Query 029741
Match_columns 188
No_of_seqs 135 out of 1314
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 04:03:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dy0_A APRT, adenine phosphori 100.0 3.7E-32 1.3E-36 211.6 18.5 179 6-184 6-189 (190)
2 1zn8_A APRT, adenine phosphori 100.0 5.4E-32 1.8E-36 208.8 18.4 173 11-183 3-180 (180)
3 1g2q_A Adenine phosphoribosylt 100.0 6.4E-32 2.2E-36 209.8 18.2 172 12-184 5-182 (187)
4 1qb7_A APRT, adenine phosphori 100.0 1.1E-31 3.9E-36 215.5 19.0 176 10-185 15-208 (236)
5 1l1q_A Adenine phosphoribosylt 100.0 4.5E-30 1.6E-34 199.2 17.5 174 11-184 2-180 (186)
6 3m3h_A OPRT, oprtase, orotate 99.9 3.4E-26 1.2E-30 183.1 12.5 143 32-188 56-204 (234)
7 1vch_A Phosphoribosyltransfera 99.9 3.3E-26 1.1E-30 175.4 11.1 166 10-183 3-173 (175)
8 3dez_A OPRT, oprtase, orotate 99.9 1.2E-25 4E-30 180.8 13.0 143 32-188 68-216 (243)
9 1y0b_A Xanthine phosphoribosyl 99.9 2.4E-24 8.4E-29 168.1 17.7 169 13-185 7-184 (197)
10 1o57_A PUR operon repressor; p 99.9 1.9E-24 6.5E-29 178.2 17.2 169 13-184 83-254 (291)
11 2yzk_A OPRT, oprtase, orotate 99.9 1.5E-24 5.3E-29 166.9 13.5 141 32-187 26-171 (178)
12 2wns_A Orotate phosphoribosylt 99.9 2.3E-24 8E-29 169.5 14.2 143 32-188 30-177 (205)
13 3mjd_A Orotate phosphoribosylt 99.9 1.8E-24 6.2E-29 172.8 13.4 143 31-188 49-210 (232)
14 2p1z_A Phosphoribosyltransfera 99.9 3.4E-24 1.2E-28 165.4 14.5 141 31-185 32-177 (180)
15 3qw4_B UMP synthase; N-termina 99.9 9.6E-24 3.3E-28 183.3 16.2 165 7-186 256-429 (453)
16 1lh0_A OMP synthase; loop clos 99.9 9.1E-24 3.1E-28 167.0 12.5 140 32-187 32-189 (213)
17 3n2l_A OPRT, oprtase, orotate 99.9 1.3E-23 4.5E-28 168.2 12.8 141 32-188 57-215 (238)
18 2ps1_A Orotate phosphoribosylt 99.9 3.1E-23 1.1E-27 165.3 12.3 142 32-188 36-202 (226)
19 2aee_A OPRT, oprtase, orotate 99.9 7.5E-23 2.6E-27 161.4 13.6 139 32-184 36-180 (211)
20 3hvu_A Hypoxanthine phosphorib 99.8 3.3E-20 1.1E-24 145.5 15.3 153 24-184 17-174 (204)
21 1vdm_A Purine phosphoribosyltr 99.8 6.2E-20 2.1E-24 137.4 13.6 138 40-188 4-142 (153)
22 1hgx_A HGXPRTASE, hypoxanthine 99.8 1.3E-19 4.3E-24 139.8 12.4 146 31-184 4-154 (183)
23 1fsg_A HGPRTASE, hypoxanthine- 99.8 7.6E-20 2.6E-24 146.3 11.0 137 22-168 30-185 (233)
24 2geb_A Hypoxanthine-guanine ph 99.8 2.5E-18 8.5E-23 132.9 14.3 140 37-184 12-156 (185)
25 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 8.1E-19 2.8E-23 138.9 11.3 136 22-167 16-168 (217)
26 2jbh_A Phosphoribosyltransfera 99.8 1.7E-18 5.7E-23 137.8 11.9 151 25-184 27-192 (225)
27 3o7m_A Hypoxanthine phosphorib 99.8 5.6E-18 1.9E-22 131.1 14.6 144 33-184 4-152 (186)
28 1pzm_A HGPRT, hypoxanthine-gua 99.8 3.7E-18 1.3E-22 134.6 13.3 144 31-184 17-176 (211)
29 1tc1_A Protein (hypoxanthine p 99.8 1.6E-17 5.5E-22 131.7 15.3 141 36-184 6-161 (220)
30 1yfz_A Hypoxanthine-guanine ph 99.8 6.2E-18 2.1E-22 132.6 12.7 140 37-184 32-176 (205)
31 2ywu_A Hypoxanthine-guanine ph 99.7 5.4E-17 1.8E-21 125.1 14.9 137 40-184 12-153 (181)
32 3ozf_A Hypoxanthine-guanine-xa 99.7 1.9E-17 6.4E-22 133.3 12.0 142 27-168 49-199 (250)
33 1a3c_A PYRR, pyrimidine operon 99.7 4.5E-17 1.5E-21 125.1 12.7 141 37-184 3-156 (181)
34 1nul_A XPRT, xanthine-guanine 99.7 2.7E-17 9.2E-22 123.3 11.0 113 40-168 5-119 (152)
35 3ohp_A Hypoxanthine phosphorib 99.7 1.4E-16 4.8E-21 122.4 15.3 138 39-184 6-149 (177)
36 3lrt_A Ribose-phosphate pyroph 99.7 1.1E-16 3.7E-21 131.4 14.4 116 54-184 145-263 (286)
37 1wd5_A Hypothetical protein TT 99.7 1E-16 3.5E-21 125.9 12.7 122 62-183 23-179 (208)
38 1ufr_A TT1027, PYR mRNA-bindin 99.7 2.3E-16 7.8E-21 121.3 12.5 121 40-165 6-137 (181)
39 1u9y_A RPPK;, ribose-phosphate 99.7 1.7E-16 5.9E-21 130.3 9.4 121 51-184 143-266 (284)
40 2xbu_A Hypoxanthine-guanine ph 99.7 7.6E-16 2.6E-20 122.2 12.4 128 39-167 6-162 (221)
41 3s5j_B Ribose-phosphate pyroph 99.7 4.9E-16 1.7E-20 129.4 11.3 122 50-184 151-274 (326)
42 3acd_A Hypoxanthine-guanine ph 99.6 5.2E-15 1.8E-19 114.0 14.4 140 37-184 9-153 (181)
43 3dah_A Ribose-phosphate pyroph 99.6 1.2E-15 4.3E-20 126.8 10.3 110 62-184 166-277 (319)
44 2ji4_A Phosphoribosyl pyrophos 99.6 9.4E-16 3.2E-20 130.4 9.7 134 49-184 178-333 (379)
45 1dku_A Protein (phosphoribosyl 99.6 3.1E-15 1.1E-19 124.5 11.8 110 62-184 167-278 (317)
46 1w30_A PYRR bifunctional prote 99.6 2.8E-15 9.6E-20 117.2 10.3 123 38-165 13-153 (201)
47 1ecf_A Glutamine phosphoribosy 99.6 4.8E-15 1.6E-19 130.4 9.6 116 47-163 279-397 (504)
48 1ao0_A Glutamine phosphoribosy 99.5 3E-14 1E-18 124.0 8.0 115 46-162 258-375 (459)
49 1dqn_A Guanine phosphoribosylt 99.4 2.5E-13 8.5E-18 108.2 4.8 114 37-166 31-154 (230)
50 1i5e_A Uracil phosphoribosyltr 99.3 1.8E-11 6.1E-16 96.1 13.4 146 8-172 6-171 (209)
51 1o5o_A Uracil phosphoribosyltr 99.3 2.6E-11 8.8E-16 95.9 12.1 142 8-172 18-183 (221)
52 2ehj_A Uracil phosphoribosyltr 99.2 3.7E-10 1.3E-14 88.5 13.6 142 8-172 5-170 (208)
53 2e55_A Uracil phosphoribosyltr 99.2 4E-10 1.4E-14 88.3 13.5 141 8-172 4-168 (208)
54 1v9s_A Uracil phosphoribosyltr 99.2 3.9E-10 1.3E-14 88.4 11.8 142 8-172 5-170 (208)
55 1bd3_D Uprtase, uracil phospho 99.0 3E-09 1E-13 85.1 9.4 98 64-172 104-205 (243)
56 3dmp_A Uracil phosphoribosyltr 98.8 9.9E-09 3.4E-13 80.8 7.5 96 65-172 80-178 (217)
57 1xtt_A Probable uracil phospho 98.6 2.1E-07 7E-12 73.2 8.7 100 64-172 73-180 (216)
58 3dah_A Ribose-phosphate pyroph 88.2 5.8 0.0002 32.4 10.8 80 69-162 12-95 (319)
59 3s5j_B Ribose-phosphate pyroph 83.0 17 0.00059 29.7 11.2 78 71-162 10-91 (326)
60 1u9y_A RPPK;, ribose-phosphate 81.6 18 0.00062 28.7 10.9 77 72-162 8-87 (284)
61 1dku_A Protein (phosphoribosyl 77.2 27 0.00093 28.2 11.4 84 65-162 10-97 (317)
62 2ji4_A Phosphoribosyl pyrophos 67.7 51 0.0017 27.3 10.3 78 71-162 36-120 (379)
63 3lrt_A Ribose-phosphate pyroph 64.6 19 0.00064 28.8 6.8 74 73-162 9-86 (286)
64 1r6j_A Syntenin 1; PDZ, membra 55.1 20 0.0007 22.8 4.5 35 122-156 41-75 (82)
65 3lkv_A Uncharacterized conserv 54.8 73 0.0025 24.8 13.2 77 9-92 17-97 (302)
66 3ghf_A Septum site-determining 54.3 9.5 0.00033 26.4 2.9 73 12-90 29-101 (120)
67 4hwg_A UDP-N-acetylglucosamine 49.6 33 0.0011 28.2 6.1 48 44-91 76-123 (385)
68 3s2u_A UDP-N-acetylglucosamine 49.5 44 0.0015 27.0 6.7 37 55-91 85-121 (365)
69 3f6p_A Transcriptional regulat 47.5 41 0.0014 21.7 5.3 28 125-155 2-29 (120)
70 3hix_A ALR3790 protein; rhodan 45.7 26 0.00089 22.9 4.0 32 123-157 50-81 (106)
71 3to5_A CHEY homolog; alpha(5)b 45.6 19 0.00065 25.0 3.4 31 124-157 11-41 (134)
72 3gl9_A Response regulator; bet 45.5 46 0.0016 21.6 5.3 27 126-155 3-29 (122)
73 3gge_A PDZ domain-containing p 44.7 44 0.0015 22.0 4.9 43 121-163 46-88 (95)
74 3ilm_A ALR3790 protein; rhodan 43.3 31 0.0011 24.0 4.3 33 122-157 53-85 (141)
75 3rsc_A CALG2; TDP, enediyne, s 42.9 59 0.002 26.2 6.6 43 49-92 105-147 (415)
76 3foj_A Uncharacterized protein 42.6 58 0.002 20.8 5.4 29 122-153 53-81 (100)
77 3ia7_A CALG4; glycosysltransfe 41.9 68 0.0023 25.4 6.8 42 50-92 90-131 (402)
78 2jtq_A Phage shock protein E; 41.1 42 0.0014 20.7 4.3 33 123-158 39-71 (85)
79 2iya_A OLEI, oleandomycin glyc 39.2 77 0.0026 25.6 6.8 41 50-92 97-137 (424)
80 1o97_C Electron transferring f 38.4 51 0.0018 25.8 5.3 42 49-90 99-144 (264)
81 3otg_A CALG1; calicheamicin, T 38.2 59 0.002 26.0 5.8 38 52-91 120-157 (412)
82 3lte_A Response regulator; str 37.5 66 0.0023 20.8 5.2 29 124-155 5-33 (132)
83 2p6p_A Glycosyl transferase; X 36.9 73 0.0025 25.3 6.2 39 51-91 96-134 (384)
84 2yjn_A ERYCIII, glycosyltransf 36.9 52 0.0018 27.0 5.4 38 52-91 134-171 (441)
85 1efv_B Electron transfer flavo 36.7 57 0.0019 25.5 5.2 42 49-90 103-148 (255)
86 4fzr_A SSFS6; structural genom 35.9 76 0.0026 25.4 6.2 39 51-91 112-150 (398)
87 2iyf_A OLED, oleandomycin glyc 35.6 1.1E+02 0.0037 24.7 7.1 41 50-92 92-132 (430)
88 3tum_A Shikimate dehydrogenase 35.5 62 0.0021 25.4 5.3 36 123-165 123-158 (269)
89 3gk5_A Uncharacterized rhodane 35.2 49 0.0017 21.6 4.1 29 122-153 52-80 (108)
90 1gmx_A GLPE protein; transfera 34.7 39 0.0013 22.0 3.5 32 123-157 56-87 (108)
91 1efp_B ETF, protein (electron 34.2 54 0.0018 25.5 4.7 41 50-90 101-145 (252)
92 3t4e_A Quinate/shikimate dehyd 33.2 76 0.0026 25.5 5.6 32 123-158 146-177 (312)
93 3mm4_A Histidine kinase homolo 32.9 53 0.0018 23.9 4.4 29 123-154 59-87 (206)
94 3eod_A Protein HNR; response r 32.5 64 0.0022 20.8 4.4 29 124-155 6-34 (130)
95 3eme_A Rhodanese-like domain p 31.7 78 0.0027 20.2 4.6 29 122-153 53-81 (103)
96 1sxj_A Activator 1 95 kDa subu 31.3 1.6E+02 0.0056 24.9 7.7 55 37-91 38-108 (516)
97 1o63_A ATP phosphoribosyltrans 31.2 14 0.00046 28.6 0.7 20 131-157 146-165 (219)
98 1wi4_A Synip, syntaxin binding 31.1 69 0.0024 21.0 4.3 31 122-152 60-90 (109)
99 3gt7_A Sensor protein; structu 31.0 89 0.0031 21.0 5.1 28 124-154 6-33 (154)
100 3h5i_A Response regulator/sens 30.8 62 0.0021 21.4 4.2 28 124-154 4-31 (140)
101 3dzc_A UDP-N-acetylglucosamine 30.7 91 0.0031 25.4 5.8 44 48-91 97-141 (396)
102 3hzh_A Chemotaxis response reg 30.6 97 0.0033 20.9 5.3 30 124-156 35-64 (157)
103 1ve4_A ATP phosphoribosyltrans 30.3 14 0.00049 28.2 0.7 21 131-158 151-171 (206)
104 3g5j_A Putative ATP/GTP bindin 30.0 69 0.0024 21.2 4.3 28 124-153 87-115 (134)
105 3e17_A Tight junction protein 29.5 1E+02 0.0035 19.1 4.8 33 122-154 40-72 (88)
106 3o46_A Maguk P55 subfamily mem 29.1 99 0.0034 19.2 4.7 32 122-153 47-78 (93)
107 1im4_A DBH; DNA polymerase PAL 28.6 1.2E+02 0.0042 22.8 5.9 72 14-87 90-166 (221)
108 1z7m_E ATP phosphoribosyltrans 28.6 13 0.00044 28.4 0.2 21 131-158 153-173 (208)
109 3m6m_D Sensory/regulatory prot 28.6 84 0.0029 20.9 4.6 29 124-155 13-41 (143)
110 3ot5_A UDP-N-acetylglucosamine 28.1 1E+02 0.0034 25.3 5.6 44 48-91 100-144 (403)
111 2pln_A HP1043, response regula 27.8 84 0.0029 20.5 4.4 29 123-154 16-44 (137)
112 3vot_A L-amino acid ligase, BL 27.6 71 0.0024 26.2 4.7 45 41-88 57-101 (425)
113 1dcf_A ETR1 protein; beta-alph 27.4 87 0.003 20.4 4.4 28 124-154 6-33 (136)
114 2d92_A INAD-like protein; PDZ 27.1 1.3E+02 0.0044 19.4 5.6 36 122-157 63-98 (108)
115 3tsa_A SPNG, NDP-rhamnosyltran 26.8 1.4E+02 0.0047 23.6 6.2 39 51-91 103-141 (391)
116 3i42_A Response regulator rece 26.7 95 0.0032 19.8 4.4 25 126-153 4-28 (127)
117 1i16_A Interleukin 16, LCF; cy 26.6 83 0.0028 21.3 4.2 38 121-158 75-112 (130)
118 2j48_A Two-component sensor ki 26.1 96 0.0033 19.1 4.3 27 125-154 1-27 (119)
119 1tmy_A CHEY protein, TMY; chem 26.1 99 0.0034 19.4 4.4 28 125-155 2-29 (120)
120 3dfz_A SIRC, precorrin-2 dehyd 25.9 78 0.0027 24.1 4.3 30 123-156 29-58 (223)
121 3iwh_A Rhodanese-like domain p 25.9 1.2E+02 0.0042 19.6 4.8 32 122-156 53-84 (103)
122 3fbt_A Chorismate mutase and s 25.7 96 0.0033 24.5 4.9 32 123-158 120-151 (282)
123 3oti_A CALG3; calicheamicin, T 25.7 78 0.0027 25.3 4.5 39 51-91 119-157 (398)
124 3ih5_A Electron transfer flavo 25.3 71 0.0024 24.1 3.9 41 49-89 78-119 (217)
125 1kyq_A Met8P, siroheme biosynt 25.3 96 0.0033 24.4 4.8 32 123-158 11-42 (274)
126 3pwz_A Shikimate dehydrogenase 24.5 1.2E+02 0.0042 23.6 5.3 36 123-165 118-153 (272)
127 3tnl_A Shikimate dehydrogenase 24.0 1.3E+02 0.0046 24.0 5.5 32 123-158 152-183 (315)
128 1mb3_A Cell division response 23.9 1.1E+02 0.0038 19.3 4.3 26 126-154 2-27 (124)
129 3t6k_A Response regulator rece 23.8 1.1E+02 0.0039 19.9 4.5 28 125-155 4-31 (136)
130 2vd3_A ATP phosphoribosyltrans 23.8 23 0.00077 28.5 0.8 21 131-158 158-178 (289)
131 3r68_A Na(+)/H(+) exchange reg 23.7 1.2E+02 0.004 18.8 4.3 36 122-157 47-82 (95)
132 1f0k_A MURG, UDP-N-acetylgluco 23.6 2.2E+02 0.0074 22.0 6.8 41 51-91 85-125 (364)
133 3kto_A Response regulator rece 23.6 1.1E+02 0.0038 19.9 4.4 28 125-155 6-33 (136)
134 2k0z_A Uncharacterized protein 23.6 1.1E+02 0.0038 19.8 4.2 30 123-155 54-83 (110)
135 4amg_A Snogd; transferase, pol 23.6 1.6E+02 0.0055 23.2 6.0 37 53-91 119-155 (400)
136 3snk_A Response regulator CHEY 23.3 1.2E+02 0.004 19.7 4.4 26 124-152 13-38 (135)
137 1h3d_A ATP-phosphoribosyltrans 23.1 23 0.00078 28.6 0.7 20 131-157 167-186 (299)
138 2fsx_A RV0390, COG0607: rhodan 23.0 63 0.0022 22.3 3.0 32 123-157 78-109 (148)
139 2hhg_A Hypothetical protein RP 22.9 1E+02 0.0035 20.7 4.1 32 123-157 84-115 (139)
140 3jyo_A Quinate/shikimate dehyd 22.7 1.4E+02 0.0048 23.4 5.3 36 123-165 125-160 (283)
141 4dad_A Putative pilus assembly 22.6 81 0.0028 20.8 3.5 31 123-156 18-49 (146)
142 3iv7_A Alcohol dehydrogenase I 22.4 1.2E+02 0.004 24.8 4.9 47 49-95 75-122 (364)
143 1nh8_A ATP phosphoribosyltrans 22.2 25 0.00084 28.5 0.7 19 131-156 172-190 (304)
144 3hdv_A Response regulator; PSI 22.2 1.1E+02 0.0038 19.8 4.1 29 124-155 6-34 (136)
145 2ayx_A Sensor kinase protein R 22.2 44 0.0015 25.3 2.2 33 122-157 8-40 (254)
146 5nul_A Flavodoxin; electron tr 22.0 1.4E+02 0.0047 19.9 4.7 44 123-166 77-122 (138)
147 3b76_A E3 ubiquitin-protein li 21.6 1.6E+02 0.0055 19.5 4.8 33 122-154 72-104 (118)
148 1tq1_A AT5G66040, senescence-a 21.5 61 0.0021 21.9 2.6 32 123-157 80-111 (129)
149 3egg_C Spinophilin; PP1, serin 21.3 1.5E+02 0.005 21.3 4.8 33 122-154 130-162 (170)
150 1qxn_A SUD, sulfide dehydrogen 21.3 76 0.0026 21.7 3.1 32 123-157 80-111 (137)
151 3jte_A Response regulator rece 21.2 1.7E+02 0.006 18.9 5.0 26 126-154 4-29 (143)
152 3fet_A Electron transfer flavo 21.1 1.3E+02 0.0043 21.7 4.4 41 48-90 57-98 (166)
153 3o8q_A Shikimate 5-dehydrogena 21.0 1.5E+02 0.0051 23.2 5.1 31 123-157 124-154 (281)
154 1g9o_A NHE-RF; PDZ domain, com 20.7 1.6E+02 0.0053 18.1 4.8 34 122-155 45-78 (91)
155 1iir_A Glycosyltransferase GTF 20.6 2.5E+02 0.0085 22.5 6.7 32 60-92 91-124 (415)
156 3mvn_A UDP-N-acetylmuramate:L- 20.3 1.1E+02 0.0038 21.6 3.9 24 127-150 36-59 (163)
157 3grc_A Sensor protein, kinase; 20.3 1.4E+02 0.0049 19.3 4.4 28 124-154 5-32 (140)
158 2b4a_A BH3024; flavodoxin-like 20.2 1.5E+02 0.0051 19.2 4.5 29 123-154 13-41 (138)
159 2a9o_A Response regulator; ess 20.1 1.7E+02 0.0057 18.1 5.2 26 126-154 2-27 (120)
No 1
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=3.7e-32 Score=211.62 Aligned_cols=179 Identities=49% Similarity=0.912 Sum_probs=150.2
Q ss_pred CCCCCCh-hHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHh
Q 029741 6 NGLRGDP-RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI 84 (188)
Q Consensus 6 ~~~~~~~-~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l 84 (188)
-||.... .|+.|.+.+|..|+||.+|+.|.|+.+++.+++.++.+++.+++.+.+.++|+|++++.+|+++|..+|..+
T Consensus 6 ~~~~~~~~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l 85 (190)
T 2dy0_A 6 SGMTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGL 85 (190)
T ss_dssp ---CCCHHHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHH
Confidence 3454333 378899999999999999999999999999999999999999999977678999999999999999999999
Q ss_pred CCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741 85 GAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164 (188)
Q Consensus 85 ~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~ 164 (188)
++|++.++|..+.+....+..++.+++...+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++
T Consensus 86 ~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~ 165 (190)
T 2dy0_A 86 GVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINL 165 (190)
T ss_dssp TCEEEEEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCEEEEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEc
Confidence 99998887766555444443444344445566553444699999999999999999999999999999999999999999
Q ss_pred hh--hhhccC--CCCeEEEEeccc
Q 029741 165 PE--GQRRLD--GKPLYILVEPRL 184 (188)
Q Consensus 165 ~~--~~~~l~--~~~~~~l~~~~~ 184 (188)
.+ ++++|+ ++|+++|+++++
T Consensus 166 ~~~~~~~~l~~~g~~v~sl~~~~~ 189 (190)
T 2dy0_A 166 FDLGGEQRLEKQGITSYSLVPFPG 189 (190)
T ss_dssp GGGCHHHHHHTTTCEEEEEEEECC
T ss_pred cCcchHHHHhhCCCcEEEEEEecC
Confidence 75 778886 899999999875
No 2
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=100.00 E-value=5.4e-32 Score=208.81 Aligned_cols=173 Identities=42% Similarity=0.806 Sum_probs=147.5
Q ss_pred ChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCC
Q 029741 11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAK 87 (188)
Q Consensus 11 ~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p 87 (188)
.|.|+.|.+.+|..|+||.+|..|.|+..++.+|+..+.+++.+++.+.+. ++|+|++++.||+++|..+|..+++|
T Consensus 3 ~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p 82 (180)
T 1zn8_A 3 DSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82 (180)
T ss_dssp CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred hHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCC
Confidence 477899999999999999999999999999999999999999999988653 38999999999999999999999999
Q ss_pred eEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-
Q 029741 88 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE- 166 (188)
Q Consensus 88 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~- 166 (188)
+.++++..+.+....+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++
T Consensus 83 ~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 162 (180)
T 1zn8_A 83 CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL 162 (180)
T ss_dssp EEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence 9887776554443333333333334456665444468999999999999999999999999999999999999999975
Q ss_pred -hhhccCCCCeEEEEecc
Q 029741 167 -GQRRLDGKPLYILVEPR 183 (188)
Q Consensus 167 -~~~~l~~~~~~~l~~~~ 183 (188)
+.++++++|+++|++++
T Consensus 163 ~~~~~l~~~~~~sl~~~~ 180 (180)
T 1zn8_A 163 KGREKLAPVPFFSLLQYE 180 (180)
T ss_dssp CHHHHHTTSCEEEEEEEC
T ss_pred chhhhhcCCceEEEEecC
Confidence 67888899999999874
No 3
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=100.00 E-value=6.4e-32 Score=209.77 Aligned_cols=172 Identities=36% Similarity=0.708 Sum_probs=145.3
Q ss_pred hhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc----CCCcEEEEeCCCChhhHHHHHHHhCCC
Q 029741 12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAK 87 (188)
Q Consensus 12 ~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~gG~~~a~~lA~~l~~p 87 (188)
++.++|.+.+|..|+||.+|+.|+|+..++.+++.++.+++.|++++.+ .++|+|+|++.||+++|..+|..+++|
T Consensus 5 ~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p 84 (187)
T 1g2q_A 5 SYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVG 84 (187)
T ss_dssp HHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCCC
Confidence 4677899999999999999999999999999999999999999999976 568999999999999999999999999
Q ss_pred eEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-
Q 029741 88 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE- 166 (188)
Q Consensus 88 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~- 166 (188)
+..+++..+.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++
