Query 029743
Match_columns 188
No_of_seqs 311 out of 1064
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 04:06:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029743hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 3E-33 1E-37 201.3 20.2 150 1-153 170-320 (321)
2 2ynn_A Coatomer subunit beta'; 100.0 1.2E-32 4.2E-37 196.7 21.4 154 1-157 19-175 (304)
3 3ow8_A WD repeat-containing pr 100.0 3.8E-32 1.3E-36 195.6 20.1 155 1-158 128-283 (321)
4 4gqb_B Methylosome protein 50; 100.0 4.8E-32 1.7E-36 196.8 18.9 157 1-159 133-294 (344)
5 1vyh_C Platelet-activating fac 100.0 5.5E-32 1.9E-36 200.7 18.9 154 1-157 114-268 (410)
6 4ery_A WD repeat-containing pr 100.0 4E-31 1.4E-35 189.2 21.3 154 1-157 29-183 (312)
7 2ynn_A Coatomer subunit beta'; 100.0 6.2E-31 2.1E-35 187.9 20.9 156 1-159 103-264 (304)
8 3frx_A Guanine nucleotide-bind 100.0 6.2E-31 2.1E-35 189.1 20.5 153 1-157 71-230 (319)
9 1got_B GT-beta; complex (GTP-b 100.0 5.1E-31 1.7E-35 191.0 19.4 149 1-151 190-340 (340)
10 4h5i_A Guanine nucleotide-exch 100.0 1.1E-30 3.8E-35 191.0 19.5 151 1-155 139-344 (365)
11 2hes_X YDR267CP; beta-propelle 100.0 1.1E-30 3.8E-35 188.6 19.2 153 1-155 64-231 (330)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-30 6.6E-35 188.4 20.4 152 1-154 67-225 (345)
13 1vyh_C Platelet-activating fac 100.0 1.9E-30 6.6E-35 192.4 20.5 155 1-158 198-373 (410)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-30 3.8E-35 189.6 18.9 153 1-155 22-182 (345)
15 4g56_B MGC81050 protein; prote 100.0 1.5E-30 5E-35 189.8 19.1 155 1-158 145-347 (357)
16 4ery_A WD repeat-containing pr 100.0 6.2E-30 2.1E-34 183.0 20.6 155 1-157 71-226 (312)
17 1erj_A Transcriptional repress 100.0 8.4E-30 2.9E-34 187.9 20.7 152 1-156 129-289 (393)
18 1got_B GT-beta; complex (GTP-b 100.0 1.2E-29 4.2E-34 183.8 20.8 154 1-157 61-218 (340)
19 3iz6_a 40S ribosomal protein R 100.0 7.5E-30 2.6E-34 187.5 19.1 152 2-156 212-377 (380)
20 4gqb_B Methylosome protein 50; 100.0 1.1E-29 3.7E-34 184.4 19.6 156 1-159 88-251 (344)
21 2pbi_B Guanine nucleotide-bind 100.0 1.7E-29 5.9E-34 184.0 19.5 148 2-151 203-354 (354)
22 2xzm_R RACK1; ribosome, transl 100.0 4E-29 1.4E-33 181.2 21.0 149 1-154 82-244 (343)
23 1nr0_A Actin interacting prote 100.0 2.2E-29 7.4E-34 195.2 20.5 154 1-157 153-358 (611)
24 2pm7_B Protein transport prote 100.0 3.4E-29 1.2E-33 178.3 19.8 154 1-156 15-191 (297)
25 2pbi_B Guanine nucleotide-bind 100.0 5.3E-29 1.8E-33 181.4 21.2 155 1-157 160-318 (354)
26 2ymu_A WD-40 repeat protein; u 100.0 2.3E-29 8E-34 193.1 19.1 145 1-151 432-577 (577)
27 1nr0_A Actin interacting prote 100.0 5E-29 1.7E-33 193.1 20.5 154 1-157 65-273 (611)
28 2hes_X YDR267CP; beta-propelle 100.0 8.2E-29 2.8E-33 178.8 19.5 150 2-155 21-185 (330)
29 2pm7_B Protein transport prote 100.0 1.6E-28 5.3E-33 174.9 20.2 153 1-155 59-239 (297)
30 3iz6_a 40S ribosomal protein R 100.0 2E-28 6.7E-33 179.9 20.2 156 1-157 163-332 (380)
31 3dwl_C Actin-related protein 2 100.0 1.8E-29 6.1E-34 184.6 14.5 153 1-155 17-178 (377)
32 1erj_A Transcriptional repress 100.0 1.4E-28 4.9E-33 181.4 19.1 153 1-155 212-390 (393)
33 3frx_A Guanine nucleotide-bind 100.0 2.3E-28 7.8E-33 175.7 18.9 152 1-156 23-187 (319)
34 2w18_A PALB2, fancn, partner a 100.0 1.6E-28 5.3E-33 175.3 17.7 148 2-152 185-355 (356)
35 3dm0_A Maltose-binding peripla 100.0 1.1E-28 3.9E-33 193.5 18.7 156 1-159 436-597 (694)
36 3vl1_A 26S proteasome regulato 100.0 1.4E-28 4.8E-33 182.1 18.1 154 2-157 104-281 (420)
37 3vl1_A 26S proteasome regulato 100.0 1.4E-28 4.6E-33 182.2 17.3 155 1-156 145-324 (420)
38 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-28 7.2E-33 180.7 18.1 155 1-157 87-257 (402)
39 3f3f_A Nucleoporin SEH1; struc 100.0 6.7E-28 2.3E-32 173.5 19.7 155 1-157 63-340 (351)
40 4g56_B MGC81050 protein; prote 100.0 3E-28 1E-32 177.7 17.2 156 1-159 48-218 (357)
41 3bg1_A Protein SEC13 homolog; 100.0 1.1E-28 3.7E-33 177.2 14.6 153 1-155 19-199 (316)
42 3f3f_A Nucleoporin SEH1; struc 100.0 8.5E-28 2.9E-32 173.0 19.1 154 1-156 17-251 (351)
43 2ymu_A WD-40 repeat protein; u 100.0 4.4E-28 1.5E-32 186.1 18.5 148 1-154 391-539 (577)
44 3dwl_C Actin-related protein 2 100.0 9E-29 3.1E-33 180.9 13.8 155 1-157 61-239 (377)
45 2xzm_R RACK1; ribosome, transl 100.0 1.9E-27 6.5E-32 172.4 20.4 148 4-154 35-203 (343)
46 4e54_B DNA damage-binding prot 100.0 5.1E-28 1.7E-32 180.5 17.8 155 1-159 125-287 (435)
47 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-27 6.3E-32 189.0 20.2 154 1-157 19-175 (814)
48 3bg1_A Protein SEC13 homolog; 100.0 5.3E-28 1.8E-32 173.6 15.4 152 1-154 63-247 (316)
49 2j04_B YDR362CP, TAU91; beta p 100.0 2.8E-28 9.6E-33 185.5 14.2 151 1-155 272-429 (524)
50 2pm9_A Protein WEB1, protein t 100.0 2.3E-27 7.9E-32 175.2 18.5 157 1-159 171-342 (416)
51 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-27 4.1E-32 192.2 18.0 149 1-152 441-659 (902)
52 3sfz_A APAF-1, apoptotic pepti 100.0 2.7E-27 9.1E-32 195.5 20.5 153 1-156 621-776 (1249)
53 4e54_B DNA damage-binding prot 100.0 1.3E-27 4.3E-32 178.4 16.9 152 1-156 170-329 (435)
54 1gxr_A ESG1, transducin-like e 100.0 5.5E-27 1.9E-31 168.5 19.3 155 1-158 57-218 (337)
55 1sq9_A Antiviral protein SKI8; 100.0 3.6E-27 1.2E-31 173.3 18.6 152 1-155 192-396 (397)
56 3ei3_B DNA damage-binding prot 100.0 6.4E-27 2.2E-31 171.6 19.9 151 1-155 79-237 (383)
57 3jrp_A Fusion protein of prote 100.0 3E-27 1E-31 172.3 18.0 154 1-156 17-193 (379)
58 3zwl_B Eukaryotic translation 100.0 1.2E-26 4E-31 168.5 20.9 155 1-158 38-253 (369)
59 1r5m_A SIR4-interacting protei 100.0 3.8E-27 1.3E-31 174.1 18.3 150 1-153 253-424 (425)
60 1gxr_A ESG1, transducin-like e 100.0 1.2E-26 4E-31 166.8 20.2 153 1-157 103-258 (337)
61 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.8E-27 1.6E-31 175.9 18.8 155 1-158 108-275 (450)
62 3dw8_B Serine/threonine-protei 100.0 5.2E-27 1.8E-31 174.9 18.4 154 1-157 34-261 (447)
63 4aez_A CDC20, WD repeat-contai 100.0 1.2E-26 4.2E-31 171.4 20.1 155 1-159 140-298 (401)
64 4ggc_A P55CDC, cell division c 100.0 2.6E-26 8.8E-31 164.0 21.2 153 1-155 73-316 (318)
65 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-26 3.9E-31 169.1 19.4 151 1-154 14-173 (372)
66 3ei3_B DNA damage-binding prot 100.0 1.9E-26 6.6E-31 169.0 20.6 152 1-158 124-286 (383)
67 3zwl_B Eukaryotic translation 100.0 1.4E-26 4.9E-31 168.1 19.5 157 1-161 181-353 (369)
68 3i2n_A WD repeat-containing pr 100.0 1.1E-26 3.6E-31 168.3 18.7 151 2-156 175-355 (357)
69 2aq5_A Coronin-1A; WD40 repeat 100.0 8.1E-27 2.8E-31 172.3 18.4 155 2-158 41-211 (402)
70 2j04_B YDR362CP, TAU91; beta p 100.0 4.8E-27 1.6E-31 178.7 17.2 155 1-157 213-389 (524)
71 2xyi_A Probable histone-bindin 100.0 1.1E-26 3.8E-31 173.1 18.7 156 1-158 237-414 (430)
72 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-26 4.1E-31 168.1 17.9 153 1-156 131-294 (343)
73 1k8k_C P40, ARP2/3 complex 41 100.0 2E-26 7E-31 167.8 19.1 155 1-157 58-236 (372)
74 4aow_A Guanine nucleotide-bind 100.0 2.6E-26 8.7E-31 165.4 19.4 150 2-156 178-339 (340)
75 3k26_A Polycomb protein EED; W 100.0 4.4E-27 1.5E-31 170.7 15.5 152 1-157 75-263 (366)
76 3lrv_A PRE-mRNA-splicing facto 100.0 3.3E-26 1.1E-30 165.9 19.7 152 2-159 83-249 (343)
77 3jrp_A Fusion protein of prote 99.9 3.6E-26 1.2E-30 166.6 19.9 153 1-155 61-241 (379)
78 3k26_A Polycomb protein EED; W 99.9 2.5E-26 8.6E-31 166.8 18.6 153 1-156 24-194 (366)
79 3odt_A Protein DOA1; ubiquitin 99.9 8.9E-26 3E-30 160.7 20.2 150 2-159 149-301 (313)
80 4a11_B DNA excision repair pro 99.9 7.7E-26 2.6E-30 166.4 20.3 152 6-159 155-370 (408)
81 3dw8_B Serine/threonine-protei 99.9 1.5E-26 5.3E-31 172.4 16.7 153 1-157 183-376 (447)
82 3dm0_A Maltose-binding peripla 99.9 5.7E-26 2E-30 178.3 20.5 154 1-157 388-553 (694)
83 4aez_A CDC20, WD repeat-contai 99.9 4.6E-26 1.6E-30 168.3 18.8 155 1-159 223-385 (401)
84 4gga_A P55CDC, cell division c 99.9 6.8E-26 2.3E-30 168.3 19.4 153 2-158 237-399 (420)
85 3v7d_B Cell division control p 99.9 1.3E-25 4.3E-30 168.5 20.9 154 1-158 168-345 (464)
86 3mmy_A MRNA export factor; mRN 99.9 8E-26 2.7E-30 164.1 18.7 110 1-113 45-162 (368)
87 2j04_A TAU60, YPL007P, hypothe 99.9 3.5E-26 1.2E-30 172.6 17.1 147 1-157 91-257 (588)
88 2oaj_A Protein SNI1; WD40 repe 99.9 4.1E-26 1.4E-30 183.4 18.3 151 1-157 64-245 (902)
89 3mkq_A Coatomer beta'-subunit; 99.9 5E-26 1.7E-30 180.8 18.3 156 1-157 61-220 (814)
90 2xyi_A Probable histone-bindin 99.9 1.4E-25 4.8E-30 167.2 19.4 153 1-155 187-354 (430)
91 3gre_A Serine/threonine-protei 99.9 3.4E-26 1.2E-30 170.4 16.0 156 1-158 69-249 (437)
92 3gre_A Serine/threonine-protei 99.9 6.7E-26 2.3E-30 168.8 16.9 154 3-159 178-364 (437)
93 2pm9_A Protein WEB1, protein t 99.9 9.6E-26 3.3E-30 166.6 17.1 154 1-155 73-250 (416)
94 4gq1_A NUP37; propeller, trans 99.9 8.1E-26 2.8E-30 166.7 15.8 153 3-158 97-290 (393)
95 1r5m_A SIR4-interacting protei 99.9 2.2E-25 7.5E-30 164.6 18.2 151 1-156 212-363 (425)
96 1pgu_A Actin interacting prote 99.9 1.3E-25 4.4E-30 173.2 17.5 145 7-154 456-614 (615)
97 3i2n_A WD repeat-containing pr 99.9 1.8E-25 6.1E-30 161.9 17.1 153 2-158 124-295 (357)
98 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.8E-25 1.3E-29 165.6 19.3 149 1-152 155-337 (450)
99 1pgu_A Actin interacting prote 99.9 4.8E-25 1.6E-29 170.0 20.3 159 1-161 24-245 (615)
100 3vu4_A KMHSV2; beta-propeller 99.9 5.5E-25 1.9E-29 160.3 19.4 152 2-156 65-273 (355)
101 3jro_A Fusion protein of prote 99.9 1E-25 3.6E-30 178.3 16.3 153 1-155 15-190 (753)
102 3jro_A Fusion protein of prote 99.9 4E-25 1.4E-29 174.9 19.7 154 1-156 59-240 (753)
103 3mmy_A MRNA export factor; mRN 99.9 1.7E-25 6E-30 162.3 15.9 151 1-155 92-347 (368)
104 4a11_B DNA excision repair pro 99.9 8.2E-25 2.8E-29 160.9 19.4 152 1-156 49-220 (408)
105 1sq9_A Antiviral protein SKI8; 99.9 3.3E-25 1.1E-29 162.9 17.1 155 1-158 68-271 (397)
106 4ggc_A P55CDC, cell division c 99.9 2.6E-24 9E-29 153.5 21.0 152 1-158 31-185 (318)
107 4aow_A Guanine nucleotide-bind 99.9 1.5E-24 5.3E-29 156.1 19.0 156 1-158 92-250 (340)
108 3v7d_B Cell division control p 99.9 2.3E-24 8E-29 161.6 19.9 151 2-159 275-426 (464)
109 1yfq_A Cell cycle arrest prote 99.9 1.1E-24 3.8E-29 157.0 16.8 147 1-154 17-179 (342)
110 3odt_A Protein DOA1; ubiquitin 99.9 5.6E-24 1.9E-28 151.4 19.3 148 1-155 24-175 (313)
111 3sfz_A APAF-1, apoptotic pepti 99.9 3.4E-24 1.2E-28 177.0 20.3 154 1-157 663-874 (1249)
112 2j04_A TAU60, YPL007P, hypothe 99.9 2.6E-24 9E-29 162.5 17.0 145 1-153 135-296 (588)
113 2ovr_B FBW7, F-BOX/WD repeat p 99.9 9.3E-24 3.2E-28 157.8 19.4 147 2-157 124-271 (445)
114 1p22_A F-BOX/WD-repeat protein 99.9 1.3E-23 4.5E-28 156.7 19.7 148 2-158 138-289 (435)
115 1yfq_A Cell cycle arrest prote 99.9 2.5E-24 8.4E-29 155.2 15.3 154 1-159 107-287 (342)
116 4gga_A P55CDC, cell division c 99.9 1.1E-23 3.9E-28 156.4 19.2 154 1-158 153-314 (420)
117 3vu4_A KMHSV2; beta-propeller 99.9 7.1E-24 2.4E-28 154.4 17.6 152 2-156 144-338 (355)
118 4gq1_A NUP37; propeller, trans 99.9 2.5E-24 8.5E-29 158.8 15.1 156 1-158 142-352 (393)
119 1p22_A F-BOX/WD-repeat protein 99.9 4.3E-24 1.5E-28 159.3 16.4 147 4-158 263-418 (435)
120 2w18_A PALB2, fancn, partner a 99.9 6.2E-23 2.1E-27 146.6 18.2 141 16-161 156-321 (356)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.8E-22 6.2E-27 150.8 20.9 145 6-158 168-312 (445)
122 2oit_A Nucleoporin 214KDA; NH2 99.9 3.4E-23 1.2E-27 154.5 14.7 152 1-155 98-279 (434)
123 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-23 4.4E-28 156.8 12.1 150 1-153 42-222 (434)
124 3bws_A Protein LP49; two-domai 99.9 3E-22 1E-26 148.8 18.4 153 1-157 128-295 (433)
125 1l0q_A Surface layer protein; 99.9 1.3E-21 4.4E-26 143.6 19.7 152 1-158 37-193 (391)
126 1l0q_A Surface layer protein; 99.9 2.9E-21 1E-25 141.7 19.6 151 1-157 121-278 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-20 5.7E-25 139.3 19.3 152 1-158 184-348 (415)
128 4h5i_A Guanine nucleotide-exch 99.9 9.8E-22 3.3E-26 143.7 12.3 109 1-111 225-343 (365)
129 3bws_A Protein LP49; two-domai 99.9 1.4E-20 4.7E-25 139.9 17.5 152 1-157 175-337 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.2E-19 4E-24 134.8 17.8 151 1-158 228-391 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.8 1.7E-19 5.9E-24 142.3 17.0 141 1-145 42-230 (741)
132 1xfd_A DIP, dipeptidyl aminope 99.8 1E-19 3.6E-24 143.1 12.5 140 1-144 22-193 (723)
133 2ojh_A Uncharacterized protein 99.8 1.5E-18 5.2E-23 122.0 16.9 153 1-157 90-261 (297)
134 3vgz_A Uncharacterized protein 99.8 1.3E-17 4.5E-22 120.5 19.9 154 1-157 94-265 (353)
135 2ojh_A Uncharacterized protein 99.8 3E-18 1E-22 120.5 15.8 149 1-153 47-203 (297)
136 1nir_A Nitrite reductase; hemo 99.8 5.4E-18 1.8E-22 129.8 18.2 151 2-156 144-313 (543)
137 1pby_B Quinohemoprotein amine 99.8 6.5E-18 2.2E-22 121.2 17.3 151 1-159 87-315 (337)
138 1nir_A Nitrite reductase; hemo 99.8 6.4E-18 2.2E-22 129.4 17.8 153 1-158 184-359 (543)
139 3vgz_A Uncharacterized protein 99.8 1.7E-17 5.9E-22 119.9 18.3 154 1-158 146-307 (353)
140 1ri6_A Putative isomerase YBHE 99.8 1.2E-17 4E-22 120.1 16.9 151 1-154 43-209 (343)
141 1xfd_A DIP, dipeptidyl aminope 99.8 1.8E-18 6.2E-23 136.1 13.0 153 1-156 66-291 (723)
142 3u4y_A Uncharacterized protein 99.8 5.6E-17 1.9E-21 116.4 18.5 148 2-154 4-160 (331)
143 2ecf_A Dipeptidyl peptidase IV 99.8 7E-18 2.4E-22 133.2 14.6 151 1-157 114-324 (741)
144 3u4y_A Uncharacterized protein 99.8 4.5E-17 1.5E-21 116.9 17.4 152 1-157 45-210 (331)
145 1k32_A Tricorn protease; prote 99.8 9.8E-18 3.4E-22 137.0 14.8 149 1-156 301-463 (1045)
146 1z68_A Fibroblast activation p 99.8 8.7E-18 3E-22 132.3 13.8 137 1-144 21-189 (719)
147 3o4h_A Acylamino-acid-releasin 99.8 1.6E-17 5.3E-22 128.1 14.1 143 2-152 116-274 (582)
148 3hfq_A Uncharacterized protein 99.8 8.7E-17 3E-21 116.3 17.0 152 1-154 45-218 (347)
