELCTKLGILNTPS--WYTAG-------ELEYFTDKTTLFVV- 164
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
E++ +G AE R N L D +PGG FDPLG P
Sbjct: 165 ----EMIFLGWAEGRRWADILEPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 220
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 221 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLLAHLADP 266
>gi|307104824|gb|EFN53076.1| hypothetical protein CHLNCDRAFT_36644 [Chlorella variabilis]
Length = 275
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGA--NCGPEAVWFKTGALLLDGNTLNYFGKNIPINL 80
E+IH RWAMLG AGF+ PE GA EAVWF++G + G Y+ +
Sbjct: 98 EVIHCRWAMLGIAGFLAPEVLATIGAIPASPEEAVWFRSGVIPPAGQYGAYWTDAYTLFW 157
Query: 81 VFAVIAEIVLVGGAEYYRITNG------LDLE-------DKLHPGGPF-DPLGLAKDPDQ 126
V A++ + + Y+ L LE + +PGG F + L L K P+
Sbjct: 158 VEAIMMNFAELKRWQDYQSPGSQGKQYFLGLEAVFGGSGNPAYPGGQFFNMLNLGKTPEA 217
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
L+ EI+NGRLAM A LG F QA +T +GP NL HL+DP +NN+L
Sbjct: 218 MKKLQTNEIRNGRLAMIACLGCFGQAVMTTKGPFANLLDHLADPISNNVL 267
>gi|212274977|ref|NP_001130616.1| uncharacterized protein LOC100191715 [Zea mays]
gi|195636368|gb|ACG37652.1| chlorophyll a-b binding protein [Zea mays]
gi|414590632|tpg|DAA41203.1| TPA: chlorophyll a-b binding protein [Zea mays]
Length = 260
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 83/166 (50%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 97 ELVHCRWAMLGAAGIFIPEFLTKIGVLNTP--FWYTAGEQQYFTDTTTLF---------- 144
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R +N L D +PGG FDPLG P
Sbjct: 145 --IIELILIGWAEGRRWADIIKPGSVNTDPIFPSNKLTGTDVGYPGGLWFDPLGWGSGSP 202
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 203 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 248
>gi|145079812|tpg|DAA05938.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Micromonas sp. CCMP490]
Length = 309
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 92/172 (53%), Gaps = 24/172 (13%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFG---ANCGPEAVWFKTGALLLDGNTLNYFGKNIPI- 78
E+IH RWAMLG AG + PE G A+ G VWFK+GA+ G T +Y+ I
Sbjct: 132 EVIHGRWAMLGVAGVVAPEVLGGMGIIPADTG--LVWFKSGAIPPQG-TFDYWADPTTIF 188
Query: 79 --NLVFAVIAEIVLVGGAEYYRITNG----LDLEDKL-------HPGGP-FDPLGLAKDP 124
N+V AE V G +Y + G + E +PGG F+ L K
Sbjct: 189 WVNMVLMNFAE-VKRGQDYWYPGSQGETPLMGWEKGFAGSGAPAYPGGKYFNFANLGKT- 246
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
A ++ KEIKNGRLAM A LG +QA TGEGP +N+ H+SDPFANN+L
Sbjct: 247 -DMAKMQKKEIKNGRLAMMAFLGIAVQAVATGEGPFKNIVDHISDPFANNML 297
>gi|49388156|dbj|BAD25284.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|49388341|dbj|BAD25451.1| putative chlorophyll a/b-binding protein type III precursor [Oryza
sativa Japonica Group]
gi|125538483|gb|EAY84878.1| hypothetical protein OsI_06243 [Oryza sativa Indica Group]
gi|125581168|gb|EAZ22099.1| hypothetical protein OsJ_05758 [Oryza sativa Japonica Group]
gi|215678980|dbj|BAG96410.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679371|dbj|BAG96511.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686386|dbj|BAG87647.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737482|dbj|BAG96612.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737505|dbj|BAG96635.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737512|dbj|BAG96642.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737560|dbj|BAG96690.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737570|dbj|BAG96700.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737580|dbj|BAG96710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737621|dbj|BAG96751.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737634|dbj|BAG96764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737653|dbj|BAG96783.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737729|dbj|BAG96859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737785|dbj|BAG96915.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765646|dbj|BAG87343.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767462|dbj|BAG99690.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 269
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R AM+G G + PE K G A+ WF+TG + G T Y+ P L
Sbjct: 95 EVFNGRTAMMGVVGMVAPELLGKLGLVPAETAIPWFQTGVIPPAG-TYTYWAD--PYTLF 151
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLA- 121
+ E+ LVG AE+ R + L LE L +PGGP F+PLG
Sbjct: 152 ---VFELALVGFAEHRRFQDWYTPGSMGKQYFLGLEKYLAGSGEPAYPGGPLFNPLGFGT 208
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A LGF +QA TG GPV+NL HL+DP NN+LT +
Sbjct: 209 KSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLK 267
>gi|357122261|ref|XP_003562834.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Brachypodium distachyon]
Length = 258
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 95 ELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAGEQTYFADTTTLF---------- 142
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R N L D +PGG FDPLG P
Sbjct: 143 --IVELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGSGSP 200
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP + + N
Sbjct: 201 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADPGHATIFRAFTPN 258
>gi|226499760|ref|NP_001148893.1| chlorophyll a-b binding protein [Zea mays]
gi|195622990|gb|ACG33325.1| chlorophyll a-b binding protein [Zea mays]
gi|414887286|tpg|DAA63300.1| TPA: chlorophyll a-b binding protein isoform 1 [Zea mays]
gi|414887287|tpg|DAA63301.1| TPA: chlorophyll a-b binding protein isoform 2 [Zea mays]
gi|414887288|tpg|DAA63302.1| TPA: chlorophyll a-b binding protein isoform 3 [Zea mays]
Length = 270
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 83/166 (50%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 107 ELVHCRWAMLGAAGIFIPEFLTKIGVLNTP--FWYTAGEQQYFTDTTTLF---------- 154
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R +N L D +PGG FDPLG P
Sbjct: 155 --IIELILIGWAEGRRWADIIKPGSVNTDPIFPSNKLTGTDVGYPGGLWFDPLGWGSGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 213 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 258
>gi|149392115|gb|ABR25924.1| chloroplast chlorophyll a-b binding protein 8 [Oryza sativa Indica
Group]
Length = 191
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 94/179 (52%), Gaps = 27/179 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLV 81
E+ + R AM+G G + PE K G A+ WF+TG + G T Y+ P L
Sbjct: 17 EVFNGRTAMMGVVGMVAPELLGKLGLVPAETAIPWFQTGVIPPAG-TYTYWAD--PYTLF 73
Query: 82 FAVIAEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLA- 121
+ E+ LVG AE+ R + L LE L +PGGP F+PLG
Sbjct: 74 ---VFELALVGFAEHRRFQDWYTPGSMGKQYFLGLEKYLAGSGEPAYPGGPLFNPLGFGT 130
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K + LK+KEIKNGRLAM A LGF +QA TG GPV+NL HL+DP NN+LT +
Sbjct: 131 KSEAEMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLK 189
>gi|115472983|ref|NP_001060090.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|34393511|dbj|BAC83072.1| putative photosystem I antenna protein [Oryza sativa Japonica
Group]
gi|113611626|dbj|BAF22004.1| Os07g0577600 [Oryza sativa Japonica Group]
gi|125558916|gb|EAZ04452.1| hypothetical protein OsI_26600 [Oryza sativa Indica Group]
gi|125600834|gb|EAZ40410.1| hypothetical protein OsJ_24861 [Oryza sativa Japonica Group]
gi|215678915|dbj|BAG96345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679008|dbj|BAG96438.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679048|dbj|BAG96478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215686399|dbj|BAG87660.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737439|dbj|BAG96569.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737698|dbj|BAG96828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737734|dbj|BAG96864.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767334|dbj|BAG99562.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 263
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 100 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEQQYFTDTTTLF---------- 147
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R N L D +PGG FDPLG P
Sbjct: 148 --IIELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSP 205
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 206 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 251
>gi|18376587|emb|CAC81065.1| putative chlorophyll A-B binding protein of LHCI type II precursor
[Picea abies]
Length = 278
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 83/166 (50%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L YF + +V
Sbjct: 115 ELVHCRWAMLGAAGIFIPELLTKLGILNTPS--WYTAG-------ELEYFTDKTTLFVV- 164
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
E++ +G AE R N L D +PGG FDPLG P
Sbjct: 165 ----EMIFLGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 220
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 221 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLLAHLADP 266
>gi|388506626|gb|AFK41379.1| unknown [Lotus japonicus]
Length = 147
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 82/152 (53%), Gaps = 12/152 (7%)
Query: 31 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL-LDGNTLNYFGKNIPINLVFAVIA-EI 88
ML G ++PEA W K L G Y G +P + V+A E
Sbjct: 1 MLAVPGILVPEALGL--------GNWVKAQEWAALPGGQATYLGNPVPWGTLPTVLAIEF 52
Query: 89 VLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGF 148
+ + E+ R D E K +PGG FDPLG +KDP +F KVKEIKNGRLA+ A +GF
Sbjct: 53 LAISFVEHQRSMEK-DPEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGF 111
Query: 149 FL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 179
+ Q+ G GP+ENLA HL+DP+ NN+ V+
Sbjct: 112 CVQQSAYPGTGPLENLATHLADPWHNNIGNVL 143
>gi|357461189|ref|XP_003600876.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
gi|355489924|gb|AES71127.1| Chlorophyll a-b binding protein CP29.3 [Medicago truncatula]
Length = 278
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 13/144 (9%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ E+IH RWAMLGA G + EAF W G + L++G++ YFG ++P
Sbjct: 138 FRECEVIHGRWAMLGALGALAVEAFTG--------VAWQDAGKVELVEGSS--YFGFSLP 187
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ + E++++G E+ R LD E +L+PGG F DPLGLA DP++ L++ EIK
Sbjct: 188 FSISTLIWIEVLVIGYIEFQRNAE-LDPEKRLYPGGKFFDPLGLASDPEEKERLQLAEIK 246
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPV 160
+ RLAM L F +QA VTG+GP+
Sbjct: 247 HSRLAMVVFLIFAIQAAVTGKGPI 270
>gi|37780998|gb|AAP35043.1| chlorophyll a/b binding protein, partial [Vitis vinifera]
Length = 166
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 28/170 (16%)
Query: 32 LGAAGFIIPEAFNKFGANCGPEAV--WFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIV 89
LGA G I PE K G PE WFKTG G T NY+ P L + E+
Sbjct: 1 LGAVGAIAPEILGKLGL-IPPETALPWFKTGVFPPAG-TYNYWAD--PYTLF---VFEMA 53
Query: 90 LVGGAEYYRITNG-----------LDLE-------DKLHPGGP-FDPLGLAKDPDQFALL 130
L+G AE+ R + L LE D +PGGP F+PLG KD L
Sbjct: 54 LMGFAEHRRFQDWANPGSMGKQYFLGLEKYLGGSGDPAYPGGPLFNPLGFGKDEKSLKDL 113
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K+KE+KNGRLAM A+LG+F Q VTG GP++NL HL+DP NN++T +
Sbjct: 114 KLKEVKNGRLAMLAILGYFAQGPVTGVGPLQNLLDHLADPVNNNIITSLK 163
>gi|115765|sp|P10708.1|CB12_SOLLC RecName: Full=Chlorophyll a-b binding protein 7, chloroplastic;
AltName: Full=LHCI type II CAB-7; Flags: Precursor
gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|170431|gb|AAA34159.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
gi|226546|prf||1601518A chlorophyll a/b binding protein II
Length = 270
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 79
Q EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 104 QQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAGEQEYFTDTTTLF------- 154
Query: 80 LVFAVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK 122
I E+VL+G AE R N L D +PGG FDPLG
Sbjct: 155 -----IVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGS 209
Query: 123 -DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
P + L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 210 GSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|303290578|ref|XP_003064576.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226454174|gb|EEH51481.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 286
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 93/175 (53%), Gaps = 30/175 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEA---VWFKTGALLLDGNTLNYFGKNIPI- 78
E+IH RWAMLG AG + PE + A PE+ VWF +GA+ G T +Y+ + I
Sbjct: 109 EVIHGRWAMLGVAGIVAPEILGQ--AGLIPESTGLVWFTSGAIPPQG-TFDYWANPMTIF 165
Query: 79 --NLVFAVIAEIVLVGGAEYYRITNGLDLEDKL--------------HPGGP-FDPLGLA 121
N+ AEI G +Y+ G E L +PGG F+ GL
Sbjct: 166 WVNMCMMNFAEIKR--GQDYWY--PGSQAEQPLMGWEKGFAGSGNPAYPGGKYFNFAGLG 221
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
KD A ++ KEIKNGRLAM A LG +QA VTGEGP +N+ H++DPF N+L
Sbjct: 222 KD--DMAKMQKKEIKNGRLAMMAFLGCMVQAVVTGEGPWKNICDHVADPFGANML 274
>gi|145079846|tpg|DAA05942.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca4 [Micromonas sp. CCMP490]
Length = 250
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 90/177 (50%), Gaps = 31/177 (17%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAF-NKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP 77
Y+ EL HARWAMLG G PE N F P W + A L DG Y
Sbjct: 80 YKQAELQHARWAMLGVTGMAAPELIQNPFVEGAMPN--WAE--APLWDG----YMASP-- 129
Query: 78 INLVFAVIAEIVLVGGAEYYRITN----GLDLEDKL-------------HPGGPFDPLGL 120
N +F V ++ ++ AE R + G ED L +P G FDP+G+
Sbjct: 130 -NTLFVV--QMFMMNWAEVRRWQDMKNPGTMNEDPLTGANKGDTNTDVGYPKGLFDPMGM 186
Query: 121 AKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
AKDP++ +LKVKEI NGRLAM A++G +Q TG GP+ NL HL+DP N + T
Sbjct: 187 AKDPEKVKVLKVKEIANGRLAMVAVMGCIIQNEATGVGPIANLKAHLADPAHNTIFT 243
>gi|356519222|ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Glycine max]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 34/190 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFG 73
S Y EL+H R+AMLG G ++ + G + P VWF+ GA+ D NT F
Sbjct: 88 SLRWYVQAELVHCRFAMLGVFGILVTDLLRVTGISKIP--VWFEAGAVKYDFANTKTLF- 144
Query: 74 KNIPINLVFAVIAEIVLVGGAEYYRITNGLD------------LEDKL------HPGGPF 115
+ ++VL+G E R + + LE L +PGGP
Sbjct: 145 -----------LVQLVLMGFVETKRYMDFVSPGSQAKEGSFFGLEASLKGLEPGYPGGPL 193
Query: 116 -DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLGLAKD + K+KEIKNGRLAM AMLG F+QA VT GP++NL +HLS+P+
Sbjct: 194 LNPLGLAKDINNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKT 253
Query: 175 LLTVISGNAE 184
++ ++ ++
Sbjct: 254 IIQTLANSSS 263
>gi|449435085|ref|XP_004135326.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
gi|449529174|ref|XP_004171576.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus]
Length = 271
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 20 QAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN 79
Q EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 105 QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF------- 155
Query: 80 LVFAVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK 122
I E++ +G AE R N L D +PGG FDPLG
Sbjct: 156 -----IVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGS 210
Query: 123 -DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
P++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 211 GSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 259
>gi|384246844|gb|EIE20333.1| light-harvesting chlorophyll a/b-binding protein Lhca2 [Coccomyxa
subellipsoidea C-169]
Length = 246
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 93/184 (50%), Gaps = 28/184 (15%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGA--NCGPEAVWFKTGALLLDGNTLNYF 72
S + Q E+IHARWAMLGAAG I PE G E +WFK+G + G Y+
Sbjct: 63 SPAWLQYSEVIHARWAMLGAAGCIAPEILATAGVIPQTPDEVIWFKSGVIPPAGVYDKYW 122
Query: 73 GKNIPINLVFAVIAEIVLVGGAEYYRITNG-----------LDLE-------DKLHPGGP 114
P +L F E++LV AE R + L LE D +PGG
Sbjct: 123 LD--PYSLFFI---EVILVQFAELRRWQDFRNPGSQGKQYFLGLEEVLKGSGDPSYPGGQ 177
Query: 115 F-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
F + L K LK KE+KNGRLAM A+ G+ QA +T EGP +NL HLSDP +
Sbjct: 178 FFNLFNLGKS--DLKELKTKELKNGRLAMLAVFGYGAQAVITAEGPFKNLTDHLSDPTGH 235
Query: 174 NLLT 177
N+LT
Sbjct: 236 NILT 239
>gi|666054|emb|CAA59049.1| LHCI-680, photosystem I antenna protein [Hordeum vulgare subsp.
vulgare]
gi|326493584|dbj|BAJ85253.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 92 ELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAGEQEYFTDTTTLF---------- 139
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R N L D +PGG FDPLG P
Sbjct: 140 --IVELILIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGTGSP 197
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 198 EKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 243
>gi|356539957|ref|XP_003538459.1| PREDICTED: chlorophyll a-b binding protein CP29.3,
chloroplastic-like [Glycine max]
Length = 282
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 13/148 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAMLG+ G + EA W G + L++G++ Y G +P
Sbjct: 142 FRECELIHGRWAMLGSLGALAVEALTG--------VAWQDAGKVELVEGSS--YLGLPLP 191
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
+L + E++++G E+ R LD E +L+PGG F DPLGLA DP++ A L++ EIK
Sbjct: 192 FSLTTLIWIEVIVIGYIEFQRNAE-LDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIK 250
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLA 164
+ RLAM L F +QA VTG+GP+ LA
Sbjct: 251 HSRLAMVVFLIFAIQAAVTGKGPISFLA 278
>gi|551047|emb|CAA55864.1| type II LHCI [Lolium temulentum]
Length = 253
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 90 ELVHCRWAMLGAAGIFIPELLTKIGILNTPS--WYTAGEQEYFTDTTTLF---------- 137
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
+ E++L+G AE R N L D +PGG FDPLG P
Sbjct: 138 --VVELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGYGNGSP 195
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 196 EKLKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLFAHLADP 241
>gi|302844283|ref|XP_002953682.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
gi|300261091|gb|EFJ45306.1| hypothetical protein VOLCADRAFT_106034 [Volvox carteri f.
nagariensis]
Length = 143
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 88 IVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAM 145
++L+G E YR+ E D L+ G FDPLGLA DPD F L VKE KNGRLAMF+M
Sbjct: 43 MILMGLVEGYRVNGSPAGEGLDPLYHGESFDPLGLADDPDTFTELMVKETKNGRLAMFSM 102
Query: 146 LGFFLQAYVTGEGPVENLAKHLSDPFANN 174
GFF+QA VTG P+ENL HL++P NN
Sbjct: 103 FGFFMQAIVTGNDPIENLNDHLANPGVNN 131
>gi|11066109|gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI [Chlamydomonas reinhardtii]
Length = 239
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 7 VSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDG 66
+S + S + E+IH RWAMLG AG + E +G W+ ++G
Sbjct: 62 LSLGKEPASLKRFTESEVIHGRWAMLGVAGSLAVELLG-YGN-------WYDAPLWAVNG 113
Query: 67 NTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQ 126
+FG +P +L + E V + AE + PGG FDPLG AKD +
Sbjct: 114 GKATWFGIEVPFDLNALLAFEFVAMAAAE----GQRRRCRRRRLPGGAFDPLGFAKDSSK 169
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
LK+KEIKNGRLAM A LGF Q TG+ P+ L +HL++P+A L
Sbjct: 170 SGELKLKEIKNGRLAMVAFLGFVAQHAATGKAPLAALGEHLANPWAPTL 218
>gi|225458605|ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|302142320|emb|CBI19523.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 100/185 (54%), Gaps = 34/185 (18%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFGKNIP 77
Y EL+HAR+AM G AG ++ + G + P VW++ GA+ + +T F
Sbjct: 94 YVQAELVHARFAMAGVAGILVTDLLRVTGISNLP--VWYEAGAVKFEFASTEALF----- 146
Query: 78 INLVFAVIAEIVLVGGAE---YYRITN-----------GLD--LE--DKLHPGGPF-DPL 118
I +++L+G E Y TN GL+ LE + +PGGP +PL
Sbjct: 147 -------IVQLILMGFVETKRYMDFTNPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPL 199
Query: 119 GLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
GLA+D K+KEIKNGRLAM AMLG F+QA VT GP+ENL +HLS+P+ ++
Sbjct: 200 GLARDIKNAHDWKLKEIKNGRLAMVAMLGVFVQASVTHAGPIENLVEHLSNPWHKTIIQT 259
Query: 179 ISGNA 183
IS +
Sbjct: 260 ISSTS 264
>gi|124388816|gb|ABN10530.1| Lhca5 protein [Gentiana lutea]
Length = 272
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 15/178 (8%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFG 73
S Y EL+H+R+AM G AG + + G + P VW++ GA NT F
Sbjct: 98 SLKWYVQAELVHSRFAMAGVAGILFTDLLRTTGLSNLP--VWYEAGATKFQFANTTTLF- 154
Query: 74 KNIPINLVFAVIAEIVLV--------GGAEYYRITNGLDLEDKLHPGGP-FDPLGLAKDP 124
I L+ + + G A ++ + L+ + +PGGP +PLG+AKD
Sbjct: 155 --IVQMLLMGFVETKRYMDFKNPGSQGEASFFGLEAALEGLEPGYPGGPILNPLGIAKDI 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
K+KEIKNGRLAM A+LG F+QA VT GP+ENL +HLSDP+ ++ ++S +
Sbjct: 213 KNAPEWKLKEIKNGRLAMVAILGIFVQASVTHVGPLENLVEHLSDPWHTTIIQILSAS 270
>gi|255547714|ref|XP_002514914.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223545965|gb|EEF47468.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 270
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 107 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYDAGKLEYFTDTTTLF---------- 154
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++ +G AE R N L D +PGG FDPLG P
Sbjct: 155 --IIELIFIGWAEGRRWADILKPGCVNTDPIFPNNRLTGTDVGYPGGLWFDPLGWGSGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 213 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|224057740|ref|XP_002299309.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222846567|gb|EEE84114.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 272
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 109 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF---------- 156
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 157 --IVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 214
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 215 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 260
>gi|449452592|ref|XP_004144043.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 26/176 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+HARWAML AG ++PE F G W+ D + YF P L+
Sbjct: 102 ELMHARWAMLAVAGILLPEWFESLGLIQ--NFSWY-------DAGSREYFAD--PTTLLV 150
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
A +A + V G + + N +D++ KL +PGG FDP+ + P+
Sbjct: 151 AQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKADVGYPGGFWFDPMMWGRGSPEPV 210
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+L+ KEIKNGRLAM A +G + QA TG+GP+ENLA H++DP N+ + S +
Sbjct: 211 MVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGS 266
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
FDPLGL DP+ E+ + R AM A+ G L + G ++N + +