T Consensus 85 ~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 164 (187)
T 1g2q_A 85 FVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFL 164 (187)
T ss_dssp EEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCS
T ss_pred EEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCc
Confidence 9888776654444333334433444566665444569999999999999999999999999999999999999999985
Q ss_pred -hhhccCCCCeEEEEeccc
Q 029741 167 -GQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 167 -~~~~l~~~~~~~l~~~~~ 184 (188)
+++++ |+|++||+++++
T Consensus 165 ~g~~~l-~~~~~sl~~~~~ 182 (187)
T 1g2q_A 165 KGRSKL-NAPVFTLLNAQK 182 (187)
T ss_dssp SCCCCC-SSCEEECC----
T ss_pred Cchhhc-CccEEEEEEech
Confidence 67788 999999999986
No 4
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=100.00 E-value=1.1e-31 Score=215.53 Aligned_cols=176 Identities=32% Similarity=0.540 Sum_probs=152.5
Q ss_pred CChhHHHHhhccccc-CCCCCCCc-eEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhC
Q 029741 10 GDPRLQGISKAIRVV-PDFPIPGI-MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIG 85 (188)
Q Consensus 10 ~~~~~~~~~~~~r~~-~~~~~~g~-~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~ 85 (188)
++++.++|.+.+|+. |+||.+|+ .|+|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.||+++|..+|..|+
T Consensus 15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~ 94 (236)
T 1qb7_A 15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE 94 (236)
T ss_dssp TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence 678899999999999 99999999 99999999999999999999999999876 789999999999999999999999
Q ss_pred CCeEEEeecCCCCCccc-chheeeec---cceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEE
Q 029741 86 AKFVPLRKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 161 (188)
Q Consensus 86 ~p~~~~~k~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l 161 (188)
+|+++++|..+.++... +.++..++ +.+.+.+..+...+|++||||||++|||+|+.++++.|+++|+++++++++
T Consensus 95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 174 (236)
T 1qb7_A 95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI 174 (236)
T ss_dssp CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 99998887665554433 33344333 334566654555699999999999999999999999999999999999999
Q ss_pred eeChh--hhhccC--------CCCeEEEEecccc
Q 029741 162 VGLPE--GQRRLD--------GKPLYILVEPRLS 185 (188)
Q Consensus 162 ~~~~~--~~~~l~--------~~~~~~l~~~~~~ 185 (188)
+++.+ +++++. |+++++|+++++.
T Consensus 175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~~~ 208 (236)
T 1qb7_A 175 LSIPFLKAAEKIHSTANSRYKDIKFISLLSDDAL 208 (236)
T ss_dssp EECGGGCHHHHHHHHHHHTTTTCCEEEEEEGGGC
T ss_pred EEcccccHHHHHhhhcccccCCCcEEEEEEcccc
Confidence 99975 677776 8999999999873
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.97 E-value=4.5e-30 Score=199.21 Aligned_cols=174 Identities=32% Similarity=0.552 Sum_probs=146.7
Q ss_pred ChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE
Q 029741 11 DPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 90 (188)
Q Consensus 11 ~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~ 90 (188)
.|.++.|.+.+|.+|+||.+|..|.|+..++.+++..+.+++.+++.+.+.++|+|+|++.||+++|..+|..+++|+..
T Consensus 2 ~~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~ 81 (186)
T 1l1q_A 2 TMSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA 81 (186)
T ss_dssp CCCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEE
T ss_pred chhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEE
Confidence 36788899999999999999999999999999999999999999998876678999999999999999999999999988
Q ss_pred EeecCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCe--EEEEEEEeeChh-
Q 029741 91 LRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPE- 166 (188)
Q Consensus 91 ~~k~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~--~v~v~~l~~~~~- 166 (188)
++|..+.++......++..++.. .+.+..+...+|++||||||++|||+|+.++++.|+++|++ ++.+++++++++
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~ 161 (186)
T 1l1q_A 82 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL 161 (186)
T ss_dssp EEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG
T ss_pred EEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc
Confidence 87766544443333333222322 45554344458999999999999999999999999999999 999999999986
Q ss_pred -hhhccCCCCeEEEEeccc
Q 029741 167 -GQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 167 -~~~~l~~~~~~~l~~~~~ 184 (188)
+++++.+..+.+|+-+.+
T Consensus 162 ~g~~~l~~~~~~~~~~~~~ 180 (186)
T 1l1q_A 162 KGREKVGQKCTRLFSVIRE 180 (186)
T ss_dssp CHHHHHTTTCCCEEEEEEC
T ss_pred cHHHHHhhcCcceehhhhh
Confidence 788999888888887654
No 6
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.94 E-value=3.4e-26 Score=183.11 Aligned_cols=143 Identities=20% Similarity=0.321 Sum_probs=117.3
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 109 (188)
..|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.+|+++|..+|..|++|++++||..+.++..
T Consensus 56 p~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~~-------- 127 (234)
T 3m3h_A 56 PIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKG-------- 127 (234)
T ss_dssp SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC-----------------
T ss_pred CEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCcc--------
Confidence 789999999999999999999999999865 7899999999999999999999999999988766533221
Q ss_pred ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccC--CCCeEEEEecccc
Q 029741 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLS 185 (188)
Q Consensus 110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~--~~~~~~l~~~~~~ 185 (188)
..+. +...+|++||||||++|||+|+.++++.|+++|++++++++++++.. +.++++ |+|+++|+++++.
T Consensus 128 ---~~i~---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~~dl 201 (234)
T 3m3h_A 128 ---NQIE---GKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYSAL 201 (234)
T ss_dssp ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCHHHH
T ss_pred ---eEEe---cccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeHHHH
Confidence 1122 45569999999999999999999999999999999999999999853 677774 9999999999986
Q ss_pred ccC
Q 029741 186 VNY 188 (188)
Q Consensus 186 ~~~ 188 (188)
++|
T Consensus 202 ~~~ 204 (234)
T 3m3h_A 202 TEV 204 (234)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 7
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.93 E-value=3.3e-26 Score=175.43 Aligned_cols=166 Identities=19% Similarity=0.194 Sum_probs=129.8
Q ss_pred CChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeE
Q 029741 10 GDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV 89 (188)
Q Consensus 10 ~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~ 89 (188)
.+|+ ++.+.+|.+|+||.+.-.|++...+..+++..+.+++.+++.+.. ++|+|++++.||+++|..+|..+++|+.
T Consensus 3 ~~~~--~~~~~~~~~~~~~~~~g~~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~ 79 (175)
T 1vch_A 3 TYPI--TVGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYV 79 (175)
T ss_dssp CEEE--EETTEEEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEE
T ss_pred ceeE--EecceeeEcCceEcCCCcEEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEE
Confidence 4453 688899999999987334799999999999999999999988865 7899999999999999999999999998
Q ss_pred EEeecCCC--CCcccchheeeecc-ceeEEEecCCC--CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741 90 PLRKPNKL--PGEVISEAYVLEYG-TDRLEMHVGAI--EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164 (188)
Q Consensus 90 ~~~k~~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~--~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~ 164 (188)
.+++..+. +.......++.+.+ .+.+.+..+.. .+|++||||||++|||+|+.++++.|+++|++++.+++++++
T Consensus 80 ~~rk~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~ 159 (175)
T 1vch_A 80 VARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQ 159 (175)
T ss_dssp EEBSSCCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred EEEecCCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEec
Confidence 77765432 12111111111111 12344432221 389999999999999999999999999999999999999998
Q ss_pred hhhhhccCCCCeEEEEecc
Q 029741 165 PEGQRRLDGKPLYILVEPR 183 (188)
Q Consensus 165 ~~~~~~l~~~~~~~l~~~~ 183 (188)
+.. +.|+++|..++
T Consensus 160 ~~~-----~~~~~sl~~~~ 173 (175)
T 1vch_A 160 GTP-----GLAVDTVAELP 173 (175)
T ss_dssp SCC-----SSCCEEEEECC
T ss_pred CCC-----CcceEEEEeec
Confidence 743 78999999876
No 8
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.93 E-value=1.2e-25 Score=180.84 Aligned_cols=143 Identities=22% Similarity=0.346 Sum_probs=123.0
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 109 (188)
..|+|+..++.+|+.++.+++.+++.+.+. ++|+|+|++.+|+++|..+|..|++|++++||..+.++..
T Consensus 68 p~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~-------- 139 (243)
T 3dez_A 68 PIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG-------- 139 (243)
T ss_dssp SEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-------------
T ss_pred CEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce--------
Confidence 679999999999999999999999999865 7999999999999999999999999999998876543321
Q ss_pred ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--hhhhccC--CCCeEEEEecccc
Q 029741 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLD--GKPLYILVEPRLS 185 (188)
Q Consensus 110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~--~~~~~~l~~~~~~ 185 (188)
..++ +...+|++||||||++|||+|+.++++.|+++|++++++++++++. .+.++++ |+++++|+++++.
T Consensus 140 ---~~ie---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~~dl 213 (243)
T 3dez_A 140 ---NQIE---GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSEL 213 (243)
T ss_dssp ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCHHHH
T ss_pred ---eEEE---eccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeHHHH
Confidence 1122 4557999999999999999999999999999999999999999985 3777775 9999999999986
Q ss_pred ccC
Q 029741 186 VNY 188 (188)
Q Consensus 186 ~~~ 188 (188)
++|
T Consensus 214 ~~~ 216 (243)
T 3dez_A 214 IKV 216 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 9
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.93 E-value=2.4e-24 Score=168.06 Aligned_cols=169 Identities=20% Similarity=0.302 Sum_probs=127.2
Q ss_pred hHHHHhhcccccCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 13 RLQGISKAIRVVPDFPIPGIMFQD-ITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 13 ~~~~~~~~~r~~~~~~~~g~~~~d-~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
+.+.|.+.-+..++ ++++.| +.+...+|..++.+++.+++.+...++|+|+|++.||+++|..+|..+++|+..+
T Consensus 7 l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~ 82 (197)
T 1y0b_A 7 LKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFA 82 (197)
T ss_dssp HHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEE
Confidence 44555555555555 455533 3334479999999999999999766789999999999999999999999999877
Q ss_pred eecCCCC--Ccccch-heeeecc-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--
Q 029741 92 RKPNKLP--GEVISE-AYVLEYG-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP-- 165 (188)
Q Consensus 92 ~k~~~~~--~~~~~~-~~~~~~~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~-- 165 (188)
++..+.+ +..... .++.+.+ ...+.+..+...+|++||||||++|||+|+.++++.|+++|++++.++++++++
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 162 (197)
T 1y0b_A 83 RKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQ 162 (197)
T ss_dssp BSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTS
T ss_pred EecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEeccc
Confidence 7665433 222111 1111111 124444433445899999999999999999999999999999999999999987
Q ss_pred hhhhccC--CCCeEEEEecccc
Q 029741 166 EGQRRLD--GKPLYILVEPRLS 185 (188)
Q Consensus 166 ~~~~~l~--~~~~~~l~~~~~~ 185 (188)
.++++|+ +.++++|+++++.
T Consensus 163 ~~~~~l~~~~~~~~sl~~~~~i 184 (197)
T 1y0b_A 163 PGRDELVKLGYRVESLARIQSL 184 (197)
T ss_dssp THHHHHHHTTCCEEEEEEEEEC
T ss_pred chhhhHHhcCCcEEEEEEEEEe
Confidence 3777886 7899999998863
No 10
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.92 E-value=1.9e-24 Score=178.22 Aligned_cols=169 Identities=21% Similarity=0.347 Sum_probs=128.1
Q ss_pred hHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741 13 RLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (188)
Q Consensus 13 ~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~ 92 (188)
+|+.|.+.++..+-+- +| .|.++..++.+|..++.+++.+++.+.+.++|+|+|++.+|+++|..+|..|++|+++++
T Consensus 83 ~~~~l~~~l~~~~~v~-~G-~f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~r 160 (291)
T 1o57_A 83 FVQTLGQSLANPERIL-PG-GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVR 160 (291)
T ss_dssp HHHHHHHHHTCGGGEE-TT-TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHHHHHCCCcc-cC-CeEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEE
Confidence 4555555554432211 23 256788999999999999999999998778899999999999999999999999998887
Q ss_pred ecCCC-CCcccchheeeec-c-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhh
Q 029741 93 KPNKL-PGEVISEAYVLEY-G-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR 169 (188)
Q Consensus 93 k~~~~-~~~~~~~~~~~~~-~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~ 169 (188)
|..+. ++.....++.... + ...+.+......+|++||||||++|||+|+.++++.|+++||+++++++++++.++++
T Consensus 161 k~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~~~ 240 (291)
T 1o57_A 161 KDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDE 240 (291)
T ss_dssp CC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCTT
T ss_pred EeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcccc
Confidence 66543 2222222221111 1 1245555444569999999999999999999999999999999999999999987655
Q ss_pred ccCCCCeEEEEeccc
Q 029741 170 RLDGKPLYILVEPRL 184 (188)
Q Consensus 170 ~l~~~~~~~l~~~~~ 184 (188)
++ +.|++||+++++
T Consensus 241 ~l-~~~~~SL~~~~~ 254 (291)
T 1o57_A 241 RL-VDEYMSLLTLST 254 (291)
T ss_dssp SC-CSCCEEEEEEEC
T ss_pred cc-CCceEEEEEEcc
Confidence 55 579999999876
No 11
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=1.5e-24 Score=166.95 Aligned_cols=141 Identities=22% Similarity=0.366 Sum_probs=119.0
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHH-hcC-CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRY-RDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~-~~~-~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 109 (188)
..|.|+..++.+|+..+.+++.+++.+ .+. ++|+|+|++.||+++|..+|..+++|+.+.++..+..+.
T Consensus 26 ~~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~g~--------- 96 (178)
T 2yzk_A 26 SVYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGHGT--------- 96 (178)
T ss_dssp EEEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSCC---------
T ss_pred CeEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccccCc---------
Confidence 569999999999999999999999988 654 689999999999999999999999999887665421110
Q ss_pred ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV 186 (188)
Q Consensus 110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~ 186 (188)
...+ .+. .+|++||||||++|||+|+.++++.|+++|++++.+++++++++ +.++++ ++|+++|+++++.+
T Consensus 97 --~~~i---~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~sl~~~~~~~ 170 (178)
T 2yzk_A 97 --LSQV---EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLVSVATLKTIL 170 (178)
T ss_dssp --CCCC---BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHH
T ss_pred --ccee---ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEEEEeeHHHHH
Confidence 0011 134 49999999999999999999999999999999999999999865 677775 89999999999865
Q ss_pred c
Q 029741 187 N 187 (188)
Q Consensus 187 ~ 187 (188)
+
T Consensus 171 ~ 171 (178)
T 2yzk_A 171 E 171 (178)
T ss_dssp H
T ss_pred H
Confidence 4
No 12
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.92 E-value=2.3e-24 Score=169.46 Aligned_cols=143 Identities=20% Similarity=0.371 Sum_probs=120.7
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhc--CCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~--~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 109 (188)
..|.|+..++.+|+..+.+++.+++.+.. .++|+|+|++.+|+++|..+|..+++|+.+.||..+..+.
T Consensus 30 ~~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~~g~--------- 100 (205)
T 2wns_A 30 PIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGT--------- 100 (205)
T ss_dssp EEEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTSSS---------
T ss_pred CEEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCccCc---------
Confidence 67899999999999999999999999875 4789999999999999999999999999887664421110
Q ss_pred ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEeccccc
Q 029741 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV 186 (188)
Q Consensus 110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~~ 186 (188)
...+ .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.. +.++++ |.|+++|+++++..
T Consensus 101 --~~~~---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~~~~~~ 175 (205)
T 2wns_A 101 --KRLV---EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKML 175 (205)
T ss_dssp --CCSE---ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHH
T ss_pred --cccc---cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEEEEEEHHHHH
Confidence 1112 144568999999999999999999999999999999999999999974 667774 89999999998755
Q ss_pred cC
Q 029741 187 NY 188 (188)
Q Consensus 187 ~~ 188 (188)
+|
T Consensus 176 ~~ 177 (205)
T 2wns_A 176 EI 177 (205)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 13
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.92 E-value=1.8e-24 Score=172.81 Aligned_cols=143 Identities=16% Similarity=0.227 Sum_probs=116.5
Q ss_pred CceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCccc
Q 029741 31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVI 102 (188)
Q Consensus 31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~ 102 (188)
+..|+|.. ++.+|..+..+++.+++.+.+. ++|+|+|++.+|+++|..+|..| ++|++++||..+..+.
T Consensus 49 Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g~-- 125 (232)
T 3mjd_A 49 SPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGE-- 125 (232)
T ss_dssp EEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC--------
T ss_pred cceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCCC--
Confidence 36889985 6789999999999999999764 68999999999999999999997 8999998876543221
Q ss_pred chheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hh--------hccC-
Q 029741 103 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQ--------RRLD- 172 (188)
Q Consensus 103 ~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~--------~~l~- 172 (188)
...+. +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ ++ +.+.