149 1jmx_B Amine dehydrogenase; ox 99.8 3E-17 1E-21 118.3 13.9 149 1-159 97-330 (349)
150 1k32_A Tricorn protease; prote 99.8 5.1E-17 1.7E-21 132.8 16.7 147 2-154 344-502 (1045)
151 2z3z_A Dipeptidyl aminopeptida 99.7 4.9E-17 1.7E-21 127.8 14.7 149 1-155 87-294 (706)
152 3scy_A Hypothetical bacterial 99.7 4.4E-16 1.5E-20 113.3 18.6 150 1-153 160-336 (361)
153 3hfq_A Uncharacterized protein 99.7 5.7E-16 2E-20 112.0 19.0 151 1-153 146-316 (347)
154 2z3z_A Dipeptidyl aminopeptida 99.7 3.3E-17 1.1E-21 128.8 13.0 150 1-153 126-341 (706)
155 1jmx_B Amine dehydrogenase; ox 99.7 1.9E-16 6.5E-21 114.1 16.0 151 1-157 5-178 (349)
156 1ri6_A Putative isomerase YBHE 99.7 1.7E-16 5.7E-21 114.1 15.2 142 8-154 5-160 (343)
157 1z68_A Fibroblast activation p 99.7 1.8E-17 6.2E-22 130.5 10.7 154 1-159 65-296 (719)
158 3o4h_A Acylamino-acid-releasin 99.7 8.1E-17 2.8E-21 124.1 14.0 151 1-158 27-231 (582)
159 1pby_B Quinohemoprotein amine 99.7 6.7E-16 2.3E-20 110.7 16.8 145 8-157 2-166 (337)
160 1jof_A Carboxy-CIS,CIS-muconat 99.7 4.2E-16 1.4E-20 113.7 14.3 151 1-153 45-223 (365)
161 4a5s_A Dipeptidyl peptidase 4 99.7 4E-16 1.4E-20 123.5 15.0 137 1-143 22-190 (740)
162 3azo_A Aminopeptidase; POP fam 99.7 1.3E-15 4.5E-20 118.9 15.5 152 1-155 135-326 (662)
163 3pe7_A Oligogalacturonate lyas 99.7 4.1E-15 1.4E-19 108.9 16.9 152 2-157 42-228 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.1E-14 3.9E-19 106.1 18.0 153 1-153 88-290 (365)
165 3scy_A Hypothetical bacterial 99.7 2E-14 6.9E-19 104.4 19.0 152 1-155 55-243 (361)
166 4a5s_A Dipeptidyl peptidase 4 99.7 1.7E-15 5.9E-20 119.8 13.7 150 2-156 68-296 (740)
167 3azo_A Aminopeptidase; POP fam 99.6 6.4E-15 2.2E-19 115.0 14.7 150 4-156 87-276 (662)
168 1q7f_A NHL, brain tumor CG1071 99.6 7.5E-14 2.6E-18 98.3 18.8 149 1-155 126-281 (286)
169 3pe7_A Oligogalacturonate lyas 99.6 6.5E-14 2.2E-18 102.5 17.7 153 1-157 86-276 (388)
170 3fvz_A Peptidyl-glycine alpha- 99.6 2.3E-13 7.9E-18 97.9 19.1 154 1-156 29-229 (329)
171 2oiz_A Aromatic amine dehydrog 99.6 5.5E-14 1.9E-18 102.5 15.1 150 1-155 55-335 (361)
172 3fvz_A Peptidyl-glycine alpha- 99.6 1.1E-13 3.9E-18 99.6 15.9 152 1-155 148-323 (329)
173 2xdw_A Prolyl endopeptidase; a 99.6 8.5E-14 2.9E-18 109.8 15.5 153 1-156 130-322 (710)
174 1xip_A Nucleoporin NUP159; bet 99.6 1.2E-13 3.9E-18 101.1 13.6 139 1-156 43-193 (388)
175 3c5m_A Oligogalacturonate lyas 99.5 3.8E-14 1.3E-18 103.8 10.4 152 2-156 87-275 (396)
176 2dg1_A DRP35, lactonase; beta 99.5 1.6E-12 5.5E-17 93.4 17.4 150 1-154 50-213 (333)
177 3c5m_A Oligogalacturonate lyas 99.5 1.2E-13 4.2E-18 101.1 10.8 152 1-156 41-227 (396)
178 2xdw_A Prolyl endopeptidase; a 99.5 4.3E-12 1.5E-16 100.1 19.8 154 1-155 176-369 (710)
179 1q7f_A NHL, brain tumor CG1071 99.5 4.1E-12 1.4E-16 89.4 17.5 149 2-154 83-238 (286)
180 2gop_A Trilobed protease; beta 99.5 1.2E-12 4E-17 94.5 14.8 140 1-154 109-291 (347)
181 3e5z_A Putative gluconolactona 99.5 2.4E-12 8.2E-17 91.1 16.1 147 1-153 33-201 (296)
182 1rwi_B Serine/threonine-protei 99.5 3.1E-12 1.1E-16 89.1 16.1 154 1-157 113-267 (270)
183 3no2_A Uncharacterized protein 99.5 1.6E-12 5.4E-17 91.4 14.4 144 6-156 4-156 (276)
184 2bkl_A Prolyl endopeptidase; m 99.5 4.6E-13 1.6E-17 105.4 12.8 151 1-156 126-306 (695)
185 3no2_A Uncharacterized protein 99.5 3.9E-12 1.3E-16 89.4 15.2 148 2-157 43-198 (276)
186 2gop_A Trilobed protease; beta 99.5 2.9E-12 1E-16 92.4 14.5 139 1-151 64-250 (347)
187 3dsm_A Uncharacterized protein 99.5 1.3E-11 4.4E-16 88.8 17.4 150 1-157 89-256 (328)
188 2oiz_A Aromatic amine dehydrog 99.5 5.6E-12 1.9E-16 91.9 15.6 143 5-154 13-182 (361)
189 1qks_A Cytochrome CD1 nitrite 99.5 1.3E-11 4.6E-16 94.8 18.3 150 5-157 165-376 (567)
190 1rwi_B Serine/threonine-protei 99.4 1.9E-11 6.4E-16 85.1 16.6 152 1-156 72-224 (270)
191 3e5z_A Putative gluconolactona 99.4 2.6E-11 8.9E-16 85.8 17.3 150 1-159 120-291 (296)
192 2dg1_A DRP35, lactonase; beta 99.4 7.4E-12 2.5E-16 89.9 14.3 148 1-154 11-171 (333)
193 1xip_A Nucleoporin NUP159; bet 99.4 6.6E-12 2.3E-16 91.9 13.8 127 1-141 93-231 (388)
194 2bkl_A Prolyl endopeptidase; m 99.4 3.8E-11 1.3E-15 94.5 18.2 149 1-153 173-348 (695)
195 2mad_H Methylamine dehydrogena 99.4 8.5E-11 2.9E-15 86.1 18.8 156 1-160 71-356 (373)
196 1yr2_A Prolyl oligopeptidase; 99.4 1.1E-11 3.7E-16 98.3 15.0 149 2-155 169-351 (741)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.6E-10 5.3E-15 82.1 16.7 150 1-154 122-299 (314)
198 1qks_A Cytochrome CD1 nitrite 99.3 5.1E-10 1.8E-14 86.1 19.1 152 1-154 202-421 (567)
199 3dsm_A Uncharacterized protein 99.3 3.3E-10 1.1E-14 81.5 17.0 145 7-157 54-215 (328)
200 1yr2_A Prolyl oligopeptidase; 99.3 4.8E-10 1.6E-14 88.9 19.3 149 1-153 214-392 (741)
201 2z2n_A Virginiamycin B lyase; 99.3 1.1E-09 3.7E-14 77.0 18.3 146 1-152 62-211 (299)
202 2z2n_A Virginiamycin B lyase; 99.3 1.9E-09 6.5E-14 75.8 18.2 147 1-153 104-254 (299)
203 3sjl_D Methylamine dehydrogena 99.2 8.4E-10 2.9E-14 80.7 16.3 144 3-154 40-208 (386)
204 3hrp_A Uncharacterized protein 99.2 7.6E-10 2.6E-14 82.0 16.4 150 1-154 136-298 (409)
205 3g4e_A Regucalcin; six bladed 99.2 8.2E-10 2.8E-14 78.3 15.5 139 1-142 103-260 (297)
206 2hz6_A Endoplasmic reticulum t 99.2 2.1E-12 7.1E-17 94.5 2.0 144 6-158 8-153 (369)
207 3iuj_A Prolyl endopeptidase; h 99.2 7.2E-10 2.5E-14 87.3 14.7 151 2-156 135-316 (693)
208 3dr2_A Exported gluconolactona 99.2 1.6E-09 5.3E-14 77.1 15.0 145 2-154 51-224 (305)
209 2mad_H Methylamine dehydrogena 99.2 6E-09 2.1E-13 76.3 17.9 142 4-156 29-197 (373)
210 3g4e_A Regucalcin; six bladed 99.2 8E-09 2.7E-13 73.1 18.1 151 1-156 59-231 (297)
211 2qc5_A Streptogramin B lactona 99.2 9.4E-09 3.2E-13 72.3 18.0 147 1-153 25-175 (300)
212 3iuj_A Prolyl endopeptidase; h 99.2 5.6E-09 1.9E-13 82.3 18.4 151 1-156 180-361 (693)
213 3hrp_A Uncharacterized protein 99.2 1.1E-08 3.6E-13 75.9 18.8 148 1-153 224-409 (409)
214 2qc5_A Streptogramin B lactona 99.1 1.6E-08 5.4E-13 71.1 18.2 146 2-153 68-217 (300)
215 1mda_H Methylamine dehydrogena 99.1 7.1E-10 2.4E-14 80.9 11.3 160 1-162 70-354 (368)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2.4E-08 8.2E-13 70.8 17.8 150 1-156 76-258 (314)
217 3c75_H MADH, methylamine dehyd 99.1 1.4E-08 4.7E-13 75.4 16.9 158 1-160 182-408 (426)
218 3sjl_D Methylamine dehydrogena 99.1 9.2E-09 3.1E-13 75.2 14.3 151 1-156 83-258 (386)
219 2ghs_A AGR_C_1268P; regucalcin 99.0 8.1E-08 2.8E-12 68.9 19.1 148 1-154 95-260 (326)
220 3dr2_A Exported gluconolactona 99.0 1.4E-08 4.9E-13 72.1 14.0 143 1-151 136-303 (305)
221 2iwa_A Glutamine cyclotransfer 99.0 1.1E-07 3.6E-12 66.2 17.8 156 1-162 26-189 (266)
222 2ghs_A AGR_C_1268P; regucalcin 99.0 7.1E-08 2.4E-12 69.2 17.3 136 2-142 140-290 (326)
223 2hz6_A Endoplasmic reticulum t 99.0 3.1E-11 1.1E-15 88.3 -1.3 144 4-157 46-195 (369)
224 3c75_H MADH, methylamine dehyd 99.0 3.1E-08 1.1E-12 73.5 14.3 113 5-121 82-219 (426)
225 2qe8_A Uncharacterized protein 98.9 1.3E-07 4.4E-12 68.3 16.9 149 1-151 22-223 (343)
226 2qe8_A Uncharacterized protein 98.9 2.4E-08 8.1E-13 72.2 12.9 146 1-147 125-314 (343)
227 2ece_A 462AA long hypothetical 98.9 1.6E-07 5.5E-12 69.6 16.1 150 2-154 144-352 (462)
228 3nol_A Glutamine cyclotransfer 98.9 2.2E-07 7.6E-12 64.1 15.6 153 2-161 49-208 (262)
229 2ece_A 462AA long hypothetical 98.9 2.1E-07 7.1E-12 69.0 16.2 145 5-152 93-287 (462)
230 1fwx_A Nitrous oxide reductase 98.9 1.3E-07 4.5E-12 72.3 15.4 145 5-154 145-361 (595)
231 1yiq_A Quinohemoprotein alcoho 98.9 1.6E-07 5.5E-12 74.0 16.4 154 2-158 241-509 (689)
232 1kb0_A Quinohemoprotein alcoho 98.9 1.4E-07 4.6E-12 74.3 15.2 154 2-159 249-512 (677)
233 1kb0_A Quinohemoprotein alcoho 98.8 2.3E-07 7.9E-12 73.0 15.8 144 8-154 328-567 (677)
234 3nok_A Glutaminyl cyclase; bet 98.8 6.1E-07 2.1E-11 62.0 15.5 153 2-162 61-218 (268)
235 2iwa_A Glutamine cyclotransfer 98.8 6.5E-07 2.2E-11 62.3 15.7 148 5-156 73-239 (266)
236 1npe_A Nidogen, entactin; glyc 98.8 4.9E-06 1.7E-10 57.8 20.4 151 1-155 41-199 (267)
237 1fwx_A Nitrous oxide reductase 98.8 6.3E-07 2.2E-11 68.6 16.0 146 5-155 99-309 (595)
238 3tc9_A Hypothetical hydrolase; 98.8 1.9E-06 6.4E-11 64.3 18.4 149 1-154 142-301 (430)
239 2xe4_A Oligopeptidase B; hydro 98.7 7.5E-07 2.6E-11 70.9 15.5 150 2-154 180-354 (751)
240 1yiq_A Quinohemoprotein alcoho 98.7 7.2E-07 2.5E-11 70.4 14.2 129 9-139 321-533 (689)
241 3mbr_X Glutamine cyclotransfer 98.7 1.3E-05 4.5E-10 54.8 18.2 152 2-160 27-185 (243)
242 2fp8_A Strictosidine synthase; 98.7 4.2E-06 1.5E-10 59.7 16.7 149 1-154 24-216 (322)
243 3q7m_A Lipoprotein YFGL, BAMB; 98.6 6.7E-06 2.3E-10 59.9 17.1 145 6-157 52-210 (376)
244 1npe_A Nidogen, entactin; glyc 98.6 3.6E-05 1.2E-09 53.4 19.4 151 1-157 84-241 (267)
245 3nol_A Glutamine cyclotransfer 98.5 9.2E-06 3.1E-10 56.1 14.6 136 4-143 93-244 (262)
246 3q7m_A Lipoprotein YFGL, BAMB; 98.5 1E-05 3.5E-10 58.9 15.9 136 7-151 239-375 (376)
247 1kv9_A Type II quinohemoprotei 98.5 8.1E-06 2.8E-10 64.2 15.5 153 2-158 236-492 (668)
248 1mda_H Methylamine dehydrogena 98.5 1.5E-06 5.1E-11 63.4 10.5 125 18-154 47-194 (368)
249 3mbr_X Glutamine cyclotransfer 98.5 2.3E-05 7.9E-10 53.6 15.5 133 6-142 73-222 (243)
250 3hxj_A Pyrrolo-quinoline quino 98.5 4.4E-06 1.5E-10 59.5 12.6 136 7-153 107-243 (330)
251 3nok_A Glutaminyl cyclase; bet 98.5 2.3E-05 7.7E-10 54.3 15.2 135 4-142 102-253 (268)
252 3qqz_A Putative uncharacterize 98.5 9E-05 3.1E-09 51.2 18.1 153 1-155 32-205 (255)
253 3hxj_A Pyrrolo-quinoline quino 98.4 8.1E-06 2.8E-10 58.1 12.9 141 4-156 185-326 (330)
254 2fp8_A Strictosidine synthase; 98.4 3.2E-05 1.1E-09 55.1 15.6 135 17-156 165-315 (322)
255 4hw6_A Hypothetical protein, I 98.4 6.8E-05 2.3E-09 56.0 17.1 147 1-153 144-303 (433)
256 3v64_C Agrin; beta propeller, 98.4 0.00028 9.4E-09 51.1 19.9 152 1-155 78-235 (349)
257 3kya_A Putative phosphatase; s 98.4 0.00013 4.5E-09 55.1 18.3 152 1-153 144-340 (496)
258 2ad6_A Methanol dehydrogenase 98.3 1.8E-05 6.1E-10 61.2 13.4 129 9-140 318-523 (571)
259 3amr_A 3-phytase; beta-propell 98.3 0.00029 1E-08 50.8 18.5 144 5-153 38-209 (355)
260 2ad6_A Methanol dehydrogenase 98.3 8E-05 2.8E-09 57.5 16.6 137 18-158 273-498 (571)
261 1ijq_A LDL receptor, low-densi 98.3 0.00038 1.3E-08 49.6 20.3 149 1-154 35-195 (316)
262 2xe4_A Oligopeptidase B; hydro 98.3 9.5E-05 3.3E-09 59.0 17.0 149 1-152 226-398 (751)
263 1flg_A Protein (quinoprotein e 98.3 4.5E-05 1.5E-09 59.1 14.7 79 58-139 465-544 (582)
264 2p9w_A MAL S 1 allergenic prot 98.3 0.00023 7.9E-09 50.8 16.7 151 2-154 19-215 (334)
265 2p4o_A Hypothetical protein; p 98.2 0.00037 1.3E-08 49.3 17.8 147 1-154 37-198 (306)
266 3qqz_A Putative uncharacterize 98.2 0.00044 1.5E-08 47.8 17.8 149 2-152 76-251 (255)
267 1w6s_A Methanol dehydrogenase 98.2 0.00016 5.6E-09 56.1 16.7 78 58-138 452-530 (599)
268 2p4o_A Hypothetical protein; p 98.2 0.00027 9.3E-09 50.0 16.0 150 1-154 77-242 (306)
269 3v65_B Low-density lipoprotein 98.2 0.00046 1.6E-08 50.7 17.3 152 1-155 121-278 (386)
270 1flg_A Protein (quinoprotein e 98.1 0.00016 5.6E-09 55.9 15.2 56 101-158 465-520 (582)
271 3p5b_L Low density lipoprotein 98.1 0.0013 4.3E-08 48.6 20.2 153 1-156 117-279 (400)
272 3v65_B Low-density lipoprotein 98.1 0.0011 3.8E-08 48.6 18.0 150 2-155 165-319 (386)
273 1w6s_A Methanol dehydrogenase 98.1 0.00047 1.6E-08 53.6 16.5 57 100-158 451-507 (599)
274 1kv9_A Type II quinohemoprotei 98.1 0.00022 7.6E-09 56.1 14.8 149 6-158 116-337 (668)
275 4hw6_A Hypothetical protein, I 98.0 0.0011 3.7E-08 49.5 17.1 150 1-153 233-432 (433)
276 3kya_A Putative phosphatase; s 97.9 0.0013 4.3E-08 49.9 16.4 155 1-158 252-479 (496)
277 3v64_C Agrin; beta propeller, 97.9 0.0025 8.7E-08 46.1 19.1 150 2-155 122-276 (349)
278 3sov_A LRP-6, low-density lipo 97.9 0.0024 8.4E-08 45.6 18.8 150 2-155 41-198 (318)
279 3m0c_C LDL receptor, low-densi 97.9 0.0057 1.9E-07 49.2 19.9 152 2-156 430-591 (791)
280 3tc9_A Hypothetical hydrolase; 97.9 0.0024 8.1E-08 47.6 16.6 151 1-153 231-429 (430)
281 1n7d_A LDL receptor, low-densi 97.8 0.00018 6.1E-09 57.0 10.8 152 1-155 411-572 (699)
282 1k3i_A Galactose oxidase precu 97.8 0.00033 1.1E-08 55.0 12.1 112 2-114 192-326 (656)
283 3pbp_A Nucleoporin NUP82; beta 97.8 0.0051 1.7E-07 45.6 18.0 142 6-150 31-208 (452)
284 3amr_A 3-phytase; beta-propell 97.8 0.0051 1.7E-07 44.4 17.0 136 16-153 98-262 (355)
285 3sov_A LRP-6, low-density lipo 97.7 0.0052 1.8E-07 43.8 19.3 151 2-156 85-240 (318)
286 3p5b_L Low density lipoprotein 97.6 0.0096 3.3E-07 43.9 19.0 151 2-156 165-322 (400)
287 1ijq_A LDL receptor, low-densi 97.6 0.0077 2.6E-07 42.8 20.3 150 2-156 83-240 (316)
288 4a2l_A BT_4663, two-component 97.6 0.014 4.8E-07 46.8 18.7 141 10-156 370-528 (795)
289 1tl2_A L10, protein (tachylect 97.6 0.0019 6.5E-08 43.5 11.0 141 1-152 46-206 (236)
290 3sre_A PON1, serum paraoxonase 97.6 0.01 3.5E-07 43.0 18.7 149 2-154 56-252 (355)
291 2ism_A Putative oxidoreductase 97.6 0.0029 9.9E-08 45.8 12.8 95 1-98 36-152 (352)
292 3m0c_C LDL receptor, low-densi 97.6 0.022 7.5E-07 45.9 19.6 151 1-155 476-633 (791)
293 3s94_A LRP-6, low-density lipo 97.5 0.011 3.9E-07 46.1 16.3 152 1-156 89-245 (619)
294 2p9w_A MAL S 1 allergenic prot 97.5 0.012 4.1E-07 42.2 15.0 148 4-154 74-265 (334)
295 3s25_A Hypothetical 7-bladed b 97.5 0.012 4.2E-07 41.6 16.2 139 3-156 60-218 (302)
296 3das_A Putative oxidoreductase 97.5 0.012 4.1E-07 42.6 14.6 138 1-141 37-219 (347)
297 3a9g_A Putative uncharacterize 97.4 0.0081 2.8E-07 43.5 13.9 135 1-140 34-214 (354)
298 4a2l_A BT_4663, two-component 97.4 0.031 1.1E-06 44.9 18.9 141 5-155 415-572 (795)
299 1n7d_A LDL receptor, low-densi 97.4 0.002 6.8E-08 51.1 11.2 151 2-156 459-616 (699)
300 2vpj_A Kelch-like protein 12; 97.4 0.016 5.5E-07 40.6 14.7 143 6-156 112-280 (301)