Sbjct: 83 FDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWY 134
>gi|118489607|gb|ABK96605.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 261
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 32/190 (16%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ S + ELIH RWAML AAG +IPE + G F D T
Sbjct: 86 SDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLG---------FIDNFNWFDAGTRE 136
Query: 71 YFGKNIPINLVFAVIAEIVLVGGAEYYRITN-----GLDLEDKL-----------HPGG- 113
YF P L + +++L+G E R + +D++ KL +PGG
Sbjct: 137 YFAD--PTTLF---VVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDIGYPGGL 191
Query: 114 PFDPLGLAK-DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFA 172
FDP + P+ ++ KEIKNGRLAM A +GF+ QA TGEGP++NL H++DP
Sbjct: 192 WFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGH 251
Query: 173 NNLLTVISGN 182
N+ + + +
Sbjct: 252 CNIFSAFTSH 261
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
FDPLGL DP+ E+ +GR AM A G + ++ G ++N
Sbjct: 79 FDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLGFIDNF 127
>gi|224069184|ref|XP_002326295.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
gi|222833488|gb|EEE71965.1| light-harvesting complex I protein Lhca6 [Populus trichocarpa]
Length = 261
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 32/190 (16%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ S + ELIH RWAML AAG +IPE + G F D T
Sbjct: 86 SDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLG---------FIDNFNWFDAGTRE 136
Query: 71 YFGKNIPINLVFAVIAEIVLVGGAEYYRITN-----GLDLEDKL-----------HPGG- 113
YF P L + +++L+G E R + +D++ KL +PGG
Sbjct: 137 YFAD--PTTLF---VVQLILMGWIEGRRWADMIKPGCVDIDPKLPHKTKPKPDVGYPGGL 191
Query: 114 PFDPLGLAK-DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFA 172
FDP + P+ ++ KEIKNGRLAM A +GF+ QA TGEGP++NL H++DP
Sbjct: 192 WFDPWNWGRGSPEPVMAIRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIDNLMAHIADPGH 251
Query: 173 NNLLTVISGN 182
N+ + + +
Sbjct: 252 CNIFSAFTSH 261
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
FDPLGL DP+ E+ +GR AM A G + ++ G ++N
Sbjct: 79 FDPLGLGSDPESLKWFAQAELIHGRWAMLAAAGILIPEWLERLGFIDNF 127
>gi|255085312|ref|XP_002505087.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
gi|226520356|gb|ACO66345.1| chlorophyll a/b-binding protein, psi-associated, chloroplast
precursor [Micromonas sp. RCC299]
Length = 242
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 86/171 (50%), Gaps = 30/171 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLG AG + PE K G P W G DG Y+ P+ V
Sbjct: 84 ELMHCRWAMLGLAGMVGPELLTKIGMADLPN--WIDAGKW--DG----YWLGAGPLFFV- 134
Query: 83 AVIAEIVLVGGAEYYRITN----GLDLEDKL-------------HPGGPFDPLGLAKDPD 125
++ ++ AE R + G ED L +P G FDP+G AKDP
Sbjct: 135 ----QMAMMNWAEVRRWQDMKAPGTMNEDPLTGANKGDTNTDVGYPKGLFDPMGYAKDPK 190
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
+ LK KEI NGRLAM A++G F QA TG GPV+NL HL+DP NN+
Sbjct: 191 KAEELKRKEIANGRLAMVAIVGCFAQAISTGTGPVDNLFTHLADPGHNNIF 241
>gi|449500520|ref|XP_004161120.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus]
Length = 267
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 26/176 (14%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+HARWAML AG ++PE F G W+ D + YF P L+
Sbjct: 102 ELMHARWAMLAVAGILLPEWFESLGLIQ--NFSWY-------DAGSREYFAD--PTTLLV 150
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
A +A + V G + + N +D++ KL +PGG FDP+ + P+
Sbjct: 151 AQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAMADVGYPGGFWFDPMMWGRGSPEPV 210
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGNA 183
+L+ KEIKNGRLAM A +G + QA TG+GP+ENLA H++DP N+ + S +
Sbjct: 211 MVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGS 266
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
FDPLGL DP+ E+ + R AM A+ G L + G ++N + +
Sbjct: 83 FDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWY 134
>gi|149392118|gb|ABR25925.1| chloroplast chlorophyll a-b binding protein [Oryza sativa Indica
Group]
Length = 171
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 91/175 (52%), Gaps = 27/175 (15%)
Query: 27 ARWAMLGAAGFIIPEAFNKFGANCGPEAV-WFKTGALLLDGNTLNYFGKNIPINLVFAVI 85
R AM+G G + PE K G A+ WF+TG + G T Y+ P L +
Sbjct: 1 GRTAMMGVVGMVAPELLGKLGLVPAETAIPWFQTGVIPPAG-TYTYWAD--PYTLF---V 54
Query: 86 AEIVLVGGAEYYRITNG-----------LDLEDKL-------HPGGP-FDPLGLA-KDPD 125
E+ LVG AE+ R + L LE L +PGGP F+PLG K
Sbjct: 55 FELALVGFAEHRRFQDWYTPGSMGKQYFLGLEKYLAGSGEPAYPGGPLFNPLGFGTKSEA 114
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ LK+KEIKNGRLAM A LGF +QA TG GPV+NL HL+DP NN+LT +
Sbjct: 115 EMKELKLKEIKNGRLAMLAFLGFSVQALFTGVGPVQNLLDHLADPVHNNILTSLK 169
>gi|296085004|emb|CBI28419.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 76/152 (50%), Gaps = 53/152 (34%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E+IH RWAMLGA G + PE +K G FG+ + I ++
Sbjct: 62 EVIHCRWAMLGALGCVFPEILSKNGVK----------------------FGEAVCILAIW 99
Query: 83 AVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAM 142
A ++VL+G E YR+ LKVKEIKNGRLAM
Sbjct: 100 A--CQVVLMGFVEGYRVE-----------------------------LKVKEIKNGRLAM 128
Query: 143 FAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
F+M GFF+QA VTG+GP+ENL HL+DP ANN
Sbjct: 129 FSMFGFFVQAIVTGKGPIENLVDHLADPVANN 160
>gi|116779438|gb|ABK21282.1| unknown [Picea sitchensis]
gi|116782291|gb|ABK22450.1| unknown [Picea sitchensis]
gi|116784092|gb|ABK23211.1| unknown [Picea sitchensis]
gi|116786476|gb|ABK24121.1| unknown [Picea sitchensis]
gi|116791795|gb|ABK26112.1| unknown [Picea sitchensis]
gi|116791985|gb|ABK26188.1| unknown [Picea sitchensis]
gi|116792462|gb|ABK26376.1| unknown [Picea sitchensis]
gi|148908663|gb|ABR17439.1| unknown [Picea sitchensis]
gi|224284338|gb|ACN39904.1| unknown [Picea sitchensis]
gi|224284452|gb|ACN39960.1| unknown [Picea sitchensis]
gi|224284659|gb|ACN40062.1| unknown [Picea sitchensis]
gi|224284741|gb|ACN40101.1| unknown [Picea sitchensis]
gi|224285484|gb|ACN40463.1| unknown [Picea sitchensis]
Length = 278
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G YF + +V
Sbjct: 115 ELVHCRWAMLGAAGIFIPELLTKLGILNTPS--WYTAG-------EQEYFTDKTTLFVV- 164
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
E++ +G AE R N L D +PGG FDPLG P
Sbjct: 165 ----EMIFLGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 220
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG GP++NL HL+DP
Sbjct: 221 EKIKELRTKEIKNGRLAMLAVMGAWFQAEYTGTGPIDNLLAHLADP 266
>gi|732534|gb|AAB40979.1| light harvesting complex a [Volvox carteri]
Length = 264
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 85/174 (48%), Gaps = 30/174 (17%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL+HAR+AML AG ++PE G + W G D YF P
Sbjct: 96 YAQAELVHARFAMLAVAGILVPELLTNIGFS------WPGAGVAWYDAGKFQYFA---PA 146
Query: 79 NLVFAVIAEIVLVGGAEYYR----ITNGLDLEDKL-------------HPGGPFDPLGLA 121
+ +F V +++L AE R + G +D + +PGG FDP G +
Sbjct: 147 SSLFGV--QMLLFAWAELRRYQDFVKPGSANQDPIFSNNKLPDGNEPGYPGGIFDPFGWS 204
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
K LK KEIKNGRLAM A GF QAY TG P++NLA HL+DP+A +
Sbjct: 205 KG--DMKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTPLKNLATHLADPWATTV 256
>gi|302831910|ref|XP_002947520.1| light harvesting complex A [Volvox carteri f. nagariensis]
gi|300267384|gb|EFJ51568.1| light harvesting complex A [Volvox carteri f. nagariensis]
Length = 264
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 85/174 (48%), Gaps = 30/174 (17%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL+HAR+AML AG ++PE G + W G D YF P
Sbjct: 96 YAQAELVHARFAMLAVAGILVPELLTNIGFS------WPGAGVAWYDAGKFQYFA---PA 146
Query: 79 NLVFAVIAEIVLVGGAEYYR----ITNGLDLEDKL-------------HPGGPFDPLGLA 121
+ +F V +++L AE R + G +D + +PGG FDP G +
Sbjct: 147 SSLFGV--QMLLFAWAELRRYQDFVKPGSANQDPIFSNNKLPDGNEPGYPGGIFDPFGWS 204
Query: 122 KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
K LK KEIKNGRLAM A GF QAY TG P++NLA HL+DP+A +
Sbjct: 205 KG--DMKSLKTKEIKNGRLAMLAFAGFAAQAYTTGTTPLKNLATHLADPWATTV 256
>gi|307103837|gb|EFN52094.1| hypothetical protein CHLNCDRAFT_32710 [Chlorella variabilis]
Length = 264
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 26/173 (15%)
Query: 17 SIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNI 76
+ Y+ EL +ARWAMLG AG + E N PE W+ G + N ++ G +
Sbjct: 72 TWYRQAELQNARWAMLGVAGILGQEIIN-------PEQWWYSAG---MPENLPSFDGNKV 121
Query: 77 PINLVFA---VIAEIVLVGGAEYYRITNGLDLE-----------DKLHPGGPFDPLGLAK 122
+ + A ++ V V + R + ++ + + +PGGPFDPLG +K
Sbjct: 122 NMGGILAWEFLLMHFVEVRRWQDIRKKDSVNADPFNPNLKVPNPEMGYPGGPFDPLGFSK 181
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
F ++ KEIKNGRLAM A + F +QA TG+GP+ NL HL+ PF+NN+
Sbjct: 182 G--NFKEVQTKEIKNGRLAMVAFVAFTIQAQATGKGPLANLTDHLASPFSNNV 232
>gi|602359|emb|CAA57492.1| Type II chlorophyll a/b binding protein from photosystem I [Pisum
sativum]
Length = 269
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 106 ELVHSRWAMLGAAGIFIPEFLTKLGILNTPS--WYTAGEQEYFTDTTTLF---------- 153
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGL-AKDP 124
I E+V +G AE R N L D +PGG FDPLG + P
Sbjct: 154 --IVELVFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASP 211
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 212 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|303324979|pdb|3LW5|2 Chain 2, Improved Model Of Plant Photosystem I
Length = 176
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 13 ELVHSRWAMLGAAGIFIPEFLTKLGILNTPS--WYTAGEQEYFTDTTTLF---------- 60
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGL-AKDP 124
I E+V +G AE R N L D +PGG FDPLG + P
Sbjct: 61 --IVELVFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASP 118
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 119 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 164
>gi|115766|sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
AltName: Full=LHCI type II CAB; Flags: Precursor
gi|169214|gb|AAA33711.1| chlorophyll binding protein precursor [Petunia x hybrida]
gi|226259|prf||1503272A chlorophyll binding protein
Length = 270
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 107 ELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS--WYTAGEQEYFTDTTTLF---------- 154
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
+ E+VL+G AE R N L D +PGG FDPLG P
Sbjct: 155 --VIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 213 AKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|308813724|ref|XP_003084168.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029295|gb|AAY27546.1| chloroplast light-harvesting complex I protein precursor Lhca3
[Ostreococcus tauri]
gi|116056051|emb|CAL58584.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 272
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEA---VWFKTGALLLDGNTLNYFGKNIPIN 79
ELIH RWAMLG AG + PE G P+ VWFK G + G T +Y+ I
Sbjct: 96 ELIHGRWAMLGVAGMVAPEVLGGMGII--PQETGLVWFKAGMIPAQG-TYDYWASPFTIF 152
Query: 80 LVFAVIAEIVLVGGAEYYRITNGLDLED-------------KLHPGGPFDPLGLAKDPDQ 126
+ A + I + A+ Y + +D +PGG F+ + +
Sbjct: 153 WINAFLMNIAELRRAQDYWNPGSMGKQDFAGLEKMLGGSGDPAYPGGFFN--FMKQGEKD 210
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
A +K KEIKNGRLAM A G QA +TGEGPV+NL H+ DPF +NLL S
Sbjct: 211 MAAMKTKEIKNGRLAMMACFGCGAQACMTGEGPVKNLVDHVIDPFGHNLLVNFS 264
>gi|118487538|gb|ABK95596.1| unknown [Populus trichocarpa]