T Consensus 126 ---------~~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~~~~ 193 (232)
T 3mjd_A 126 ---------GGVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKISQD 193 (232)
T ss_dssp ----------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHHHHH
T ss_pred ---------CceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHHHHH
Confidence 01122 33459999999999999999999999999999999999999999876 33 3332
Q ss_pred -CCCeEEEEeccccccC
Q 029741 173 -GKPLYILVEPRLSVNY 188 (188)
Q Consensus 173 -~~~~~~l~~~~~~~~~ 188 (188)
|+|++||+++++.+.|
T Consensus 194 ~gv~v~sL~~~~~l~~~ 210 (232)
T 3mjd_A 194 FNIPVLAVTNFESIFEY 210 (232)
T ss_dssp HCCCEEEEEEHHHHHHH
T ss_pred cCCcEEEEEeHHHHHHH
Confidence 9999999999875543
No 14
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.92 E-value=3.4e-24 Score=165.36 Aligned_cols=141 Identities=24% Similarity=0.281 Sum_probs=115.2
Q ss_pred CceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheee
Q 029741 31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVL 108 (188)
Q Consensus 31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~ 108 (188)
+..|+|+..++.+|+..+.+++.+++.+.+.++|+|+|++.+|+++|..+|..++.|+ .++|+..+..+.
T Consensus 32 s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~~g~-------- 103 (180)
T 2p1z_A 32 ADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKKHGM-------- 103 (180)
T ss_dssp ---CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-CC---------
T ss_pred CCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEeccccccc--------
Confidence 3679999999999999999999999999877889999999999999999999999765 445543321110
Q ss_pred eccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhccC--CCCeEEEEecccc
Q 029741 109 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLS 185 (188)
Q Consensus 109 ~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l~--~~~~~~l~~~~~~ 185 (188)
...+. +...+|++||||||++|||+|+.++++.|+++|++++.+++++++++ ++++++ |+|++||+++++.
T Consensus 104 ---~~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~~l 177 (180)
T 2p1z_A 104 ---QRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRYILGLEDL 177 (180)
T ss_dssp ---CCSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEEEECSTTT
T ss_pred ---hhhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHHHh
Confidence 01121 34469999999999999999999999999999999999999999977 677774 8999999999874
No 15
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.91 E-value=9.6e-24 Score=183.29 Aligned_cols=165 Identities=20% Similarity=0.279 Sum_probs=134.2
Q ss_pred CCCCChhHHHHhhccc-ccCCCC-CCC---ceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHH
Q 029741 7 GLRGDPRLQGISKAIR-VVPDFP-IPG---IMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIA 81 (188)
Q Consensus 7 ~~~~~~~~~~~~~~~r-~~~~~~-~~g---~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA 81 (188)
-|.....++.+.+.-. ..+.|+ ..| ..|+|+..++.+|+.++.+++.+++.+.+.++|+|+|++.+|+++|..+|
T Consensus 256 ~~~~~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA 335 (453)
T 3qw4_B 256 KGASVELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAIS 335 (453)
T ss_dssp CSCCHHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHH
T ss_pred ccHHHHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHH
Confidence 3445555666665553 336777 344 57999999999999999999999999987789999999999999999999
Q ss_pred HHhCCCeEEEeecCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEE
Q 029741 82 LAIGAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 160 (188)
Q Consensus 82 ~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~ 160 (188)
..|++|++++||..+.. +.. .+ .+...+|++||||||++|||+|+.++++.|+++|++++++++
T Consensus 336 ~~L~~p~~~~rk~~k~~------------g~~~~i---~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~ 400 (453)
T 3qw4_B 336 NEMNVPLIYPRREAKIY------------GTKAAI---EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVV 400 (453)
T ss_dssp HHHCCCEEEESSCC-------------------CE---ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEE
T ss_pred HHhCCCEEEEEeecccc------------CcCceE---ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEE
Confidence 99999999988765421 111 12 144569999999999999999999999999999999999999
Q ss_pred EeeChh-hhhccC--CCCeEEEEeccccc
Q 029741 161 VVGLPE-GQRRLD--GKPLYILVEPRLSV 186 (188)
Q Consensus 161 l~~~~~-~~~~l~--~~~~~~l~~~~~~~ 186 (188)
++++.. ++++++ |+|++||+++++.+
T Consensus 401 lvdr~~~g~~~l~~~g~~v~sL~~~~dl~ 429 (453)
T 3qw4_B 401 LVDRDMGAKAFLNKLGYDFEAVVGLHQLL 429 (453)
T ss_dssp EEECSSSHHHHHHHTTCCEEEEEEHHHHH
T ss_pred EEECCcchHHHHHhcCCCEEEEeEHHHHH
Confidence 999976 677774 99999999999854
No 16
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.91 E-value=9.1e-24 Score=167.03 Aligned_cols=140 Identities=17% Similarity=0.299 Sum_probs=117.0
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCcccc
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVIS 103 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~~ 103 (188)
..|+| ..++.+|+.++.+++.+++++.+. ++|+|+|++.+|+++|..+|..| ++|++++||..+.++.
T Consensus 32 ~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~--- 107 (213)
T 1lh0_A 32 PYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE--- 107 (213)
T ss_dssp EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT---
T ss_pred cEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCC---
Confidence 67889 578899999999999999999753 68999999999999999999999 8999888775542221
Q ss_pred hheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhhcc---------CC
Q 029741 104 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL---------DG 173 (188)
Q Consensus 104 ~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~~l---------~~ 173 (188)
...+. +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ +++++ .|
T Consensus 108 --------~~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g 175 (213)
T 1lh0_A 108 --------GGSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYG 175 (213)
T ss_dssp --------CSSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHC
T ss_pred --------CCcee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcC
Confidence 01122 234589 9999999999999999999999999999999999999987 55555 48
Q ss_pred CCeEEEEecccccc
Q 029741 174 KPLYILVEPRLSVN 187 (188)
Q Consensus 174 ~~~~~l~~~~~~~~ 187 (188)
+|++||+++++..+
T Consensus 176 ~~v~sl~~~~~l~~ 189 (213)
T 1lh0_A 176 CKVISIITLKDLIA 189 (213)
T ss_dssp CEEEEEEEHHHHHH
T ss_pred CCeEEEEEHHHHHH
Confidence 99999999997544
No 17
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.90 E-value=1.3e-23 Score=168.20 Aligned_cols=141 Identities=19% Similarity=0.311 Sum_probs=114.5
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh------CCCeEEEeecCCCCCcccc
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEVIS 103 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l------~~p~~~~~k~~~~~~~~~~ 103 (188)
..|+|. .++.+|..++.+++.+++.+.+. ++|+|+|++.+|+++|..+|..| ++|++++||..+.++.
T Consensus 57 p~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~--- 132 (238)
T 3n2l_A 57 PYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGE--- 132 (238)
T ss_dssp EEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC---------
T ss_pred cEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCC---
Confidence 688997 57799999999999999999754 79999999999999999999997 8999998887653322
Q ss_pred hheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhh------cc---CC
Q 029741 104 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR------RL---DG 173 (188)
Q Consensus 104 ~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~------~l---~~ 173 (188)
...+. +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ +++ ++ .|
T Consensus 133 --------~~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~G 200 (238)
T 3n2l_A 133 --------GGNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFG 200 (238)
T ss_dssp ----------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHC
T ss_pred --------CceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcC
Confidence 11222 334589 9999999999999999999999999999999999999875 222 23 29
Q ss_pred CCeEEEEeccccccC
Q 029741 174 KPLYILVEPRLSVNY 188 (188)
Q Consensus 174 ~~~~~l~~~~~~~~~ 188 (188)
+|++||+++++.+.|
T Consensus 201 v~v~SL~~~~~l~~~ 215 (238)
T 3n2l_A 201 CAVISIVSLTDLITY 215 (238)
T ss_dssp CEEEEEEEHHHHHHH
T ss_pred CCEEEEEEHHHHHHH
Confidence 999999999886543
No 18
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.90 E-value=3.1e-23 Score=165.33 Aligned_cols=142 Identities=18% Similarity=0.268 Sum_probs=117.0
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHh---------CCCeEEEeecCCCCCc
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI---------GAKFVPLRKPNKLPGE 100 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l---------~~p~~~~~k~~~~~~~ 100 (188)
..|+| ..++.+|+.++.+++.|++.+.+. ++|+|++|+.+|+++|..+|..| ++|+.+.++.++..
T Consensus 36 ~~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~-- 112 (226)
T 2ps1_A 36 PYFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDH-- 112 (226)
T ss_dssp EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESS--
T ss_pred CEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhc--
Confidence 67888 468899999999999999999753 68999999999999999999999 99998887754321
Q ss_pred ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh-hhh----c-----
Q 029741 101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR----R----- 170 (188)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~-~~~----~----- 170 (188)
+...+.. +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ +++ +
T Consensus 113 ----------g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~~ 180 (226)
T 2ps1_A 113 ----------GEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQ 180 (226)
T ss_dssp ----------TTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHHH
T ss_pred ----------CCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHHH
Confidence 1222222 23359999999999999999999999999999999999999999986 332 1
Q ss_pred ----cCCCCeEEEEeccccccC
Q 029741 171 ----LDGKPLYILVEPRLSVNY 188 (188)
Q Consensus 171 ----l~~~~~~~l~~~~~~~~~ 188 (188)
..|+|++||+++++.++|
T Consensus 181 ~~~~~~g~~v~sl~~~~~l~~~ 202 (226)
T 2ps1_A 181 TVSKKYGIPVLSIVSLIHIITY 202 (226)
T ss_dssp HHHHHHTCCEEEEEEHHHHHHH
T ss_pred HHHHhcCCeEEEEecHHHHHHH
Confidence 349999999999986543
No 19
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.89 E-value=7.5e-23 Score=161.42 Aligned_cols=139 Identities=24% Similarity=0.363 Sum_probs=116.9
Q ss_pred ceEEechhhhcCHHHHHHHHHHHHHHHhcC--CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeee
Q 029741 32 IMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 32 ~~~~d~~~ll~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 109 (188)
..|+|+..++.+|...+.+++.+++++... ++|+|+|++.||+++|..+|..+++|+.+++|.++.++.
T Consensus 36 ~~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~--------- 106 (211)
T 2aee_A 36 PIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGA--------- 106 (211)
T ss_dssp SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC-------------
T ss_pred CeEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCC---------
Confidence 478999999999999999999999988653 679999999999999999999999999888776542221
Q ss_pred ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--hhhhccC--CCCeEEEEeccc
Q 029741 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLD--GKPLYILVEPRL 184 (188)
Q Consensus 110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~--~~~~~~l~~~~~ 184 (188)
...+. +...+|++||||||++|||+|+.++++.|+++|+++++++++++++ ++.+++. +++++++.++.+
T Consensus 107 --~~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~ 180 (211)
T 2aee_A 107 --GNQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTE 180 (211)
T ss_dssp --CCSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHH
T ss_pred --cceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHH
Confidence 01222 3446999999999999999999999999999999999999999985 3777775 889999988754
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.85 E-value=3.3e-20 Score=145.53 Aligned_cols=153 Identities=17% Similarity=0.214 Sum_probs=113.5
Q ss_pred cCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCC
Q 029741 24 VPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLP 98 (188)
Q Consensus 24 ~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~ 98 (188)
-|.||.+|++..|+..++.+++.++..++.|++++.+. ++++|+|++.||+.+|..+|..|++|+ .++++.+...
T Consensus 17 ~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~~ 96 (204)
T 3hvu_A 17 NLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGH 96 (204)
T ss_dssp --CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSG
T ss_pred CCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEecC
Confidence 37899999998899999999999999999999888642 578999999999999999999999985 3444432111
Q ss_pred CcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEE
Q 029741 99 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYI 178 (188)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~ 178 (188)
+. . ..+...+........+||+||||||+++||+|+.++++.|+++|++++.++++++++.++ .+.-.+=+.
T Consensus 97 ~~-~------~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~-~~~~~~Dy~ 168 (204)
T 3hvu_A 97 ST-V------STGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGR-KVDLKADYV 168 (204)
T ss_dssp GG-T------TSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGC-SSCCCCSEE
T ss_pred CC-c------cCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCC-cCCCCCCEE
Confidence 00 0 001112221112235899999999999999999999999999999999999999998654 233223344
Q ss_pred EEeccc
Q 029741 179 LVEPRL 184 (188)
Q Consensus 179 l~~~~~ 184 (188)
-+++++
T Consensus 169 g~~ipd 174 (204)
T 3hvu_A 169 GFTVPH 174 (204)
T ss_dssp EEECCS
T ss_pred EEEcCC
Confidence 555554
No 21
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.83 E-value=6.2e-20 Score=137.40 Aligned_cols=138 Identities=14% Similarity=0.239 Sum_probs=100.9
Q ss_pred hhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeE-EEeecCCCCCcccchheeeeccceeEEEe
Q 029741 40 LLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV-PLRKPNKLPGEVISEAYVLEYGTDRLEMH 118 (188)
Q Consensus 40 ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (188)
++.+++.+..+++.|++++.+.++|+|++++.||+++|..+|..+++|+. .+++....... . ......+...
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~ 76 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGID------E-RGEKPVITIP 76 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--------C-CCSSCEEEEC
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCc------c-cccceeEecc
Confidence 45677888888999998886557899999999999999999999999965 34332211100 0 0011123332
Q ss_pred cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccccccC
Q 029741 119 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY 188 (188)
Q Consensus 119 ~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~~~~~ 188 (188)
.....+|++||||||++|||+|+.++++.|+++|++++.+++++.++..... |=+.-.++++|+-|
T Consensus 77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~~~~----~dy~g~~~~~~~vf 142 (153)
T 1vdm_A 77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVV----PDYYVFRTEKWIVF 142 (153)
T ss_dssp CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTCSSC----CSBBCEECSSEEEC
T ss_pred CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCCC----ceEEEEecCCeEEe
Confidence 2334689999999999999999999999999999999999999999864322 33444556666544
No 22
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.82 E-value=1.3e-19 Score=139.83 Aligned_cols=146 Identities=13% Similarity=0.180 Sum_probs=104.3
Q ss_pred CceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchh
Q 029741 31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEA 105 (188)
Q Consensus 31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~ 105 (188)
..++.|+..++.+++.+...+..|++++.+. ++++|++++.||+++|..+|..|++|+.. ++.... ...
T Consensus 4 ~~~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~y-~~~----- 77 (183)
T 1hgx_A 4 TPMMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSY-SGT----- 77 (183)
T ss_dssp ---CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC----------
T ss_pred CCcCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEec-CCc-----
Confidence 3456788889999999999999999888642 68899999999999999999999999653 221111 110
Q ss_pred eeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 106 YVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 106 ~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
. ..+...+........+||+||||||+++||+|+.++++.|+++|++++.+++++.++.+...+.-.+=+.-+++++
T Consensus 78 ~--~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~~~~~d~~g~~~p~ 154 (183)
T 1hgx_A 78 K--STGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAYDVPIDYCGFVVEN 154 (183)
T ss_dssp -------CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSSCCCCSEEEEEECS
T ss_pred c--cccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccCCCCCCEEEEEeCC
Confidence 0 0111122221122368999999999999999999999999999999999999999876444554223344445554
No 23
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.81 E-value=7.6e-20 Score=146.34 Aligned_cols=137 Identities=20% Similarity=0.182 Sum_probs=106.8
Q ss_pred cccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhCC------------
Q 029741 22 RVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGA------------ 86 (188)
Q Consensus 22 r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~~------------ 86 (188)
.....||.+++++.|+..++.+++.+...++.|++++.+ .++++|+|++.||+++|..+|+.|+.
T Consensus 30 ~~~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~ 109 (233)
T 1fsg_A 30 YNADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVP 109 (233)
T ss_dssp EEGGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSC
T ss_pred CccccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCC
Confidence 455788989988889999999999999999999988864 36889999999999999999999987
Q ss_pred Ce--EEEeecCCCCCcccchheeeeccceeEEEecC--CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741 87 KF--VPLRKPNKLPGEVISEAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162 (188)
Q Consensus 87 p~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~ 162 (188)
|+ .+++... |..+.++..+.+... ...+||+||||||+++||+|+.++++.|+++|++++.+++++
T Consensus 110 P~~~~~i~~~~----------y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~ 179 (233)
T 1fsg_A 110 PFFEHYVRLKS----------YQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLV 179 (233)
T ss_dssp SCEEEEEEEEE----------EETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEE
T ss_pred CcEEEEEEEEe----------ccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEE
Confidence 52 2222211 110111122232211 235899999999999999999999999999999999999999
Q ss_pred eChhhh
Q 029741 163 GLPEGQ 168 (188)
Q Consensus 163 ~~~~~~ 168 (188)
+++..+
T Consensus 180 ~k~~~~ 185 (233)
T 1fsg_A 180 EKRTDR 185 (233)
T ss_dssp EECCTT
T ss_pred ECCccc
Confidence 987643
No 24
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.79 E-value=2.5e-18 Score=132.87 Aligned_cols=140 Identities=16% Similarity=0.154 Sum_probs=100.0
Q ss_pred chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheeeecc
Q 029741 37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYG 111 (188)
Q Consensus 37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~ 111 (188)
+..++.+++.+...+..|++++.+. ++++|++++.||+++|..+|..|++|+ .++++....... . ..+
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~---~----~~~ 84 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSST---K----SSG 84 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTH---H----HHC
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCC---c----cCc
Confidence 4456788888888888888888642 578999999999999999999999986 334322211110 0 001
Q ss_pred ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
...+........+|++||||||+++||+|+.++++.|+++|++++.+++++++++++ .+.-.+=+.-+++++
T Consensus 85 ~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~-~~~~~~d~~g~~~p~ 156 (185)
T 2geb_A 85 IVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR-EADVKVDYCGFKIPD 156 (185)
T ss_dssp CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-CSCCCCSEEEEECCS
T ss_pred cEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcc-cCCCCCCEEEEEcCC
Confidence 111211112236899999999999999999999999999999999999999998754 243223344445554
No 25
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.78 E-value=8.1e-19 Score=138.95 Aligned_cols=136 Identities=15% Similarity=0.197 Sum_probs=103.9
Q ss_pred cccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhC---------CCe-
Q 029741 22 RVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF- 88 (188)
Q Consensus 22 r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~---------~p~- 88 (188)
...++||.+|+++.|+..++.+++.++...+.|++++.. .+.++|+|++.||+++|..+|+.|+ +|+
T Consensus 16 ~~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~ 95 (217)
T 1z7g_A 16 YDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMT 95 (217)
T ss_dssp BCGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEE
T ss_pred CcccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEee
Confidence 345689999998999999999999999999999988863 3678999999999999999999998 564
Q ss_pred -EEEeecCCCCCcccchheeeeccceeEEEec---CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeC
Q 029741 89 -VPLRKPNKLPGEVISEAYVLEYGTDRLEMHV---GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 164 (188)
Q Consensus 89 -~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~ 164 (188)
.+++..... . +.....+.+.. ....+||+||||||+++||+|+.++++.|+++|++++.+++++.+
T Consensus 96 ~~~i~~~~y~-~---------~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k 165 (217)
T 1z7g_A 96 VDFIRLKSYC-N---------DQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVK 165 (217)
T ss_dssp EEEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEE
T ss_pred eeeEEEEEec-c---------cccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEEC
Confidence 333321110 0 00111111111 123589999999999999999999999999999999999999997
Q ss_pred hhh
Q 029741 165 PEG 167 (188)
Q Consensus 165 ~~~ 167 (188)
++.
T Consensus 166 ~~~ 168 (217)
T 1z7g_A 166 RTP 168 (217)
T ss_dssp CC-
T ss_pred ccc
Confidence 754
No 26
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.78 E-value=1.7e-18 Score=137.83 Aligned_cols=151 Identities=16% Similarity=0.225 Sum_probs=108.0
Q ss_pred CCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc---CCCcEEEEeCCCChhhHHHHHHHhC---------CCe--EE
Q 029741 25 PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF--VP 90 (188)
Q Consensus 25 ~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~gG~~~a~~lA~~l~---------~p~--~~ 90 (188)
..||.+++++.|+..++.+++.+...+..|++++.+ .++++|+|++.||+++|..+|..|+ +|+ .+
T Consensus 27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~ 106 (225)
T 2jbh_A 27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF 106 (225)
T ss_dssp GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence 467788887778899999999999999999988864 3678999999999999999999998 674 33
Q ss_pred EeecCCCCCcccchheeeeccceeEEEecC-CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhh
Q 029741 91 LRKPNKLPGEVISEAYVLEYGTDRLEMHVG-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR 169 (188)
Q Consensus 91 ~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~ 169 (188)
++.... ... + ..+...+..... ...+||+||||||+++||+|+.++++.|+++|++++.+++++.++..+
T Consensus 107 i~~~~y-~~~-----~--~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~~- 177 (225)
T 2jbh_A 107 IRLKSY-RND-----Q--SMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTSR- 177 (225)
T ss_dssp EEEC------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-C-
T ss_pred EEEEec-cCc-----c--ccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccc-
Confidence 443221 110 0 001111211001 235899999999999999999999999999999999999999977643
Q ss_pred ccCCCCeEEEEeccc
Q 029741 170 RLDGKPLYILVEPRL 184 (188)
Q Consensus 170 ~l~~~~~~~l~~~~~ 184 (188)
.+.-.+-+.-+++++
T Consensus 178 ~~~~~~dy~g~~ip~ 192 (225)
T 2jbh_A 178 SDGFRPDYAGFEIPN 192 (225)
T ss_dssp CSCCCCSEEEEEECS
T ss_pred cCCCCccEEEEECCC
Confidence 333223344455544
No 27
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.78 E-value=5.6e-18 Score=131.13 Aligned_cols=144 Identities=15% Similarity=0.182 Sum_probs=103.3
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchhee
Q 029741 33 MFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYV 107 (188)
Q Consensus 33 ~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~ 107 (188)
+..|+..++.+++.++..++.|++++.+. ++++|+|++.||+.+|..+|..|++|+. +++..+...+..