301 1k3i_A Galactose oxidase precu 97.4 0.006 2E-07 47.9 13.5 115 42-156 190-325 (656)
302 3s94_A LRP-6, low-density lipo 97.4 0.031 1.1E-06 43.7 19.6 152 1-156 45-204 (619)
303 3pbp_A Nucleoporin NUP82; beta 97.3 0.0041 1.4E-07 46.1 10.9 105 2-108 72-209 (452)
304 1cru_A Protein (soluble quinop 97.3 0.02 6.9E-07 43.0 14.8 99 1-99 32-162 (454)
305 4a0p_A LRP6, LRP-6, low-densit 97.3 0.042 1.4E-06 43.1 20.7 150 1-155 42-198 (628)
306 4a0p_A LRP6, LRP-6, low-densit 97.3 0.045 1.5E-06 42.9 20.0 149 2-156 86-239 (628)
307 2xn4_A Kelch-like protein 2; s 97.2 0.026 8.9E-07 39.6 14.7 144 6-156 108-278 (302)
308 3ii7_A Kelch-like protein 7; p 97.2 0.025 8.6E-07 39.7 14.0 144 6-156 55-227 (306)
309 2g8s_A Glucose/sorbosone dehyd 97.1 0.02 6.7E-07 41.5 12.8 136 1-139 23-213 (353)
310 3ii7_A Kelch-like protein 7; p 97.1 0.036 1.2E-06 38.9 14.3 143 6-156 101-274 (306)
311 2xbg_A YCF48-like protein; pho 97.1 0.04 1.4E-06 39.3 16.3 144 2-152 169-320 (327)
312 3v9f_A Two-component system se 97.1 0.082 2.8E-06 42.3 17.3 140 10-156 420-570 (781)
313 2vpj_A Kelch-like protein 12; 97.0 0.041 1.4E-06 38.5 16.0 143 6-156 62-233 (301)
314 4asc_A Kelch repeat and BTB do 97.0 0.037 1.3E-06 39.1 13.3 144 6-156 98-279 (315)
315 1zgk_A Kelch-like ECH-associat 97.0 0.052 1.8E-06 38.2 14.2 144 6-156 121-289 (308)
316 1zgk_A Kelch-like ECH-associat 96.8 0.066 2.2E-06 37.7 13.4 144 6-156 70-242 (308)
317 2xn4_A Kelch-like protein 2; s 96.8 0.065 2.2E-06 37.5 14.5 143 6-156 61-231 (302)
318 2woz_A Kelch repeat and BTB do 96.8 0.066 2.2E-06 37.8 13.0 143 6-156 109-289 (318)
319 2xzh_A Clathrin heavy chain 1; 96.8 0.085 2.9E-06 37.9 15.1 152 3-156 159-334 (365)
320 1tl2_A L10, protein (tachylect 96.8 0.04 1.4E-06 37.2 10.8 131 7-148 4-157 (236)
321 4asc_A Kelch repeat and BTB do 96.5 0.11 3.9E-06 36.5 14.5 144 6-156 45-223 (315)
322 2xbg_A YCF48-like protein; pho 96.5 0.12 4.2E-06 36.8 17.9 109 35-148 160-273 (327)
323 3v9f_A Two-component system se 96.5 0.25 8.6E-06 39.6 16.4 141 9-155 375-525 (781)
324 3sbq_A Nitrous-oxide reductase 96.4 0.097 3.3E-06 40.3 12.2 103 37-142 322-453 (638)
325 3a9g_A Putative uncharacterize 96.3 0.15 5.2E-06 36.8 12.4 101 38-142 29-153 (354)
326 2ism_A Putative oxidoreductase 96.3 0.19 6.6E-06 36.2 13.5 102 38-142 31-153 (352)
327 2be1_A Serine/threonine-protei 96.2 0.015 5E-07 42.0 6.7 113 7-120 10-139 (339)
328 3s25_A Hypothetical 7-bladed b 96.1 0.21 7E-06 35.4 14.5 137 3-156 21-178 (302)
329 1bpo_A Protein (clathrin); cla 96.1 0.28 9.4E-06 36.8 17.6 152 3-156 158-333 (494)
330 2woz_A Kelch repeat and BTB do 96.0 0.24 8.2E-06 34.9 13.8 143 6-156 56-233 (318)
331 2uvk_A YJHT; unknown function, 95.8 0.32 1.1E-05 34.8 13.0 137 17-157 168-345 (357)
332 2uvk_A YJHT; unknown function, 95.8 0.33 1.1E-05 34.8 13.2 53 6-58 65-128 (357)
333 3ei3_A DNA damage-binding prot 95.5 1 3.4E-05 38.2 17.9 146 3-153 469-635 (1158)
334 2zwa_A Leucine carboxyl methyl 95.3 0.65 2.2E-05 36.9 13.2 147 6-156 451-637 (695)
335 1xi4_A Clathrin heavy chain; a 95.2 0.53 1.8E-05 40.6 12.8 142 17-162 125-297 (1630)
336 3das_A Putative oxidoreductase 94.9 0.74 2.5E-05 33.3 12.5 105 37-142 31-158 (347)
337 2xzh_A Clathrin heavy chain 1; 94.4 0.99 3.4E-05 32.6 17.6 144 3-155 74-237 (365)
338 1cru_A Protein (soluble quinop 94.0 1.4 4.8E-05 33.0 13.8 105 38-143 27-163 (454)
339 2be1_A Serine/threonine-protei 93.9 0.21 7.1E-06 36.0 6.7 107 50-158 11-134 (339)
340 2zwa_A Leucine carboxyl methyl 93.6 2.2 7.6E-05 33.9 16.3 148 6-156 397-579 (695)
341 1xi4_A Clathrin heavy chain; a 93.4 2 6.8E-05 37.3 12.4 152 3-156 158-333 (1630)
342 2g8s_A Glucose/sorbosone dehyd 93.4 1.6 5.3E-05 31.5 15.5 50 91-141 288-340 (353)
343 3ei3_A DNA damage-binding prot 92.7 4.2 0.00014 34.5 16.6 143 6-150 895-1058(1158)
344 1bpo_A Protein (clathrin); cla 92.5 2.7 9.1E-05 31.7 19.6 72 3-78 73-144 (494)
345 3sbq_A Nitrous-oxide reductase 92.2 2 6.8E-05 33.4 9.9 69 85-155 326-409 (638)
346 3zwu_A Alkaline phosphatase PH 90.4 1.4 4.8E-05 34.3 7.8 57 85-141 479-548 (592)
347 2wg3_C Hedgehog-interacting pr 90.4 4.6 0.00016 30.4 10.9 48 1-48 19-79 (463)
348 3zwu_A Alkaline phosphatase PH 90.0 1.1 3.7E-05 35.0 6.9 55 1-55 481-548 (592)
349 3sre_A PON1, serum paraoxonase 88.6 5.5 0.00019 28.9 13.3 105 38-142 50-183 (355)
350 4a9v_A PHOX; hydrolase, beta-p 87.9 1.9 6.5E-05 33.5 6.9 55 1-55 481-548 (592)
351 4a9v_A PHOX; hydrolase, beta-p 87.8 3.9 0.00013 31.8 8.5 59 84-142 478-549 (592)
352 4gq2_M Nucleoporin NUP120; bet 86.0 5.2 0.00018 33.1 8.9 35 84-118 238-273 (950)
353 4gq2_M Nucleoporin NUP120; bet 85.5 4.8 0.00016 33.4 8.5 31 3-33 243-273 (950)
354 2wg3_C Hedgehog-interacting pr 84.9 11 0.00036 28.5 13.6 30 38-67 14-44 (463)
355 4fhn_B Nucleoporin NUP120; pro 84.5 4.7 0.00016 34.1 8.2 31 88-118 245-275 (1139)
356 3no0_A DNA gyrase subunit A; D 83.9 8.7 0.0003 26.7 15.7 143 8-156 36-198 (276)
357 3ott_A Two-component system se 81.1 19 0.00066 28.7 17.1 137 10-155 115-261 (758)
358 3uc1_A DNA gyrase subunit A; D 80.0 14 0.00048 26.4 18.8 146 6-155 108-280 (327)
359 4fhn_B Nucleoporin NUP120; pro 78.6 3 0.0001 35.3 5.0 31 3-33 245-275 (1139)
360 3f7f_A Nucleoporin NUP120; nuc 78.1 4.3 0.00015 32.4 5.4 30 89-118 228-257 (729)
361 3qhy_B Beta-lactamase inhibito 77.2 16 0.00053 25.4 14.0 129 16-157 119-249 (282)
362 3no0_A DNA gyrase subunit A; D 76.5 16 0.00056 25.3 17.7 146 6-156 79-248 (276)
363 3f7f_A Nucleoporin NUP120; nuc 73.5 5.1 0.00018 32.0 4.8 31 4-34 228-258 (729)
364 1suu_A DNA gyrase subunit A; t 73.1 22 0.00075 25.1 18.6 145 5-154 6-181 (312)
365 3qhy_B Beta-lactamase inhibito 69.8 25 0.00084 24.4 13.9 88 16-110 41-128 (282)
366 3ott_A Two-component system se 62.1 59 0.002 25.9 16.6 140 5-154 481-626 (758)
367 4gz8_A Semaphorin-3A; multi-do 56.0 63 0.0021 25.8 7.8 55 9-63 431-495 (667)
368 1q47_A Semaphorin 3A; beta pro 55.3 58 0.002 24.8 7.4 56 94-149 423-487 (495)
369 3al9_A Plexin-A2; beta-propell 52.7 37 0.0013 26.2 6.0 57 93-149 414-476 (539)
370 1zvt_A Topoisomerase IV subuni 51.3 55 0.0019 22.3 16.4 145 8-155 3-164 (256)
371 3uc1_A DNA gyrase subunit A; D 46.5 77 0.0026 22.6 18.5 115 37-155 94-229 (327)
372 1q47_A Semaphorin 3A; beta pro 46.5 95 0.0033 23.7 7.6 55 9-63 423-487 (495)
373 3nvq_A Semaphorin-7A; beta-pro 44.3 1.1E+02 0.0037 24.1 7.4 55 9-63 382-444 (590)
374 3ol2_B Plexin-B1; beta-propell 43.0 74 0.0025 24.5 6.3 56 94-149 402-461 (528)
375 1zi0_A DNA gyrase subunit A; b 41.5 89 0.0031 21.9 18.3 146 6-155 108-278 (307)
376 1wp5_A Topoisomerase IV; broke 40.0 98 0.0034 22.0 17.4 148 5-155 3-175 (323)
377 1suu_A DNA gyrase subunit A; t 37.7 1E+02 0.0036 21.6 18.4 114 38-155 100-232 (312)
378 1zi0_A DNA gyrase subunit A; b 35.6 1.1E+02 0.0039 21.4 18.7 146 5-155 1-177 (307)
379 3nvq_A Semaphorin-7A; beta-pro 35.4 1.6E+02 0.0055 23.1 7.3 55 94-149 382-444 (590)
380 4gz8_A Semaphorin-3A; multi-do 34.3 1.8E+02 0.0061 23.3 7.3 55 94-149 431-495 (667)
381 3al9_A Plexin-A2; beta-propell 33.5 77 0.0026 24.5 5.1 56 8-63 414-476 (539)
382 3mez_B Mannose-specific lectin 31.5 78 0.0027 18.3 7.7 25 128-154 60-84 (113)
383 3l6v_A GYRA, DNA gyrase subuni 31.1 1.5E+02 0.0052 21.5 19.3 151 2-155 2-181 (370)
384 1wp5_A Topoisomerase IV; broke 30.0 1.5E+02 0.0051 21.0 18.7 144 7-154 50-225 (323)
385 3oky_A Plexin-A2; transmembran 29.0 1.8E+02 0.006 23.4 6.5 57 93-149 413-475 (681)
386 1olz_A Semaphorin 4D; developm 25.1 2.6E+02 0.009 22.3 7.7 55 9-63 417-477 (663)
387 3ol2_B Plexin-B1; beta-propell 24.6 2.2E+02 0.0074 22.0 6.1 55 9-63 402-461 (528)
388 3oky_B Putative uncharacterize 23.4 2.7E+02 0.0092 21.8 6.9 27 37-63 469-495 (565)
389 1sqj_A OXG-RCBH, oligoxylogluc 22.4 3.1E+02 0.011 22.2 15.5 54 1-55 20-82 (789)
390 3oky_B Putative uncharacterize 21.1 3E+02 0.01 21.5 7.1 25 125-149 471-495 (565)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=201.32 Aligned_cols=150 Identities=12% Similarity=0.238 Sum_probs=141.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.|+.|++||++. +.....+.+ |
T Consensus 170 ~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~-h 247 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSG-H 247 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECC-C
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999986 567778888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
...+.++ |+|++++|++++.|+.|++||+++++++..+.+|.+ .|.+++|+|++++|++++.|+.|++||..
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD-QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999 899999999999999999999999999999999976 89999999999999999999999999963
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-32 Score=196.66 Aligned_cols=154 Identities=16% Similarity=0.243 Sum_probs=141.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++||+.++..+..+..|..+|.+++|+|++++|++++.|+.|++||+.+ ++.+..+.+ |
T Consensus 19 ~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~-~~~~~~~~~-h 96 (304)
T 2ynn_A 19 IDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEA-H 96 (304)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC-CcEEEEEeC-C
Confidence 57999999999999999999999999999999999999999999999999999999999999999986 577888899 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccC-eeeeecccCCCcceeEEEeeC-CCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
...+.++ |+|+++++++|+.|+.|++||++++ .....+.+|.. .|.+++|+| ++..|++++.|+.|++||+++...
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-CEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc
Confidence 9999999 8999999999999999999999887 45567888866 899999999 678999999999999999976543
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=195.59 Aligned_cols=155 Identities=15% Similarity=0.289 Sum_probs=145.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.++.|++|++..++....+..|...+.+++|+|++++|++++.|+.|++||++. +..+..+.+ |
T Consensus 128 ~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~-h 205 (321)
T 3ow8_A 128 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEG-H 205 (321)
T ss_dssp EEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC-C
T ss_pred EEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEcc-c
Confidence 47999999999999999999999999998888888999999999999999999999999999999986 577788888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
..++.++ |+|++++|++++.|+.|++||+++++....+.+|.. .|.+++|+|++++|++++.|+.|++||+++....
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS-WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 9999999 899999999999999999999999999999999976 8999999999999999999999999999876644
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.8e-32 Score=196.76 Aligned_cols=157 Identities=19% Similarity=0.198 Sum_probs=134.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCC-CEEEEecCCCeEEEEEeCCcccccceeee-
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~- 78 (188)
|+|+|++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|+.|++||++. ++....+..
T Consensus 133 v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~ 211 (344)
T 4gqb_B 133 VSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCS 211 (344)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC--
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecc
Confidence 4799999999999999999999999999999999999999999999988 4788999999999999986 455554432
Q ss_pred ccCCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCC-CEEEEEeCCCcEEEEeCCCc
Q 029743 79 LSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR-KFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 79 ~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~ 155 (188)
.+...+.++ |+| +++++++|+.|+.|++||+++++++..+.+|.. .|++++|+|++ ++|++++.|++|+|||+++.
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~-~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ-CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS-CEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 045567788 787 566889999999999999999999999999976 89999999998 57899999999999999887
Q ss_pred cCCC
Q 029743 156 LKGS 159 (188)
Q Consensus 156 ~~~~ 159 (188)
+...
T Consensus 291 ~~~~ 294 (344)
T 4gqb_B 291 ELFR 294 (344)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6443
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.5e-32 Score=200.66 Aligned_cols=154 Identities=14% Similarity=0.275 Sum_probs=145.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.. ..++..+.+ |
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~-~~~~~~~~~-h 191 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG-FECIRTMHG-H 191 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS-SCEEECCCC-C
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeEEEcC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999975 577888888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
...|.++ |+|+++++++++.|+.|++||++++.++..+.+|.. .|.++.|+|++.+|++++.|+.|++||+.+...
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE-WVRMVRPNQDGTLIASCSNDQTVRVWVVATKEC 268 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc-cEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 9999999 899999999999999999999999999999999976 899999999999999999999999999987653
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4e-31 Score=189.16 Aligned_cols=154 Identities=15% Similarity=0.285 Sum_probs=144.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||++. +..+..+.+ |
T Consensus 29 ~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~-~ 106 (312)
T 4ery_A 29 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS-GKCLKTLKG-H 106 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC-CcEEEEEcC-C
Confidence 47999999999999999999999999998889999999999999999999999999999999999986 577788888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
...+.++ |+|+++++++++.|+.|++||+++++++..+..|.. +|.+++|+|++++|++++.|+.|++||+++...