Length = 269
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 106 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF---------- 153
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 154 --IVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 211
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 212 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|356559462|ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
gi|255645717|gb|ACU23352.1| unknown [Glycine max]
Length = 270
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 107 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF---------- 154
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 155 --IVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 213 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|117663141|gb|ABK55743.1| chloroplast type III LHCII CAB precursor protein [Cucumis sativus]
Length = 84
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 61/81 (75%), Gaps = 5/81 (6%)
Query: 94 AEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFF 149
E +RI NGLD + L+PGG FDPLGLA DP FA LKVKEIKNGRLAMF+M GFF
Sbjct: 5 VEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFF 63
Query: 150 LQAYVTGEGPVENLAKHLSDP 170
+QA VTG+GP+ENL HL DP
Sbjct: 64 VQAIVTGKGPLENLLDHLDDP 84
>gi|302806497|ref|XP_002984998.1| light-harvesting complex [Selaginella moellendorffii]
gi|300147208|gb|EFJ13873.1| light-harvesting complex [Selaginella moellendorffii]
Length = 268
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E++H+RWAMLGAAG IPEA K G P W+ G YF +
Sbjct: 105 EIVHSRWAMLGAAGIFIPEALTKLGILNTP--FWYTAGEQ-------EYFTDQTTL---- 151
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R N L D +PGG FDP G P
Sbjct: 152 -FIVEMILLGWAEGRRWADILKPGSVNTDPVFPNNKLTGTDVGYPGGFWFDPFGWGTASP 210
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG P++NL HL+DP
Sbjct: 211 EKLKELRTKEIKNGRLAMLAVMGAWFQAVYTGARPIDNLLAHLADP 256
>gi|255538312|ref|XP_002510221.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223550922|gb|EEF52408.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 269
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 16/177 (9%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+HAR+AMLG AG + + G P VW++ GA+ + +
Sbjct: 94 SLKWYVQAELVHARFAMLGIAGILFTDLLRVTGIRKLP--VWYEAGAVKYEFASTRTL-- 149
Query: 75 NIPINLVFAVIAEI-----VLVGGAE-----YYRITNGLDLEDKLHPGGPF-DPLGLAKD 123
+ + L++ AE + G++ ++ + L+ + +PGGP +P GLAKD
Sbjct: 150 -LVVQLLWMGYAETRRYMDYVSPGSQNKEGSFFGMEAALEGLEPGYPGGPLLNPFGLAKD 208
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K+KEIKNGRLAM AMLG F+QA VT GP++NL +HLSDP+ ++ +S
Sbjct: 209 IRSARDWKLKEIKNGRLAMVAMLGIFVQAAVTHTGPIDNLLEHLSDPWHKTIIQTLS 265
>gi|356559464|ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 118 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF---------- 165
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 166 --IVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 223
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 224 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 269
>gi|255070349|ref|XP_002507256.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226522531|gb|ACO68514.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
Length = 254
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 87/173 (50%), Gaps = 29/173 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 84 EIIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 135
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGL------DLEDKLHPGGPFDPLGLAKDP 124
+AV+A EI LVG AE YR GL +LE + PGG FDPLG A+
Sbjct: 136 APEGSGYPSFWAVLAIEIFLVGSAECYR--TGLFENPFPELELSVTPGGRFDPLGFAEAG 193
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LKVKE+K+ RL+MFA LG QA T EGP+ N H++DP N+LT
Sbjct: 194 D-LEELKVKELKHCRLSMFAWLGCIFQALATQEGPIANWQAHVADPVHANVLT 245
>gi|255571917|ref|XP_002526901.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223533800|gb|EEF35532.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 282
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 87/147 (59%), Gaps = 12/147 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ E+IH RWAMLG G + EA W G + L++G++ Y G+ +P
Sbjct: 143 FRECEVIHGRWAMLGTLGALAVEALTG--------VAWQDAGKVELVEGSS--YLGQPLP 192
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKN 137
+L + E++++G E+ R LD E +++PGG FDPLGLA DP++ L++ EIK+
Sbjct: 193 FSLTTLIWIEVLVIGYIEFQRNAE-LDPEKRIYPGGYFDPLGLASDPEKKENLQLAEIKH 251
Query: 138 GRLAMFAMLGFFLQAYVTGEGPVENLA 164
RLAM A L F +QA TG+GP+ +A
Sbjct: 252 SRLAMVAFLIFGIQAAFTGKGPIAFVA 278
>gi|302808989|ref|XP_002986188.1| light-harvesting complex [Selaginella moellendorffii]
gi|300146047|gb|EFJ12719.1| light-harvesting complex [Selaginella moellendorffii]
Length = 268
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 82/166 (49%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
E++H+RWAMLGAAG IPEA K G P W+ G YF +
Sbjct: 105 EIVHSRWAMLGAAGIFIPEALTKLGILNTP--FWYTAGEQ-------EYFTDQTTL---- 151
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++L+G AE R N L D +PGG FDP G P
Sbjct: 152 -FIVEMILLGWAEGRRWADILKPGSVNTDPVFPNNKLTGTDVGYPGGFWFDPFGWGTASP 210
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + QA TG P++NL HL+DP
Sbjct: 211 EKLKELRTKEIKNGRLAMLAVMGAWFQAVYTGARPIDNLLAHLADP 256
>gi|145355794|ref|XP_001422134.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
gi|144582374|gb|ABP00451.1| photosystem I light harvesting complex, chlorophyll a/b binding
[Ostreococcus lucimarinus CCE9901]
Length = 281
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 87/171 (50%), Gaps = 21/171 (12%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEA---VWFKTGALLLDGNTLNYFGKNIPIN 79
E+IH RWAMLG AG + PE G P+ VW+K G + G T +Y+ I
Sbjct: 105 EVIHGRWAMLGVAGMVAPEVLGGLGII--PQETGLVWYKAGMIPAQG-TYDYWANPFTIF 161
Query: 80 LVFAVIAEIVLVGGAEYYRITNGLDLEDKL-------------HPGGPFDPLGLAKDPDQ 126
+ A + + A+ Y + ++ + +PGG F+ +G K
Sbjct: 162 WINAALMNFAELRRAQDYWNPGSMGKQELIGWEKMLGGSGEPAYPGGFFNIMGQGKS--D 219
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
A ++VKEIKNGRLAM A QA +TGEGPV+NL H+SDPF +NLL
Sbjct: 220 MAKMRVKEIKNGRLAMMACFACGAQAVMTGEGPVKNLIDHVSDPFGHNLLV 270
>gi|268612159|pdb|2WSC|2 Chain 2, Improved Model Of Plant Photosystem I
gi|268612177|pdb|2WSE|2 Chain 2, Improved Model Of Plant Photosystem I
gi|268612195|pdb|2WSF|2 Chain 2, Improved Model Of Plant Photosystem I
Length = 269
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 83/170 (48%), Gaps = 33/170 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 106 ELVHSRWAMLGAAGIFIPEFLTKLGILNTPS--WYTAGEQEYFTDTTTLF---------- 153
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGL-AKDP 124
I E+V +G AE R N L D +PGG FDPLG + P
Sbjct: 154 --IVELVFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASP 211
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL-AKHLSDPFAN 173
+ L+ KEIKNGRLAM A++G + Q TG GP++NL A HL+DP A
Sbjct: 212 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAAHLADPHAT 261
>gi|224137478|ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
gi|222835451|gb|EEE73886.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
Length = 266
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 32/187 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+HAR+AM G AG + + G P VW++ GA+ + +
Sbjct: 91 SLKWYVQAELVHARFAMAGVAGILFTDLLRVTGIRKLP--VWYEAGAVKFEFASTRTL-- 146
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITNGLD------------LEDKL------HPGGPF- 115
++ +++L+G AE R + + LE L +PGGP
Sbjct: 147 ---------IVVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLESALEGLEPGYPGGPLL 197
Query: 116 DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
+PLGLA+D + + K+KEIKNGRLAM AM+G F+QA VT GP++NL +HLS+P+ +
Sbjct: 198 NPLGLARDIENAHVWKLKEIKNGRLAMVAMVGIFVQAAVTHAGPIDNLIEHLSNPWHRTI 257
Query: 176 LTVISGN 182
+ ++ +
Sbjct: 258 IQTLANS 264
>gi|356520200|ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 2 [Glycine max]
Length = 281
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 118 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF---------- 165
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
+ E+ +G AE R N L D +PGG FDPLG P
Sbjct: 166 --VVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 223
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 224 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 269
>gi|356520198|ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
Length = 270
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 107 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGELEYFTDTTTLF---------- 154
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
+ E+ +G AE R N L D +PGG FDPLG P
Sbjct: 155 --VVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 213 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
>gi|145079153|tpg|DAA05901.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca6 [Acetabularia acetabulum]
Length = 201
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 30/167 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAM+G AG ++P K GA P VWF+ G + D ++ +P + +
Sbjct: 41 ELMHCRWAMMGVAGILVPALLTKLGAMNVP--VWFEAGKVANDNSS-------VPFSALL 91
Query: 83 AVIAEIVLVGGAEYYR-----------------ITNGLDLEDKLHPGGPF-DPLGLAKDP 124
V E + +G E R IT+ + +PGG F DP G +K
Sbjct: 92 MV--EFLAMGFVETKRWYDIKSPGSQGDGSIFGITDDFKGKSVGYPGGTFFDPFGFSKGS 149
Query: 125 DQ-FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ + L+VKEI NGRLAM AM+GF+ Q TG+GPV+NL H++DP
Sbjct: 150 EESYKTLQVKEIANGRLAMVAMVGFWAQYAATGKGPVDNLFDHIADP 196
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVT 155
FDPL L DPD A ++ E+ + R AM + G + A +T
Sbjct: 22 FDPLSLGSDPDMLAWMRQAELMHCRWAMMGVAGILVPALLT 62
>gi|302848571|ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
gi|300258785|gb|EFJ43018.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
Length = 257
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 41/182 (22%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIP- 77
Y+ EL+HARWAMLG AG ++ E P+ +++ G +N+P
Sbjct: 70 YRQSELVHARWAMLGVAGVLVQEVVK-------PDVYFYEAG-----------LPQNLPE 111
Query: 78 ----INLVFAVIAEIVLVGGAEYYRITN----GLDLEDKL------------HPGGPFDP 117
+N+ + E +L+ E R + G ED + +PGG FDP
Sbjct: 112 PFTNVNMGGLLAWEFILMHWVEVRRWQDYKNFGSVNEDPIFKGNKVPNPEMGYPGGIFDP 171
Query: 118 LGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LG +K L+ KEIKNGRLAM A +GF LQA TG+GP+ L+ HLS+PF NN+L
Sbjct: 172 LGFSKG--NLKELQTKEIKNGRLAMVAYMGFVLQAQATGKGPLAALSAHLSNPFGNNILK 229
Query: 178 VI 179
I
Sbjct: 230 NI 231
>gi|118487549|gb|ABK95601.1| unknown [Populus trichocarpa]
Length = 269
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G + +T F
Sbjct: 106 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYSAGEVEYFTDTTTLF---------- 153
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 154 --IVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 211
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 212 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|224072580|ref|XP_002303791.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
gi|222841223|gb|EEE78770.1| light-harvesting complex I protein Lhca2 [Populus trichocarpa]
Length = 269
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 80/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G + +T F