T Consensus 4 ~~~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~~~------ 77 (186)
T 3o7m_A 4 MNIEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTE------ 77 (186)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC----------
T ss_pred ccccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCCCc------
Confidence 34467788999999999999998887642 5789999999999999999999999863 344322111100
Q ss_pred eeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 108 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 108 ~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
..+.-.+........+|++||||||+++||+|+.++++.|+++|++++.++++++++.+++ +.-.+-+.-+++++
T Consensus 78 -~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~~-~~i~~dy~G~~ip~ 152 (186)
T 3o7m_A 78 -TTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRK-VDLTAEYVGFQIPD 152 (186)
T ss_dssp ----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGCS-SCCCCSEEEEECCC
T ss_pred -ccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCCc-CCCCCCEEEEEcCC
Confidence 0111122211123358999999999999999999999999999999999999999986542 33223444555554
No 28
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.77 E-value=3.7e-18 Score=134.62 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=99.5
Q ss_pred CceEEechhhhcCHHHHHHHHHHHHHHHhc---------CCCcEEEEeCCCChhhHHHHHHHh---CCCe--EEEeecCC
Q 029741 31 GIMFQDITTLLLDHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNK 96 (188)
Q Consensus 31 g~~~~d~~~ll~~~~~~~~l~~~la~~~~~---------~~~d~Iv~v~~gG~~~a~~lA~~l---~~p~--~~~~k~~~ 96 (188)
.+.+.|+..++.+++.+...+..|++++.+ .++++|+|++.||+++|..+|..| ++|+ .++++.+.
T Consensus 17 ~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y 96 (211)
T 1pzm_A 17 RRNYPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSY 96 (211)
T ss_dssp ---CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC--
T ss_pred cccccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeec
Confidence 344567888889999988888888877653 357899999999999999999999 9994 34443221
Q ss_pred CCCcccchheeeeccceeEEEe--cCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCC
Q 029741 97 LPGEVISEAYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGK 174 (188)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~ 174 (188)
.... +. ...+.+. .....+||+||||||+++||+|+.++++.|+++|++++.+++++++++++ .+.-.
T Consensus 97 ~~~~--------~~-~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~~-~~~~~ 166 (211)
T 1pzm_A 97 GSGV--------ET-SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSGR-KVDVL 166 (211)
T ss_dssp --------------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-SSCCC
T ss_pred cCcc--------cc-CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCccC-cCCCC
Confidence 1000 00 0011111 12235899999999999999999999999999999999999999998753 33322
Q ss_pred CeEEEEeccc
Q 029741 175 PLYILVEPRL 184 (188)
Q Consensus 175 ~~~~l~~~~~ 184 (188)
+-+.-+++++
T Consensus 167 ~d~~g~~ip~ 176 (211)
T 1pzm_A 167 VDYPVITIPR 176 (211)
T ss_dssp CSEEEEECCS
T ss_pred CCEEEEECCC
Confidence 3344444443
No 29
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.76 E-value=1.6e-17 Score=131.73 Aligned_cols=141 Identities=15% Similarity=0.176 Sum_probs=97.9
Q ss_pred echhhhcCHHHHHHHHHHHHHHHhcC---CC-------cEEEEeCCCChhhHHHHHHHh---CCCe--EEEeecCCCCCc
Q 029741 36 DITTLLLDHKAFKDTVDIFVDRYRDM---GI-------SVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNKLPGE 100 (188)
Q Consensus 36 d~~~ll~~~~~~~~l~~~la~~~~~~---~~-------d~Iv~v~~gG~~~a~~lA~~l---~~p~--~~~~k~~~~~~~ 100 (188)
|+..++.+++.+...++.|++++... +. ++|+|++.||+++|..+|..| ++|+ .+++..+.....
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~ 85 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL 85 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence 46667788888888888888777532 23 899999999999999999999 9995 344432211110
Q ss_pred ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEE
Q 029741 101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILV 180 (188)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~ 180 (188)
. ..+.-.+........+||+||||||+++||+|+.++++.|+++|+++|.+++++.++.++ .+.-.+-+.-+
T Consensus 86 -----~--~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~~-~~~~~~dy~g~ 157 (220)
T 1tc1_A 86 -----T--SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGR-RVPFSADYVVA 157 (220)
T ss_dssp ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTCC-SSCCCCSEEEE
T ss_pred -----c--cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCccC-cCCCCCCEEEE
Confidence 0 001111211112235899999999999999999999999999999999999999998653 33322333344
Q ss_pred eccc
Q 029741 181 EPRL 184 (188)
Q Consensus 181 ~~~~ 184 (188)
++++
T Consensus 158 ~ip~ 161 (220)
T 1tc1_A 158 NIPN 161 (220)
T ss_dssp ECCS
T ss_pred ECCc
Confidence 4444
No 30
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.76 E-value=6.2e-18 Score=132.62 Aligned_cols=140 Identities=16% Similarity=0.154 Sum_probs=99.3
Q ss_pred chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheeeecc
Q 029741 37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYG 111 (188)
Q Consensus 37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~ 111 (188)
+..++.+++.+...+..|++++.+. ++++|+|++.||+++|..+|..|++|+ .++++.+.. ... . ..+
T Consensus 32 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~-~~~--~----~~~ 104 (205)
T 1yfz_A 32 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYG-SST--K----SSG 104 (205)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECS-HHH--H----HHC
T ss_pred cceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEecc-CCc--c----ccc
Confidence 4446788888888888888887642 588999999999999999999999996 334322211 000 0 001
Q ss_pred ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
...+........+|++||||||+++||+|+.++++.|+++|++++.+++++++++++ .+.-.+=+.-+++++
T Consensus 105 ~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~-~~~~~~d~~g~~~p~ 176 (205)
T 1yfz_A 105 IVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR-EADVKVDYCGFKIPD 176 (205)
T ss_dssp CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-CSCCCCSEEEEECCS
T ss_pred eEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccc-cCCCCCCEEEEEcCC
Confidence 111211112236899999999999999999999999999999999999999998754 243223344445554
No 31
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.74 E-value=5.4e-17 Score=125.10 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=95.9
Q ss_pred hhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeE--EEeecCCCCCcccchheeeecccee
Q 029741 40 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR 114 (188)
Q Consensus 40 ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~ 114 (188)
++.+++.++..++.|++++.+. ++++|+|++.||+.+|..+|..|++|+. +++......... ..+...
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~~~~~-------~~~~v~ 84 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFK-------SSGEVE 84 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEecCCcc-------ccCcEE
Confidence 5678888888888888777542 5789999999999999999999999863 344322111100 011112
Q ss_pred EEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 115 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 115 ~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
+........+||+||||||+++||+|+.++++.|+++|++++.++++++++.++ .+.-.+=+.-+++++
T Consensus 85 i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~-~~~~~~d~~g~~ip~ 153 (181)
T 2ywu_A 85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRR-QVEVPIHYLGFEIED 153 (181)
T ss_dssp EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-SSCCCCSEEEEECCS
T ss_pred EEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCCCc-cCCCCCCEEEEEcCC
Confidence 221112336999999999999999999999999999999999999999998654 333223344555555
No 32
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.74 E-value=1.9e-17 Score=133.33 Aligned_cols=142 Identities=16% Similarity=0.189 Sum_probs=101.8
Q ss_pred CCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcc-
Q 029741 27 FPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV- 101 (188)
Q Consensus 27 ~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~- 101 (188)
|..+..++.|+..++.+++.++...+.|++++.+. +.++|+|++.||+.+|..+|..|+.+++. +||..+.+.++
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 34445677788999999999999999998877532 57899999999999999999999832211 11111111110
Q ss_pred -c-chheeeeccceeEEEecCC--CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741 102 -I-SEAYVLEYGTDRLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 168 (188)
Q Consensus 102 -~-~~~~~~~~~~~~~~l~~~~--~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~ 168 (188)
+ ..+|..+++...+.+..+. ..+|++||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r 199 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPL 199 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTT
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccc
Confidence 0 0112222223334443222 24899999999999999999999999999999999999999998643
No 33
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.73 E-value=4.5e-17 Score=125.09 Aligned_cols=141 Identities=16% Similarity=0.203 Sum_probs=93.7
Q ss_pred chhhhcCHHHHHHHHHHHHHHHhcC----CCcEEEEeCCCChhhHHHHHHHhC----CC--eEEEeecCCCCCcccchhe
Q 029741 37 ITTLLLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AK--FVPLRKPNKLPGEVISEAY 106 (188)
Q Consensus 37 ~~~ll~~~~~~~~l~~~la~~~~~~----~~d~Iv~v~~gG~~~a~~lA~~l~----~p--~~~~~k~~~~~~~~~~~~~ 106 (188)
...++.+++.+...+..|++++... ++++|+|++.||+++|..+|..|+ +| +.++.+........ ..
T Consensus 3 ~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~---~~ 79 (181)
T 1a3c_A 3 QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLS---KK 79 (181)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC---------
T ss_pred cccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCccc---cc
Confidence 4456778888888888888887542 578999999999999999999997 44 34444322111100 00
Q ss_pred eeec-c-ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeChhhhhccCCCCeEEEEecc
Q 029741 107 VLEY-G-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPEGQRRLDGKPLYILVEPR 183 (188)
Q Consensus 107 ~~~~-~-~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~ 183 (188)
.... . ...+.+ ....+|++||||||++|||+|+.++++.|+++| ++++.++++++++. ....-.+-+.-++++
T Consensus 80 ~~~~~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~~--~~~~~~~dy~g~~ip 155 (181)
T 1a3c_A 80 TSNDEPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGH--RELPIRADYIGKNIP 155 (181)
T ss_dssp --CCCCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC--CSSSCCCSEEEEECC
T ss_pred Cccceeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--CcCCCCccEEEEECC
Confidence 0000 0 011111 223689999999999999999999999999997 99999999998862 222212344445555
Q ss_pred c
Q 029741 184 L 184 (188)
Q Consensus 184 ~ 184 (188)
+
T Consensus 156 ~ 156 (181)
T 1a3c_A 156 T 156 (181)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.73 E-value=2.7e-17 Score=123.34 Aligned_cols=113 Identities=20% Similarity=0.278 Sum_probs=86.0
Q ss_pred hhcCHHHHHHHHHHHHHHHhc-CCCcEEEEeCCCChhhHHHHHHHhCCC-eEEEeecCCCCCcccchheeeeccceeEEE
Q 029741 40 LLLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-FVPLRKPNKLPGEVISEAYVLEYGTDRLEM 117 (188)
Q Consensus 40 ll~~~~~~~~l~~~la~~~~~-~~~d~Iv~v~~gG~~~a~~lA~~l~~p-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l 117 (188)
.+.+++.+...+..|++++.. .++++|+|++.||+.+|..+|+.|++| +.+++.... ... ..+. +.+
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y-~~~--------~~~~--~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY-DHD--------NQRE--LKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe-cCc--------ccce--EEE
Confidence 467888899999999999875 357899999999999999999999999 665543321 100 0111 122
Q ss_pred ecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhh
Q 029741 118 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 168 (188)
Q Consensus 118 ~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~ 168 (188)
..+...+||+||||||+++||+|+.++++.|++ +.++++++++..+
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~~ 119 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGR 119 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGG
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCCc
Confidence 222235999999999999999999999999986 7889999998543
No 35
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.73 E-value=1.4e-16 Score=122.37 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=95.3
Q ss_pred hhhcCHHHHHHHHHHHHHHHhcC---CC-cEEEEeCCCChhhHHHHHHHhCCCe--EEEeecCCCCCcccchheeeeccc
Q 029741 39 TLLLDHKAFKDTVDIFVDRYRDM---GI-SVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGT 112 (188)
Q Consensus 39 ~ll~~~~~~~~l~~~la~~~~~~---~~-d~Iv~v~~gG~~~a~~lA~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~~ 112 (188)
.++.+++.++..++.|++++.+. +. ++|+|++.||+.+|..+|..|++|+ .+++....-... . ..+.
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~-----~--~~~~ 78 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSM-----Q--SSRD 78 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CC
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCC-----c--cCCc
Confidence 34667888888888888777532 24 7999999999999999999999986 344433211110 0 0111
Q ss_pred eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 113 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 113 ~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
..+........+||+||||||+++||+|+.++++.|+++|++++.++++++++.++ .+.-.+=+.-+++++
T Consensus 79 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~~-~~~~~~d~~g~~~p~ 149 (177)
T 3ohp_A 79 VRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTRR-EVDVEVNWVGFEIPD 149 (177)
T ss_dssp CCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC-SSCCCCSEEEEECCS
T ss_pred EEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCccc-cCCCCccEEEEEcCC
Confidence 12222112235899999999999999999999999999999999999999998643 333122244445554
No 36
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.72 E-value=1.1e-16 Score=131.42 Aligned_cols=116 Identities=22% Similarity=0.323 Sum_probs=93.0
Q ss_pred HHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEe-cCCCCCCCEEEEEc
Q 029741 54 FVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAIEPGERALVID 132 (188)
Q Consensus 54 la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~Gk~VLIVD 132 (188)
|++++.+.+.++|++++.||+.+|..+|..|++|+.+++|.++.++ .+.+. .....+||+|+|||
T Consensus 145 la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vliVD 210 (286)
T 3lrt_A 145 IVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLIVD 210 (286)
T ss_dssp HHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEEEE
T ss_pred HHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEEEe
Confidence 3444444577899999999999999999999999998887653221 11211 12235999999999
Q ss_pred CcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741 133 DLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 133 Dvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~ 184 (188)
|+++||+|+.++++.|+++|+++++++++|+... +.++| ..++..++..+.
T Consensus 211 Dii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~vv~Tnt 263 (286)
T 3lrt_A 211 DIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEIHVTDT 263 (286)
T ss_dssp EEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEEEEESS
T ss_pred ccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEEEEecC
Confidence 9999999999999999999999999999999754 67788 778888887765
No 37
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.71 E-value=1e-16 Score=125.88 Aligned_cols=122 Identities=27% Similarity=0.425 Sum_probs=83.1
Q ss_pred CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCC------------Ccc-cc--------hheee-----e---c
Q 029741 62 GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLP------------GEV-IS--------EAYVL-----E---Y 110 (188)
Q Consensus 62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~------------~~~-~~--------~~~~~-----~---~ 110 (188)
+.++|++++.||+++|..+|..|++|+.. ++|.++.. +.. +. +.+-. . .
T Consensus 23 ~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 102 (208)
T 1wd5_A 23 EAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLEREAARQRDVL 102 (208)
T ss_dssp CSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999865 45443211 100 00 00000 0 0
Q ss_pred cc--eeEE-EecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCC-CeEEEEecc
Q 029741 111 GT--DRLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGK-PLYILVEPR 183 (188)
Q Consensus 111 ~~--~~~~-l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~-~~~~l~~~~ 183 (188)
.. ..+. .......+||+||||||+++||+|+.++++.|+++|+++|.+++++..+++.++|... .+..+.+.+
T Consensus 103 ~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~~~~~l~~~~~~v~~~~~~ 179 (208)
T 1wd5_A 103 RKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKARAEVVALSVPQ 179 (208)
T ss_dssp HHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHHTTSEEEEEECCT
T ss_pred HHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHHHHHHhcccCcEEEEecCc
Confidence 00 0000 0011235899999999999999999999999999999999999999998776666422 565655543
No 38
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=2.3e-16 Score=121.27 Aligned_cols=121 Identities=17% Similarity=0.148 Sum_probs=84.7
Q ss_pred hhcCHHHHHHHHHHHHHHHhc----CCCcEEEEeCCCChhhHHHHHHHhC----CCeE--EEeecCCCCCcccchheeee
Q 029741 40 LLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 40 ll~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~gG~~~a~~lA~~l~----~p~~--~~~k~~~~~~~~~~~~~~~~ 109 (188)
++.+++.+......|++++.. .+.++|+|++.+|+++|..+|..++ +|+. .+++....... . .....
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~-~--~~~~~ 82 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDL-T--EIGYR 82 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCcc-c--ccccc
Confidence 456777777777777776643 2467999999999999999999987 7763 34332211000 0 00000
Q ss_pred ccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeCh
Q 029741 110 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 165 (188)
Q Consensus 110 ~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~ 165 (188)
.....+.+ ....+|++||||||++|||+|+.++++.|+++| ++++.++++++++
T Consensus 83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 00011222 223589999999999999999999999999999 9999999999987
No 39
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.67 E-value=1.7e-16 Score=130.27 Aligned_cols=121 Identities=21% Similarity=0.316 Sum_probs=89.8
Q ss_pred HHHHHHHHhc-CCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEE
Q 029741 51 VDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERAL 129 (188)
Q Consensus 51 ~~~la~~~~~-~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VL 129 (188)
+..|++++.+ .+.++|++++.||+.+|..+|..+++|+.+++|+++.+. ...+.+. +...+||+|+
T Consensus 143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~Vl 209 (284)
T 1u9y_A 143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVF 209 (284)
T ss_dssp HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEE
Confidence 3444444443 356799999999999999999999999988776653211 0111121 2236999999
Q ss_pred EEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741 130 VIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 130 IVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~ 184 (188)
||||+++||+|+.++++.|+++|++++.++++|.... +.++++..+++.++..+.
T Consensus 210 IVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~vv~t~t 266 (284)
T 1u9y_A 210 IVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDT 266 (284)
T ss_dssp EEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEEEETT
T ss_pred EEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEEEEeCC
Confidence 9999999999999999999999999999999987643 677787556888887765
No 40
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.66 E-value=7.6e-16 Score=122.17 Aligned_cols=128 Identities=13% Similarity=0.145 Sum_probs=89.0
Q ss_pred hhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCC------CeEEEeecCCCCCcccchheeeeccc
Q 029741 39 TLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA------KFVPLRKPNKLPGEVISEAYVLEYGT 112 (188)
Q Consensus 39 ~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~------p~~~~~k~~~~~~~~~~~~~~~~~~~ 112 (188)
.++.+.+.+...++.|++++.+.++++|+|++.||+++|..||..|++ |+.++....+........ .....+.
T Consensus 6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~-~~~~~g~ 84 (221)
T 2xbu_A 6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGS-EVEEVGV 84 (221)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------C
T ss_pred eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccc-cccccCc
Confidence 456788888899999999996557899999999999999999999998 344443211100000000 0000011
Q ss_pred eeEE---Ee---cCCCCCCCEEEEEcCcccchHHHHHHHHHHHH--------cCC---------eEEEEEEEeeChhh
Q 029741 113 DRLE---MH---VGAIEPGERALVIDDLVATGGTLSAAVRLLER--------MGA---------EVVECACVVGLPEG 167 (188)
Q Consensus 113 ~~~~---l~---~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~--------~Ga---------~~v~v~~l~~~~~~ 167 (188)
..+. +. .....+||+||||||+++||+||.++++.|++ .|+ +.+.++++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~~ 162 (221)
T 2xbu_A 85 KVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQKP 162 (221)
T ss_dssp EEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECSC
T ss_pred eeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEecccc
Confidence 1111 11 02346999999999999999999999999997 786 58999999999753
No 41
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.66 E-value=4.9e-16 Score=129.45 Aligned_cols=122 Identities=22% Similarity=0.253 Sum_probs=91.5
Q ss_pred HHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEE
Q 029741 50 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERAL 129 (188)
Q Consensus 50 l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VL 129 (188)
+++.+.+.+.+.+.++|++++.||+.+|..+|+.|++|+.+++|.++.++.. ....+. +. .+||+|+
T Consensus 151 l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l~-g~-v~gk~vi 217 (326)
T 3s5j_B 151 VLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVLV-GD-VKDRVAI 217 (326)
T ss_dssp HHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEEE-SC-CTTSEEE
T ss_pred HHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEecc-cc-CCCCEEE
Confidence 4444444443334579999999999999999999999999988876432221 011221 33 5999999
Q ss_pred EEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741 130 VIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 130 IVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~ 184 (188)
||||+++||+|+.++++.|+++|++++.++++|.... +.++|++.+++.++..+.
T Consensus 218 IVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~t~t 274 (326)
T 3s5j_B 218 LVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNT 274 (326)
T ss_dssp EEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSEEEEETT
T ss_pred EEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCEEEEecC
Confidence 9999999999999999999999999999999988643 677787667777776654
No 42
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.64 E-value=5.2e-15 Score=113.95 Aligned_cols=140 Identities=19% Similarity=0.164 Sum_probs=94.4
Q ss_pred chhhhcCHHHHHHHHHHHHHHHhcC---CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeeecc
Q 029741 37 ITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYG 111 (188)
Q Consensus 37 ~~~ll~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~~ 111 (188)
...++.+.+.++.....||+++.+. +..+++|+..||+.+|..|+..++.|... +.-....... ...+
T Consensus 9 ~~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~~-------~~~g 81 (181)
T 3acd_A 9 NGPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAF-------KSSG 81 (181)
T ss_dssp SSSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-----------------
T ss_pred CccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCCc-------CCCC
Confidence 3456678877777777777666432 45689999999999999999999988633 2221110000 0011
Q ss_pred ceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChhhhhccCCCCeEEEEeccc
Q 029741 112 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 112 ~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~~~~~~~l~~~~~ 184 (188)
...+........+||+|||||||++||.|+.++.+.|.+.|++.+.++++++++.. .++.=.+=+.-.++++
T Consensus 82 ~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~~-r~~pi~~DyvG~~ipd 153 (181)
T 3acd_A 82 EVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSR-RQVEVPIHYLGFEIED 153 (181)
T ss_dssp --CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGG-CSSCCCCSEEEEECCS
T ss_pred ceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCcc-ccCCCCCCEEEEECCC
Confidence 11222222334699999999999999999999999999999999999999998753 3333112244556655
No 43
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.63 E-value=1.2e-15 Score=126.76 Aligned_cols=110 Identities=21% Similarity=0.274 Sum_probs=81.5
Q ss_pred CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741 62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 141 (188)
Q Consensus 62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl 141 (188)
+.++|++++.||+.+|..+|+.|++|+.+++|+++.++.. ....+. +. .+||+|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~-g~-v~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII-GE-VEGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc-cc-CCCCEEEEEecccCchHHH
Confidence 5579999999999999999999999998887766432211 011221 33 5899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEeeCh--hhhhccCCCCeEEEEeccc
Q 029741 142 SAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 142 ~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~~~~~~~l~~~~~ 184 (188)
.++++.|+++|++++.++++|... .+.++|++..++.++..+.