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce
Confidence 9999999 899999999999999999999999999999988866 899999999999999999999999999987653
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.2e-31 Score=187.86 Aligned_cols=156 Identities=18% Similarity=0.192 Sum_probs=135.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCC-ceeeeecccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCccccccee-e
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKN-TVQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF-V 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-~ 77 (188)
++|+|++++|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..|++++.|+.|++||++.. .....+ .
T Consensus 103 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~-~~~~~~~~ 181 (304)
T 2ynn_A 103 IAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-TPNFTLTT 181 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS-SCSEEEEC
T ss_pred EEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-Cccceecc
Confidence 479999999999999999999999877 45567789999999999999 6789999999999999999764 333334 3
Q ss_pred eccCCceeEE-ee--cCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 78 GLSPNSVDAL-LK--LDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 78 ~~~~~~v~~~-~~--~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
+ +...+..+ ++ ++++++++++.|+.|++||+++++++..+.+|.. .|.+++|+|++++|++++.|+.|++||+++
T Consensus 182 ~-~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 182 G-QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS-NVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp C-CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred C-CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCC-CEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 4 55677777 65 4788999999999999999999999999999976 899999999999999999999999999988
Q ss_pred ccCCC
Q 029743 155 ILKGS 159 (188)
Q Consensus 155 ~~~~~ 159 (188)
.....
T Consensus 260 ~~~~~ 264 (304)
T 2ynn_A 260 YKVEK 264 (304)
T ss_dssp CCEEE
T ss_pred Cceee
Confidence 76443
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.2e-31 Score=189.07 Aligned_cols=153 Identities=20% Similarity=0.300 Sum_probs=141.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|+.|++||++ +.++..+.+ |
T Consensus 71 ~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--~~~~~~~~~-h 147 (319)
T 3frx_A 71 CTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK--GQCLATLLG-H 147 (319)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT--SCEEEEECC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEec-c
Confidence 4689999999999999999999999999999999999999999999999999999999999999996 467778888 9
Q ss_pred CCceeEE-eecC------CCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 81 PNSVDAL-LKLD------EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 81 ~~~v~~~-~~~~------~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
...+.++ ++|. +.++++++.|+.|++||+++.+....+.+|.. .|.+++|+|++++|++++.|+.|++||+.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS-NINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS-CEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 9999999 7774 55899999999999999999999889999976 89999999999999999999999999998
Q ss_pred CccC
Q 029743 154 DILK 157 (188)
Q Consensus 154 ~~~~ 157 (188)
+...
T Consensus 227 ~~~~ 230 (319)
T 3frx_A 227 AKKA 230 (319)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7654
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.98 E-value=5.1e-31 Score=191.00 Aligned_cols=149 Identities=15% Similarity=0.260 Sum_probs=134.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-c
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-L 79 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~ 79 (188)
++|+|+++++++|+.|+.|++||+.++.....+.+|...|.+++|+|++++|++++.|+.|++||++. ...+..+.. .
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~~~~ 268 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA-DQELMTYSHDN 268 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-CcEEEEEccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999986 344444432 0
Q ss_pred cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
+...+.++ |+|+|+++++|+.|+.|++||+.+++.+..+.+|.. +|.+++|+|++.+|++++.|+.|++||
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN-RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC-cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 23468888 899999999999999999999999999999999976 899999999999999999999999997
No 10
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=1.1e-30 Score=191.02 Aligned_cols=151 Identities=14% Similarity=0.143 Sum_probs=121.4
Q ss_pred CeeecccCeEEEEe--CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc-------
Q 029743 1 MTFAADAMKLLGTS--GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD------- 71 (188)
Q Consensus 1 l~~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~------- 71 (188)
++|||||+++++++ .|++|+|||+++++++..+. |...|.+++|+|+|+++++++.++ +.+|+......
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~ 216 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDF 216 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCC
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecC
Confidence 47999999987654 68999999999998877765 667788888888888888877554 44444322100
Q ss_pred --------------------------------------------ccceeeeccCCceeEE-eecCCCEEEEecCCCeEEE
Q 029743 72 --------------------------------------------CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISL 106 (188)
Q Consensus 72 --------------------------------------------~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~ 106 (188)
....+.+ |...|.++ |+|+|++|++|+.|+.|+|
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 0112234 66778899 8999999999999999999
Q ss_pred EecccCeeeeec-ccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 107 VGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 107 ~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
||+++++++..+ .+|.. +|++++|+||+++|++++.|++|+||++...
T Consensus 296 wd~~~~~~~~~~~~gH~~-~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 296 VKLKDLSMSKIFKQAHSF-AITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTTTEEEEEETTSSSS-CEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EECCCCcEEEEecCcccC-CEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999998874 78876 8999999999999999999999999999654
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-30 Score=188.56 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=130.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC-------CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc---
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--- 70 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--- 70 (188)
++|+|++++|++++.|++|++|++.. .+.+..+.+|...|.+++|+|++++|++++.|+.|++||++..+
T Consensus 64 v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe
Confidence 47999999999999999999999853 34566788999999999999999999999999999999995322
Q ss_pred cccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccC--eeeeecccCCCcceeEEEeeCC--CCEEEEEeCCC
Q 029743 71 DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN--RIIQPIAEHSEYPIESLALSHD--RKFLGSISHDS 145 (188)
Q Consensus 71 ~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 145 (188)
.++..+.+ |...+.++ |+|++.+|++++.|+.|++||+.++ +++..+.+|.. .|.+++|+|+ +.+|++++.|+
T Consensus 144 ~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 144 ECISVLQE-HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG-TVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEEEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECCSSSSCEEEEEETTS
T ss_pred EEEEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC-cEEEEEecCCCCeeEEEEEeCCC
Confidence 34566788 99999999 8999999999999999999999876 67788899976 8999999998 67899999999
Q ss_pred cEEEEeCCCc
Q 029743 146 MLKLWDLDDI 155 (188)
Q Consensus 146 ~i~iwd~~~~ 155 (188)
+|++||++..
T Consensus 222 ~v~iw~~~~~ 231 (330)
T 2hes_X 222 TVRVWKYMGD 231 (330)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEecCC
Confidence 9999998764
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=1.9e-30 Score=188.35 Aligned_cols=152 Identities=17% Similarity=0.206 Sum_probs=135.4
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCC--ceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc--ccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~ 76 (188)
++|+|++++|++++.|+++++|++..+ +.+..+.+|...|.+++|+|++++|++++.|+.|++||++... .++..+
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 479999999999999999999999876 4567788999999999999999999999999999999997532 345567
Q ss_pred eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCe--eeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
.+ |...+.++ |+|++++|++++.|+.|++|+++++. +...+.+|.. .|.+++|+|++++|++++.|+.|++|++.
T Consensus 147 ~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~-~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 147 NS-HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHES-TVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp CC-CCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cC-cCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCC-ceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 77 88999999 89999999999999999999998775 4567888866 89999999999999999999999999974
Q ss_pred C
Q 029743 154 D 154 (188)
Q Consensus 154 ~ 154 (188)
.
T Consensus 225 ~ 225 (345)
T 3fm0_A 225 L 225 (345)
T ss_dssp C
T ss_pred c
Confidence 3
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=1.9e-30 Score=192.38 Aligned_cols=155 Identities=15% Similarity=0.240 Sum_probs=143.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++|+.|++|++||+.++.++..+.+|...|.++.++|++++|++++.|+.|++||+.. +.+...+.+ |
T Consensus 198 v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-~~~~~~~~~-h 275 (410)
T 1vyh_C 198 VSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAELRE-H 275 (410)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECC-C
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-CceeeEecC-C
Confidence 47899999999999999999999999999999999999999999999999999999999999999986 577778888 9
Q ss_pred CCceeEE-eecC--------------------CCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEE
Q 029743 81 PNSVDAL-LKLD--------------------EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG 139 (188)
Q Consensus 81 ~~~v~~~-~~~~--------------------~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 139 (188)
...+.++ |+|+ |.++++|+.|+.|++||++++.++..+.+|.. .|.+++|+|++++|+
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~-~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN-WVRGVLFHSGGKFIL 354 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS-CEEEEEECSSSSCEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC-cEEEEEEcCCCCEEE
Confidence 9999999 8885 67899999999999999999999999999976 899999999999999
Q ss_pred EEeCCCcEEEEeCCCccCC
Q 029743 140 SISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 140 ~~~~d~~i~iwd~~~~~~~ 158 (188)
+++.|+.|++||+.+....
T Consensus 355 s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 355 SCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp EEETTTEEEEECCTTSCCC
T ss_pred EEeCCCeEEEEECCCCceE
Confidence 9999999999999876543
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=189.58 Aligned_cols=153 Identities=14% Similarity=0.213 Sum_probs=134.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceee---eecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc-ccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT---RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-DCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~ 76 (188)
++|+|+|++|++|+.|++|+||++..+.... ...+|...|.+++|+|++++|++++.|+.+++|++.... .++..+
T Consensus 22 l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 5799999999999999999999998875332 235899999999999999999999999999999997532 456778
Q ss_pred eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCe---eeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR---IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
.+ |...|.++ |+|++++|++++.|+.|++||++++. ++..+.+|.. .|.+++|+|++++|++++.|+.|++||+
T Consensus 102 ~~-h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 102 EG-HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-DVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS-CEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred cC-CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC-CeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 88 99999999 89999999999999999999998653 4566778866 8999999999999999999999999998
Q ss_pred CCc
Q 029743 153 DDI 155 (188)
Q Consensus 153 ~~~ 155 (188)
++.
T Consensus 180 ~~~ 182 (345)
T 3fm0_A 180 EED 182 (345)
T ss_dssp ETT
T ss_pred cCC
Confidence 764
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=1.5e-30 Score=189.84 Aligned_cols=155 Identities=13% Similarity=0.164 Sum_probs=119.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCC-EEEEecCCCeEEEEEeCCc----------
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYF---------- 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~---------- 69 (188)
|+|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++. .+++++.|+.|++||++..
T Consensus 145 v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~ 224 (357)
T 4g56_B 145 LSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA 224 (357)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc
Confidence 47999999999999999999999999888777777777777666666543 4445555555555554321
Q ss_pred ----------------------------------ccccceeeeccCCceeEE-eecCC-CEEEEecCCCeEEEEecccCe
Q 029743 70 ----------------------------------KDCSDRFVGLSPNSVDAL-LKLDE-DRVITGSENGLISLVGILPNR 113 (188)
Q Consensus 70 ----------------------------------~~~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~v~~~d~~~~~ 113 (188)
+.++..+.+ |...+.++ |+|++ ++|++++.|+.|+|||+++++
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec-cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 344555666 88889999 89987 578999999999999999998
Q ss_pred eeeecccCCCcceeEEEeeC-CCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 114 IIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 114 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
++..+ +|.+ .|++++|+| ++++|++++.|+.|++|++......
T Consensus 304 ~~~~~-~H~~-~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 304 VFRDL-SHRD-FVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp EEEEC-CCSS-CEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EeEEC-CCCC-CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 87665 6766 899999998 7899999999999999999765433
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=6.2e-30 Score=182.98 Aligned_cols=155 Identities=17% Similarity=0.294 Sum_probs=141.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. +..+..+.. |
T Consensus 71 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~-~ 148 (312)
T 4ery_A 71 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTLPA-H 148 (312)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECC-C
T ss_pred EEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CEEEEEecC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999986 567777888 8
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
..++.++ |+|+++++++++.|+.|++||+++++.+..+..+...++..++|+|++++|++++.|+.|++||+++...
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 8999999 8999999999999999999999998887776544344799999999999999999999999999987653
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=8.4e-30 Score=187.95 Aligned_cols=152 Identities=19% Similarity=0.307 Sum_probs=133.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. +.+...+. +
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~-~~~~~~~~--~ 205 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT-GQCSLTLS--I 205 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE--C
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC-CeeEEEEE--c
Confidence 47999999999999999999999999999999999999999999999999999999999999999986 45555554 4
Q ss_pred CCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeec-------ccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 81 PNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPI-------AEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 81 ~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
...+.++ ++| +++++++++.|+.|++||++++..+..+ .+|.. .|.+++|+|++++|++++.|+.|++||
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD-SVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS-CEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC-CEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 5667777 788 8999999999999999999998877665 46755 899999999999999999999999999
Q ss_pred CCCcc
Q 029743 152 LDDIL 156 (188)
Q Consensus 152 ~~~~~ 156 (188)
+++..
T Consensus 285 ~~~~~ 289 (393)
T 1erj_A 285 LQNAN 289 (393)
T ss_dssp C----
T ss_pred CCCCC
Confidence 98654
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.2e-29 Score=183.77 Aligned_cols=154 Identities=20% Similarity=0.300 Sum_probs=139.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc---cccceee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK---DCSDRFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---~~~~~~~ 77 (188)
++|+|++++|++++.|++|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+++|++.... .....+.
T Consensus 61 ~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~ 140 (340)
T 1got_B 61 MHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA 140 (340)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec
Confidence 4799999999999999999999999999988999999999999999999999999999999999997532 2345567
Q ss_pred eccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 78 GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
+ |...+.++ |++++. +++++.|+.|++||+++++++..+.+|.+ .|.+++|+|++++|++++.|+.|++||+++..
T Consensus 141 ~-h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 141 G-HTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp C-CSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred C-CCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 8 88999999 777764 88999999999999999999999999976 89999999999999999999999999998765
Q ss_pred C
Q 029743 157 K 157 (188)
Q Consensus 157 ~ 157 (188)
.
T Consensus 218 ~ 218 (340)
T 1got_B 218 C 218 (340)
T ss_dssp E
T ss_pred e
Confidence 4
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=7.5e-30 Score=187.46 Aligned_cols=152 Identities=22% Similarity=0.311 Sum_probs=131.1
Q ss_pred eeec-ccCeEEEEeCCCcEEEEEcC-CCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeec
Q 029743 2 TFAA-DAMKLLGTSGDGTLSVCNLR-KNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (188)
Q Consensus 2 ~~s~-~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (188)
+|+| ++++|++|+.|+.|++||++ .+..+..+.+|...|.+++|+|++++|++++.|++|++||++. +..+..+..
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~- 289 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNR- 289 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECC-
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecc-
Confidence 4555 78999999999999999997 4577778889999999999999999999999999999999986 455555543
Q ss_pred cC-------CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeec----ccCCCcceeEEEeeCCCCEEEEEeCCCcE
Q 029743 80 SP-------NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI----AEHSEYPIESLALSHDRKFLGSISHDSML 147 (188)
Q Consensus 80 ~~-------~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 147 (188)
+. ..+.++ |+|+|+++++|+.||.|++||+.+++.+..+ .+|.+ .|.+++|+|++++|++++.|+.|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG-RISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC-CCCEEEECSSSSEEEEECTTSCE
T ss_pred cccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC-ceEEEEECCCCCEEEEeeCCCCE
Confidence 22 247788 8999999999999999999999988877665 56755 89999999999999999999999
Q ss_pred EEEeCCCcc
Q 029743 148 KLWDLDDIL 156 (188)
Q Consensus 148 ~iwd~~~~~ 156 (188)
++|++....
T Consensus 369 ~iW~~~~~~ 377 (380)
T 3iz6_a 369 KIWAFSGHR 377 (380)
T ss_dssp EEEECCSSS
T ss_pred EEEecCCCc
Confidence 999998653
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=184.41 Aligned_cols=156 Identities=15% Similarity=0.173 Sum_probs=131.2
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeee----ecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR----SEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
++|+|++ .|++|+.||+|+|||+.+++.+.. ..+|...|.+++|+|++++|++++.|++|++||+.+ +.++..+
T Consensus 88 ~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~-~~~~~~~ 165 (344)
T 4gqb_B 88 LTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ-QVVLSSY 165 (344)
T ss_dssp EEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEE
T ss_pred EEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC-CcEEEEE
Confidence 4789985 688999999999999998865443 347999999999999999999999999999999986 6888889
Q ss_pred eeccCCceeEE-eecCCC-EEEEecCCCeEEEEecccCeeeeecccCC-CcceeEEEeeCC-CCEEEEEeCCCcEEEEeC
Q 029743 77 VGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHD-RKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~ 152 (188)
.+ |...|.++ |+|++. ++++++.|+.|++||++++++...+..+. ...+.+++|+|+ +++|++++.|+.|++||+
T Consensus 166 ~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 166 RA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp CC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred cC-cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 99 99999999 899875 78899999999999999998887764322 236899999995 567889999999999999
Q ss_pred CCccCCC
Q 029743 153 DDILKGS 159 (188)
Q Consensus 153 ~~~~~~~ 159 (188)
++.....
T Consensus 245 ~~~~~~~ 251 (344)
T 4gqb_B 245 KSTSCVL 251 (344)
T ss_dssp CC--CCE
T ss_pred CCCcEEE
Confidence 9876543
No 21
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.7e-29 Score=183.97 Aligned_cols=148 Identities=18% Similarity=0.229 Sum_probs=131.0
Q ss_pred eeec--ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-
Q 029743 2 TFAA--DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (188)
Q Consensus 2 ~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~- 78 (188)
+|+| ++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|+++.|++++.|++|++||++.. ..+..+..
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~~ 281 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD-REVAIYSKE 281 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-EEEEEECCT
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-cEEEEEcCC
Confidence 4555 6789999999999999999999999999999999999999999999999999999999999863 44444433
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
.+...+.++ |+|+++++++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|++++|++++.|+.|++|+
T Consensus 282 ~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~-~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 282 SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN-RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS-CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC-cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 022357778 899999999999999999999999999999999976 899999999999999999999999996
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=4e-29 Score=181.20 Aligned_cols=149 Identities=17% Similarity=0.238 Sum_probs=131.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccccee---e
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF---V 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~---~ 77 (188)
++|+|+++++++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ...... .
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--~~~~~~~~~~ 159 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--ECKFSSAEKE 159 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--CEEEECCTTT
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--Cceeeeeccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999863 222222 2
Q ss_pred eccCCceeEE-eecCC----------CEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCc
Q 029743 78 GLSPNSVDAL-LKLDE----------DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSM 146 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~----------~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 146 (188)
. |...+.++ |+|++ .++++++.|+.|++||. .......+.+|.. .|.+++|+|++++|++++.|+.
T Consensus 160 ~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~-~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 160 N-HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHES-NVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp S-CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSS-CEEEEEECTTSSEEEEEETTCE
T ss_pred C-CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccc-cceEEEECCCCCEEEEEcCCCe
Confidence 5 77889999 88876 78999999999999994 5667778888866 8999999999999999999999
Q ss_pred EEEEeCCC
Q 029743 147 LKLWDLDD 154 (188)
Q Consensus 147 i~iwd~~~ 154 (188)
|++||+..
T Consensus 237 v~iwd~~~ 244 (343)
T 2xzm_R 237 LLIWDILN 244 (343)
T ss_dssp EEEEESSC
T ss_pred EEEEECCC
Confidence 99999954
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=2.2e-29 Score=195.16 Aligned_cols=154 Identities=18% Similarity=0.228 Sum_probs=135.9
Q ss_pred CeeecccC-eEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceee--
Q 029743 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-- 77 (188)
Q Consensus 1 l~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-- 77 (188)
++|+|++. .|++++.|++|++||...++....+.+|...|.+++|+|++++|++++.|++|++||+.. +.....+.
T Consensus 153 v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~ 231 (611)
T 1nr0_A 153 VDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDD 231 (611)
T ss_dssp EEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCT
T ss_pred EEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccc
Confidence 47999987 599999999999999998888889999999999999999999999999999999999875 45555553
Q ss_pred -----eccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeee----------------------------------
Q 029743 78 -----GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP---------------------------------- 117 (188)
Q Consensus 78 -----~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~---------------------------------- 117 (188)
+ |...|.++ |+|+|++|++++.|++|++||+++++++..