Sbjct: 106 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYSAGEVEYFTDTTTLF---------- 153
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 154 --IVELFFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 211
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
++ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 212 EKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|356508545|ref|XP_003523016.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Glycine max]
Length = 252
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 28/176 (15%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL++ RWAMLG AG ++PE F KFG P+ W+ D YF + +
Sbjct: 91 YVQAELVNGRWAMLGVAGMLLPEVFTKFGIINAPQ--WY-------DAGKSEYFASSSTL 141
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPD 125
++ ++ V + + I N G +D + +PG F+PL A +
Sbjct: 142 FVIEFILFHYVEI--RRWQDIKNPGCVNQDPIFKQYSLPPHECGYPGSVFNPLNFAPTLE 199
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
K KE+ NGRLAM A LGF +Q VTG+GP ENL +HLSDP+ N ++ I G
Sbjct: 200 A----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSDPWHNTIINTIRG 251
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ NGR AM + G L T G
Sbjct: 76 FDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKFG 119
>gi|218202214|gb|EEC84641.1| hypothetical protein OsI_31519 [Oryza sativa Indica Group]
Length = 264
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAML AAG ++PE K+G F +D +YF P L
Sbjct: 101 ELMHSRWAMLAAAGILVPEVLEKWG---------FMEDYSWIDAGARDYFAD--PWTLF- 148
Query: 83 AVIAEIVLVGGAEYYRITNGLD-----LEDKL-----------HPGG-PFDPLGLAK-DP 124
++++ L+G AE R + L+ +E +L +PGG FD + P
Sbjct: 149 --VSQMALMGWAEGRRWADYLNPGCVAVEPRLPNRRNPVPDVGYPGGLWFDWGNWGRGSP 206
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ +L+ KEIKNGRLAM A +GF+ QA TGEGP++NL HL+DP N+ + + +
Sbjct: 207 EPVMVLRTKEIKNGRLAMLAFVGFWFQAVYTGEGPIDNLLHHLADPGHCNVFSAFTSH 264
>gi|224124190|ref|XP_002330127.1| light-harvesting complex I protein Lhca4 [Populus trichocarpa]
gi|222871261|gb|EEF08392.1| light-harvesting complex I protein Lhca4 [Populus trichocarpa]
Length = 251
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 28/173 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL++ RWAMLG AG ++PE F K G P+ W+ D YF + + ++
Sbjct: 94 ELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ--WY-------DAGKAEYFASSSTLFVIE 144
Query: 83 AVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPDQFAL 129
++ V + + I N G +D + +PGG F+PL A +
Sbjct: 145 FILFHYVEI--RRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIEA--- 199
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
K KE+ NGRLAM A LGF +Q VTG+GP ENL +H+SDP+ N ++ SGN
Sbjct: 200 -KEKELANGRLAMLAFLGFVIQHNVTGKGPFENLLQHISDPWHNTIVQTFSGN 251
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ NGR AM + G L T G
Sbjct: 75 FDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 118
>gi|388515647|gb|AFK45885.1| unknown [Lotus japonicus]
Length = 269
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 106 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEQEYFTDTTTLF---------- 153
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++ +G AE R N L D +PGG FDPLG P
Sbjct: 154 --IVELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 211
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 212 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 257
>gi|449466336|ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
gi|449522610|ref|XP_004168319.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
[Cucumis sativus]
Length = 259
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 34/189 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD-GNTLNYFG 73
S Y EL+H R+AMLG +G ++ + G + P VW+ GA+ N F
Sbjct: 84 SLKWYVQAELVHCRFAMLGVSGVLLTDLLRVTGISELP--VWYNAGAVEYGFANKRTLF- 140
Query: 74 KNIPINLVFAVIAEIVLVGGAEYYRITN--------------GLDLEDK----LHPGGP- 114
I +++L+G E R + GL+ K +PGGP
Sbjct: 141 -----------IVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPL 189
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 174
+PLG+AKD K+KEIKNGRLAM AMLG F+QAYVT GP++NL +HLS+P+
Sbjct: 190 LNPLGIAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKT 249
Query: 175 LLTVISGNA 183
++ +S ++
Sbjct: 250 IIQTLSSSS 258
>gi|255550389|ref|XP_002516245.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223544731|gb|EEF46247.1| chlorophyll A/B binding protein, putative [Ricinus communis]
Length = 297
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 86/178 (48%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAML AG +IPE G F D YF P L
Sbjct: 134 ELMHSRWAMLAVAGILIPEWLESLG---------FIENYNWFDAGAREYFAD--PTTLF- 181
Query: 83 AVIAEIVLVGGAEYYRITN-----GLDLEDKL-----------HPGG-PFDPLGLAK-DP 124
I ++VL+G E R + +D+E L +PGG FDPL + P
Sbjct: 182 --IVQLVLMGWVEGRRWADMIKPGCVDIEPTLPNKTKPKPDVGYPGGLWFDPLMWGRGSP 239
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ +L+ KEIKNGRLAM A +GF QA TGEGP+ENL H++DP N+ + +
Sbjct: 240 EPVMVLRTKEIKNGRLAMLAFVGFCFQAVYTGEGPIENLMAHIADPGHCNIFSAFTSQ 297
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVEN 162
FDPLGL DP+ E+ + R AM A+ G + ++ G +EN
Sbjct: 115 FDPLGLGSDPELLKWFAQAELMHSRWAMLAVAGILIPEWLESLGFIEN 162
>gi|303277087|ref|XP_003057837.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226460494|gb|EEH57788.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 237
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 22 YELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL-NYFGKNIPINL 80
YE+IH RWAML G + E W+ TGAL + L NY P L
Sbjct: 69 YEVIHGRWAMLAIPGIVAQEQATGV--------PWYDTGALCTPASCLENYSFPGAPAPL 120
Query: 81 V---------FAVIA-EIVLVGGAEYYR-----ITNGLDLEDKLHPGGPFDPLGLAKDPD 125
+AV+A E+V VG AE YR G E L+PGG FDPLG A+ D
Sbjct: 121 APEGSGAPYFWAVLAFEVVAVGLAEAYRGGIVSPPKGFP-EPSLYPGGRFDPLGFAEKGD 179
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFAN 173
LK++E+K+ RLAM A LG +Q TG GPV NL H+SDP N
Sbjct: 180 -LEKLKLQELKHCRLAMGAFLGCLVQKEFTGVGPVANLTSHISDPTHN 226
>gi|149242541|pdb|2O01|2 Chain 2, The Structure Of A Plant Photosystem I Supercomplex At 3.4
Angstrom Resolution
Length = 186
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 33 ELVHSRWAMLGAAGIFIPEFLTKLGILNTPS--WYTAGEQEYFTDTTTLF---------- 80
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGL-AKDP 124
I E+V +G AE R N L D +PGG FDPLG + P
Sbjct: 81 --IVELVFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSASP 138
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 139 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 184
>gi|303283632|ref|XP_003061107.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226457458|gb|EEH54757.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 232
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 87/172 (50%), Gaps = 26/172 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 61 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 112
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLDLEDKL-----HPGGPFDPLGLAKDPD 125
+AV+A E+VLVG AE YR + D+L PGG FDPLGLA+ D
Sbjct: 113 APEGSGYPSFWAVLAIEVVLVGLAEAYRTGLSDPVFDELTVGDVSPGGRFDPLGLAESGD 172
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+K+ RL+MFA LG +Q T EGP+ N H++DP N+LT
Sbjct: 173 -LEELKIKELKHCRLSMFAWLGCIMQGLATQEGPIANWQAHVADPVHANVLT 223
>gi|358346569|ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503274|gb|AES84477.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 268
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 105 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEQEYFTDTTTLF---------- 152
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++ +G AE R N L D +PGG FDPLG P
Sbjct: 153 --IVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 210
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 211 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 256
>gi|358346846|ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503410|gb|AES84613.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 294
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 131 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEQEYFTDTTTLF---------- 178
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++ +G AE R N L D +PGG FDPLG P
Sbjct: 179 --IVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 236
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 237 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 282
>gi|424513454|emb|CCO66076.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 231
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWA LG G + A G WF G L + + G P+
Sbjct: 59 EIIHGRWAQLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 110
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI---TNGLD---LEDKLHPGGPFDPLGLAKDP 124
+ +I E +LVGGAE YR N D + + PGG FDPLGLA+
Sbjct: 111 APEGSGYPSFWNVLIIETILVGGAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESG 170
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG +QA T EGP+ N H +DP N+LT
Sbjct: 171 D-LEELKIKELKHCRLSMFAWLGCIMQALATQEGPIANWTAHTADPVHANVLT 222
>gi|356530445|ref|XP_003533791.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 86/173 (49%), Gaps = 26/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAML G ++PE + G + D T YF P L
Sbjct: 98 ELMHSRWAMLAVFGILVPELLERIG---------YIENFSWYDAGTREYFVD--PTTLFV 146
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
+ + V G + I N +D+E K+ +PGG FDP+ + P+
Sbjct: 147 VQMGLMGWVEGRRWADIVNPGSVDIEPKVPHVTNPKPDVGYPGGLWFDPMMWGRGSPEPV 206
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+L+ KEIKNGRLAM A +GF+ QA TGEGP+ENL HL+DP N+ + +
Sbjct: 207 MVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFT 259
>gi|255071911|ref|XP_002499630.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|255071913|ref|XP_002499631.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|255072873|ref|XP_002500111.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|255080166|ref|XP_002503663.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226514892|gb|ACO60888.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226514893|gb|ACO60889.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226515373|gb|ACO61369.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|226518930|gb|ACO64921.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
Length = 231
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 87/172 (50%), Gaps = 26/172 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 60 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 111
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLDLEDKL-----HPGGPFDPLGLAKDPD 125
+AV+A E+VLVG AE YR + D+L PGG FDPLGLA+ D
Sbjct: 112 APEGSGYPSFWAVLAIEVVLVGLAEAYRTGLSDPVFDELTVGDVSPGGRFDPLGLAESGD 171
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+K+ RL+MFA LG +Q T EGP+ N H++DP N+LT
Sbjct: 172 -LEELKIKELKHCRLSMFAWLGCIMQGLATQEGPIANWQAHVADPVHANVLT 222
>gi|159474444|ref|XP_001695335.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
gi|158275818|gb|EDP01593.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii]
Length = 239
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
+ S + E+IH RWAMLG AG + E +G W+ ++G
Sbjct: 66 KEPASLKRFTESEVIHGRWAMLGVAGSLAVELLG-YGN-------WYDAPLWAVNGGKAT 117
Query: 71 YFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALL 130