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~t~t 277 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDELVVTDT 277 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEEEEESS
T ss_pred HHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEEEEecc
Confidence 999999999999999999999863 3778887777888877665
No 44
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.62 E-value=9.4e-16 Score=130.38 Aligned_cols=134 Identities=14% Similarity=0.158 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCC----------cccchheeeeccc------
Q 029741 49 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG----------EVISEAYVLEYGT------ 112 (188)
Q Consensus 49 ~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~----------~~~~~~~~~~~~~------ 112 (188)
.+++.+.+.+.+.+.++|++++.||+++|..+|+.|++|+.+++|++.... ......+..+++.
T Consensus 178 ~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~ 257 (379)
T 2ji4_A 178 FLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLI 257 (379)
T ss_dssp HHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC------------------------------------
T ss_pred HHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhh
Confidence 344444444433346799999999999999999999999988866542110 0000000000000
Q ss_pred ----eeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh--hhhhccCCCCeEEEEeccc
Q 029741 113 ----DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 113 ----~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~--~~~~~l~~~~~~~l~~~~~ 184 (188)
..+.+. + ..+||+|+||||+++||+|+.++++.|++.|++.+.++++|... ++.++|+...++.++..+.
T Consensus 258 ~~~~~~~~l~-g-~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id~vvvTnt 333 (379)
T 2ji4_A 258 PKEKPPITVV-G-DVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNT 333 (379)
T ss_dssp -----CCCEE-S-CCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCCEEEEESS
T ss_pred hhcccccccc-c-CCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCCEEEEecC
Confidence 000111 2 36999999999999999999999999999999999999998853 3677776556777766654
No 45
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.62 E-value=3.1e-15 Score=124.49 Aligned_cols=110 Identities=22% Similarity=0.302 Sum_probs=84.6
Q ss_pred CCcEEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHH
Q 029741 62 GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 141 (188)
Q Consensus 62 ~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl 141 (188)
+..+|++++.||+.+|..+|..|++|+..++|.+..... ...+.+. + ..+||+|+||||++|||+|+
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~~-----------~~~~~l~-~-~v~gk~VlLVDDiitTG~Tl 233 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNV-----------AEVMNIV-G-NIEGKTAILIDDIIDTAGTI 233 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE-S-CCTTCEEEEECSEESSCHHH
T ss_pred CCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEeccccc-----------eeEEEec-c-cCCCCEEEEEecccCCCHHH
Confidence 456899999999999999999999999887765431110 1112222 3 35999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEeeChh--hhhccCCCCeEEEEeccc
Q 029741 142 SAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL 184 (188)
Q Consensus 142 ~~~~~~L~~~Ga~~v~v~~l~~~~~--~~~~l~~~~~~~l~~~~~ 184 (188)
.++++.|+++|+++|.++++|.... +.++++...+..++..+.
T Consensus 234 ~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~t~t 278 (317)
T 1dku_A 234 TLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNS 278 (317)
T ss_dssp HHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEEETT
T ss_pred HHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCEEEEeCC
Confidence 9999999999999999999666543 666777667887777665
No 46
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.61 E-value=2.8e-15 Score=117.23 Aligned_cols=123 Identities=16% Similarity=0.174 Sum_probs=85.4
Q ss_pred hhhhcCHHHHHHHHHHHHHHHhc-----------CCCcEEEEeCCCChhhHHHHHHHh----CCCeE--EEeecCCCCCc
Q 029741 38 TTLLLDHKAFKDTVDIFVDRYRD-----------MGISVVAGIEARGFVFGPSIALAI----GAKFV--PLRKPNKLPGE 100 (188)
Q Consensus 38 ~~ll~~~~~~~~l~~~la~~~~~-----------~~~d~Iv~v~~gG~~~a~~lA~~l----~~p~~--~~~k~~~~~~~ 100 (188)
..++.+++.++...+.|++.+.+ .+.++|+|++.||+++|..+|..| ++|+. ++.........
T Consensus 13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~ 92 (201)
T 1w30_A 13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL 92 (201)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence 34677888888777777776643 246799999999999999999999 46642 22221110000
Q ss_pred ccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEEEEEEEeeCh
Q 029741 101 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 165 (188)
Q Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v~v~~l~~~~ 165 (188)
..........+.+. ....+|++||||||+++||+|+.++++.|+++| ++++.++++++++
T Consensus 93 ----~~~~~~~~~~~~~~-~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 93 ----MIKPPRPLASTSIP-AGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp ----------CCCCCBCC-TTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ----cccccceeecccCC-CccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 00000000011111 122589999999999999999999999999999 9999999999986
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.58 E-value=4.8e-15 Score=130.40 Aligned_cols=116 Identities=19% Similarity=0.207 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeeec-c-ceeEEEecCCCC
Q 029741 47 FKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEY-G-TDRLEMHVGAIE 123 (188)
Q Consensus 47 ~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~~ 123 (188)
.+.+++.+.+.+.+.++|+|+++|.+|+.+|..+|..+++|+.. +.|++.....++..+...+. + ...+... ....
T Consensus 279 g~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~-~~~v 357 (504)
T 1ecf_A 279 GTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNAN-RAEF 357 (504)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEEC-GGGT
T ss_pred HHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhccc-cccC
Confidence 33444444433333457999999999999999999999999862 33333322221111111110 1 1123321 2236
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 163 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~ 163 (188)
+||+||||||+++||+|+.++++.|+++||++|.+++++.
T Consensus 358 ~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~ 397 (504)
T 1ecf_A 358 RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP 397 (504)
T ss_dssp TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSC
T ss_pred CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEec
Confidence 9999999999999999999999999999999999998864
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.50 E-value=3e-14 Score=123.97 Aligned_cols=115 Identities=22% Similarity=0.259 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE-EeecCCCCCcccchheeee-cc-ceeEEEecCCC
Q 029741 46 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLE-YG-TDRLEMHVGAI 122 (188)
Q Consensus 46 ~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~-~~k~~~~~~~~~~~~~~~~-~~-~~~~~l~~~~~ 122 (188)
....+++.|++.+. .+.|+|+++|.+|..+|..+|..+++|+.. +.|++.....+...+...+ .+ ...+.... ..
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~-~~ 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVR-GV 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECH-HH
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhccccc-cc
Confidence 55677888887764 367899999999999999999999999863 4444432111111100000 01 11233211 23
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEe
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 162 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~ 162 (188)
.+||+||||||++|||+|+.++++.|+++||++|.+++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 5899999999999999999999999999999999999854
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.38 E-value=2.5e-13 Score=108.18 Aligned_cols=114 Identities=9% Similarity=0.133 Sum_probs=82.5
Q ss_pred chhhhcCHHHHHHHHHHHHHHHhc---C--CCcEEEEeCCCChhhHHHHHHHhCCCeEE--EeecCCCCCcccchheeee
Q 029741 37 ITTLLLDHKAFKDTVDIFVDRYRD---M--GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLE 109 (188)
Q Consensus 37 ~~~ll~~~~~~~~l~~~la~~~~~---~--~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~--~~k~~~~~~~~~~~~~~~~ 109 (188)
...++.+++.+...+..|++++.+ . +.++|+|++.||+.+|..+|+.|++|+.. ++... |...
T Consensus 31 ~~~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~----------y~~~ 100 (230)
T 1dqn_A 31 KFHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS----------YKGT 100 (230)
T ss_dssp GCEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE----------EECS
T ss_pred cccEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEE----------eCCC
Confidence 344567887777777777776642 1 46799999999999999999999999743 32211 1000
Q ss_pred ccceeEEE-ec--CCCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeChh
Q 029741 110 YGTDRLEM-HV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 166 (188)
Q Consensus 110 ~~~~~~~l-~~--~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~~ 166 (188)
.... +.+ .. ....+||+||||||+++||.||.++++.|++ +.++++++++.
T Consensus 101 ~s~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 101 RQES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp SCEE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred ccCc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 0111 222 11 1125899999999999999999999999988 78889999986
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.34 E-value=1.8e-11 Score=96.13 Aligned_cols=146 Identities=18% Similarity=0.149 Sum_probs=95.9
Q ss_pred CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhc------------------CCCcEEEEe
Q 029741 8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRD------------------MGISVVAGI 69 (188)
Q Consensus 8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~------------------~~~d~Iv~v 69 (188)
+-.||+++++-..+|+.-. ++..| .. .-.++.+.++.+....+.- .+..+++++
T Consensus 6 ~~~~p~~~~~lt~lRd~~t---~~~~F---r~--~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~~~~~~~~~~~~~vV~I 77 (209)
T 1i5e_A 6 VFDHPLIQHKLTYIRDKNT---GTKEF---RE--LVDEVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGVIPI 77 (209)
T ss_dssp ECCCHHHHHHHHHHHCTTC---CHHHH---HH--HHHHHHHHHHHHHGGGCCEEEEEEECSSCEEEEEEECCCCEEEEEB
T ss_pred EcCCHHHHHHHHHHHCCCC---CHHHH---HH--HHHHHHHHHHHHHHhcCCCcceEEecCCceeeeeEecCCceEEEEE
Confidence 3578999999999988754 11111 11 1122333333333322210 124588999
Q ss_pred CCCChhhHHHHHHHh-CCCeEEEeecCCCCCcccchheeeeccce-eEEEecCCCCCCCEEEEEcCcccchHHHHHHHHH
Q 029741 70 EARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 147 (188)
Q Consensus 70 ~~gG~~~a~~lA~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~~~~~ 147 (188)
.++|+.++..+.+.+ ..+...+.+.+... ..+. ......+...+|++|+||||+++||+|+.++++.
T Consensus 78 lr~G~~~~~~L~~~l~~~~~~~i~~~r~~~-----------t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T~~~a~~~ 146 (209)
T 1i5e_A 78 LRAGIGMVDGILKLIPAAKVGHIGLYRDPQ-----------TLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAAIDA 146 (209)
T ss_dssp TTGGGGGHHHHHHHCTTSEECEEEEECCTT-----------CSSCEEEEEECCTTTTTSEEEEECSEESSSHHHHHHHHH
T ss_pred ecCChHHHHHHHHhCCCCeEEEEEEEEcCC-----------CCceEEEEEcCCCccCCCEEEEEcCCCcCHHHHHHHHHH
Confidence 999999999999988 44444433322110 0111 1122223346899999999999999999999999
Q ss_pred HHHcCCeEEEEEEEeeChhhhhccC
Q 029741 148 LERMGAEVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 148 L~~~Ga~~v~v~~l~~~~~~~~~l~ 172 (188)
|++.|++.+.+++++..+++.+++.
T Consensus 147 L~~~G~~~I~~~~lv~~~~g~~~l~ 171 (209)
T 1i5e_A 147 LKKRGAKSIKFMCLIAAPEGVKAVE 171 (209)
T ss_dssp HHHTTCCCEEEECSEECHHHHHHHH
T ss_pred HHHcCCCEEEEEEEEECHHHHHHHH
Confidence 9999999999999999988777775
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.30 E-value=2.6e-11 Score=95.87 Aligned_cols=142 Identities=15% Similarity=0.174 Sum_probs=96.3
Q ss_pred CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741 8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV 65 (188)
Q Consensus 8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~ 65 (188)
+..||+++++-..+|+.-. ++..| ....+.++..|+....+. +.-+
T Consensus 18 ~~~~p~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g~~~g~~~~g~~lv 85 (221)
T 1o5o_A 18 VVDHPLIKHKLTIMRDKNT---GPKEF---------RELLREITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIV 85 (221)
T ss_dssp ECCCHHHHHHHHHHHSTTC---CHHHH---------HHHHHHHHHHHHHHHTTTCCCEEEEEECSSCEEEEEECCSTTEE
T ss_pred ecCCHHHHHHHHHHHCCCC---CHHHH---------HHHHHHHHHHHHHHHHhcCCceEEEEECCCceEEEEEecCCeEE
Confidence 3578999988888887654 11111 122334444444322111 2237
Q ss_pred EEEeCCCChhhHHHHHHHh-CCCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741 66 VAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA 143 (188)
Q Consensus 66 Iv~v~~gG~~~a~~lA~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~ 143 (188)
+|++.++|+.++..+++.+ +.++.++...+... .++... ....+...+|++|+||||++.||+|+.+
T Consensus 86 iV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~~ 154 (221)
T 1o5o_A 86 VVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIK 154 (221)
T ss_dssp EEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHHHHH
T ss_pred EEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHHHHH
Confidence 8999999999999999998 55554443322110 011111 2222334699999999999999999999
Q ss_pred HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741 144 AVRLLERMGAEVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~ 172 (188)
+++.|++.|++.+.+++++..+++.+++.
T Consensus 155 ai~~L~~~G~~~I~~~~lv~~~~g~~~l~ 183 (221)
T 1o5o_A 155 AIEILKENGAKKITLVALIAAPEGVEAVE 183 (221)
T ss_dssp HHHHHHHTTCCEEEEECSEECHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence 99999999999999999999998877775
No 52
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.20 E-value=3.7e-10 Score=88.46 Aligned_cols=142 Identities=17% Similarity=0.149 Sum_probs=94.0
Q ss_pred CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741 8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV 65 (188)
Q Consensus 8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~ 65 (188)
+-.||+++++-..+|+.-. ++..| ....+.++..|+....+. +.-+
T Consensus 5 v~~hp~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~~~g~~~~g~~l~ 72 (208)
T 2ehj_A 5 EVKHPLVKHKLGLMREQDI---STKRF---------RELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKIT 72 (208)
T ss_dssp ECCCHHHHHHHHHHHCSSC---CHHHH---------HHHHHHHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEECSSCCE
T ss_pred EcCCHHHHHHHHHHHCCCC---ChHHH---------HHHHHHHHHHHHHHHHhcCCceEEEEECCCccEEEEEecCCceE
Confidence 3578999999999988754 11111 122334444444322110 2338
Q ss_pred EEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741 66 VAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA 143 (188)
Q Consensus 66 Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~ 143 (188)
+|++.++|+.++..+.+.+. .++.++.-.+.. +.++... ....+...+|++|+||||++.||+|+.+
T Consensus 73 ~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~-----------~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~~~ 141 (208)
T 2ehj_A 73 VVPILRAGLGMMDGVLENVPSARISVVGMYRNE-----------ETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIA 141 (208)
T ss_dssp EEEBTTGGGGGHHHHHHHCTTCEECEEEEEECT-----------TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHHHH
T ss_pred EEEeecCHHHHHHHHHHhCCcCceeEEEEEEcC-----------CCCceEEEecCCCCccCCCEEEEECCccccHHHHHH
Confidence 99999999999999999875 122122111100 0111122 1122334689999999999999999999
Q ss_pred HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741 144 AVRLLERMGAEVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~ 172 (188)
+++.|++.|++.+.+++++..+++.+++.
T Consensus 142 ai~~L~~~G~~~I~~~~lv~~p~g~~~l~ 170 (208)
T 2ehj_A 142 TIDLLKKAGCSSIKVLVLVAAPEGIAALE 170 (208)
T ss_dssp HHHHHHHTTCCEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence 99999999999999999999998777774
No 53
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.19 E-value=4e-10 Score=88.31 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=94.0
Q ss_pred CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741 8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV 65 (188)
Q Consensus 8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~ 65 (188)
+-.||+++++-..+|+.-. ++..| ....+.++..|+....+. +.-+
T Consensus 4 ~~~hp~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~~~~~~~~g~~~~ 71 (208)
T 2e55_A 4 ELSHPLIKHKVNTARIQDT---SAEKL---------RKTLKELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIV 71 (208)
T ss_dssp ECCCHHHHHHHHHHHCTTS---CHHHH---------HHHHHHHHHHHHHHHTTTCCCEEEEEEETTEEEEEEECCGGGEE
T ss_pred ecCCHHHHHHHHHHHCCCC---CHHHH---------HHHHHHHHHHHHHHHHhhCCCceeEEeCCCCceEeeeecCCcEE
Confidence 3578999999999988754 11111 122334444444322111 1237
Q ss_pred EEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741 66 VAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA 143 (188)
Q Consensus 66 Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~ 143 (188)
+|++.++|+.++..+.+.+. .++.++.-.+.. +.++..+ ....+ ..+|++|+||||++.||+|+.+
T Consensus 72 ~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~-----------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~~ 139 (208)
T 2e55_A 72 FVPILRAGLSFLEGALQVVPNAKVGFLGIKRNE-----------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLEV 139 (208)
T ss_dssp EEEEETTTHHHHHHHHHHSTTCEECEEEEEECT-----------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHHH
T ss_pred EEEEecchHHHHHHHHHhCCCCcEEEEEEEEec-----------CCCceEEEecCCC-CCCCCEEEEECCccccHHHHHH
Confidence 89999999999999999875 222222111110 0111122 12224 4699999999999999999999
Q ss_pred HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741 144 AVRLLERMGAEVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~ 172 (188)
+++.|++.|++.+.+++++..+++.+++.
T Consensus 140 ai~~L~~~G~~~I~~~~lv~~~~g~~~l~ 168 (208)
T 2e55_A 140 ALREILKHSPLKVKSVHAIAAPEGLKRIE 168 (208)
T ss_dssp HHHHHHTTCBSEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEEEECHHHHHHHH
Confidence 99999999999999999999998777775
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.15 E-value=3.9e-10 Score=88.38 Aligned_cols=142 Identities=21% Similarity=0.219 Sum_probs=92.7
Q ss_pred CCCChhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcC----------------------CCcE
Q 029741 8 LRGDPRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM----------------------GISV 65 (188)
Q Consensus 8 ~~~~~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~----------------------~~d~ 65 (188)
+-.||+++++-..+|+.-. ++..| ....+.++..|+....+. +.-+
T Consensus 5 v~~~p~i~~~lt~lRd~~t---~~~~F---------r~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g~~~g~~~~g~~l~ 72 (208)
T 1v9s_A 5 LVDHPLVQHKLAHLRDKRT---GPKDF---------RELAEEVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKKLA 72 (208)
T ss_dssp ECCCHHHHHHHHHHHSTTC---CHHHH---------HHHHHHHHHHHHHHHTTTCCEEEEEEECSSSEEEEEEECSSCCE
T ss_pred EcCCHHHHHHHHHHHCCCC---CHHHH---------HHHHHHHHHHHHHHHHccCCCeEEEEECCCceEEEEEecCCceE
Confidence 3578999999999988754 11111 122334444444322110 2338
Q ss_pred EEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741 66 VAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTLSA 143 (188)
Q Consensus 66 Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~ 143 (188)
+|++.++|+.++..+.+.+. .++.++.-.+. . +.++... ....+...+|++|+||||++.||+|+.+
T Consensus 73 ~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd-~----------~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~~ 141 (208)
T 1v9s_A 73 LVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASL 141 (208)
T ss_dssp EEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHHHH
T ss_pred EEEeccchHHHHHHHHHhCCCCeeeEEEEEEc-C----------CCCCceEEeccCCCccCCCEEEEECCccccHHHHHH
Confidence 99999999999999998775 22222221111 0 0011111 1122334589999999999999999999
Q ss_pred HHHHHHHcCCeEEEEEEEeeChhhhhccC
Q 029741 144 AVRLLERMGAEVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 144 ~~~~L~~~Ga~~v~v~~l~~~~~~~~~l~ 172 (188)
+++.|++.|++.+.+++++..+++.+++.
T Consensus 142 ai~~L~~~G~~~I~~~~lv~~~~g~~~l~ 170 (208)
T 1v9s_A 142 ALSLLKERGATGVKLMAILAAPEGLERIA 170 (208)
T ss_dssp HHHHHHHTTCCSCEEEEEEECHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence 99999999999999999999998777775
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.95 E-value=3e-09 Score=85.07 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=71.6
Q ss_pred cEEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeE-EEecCCCCCCCEEEEEcCcccchHHH
Q 029741 64 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL 141 (188)
Q Consensus 64 d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~Gk~VLIVDDvi~TG~Tl 141 (188)
-++|++.++|+.++..+.+.+. .++-++.-.+.. +.++..+ +...+...+|++|+||||++.||+|+
T Consensus 104 l~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~-----------~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~ 172 (243)
T 1bd3_D 104 ICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDE-----------TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSV 172 (243)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECS-----------SSCCEEEEEEECCTTGGGSEEEEECSEESSCHHH
T ss_pred EEEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcC-----------CCCCeEEEeccCCcccCCCEEEEECCccccHHHH
Confidence 3688999999999999999874 233222111100 0011122 12223345899999999999999999
Q ss_pred HHHHHHHHHcCC--eEEEEEEEeeChhhhhccC
Q 029741 142 SAAVRLLERMGA--EVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 142 ~~~~~~L~~~Ga--~~v~v~~l~~~~~~~~~l~ 172 (188)
.++++.|++.|+ +.+.+++++..+++.+++.