T Consensus 232 ~~~~~~-h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 232 SLKNVA-HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 310 (611)
T ss_dssp TSSSCS-SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEE
T ss_pred cccccc-cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEe
Confidence 6 88999999 899999999999999999999987765432
Q ss_pred ---------cccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 118 ---------IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 118 ---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+.+|.. .|.+++|+|++++|++++.|+.|++||+.+...
T Consensus 311 ~~~~~~~~~~~gh~~-~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 311 PELGSIDQVRYGHNK-AITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp TTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCCcceEEcCCCC-CEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 346755 799999999999999999999999999987654
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=3.4e-29 Score=178.28 Aligned_cols=154 Identities=14% Similarity=0.145 Sum_probs=131.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC--CceeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcc-cccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK--NTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~-~~~~~ 75 (188)
++|+|+|++|++|+.|++|+||++.. .+.+..+.+|..+|.+++|++ ++++|++++.|++|++||+.... ..+..
T Consensus 15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~ 94 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAV 94 (297)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEE
Confidence 47999999999999999999999974 356778889999999999986 38999999999999999997532 34556
Q ss_pred eeeccCCceeEE-eecC--CCEEEEecCCCeEEEEecccCe--eeeecccCCCcceeEEEeeCC-------------CCE
Q 029743 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSHD-------------RKF 137 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~~-------------~~~ 137 (188)
+.. |...+.++ |+|+ +.+|++++.|+.|++||++++. ....+.+|.. .|.+++|+|+ +++
T Consensus 95 ~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 95 HAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-CEEEEEECCCC------------CCE
T ss_pred eec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-ccceEeecCCcccccccCCCCCCcce
Confidence 777 88999999 8887 8999999999999999998763 2345677865 8999999997 578
Q ss_pred EEEEeCCCcEEEEeCCCcc
Q 029743 138 LGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~ 156 (188)
|++++.|+.|++||+++..
T Consensus 173 l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 173 FVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp EEEEETTSCEEEEEEETTT
T ss_pred EEEEcCCCcEEEEEEcCCC
Confidence 9999999999999987643
No 25
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=5.3e-29 Score=181.39 Aligned_cols=155 Identities=17% Similarity=0.301 Sum_probs=138.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|+++.|++++.|++|++||+.+++.+..+.+|...|.+++|+| +++.|++++.|+.|++||++. +.++..+..
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~ 238 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS-GQCVQAFET 238 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT-CCEEEEECC
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC-CcEEEEecC
Confidence 36899999999999999999999999999999999999999999988 568999999999999999986 577888888
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCC-CcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
|...+.++ |+|++.++++++.|+.|++||++.+..+..+..+. ...+.+++|+|++++|++++.|+.|++||+.+..
T Consensus 239 -h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 239 -HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred -CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 99999999 89999999999999999999999888776665432 1268899999999999999999999999997765
Q ss_pred C
Q 029743 157 K 157 (188)
Q Consensus 157 ~ 157 (188)
.
T Consensus 318 ~ 318 (354)
T 2pbi_B 318 R 318 (354)
T ss_dssp E
T ss_pred e
Confidence 3
No 26
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=2.3e-29 Score=193.14 Aligned_cols=145 Identities=21% Similarity=0.356 Sum_probs=134.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++|+.. +++++.+.+ |
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~~~~~~~~-h 507 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTG-H 507 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SCEEEEEEC-C
T ss_pred EEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeC-C
Confidence 479999999999999999999996 466777888999999999999999999999999999999964 578888999 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
...|.++ |+|+|++|++++.|+.|++||. +++++..+.+|.+ .|++++|+||+++|++++.|+.|++||
T Consensus 508 ~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~-~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 508 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCC-CEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999 8999999999999999999995 6888889999976 899999999999999999999999997
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=5e-29 Score=193.13 Aligned_cols=154 Identities=16% Similarity=0.206 Sum_probs=130.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc--eeee--------------------------------------------ec
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTR--------------------------------------------SE 34 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~--------------------------------------------~~ 34 (188)
++|+|+|++||+|+.|++|+|||+.+++ .... +.
T Consensus 65 ~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~ 144 (611)
T 1nr0_A 65 AKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT 144 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC
T ss_pred EEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceec
Confidence 4799999999999999999999986432 1111 23
Q ss_pred ccccceEEEEEEeCCC-EEEEecCCCeEEEEEeCCcccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccC
Q 029743 35 FSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN 112 (188)
Q Consensus 35 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~ 112 (188)
+|...|.+++|+|++. .|++++.|++|++||... .++...+.+ |...|.++ |+|+|++|++++.|+.|++||+.++
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 5666777777777765 588999999999999875 566778888 99999999 8999999999999999999999999
Q ss_pred eeeeecc-------cCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 113 RIIQPIA-------EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 113 ~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+++..+. +|.+ .|.+++|+|++++|++++.|++|++||+++...
T Consensus 223 ~~~~~~~~~~~~~~~h~~-~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSG-SVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp CEEEECBCTTSSSCSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEeeeeccccccccccCC-CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 8887774 6766 899999999999999999999999999987653
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.2e-29 Score=178.77 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=123.9
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCC--ceeeee-cc-cccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc------cc
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRS-EF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF------KD 71 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~------~~ 71 (188)
+|+|+ +|++|+.|++|++|++..+ .....+ .+ |...|.+++|+|++++|++++.|+.|++|++... ..
T Consensus 21 ~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 21 DFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCE
T ss_pred ccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccce
Confidence 56666 9999999999999999875 344455 34 9999999999999999999999999999998531 23
Q ss_pred ccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEeccc----CeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCc
Q 029743 72 CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP----NRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSM 146 (188)
Q Consensus 72 ~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 146 (188)
.+..+.+ |...|.++ |+|++++|++++.|+.|++||++. .+++..+.+|.. .|.+++|+|++.+|++++.|+.
T Consensus 99 ~~~~~~~-h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 99 LLAIIEG-HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ-DVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEEEEC-----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS-CEEEEEECSSSSEEEEEETTSC
T ss_pred eEEEEcC-CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC-ceEEEEECCCCCEEEEEcCCCe
Confidence 4566788 99999999 899999999999999999999943 246677888866 8999999999999999999999
Q ss_pred EEEEeCCCc
Q 029743 147 LKLWDLDDI 155 (188)
Q Consensus 147 i~iwd~~~~ 155 (188)
|++||+.+.
T Consensus 177 i~iW~~~~~ 185 (330)
T 2hes_X 177 VRIWKDYDD 185 (330)
T ss_dssp EEEEEEETT
T ss_pred EEEEECCCC
Confidence 999998654
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=1.6e-28 Score=174.90 Aligned_cols=153 Identities=16% Similarity=0.215 Sum_probs=130.6
Q ss_pred Ceeec--ccCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeCCccc-cc
Q 029743 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKD-CS 73 (188)
Q Consensus 1 l~~s~--~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~-~~ 73 (188)
++|+| ++++|++++.|++|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++.... ..
T Consensus 59 v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 59 VDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp EEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC
T ss_pred EEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee
Confidence 36775 48999999999999999998764 45566789999999999997 89999999999999999976422 24
Q ss_pred ceeeeccCCceeEE-eecC-------------CCEEEEecCCCeEEEEecccCe----eeeecccCCCcceeEEEeeCCC
Q 029743 74 DRFVGLSPNSVDAL-LKLD-------------EDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLALSHDR 135 (188)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~-------------~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~ 135 (188)
..+.+ |...+.++ |+|+ +++|++|+.|+.|++||++++. ....+.+|.. .|.+++|+|++
T Consensus 139 ~~~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~-~V~~v~~sp~~ 216 (297)
T 2pm7_B 139 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 216 (297)
T ss_dssp EEEEC-CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred eeeec-ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC-ceEEEEECCCC
Confidence 55677 88999999 8886 5799999999999999998765 5667888976 89999999984
Q ss_pred ---CEEEEEeCCCcEEEEeCCCc
Q 029743 136 ---KFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 136 ---~~l~~~~~d~~i~iwd~~~~ 155 (188)
.+|++++.|++|++||+++.
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESST
T ss_pred CCceEEEEEECCCcEEEEEeCCC
Confidence 88999999999999999764
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=2e-28 Score=179.91 Aligned_cols=156 Identities=18% Similarity=0.220 Sum_probs=136.4
Q ss_pred Ceeecc-cCeEEEEeCCCcEEEEEcCCCceeeee-----cccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCccccc
Q 029743 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRS-----EFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~ 73 (188)
+.|+|+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++++|++++.|+.|++||++.....+
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV 242 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 356775 457999999999999999999887766 57889999999987 88999999999999999998656778
Q ss_pred ceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCC------cceeEEEeeCCCCEEEEEeCCCc
Q 029743 74 DRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSE------YPIESLALSHDRKFLGSISHDSM 146 (188)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d~~ 146 (188)
..+.+ |...|.++ |+|++++|++++.|+.|++||++++.++..+..+.. ..|.+++|+|++++|++++.|+.
T Consensus 243 ~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 243 RTYHG-HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp EEECC-CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred EEECC-cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 88899 99999999 899999999999999999999999998877755422 13889999999999999999999
Q ss_pred EEEEeCCCccC
Q 029743 147 LKLWDLDDILK 157 (188)
Q Consensus 147 i~iwd~~~~~~ 157 (188)
|++||+.....
T Consensus 322 i~vwd~~~~~~ 332 (380)
T 3iz6_a 322 CYVWDTLLAEM 332 (380)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCce
Confidence 99999876543
No 31
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.8e-29 Score=184.65 Aligned_cols=153 Identities=13% Similarity=0.097 Sum_probs=129.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCC--ceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc--ccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK--DCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~ 76 (188)
++|+|++++|++++.|+.|++|++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.... .....+
T Consensus 17 ~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~ 96 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL 96 (377)
T ss_dssp CEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEEC
T ss_pred EEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe
Confidence 589999999999999999999999988 7778888999999999999999999999999999999997632 245556
Q ss_pred eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCe---eeeeccc-CCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR---IIQPIAE-HSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~---~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
.. |...+.++ |+|++++|++++.|+.|++||+++++ ....+.. |.. .|.+++|+|++++|++++.|+.|++||
T Consensus 97 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 97 LR-LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-TILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp CC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-CEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred cc-cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-CeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 67 88999999 89999999999999999999999877 3667776 755 899999999999999999999999999
Q ss_pred CCCc
Q 029743 152 LDDI 155 (188)
Q Consensus 152 ~~~~ 155 (188)
++..
T Consensus 175 ~~~~ 178 (377)
T 3dwl_C 175 AYVR 178 (377)
T ss_dssp ECCS
T ss_pred EEec
Confidence 9643
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=1.4e-28 Score=181.39 Aligned_cols=153 Identities=18% Similarity=0.305 Sum_probs=133.9
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeee-------cccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc---
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-------EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--- 69 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~--- 69 (188)
++|+| ++++|++++.|+.|++||+.++..+..+ .+|...|.+++|+|++++|++++.|+.|++||++..
T Consensus 212 ~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 212 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 36788 8999999999999999999998877665 478899999999999999999999999999998642
Q ss_pred --------ccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeC------C
Q 029743 70 --------KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH------D 134 (188)
Q Consensus 70 --------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~------~ 134 (188)
+.+...+.+ |...+.++ ++|++++|++++.|+.|++||+++++++..+.+|.. .|.+++|++ +
T Consensus 292 ~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~-~v~~v~~~~~~~~~p~ 369 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIG-HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN-SVISVAVANGSSLGPE 369 (393)
T ss_dssp ---------CEEEEEEC-CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEECSSCTTCTT
T ss_pred ccccCCCCCcceEEEec-ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC-CEEEEEecCCcCcCCC
Confidence 123445677 88899999 899999999999999999999999999999999976 899999886 6
Q ss_pred CCEEEEEeCCCcEEEEeCCCc
Q 029743 135 RKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 135 ~~~l~~~~~d~~i~iwd~~~~ 155 (188)
+++|++++.|+.|++|++++.
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEEC
T ss_pred CCEEEEECCCCcEEECccccc
Confidence 889999999999999998754
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.3e-28 Score=175.68 Aligned_cols=152 Identities=20% Similarity=0.273 Sum_probs=134.6
Q ss_pred Ceeeccc-CeEEEEeCCCcEEEEEcCC-----CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccc
Q 029743 1 MTFAADA-MKLLGTSGDGTLSVCNLRK-----NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~~-~~l~~~~~d~~i~i~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 74 (188)
++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++++|++++.|++|++||+.+ ++.+.
T Consensus 23 l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~-~~~~~ 101 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT-GETYQ 101 (319)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEE
T ss_pred EEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC-CCeeE
Confidence 4688854 8999999999999999864 345667889999999999999999999999999999999986 57788
Q ss_pred eeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCC------CCEEEEEeCCCcE
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHD------RKFLGSISHDSML 147 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i 147 (188)
.+.+ |...+.++ ++|++.++++++.|+.|++||++ +.++..+.+|.. .|.++.|+|. +..|++++.|+.|
T Consensus 102 ~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 102 RFVG-HKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND-WVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp EEEC-CSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS-CEEEEEECCC------CCEEEEEETTSCE
T ss_pred EEcc-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC-cEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 8999 99999999 89999999999999999999996 566778888866 8999999985 4489999999999
Q ss_pred EEEeCCCcc
Q 029743 148 KLWDLDDIL 156 (188)
Q Consensus 148 ~iwd~~~~~ 156 (188)
++||+++..
T Consensus 179 ~~wd~~~~~ 187 (319)
T 3frx_A 179 KAWNLNQFQ 187 (319)
T ss_dssp EEEETTTTE
T ss_pred EEEECCcch
Confidence 999998754
No 34
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.6e-28 Score=175.29 Aligned_cols=148 Identities=13% Similarity=0.088 Sum_probs=116.7
Q ss_pred eeec---ccCeEEEEeCCCcEEEEEcCCCceeeeecccc---cceEEEEEEeCCCEE------------EEecCCCeEEE
Q 029743 2 TFAA---DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE---EELTSVVLMKNGRKV------------VCGSQSGTVLL 63 (188)
Q Consensus 2 ~~s~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~~ 63 (188)
+|+| ++.+|++++.|++|+|||++++++++++.+|. ..+.+++|+|+|.++ ++|+.|++|++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 5777 67889999999999999999999999998643 367788999999876 56778999999
Q ss_pred EEeCCccccccee-----eeccCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE
Q 029743 64 YSWGYFKDCSDRF-----VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 64 ~d~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
||..+ +..+..+ .+ |.....+ .+.++.++++++.|++|+|||+++++++.++.+|....+..++|+|||++|
T Consensus 265 Wd~~t-gk~l~v~~~~~p~G-h~~~~ls-g~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 265 INPKT-TLSVGVMLYCLPPG-QAGRFLE-GDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EETTT-TEEEEEEEECCCTT-CCCCEEE-EEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred EECCC-CEEEEEEEeeccCC-CcceeEc-cccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 99976 4544443 24 4433222 234488999999999999999999999999998876334468999999999
Q ss_pred EEEeCCCcEEEEeC
Q 029743 139 GSISHDSMLKLWDL 152 (188)
Q Consensus 139 ~~~~~d~~i~iwd~ 152 (188)
++|+.|++|+|||+
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 99999999999985
No 35
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.1e-28 Score=193.52 Aligned_cols=156 Identities=19% Similarity=0.218 Sum_probs=138.4
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccc---eee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD---RFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~---~~~ 77 (188)
++|+|++++|++|+.|++|++||+.++.....+.+|...|.+++|+|++++|++++.|++|++||+... .... ...
T Consensus 436 v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~-~~~~~~~~~~ 514 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-CKYTISEGGE 514 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC-EEEEECSSTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-cceeeccCCC
Confidence 478999999999999999999999999999999999999999999999999999999999999998532 1111 124
Q ss_pred eccCCceeEE-eecCC--CEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 78 GLSPNSVDAL-LKLDE--DRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~--~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
+ |...+.++ |+|++ ..+++++.|+.|++||++++++...+.+|.+ .|++++|+|++++|++++.|+.|++||+++
T Consensus 515 ~-h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~-~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 515 G-HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG-YVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp S-CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred C-CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 5 77889999 88876 5899999999999999999999999999976 899999999999999999999999999988
Q ss_pred ccCCC
Q 029743 155 ILKGS 159 (188)
Q Consensus 155 ~~~~~ 159 (188)
.....
T Consensus 593 ~~~~~ 597 (694)
T 3dm0_A 593 GKKLY 597 (694)
T ss_dssp TEEEE
T ss_pred CceEE
Confidence 76443
No 36
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.4e-28 Score=182.14 Aligned_cols=154 Identities=13% Similarity=0.164 Sum_probs=137.7
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (188)
.|+|++++|++++.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||+.. +..+..+.+ |.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~-h~ 181 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD-GSNPRTLIG-HR 181 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCCCEEEEC-CS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC-CcCceEEcC-CC
Confidence 5789999999999999999999999988888889999999999999999999999999999999986 577788888 99
Q ss_pred CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCC---C--------------------cceeEEEeeCCCCE
Q 029743 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS---E--------------------YPIESLALSHDRKF 137 (188)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~---~--------------------~~v~~~~~~~~~~~ 137 (188)
..+.++ |+|++++|++++.|+.|++||+++++++..+..+. . ..+.+++|+|++++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 999999 89999999999999999999999999888776432 1 14555667899999
Q ss_pred EEEEeCCCcEEEEeCCCccC
Q 029743 138 LGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~~ 157 (188)
|++++.|+.|++||+++...
T Consensus 262 l~~~~~dg~i~i~d~~~~~~ 281 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQ 281 (420)
T ss_dssp EEEEETTSCEEEEETTTCCE
T ss_pred EEEEcCCCeEEEEECCCCce
Confidence 99999999999999987653
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=1.4e-28 Score=182.24 Aligned_cols=155 Identities=18% Similarity=0.297 Sum_probs=132.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeec-
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL- 79 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~- 79 (188)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. +..+..+...
T Consensus 145 ~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~ 223 (420)
T 3vl1_A 145 LKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT-GTTIHTFNRKE 223 (420)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECBTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-CceeEEeecCC
Confidence 47999999999999999999999999998889999999999999999999999999999999999986 4555555430
Q ss_pred -cC---------------------CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC
Q 029743 80 -SP---------------------NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 80 -~~---------------------~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
+. ..+.++ |+|+++++++++.||.|++||+++++....+.......|.+++|+|+++
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCT
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCC
Confidence 22 334444 5789999999999999999999998877766543234899999999998
Q ss_pred -EEEEEeCCCcEEEEeCCCcc
Q 029743 137 -FLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 137 -~l~~~~~d~~i~iwd~~~~~ 156 (188)
+|++++.|+.|++||+++..
T Consensus 304 ~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 304 NYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp TEEEEEETTSEEEEEETTCTT
T ss_pred CEEEEEeCCCeEEEEEcCCCc
Confidence 99999999999999998764
No 38
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.1e-28 Score=180.75 Aligned_cols=155 Identities=11% Similarity=0.153 Sum_probs=139.0
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCC-------ceeeeecccccceEEEEEEeCC-CEEEEecCCCeEEEEEeCCccc
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKN-------TVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKD 71 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~ 71 (188)
++|+| ++++|++|+.|+.|++|++.++ +.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+.. +.