+FG +P +L + E V + AE R D ++PGG FDPLG AKD + L
Sbjct: 118 WFGIEVPFDLNALLAFEFVAMAAAEGQRG----DAGGVVYPGGAFDPLGFAKDSSKSGEL 173
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAK 165
K+KEIKNGRLAM A LGF Q TG+GP+ A
Sbjct: 174 KLKEIKNGRLAMVAFLGFVAQHAATGKGPIAAWAS 208
>gi|388510254|gb|AFK43193.1| unknown [Lotus japonicus]
Length = 213
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 32/188 (17%)
Query: 15 SASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 74
S Y EL+HAR+AMLG G ++ + G + P VWF+ GA+ K
Sbjct: 38 SLRWYVQAELVHARFAMLGVFGILVTDLLRVTGLSKIP--VWFEAGAV-----------K 84
Query: 75 NIPINLVFAVIAEIVLVGGAEYYRITN--------------GLDLE----DKLHPGGPF- 115
N +I +++L+G AE R + GL+ + +PGGP
Sbjct: 85 YEFTNTQTLIIVQLLLMGFAETKRYMDFISPGSQAKEGSFFGLEASFEGLEPGYPGGPLL 144
Query: 116 DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNL 175
+PLGLAKD K+KEIKNGRLAM A+LG F+QA VT GP++NL +HLS+P+ +
Sbjct: 145 NPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTV 204
Query: 176 LTVISGNA 183
+ ++ +
Sbjct: 205 IQTLASSG 212
>gi|357450129|ref|XP_003595341.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355484389|gb|AES65592.1| Chlorophyll a-b binding protein [Medicago truncatula]
Length = 267
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+HARWAMLG +G +IPE K G W+ G ++ YF P L
Sbjct: 104 ELMHARWAMLGVSGILIPEILEKIGYVK--NFSWYNAG-------SVEYFAD--PTTLFI 152
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
+A + V G + I N +D+E KL +PGG FDP+ + P+
Sbjct: 153 VQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPV 212
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+L+ KEIKNGRLAM A LGF QA G P++NL HL+DP N+ + +
Sbjct: 213 MVLRTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADPGHVNIFSAFT 265
>gi|145078729|tpg|DAA05882.1| TPA_inf: chloroplast light-harvesting complex II protein precursor
Lhcbm3 [Euglena gracilis]
Length = 244
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%)
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
D ++PG FDPLGL+KD FA LKVKE+KNGRLAM MLG F+Q + TG+GP++NLA H
Sbjct: 9 DLVYPGKAFDPLGLSKDETAFAELKVKEVKNGRLAMLGMLGLFMQGFATGKGPLQNLADH 68
Query: 167 LSDPFANNLLT 177
L+DP N++T
Sbjct: 69 LADPTGANIIT 79
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
Q T Y+ E+I+ RWAMLG G I+PE + PE VWFKTGA + LN
Sbjct: 141 TQPTRLERYRQGEIINGRWAMLGIVGCIVPELLARNYGVPFPEPVWFKTGATVFSEEGLN 200
Query: 71 YFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNG 102
Y G I+ + ++ EI+ VG AE +R++ G
Sbjct: 201 YLGNPSLIHAKSIAAILVTEILFVGAAEAFRVSGG 235
>gi|388495628|gb|AFK35880.1| unknown [Medicago truncatula]
Length = 268
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 79/166 (47%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G +T F
Sbjct: 105 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEQEYFTDTTTLF---------- 152
Query: 83 AVIAEIVLVGGAEYYRI----------------TNGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E++ +G AE R N L D +PGG FDPLG P
Sbjct: 153 --IVELIFIGWAEGRRWADILNPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 210
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 211 QKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 256
>gi|388518909|gb|AFK47516.1| unknown [Lotus japonicus]
Length = 266
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 32/185 (17%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL+HAR+AMLG G ++ + G + P VWF+ GA+ +
Sbjct: 95 YVQAELVHARFAMLGVFGILVTDLLRVTGLSKIP--VWFEAGAVKYEFT----------- 141
Query: 79 NLVFAVIAEIVLVGGAEYYRITN--------------GLDLE----DKLHPGGPF-DPLG 119
N +I +++L+G AE R + GL+ + +PGGP +PLG
Sbjct: 142 NTQTLIIVQLLLMGFAETKRYMDFIGPGSQAKEGSFFGLEASFEGLEPGYPGGPLLNPLG 201
Query: 120 LAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVI 179
LAKD K+KEIKNGRLAM A+LG F+QA VT GP++NL +HLS+P+ ++ +
Sbjct: 202 LAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTVIQTL 261
Query: 180 SGNAE 184
+ +
Sbjct: 262 ASSGS 266
>gi|145079882|tpg|DAA05946.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca1 [Micromonas sp. CCMP490]
Length = 223
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
+Q E+IH+RWAMLG AG EA W + A + D T Y G P
Sbjct: 75 FQEAEIIHSRWAMLGVAGAAGQEAITGV--------TWIE--APVQDSQT--YLGAESPF 122
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
L V E+ ++ E R +N D +L+PGG FDP G +K D F LK KEI NG
Sbjct: 123 PLPVVVAIEVFVMAFVEQQR-SNEKDPAKRLYPGGAFDPAGFSKGAD-FETLKKKEIANG 180
Query: 139 RLAMFAMLGFFLQAYVTG-EGPVENLAKHLSDPFANN 174
R+AM A G QA T EGP+ L +H++DP+ N
Sbjct: 181 RVAMLAFAGLIGQAQATNLEGPLSALGRHVADPWHVN 217
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTG----EGPVENLAKHL--S 168
FDPLGL K+P A + EI + R AM + G Q +TG E PV++ +L
Sbjct: 60 FDPLGLGKEPANLARFQEAEIIHSRWAMLGVAGAAGQEAITGVTWIEAPVQDSQTYLGAE 119
Query: 169 DPF 171
PF
Sbjct: 120 SPF 122
>gi|168040609|ref|XP_001772786.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168040679|ref|XP_001772821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675863|gb|EDQ62353.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675898|gb|EDQ62388.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + EAF W G + L+DG + YFG +P
Sbjct: 143 FRECELIHGRWAMLAILGALSVEAFTG--------VTWQDAGKVELVDGAS--YFGLPLP 192
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ V E LVG E+ R LD E +L+PGG F DPL A D+ LK+ EIK
Sbjct: 193 FSITSLVYIEAFLVGFIEFQRNAE-LDPEKRLYPGGKFFDPLNFADTEDKKETLKLAEIK 251
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF QA TG+GP++N A HL+DP + S
Sbjct: 252 HARLAMVAALGFAAQAAATGKGPLDNWATHLADPLHTTIFDTFS 295
>gi|303271155|ref|XP_003054939.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|303272221|ref|XP_003055472.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
pusilla CCMP1545]
gi|303277051|ref|XP_003057819.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|303277801|ref|XP_003058194.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226460476|gb|EEH57770.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226460851|gb|EEH58145.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226462913|gb|EEH60191.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226463446|gb|EEH60724.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
pusilla CCMP1545]
Length = 231
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 85/172 (49%), Gaps = 26/172 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 60 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 111
Query: 79 --------NLVFAVIAEIVLVGGAEYYRITNGLDLEDKL-----HPGGPFDPLGLAKDPD 125
+ +I E+VLVG AE YR + D+L PGG FDPLGLA+ D
Sbjct: 112 APEGSGYPSFWNVLIIEVVLVGLAEAYRTGLSDPVFDELTVGDVSPGGRFDPLGLAESGD 171
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+K+ RL+MFA LG +Q T EGP+ N H++DP N+LT
Sbjct: 172 -LEELKIKELKHCRLSMFAWLGCIMQGLATQEGPIANWQAHVADPVHANVLT 222
>gi|302851787|ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
gi|300257220|gb|EFJ41471.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis]
Length = 241
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 41/186 (22%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCG---PEAVWFKTGALLLDGNTLNYFGKN 75
Y EL+H R+AMLGAAG I+ GA G PE W+ G ++++ N +++
Sbjct: 68 YVQAELVHGRFAMLGAAGIIL----TSIGAKVGLGFPE--WYDAGKVVVEKNNIDF---- 117
Query: 76 IPINLVFAVIAEIVLVGGAE---YYRITNG--------LDLEDKL------HPGGPF-DP 117
P L I ++ L+G AE +Y N L D+ +PGG F DP
Sbjct: 118 -PTLL----ITQLYLMGWAETKRWYDFKNPGSQGDGSFLGFTDEFKGLENGYPGGRFFDP 172
Query: 118 LGLAK-DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP----FA 172
+GL++ D D++ K KEIKNGRLAM A LGF Q TG+GP++NLA HL+DP FA
Sbjct: 173 MGLSRGDADKYKEYKQKEIKNGRLAMIACLGFAAQYAATGKGPLDNLADHLADPNHVNFA 232
Query: 173 NNLLTV 178
N +++
Sbjct: 233 TNGVSI 238
>gi|323388125|gb|ADX60322.1| chlorophyll a-b binding protein of LHCII [Furcellaria lumbricalis]
Length = 86
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 107 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKH 166
D L+PG FDPLGLA DPD FA LK KEIKNGRLA F+M G+F+QA TG+GPV+N ++H
Sbjct: 4 DPLYPGEAFDPLGLADDPDTFAELKTKEIKNGRLAQFSMFGYFVQALQTGKGPVQNWSEH 63
Query: 167 LSDPFANN 174
++DP+ N
Sbjct: 64 VADPWNVN 71
>gi|47026888|gb|AAT08668.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 237
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINL 80
E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G +
Sbjct: 85 EVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 143
Query: 81 VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKE 134
+ A+ A ++VL+G E YR+ G ++ D L+PGG FDPLGLA DP FA LKV E
Sbjct: 144 ILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPKAFAELKVNE 200
>gi|412985267|emb|CCO20292.1| unknown [Bathycoccus prasinos]
Length = 277
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 11 NQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN 70
N+ + ++ EL+H+RWAMLG G I EA G W G + L+
Sbjct: 127 NEAFDINRFRECELLHSRWAMLGLVGVIFGEA--------GTGVAWQDAGKVELE--QTQ 176
Query: 71 YFGKNI---PINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLA-KDPDQ 126
Y G N+ NL E++LVG E+YR LD E + +PGG FDPLG A K P++
Sbjct: 177 YLGFNLWGEGSNLAALTAIEVLLVGTLEFYRSAE-LDQEKRCYPGGAFDPLGFASKSPEE 235
Query: 127 FALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 163
LK E+K+GRLAM AM G QA GEG +E L
Sbjct: 236 TFRLKTAELKHGRLAMVAMFGVAQQALNNGEGALEAL 272
>gi|145079798|tpg|DAA05935.1| TPA_inf: chloroplast light-harvesting complex protein precursor
Lhcp2.5 [Micromonas sp. CCMP490]
Length = 231
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 60 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 111
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLDLEDKL-----HPGGPFDPLGLAKDPD 125
+AV+A E+VLVG AE YR D+L PGG FDPLGLA+ D
Sbjct: 112 APEGSGYPSFWAVLAIEVVLVGLAEAYRTGLSDPAFDELTVGDVSPGGRFDPLGLAESGD 171
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+K+ RL+MFA LG +Q T EGP+ N H++DP N+LT
Sbjct: 172 -LEELKIKELKHCRLSMFAWLGCIMQGLATQEGPIANWQAHVADPVHANVLT 222
>gi|412990451|emb|CCO19769.1| unknown [Bathycoccus prasinos]
Length = 241
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 82/174 (47%), Gaps = 29/174 (16%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL HARWAMLG AG PE FG + P W A +G YF + +
Sbjct: 74 YVQAELQHARWAMLGVAGMAAPELLTMFGVSDLPN--WHD--APFYNG----YFASSTTL 125
Query: 79 NLVFAVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGGPFDPLGLAK 122
V ++ ++ AE R N L D +PGG F+P+ K
Sbjct: 126 FTV-----QMFMMNWAEIRRWQDIKNPGSVSEDPAFPGNKLPAGDVGYPGGIFNPMNYGK 180
Query: 123 DPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLL 176
D+ LK KEI NGRLAM A LG F+Q TG GPVENL HLS+P NN+
Sbjct: 181 STDELKALKAKEIANGRLAMVAALGCFIQYDHTGVGPVENLTSHLSNPGVNNVF 234
>gi|424513686|emb|CCO66308.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 231
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWA LG G + A G WF G L + + G P+
Sbjct: 59 EIIHGRWAQLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 110
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI---TNGLD---LEDKLHPGGPFDPLGLAKDP 124
+ +I E +LVGGAE YR N D + + PGG FDPLGLA+
Sbjct: 111 APEGSGYPSFWNVLIIETILVGGAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESG 170
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H +DP N+LT
Sbjct: 171 D-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWTAHTADPVHANVLT 222
>gi|145079780|tpg|DAA05933.1| TPA_inf: chloroplast light-harvesting complex protein precursor