T Consensus 173 ~~ai~~L~~~G~~p~~I~~~~lvaap~g~~~l~ 205 (243)
T 1bd3_D 173 CKAIEVLLRLGVKEERIIFVNILAAPQGIERVF 205 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEEEEeCHHHHHHHH
Confidence 999999999999 9999999999998777775
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.81 E-value=9.9e-09 Score=80.82 Aligned_cols=96 Identities=18% Similarity=0.197 Sum_probs=69.9
Q ss_pred EEEEeCCCChhhHHHHHHHhC-CCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchHHHHH
Q 029741 65 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA 143 (188)
Q Consensus 65 ~Iv~v~~gG~~~a~~lA~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~Tl~~ 143 (188)
++|++.++|..++..+.+.+. .++-.+--.+. ... +....+...+ ..+|++|+|+||++.||+|+.+
T Consensus 80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd--~~t---------~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ 147 (217)
T 3dmp_A 80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRA--DDH---------RPVEYLVRLP-DLEDRIFILCDPMVATGYSAAH 147 (217)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTSEECEEECSCC--CSS---------SCCCSEEECC-CCTTCEEEEECSEESSSHHHHH
T ss_pred EEEEecccchHHHHHHHHhCcCCceeEEEEEEC--CCC---------CcEEEeecCC-CCCCCEEEEEcCcccccHHHHH
Confidence 788899999999999999874 34333221111 000 0000111124 4689999999999999999999
Q ss_pred HHHHHHHcCC--eEEEEEEEeeChhhhhccC
Q 029741 144 AVRLLERMGA--EVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 144 ~~~~L~~~Ga--~~v~v~~l~~~~~~~~~l~ 172 (188)
+++.|++.|+ +.+.+++++..+++.+++.
T Consensus 148 ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~ 178 (217)
T 3dmp_A 148 AIDVLKRRGVPGERLMFLALVAAPEGVQVFQ 178 (217)
T ss_dssp HHHHHHTTTCCGGGEEEECSEECHHHHHHHH
T ss_pred HHHHHHHcCCCcCeEEEEEEEeCHHHHHHHH
Confidence 9999999999 8899999999888766664
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.58 E-value=2.1e-07 Score=73.22 Aligned_cols=100 Identities=11% Similarity=0.072 Sum_probs=69.2
Q ss_pred cEEEEeCCCChhhHHHHHHHhC-CCeEEE--eecCCCCCcccchheeeec-cceeE-EEecCCCCCCC--EEEEEcCccc
Q 029741 64 SVVAGIEARGFVFGPSIALAIG-AKFVPL--RKPNKLPGEVISEAYVLEY-GTDRL-EMHVGAIEPGE--RALVIDDLVA 136 (188)
Q Consensus 64 d~Iv~v~~gG~~~a~~lA~~l~-~p~~~~--~k~~~~~~~~~~~~~~~~~-~~~~~-~l~~~~~~~Gk--~VLIVDDvi~ 136 (188)
-++|++.++|..++..+...+. .+.-.+ .+....... . +. .+... +...+ ..+++ +|+|+||++.
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~------~-~~~~~p~~~y~klP-~i~~~~~~VilvDp~la 144 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKE------V-PKDMDVYIYYKKIP-DIRAKVDNVIIADPMIA 144 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSS------C-CSCCCEEEEEEECC-CCCTTTCEEEEECSEES
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccc------c-ccccCceEeeccCC-CccCCcceEEEEcCCcc
Confidence 3788999999999999998874 333222 111110000 0 00 01111 12224 45888 9999999999
Q ss_pred chHHHHHHHHHHHHcCC-eEEEEEEEeeChhhhhccC
Q 029741 137 TGGTLSAAVRLLERMGA-EVVECACVVGLPEGQRRLD 172 (188)
Q Consensus 137 TG~Tl~~~~~~L~~~Ga-~~v~v~~l~~~~~~~~~l~ 172 (188)
||+|+.++++.|++ |+ +.+.+++++..+++.+++.
T Consensus 145 TG~T~~~ai~~L~~-G~p~~I~~~~~vaa~~gl~~l~ 180 (216)
T 1xtt_A 145 TASTMLKVLEEVVK-ANPKRIYIVSIISSEYGVNKIL 180 (216)
T ss_dssp SSHHHHHHHHHHGG-GCCSEEEEECSEEEHHHHHHHH
T ss_pred chHHHHHHHHHHHh-CCCCeEEEEEEecCHHHHHHHH
Confidence 99999999999999 99 9999999999888777764
No 58
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=88.21 E-value=5.8 Score=32.40 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=50.6
Q ss_pred eCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccchH----HHHHH
Q 029741 69 IEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAA 144 (188)
Q Consensus 69 v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG~----Tl~~~ 144 (188)
...+.-.+|..+|..||+|+..+.-.+.. .|+-.+.+ ....+|++|.||-.....-. -+.-+
T Consensus 12 ~g~~~~~La~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~ 77 (319)
T 3dah_A 12 TGNANPALAQEVVKILGIPLGKAMVSRFS------------DGEIQVEI--QENVRGKDVFVLQSTCAPTNDNLMELMIM 77 (319)
T ss_dssp ECSSCHHHHHHHHHHHTSCCCCEEEEECT------------TSCEEEEE--CSCCBTCEEEEECCCCSSHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHhCCceeeeEEEECC------------CCCEEEEE--CCCcCCCeEEEEccCCCCCcHHHHHHHHH
Confidence 34455689999999999987544322211 22222333 33468999999976543311 15566
Q ss_pred HHHHHHcCCeEEEEEEEe
Q 029741 145 VRLLERMGAEVVECACVV 162 (188)
Q Consensus 145 ~~~L~~~Ga~~v~v~~l~ 162 (188)
++.++.++|+.+.++...
T Consensus 78 idA~k~asA~rIt~ViPY 95 (319)
T 3dah_A 78 VDALKRASAGRITAAIPY 95 (319)
T ss_dssp HHHHHHTTBSEEEEEESS
T ss_pred HHHHHHcCCcEEEEEccC
Confidence 778889999987765443
No 59
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=82.99 E-value=17 Score=29.69 Aligned_cols=78 Identities=13% Similarity=0.091 Sum_probs=48.0
Q ss_pred CCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hH---HHHHHHH
Q 029741 71 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---TLSAAVR 146 (188)
Q Consensus 71 ~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~---Tl~~~~~ 146 (188)
.+.-.+|..+|..||+|+..+.-.+-. .|+-.+.+ ....+|+.|.||-..-.. -. -+.-+++
T Consensus 10 ~~~~~La~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~id 75 (326)
T 3s5j_B 10 SSHQDLSQKIADRLGLELGKVVTKKFS------------NQETCVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMIN 75 (326)
T ss_dssp SSCCHHHHHHHHHTTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEeECC------------CCCEEEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHH
Confidence 444579999999999987544322211 22222333 344699999999764332 11 2335567
Q ss_pred HHHHcCCeEEEEEEEe
Q 029741 147 LLERMGAEVVECACVV 162 (188)
Q Consensus 147 ~L~~~Ga~~v~v~~l~ 162 (188)
.++.++|+.+.++...
T Consensus 76 A~k~asA~rIt~ViPY 91 (326)
T 3s5j_B 76 ACKIASASRVTAVIPC 91 (326)
T ss_dssp HHHHTTCSEEEEEESS
T ss_pred HHHhcCCcEEEEeccC
Confidence 7788999988765443
No 60
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=81.57 E-value=18 Score=28.72 Aligned_cols=77 Identities=8% Similarity=0.017 Sum_probs=48.5
Q ss_pred CChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hH--HHHHHHHHH
Q 029741 72 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG--TLSAAVRLL 148 (188)
Q Consensus 72 gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~--Tl~~~~~~L 148 (188)
+.-.+|..+|..||+|+..+...+..+ |+-.+.+ ....+|++|.||-..-.. -. -+.-+++.+
T Consensus 8 ~~~~la~~ia~~l~~~l~~~~~~~F~d------------GE~~v~i--~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~ 73 (284)
T 1u9y_A 8 QSQNLAFKVAKLLNTKLTRVEYKRFPD------------NEIYVRI--VDEINDDEAVIINTQKNQNDAIVETILLCDAL 73 (284)
T ss_dssp TCHHHHHHHHHHTTCCEECEEEEECTT------------CCEEEEE--CSCCCSSEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCeeeeeEEEECCC------------CCEEEEe--CCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 445799999999999986543332212 2222333 334689999999876542 11 244556788
Q ss_pred HHcCCeEEEEEEEe
Q 029741 149 ERMGAEVVECACVV 162 (188)
Q Consensus 149 ~~~Ga~~v~v~~l~ 162 (188)
+.++|+.+.++...
T Consensus 74 ~~~~a~~i~~v~Py 87 (284)
T 1u9y_A 74 RDEGVKKITLVAPY 87 (284)
T ss_dssp HTTTCCEEEEECSS
T ss_pred HHcCCceEEEEecc
Confidence 88999987655433
No 61
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=77.24 E-value=27 Score=28.21 Aligned_cols=84 Identities=13% Similarity=0.045 Sum_probs=51.1
Q ss_pred EEEEeCCCChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccch-H---H
Q 029741 65 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATG-G---T 140 (188)
Q Consensus 65 ~Iv~v~~gG~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG-~---T 140 (188)
..+-...+.-.+|..+|..||+|+..+.-.+-. .|+-.+.+ ....+|+.|.||-..-..- . -
T Consensus 10 ~~i~~~~~~~~la~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~e~vrg~dv~iiqs~~~~~nd~lme 75 (317)
T 1dku_A 10 LKIFSLNSNPELAKEIADIVGVQLGKCSVTRFS------------DGEVQINI--EESIRGCDCYIIQSTSDPVNEHIME 75 (317)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSSHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHhCCeeEeeEEEECC------------CCCEEEEe--cCCCCCCEEEEEcCCCCCCcHHHHH
Confidence 333344555689999999999987654322211 12222332 3346899999987754321 1 2
Q ss_pred HHHHHHHHHHcCCeEEEEEEEe
Q 029741 141 LSAAVRLLERMGAEVVECACVV 162 (188)
Q Consensus 141 l~~~~~~L~~~Ga~~v~v~~l~ 162 (188)
+.-++..++.++++.+.++...
T Consensus 76 ll~~~~a~~~~~a~~i~av~pY 97 (317)
T 1dku_A 76 LLIMVDALKRASAKTINIVIPY 97 (317)
T ss_dssp HHHHHHHHHHTTCSEEEEEESS
T ss_pred HHHHHHHhhccCcceEEEEEEc
Confidence 4445667778889887765544
No 62
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=67.74 E-value=51 Score=27.34 Aligned_cols=78 Identities=12% Similarity=0.056 Sum_probs=47.2
Q ss_pred CCChhhHHH---HHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccc-hH---HHHH
Q 029741 71 ARGFVFGPS---IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---TLSA 143 (188)
Q Consensus 71 ~gG~~~a~~---lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~T-G~---Tl~~ 143 (188)
.+.-.+|.. +|..||+|+..+.-.+.. .|+..+.+ ....+|+.|.||-..... -. -+.-
T Consensus 36 ~~~~~la~~~~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~esvrg~dV~iiqs~~~~~nd~lmeLl~ 101 (379)
T 2ji4_A 36 NSNSSCMELSKKIAERLGVEMGKVQVYQEP------------NRETRVQI--QESVRGKDVFIIQTVSKDVNTTIMELLI 101 (379)
T ss_dssp CCSGGGGHHHHHHHHHHTCCCCCEEEEECT------------TSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHhCCceEeeEEEECC------------CCCEEEEe--CCCcCCCEEEEEeCCCCCccHHHHHHHH
Confidence 334567788 999999987543322211 12222333 334689999999886531 12 2344
Q ss_pred HHHHHHHcCCeEEEEEEEe
Q 029741 144 AVRLLERMGAEVVECACVV 162 (188)
Q Consensus 144 ~~~~L~~~Ga~~v~v~~l~ 162 (188)
+++.|+.++|+.+.++...
T Consensus 102 ~idA~k~asA~rit~ViPY 120 (379)
T 2ji4_A 102 MVYACKTSCAKSIIGVIPY 120 (379)
T ss_dssp HHHHHHHTTCSEEEEECSS
T ss_pred HHHHHHhcCCceEEEEEec
Confidence 5667888899987755433
No 63
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=64.60 E-value=19 Score=28.81 Aligned_cols=74 Identities=8% Similarity=-0.037 Sum_probs=44.2
Q ss_pred ChhhHHHHHHHhCCCeEEEeecCCCCCcccchheeeeccceeEEEecCCCCCCCEEEEEcCcccch-HH---HHHHHHHH
Q 029741 73 GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATG-GT---LSAAVRLL 148 (188)
Q Consensus 73 G~~~a~~lA~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gk~VLIVDDvi~TG-~T---l~~~~~~L 148 (188)
.-.+|..+|..||+|+..+.-.+.. .|+..+.+ .. . |++|.||--.-..- .. +.-+++.+
T Consensus 9 ~~~la~~ia~~lg~~l~~~~~~~F~------------dGE~~v~i--~e-~-g~dV~iiqs~~~p~nd~lmeLl~~ida~ 72 (286)
T 3lrt_A 9 SLKLAARIAEELKTEPVMPDERRFP------------DGELYLRY--DE-D-LTGHNIFIIGNTHSDAEVMEMILTLSAI 72 (286)
T ss_dssp GHHHHHHHHHHTTSCEECCEEEECT------------TSCEEEEC--CS-C-CTTSEEEEECCCCSHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHhCCCeeeeEEEECC------------CCCEEEEE--cC-C-CCcEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 3478999999999998643322211 22222222 22 2 88999887543221 11 44566777
Q ss_pred HHcCCeEEEEEEEe
Q 029741 149 ERMGAEVVECACVV 162 (188)
Q Consensus 149 ~~~Ga~~v~v~~l~ 162 (188)
+.+||+.+.++...
T Consensus 73 k~~~A~~it~ViPY 86 (286)
T 3lrt_A 73 QDYRTKSVNIIAPY 86 (286)
T ss_dssp GGSCCSEEEEEESS
T ss_pred HHcCCCEEEEEecC
Confidence 88999887665443
No 64
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=55.11 E-value=20 Score=22.82 Aligned_cols=35 Identities=17% Similarity=0.109 Sum_probs=31.3
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v 156 (188)
+..|..++=|++.-.+|.|..++.++|++.|-.+.
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~ 75 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVVT 75 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEE
Confidence 56899999999999999999999999998877653
No 65
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=54.83 E-value=73 Score=24.78 Aligned_cols=77 Identities=13% Similarity=0.019 Sum_probs=46.7
Q ss_pred CCChhHHHHhhccccc---CCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHH-h
Q 029741 9 RGDPRLQGISKAIRVV---PDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALA-I 84 (188)
Q Consensus 9 ~~~~~~~~~~~~~r~~---~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~-l 84 (188)
-.||-|..+++-++.. .|+...-.+-++..+--.|+.....+++.| .+.++|+|+++.. +-+..++.. -
T Consensus 17 ~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l----~~~~~DlIiai~t---~aa~a~~~~~~ 89 (302)
T 3lkv_A 17 VEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQF----VGENPDVLVGIAT---PTAQALVSATK 89 (302)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHH----HTTCCSEEEEESH---HHHHHHHHHCS
T ss_pred ecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHH----HhcCCcEEEEcCC---HHHHHHHhhcC
Confidence 3699998887766432 232211134445555567888777666554 4568999998754 334444433 3
Q ss_pred CCCeEEEe
Q 029741 85 GAKFVPLR 92 (188)
Q Consensus 85 ~~p~~~~~ 92 (188)
++|.++.-
T Consensus 90 ~iPVVf~~ 97 (302)
T 3lkv_A 90 TIPIVFTA 97 (302)
T ss_dssp SSCEEEEE
T ss_pred CCCeEEEe
Confidence 68988754
No 66
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=54.26 E-value=9.5 Score=26.41 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=48.2
Q ss_pred hhHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEE
Q 029741 12 PRLQGISKAIRVVPDFPIPGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 90 (188)
Q Consensus 12 ~~~~~~~~~~r~~~~~~~~g~~~~d~~~ll~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~ 90 (188)
-..++|.+.+...|+|-......+|+..+- +...+..+. +.++..+. .++|+..+.-..-...|..+|.|...
T Consensus 29 ~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~-~~~dl~~L~----~~l~~~gl-~~vGV~g~~~~~~~~~a~~~GLp~l~ 101 (120)
T 3ghf_A 29 VIRQALEDKIAQAPAFLKHAPVVINVSGLE-SPVNWPELH----KIVTSTGL-RIIGVSGCKDASLKVEIDRMGLPLLT 101 (120)
T ss_dssp HHHHHHHHHHHHSHHHHTTCEEEEEEEECC-SSCCHHHHH----HHHHTTTC-EEEEEESCCCHHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHHHHhChHhhCCCcEEEEccccC-ChHHHHHHH----HHHHHcCC-EEEEEeCCCcHHHHHHHHHCCCCccC
Confidence 356788888999999887777888988764 222233333 33444454 67888766544345677788998753
No 67
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=49.57 E-value=33 Score=28.21 Aligned_cols=48 Identities=6% Similarity=-0.087 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 44 HKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 44 ~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
......+...+.+.+.+.+||+|+........++...|..+++|++.+
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 344445555666667777999999988666666666677889998765
No 68
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=49.54 E-value=44 Score=26.98 Aligned_cols=37 Identities=19% Similarity=0.046 Sum_probs=24.4
Q ss_pred HHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 55 VDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 55 a~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
.+.+++.++|+|++...--...+...|..+++|++..
T Consensus 85 ~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 3445566899999864333334455577889998754
No 69
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=47.54 E-value=41 Score=21.69 Aligned_cols=28 Identities=29% Similarity=0.303 Sum_probs=17.3
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 125 GERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
+++|+||||=-.... .+...|.+.|..+
T Consensus 2 ~~~ilivdd~~~~~~---~l~~~L~~~g~~v 29 (120)
T 3f6p_A 2 DKKILVVDDEKPIAD---ILEFNLRKEGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHTTCEE
T ss_pred CCeEEEEECCHHHHH---HHHHHHHhCCEEE
Confidence 468999998655433 3445556667653
No 70
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=45.71 E-value=26 Score=22.90 Aligned_cols=32 Identities=31% Similarity=0.285 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
.+++.|+++++ +|..-..++..|++.|.+.+.
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 81 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 81 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEE
Confidence 46778888875 788888999999999987654
No 71
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.57 E-value=19 Score=25.04 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=20.6
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
++-+||||||--+.-. .+...|++.|..++.
T Consensus 11 k~~rILiVDD~~~~r~---~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 11 KNMKILIVDDFSTMRR---IVKNLLRDLGFNNTQ 41 (134)
T ss_dssp TTCCEEEECSCHHHHH---HHHHHHHHTTCCCEE
T ss_pred CCCEEEEEeCCHHHHH---HHHHHHHHcCCcEEE
Confidence 4558999999766644 344556678876443
No 72
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=45.48 E-value=46 Score=21.57 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=17.1
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 126 ERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 126 k~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
++||||||=-... ......|++.|..+
T Consensus 3 ~~ILivdd~~~~~---~~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSAVLR---KIVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred ceEEEEeCCHHHH---HHHHHHHHHCCcEE
Confidence 5899999865443 34445566677654
No 73
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=44.67 E-value=44 Score=22.04 Aligned_cols=43 Identities=14% Similarity=0.090 Sum_probs=35.7
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEee
Q 029741 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 163 (188)
Q Consensus 121 ~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~ 163 (188)
.+..|+.++=|++.-..|.|-.+++++|++.......+..++.
T Consensus 46 ~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 46 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 4568999999999999999999999999997665545555554
No 74
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=43.28 E-value=31 Score=24.01 Aligned_cols=33 Identities=30% Similarity=0.305 Sum_probs=27.1
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
+.+++.|+++++ +|..-..++..|++.|.+.+.
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~ 85 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 85 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCEE
Confidence 346788999876 788888999999999987654
No 75
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=42.94 E-value=59 Score=26.15 Aligned_cols=43 Identities=14% Similarity=0.047 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741 49 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (188)
Q Consensus 49 ~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~ 92 (188)
.....+.+.+.+.++|+|+. ...-...+..+|..+|+|++...
T Consensus 105 ~~~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 105 SVLRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 34455666677778999984 31223446677889999987654
No 76
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=42.60 E-value=58 Score=20.76 Aligned_cols=29 Identities=28% Similarity=0.430 Sum_probs=24.8
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCC
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga 153 (188)
+.+++.|+++. .+|..-..++..|++.|.
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 34678999987 688888999999999998
No 77
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=41.95 E-value=68 Score=25.42 Aligned_cols=42 Identities=17% Similarity=0.022 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741 50 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (188)
Q Consensus 50 l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~ 92 (188)
....+.+.+.+.++|+|+.-. .....+..+|..+|+|.+...
T Consensus 90 ~~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 90 ILRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHHTTCCCSEEEEES-TTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEECc-hHHHHHHHHHHhhCCCEEEEe
Confidence 345566667677999998731 233456778899999987653
No 78
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=41.13 E-value=42 Score=20.70 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=26.4
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
.+++.|+++.+ +|..-..++..|++.|.+.+..
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~~ 71 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVEN 71 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEEe
Confidence 46788888875 6888888999999999876553
No 79
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=39.20 E-value=77 Score=25.63 Aligned_cols=41 Identities=20% Similarity=0.129 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741 50 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (188)
Q Consensus 50 l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~ 92 (188)
....+.+.+++.++|+||+-.. ...+..+|..+|+|.+.+.
T Consensus 97 ~~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 97 VLPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEEe
Confidence 3444555555668999998553 3467888999999987653
No 80
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=38.44 E-value=51 Score=25.81 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCC----CChhhHHHHHHHhCCCeEE
Q 029741 49 DTVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 90 (188)
Q Consensus 49 ~l~~~la~~~~~~~~d~Iv~v~~----gG~~~a~~lA~~l~~p~~~ 90 (188)
..++.|+..+.+.++|+|++-.. .|-.++..+|..|+.|.+.