T Consensus 87 ~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~ 165 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GA 165 (402)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TE
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CC
Confidence 47999 9999999999999999999887 5677788999999999999998 6999999999999999986 56
Q ss_pred cccee--eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeec-ccCCCcceeEEEeeCCCCEEEEE---eCC
Q 029743 72 CSDRF--VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSI---SHD 144 (188)
Q Consensus 72 ~~~~~--~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~---~~d 144 (188)
.+..+ .. |...+.++ |+|++++|++++.|+.|++||+++++.+..+ ..|.+..+..++|+|++++|+++ +.|
T Consensus 166 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d 244 (402)
T 2aq5_A 166 AVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSE 244 (402)
T ss_dssp EEEEECTTT-CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCC
T ss_pred ccEEEecCC-CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCC
Confidence 67777 67 88999999 8999999999999999999999999998888 67765348999999999999998 789
Q ss_pred CcEEEEeCCCccC
Q 029743 145 SMLKLWDLDDILK 157 (188)
Q Consensus 145 ~~i~iwd~~~~~~ 157 (188)
+.|++||+++...
T Consensus 245 ~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 245 RQVALWDTKHLEE 257 (402)
T ss_dssp EEEEEEETTBCSS
T ss_pred ceEEEEcCccccC
Confidence 9999999987654
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=6.7e-28 Score=173.46 Aligned_cols=155 Identities=18% Similarity=0.248 Sum_probs=132.9
Q ss_pred Ceeec--ccCeEEEEeCCCcEEEEEcCCC---------ceeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeC
Q 029743 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKN---------TVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWG 67 (188)
Q Consensus 1 l~~s~--~~~~l~~~~~d~~i~i~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~ 67 (188)
++|+| ++++|++++.|+.|++||+..+ +.+..+..|...|.+++|+|+ +++|++++.|+.|++||++
T Consensus 63 ~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 63 IDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred EEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 46888 6999999999999999999876 456777889999999999999 9999999999999999986
Q ss_pred Cccc-----------------------------------------------------------ccceeeeccCCceeEE-
Q 029743 68 YFKD-----------------------------------------------------------CSDRFVGLSPNSVDAL- 87 (188)
Q Consensus 68 ~~~~-----------------------------------------------------------~~~~~~~~~~~~v~~~- 87 (188)
.... .+..+.+ |...+.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~ 221 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSIS 221 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-CCSCEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-CCcceeEEE
Confidence 4321 0223445 77889999
Q ss_pred eecCC----CEEEEecCCCeEEEEecccC----------------------------------------------eeeee
Q 029743 88 LKLDE----DRVITGSENGLISLVGILPN----------------------------------------------RIIQP 117 (188)
Q Consensus 88 ~~~~~----~~l~~~~~d~~v~~~d~~~~----------------------------------------------~~~~~ 117 (188)
|+|++ ++|++++.||.|++||++.+ +++..
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 89998 89999999999999999875 56677
Q ss_pred cccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 118 IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 118 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+.+|.. .|++++|+|++++|++++.|+.|++|++.+...
T Consensus 302 ~~~h~~-~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 302 HDDHNG-EVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp ECTTSS-CEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred Eecccc-cEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 788866 899999999999999999999999999987653
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=3e-28 Score=177.67 Aligned_cols=156 Identities=17% Similarity=0.217 Sum_probs=124.0
Q ss_pred CeeecccCeEEEEeC------CCcEEEEEcCCCceee----eecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc
Q 029743 1 MTFAADAMKLLGTSG------DGTLSVCNLRKNTVQT----RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK 70 (188)
Q Consensus 1 l~~s~~~~~l~~~~~------d~~i~i~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 70 (188)
++|||||++|++++. |+.|++|+..++.... ....|...|.+++|+|++++ ++++.|++|++||+....
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~ 126 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKE 126 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC------
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccc
Confidence 579999999999997 6789999987765432 33468889999999998765 567789999999997632
Q ss_pred cc-c--ceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC-EEEEEeCCC
Q 029743 71 DC-S--DRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDS 145 (188)
Q Consensus 71 ~~-~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 145 (188)
.. . ....+ |...|.++ |+|++++|++++.|+.|++||+++++++..+.+|.. .|++++|++++. .+++++.|+
T Consensus 127 ~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~dg 204 (357)
T 4g56_B 127 SLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGEDG 204 (357)
T ss_dssp --CCCCEEECC-CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETTS
T ss_pred eeEEEeeccCC-CCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccCC
Confidence 21 1 12346 88899999 899999999999999999999999999999999976 899999999875 788999999
Q ss_pred cEEEEeCCCccCCC
Q 029743 146 MLKLWDLDDILKGS 159 (188)
Q Consensus 146 ~i~iwd~~~~~~~~ 159 (188)
.|++||+++.....
T Consensus 205 ~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 205 RILLWDTRKPKPAT 218 (357)
T ss_dssp CEEECCTTSSSCBC
T ss_pred ceEEEECCCCceee
Confidence 99999998876543
No 41
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.1e-28 Score=177.17 Aligned_cols=153 Identities=17% Similarity=0.193 Sum_probs=130.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcc-cccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~-~~~~~ 75 (188)
++|+|+|++|++|+.|++|++||+.++. .+..+.+|...|.+++|++ ++++|++++.|++|++||++... .....
T Consensus 19 v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~ 98 (316)
T 3bg1_A 19 AQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE 98 (316)
T ss_dssp EEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEE
T ss_pred eeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEE
Confidence 4799999999999999999999998764 4567889999999999986 48999999999999999997532 34556
Q ss_pred eeeccCCceeEE-eecC--CCEEEEecCCCeEEEEecccCe---eeeecccCCCcceeEEEeeCC---------------
Q 029743 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNR---IIQPIAEHSEYPIESLALSHD--------------- 134 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~v~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~--------------- 134 (188)
+.+ |...|.++ |+|+ +.+|++++.|+.|++||++.+. ....+.+|.. .|.+++|+|+
T Consensus 99 ~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 99 HAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI-GCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp ECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS-CBCCCEECCCCCC------CCSCCC
T ss_pred ccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC-CcceEEEccccCCccccccccccCc
Confidence 778 89999999 8987 7899999999999999998753 2455677765 7999999997
Q ss_pred --CCEEEEEeCCCcEEEEeCCCc
Q 029743 135 --RKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 135 --~~~l~~~~~d~~i~iwd~~~~ 155 (188)
+++|++++.|+.|++||++..
T Consensus 177 ~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCCCBEECCBTTSBCCEEEECTT
T ss_pred cccceEEEecCCCeEEEEEeCCC
Confidence 468999999999999999743
No 42
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=8.5e-28 Score=172.95 Aligned_cols=154 Identities=14% Similarity=0.188 Sum_probs=132.4
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCC----ceeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcc----
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK---- 70 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~---- 70 (188)
++|+|++++|++++.|+.|++|++..+ +....+.+|...|.+++|+| ++++|++++.|+.|++||++...
T Consensus 17 ~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 17 VVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred EEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 579999999999999999999999875 45666778999999999999 69999999999999999997632
Q ss_pred ----cccceeeeccCCceeEE-eecC--CCEEEEecCCCeEEEEecccCee-----------------------------
Q 029743 71 ----DCSDRFVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNRI----------------------------- 114 (188)
Q Consensus 71 ----~~~~~~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~v~~~d~~~~~~----------------------------- 114 (188)
..+..+.. |...+.++ |+|+ +.++++++.|+.|++||+++++.
T Consensus 97 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 97 GRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred ccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 34566777 88999999 8998 99999999999999999865431
Q ss_pred -------------------------------eeecccCCCcceeEEEeeCCC----CEEEEEeCCCcEEEEeCCCcc
Q 029743 115 -------------------------------IQPIAEHSEYPIESLALSHDR----KFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 115 -------------------------------~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~~ 156 (188)
+..+.+|.. .|.+++|+|++ ++|++++.|+.|++||++...
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS-CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc-ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 334556755 89999999998 899999999999999998754
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=4.4e-28 Score=186.07 Aligned_cols=148 Identities=20% Similarity=0.341 Sum_probs=135.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.. +..+..+.+ |
T Consensus 391 ~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~-~ 466 (577)
T 2ymu_A 391 VAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTG-H 466 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcC-C
Confidence 479999999999999999999995 567778888999999999999999999999999999999974 467788888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
...+.++ |+|++++|++++.|+.|++||. +++++..+.+|.. .|++++|+|++++|++++.|+.|++||...
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS-CEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC-CEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 9999999 8999999999999999999995 6888889999976 899999999999999999999999999754
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=9e-29 Score=180.93 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=126.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc---eeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc--ccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~ 75 (188)
++|+|++++|++++.|+.|++||+.++. ....+..|...|.+++|+|++++|++++.|+.|++||++.... ....
T Consensus 61 ~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 61 VDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp EEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence 4799999999999999999999999876 5566778999999999999999999999999999999986322 3444
Q ss_pred eeeccCCceeEE-eecCCCEEEEecCCCeEEEEecc------------------cCeeeeecccCCCcceeEEEeeCCCC
Q 029743 76 FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGIL------------------PNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
+...|...+.++ |+|++++|++++.|+.|++||++ .++++..+ .|.. .|.+++|+|+++
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~v~~~~~sp~~~ 218 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG-WVHAVGFSPSGN 218 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS-SEEEEEECTTSS
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc-eEEEEEECCCCC
Confidence 443267889999 89999999999999999999985 35566667 7755 899999999999
Q ss_pred EEEEEeCCCcEEEEeCCCccC
Q 029743 137 FLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+|++++.|+.|++||+++...
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTS
T ss_pred EEEEEeCCCcEEEEECCCCCC
Confidence 999999999999999998765
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=1.9e-27 Score=172.40 Aligned_cols=148 Identities=19% Similarity=0.257 Sum_probs=127.7
Q ss_pred ec-ccCeEEEEeCCCcEEEEEcCCC-------ceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce
Q 029743 4 AA-DAMKLLGTSGDGTLSVCNLRKN-------TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 4 s~-~~~~l~~~~~d~~i~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
++ ++++|++|+.|++|++|++..+ .+...+.+|...|.+++|+|++.++++++.|++|++||++. +..+..
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~-~~~~~~ 113 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT-GTTYKR 113 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS-SCEEEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-CcEEEE
Confidence 55 8999999999999999998743 34567789999999999999999999999999999999986 577788
Q ss_pred eeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeee--cccCCCcceeEEEeeCCC----------CEEEEEe
Q 029743 76 FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP--IAEHSEYPIESLALSHDR----------KFLGSIS 142 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~----------~~l~~~~ 142 (188)
+.+ |...+.++ |+|++++|++++.|+.|++||+........ ...|.. .|.+++|+|++ .+|++++
T Consensus 114 ~~~-h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 114 FVG-HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD-WVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEC-CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS-CEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EcC-CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc-eeeeeeeccccccccccCCCCCEEEEEc
Confidence 899 99999999 899999999999999999999974333221 225655 79999999987 7899999
Q ss_pred CCCcEEEEeCCC
Q 029743 143 HDSMLKLWDLDD 154 (188)
Q Consensus 143 ~d~~i~iwd~~~ 154 (188)
.|+.|++||...
T Consensus 192 ~d~~i~iwd~~~ 203 (343)
T 2xzm_R 192 WDGRLKVWNTNF 203 (343)
T ss_dssp TTSEEEEEETTT
T ss_pred CCCEEEEEcCCC
Confidence 999999999543
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=5.1e-28 Score=180.55 Aligned_cols=155 Identities=17% Similarity=0.225 Sum_probs=127.4
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCce--eeeecccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCccccccee
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTV--QTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
|+|+| ++++||+|+.||.|+|||+..++. ...+.+|...|++++|+| ++++|++++.|++|++||++. .....+
T Consensus 125 l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~--~~~~~~ 202 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG--NILRVF 202 (435)
T ss_dssp EEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS--CEEEEE
T ss_pred EEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC--CceeEE
Confidence 57999 577999999999999999987654 344568999999999998 689999999999999999974 333333
Q ss_pred eec--cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC-EEEEEeCCCcEEEEeC
Q 029743 77 VGL--SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDSMLKLWDL 152 (188)
Q Consensus 77 ~~~--~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~ 152 (188)
... +...+.++ ++|++++|++|+.||.|++||++ ++.+..+.+|.. .|.+++|+|+++ +|++++.|+.|++||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKK-KVTHVALNPCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSS-CEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccc-eEEeeeecCCCceEEEEecCcceeeEEec
Confidence 320 23346677 89999999999999999999986 566778888876 899999999886 6778999999999999
Q ss_pred CCccCCC
Q 029743 153 DDILKGS 159 (188)
Q Consensus 153 ~~~~~~~ 159 (188)
++.....
T Consensus 281 ~~~~~~~ 287 (435)
T 4e54_B 281 RQVRGKA 287 (435)
T ss_dssp TTCCSSS
T ss_pred ccccccc
Confidence 8765443
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=1.8e-27 Score=189.01 Aligned_cols=154 Identities=16% Similarity=0.246 Sum_probs=142.2
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.+|.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.|+.|++||+.+ +..+..+.+ |
T Consensus 19 i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~-~~~~~~~~~-~ 96 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT-GEKVVDFEA-H 96 (814)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEec-C
Confidence 57999999999999999999999999999999999999999999999999999999999999999986 577788888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccC-eeeeecccCCCcceeEEEeeC-CCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
...+.++ |+|+++++++++.||.|++|+++++ .....+.+|.. .|.+++|+| ++..|++++.|+.|++||+.+...
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~ 175 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP 175 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS-CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC-cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 9999999 8999999999999999999999987 67777888866 899999999 888999999999999999976554
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=5.3e-28 Score=173.56 Aligned_cols=152 Identities=18% Similarity=0.217 Sum_probs=128.8
Q ss_pred Ceeec--ccCeEEEEeCCCcEEEEEcCCC--ceeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeCCccc--c
Q 029743 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKN--TVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFKD--C 72 (188)
Q Consensus 1 l~~s~--~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~--~ 72 (188)
++|+| ++++|++++.|++|++||++++ .....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.... .
T Consensus 63 v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp EEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE
T ss_pred EEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce
Confidence 36765 4899999999999999999876 355667789999999999997 78999999999999999975322 2
Q ss_pred cceeeeccCCceeEE-eecC-----------------CCEEEEecCCCeEEEEecccC---eeeeecccCCCcceeEEEe
Q 029743 73 SDRFVGLSPNSVDAL-LKLD-----------------EDRVITGSENGLISLVGILPN---RIIQPIAEHSEYPIESLAL 131 (188)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~-----------------~~~l~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~~v~~~~~ 131 (188)
...+.+ |...+.++ |+|+ +++|++|+.|+.|++||++.. .++..+.+|.. .|.+++|
T Consensus 143 ~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~-~V~~v~~ 220 (316)
T 3bg1_A 143 KKINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD-WVRDVAW 220 (316)
T ss_dssp CCBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS-CEEEEEC
T ss_pred eeeecc-ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC-ceEEEEe
Confidence 344566 78888888 7876 478999999999999999754 46778888976 8999999
Q ss_pred eCCC----CEEEEEeCCCcEEEEeCCC
Q 029743 132 SHDR----KFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 132 ~~~~----~~l~~~~~d~~i~iwd~~~ 154 (188)
+|++ .+|++++.|++|++|++++
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 9986 7899999999999999976
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-28 Score=185.48 Aligned_cols=151 Identities=11% Similarity=0.056 Sum_probs=130.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc-eeeeecccccceEEE--EEEeCC-CEEEEecCCCeEEEEEeCCccccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSEFSEEELTSV--VLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
++|+|+ ..|++|+.||+|++||+.++. +...+.+|...|.++ +|+|++ ++|++++.|++|++||++. +.+...+
T Consensus 272 v~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~ 349 (524)
T 2j04_B 272 FDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTT 349 (524)
T ss_dssp EEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEE
T ss_pred EEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCccccc
Confidence 467775 489999999999999998763 445678999999999 567887 8999999999999999986 4666667
Q ss_pred eeccCC--ceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 77 VGLSPN--SVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 77 ~~~~~~--~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
.+ |.. .+.++ |+|+++.+++++.|+.|++||++++.++..+.+|.+ .|++++|+|++++|++|+.|++|++||+.
T Consensus 350 ~~-~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~-~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 350 VS-RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET-TITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EE-ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS-CEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred cc-ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCC-ceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 66 543 46777 899999999999999999999999988888888976 89999999999999999999999999987
Q ss_pred Cc
Q 029743 154 DI 155 (188)
Q Consensus 154 ~~ 155 (188)
..
T Consensus 428 ~~ 429 (524)
T 2j04_B 428 RR 429 (524)
T ss_dssp SS
T ss_pred Hh
Confidence 54
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-27 Score=175.25 Aligned_cols=157 Identities=10% Similarity=0.176 Sum_probs=141.3
Q ss_pred Ceeecc-cCeEEEEeCCCcEEEEEcCCCceeeeeccc------ccceEEEEEEeCC-CEEEEecCCC---eEEEEEeCCc
Q 029743 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRSEFS------EEELTSVVLMKNG-RKVVCGSQSG---TVLLYSWGYF 69 (188)
Q Consensus 1 l~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~~~d~~~~ 69 (188)
++|+|+ +++|++++.|+.|++||+.+++.+..+..+ ...+.+++|+|++ .++++++.++ .|++||++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 478998 789999999999999999999888887765 7889999999987 6899999998 9999999875
Q ss_pred ccccceee-eccCCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCC-CEEEEEeCCC
Q 029743 70 KDCSDRFV-GLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR-KFLGSISHDS 145 (188)
Q Consensus 70 ~~~~~~~~-~~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~ 145 (188)
...+..+. + |...+.++ |+| ++++|++++.|+.|++||+++++++..+..|.. .|.+++|+|++ .+|++++.|+
T Consensus 251 ~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 251 NTPLQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN-WCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp TSCSBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS-CCCCEEECTTCTTEEEECCSSS
T ss_pred CCCcEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC-ceEEEEECCCCCCEEEEEecCC
Confidence 56777787 8 89999999 899 999999999999999999999999999999866 89999999999 8999999999
Q ss_pred cEEEEeCCCccCCC
Q 029743 146 MLKLWDLDDILKGS 159 (188)
Q Consensus 146 ~i~iwd~~~~~~~~ 159 (188)
.|++|++.+.....
T Consensus 329 ~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 329 KIEVQTLQNLTNTL 342 (416)
T ss_dssp EEEEEESCCCCCSS
T ss_pred cEEEEEccCCCCCc
Confidence 99999999876543
No 51
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=192.21 Aligned_cols=149 Identities=11% Similarity=0.119 Sum_probs=127.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCcee--eee----c-----ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ--TRS----E-----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~----~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 69 (188)
++|+|++++|++|+.|++|++||+.++... ..+ . +|...|.+++|+|++++|++|+.|++|++|++...