Lhcp2.4 [Micromonas sp. CCMP490]
Length = 231
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 60 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 111
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLDLEDKL-----HPGGPFDPLGLAKDPD 125
+AV+A E+VLVG AE YR D+L PGG FDPLGLA+ D
Sbjct: 112 APEGSGYPSFWAVLAIEVVLVGLAEAYRTGLSDPAFDELTVGDVSPGGRFDPLGLAESGD 171
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+K+ RL+MFA LG +Q T EGP+ N H++DP N+LT
Sbjct: 172 -LEELKIKELKHCRLSMFAWLGCIMQGLATQEGPIANWQAHVADPVHANVLT 222
>gi|255078326|ref|XP_002502743.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|255079024|ref|XP_002503092.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|255080886|ref|XP_002504009.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precuror [Micromonas sp. RCC299]
gi|226518009|gb|ACO64001.1| prasinophyte specific chlorophyll a/b-binding protein [Micromonas
sp. RCC299]
gi|226518358|gb|ACO64350.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas sp. RCC299]
gi|226519276|gb|ACO65267.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precuror [Micromonas sp. RCC299]
Length = 231
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 60 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 111
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLDLEDKL-----HPGGPFDPLGLAKDPD 125
+AV+A E+VLVG AE YR + D+L PGG FDPLGLA+ D
Sbjct: 112 APEGSGYPSFWAVLAIEVVLVGLAEAYRTGLSDPVFDELTVGDVSPGGRFDPLGLAESGD 171
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
LK+KE+K+ RL+MFA LG Q T EGP+ N H++DP N+LT
Sbjct: 172 -LEELKIKELKHCRLSMFAWLGCIFQGLATQEGPIANWQAHVADPVHANVLT 222
>gi|308801082|ref|XP_003075322.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri]
gi|63029299|gb|AAY27548.1| chloroplast light-harvesting complex I protein precursor Lhca1
[Ostreococcus tauri]
gi|116061876|emb|CAL52594.1| PSI-associated light-harvesting chlorophyll a/b binding protein
(IC) [Ostreococcus tauri]
Length = 225
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y+ EL+HARWAM+G AG + G + W D T Y G
Sbjct: 69 YREAELMHARWAMMGVAGAV--------GVEIAGQGDWASAQPTTWDA-TAKYLGNETHA 119
Query: 79 NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNG 138
L + VLV AE R E +L+PGG FDP GL+K D F LK KE+ NG
Sbjct: 120 PLFAVIGVNGVLVAFAESQR--QAATGEARLYPGGSFDPAGLSKGKD-FETLKRKELANG 176
Query: 139 RLAMFAMLGFFL--QAYVTGEGPVENLAKHLSDPFANNLLT 177
R+AM A G QA +G GPV+ LA HL+DP+ N+ T
Sbjct: 177 RVAMMAFFGIMAQHQADPSGPGPVKQLANHLADPWHVNVCT 217
>gi|118489040|gb|ABK96327.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 251
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 89/173 (51%), Gaps = 28/173 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL++ RWAMLG AG ++PE F K G P+ W+ D YF + + ++
Sbjct: 94 ELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ--WY-------DAGKAEYFASSSTLFVIE 144
Query: 83 AVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPDQFAL 129
++ V + + I N G +D + +PGG F+PL A +
Sbjct: 145 FILFHYVEI--RRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTIEA--- 199
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
K KE+ NGRLAM A LGF +Q VTG+GP +NL +H+SDP+ N ++ SGN
Sbjct: 200 -KEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHISDPWHNTIVQTFSGN 251
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ NGR AM + G L T G
Sbjct: 75 FDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 118
>gi|449440798|ref|XP_004138171.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Cucumis sativus]
gi|449477217|ref|XP_004154963.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Cucumis sativus]
Length = 252
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL++ RWAMLG AG ++PE F K G P+ W+ D YF + +
Sbjct: 91 YVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ--WY-------DAGKAEYFASSSTL 141
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPD 125
++ ++ V + + I N G +D + +PGG F+PL A +
Sbjct: 142 FVIEFILFHYVEI--RRWQDIKNPGCVNQDPIFKQYSLPPNECGYPGGIFNPLNFAPTLE 199
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
K KEI NGRLAM A LGF +Q VTG+GP +NL +H+SDP+ N ++ GN
Sbjct: 200 A----KEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIVQTFGGN 252
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ NGR AM + G L T G
Sbjct: 76 FDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIG 119
>gi|115479363|ref|NP_001063275.1| Os09g0439500 [Oryza sativa Japonica Group]
gi|51091350|dbj|BAD36085.1| putative chlorophyll a/b-binding protein type II [Oryza sativa
Japonica Group]
gi|51091400|dbj|BAD36143.1| putative chlorophyll a/b-binding protein type II [Oryza sativa
Japonica Group]
gi|113631508|dbj|BAF25189.1| Os09g0439500 [Oryza sativa Japonica Group]
gi|215695401|dbj|BAG90592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 92/178 (51%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H+RWAML AG ++PE K+G F +D +YF P L
Sbjct: 101 ELMHSRWAMLAVAGILVPEVLEKWG---------FMEDYSWIDAGARDYFAD--PWTLF- 148
Query: 83 AVIAEIVLVGGAEYYRITNGLD-----LEDKL-----------HPGG-PFDPLGLAK-DP 124
++++ L+G AE R + L+ +E +L +PGG FD + P
Sbjct: 149 --VSQMALMGWAEGRRWADYLNPGCVAVEPRLPNRRNPVPDVGYPGGLWFDWGNWGRGSP 206
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ +L+ KEIKNGRLAM A +GF+ QA TGEGP++NL HL+DP N+ + + +
Sbjct: 207 EPVMVLRTKEIKNGRLAMLAFVGFWFQAVYTGEGPIDNLLHHLADPGHCNVFSAFTSH 264
>gi|145079879|tpg|DAA05945.1| TPA_inf: chloroplast light-harvesting complex protein precursor
Lhcp1.1 [Micromonas sp. CCMP490]
Length = 259
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 86/173 (49%), Gaps = 29/173 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 89 EIIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 140
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGL------DLEDKLHPGGPFDPLGLAKDP 124
+AV+A EI LVG AE YR GL +LE + PGG FDPLG A+
Sbjct: 141 APEGSGYPSFWAVLALEIFLVGSAECYR--TGLFENPFPELELSVTPGGRFDPLGFAEAG 198
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG Q T EGP+ N H++DP N+LT
Sbjct: 199 D-LEELKIKELKHCRLSMFAWLGCIAQGLATQEGPIANWQAHVADPVHANVLT 250
>gi|424513507|emb|CCO66129.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Bathycoccus prasinos]
Length = 235
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWA LG G + A G WF G L + + G P+
Sbjct: 63 EIIHGRWAQLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 114
Query: 79 --------NLVFAVIAEIVLVGGAEYYRI---TNGLD---LEDKLHPGGPFDPLGLAKDP 124
+ +I E +LVGGAE YR N D + + PGG FDPLGLA+
Sbjct: 115 APEGSGYPSFWNVLIIETILVGGAEAYRTGLAANPFDDGLVAGDVSPGGRFDPLGLAESG 174
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H +DP N+LT
Sbjct: 175 D-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWTAHTADPVHANVLT 226
>gi|8954053|gb|AAF82226.1|AC069143_2 Contains similarity to a chlorophyll a/b-binding protein type II
from Arabidopsis thaliana gi|S46295 and contains a
chlorophyll A-B binding proteins PF|00504 domain
[Arabidopsis thaliana]
Length = 267
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 32/174 (18%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
ELIH+RWAML G IIPE + G F D + YF + +
Sbjct: 107 ELIHSRWAMLAVTGIIIPECLERLG---------FIENFSWYDAGSREYFADSTTL---- 153
Query: 83 AVIAEIVLVGGAEYYRITN-----GLDLEDKL-----------HPGG-PFDPLGLAK-DP 124
+A++VL+G AE R + +D+E K +PGG FD + + P
Sbjct: 154 -FVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTV 178
+ +L+ KEIKNGRLAM A LGF QA T + P+ENL HL+DP N+ +V
Sbjct: 213 EPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSV 266
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 164
FDPLGL DPD E+ + R AM A+ G + + G +EN +
Sbjct: 88 FDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIENFS 137
>gi|313302|emb|CAA51943.1| chlorophyll a/b /c binding protein precursor [Mantoniella squamata]
Length = 231
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 88/174 (50%), Gaps = 30/174 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 60 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 111
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLD---LED----KLHPGGPFDPLGLAKD 123
+AV+A E+VLVG AE YR GL E+ + PGG FDPLGLA+
Sbjct: 112 APEGSGYPSFWAVLAIEVVLVGLAEAYR--TGLSDSPFEELTVGDVSPGGRFDPLGLAES 169
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP N+LT
Sbjct: 170 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQAHVADPVHANVLT 222
>gi|312283035|dbj|BAJ34383.1| unnamed protein product [Thellungiella halophila]
Length = 256
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G YF + +V
Sbjct: 93 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAG-------EQEYFTDKTTLFVV- 142
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
E++L+G AE R N L D +PGG FDPLG P
Sbjct: 143 ----ELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 198
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 199 AKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 244
>gi|297817464|ref|XP_002876615.1| Lhca2 protein [Arabidopsis lyrata subsp. lyrata]
gi|297322453|gb|EFH52874.1| Lhca2 protein [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G YF + +V
Sbjct: 94 ELVHCRWAMLGAAGIFIPEFLTKIGILNTPS--WYTAGEQ-------EYFTDKTTLFVV- 143
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
E++L+G AE R N L D +PGG FDPLG P
Sbjct: 144 ----ELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSP 199
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q TG GP++NL HL+DP
Sbjct: 200 AKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 245
>gi|358249066|ref|NP_001239987.1| uncharacterized protein LOC100794944 [Glycine max]
gi|255635762|gb|ACU18230.1| unknown [Glycine max]
Length = 267
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 78/166 (46%), Gaps = 32/166 (19%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+H RWAMLGAAG IPE K G P W+ G L +T F
Sbjct: 104 ELVHCRWAMLGAAGIFIPEFLTKIGVLNTPS--WYSAGELEYFTDTTTLF---------- 151
Query: 83 AVIAEIVLVGGAEYYRIT----------------NGLDLEDKLHPGG-PFDPLGLAK-DP 124
I E+ +G AE R N L D +PGG FDPLG P
Sbjct: 152 --IVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSP 209
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+ L+ KEIKNGRLAM A++G + Q T GP++NL HL+DP
Sbjct: 210 QKIKDLRTKEIKNGRLAMLAVMGAWFQHIYTATGPIDNLFAHLADP 255
>gi|356556398|ref|XP_003546513.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Glycine max]
Length = 260
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+HARWAML G ++PE K G W+ GA YF P L
Sbjct: 98 ELMHARWAMLAVFGILVPELLEKIGYI--ENFSWYDAGAR-------EYFVD--PTTLFV 146
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
+ + V G + + N +D+E K+ +PGG FDP+ + P+
Sbjct: 147 VQMGLMGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRGSPEPV 206
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+L+ KEIKNGRLAM A +GF+ QA TGEGP+ENL HL+DP N+ + +
Sbjct: 207 MVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFT 259
>gi|308808233|ref|XP_003081427.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
gi|63029293|gb|AAY27545.1| chloroplast light-harvesting complex I protein precursor Lhca2
[Ostreococcus tauri]
gi|116059889|emb|CAL55596.1| PSI-associated light-harvesting chlorophyll a/b binding protein,
(IC) [Ostreococcus tauri]
Length = 242
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL HARWAMLG AG + PE K G P V D T Y+ P+ +
Sbjct: 81 ELQHARWAMLGVAGAVAPELLTKIGVADLPNWV---------DAGTYQYWAPAGPLFFIQ 131