T Consensus 99 ~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 144 (264)
T 1o97_C 99 VVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (264)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 44455555554447888877543 3467999999999999864
No 81
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=38.21 E-value=59 Score=26.00 Aligned_cols=38 Identities=13% Similarity=-0.075 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 52 DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 52 ~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
..+.+.+.+.++|+|++-. ....+..+|..+++|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 4555556666899998863 3344667788999998764
No 82
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.52 E-value=66 Score=20.75 Aligned_cols=29 Identities=34% Similarity=0.391 Sum_probs=16.8
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
.+.+||||||=-..... +.+.|.+.|..+
T Consensus 5 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~v 33 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAA---IERVLKRDHWQV 33 (132)
T ss_dssp --CEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCccEEEEECCHHHHHH---HHHHHHHCCcEE
Confidence 46789999986555444 344455566643
No 83
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=36.92 E-value=73 Score=25.29 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 51 ~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
...+.+.+++.++|+|++-.. ...+..+|..+|+|++..
T Consensus 96 ~~~l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 96 LPRMLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 344444455568999998543 345677889999998764
No 84
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=36.86 E-value=52 Score=26.98 Aligned_cols=38 Identities=18% Similarity=0.050 Sum_probs=26.9
Q ss_pred HHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 52 DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 52 ~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
..+.+.+++.++|+|++-. +...+..+|..+|+|++..
T Consensus 134 ~~l~~~~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 134 EGMVSFCRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHHHHHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 3344444455899998764 3467788999999998765
No 85
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=36.74 E-value=57 Score=25.45 Aligned_cols=42 Identities=7% Similarity=-0.129 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCC----CChhhHHHHHHHhCCCeEE
Q 029741 49 DTVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 90 (188)
Q Consensus 49 ~l~~~la~~~~~~~~d~Iv~v~~----gG~~~a~~lA~~l~~p~~~ 90 (188)
..++.|+..+.+.++|+|++-.. .|-.++..+|..|+.|.+.
T Consensus 103 ~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 103 QVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCccc
Confidence 34444444444446888777543 3467999999999999853
No 86
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=35.91 E-value=76 Score=25.36 Aligned_cols=39 Identities=15% Similarity=0.115 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 51 ~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
...+.+.+++.++|+|++-. ....+..+|..+++|++..
T Consensus 112 ~~~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 112 RDEALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 33455555566899998643 2244667788899998754
No 87
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=35.55 E-value=1.1e+02 Score=24.69 Aligned_cols=41 Identities=20% Similarity=0.092 Sum_probs=28.9
Q ss_pred HHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEEe
Q 029741 50 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 92 (188)
Q Consensus 50 l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~~ 92 (188)
....+.+.+.+.++|+|++-.. + ..+..+|..+|+|.+...
T Consensus 92 ~~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 92 ALPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEEe
Confidence 3445556666678999997433 3 467788999999987654
No 88
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=35.50 E-value=62 Score=25.36 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~ 165 (188)
.+|+++|| +.+|++-++++-.|.+.|+..+. ++++.
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i~---i~nRt 158 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASIT---LCDPS 158 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEE---EECSC
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeEE---EeCCC
Confidence 58999996 58999999999999999988765 34554
No 89
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=35.18 E-value=49 Score=21.62 Aligned_cols=29 Identities=34% Similarity=0.492 Sum_probs=24.6
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCC
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga 153 (188)
+.+++.|+++. .+|..-..++..|++.|.
T Consensus 52 l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 52 LERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp SCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 34678899888 688888899999999998
No 90
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=34.71 E-value=39 Score=21.98 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
.+++.|+++.+ +|..-..++..|++.|.+.+.
T Consensus 56 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 87 (108)
T 1gmx_A 56 DFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVY 87 (108)
T ss_dssp CTTSCEEEECS---SSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCCCEEEEcC---CCchHHHHHHHHHHcCCceEE
Confidence 46788888875 677888899999999987554
No 91
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=34.22 E-value=54 Score=25.49 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=27.8
Q ss_pred HHHHHHHHHhcCCCcEEEEeCC----CChhhHHHHHHHhCCCeEE
Q 029741 50 TVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 90 (188)
Q Consensus 50 l~~~la~~~~~~~~d~Iv~v~~----gG~~~a~~lA~~l~~p~~~ 90 (188)
.++.|+..+.+.++|+|++-.. .|-.++..+|..|+.|.+.
T Consensus 101 ~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 145 (252)
T 1efp_B 101 VAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQAT 145 (252)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 4444444444346888877543 3467999999999999853
No 92
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=33.19 E-value=76 Score=25.48 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=27.0
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
..|++++|+ .+|++-+.++..|.+.|++.+.+
T Consensus 146 l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~v 177 (312)
T 3t4e_A 146 MRGKTMVLL----GAGGAATAIGAQAAIEGIKEIKL 177 (312)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEEE
Confidence 579999976 57999999999999999976643
No 93
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=32.87 E-value=53 Score=23.85 Aligned_cols=29 Identities=34% Similarity=0.509 Sum_probs=19.6
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
..+.+||||||=-... ..+.+.|.+.|..
T Consensus 59 ~~~~~ILiVdDd~~~~---~~l~~~L~~~g~~ 87 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISR---KVATGKLKKMGVS 87 (206)
T ss_dssp TTTCEEEEECSCHHHH---HHHHHHHHHTTCS
T ss_pred cCCCEEEEEeCCHHHH---HHHHHHHHHcCCC
Confidence 4788999999976553 3444555666753
No 94
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.55 E-value=64 Score=20.82 Aligned_cols=29 Identities=17% Similarity=0.287 Sum_probs=19.9
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
.+++||||||=-.... ...+.|.+.|..+
T Consensus 6 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~v 34 (130)
T 3eod_A 6 VGKQILIVEDEQVFRS---LLDSWFSSLGATT 34 (130)
T ss_dssp TTCEEEEECSCHHHHH---HHHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHHHH---HHHHHHHhCCceE
Confidence 6789999998665544 4445566777654
No 95
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=31.69 E-value=78 Score=20.19 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=24.2
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCC
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga 153 (188)
+.+++.|+++. .+|..-..++..|++.|.
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~ 81 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHCCC
Confidence 34778899998 578788889999999998
No 96
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=31.34 E-value=1.6e+02 Score=24.93 Aligned_cols=55 Identities=7% Similarity=0.082 Sum_probs=35.5
Q ss_pred chhhhcCHHHHHHHHHHHHHHHhc---------------CCCcEEEEeCCCCh-hhHHHHHHHhCCCeEEE
Q 029741 37 ITTLLLDHKAFKDTVDIFVDRYRD---------------MGISVVAGIEARGF-VFGPSIALAIGAKFVPL 91 (188)
Q Consensus 37 ~~~ll~~~~~~~~l~~~la~~~~~---------------~~~d~Iv~v~~gG~-~~a~~lA~~l~~p~~~~ 91 (188)
+..+.+.....+.+...+...... ...-++.|++..|= .+|..+|..++.+++.+
T Consensus 38 ~~dliG~~~~~~~L~~~l~~~~~~~~~~~~~~g~~~~~~~~~lLL~GppGtGKTtla~~la~~l~~~~i~i 108 (516)
T 1sxj_A 38 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQ 108 (516)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCCHHHHHHHHHHHHHhHhhchhhccccCccCCCCCcEEEEECCCCCCHHHHHHHHHHHcCCCEEEE
Confidence 455667777777766666432210 12235667877775 68899999999887654
No 97
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=31.16 E-value=14 Score=28.59 Aligned_cols=20 Identities=35% Similarity=0.533 Sum_probs=14.7
Q ss_pred EcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 131 IDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 131 VDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
|=|++.||+||+ +.|-+.+.
T Consensus 146 IvDivsTG~TLr-------aNgL~~ie 165 (219)
T 1o63_A 146 IVDITETGRTLK-------ENNLEILD 165 (219)
T ss_dssp EEEEESSSHHHH-------HTTEEEEE
T ss_pred eEEeeccHHHHH-------HCCCEEee
Confidence 448999999974 56766654
No 98
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=31.13 E-value=69 Score=21.00 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcC
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMG 152 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G 152 (188)
+..|..|+=|++.-.++.|...+++.|+..+
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 6789999999999999999999999999987
No 99
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=30.96 E-value=89 Score=21.03 Aligned_cols=28 Identities=18% Similarity=0.318 Sum_probs=17.3
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
++.+||||||=-... ..+.+.|.+.|..
T Consensus 6 ~~~~ILivdd~~~~~---~~l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPTQA---EHLKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHHHH---HHHHHHHHTTTCE
T ss_pred CCCcEEEEeCCHHHH---HHHHHHHHHCCCE
Confidence 456899999865553 3444555566754
No 100
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=30.80 E-value=62 Score=21.36 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=17.3
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
++.+||||||=-... ..+.+.|.+.|..
T Consensus 4 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQA---KTIANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHHH---HHHHHHHHHcCCE
Confidence 457899999966554 4444555566765
No 101
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=30.74 E-value=91 Score=25.40 Aligned_cols=44 Identities=9% Similarity=-0.126 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeCCCChhhH-HHHHHHhCCCeEEE
Q 029741 48 KDTVDIFVDRYRDMGISVVAGIEARGFVFG-PSIALAIGAKFVPL 91 (188)
Q Consensus 48 ~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a-~~lA~~l~~p~~~~ 91 (188)
..+...+.+.+.+.+||+|++.......++ ...|..+++|++.+
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 445555666666679999999876555444 45667789998764
No 102
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=30.56 E-value=97 Score=20.91 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=20.1
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeEE
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v 156 (188)
...+||||||=-.. ...+.+.|++.|..++
T Consensus 35 ~~~~Ilivdd~~~~---~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDSVFT---VKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCCHHH---HHHHHHHHHhCCCeEE
Confidence 44599999996554 4455556667776654
No 103
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=30.28 E-value=14 Score=28.15 Aligned_cols=21 Identities=43% Similarity=0.536 Sum_probs=15.7
Q ss_pred EcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 131 IDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 131 VDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
|=|++.||+|| ++.|-+.+..
T Consensus 151 IvDivsTG~TL-------raNgL~~ie~ 171 (206)
T 1ve4_A 151 VVDVVQTGATL-------RAAGLVEVEV 171 (206)
T ss_dssp EEEEESSSHHH-------HHTTCEEEEE
T ss_pred EEEeccCHHHH-------HHCCCEEeEE
Confidence 34899999997 4677777653
No 104
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=30.01 E-value=69 Score=21.22 Aligned_cols=28 Identities=18% Similarity=0.264 Sum_probs=23.3
Q ss_pred CC-CEEEEEcCcccchHHHHHHHHHHHHcCC
Q 029741 124 PG-ERALVIDDLVATGGTLSAAVRLLERMGA 153 (188)
Q Consensus 124 ~G-k~VLIVDDvi~TG~Tl~~~~~~L~~~Ga 153 (188)
++ +.|+++.+ .+|..-..++..|++.|.
T Consensus 87 ~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~ 115 (134)
T 3g5j_A 87 LNYDNIVIYCA--RGGMRSGSIVNLLSSLGV 115 (134)
T ss_dssp TTCSEEEEECS--SSSHHHHHHHHHHHHTTC
T ss_pred cCCCeEEEEEC--CCChHHHHHHHHHHHcCC
Confidence 45 88998876 578778889999999998
No 105
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=29.52 E-value=1e+02 Score=19.14 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.0
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
+..|..|+=|++.-.+|.|...+.+.+++.+..
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 72 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGK 72 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 568999999999999999999999999998764
No 106
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=29.08 E-value=99 Score=19.25 Aligned_cols=32 Identities=9% Similarity=0.213 Sum_probs=29.4
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCC
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 153 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga 153 (188)
+..|..++=|++.-.+|.|...+.+.+++.+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 66899999999999999999999999998874
No 107
>1im4_A DBH; DNA polymerase PALM, thumb, fingers, helix-hairpin-helix, fidelity, processivity, transferase; 2.30A {Sulfolobus solfataricus} SCOP: e.8.1.7
Probab=28.60 E-value=1.2e+02 Score=22.76 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=45.6
Q ss_pred HHHHhhcc-cccCCCCC--CCceEEechhhhc-CHHHHHHHHHHHHHHHhc-CCCcEEEEeCCCChhhHHHHHHHhCCC
Q 029741 14 LQGISKAI-RVVPDFPI--PGIMFQDITTLLL-DHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK 87 (188)
Q Consensus 14 ~~~~~~~~-r~~~~~~~--~g~~~~d~~~ll~-~~~~~~~l~~~la~~~~~-~~~d~Iv~v~~gG~~~a~~lA~~l~~p 87 (188)
++++.+-. +..|.++. ....|+|+..... .......+++.+.+++.+ .+..+=+|+... .+.+.+|..+++|
T Consensus 90 s~~i~~~l~~~tp~ve~~siDE~~lDvt~~~~~l~~~~~~la~~ir~~i~~~~Gl~~svGia~n--k~lAKlas~~~Kp 166 (221)
T 1im4_A 90 SNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPN--KILAKIIADKSKP 166 (221)
T ss_dssp HHHHHHHHHTTCSEEEEEETTEEEEECTTTTTTCHHHHHHHHHHHHHHHHHHHCCCEEEEEESS--HHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhCCceEEecCCeEEEEecchhhhccCCHHHHHHHHHHHHHHHhCCeEEEEeCCC--HHHHHHHHhhcCC
Confidence 33444444 34454442 2368999988766 555667778888877765 477777777664 4555666667776
No 108
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=28.56 E-value=13 Score=28.43 Aligned_cols=21 Identities=52% Similarity=0.662 Sum_probs=15.8
Q ss_pred EcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 131 IDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 131 VDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
|=|++.||+|| ++.|-+.+..
T Consensus 153 IvDivsTG~TL-------r~NgL~~ie~ 173 (208)
T 1z7m_E 153 IVDIVETGNTL-------SANGLEVIEK 173 (208)
T ss_dssp EEEEESSSHHH-------HTTTCEEEEE
T ss_pred EEEEeCChHHH-------HHCCCEEeEE
Confidence 44899999997 5677777653
No 109
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.55 E-value=84 Score=20.89 Aligned_cols=29 Identities=41% Similarity=0.439 Sum_probs=15.1
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
++-+||||||--..... +.+.|.+.|..+
T Consensus 13 ~~~~iLivdd~~~~~~~---l~~~L~~~g~~v 41 (143)
T 3m6m_D 13 RSMRMLVADDHEANRMV---LQRLLEKAGHKV 41 (143)
T ss_dssp --CEEEEECSSHHHHHH---HHHHHHC--CEE
T ss_pred ccceEEEEeCCHHHHHH---HHHHHHHcCCeE
Confidence 55689999986555333 344455566543
No 110
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=28.05 E-value=1e+02 Score=25.30 Aligned_cols=44 Identities=5% Similarity=-0.106 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeCCCChhhH-HHHHHHhCCCeEEE
Q 029741 48 KDTVDIFVDRYRDMGISVVAGIEARGFVFG-PSIALAIGAKFVPL 91 (188)
Q Consensus 48 ~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a-~~lA~~l~~p~~~~ 91 (188)
..+...+.+.+.+.+||+|++.......++ ...|..+++|++.+
T Consensus 100 ~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 100 SRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 345555666666679999999876555553 55677789998664
No 111
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=27.77 E-value=84 Score=20.47 Aligned_cols=29 Identities=24% Similarity=0.323 Sum_probs=19.9
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
..+.+||||||--.....+. +.|.+.|..
T Consensus 16 ~~~~~ilivdd~~~~~~~l~---~~L~~~g~~ 44 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIE---KGLNVKGFM 44 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCCeEEEEeCCHHHHHHHH---HHHHHcCcE
Confidence 47889999999776655444 444556764
No 112
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=27.64 E-value=71 Score=26.17 Aligned_cols=45 Identities=18% Similarity=0.083 Sum_probs=32.0
Q ss_pred hcCHHHHHHHHHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCe
Q 029741 41 LLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKF 88 (188)
Q Consensus 41 l~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~ 88 (188)
..|++.+...+..++ .+..+|.|++....++..+..++..||+|.
T Consensus 57 ~~d~~~~~~~~~~~~---~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 FEDEEAAMDVVRQTF---VEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp TTCHHHHHHHHHHHH---HHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCHHHHHHHHHHhh---hhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 346655544444443 344789999988888889999999999874
No 113
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=27.40 E-value=87 Score=20.35 Aligned_cols=28 Identities=29% Similarity=0.410 Sum_probs=18.8
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
.+.+||||||--.....+.. .|...|..
T Consensus 6 ~~~~ILivdd~~~~~~~l~~---~L~~~g~~ 33 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVTKG---LLVHLGCE 33 (136)
T ss_dssp TTCEEEEECSCHHHHHHHHH---HHHHTTCE
T ss_pred CCCeEEEEeCCHHHHHHHHH---HHHHcCCe
Confidence 67899999997666544444 44556664
No 114
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=27.10 E-value=1.3e+02 Score=19.41 Aligned_cols=36 Identities=22% Similarity=0.488 Sum_probs=31.0
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
+..|..|+=|++.-.++.|...+.+.++..+...+.
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~ 98 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVH 98 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 678999999999999999999999999997655443
No 115
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=26.80 E-value=1.4e+02 Score=23.62 Aligned_cols=39 Identities=10% Similarity=-0.043 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 51 ~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
...+.+.+++.++|+|++-. ....+...|..+|+|++..
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~--~~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV--CALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET--TCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEeCc--chhHHHHHHHHhCCCEEEE
Confidence 44455556666899988853 2234556788899998765
No 116
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.73 E-value=95 Score=19.81 Aligned_cols=25 Identities=36% Similarity=0.538 Sum_probs=14.5
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCC
Q 029741 126 ERALVIDDLVATGGTLSAAVRLLERMGA 153 (188)
Q Consensus 126 k~VLIVDDvi~TG~Tl~~~~~~L~~~Ga 153 (188)
.+||||||=-..... +.+.|.+.|.
T Consensus 4 ~~ilivdd~~~~~~~---l~~~L~~~g~ 28 (127)
T 3i42_A 4 QQALIVEDYQAAAET---FKELLEMLGF 28 (127)
T ss_dssp EEEEEECSCHHHHHH---HHHHHHHTTE
T ss_pred ceEEEEcCCHHHHHH---HHHHHHHcCC
Confidence 478888886554333 3444555554
No 117
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=26.57 E-value=83 Score=21.31 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=32.3
Q ss_pred CCCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 121 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 121 ~~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
.+..|..|+=|++.-.++.|...+.+.|+..+...+..
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 112 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTI 112 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEE
Confidence 45689999999999999999999999999987665443
No 118
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=26.11 E-value=96 Score=19.07 Aligned_cols=27 Identities=11% Similarity=0.239 Sum_probs=14.8
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 125 GERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
+++|+||||=-..... +.+.|.+.|..
T Consensus 1 ~~~iliv~~~~~~~~~---l~~~l~~~g~~ 27 (119)
T 2j48_A 1 AGHILLLEEEDEAATV---VCEMLTAAGFK 27 (119)
T ss_dssp CCEEEEECCCHHHHHH---HHHHHHHTTCE
T ss_pred CCEEEEEeCCHHHHHH---HHHHHHhCCcE
Confidence 3577888776544333 33444455654
No 119
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=26.05 E-value=99 Score=19.42 Aligned_cols=28 Identities=32% Similarity=0.546 Sum_probs=16.8
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 125 GERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
+.+|+||||=-.....+. +.|...|..+
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~l~~~g~~v 29 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMMLK---DIITKAGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCEE
T ss_pred CceEEEEcCcHHHHHHHH---HHHhhcCcEE
Confidence 357889988655544443 3444566654
No 120
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=25.94 E-value=78 Score=24.11 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v 156 (188)
.+|++|||| ..|..-...++.|.++|++++
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 589999986 679999999999999999764
No 121
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=25.88 E-value=1.2e+02 Score=19.59 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 156 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v 156 (188)
+.+++.|+++- .+|..-..++..|++.|.+++
T Consensus 53 l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEE
T ss_pred hcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEE
Confidence 45778888875 578888889999999999754
No 122
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=25.71 E-value=96 Score=24.47 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=26.6
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
..|++++|+ .+|++-+.++..|.+.|++.+.+
T Consensus 120 ~~~k~vlvl----GaGGaaraia~~L~~~G~~~v~v 151 (282)
T 3fbt_A 120 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIYV 151 (282)
T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEE
T ss_pred ccCCEEEEE----CCcHHHHHHHHHHHHcCCCEEEE
Confidence 579999976 67899999999999999976543
No 123
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=25.66 E-value=78 Score=25.34 Aligned_cols=39 Identities=23% Similarity=0.072 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 51 ~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
...+.+.+++.++|+|++- .....+..+|..+++|++..
T Consensus 119 ~~~l~~~l~~~~pDlVv~d--~~~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 119 VDGTMALVDDYRPDLVVYE--QGATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HHHHHHHHHHHCCSEEEEE--TTCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC--chhhHHHHHHHHcCCCEEEE
Confidence 3445555566689998873 22234677888999998754
No 124
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=25.34 E-value=71 Score=24.12 Aligned_cols=41 Identities=15% Similarity=0.248 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEeC-CCChhhHHHHHHHhCCCeE
Q 029741 49 DTVDIFVDRYRDMGISVVAGIE-ARGFVFGPSIALAIGAKFV 89 (188)
Q Consensus 49 ~l~~~la~~~~~~~~d~Iv~v~-~gG~~~a~~lA~~l~~p~~ 89 (188)
..++.|++.+.+.++++|+... ..|-.++..+|..|+.|++
T Consensus 78 ~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~ 119 (217)
T 3ih5_A 78 PHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLT 119 (217)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCB
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCcc
Confidence 3444444444445788777654 4566899999999998874
No 125
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=25.33 E-value=96 Score=24.42 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
.+|++|||| ..|..-...++.|.++|++++.+
T Consensus 11 l~~k~VLVV----GgG~va~rka~~Ll~~Ga~VtVi 42 (274)
T 1kyq_A 11 LKDKRILLI----GGGEVGLTRLYKLMPTGCKLTLV 42 (274)
T ss_dssp CTTCEEEEE----EESHHHHHHHHHHGGGTCEEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHhCCCEEEEE
Confidence 589999976 89999999999999999986433
No 126
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=24.54 E-value=1.2e+02 Score=23.58 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=28.0
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~ 165 (188)
.+|++++|+ .+|++-+.++..|.+.|+..+. ++++.