T Consensus 441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 468999999999999999999999877431 111 1 78889999999999999999999999999999643
Q ss_pred c--------------------------------------------cccceeeeccCCceeEE-eecCCCEEEEecCCCeE
Q 029743 70 K--------------------------------------------DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLI 104 (188)
Q Consensus 70 ~--------------------------------------------~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v 104 (188)
. +++..+.+ |...|+++ |+|+| +|++|+.|++|
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h~~~V~svafSpdG-~lAsgs~D~tv 598 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-NKGKTSAINNSNIG-FVGIAYAAGSL 598 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-CSCSEEEEEECBTS-EEEEEETTSEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEc-CCCcEEEEEecCCc-EEEEEeCCCcE
Confidence 1 13556778 99999999 89999 99999999999
Q ss_pred EEEecccCeeee-----ecc-cCCCcceeEEEee-----CCC---CEEEEEeCCCcEEEEeC
Q 029743 105 SLVGILPNRIIQ-----PIA-EHSEYPIESLALS-----HDR---KFLGSISHDSMLKLWDL 152 (188)
Q Consensus 105 ~~~d~~~~~~~~-----~~~-~~~~~~v~~~~~~-----~~~---~~l~~~~~d~~i~iwd~ 152 (188)
+|||+++...+. .+. +|.. .|++++|+ ||| ++|++++.|++|++||+
T Consensus 599 ~lwd~~~~~~~~~~~~~~~~~gh~~-~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 599 MLIDRRGPAIIYMENIREISGAQSA-CVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEETTTTEEEEEEEGGGTCSSCCC-CEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEECCCCeEEEEeehhHhcccccc-ceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 999998776543 343 7766 79999999 885 89999999999999998
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2.7e-27 Score=195.46 Aligned_cols=153 Identities=17% Similarity=0.249 Sum_probs=143.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+ +..+..+.+ |
T Consensus 621 ~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~-~ 698 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT-GKLVHTYDE-H 698 (1249)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEEC-C
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC-CceEEEEcC-C
Confidence 47999999999999999999999999999999999999999999999999999999999999999986 578888889 9
Q ss_pred CCceeEE-eec--CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 81 PNSVDAL-LKL--DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 81 ~~~v~~~-~~~--~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
...+.++ |+| ++.++++++.|+.|++||+++++++..+.+|.. .|.+++|+|++++|++++.|+.|++||+.+..
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~-~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN-SVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS-CEEEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC-CEEEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 9999999 888 566899999999999999999999999999976 89999999999999999999999999998764
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.3e-27 Score=178.41 Aligned_cols=152 Identities=16% Similarity=0.181 Sum_probs=128.5
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceee
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 77 (188)
|+|+| ++++|++++.|++|++||++.+....... .+...+.+++|+|++++|++|+.|+.|++||++ +..+..+.
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~--~~~~~~~~ 247 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD--GKELWNLR 247 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS--SCBCCCSB
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC--cceeEEEe
Confidence 47998 68999999999999999998765433333 334467899999999999999999999999986 46677788
Q ss_pred eccCCceeEE-eecCCC-EEEEecCCCeEEEEecccCeeeee---cccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 78 GLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
+ |...|.++ |+|++. ++++++.|+.|++||+++.+.... ..+|.. .|++++|+|++++|++++.|+.|++||+
T Consensus 248 ~-h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~spdg~~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 248 M-HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH-PVNAACFSPDGARLLTTDQKSEIRVYSA 325 (435)
T ss_dssp C-CSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS-CEEECCBCTTSSEEEEEESSSCEEEEES
T ss_pred c-ccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc-cccceeECCCCCeeEEEcCCCEEEEEEC
Confidence 8 99999999 899876 678899999999999987664433 356755 8999999999999999999999999999
Q ss_pred CCcc
Q 029743 153 DDIL 156 (188)
Q Consensus 153 ~~~~ 156 (188)
.+..
T Consensus 326 ~~~~ 329 (435)
T 4e54_B 326 SQWD 329 (435)
T ss_dssp SSSS
T ss_pred CCCc
Confidence 8754
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=5.5e-27 Score=168.49 Aligned_cols=155 Identities=14% Similarity=0.259 Sum_probs=134.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCcee---eeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc-ccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ---TRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSD 74 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~ 74 (188)
++|+|++++|++++ |+.|++|++..+... ..+. .|...|.+++|+|++++|++++.|+.|++||+..... ...
T Consensus 57 ~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceee
Confidence 47999999999998 999999999876432 2222 6889999999999999999999999999999976321 445
Q ss_pred eeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
.+.. |...+.++ ++|+++++++++.++.|++||+++++.+..+..|.. .|.+++|+|++++|++++.|+.|++||++
T Consensus 136 ~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 136 ELTS-SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp EEEC-SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eccc-CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 5667 88889999 899999999999999999999999999999988866 89999999999999999999999999998
Q ss_pred CccCC
Q 029743 154 DILKG 158 (188)
Q Consensus 154 ~~~~~ 158 (188)
+....
T Consensus 214 ~~~~~ 218 (337)
T 1gxr_A 214 EGRQL 218 (337)
T ss_dssp TTEEE
T ss_pred CCceE
Confidence 76543
No 55
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=3.6e-27 Score=173.33 Aligned_cols=152 Identities=12% Similarity=0.142 Sum_probs=134.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecc---c---ccceEEEEEEeCCCEEEEecCC---CeEEEEEeCCccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF---S---EEELTSVVLMKNGRKVVCGSQS---GTVLLYSWGYFKD 71 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~ 71 (188)
++|+|++ +|++++.|+.|++||+.+++.+..+.. | ...|.+++|+|++++|++++.| +.|++||++. +.
T Consensus 192 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~ 269 (397)
T 1sq9_A 192 VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GE 269 (397)
T ss_dssp EEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CC
T ss_pred EEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-Cc
Confidence 4789999 999999999999999999999888888 8 9999999999999999999999 9999999976 45
Q ss_pred ccceeeec------------cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecc------cC-----------
Q 029743 72 CSDRFVGL------------SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA------EH----------- 121 (188)
Q Consensus 72 ~~~~~~~~------------~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~------~~----------- 121 (188)
.+..+... |...+.++ |+|++++|++++.|+.|++||+++++++..+. .|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 349 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccc
Confidence 55555431 56788899 89999999999999999999999999998888 66
Q ss_pred ----CCcceeEEEeeCCC----------CEEEEEeCCCcEEEEeCCCc
Q 029743 122 ----SEYPIESLALSHDR----------KFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 122 ----~~~~v~~~~~~~~~----------~~l~~~~~d~~i~iwd~~~~ 155 (188)
.. .|.+++|+|++ ++|++++.|+.|++|+++++
T Consensus 350 ~~~~~~-~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 350 DSLAEP-GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CBCSSC-CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccCC-ceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 55 89999999998 79999999999999999765
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=6.4e-27 Score=171.61 Aligned_cols=151 Identities=15% Similarity=0.228 Sum_probs=132.3
Q ss_pred Ceeeccc-CeEEEEeCCCcEEEEEcCCCceeeeec--ccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCccccccee
Q 029743 1 MTFAADA-MKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
++|+|++ ++|++|+.|+.|++||+.+++....+. +|...|.+++|+| ++++|++++.|+.|++||+.. ..+..+
T Consensus 79 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~~~~ 156 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG--SVIQVF 156 (383)
T ss_dssp EEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS--CEEEEE
T ss_pred EEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC--CceEEE
Confidence 4799998 999999999999999999887766655 6999999999999 789999999999999999974 445555
Q ss_pred eec--cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC-EEEEEeCCCcEEEEeC
Q 029743 77 VGL--SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDSMLKLWDL 152 (188)
Q Consensus 77 ~~~--~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~ 152 (188)
... +...+.++ |+|+++++++++.|+.|++||+ .++++..+..|.. .|.+++|+|+++ +|++++.|+.|++||+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA-KVTHAEFNPRCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS-CEEEEEECSSCTTEEEEEETTSEEEEEEG
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC-cEEEEEECCCCCCEEEEEeCCCEEEEEeC
Confidence 440 33678999 8999999999999999999999 5778888888866 899999999999 8999999999999999
Q ss_pred CCc
Q 029743 153 DDI 155 (188)
Q Consensus 153 ~~~ 155 (188)
++.
T Consensus 235 ~~~ 237 (383)
T 3ei3_B 235 RNI 237 (383)
T ss_dssp GGC
T ss_pred CCC
Confidence 874
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3e-27 Score=172.35 Aligned_cols=154 Identities=16% Similarity=0.164 Sum_probs=134.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcC--CCceeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeCCcc-cccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~-~~~~~ 75 (188)
++|+|++++|++++.|+.|++|++. +++.+..+.+|...|.+++|+++ +++|++++.|+.|++||+.... ..+..
T Consensus 17 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 96 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 96 (379)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee
Confidence 4799999999999999999999998 45667788899999999999987 8999999999999999998632 25666
Q ss_pred eeeccCCceeEE-eecC--CCEEEEecCCCeEEEEecccCe--eeeecccCCCcceeEEEeeC-------------CCCE
Q 029743 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSH-------------DRKF 137 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~-------------~~~~ 137 (188)
+.. |...+.++ |+|+ +.++++++.|+.|++||++++. ....+..|.. .|.+++|+| ++.+
T Consensus 97 ~~~-~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 97 HAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-CEEEEEECCCC----------CTTCE
T ss_pred ecC-CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-ceEEEEEcCccccccccccCCCCCCE
Confidence 777 88999999 8998 9999999999999999998773 3445567755 899999999 6999
Q ss_pred EEEEeCCCcEEEEeCCCcc
Q 029743 138 LGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~ 156 (188)
|++++.|+.|++||+++..
T Consensus 175 l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 175 FVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp EEEEETTSCEEEEEEETTT
T ss_pred EEEEeCCCeEEEEEecCCC
Confidence 9999999999999997653
No 58
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-26 Score=168.55 Aligned_cols=155 Identities=16% Similarity=0.164 Sum_probs=133.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceee---
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV--- 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--- 77 (188)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+... ..+..+.
T Consensus 38 ~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~ 116 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG-QCVATWKSPV 116 (369)
T ss_dssp EEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-CEEEEEECSS
T ss_pred EEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-cEEEEeecCC
Confidence 579999999999999999999999999999999999999999999999999999999999999998752 2222111
Q ss_pred ------------------------------------------------------eccCC--ceeEE-eecCCCEEEEecC
Q 029743 78 ------------------------------------------------------GLSPN--SVDAL-LKLDEDRVITGSE 100 (188)
Q Consensus 78 ------------------------------------------------------~~~~~--~v~~~-~~~~~~~l~~~~~ 100 (188)
. +.. .+.++ ++|+++++++++.
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 195 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT-HEGLDAATVAGWSTKGKYIIAGHK 195 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC-CTTCCCEEEEEECGGGCEEEEEET
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC-CcCccceeEEEEcCCCCEEEEEcC
Confidence 1 111 56666 7888899999999
Q ss_pred CCeEEEEeccc-CeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 101 NGLISLVGILP-NRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 101 d~~v~~~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
+|.|++||+++ +..+..+..|.. .|.+++|+|++++|++++.|+.|++||+++....
T Consensus 196 dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 196 DGKISKYDVSNNYEYVDSIDLHEK-SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp TSEEEEEETTTTTEEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCcEeEEEEecCCC-ceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 99999999998 788888888866 8999999999999999999999999999886543
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-27 Score=174.07 Aligned_cols=150 Identities=15% Similarity=0.102 Sum_probs=138.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++||+..++.+..+..|...|.+++|+|++ .+++++.|+.|++||++. +..+..+.. |
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~-~ 329 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIV-D 329 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEEC-T
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEeccc-C
Confidence 4789999999999999999999999998888888899999999999999 999999999999999976 567777888 8
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCe--------------------eeeecccCCCc-ceeEEEeeCCCCEE
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNR--------------------IIQPIAEHSEY-PIESLALSHDRKFL 138 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~--------------------~~~~~~~~~~~-~v~~~~~~~~~~~l 138 (188)
...+.++ |+|++++|++++.+|.|++||++++. ++..+..|... .|.+++|+|++++|
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 409 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI 409 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEE
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceE
Confidence 8999999 89999999999999999999999888 78888888543 79999999999999
Q ss_pred EEEeCCCcEEEEeCC
Q 029743 139 GSISHDSMLKLWDLD 153 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~ 153 (188)
++++.|+.|++|+++
T Consensus 410 ~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 410 SVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEESSSCCEEEECC
T ss_pred EEEecCceEEEEeec
Confidence 999999999999986
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1.2e-26 Score=166.79 Aligned_cols=153 Identities=14% Similarity=0.195 Sum_probs=137.4
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|++++|++++.|+.|++|++.+++ ....+..|...+.+++|+|+++++++++.++.|++||++. +..+..+..
T Consensus 103 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~ 181 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQG 181 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-Cceeeeeec
Confidence 4789999999999999999999999876 5566778999999999999999999999999999999986 567777888
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
|...+.++ ++|+++++++++.++.|++||+++++.+..+... . .+.+++|+|++++|++++.++.|++||+++...
T Consensus 182 -~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 182 -HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT-S-QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp -CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS-S-CEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred -ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC-C-ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 89999999 8999999999999999999999999888777543 4 799999999999999999999999999987654
No 61
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-27 Score=175.94 Aligned_cols=155 Identities=15% Similarity=0.210 Sum_probs=135.8
Q ss_pred CeeecccCeE-EEEeCCCcEEEEEcC--CCceeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc---c
Q 029743 1 MTFAADAMKL-LGTSGDGTLSVCNLR--KNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD---C 72 (188)
Q Consensus 1 l~~s~~~~~l-~~~~~d~~i~i~~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~ 72 (188)
++|+|++++| ++++.|+.|++|++. +++.+..+. .|...|.+++|+|++++|++++.++.+++|++..... .
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 4799999996 888899999999999 787777776 5678899999999999999999999999999975321 2
Q ss_pred cceeeeccCCceeEE-eecC---CCEEEEecCCCeEEEEecccCeeeee-cccCCCcceeEEEeeCCCCEEEEEeCCCcE
Q 029743 73 SDRFVGLSPNSVDAL-LKLD---EDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSML 147 (188)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~---~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 147 (188)
...+.+ |...+.++ |+|+ +++|++++.|+.|++||+++++.+.. +.+|.. .|.+++|+ ++++|++++.|+.|
T Consensus 188 ~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~s-d~~~l~s~~~d~~v 264 (450)
T 2vdu_B 188 QEPILG-HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH-FVSSICCG-KDYLLLSAGGDDKI 264 (450)
T ss_dssp CCCSEE-CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS-CEEEEEEC-STTEEEEEESSSEE
T ss_pred ceeeec-ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC-ceEEEEEC-CCCEEEEEeCCCeE
Confidence 336778 99999999 8999 99999999999999999999888777 557765 89999999 99999999999999
Q ss_pred EEEeCCCccCC
Q 029743 148 KLWDLDDILKG 158 (188)
Q Consensus 148 ~iwd~~~~~~~ 158 (188)
++||+++....
T Consensus 265 ~vwd~~~~~~~ 275 (450)
T 2vdu_B 265 FAWDWKTGKNL 275 (450)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcEe
Confidence 99999987643
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=5.2e-27 Score=174.90 Aligned_cols=154 Identities=12% Similarity=0.159 Sum_probs=128.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc-----------eeeeecccc------------cceEEEEEEeCC--CEEEEe
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-----------VQTRSEFSE------------EELTSVVLMKNG--RKVVCG 55 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~--~~l~~~ 55 (188)
++|+|+|++|++|+.|+.|+||++.+++ ....+.+|. ..|.+++|+|++ ..|+++
T Consensus 34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 5799999999999999999999998776 467788898 889999999998 799999
Q ss_pred cCCCeEEEEEeCCcccc--------------------------------------cce-eeeccCCceeEE-eecCCCEE
Q 029743 56 SQSGTVLLYSWGYFKDC--------------------------------------SDR-FVGLSPNSVDAL-LKLDEDRV 95 (188)
Q Consensus 56 ~~d~~i~~~d~~~~~~~--------------------------------------~~~-~~~~~~~~v~~~-~~~~~~~l 95 (188)
+.|+.|++|++...... ... ..+ |...|.++ |+|++++|
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l 192 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA-HTYHINSISINSDYETY 192 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC-CSSCCCEEEECTTSSEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC-CCcceEEEEEcCCCCEE
Confidence 99999999998642110 112 356 88899999 89999999
Q ss_pred EEecCCCeEEEEeccc-Ceeee-------ecccCCCcceeEEEeeCCC-CEEEEEeCCCcEEEEeCCCccC
Q 029743 96 ITGSENGLISLVGILP-NRIIQ-------PIAEHSEYPIESLALSHDR-KFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 96 ~~~~~d~~v~~~d~~~-~~~~~-------~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+++ .|+.|++||+++ +..+. .+.+|.. .|.+++|+|++ .+|++++.|+.|++||+++...
T Consensus 193 ~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 193 LSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE-VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC-CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEe-CCCeEEEEECCCCCceeeeeecccccccccCc-ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 999 799999999984 44443 3567765 89999999998 8999999999999999998764
No 63
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.2e-26 Score=171.36 Aligned_cols=155 Identities=13% Similarity=0.173 Sum_probs=138.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++| +++.|++++.|+.|++||++........+.+ |
T Consensus 140 v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~ 216 (401)
T 4aez_A 140 VKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-H 216 (401)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-C
T ss_pred EEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC-C
Confidence 479999999999999999999999999999999999999999999 5679999999999999999865677788888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCE-EEEEe--CCCcEEEEeCCCcc
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF-LGSIS--HDSMLKLWDLDDIL 156 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~--~d~~i~iwd~~~~~ 156 (188)
...+.++ |+|+++++++++.|+.|++||+++++++..+..|.. .|.+++|+|++.. +++++ .|+.|++||+.+..
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA-AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS-CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc-eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 9999999 899999999999999999999999999988888866 8999999997754 45544 69999999998776
Q ss_pred CCC
Q 029743 157 KGS 159 (188)
Q Consensus 157 ~~~ 159 (188)
...
T Consensus 296 ~~~ 298 (401)
T 4aez_A 296 RVN 298 (401)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 64
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=2.6e-26 Score=163.98 Aligned_cols=153 Identities=14% Similarity=0.214 Sum_probs=122.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeee-----------------------------------------cccccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRS-----------------------------------------EFSEEE 39 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-----------------------------------------~~~~~~ 39 (188)
++|+|++++|++|+.|++|++|++++++.+..+ .+|...
T Consensus 73 v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 152 (318)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc
Confidence 479999999999999999999999887654433 345566
Q ss_pred eEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc---ccee----------------------------------------
Q 029743 40 LTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC---SDRF---------------------------------------- 76 (188)
Q Consensus 40 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~---------------------------------------- 76 (188)
+..+.+.+++++|++++.|+.|++||+...... ....
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc
Confidence 778888888999999999999999998642110 0000
Q ss_pred ----eeccCCceeEE-eecCCCEEEEe--cCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 77 ----VGLSPNSVDAL-LKLDEDRVITG--SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 77 ----~~~~~~~v~~~-~~~~~~~l~~~--~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
.. +...+..+ ++|++..++++ +.|+.|++||+++++++..+.+|.+ .|++++|+|++++|++++.|++|+|
T Consensus 233 ~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~-~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 233 CLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS-RVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTEEEE
T ss_pred cccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCeEEE
Confidence 01 22334555 67888777654 4789999999999999999999976 8999999999999999999999999
Q ss_pred EeCCCc
Q 029743 150 WDLDDI 155 (188)
Q Consensus 150 wd~~~~ 155 (188)
||+...
T Consensus 311 Wd~~~~ 316 (318)
T 4ggc_A 311 WRCFEL 316 (318)
T ss_dssp ECCSCC
T ss_pred EECCCC
Confidence 999764
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=1.1e-26 Score=169.14 Aligned_cols=151 Identities=10% Similarity=0.073 Sum_probs=131.2
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc--ccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--SDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~ 76 (188)
++|+|++++|++++.++.|++|++.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+... .. ...+
T Consensus 14 ~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 92 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR-TWKPTLVI 92 (372)
T ss_dssp EEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT-EEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC-eeeeeEEe
Confidence 4799999999999999999999999887 77888899999999999999999999999999999999753 32 2233
Q ss_pred eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCee---eee-cccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI---IQP-IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~---~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
.. |...+.++ |+|+++++++++.++.|++||++.+.. ... ...|.. .|.+++|+|++++|++++.|+.|++||
T Consensus 93 ~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 93 LR-INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ec-CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-CeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 55 78889999 899999999999999999999988762 223 355555 899999999999999999999999999
Q ss_pred CCC
Q 029743 152 LDD 154 (188)
Q Consensus 152 ~~~ 154 (188)
++.