Query: 83 AVIAEIVLVGGAEYYRITNGLDLE------------DKLHPGGPFDPLGLAKDPDQFALL 130
+ V + + ++ + D +PGG FD LG AKDP + L
Sbjct: 132 MAMFNWAEVRRWQDMKNPGSMNTDPLFGYNSNDTNTDVGYPGGLFDKLGYAKDPAKAKEL 191
Query: 131 KVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
K+KEIKNGRLAM A LG Q TG+GPVENL H++ P
Sbjct: 192 KLKEIKNGRLAMVAFLGICAQYVQTGQGPVENLFSHIASP 231
>gi|87313217|gb|ABD37905.1| light-harvesting chlorophyll-a/b binding protein Lhca3
[Chlamydomonas incerta]
Length = 245
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 41/187 (21%)
Query: 14 TSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 73
T+ Y+ EL HARWAMLG AG ++ E P+ +++ G
Sbjct: 53 TALKWYRQSELQHARWAMLGVAGVLVQEIVK-------PDVYFYEAG-----------LP 94
Query: 74 KNIP-----INLVFAVIAEIVLVGGAEYYRITN----GLDLEDKL------------HPG 112
+N+P IN+ + E +L+ E R + G ED + +PG
Sbjct: 95 QNLPEPFTNINMGGLLAWEFILMHWVEVRRWQDYKNFGSVNEDPIFKGNKVPNPEMGYPG 154
Query: 113 GPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFA 172
G FDP G +K F L+ KEIKNGRLAM A + F LQA TG+GP+ L+ HLS+PF
Sbjct: 155 GIFDPFGFSKG--DFKELQTKEIKNGRLAMIAYMAFILQAQATGKGPLAALSAHLSNPFG 212
Query: 173 NNLLTVI 179
NN+L I
Sbjct: 213 NNILKNI 219
>gi|541565|gb|AAA57542.1| PSI type II chlorophyll a/b-binding protein [Arabidopsis thaliana]
Length = 271
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
ELIH+RWAML G IIPE + G F D + YF + +
Sbjct: 108 ELIHSRWAMLAVTGIIIPECLERLG---------FIENFSWYDAGSREYFADSTTL---- 154
Query: 83 AVIAEIVLVGGAEYYRITN-----GLDLEDKL-----------HPGG-PFDPLGLAK-DP 124
+A++VL+G AE R + +D+E K +PGG FD + + P
Sbjct: 155 -FVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDAGYPGGLWFDFMMWGRGSP 213
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ +L+ KEIKNGRLAM A LGF QA T + P+ENL HL+DP N+ + + +
Sbjct: 214 EPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTSH 271
>gi|388513951|gb|AFK45037.1| unknown [Medicago truncatula]
Length = 267
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 83/163 (50%), Gaps = 26/163 (15%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL+HARWAMLG +G +IPE K G W+ G ++ YF P L
Sbjct: 104 ELMHARWAMLGVSGILIPEILEKIGYV--KNFSWYNAG-------SVEYFAD--PTTLFI 152
Query: 83 AVIAEIVLVGGAEYYRITN--GLDLEDKL-----------HPGG-PFDPLGLAK-DPDQF 127
+A + V G + I N +D+E KL +PGG FDP+ + P+
Sbjct: 153 VQLALMGWVEGRRWADIVNPGSVDIEPKLPNRPNPKPDVGYPGGLWFDPMQWGRGSPEPV 212
Query: 128 ALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDP 170
+L+ KEIKNGRLAM A LGF QA G P++NL HL+DP
Sbjct: 213 MVLRTKEIKNGRLAMLAFLGFCFQAVYVGGSPIDNLMAHLADP 255
>gi|225457389|ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
vinifera]
gi|147843386|emb|CAN79984.1| hypothetical protein VITISV_038035 [Vitis vinifera]
Length = 252
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 28/176 (15%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL+++RWAMLG AG ++PE F K G P+ W+ D YF + +
Sbjct: 91 YVQAELVNSRWAMLGVAGMLLPEVFTKIGIINAPQ--WY-------DAGKAEYFASSSTL 141
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPD 125
++ ++ V + + I N G +D + +PGG F+PL A P
Sbjct: 142 FVIEFILFHYVEI--RRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFA--PT 197
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
+ A K KE+ NGRLAM A LGF +Q VTG+GP +NL +H+SDP+ N ++ + G
Sbjct: 198 EEA--KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 251
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ N R AM + G L T G
Sbjct: 76 FDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIG 119
>gi|297733963|emb|CBI15210.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 28/176 (15%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL+++RWAMLG AG ++PE F K G P+ W+ D YF + +
Sbjct: 88 YVQAELVNSRWAMLGVAGMLLPEVFTKIGIINAPQ--WY-------DAGKAEYFASSSTL 138
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPD 125
++ ++ V + + I N G +D + +PGG F+PL A P
Sbjct: 139 FVIEFILFHYVEI--RRWQDIKNPGSVNQDPIFKNYSLPPNEVGYPGGIFNPLNFA--PT 194
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
+ A K KE+ NGRLAM A LGF +Q VTG+GP +NL +H+SDP+ N ++ + G
Sbjct: 195 EEA--KEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHISDPWHNTIIQTLRG 248
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ N R AM + G L T G
Sbjct: 73 FDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKIG 116
>gi|313300|emb|CAA51944.1| chlorophyll a/b /c binding protein precursor [Mantoniella squamata]
Length = 222
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 88/174 (50%), Gaps = 30/174 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 51 EVIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 102
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGLD---LED----KLHPGGPFDPLGLAKD 123
+AV+A E+VLVG AE YR GL E+ + PGG FDPLGLA+
Sbjct: 103 APEGSGYPSFWAVLAIEVVLVGLAEAYR--TGLSDSPFEELTVGDVSPGGRFDPLGLAES 160
Query: 124 PDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LK+KE+K+ RL+MFA LG QA T EGP+ N H++DP N+LT
Sbjct: 161 GD-LEELKIKELKHCRLSMFAWLGCIFQALATQEGPIANWQAHVADPVHANVLT 213
>gi|15221956|ref|NP_173349.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana]
gi|21554357|gb|AAM63464.1| PSI type II chlorophyll a/b-binding protein, putative [Arabidopsis
thaliana]
gi|56381917|gb|AAV85677.1| At1g19150 [Arabidopsis thaliana]
gi|58331805|gb|AAW70400.1| At1g19150 [Arabidopsis thaliana]
gi|332191690|gb|AEE29811.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana]
Length = 270
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
ELIH+RWAML G IIPE + G F D + YF + +
Sbjct: 107 ELIHSRWAMLAVTGIIIPECLERLG---------FIENFSWYDAGSREYFADSTTL---- 153
Query: 83 AVIAEIVLVGGAEYYRITN-----GLDLEDKL-----------HPGG-PFDPLGLAK-DP 124
+A++VL+G AE R + +D+E K +PGG FD + + P
Sbjct: 154 -FVAQMVLMGWAEGRRWADLIKPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSP 212
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 182
+ +L+ KEIKNGRLAM A LGF QA T + P+ENL HL+DP N+ + + +
Sbjct: 213 EPVMVLRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTSH 270
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 164
FDPLGL DPD E+ + R AM A+ G + + G +EN +
Sbjct: 88 FDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIENFS 137
>gi|297819360|ref|XP_002877563.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323401|gb|EFH53822.1| chlorophyll a/b-binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 252
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 28/171 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVF 82
EL++ RWAMLG AG ++PE F K G PE W+ D YF + + ++
Sbjct: 97 ELVNGRWAMLGVAGMLLPEVFTKLGIINVPE--WY-------DAGKEQYFASSSTLFVIE 147
Query: 83 AVIAEIVLVGGAEYYRITN-GLDLEDKL------------HPGGPFDPLGLAKDPDQFAL 129
++ V + + I N G +D + +PGG F+PL A +
Sbjct: 148 FILFHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEA--- 202
Query: 130 LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
K KEI NGRLAM A LGF +Q VTG+GP ENL +HLSDP+ N ++ +S
Sbjct: 203 -KEKEIANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTLS 252
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ NGR AM + G L T G
Sbjct: 78 FDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKLG 121
>gi|168068456|ref|XP_001786080.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662173|gb|EDQ49108.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 4 ILLVSARNQTTSASIYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALL 63
+L A + + + EL+H RWAMLGAAG IPEA K G T +
Sbjct: 93 VLRTCAGSDPETLKWFVQAELVHCRWAMLGAAGIFIPEALTKMGI--------LNTPSWT 144
Query: 64 LDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRIT----------------NGLDLED 107
+ G+ +YF + ++ E++L AE R N L D
Sbjct: 145 VAGDA-DYFTDKTTLFVI-----ELILFAWAEGRRWADIVNPGCVNVDPVFPNNKLTGTD 198
Query: 108 KLHPGG-PFDPLGLAKDPDQFAL--LKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLA 164
+PGG FDPLG + D L L+ +EIKNGRLAM A+LG +QA T GP++NL
Sbjct: 199 VGYPGGLWFDPLGWGQTSDAAKLKDLRTREIKNGRLAMLAVLGAIVQANYTHTGPIDNLV 258
Query: 165 KHLSDPFANNLLTV 178
HL DP N + +
Sbjct: 259 AHLVDPGHNTIFAL 272
>gi|356516812|ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
[Glycine max]
Length = 252
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 28/176 (15%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI 78
Y EL++ RWAMLG AG ++PE F K G P+ W+ D YF + +
Sbjct: 91 YVQAELVNGRWAMLGVAGMLLPEVFTKIGIINAPQ--WY-------DAGKSEYFASSSTL 141
Query: 79 NLVFAVIAEIVLVGGAEYYRITN-------------GLDLEDKLHPGGPFDPLGLAKDPD 125
++ ++ V + + I N L + +PG F+PL A +
Sbjct: 142 FVIEFILFHYVEI--RRWQDIKNPGSVNQDPIFKQYSLPQHECGYPGSVFNPLNFAPTLE 199
Query: 126 QFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISG 181
K KE+ NGRLAM A LGF +Q VTG+GP ENL +HLSDP+ N ++ I G
Sbjct: 200 A----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLSDPWHNTIINTIRG 251
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 115 FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEG 158
FDPLGLA+DP+ E+ NGR AM + G L T G
Sbjct: 76 FDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKIG 119
>gi|303274206|ref|XP_003056426.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
gi|226462510|gb|EEH59802.1| prasinophyte specific chlorophyll a/b-binding protein, chloroplast
precursor [Micromonas pusilla CCMP1545]
Length = 257
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 87/173 (50%), Gaps = 29/173 (16%)
Query: 23 ELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL----NYFGKNIPI 78
E+IH RWAMLG G + A G WF G L + + G P+
Sbjct: 87 EIIHGRWAMLGVTG--------AWAAENGTGIPWFTAGTLCTPDDCTAVADKFPGAVAPL 138
Query: 79 N-------LVFAVIA-EIVLVGGAEYYRITNGL------DLEDKLHPGGPFDPLGLAKDP 124
+AV++ E+ LVG AE YR GL +LE + PGG FDPLG A+
Sbjct: 139 APEGSGYPSFWAVLSIEVFLVGSAECYR--TGLFENPFPELELSVTPGGRFDPLGFAEAG 196
Query: 125 DQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 177
D LKVKE+K+ RL+MFA LG QA T EGP+ N H++DP N+L+
Sbjct: 197 D-LEELKVKELKHCRLSMFAWLGCIAQALATQEGPIANWQAHVADPVHANVLS 248
>gi|168067076|ref|XP_001785452.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168067086|ref|XP_001785457.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662935|gb|EDQ49732.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662940|gb|EDQ49737.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Query: 19 YQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL-LLDGNTLNYFGKNIP 77
++ ELIH RWAML G + EAF W G + L+DG + YFG +P
Sbjct: 143 FRECELIHGRWAMLAILGALSVEAFTG--------VTWQDAGKVELVDGAS--YFGLPLP 192
Query: 78 INLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPF-DPLGLAKDPDQFALLKVKEIK 136
++ V E LVG E+ R LD E +L+PGG F DPL A ++ LK+ EIK
Sbjct: 193 FSITSLVYIEAFLVGFIEFQRNAE-LDPEKRLYPGGKFFDPLNFADTEEKKETLKLAEIK 251
Query: 137 NGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVIS 180
+ RLAM A LGF QA TG+GP++N A HL+DP + S
Sbjct: 252 HARLAMVAALGFAAQAAATGKGPLDNWATHLADPLHTTIFDTFS 295
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,279,057,978
Number of Sequences: 23463169
Number of extensions: 144955902
Number of successful extensions: 280346
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 274628
Number of HSP's gapped (non-prelim): 3340
length of query: 189
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 55
effective length of database: 9,215,130,721
effective search space: 506832189655
effective search space used: 506832189655
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)