T Consensus 118 l~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~---i~~R~ 153 (272)
T 3pwz_A 118 LRNRRVLLL----GAGGAVRGALLPFLQAGPSELV---IANRD 153 (272)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTCCSEEE---EECSC
T ss_pred ccCCEEEEE----CccHHHHHHHHHHHHcCCCEEE---EEeCC
Confidence 479999976 5789999999999999986554 34554
No 127
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=24.02 E-value=1.3e+02 Score=24.02 Aligned_cols=32 Identities=16% Similarity=0.208 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
.+|++++|+ .+|++-+.++..|.+.|++.|.+
T Consensus 152 l~gk~~lVl----GaGG~g~aia~~L~~~Ga~~V~i 183 (315)
T 3tnl_A 152 IIGKKMTIC----GAGGAATAICIQAALDGVKEISI 183 (315)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred ccCCEEEEE----CCChHHHHHHHHHHHCCCCEEEE
Confidence 589999986 46899999999999999976643
No 128
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=23.86 E-value=1.1e+02 Score=19.27 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=15.4
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 126 ERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 126 k~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
++|+||||=-.....+.. .|...|..
T Consensus 2 ~~ilivdd~~~~~~~l~~---~L~~~~~~ 27 (124)
T 1mb3_A 2 KKVLIVEDNELNMKLFHD---LLEAQGYE 27 (124)
T ss_dssp CEEEEECSCHHHHHHHHH---HHHHTTCE
T ss_pred cEEEEEcCCHHHHHHHHH---HHHHcCcE
Confidence 578888887665444443 34455654
No 129
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=23.82 E-value=1.1e+02 Score=19.95 Aligned_cols=28 Identities=29% Similarity=0.306 Sum_probs=17.0
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 125 GERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
..+||||||--.....+ ...|.+.|..+
T Consensus 4 ~~~iLivdd~~~~~~~l---~~~L~~~g~~v 31 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEML---ELVLRGAGYEV 31 (136)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHHCCCEE
Confidence 45889998866554433 44455666543
No 130
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=23.82 E-value=23 Score=28.51 Aligned_cols=21 Identities=38% Similarity=0.472 Sum_probs=14.7
Q ss_pred EcCcccchHHHHHHHHHHHHcCCeEEEE
Q 029741 131 IDDLVATGGTLSAAVRLLERMGAEVVEC 158 (188)
Q Consensus 131 VDDvi~TG~Tl~~~~~~L~~~Ga~~v~v 158 (188)
|=|++.||+||+ +.|-+.+..
T Consensus 158 IvDivsTG~TLr-------aNgL~~ie~ 178 (289)
T 2vd3_A 158 ITDLSSTGTTLR-------MNHLRVIDT 178 (289)
T ss_dssp EEEEESSTHHHH-------HTTEEEEEE
T ss_pred EEEEeCChHHHH-------HCCCEEeEE
Confidence 348999999984 566665543
No 131
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=23.72 E-value=1.2e+02 Score=18.83 Aligned_cols=36 Identities=6% Similarity=0.167 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
+..|..|+=||+.-.++.+...+.+.++..+...+.
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 568999999999999998889999999987765433
No 132
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=23.64 E-value=2.2e+02 Score=22.00 Aligned_cols=41 Identities=17% Similarity=-0.009 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 51 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 51 ~~~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
...+.+.+.+.++|+|++-.......+..++..+++|++..
T Consensus 85 ~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 85 WRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp HHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 34455555556899999864432334566777789998753
No 133
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=23.64 E-value=1.1e+02 Score=19.90 Aligned_cols=28 Identities=11% Similarity=0.190 Sum_probs=17.7
Q ss_pred CCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 125 GERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 125 Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
..+||||||=-..... +.+.|.+.|..+
T Consensus 6 ~~~ilivdd~~~~~~~---l~~~L~~~g~~v 33 (136)
T 3kto_A 6 HPIIYLVDHQKDARAA---LSKLLSPLDVTI 33 (136)
T ss_dssp -CEEEEECSCHHHHHH---HHHHHTTSSSEE
T ss_pred CCeEEEEcCCHHHHHH---HHHHHHHCCcEE
Confidence 4589999996655444 445556667643
No 134
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=23.63 E-value=1.1e+02 Score=19.81 Aligned_cols=30 Identities=13% Similarity=0.203 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
.+++.|+++. .+|..-..++..|++.|.+.
T Consensus 54 ~~~~~ivvyC---~~G~rs~~aa~~L~~~G~~~ 83 (110)
T 2k0z_A 54 HKDKKVLLHC---RAGRRALDAAKSMHELGYTP 83 (110)
T ss_dssp CSSSCEEEEC---SSSHHHHHHHHHHHHTTCCC
T ss_pred CCCCEEEEEe---CCCchHHHHHHHHHHCCCCE
Confidence 4677888887 57888888999999999875
No 135
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=23.58 E-value=1.6e+02 Score=23.20 Aligned_cols=37 Identities=22% Similarity=0.075 Sum_probs=25.2
Q ss_pred HHHHHHhcCCCcEEEEeCCCChhhHHHHHHHhCCCeEEE
Q 029741 53 IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 91 (188)
Q Consensus 53 ~la~~~~~~~~d~Iv~v~~gG~~~a~~lA~~l~~p~~~~ 91 (188)
.+.+.+++.++|+|++-. ....+..+|..+++|.+..
T Consensus 119 ~l~~~~~~~~pD~Vv~d~--~~~~~~~~A~~~gip~~~~ 155 (400)
T 4amg_A 119 GALRTARSWRPDLVVHTP--TQGAGPLTAAALQLPCVEL 155 (400)
T ss_dssp HHHHHHHHHCCSEEEECT--TCTHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHhcCCCEEEECc--chHHHHHHHHHcCCCceee
Confidence 344445555899998643 3456777899999998653
No 136
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=23.31 E-value=1.2e+02 Score=19.71 Aligned_cols=26 Identities=4% Similarity=0.010 Sum_probs=17.7
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcC
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMG 152 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G 152 (188)
...+||||||=-..... +.+.|.+.|
T Consensus 13 ~~~~ilivdd~~~~~~~---l~~~L~~~g 38 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRD---VATRLDALA 38 (135)
T ss_dssp CCEEEEEECSCHHHHHH---HHHHHHHTS
T ss_pred CCcEEEEEcCCHHHHHH---HHHHHhhcC
Confidence 45699999996665444 445566677
No 137
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=23.10 E-value=23 Score=28.64 Aligned_cols=20 Identities=55% Similarity=0.640 Sum_probs=14.6
Q ss_pred EcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 131 IDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 131 VDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
|=|++.||+||+ +.|-+.+.
T Consensus 167 IvDivsTG~TLr-------aNgL~~ie 186 (299)
T 1h3d_A 167 ICDLVSTGATLE-------ANGLREVE 186 (299)
T ss_dssp EEEEESSCHHHH-------HTTEEEEE
T ss_pred EEecccCHHHHH-------HCCCEEeE
Confidence 448999999984 56766654
No 138
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=23.03 E-value=63 Score=22.32 Aligned_cols=32 Identities=9% Similarity=0.116 Sum_probs=22.7
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
.+++.|+++.. +|..-..++..|++.|.+.+.
T Consensus 78 ~~~~~ivvyC~---~G~rS~~aa~~L~~~G~~~v~ 109 (148)
T 2fsx_A 78 QHERPVIFLCR---SGNRSIGAAEVATEAGITPAY 109 (148)
T ss_dssp ---CCEEEECS---SSSTHHHHHHHHHHTTCCSEE
T ss_pred CCCCEEEEEcC---CChhHHHHHHHHHHcCCcceE
Confidence 36778888874 576667889999999987544
No 139
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=22.87 E-value=1e+02 Score=20.72 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
.+++.|+++++ +|..-..++..|++.|.+.+.
T Consensus 84 ~~~~~ivvyC~---~G~rs~~a~~~L~~~G~~~v~ 115 (139)
T 2hhg_A 84 QEDKKFVFYCA---GGLRSALAAKTAQDMGLKPVA 115 (139)
T ss_dssp GSSSEEEEECS---SSHHHHHHHHHHHHHTCCSEE
T ss_pred CCCCeEEEECC---CChHHHHHHHHHHHcCCCCeE
Confidence 46789999985 577777889999999987544
No 140
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=22.72 E-value=1.4e+02 Score=23.37 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEEEEEEeeCh
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 165 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~v~~l~~~~ 165 (188)
.+|++++|+ .+|++-+.++..|.+.|++.+. ++++.
T Consensus 125 l~~k~vlVl----GaGG~g~aia~~L~~~G~~~v~---i~~R~ 160 (283)
T 3jyo_A 125 AKLDSVVQV----GAGGVGNAVAYALVTHGVQKLQ---VADLD 160 (283)
T ss_dssp CCCSEEEEE----CCSHHHHHHHHHHHHTTCSEEE---EECSS
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEE---EEECC
Confidence 589999986 5689999999999999997654 34554
No 141
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=22.56 E-value=81 Score=20.84 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=20.7
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcC-CeEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMG-AEVV 156 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~G-a~~v 156 (188)
.++.+||||||=-..... +.+.|.+.| ..++
T Consensus 18 ~~~~~ilivdd~~~~~~~---l~~~L~~~g~~~v~ 49 (146)
T 4dad_A 18 QGMINILVASEDASRLAH---LARLVGDAGRYRVT 49 (146)
T ss_dssp GGGCEEEEECSCHHHHHH---HHHHHHHHCSCEEE
T ss_pred CCCCeEEEEeCCHHHHHH---HHHHHhhCCCeEEE
Confidence 467899999997665444 445566667 5443
No 142
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=22.38 E-value=1.2e+02 Score=24.83 Aligned_cols=47 Identities=11% Similarity=0.109 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhcCCCcEEEEeCCCCh-hhHHHHHHHhCCCeEEEeecC
Q 029741 49 DTVDIFVDRYRDMGISVVAGIEARGF-VFGPSIALAIGAKFVPLRKPN 95 (188)
Q Consensus 49 ~l~~~la~~~~~~~~d~Iv~v~~gG~-~~a~~lA~~l~~p~~~~~k~~ 95 (188)
..++..++.+++.+.|+|+++-.|.. ..|..+|...++|++.+-...
T Consensus 75 ~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~P~i~IPTTa 122 (364)
T 3iv7_A 75 EVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTALPIVAIPTTY 122 (364)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCCCEEEEECSS
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHhccCCCEEEEcCCc
Confidence 33445555556668899999977664 478889988999998876554
No 143
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=22.22 E-value=25 Score=28.53 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=14.5
Q ss_pred EcCcccchHHHHHHHHHHHHcCCeEE
Q 029741 131 IDDLVATGGTLSAAVRLLERMGAEVV 156 (188)
Q Consensus 131 VDDvi~TG~Tl~~~~~~L~~~Ga~~v 156 (188)
|=|++.||+||+ +.|-+.+
T Consensus 172 IvDiVsTG~TLr-------aNgL~~i 190 (304)
T 1nh8_A 172 IADVVGSGRTLS-------QHDLVAF 190 (304)
T ss_dssp EEEEESSSHHHH-------HTTEEEE
T ss_pred EEEEeCChHHHH-------HCcCEEc
Confidence 448999999974 5676666
No 144
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=22.22 E-value=1.1e+02 Score=19.77 Aligned_cols=29 Identities=21% Similarity=0.286 Sum_probs=18.3
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
...+||||||=-..... +.+.|.+.|..+
T Consensus 6 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~v 34 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREA---LILYLKSRGIDA 34 (136)
T ss_dssp -CCEEEEECSCHHHHHH---HHHHHHHTTCCE
T ss_pred CCCeEEEECCCHHHHHH---HHHHHHHcCceE
Confidence 45689999997665444 445555667654
No 145
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=22.19 E-value=44 Score=25.35 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=22.9
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
...|++|+||||--+. ...+.+.|...|..+..
T Consensus 8 ~l~~~~vlvv~d~~~~---~~~l~~~L~~~g~~v~~ 40 (254)
T 2ayx_A 8 GLSGKRCWLAVRNASL---CQFLETSLQRSGIVVTT 40 (254)
T ss_dssp TTTTEEEEEECCCHHH---HHHHHHHHTTTTEEEEE
T ss_pred ccCCCEEEEEcCCHHH---HHHHHHHHHHCCCEEEE
Confidence 3589999999997655 34445566677876543
No 146
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=22.04 E-value=1.4e+02 Score=19.89 Aligned_cols=44 Identities=18% Similarity=0.179 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCcccc-hHHHHHHHHHHHHcCCeEEE-EEEEeeChh
Q 029741 123 EPGERALVIDDLVAT-GGTLSAAVRLLERMGAEVVE-CACVVGLPE 166 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~T-G~Tl~~~~~~L~~~Ga~~v~-v~~l~~~~~ 166 (188)
.+|+++.++-=--.+ |.++..+.+.|++.|++.++ .+.+-..++
T Consensus 77 l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~~~~~~p~ 122 (138)
T 5nul_A 77 ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEPD 122 (138)
T ss_dssp CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCEEEESSCG
T ss_pred cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCceEEecCCC
Confidence 467777776532223 78899999999999999885 344444443
No 147
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=21.56 E-value=1.6e+02 Score=19.55 Aligned_cols=33 Identities=33% Similarity=0.400 Sum_probs=30.1
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
+..|..|+=|++.-.+|.|...+.+.+++.|..
T Consensus 72 L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 104 (118)
T 3b76_A 72 IKTGDILLNVDGVELTEVSRSEAVALLKRTSSS 104 (118)
T ss_dssp SCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 678999999999999999999999999988654
No 148
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=21.46 E-value=61 Score=21.86 Aligned_cols=32 Identities=22% Similarity=0.169 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
.+++.|+++.+ +|..-..++..|++.|.+.+.
T Consensus 80 ~~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~ 111 (129)
T 1tq1_A 80 GQSDNIIVGCQ---SGGRSIKATTDLLHAGFTGVK 111 (129)
T ss_dssp CTTSSEEEEES---SCSHHHHHHHHHHHHHCCSEE
T ss_pred CCCCeEEEECC---CCcHHHHHHHHHHHcCCCCeE
Confidence 46778888765 677888889999999987554
No 149
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=21.30 E-value=1.5e+02 Score=21.34 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.9
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
+..|..|+=|++.-.+|.|...+++.|+..|..
T Consensus 130 L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~ 162 (170)
T 3egg_C 130 IQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGR 162 (170)
T ss_dssp CCTTCEEEEETTEECTTBCHHHHHHHHHHCCSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 678999999999999999999999999997754
No 150
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=21.29 E-value=76 Score=21.70 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=24.9
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
.+++.|+++.. +|..-..++..|++.|.+.+.
T Consensus 80 ~~~~~ivvyC~---~G~rS~~aa~~L~~~G~~~v~ 111 (137)
T 1qxn_A 80 DPEKPVVVFCK---TAARAALAGKTLREYGFKTIY 111 (137)
T ss_dssp CTTSCEEEECC---SSSCHHHHHHHHHHHTCSCEE
T ss_pred CCCCeEEEEcC---CCcHHHHHHHHHHHcCCcceE
Confidence 46788888874 677777888999999987544
No 151
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.17 E-value=1.7e+02 Score=18.91 Aligned_cols=26 Identities=42% Similarity=0.427 Sum_probs=14.6
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 126 ERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 126 k~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
.+||||||--.. ...+.+.|.+.|..
T Consensus 4 ~~ilivdd~~~~---~~~l~~~l~~~g~~ 29 (143)
T 3jte_A 4 AKILVIDDESTI---LQNIKFLLEIDGNE 29 (143)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CEEEEEcCCHHH---HHHHHHHHHhCCce
Confidence 478888875444 33344445556643
No 152
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=21.10 E-value=1.3e+02 Score=21.68 Aligned_cols=41 Identities=7% Similarity=-0.050 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhcCCCcEEEEeC-CCChhhHHHHHHHhCCCeEE
Q 029741 48 KDTVDIFVDRYRDMGISVVAGIE-ARGFVFGPSIALAIGAKFVP 90 (188)
Q Consensus 48 ~~l~~~la~~~~~~~~d~Iv~v~-~gG~~~a~~lA~~l~~p~~~ 90 (188)
+..++.+++.+. ++|+|+... ..|-.++..+|..|+.|++.
T Consensus 57 e~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~s 98 (166)
T 3fet_A 57 DAVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTAT 98 (166)
T ss_dssp HHHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCcee
Confidence 466666666665 788776654 45668999999999999853
No 153
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=21.05 E-value=1.5e+02 Score=23.23 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCeEEE
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 157 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~v~ 157 (188)
..|++++|+ .+|+.-+.++..|.+.|+..+.
T Consensus 124 l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~ 154 (281)
T 3o8q_A 124 LKGATILLI----GAGGAARGVLKPLLDQQPASIT 154 (281)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHTTCCSEEE
T ss_pred ccCCEEEEE----CchHHHHHHHHHHHhcCCCeEE
Confidence 589999976 5788889999999999986554
No 154
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=20.75 E-value=1.6e+02 Score=18.08 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=29.5
Q ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHcCCeE
Q 029741 122 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 155 (188)
Q Consensus 122 ~~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~~ 155 (188)
+..|..|+=||+.-.++.+...+.+.+++.+...
T Consensus 45 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 78 (91)
T 1g9o_A 45 LLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 78 (91)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 5689999999999999988999999999876553
No 155
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=20.62 E-value=2.5e+02 Score=22.50 Aligned_cols=32 Identities=16% Similarity=0.016 Sum_probs=23.3
Q ss_pred cCCCcEEEEeCCCChhh--HHHHHHHhCCCeEEEe
Q 029741 60 DMGISVVAGIEARGFVF--GPSIALAIGAKFVPLR 92 (188)
Q Consensus 60 ~~~~d~Iv~v~~gG~~~--a~~lA~~l~~p~~~~~ 92 (188)
..++|+|++-.. .... +..+|..+|+|.+...
T Consensus 91 ~~~pD~vi~d~~-~~~~~~~~~~A~~lgiP~v~~~ 124 (415)
T 1iir_A 91 AEGCAAVVTTGL-LAAAIGVRSVAEKLGIPYFYAF 124 (415)
T ss_dssp TTTCSEEEEESC-HHHHHHHHHHHHHHTCCEEEEE
T ss_pred hcCCCEEEECCh-hHhHhhHHHHHHHhCCCEEEEe
Confidence 357998887553 2345 7789999999987654
No 156
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=20.29 E-value=1.1e+02 Score=21.57 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=21.1
Q ss_pred EEEEEcCcccchHHHHHHHHHHHH
Q 029741 127 RALVIDDLVATGGTLSAAVRLLER 150 (188)
Q Consensus 127 ~VLIVDDvi~TG~Tl~~~~~~L~~ 150 (188)
.+.+|||-.-+-.++.++++.|++
T Consensus 36 g~~vi~DyaHnP~si~a~l~al~~ 59 (163)
T 3mvn_A 36 NITVYDDFAHHPTAITATIDALRA 59 (163)
T ss_dssp TEEEEEECCCSHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 478888888899999999999997
No 157
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=20.28 E-value=1.4e+02 Score=19.26 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=18.1
Q ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 124 PGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 124 ~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
...+||||||=-.... .+.+.|.+.|..
T Consensus 5 ~~~~iLivdd~~~~~~---~l~~~l~~~g~~ 32 (140)
T 3grc_A 5 PRPRILICEDDPDIAR---LLNLMLEKGGFD 32 (140)
T ss_dssp CCSEEEEECSCHHHHH---HHHHHHHHTTCE
T ss_pred CCCCEEEEcCCHHHHH---HHHHHHHHCCCe
Confidence 4568999998665544 444555567765
No 158
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.15 E-value=1.5e+02 Score=19.17 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=19.1
Q ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 123 EPGERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 123 ~~Gk~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
.++.+|+||||--.....+. ..|.+.|..
T Consensus 13 ~~~~~ilivdd~~~~~~~l~---~~L~~~g~~ 41 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATLIQ---YHLNQLGAE 41 (138)
T ss_dssp -CCCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCCeEEEECCCHHHHHHHH---HHHHHcCCE
Confidence 47789999999776654444 445556654
No 159
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=20.08 E-value=1.7e+02 Score=18.14 Aligned_cols=26 Identities=19% Similarity=0.334 Sum_probs=15.2
Q ss_pred CEEEEEcCcccchHHHHHHHHHHHHcCCe
Q 029741 126 ERALVIDDLVATGGTLSAAVRLLERMGAE 154 (188)
Q Consensus 126 k~VLIVDDvi~TG~Tl~~~~~~L~~~Ga~ 154 (188)
.+|+||||--.....+. ..|...|..
T Consensus 2 ~~ilivdd~~~~~~~l~---~~l~~~~~~ 27 (120)
T 2a9o_A 2 KKILIVDDEKPISDIIK---FNMTKEGYE 27 (120)
T ss_dssp CEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred ceEEEEcCCHHHHHHHH---HHHHhcCcE
Confidence 36888888655544443 444455654
Done!