T Consensus 171 ~~~ 173 (372)
T 1k8k_C 171 AYI 173 (372)
T ss_dssp CCC
T ss_pred ccc
Confidence 864
No 66
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=1.9e-26 Score=169.04 Aligned_cols=152 Identities=16% Similarity=0.151 Sum_probs=132.4
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeeec---ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccccee
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE---FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
++|+| ++++|++++.|+.|++||+.. ..+..+. .|...|.+++|+|++++|++++.|+.|++||++ +..+..+
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~ 200 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKE 200 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEE
T ss_pred EEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEe
Confidence 47899 789999999999999999986 4444444 344789999999999999999999999999994 5777888
Q ss_pred eeccCCceeEE-eecCCC-EEEEecCCCeEEEEeccc----CeeeeecccCCCcceeEEEeeC-CCCEEEEEeCCCcEEE
Q 029743 77 VGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILP----NRIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKL 149 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i 149 (188)
.. |...+.++ |+|+++ ++++++.|+.|++||+++ +.++..+ .|.. .|.+++|+| ++++|++++.|+.|++
T Consensus 201 ~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~-~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 201 KL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK-PVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp EC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS-CEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred cc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC-ceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 88 99999999 899999 999999999999999998 5566656 5655 899999999 9999999999999999
Q ss_pred EeCCCccCC
Q 029743 150 WDLDDILKG 158 (188)
Q Consensus 150 wd~~~~~~~ 158 (188)
||+++....
T Consensus 278 wd~~~~~~~ 286 (383)
T 3ei3_B 278 YSSYDWSKP 286 (383)
T ss_dssp EETTBTTSC
T ss_pred EECCCCccc
Confidence 999886653
No 67
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.4e-26 Score=168.10 Aligned_cols=157 Identities=10% Similarity=0.161 Sum_probs=140.4
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC-CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeec
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (188)
++|+|++++|++++.++.|++||+.+ +..+..+..|...|.+++|+|++++|++++.|+.|++||++. +..+..+.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-- 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST-LQVLKKYE-- 257 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEE--
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC-Cceeeeec--
Confidence 46899999999999999999999998 788888889999999999999999999999999999999986 45555555
Q ss_pred cCCceeEE-eecCCCEEEEecCCC--------------eEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCC
Q 029743 80 SPNSVDAL-LKLDEDRVITGSENG--------------LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~d~--------------~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 144 (188)
+...+.++ ++|+++++++++.++ .+++||+.+++++..+.+|.. .|.+++|+|++++|++++.|
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG-PLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSSEEEEEETT
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC-cEEEEEECCCCCEEEEEcCC
Confidence 56678888 899999999999888 899999999999999999966 89999999999999999999
Q ss_pred CcEEEEeCCCccCCCCC
Q 029743 145 SMLKLWDLDDILKGSGN 161 (188)
Q Consensus 145 ~~i~iwd~~~~~~~~~~ 161 (188)
+.|++|++++.......
T Consensus 337 g~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 337 GFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp SEEEEEEECHHHHTCCC
T ss_pred CeEEEEECccccchhHH
Confidence 99999999987654443
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=168.32 Aligned_cols=151 Identities=15% Similarity=0.202 Sum_probs=129.9
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEe---CCCEEEEecCCCeEEEEEeCCcccccceee-
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~- 77 (188)
+|+|++++|++++.|+.|++||+++++.... ..|...|.+++|+| +++.|++++.|+.|++||++. +.....+.
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~ 252 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT-QHPTKGFAS 252 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE-EETTTEEEE
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC-CCcccceee
Confidence 4789999999999999999999999887544 56889999999999 899999999999999999976 45555554
Q ss_pred ----eccCCceeEE-eecCCC-EEEEecCCCeEEEEecccC-------------------eeeeecccCCCcceeEEEee
Q 029743 78 ----GLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPN-------------------RIIQPIAEHSEYPIESLALS 132 (188)
Q Consensus 78 ----~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~~-------------------~~~~~~~~~~~~~v~~~~~~ 132 (188)
+ |...+.++ |+|+++ ++++++.||.|++||++.+ +++..+.+|.. .|.+++|+
T Consensus 253 ~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~v~~~~~s 330 (357)
T 3i2n_A 253 VSEKA-HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ-PISSLDWS 330 (357)
T ss_dssp EEEEC-CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS-CEEEEEEC
T ss_pred eccCC-CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC-CeeEEEEc
Confidence 7 89999999 899998 8999999999999999854 35667778866 89999999
Q ss_pred CCCCEEE-EEeCCCcEEEEeCCCcc
Q 029743 133 HDRKFLG-SISHDSMLKLWDLDDIL 156 (188)
Q Consensus 133 ~~~~~l~-~~~~d~~i~iwd~~~~~ 156 (188)
|++++|+ +++.|+.|++||+.+..
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999998 79999999999998754
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=8.1e-27 Score=172.27 Aligned_cols=155 Identities=14% Similarity=0.153 Sum_probs=132.8
Q ss_pred eeecccCeEE-EEeCCCcEEEEEcCCC----ceeeeecccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCcc-----
Q 029743 2 TFAADAMKLL-GTSGDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFK----- 70 (188)
Q Consensus 2 ~~s~~~~~l~-~~~~d~~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~----- 70 (188)
+++|+...++ +++.+|.|+||++... .....+.+|...|.+++|+| ++++|++++.|+.|++|++...+
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc
Confidence 4566654443 4688999999998654 23445678999999999999 89999999999999999997642
Q ss_pred -cccceeeeccCCceeEE-eecCC-CEEEEecCCCeEEEEecccCeeeeec--ccCCCcceeEEEeeCCCCEEEEEeCCC
Q 029743 71 -DCSDRFVGLSPNSVDAL-LKLDE-DRVITGSENGLISLVGILPNRIIQPI--AEHSEYPIESLALSHDRKFLGSISHDS 145 (188)
Q Consensus 71 -~~~~~~~~~~~~~v~~~-~~~~~-~~l~~~~~d~~v~~~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~ 145 (188)
..+..+.+ |...+.++ |+|++ .+|++++.|+.|++||+++++.+..+ ..|.. .|.+++|+|++++|++++.|+
T Consensus 121 ~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 121 REPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-TIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp CSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS-CEEEEEECTTSSCEEEEETTS
T ss_pred CCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC-ceEEEEECCCCCEEEEEecCC
Confidence 56777888 99999999 89998 69999999999999999999999888 77866 899999999999999999999
Q ss_pred cEEEEeCCCccCC
Q 029743 146 MLKLWDLDDILKG 158 (188)
Q Consensus 146 ~i~iwd~~~~~~~ 158 (188)
.|++||+++....
T Consensus 199 ~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 199 RVRVIEPRKGTVV 211 (402)
T ss_dssp EEEEEETTTTEEE
T ss_pred cEEEEeCCCCcee
Confidence 9999999876543
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-27 Score=178.74 Aligned_cols=155 Identities=12% Similarity=0.025 Sum_probs=129.9
Q ss_pred Ceeecc------cCeEEEEeCCCcEEEEEcCCCce-----------eeeecccccceEEEEEEeCCCEEEEecCCCeEEE
Q 029743 1 MTFAAD------AMKLLGTSGDGTLSVCNLRKNTV-----------QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 1 l~~s~~------~~~l~~~~~d~~i~i~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
|+|+|+ +++||+++.|++|++||+..+.. ...+.+|...|.+++|+++ ..|++|+.||+|++
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~l 291 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAE 291 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEE
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEE
Confidence 467875 67999999999999999986532 2356789999999999985 58999999999999
Q ss_pred EEeCCcccccceeeeccCCceeEE--e-ecCC-CEEEEecCCCeEEEEecccCeeeeecccCCC-cceeEEEeeCCCCEE
Q 029743 64 YSWGYFKDCSDRFVGLSPNSVDAL--L-KLDE-DRVITGSENGLISLVGILPNRIIQPIAEHSE-YPIESLALSHDRKFL 138 (188)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~~~v~~~--~-~~~~-~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l 138 (188)
||++....+...+.+ |...|.++ + +|+| .+|++++.|++|+|||++++++...+.+|.. ..|.+++|+|+++.+
T Consensus 292 WD~~~~~~~~~~~~~-H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 292 FDLTDPEVPSFYDQV-HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EETTBCSSCSEEEEC-SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EECCCCCCceEEeec-ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 999864445566888 99999998 3 6777 8999999999999999999887777766642 247899999999999
Q ss_pred EEEeCCCcEEEEeCCCccC
Q 029743 139 GSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~ 157 (188)
++++.|++|++||+++...
T Consensus 371 ~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEECSSSEEEEEETTCTTC
T ss_pred EEeCCCCcEEEEECccccc
Confidence 9999999999999987654
No 71
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.1e-26 Score=173.13 Aligned_cols=156 Identities=12% Similarity=0.216 Sum_probs=135.9
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCC---ceeeeecccccceEEEEEEeCCC-EEEEecCCCeEEEEEeCCcccccce
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKN---TVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
++|+| ++.+|++++.|+.|++||++.+ ..+..+..|...|.+++|+|++. .+++++.|+.|++||++..+.++..
T Consensus 237 v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 237 VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred eEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 46889 6788999999999999999876 56667778999999999999887 6889999999999999876677888
Q ss_pred eeeccCCceeEE-eecCCC-EEEEecCCCeEEEEeccc--------------CeeeeecccCCCcceeEEEeeCCCC-EE
Q 029743 76 FVGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILP--------------NRIIQPIAEHSEYPIESLALSHDRK-FL 138 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~-~l 138 (188)
+.. |...+.++ |+|+++ ++++++.|+.|++||+.. ...+..+.+|.. .|++++|+|+++ +|
T Consensus 317 ~~~-h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~l 394 (430)
T 2xyi_A 317 FES-HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-KISDFSWNPNEPWII 394 (430)
T ss_dssp EEC-CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS-CEEEEEECSSSTTEE
T ss_pred eec-CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC-CceEEEECCCCCCEE
Confidence 888 99999999 899985 689999999999999987 256667777865 799999999999 88
Q ss_pred EEEeCCCcEEEEeCCCccCC
Q 029743 139 GSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~~ 158 (188)
++++.|+.|++|++......
T Consensus 395 ~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 395 CSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EEEETTSEEEEEEECHHHHC
T ss_pred EEEECCCCEEEeEccccccc
Confidence 99999999999999876543
No 72
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-26 Score=168.13 Aligned_cols=153 Identities=12% Similarity=0.099 Sum_probs=124.7
Q ss_pred Ceeec--ccCeEEEEeCCCcEEEEEcCCCceeeeec-ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccc-cee
Q 029743 1 MTFAA--DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS-DRF 76 (188)
Q Consensus 1 l~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~ 76 (188)
++|+| +++++++++.|+.|++||+.+++...... .+...+.+++|+|++.+|++|+.|+.|++||++.. ... ..+
T Consensus 131 ~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~-~~~~~~~ 209 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP-DQASSRF 209 (343)
T ss_dssp EECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT-TSCCEEC
T ss_pred EEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-CCCccEE
Confidence 46889 99999999999999999999988866654 45568999999999999999999999999999874 443 444
Q ss_pred eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeeccc---CCCccee--EEEeeCCCCEEEEEeC-CCcEEE
Q 029743 77 VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE---HSEYPIE--SLALSHDRKFLGSISH-DSMLKL 149 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~~v~--~~~~~~~~~~l~~~~~-d~~i~i 149 (188)
...|..+|.++ |+|++.+|++++. +.|++||+++++....+.. +.. .+. +++|+|++++|++++. |+.|++
T Consensus 210 ~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 210 PVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEF-KTGTVTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp CCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccc-cccceEEEECCCCCEEEEecCCCCcEEE
Confidence 43278899999 8999999999994 4999999999877665543 322 344 5999999999999988 999999
Q ss_pred EeCCCcc
Q 029743 150 WDLDDIL 156 (188)
Q Consensus 150 wd~~~~~ 156 (188)
|++.+..
T Consensus 288 ~~~~~~~ 294 (343)
T 3lrv_A 288 YKFDKKT 294 (343)
T ss_dssp EEECTTT
T ss_pred EEEcccc
Confidence 9986553
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=2e-26 Score=167.79 Aligned_cols=155 Identities=16% Similarity=0.145 Sum_probs=133.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeee--ecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc--cccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR--SEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~~ 76 (188)
++|+|++++|++++.|+.|++||+.+++.... +..|...|.+++|+|++++|++++.|+.|++||++.... ....+
T Consensus 58 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 58 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 47999999999999999999999988865433 357889999999999999999999999999999976321 12223
Q ss_pred -eeccCCceeEE-eecCCCEEEEecCCCeEEEEecc------------------cCeeeeecccCCCcceeEEEeeCCCC
Q 029743 77 -VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGIL------------------PNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 77 -~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
.. |...+.++ |+|+++++++++.|+.|++||++ .++++..+..|.. .|.+++|+|+++
T Consensus 138 ~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 215 (372)
T 1k8k_C 138 KKP-IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG-WVHGVCFSANGS 215 (372)
T ss_dssp CTT-CCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS-CEEEEEECSSSS
T ss_pred ecc-cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC-eEEEEEECCCCC
Confidence 45 78889999 89999999999999999999953 6778888888866 899999999999
Q ss_pred EEEEEeCCCcEEEEeCCCccC
Q 029743 137 FLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+|++++.|+.|++||+++...
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTTE
T ss_pred EEEEEeCCCEEEEEECCCCce
Confidence 999999999999999987654
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=2.6e-26 Score=165.40 Aligned_cols=150 Identities=16% Similarity=0.205 Sum_probs=125.4
Q ss_pred eeecc--cCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeec
Q 029743 2 TFAAD--AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (188)
Q Consensus 2 ~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (188)
+|+++ ..++++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++. ...+..+.
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~-- 254 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE-GKHLYTLD-- 254 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT-TEEEEEEE--
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc-Cceeeeec--
Confidence 45554 45678999999999999999999999999999999999999999999999999999999986 46666665
Q ss_pred cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecc---------cCCCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA---------EHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
+...+.++ ++|++. +++++.|+.|++||++++..+..+. +|.. .|.+++|+|++++|++++.||.|+|
T Consensus 255 ~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~Dg~v~i 332 (340)
T 4aow_A 255 GGDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-QCTSLAWSADGQTLFAGYTDNLVRV 332 (340)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCC-CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCC-CEEEEEECCCCCEEEEEeCCCEEEE
Confidence 45678888 788765 5566679999999998877655443 4544 7999999999999999999999999
Q ss_pred EeCCCcc
Q 029743 150 WDLDDIL 156 (188)
Q Consensus 150 wd~~~~~ 156 (188)
||++++.
T Consensus 333 W~~~tGt 339 (340)
T 4aow_A 333 WQVTIGT 339 (340)
T ss_dssp EEEEC--
T ss_pred EeCCCcC
Confidence 9998864
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=4.4e-27 Score=170.72 Aligned_cols=152 Identities=13% Similarity=0.160 Sum_probs=133.7
Q ss_pred Ceeecc----cCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCcccccce
Q 029743 1 MTFAAD----AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 1 l~~s~~----~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
++|+|+ +++|++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.|+.|++||++. +..+..
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~ 153 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-DTLVAI 153 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-TEEEEE
T ss_pred EEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-CeEEEE
Confidence 468888 67999999999999999999999999999999999999999 899999999999999999986 455666
Q ss_pred e---eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeeccc----------------------------CCC
Q 029743 76 F---VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE----------------------------HSE 123 (188)
Q Consensus 76 ~---~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~----------------------------~~~ 123 (188)
+ .. |...+.++ |+|+++++++++.|+.|++||+++++....+.. |..
T Consensus 154 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 154 FGGVEG-HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp ECSTTS-CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred eccccc-ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 5 56 88999999 899999999999999999999988765544433 655
Q ss_pred cceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 124 YPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 124 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
.|.+++|+ +++|++++.|+.|++||+.+...
T Consensus 233 -~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 233 -YVDCVRWL--GDLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp -CCCEEEEE--TTEEEEECSSSEEEEEEESSTTC
T ss_pred -eEEEEEEc--CCEEEEEecCCEEEEEeCCCccc
Confidence 89999998 77999999999999999987643
No 76
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.3e-26 Score=165.87 Aligned_cols=152 Identities=13% Similarity=0.062 Sum_probs=125.0
Q ss_pred eeecccCeEEEEeCCCcEEEEEcC---------CCceeeeec-ccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCc
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLR---------KNTVQTRSE-FSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYF 69 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~ 69 (188)
.|+|+ +++++.|++|++|+.. +++.+..+. .|...|.+++|+| +++++++++.|+.|++||++.
T Consensus 83 ~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~- 158 (343)
T 3lrv_A 83 GEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED- 158 (343)
T ss_dssp CCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS-
T ss_pred eeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC-
Confidence 46666 8999999999999765 444344443 6778899999999 999999999999999999986
Q ss_pred ccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeee-eeccc-CCCcceeEEEeeCCCCEEEEEeCCCc
Q 029743 70 KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRII-QPIAE-HSEYPIESLALSHDRKFLGSISHDSM 146 (188)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 146 (188)
+.........+...+.++ |+|++.++++|+.|+.|++||+++++.. ..+.. |.. +|.+++|+|++.+|++++ ++.
T Consensus 159 ~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~-~v~~l~fs~~g~~l~s~~-~~~ 236 (343)
T 3lrv_A 159 DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA-KIKEVKFADNGYWMVVEC-DQT 236 (343)
T ss_dssp SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS-CEEEEEECTTSSEEEEEE-SSB
T ss_pred CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC-CEEEEEEeCCCCEEEEEe-CCe
Confidence 455544433155578898 8999999999999999999999998877 77877 765 899999999999999999 559
Q ss_pred EEEEeCCCccCCC
Q 029743 147 LKLWDLDDILKGS 159 (188)
Q Consensus 147 i~iwd~~~~~~~~ 159 (188)
|++||+++.....
T Consensus 237 v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 237 VVCFDLRKDVGTL 249 (343)
T ss_dssp EEEEETTSSTTCB
T ss_pred EEEEEcCCCCcce
Confidence 9999999876543
No 77
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.6e-26 Score=166.64 Aligned_cols=153 Identities=17% Similarity=0.244 Sum_probs=133.2
Q ss_pred Ceeecc--cCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeCCcc-ccc
Q 029743 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCS 73 (188)
Q Consensus 1 l~~s~~--~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~-~~~ 73 (188)
++|+|+ +++|++++.|+.|++||+.+++ .+..+..|...|.+++|+|+ +++|++++.|+.|++||+.... ...
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee
Confidence 467776 8999999999999999999886 66777789999999999999 9999999999999999997642 233
Q ss_pred ceeeeccCCceeEE-eec-------------CCCEEEEecCCCeEEEEecccCe----eeeecccCCCcceeEEEeeCC-
Q 029743 74 DRFVGLSPNSVDAL-LKL-------------DEDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLALSHD- 134 (188)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~-------------~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~~v~~~~~~~~- 134 (188)
..+.. |...+.++ |+| ++.++++++.|+.|++||++++. ....+.+|.. .|.+++|+|+
T Consensus 141 ~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~-~v~~~~~sp~~ 218 (379)
T 3jrp_A 141 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 218 (379)
T ss_dssp EEEEC-CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred EEecC-CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC-cEeEEEECCCC
Confidence 34566 88899999 888 69999999999999999998754 4566777866 8999999999
Q ss_pred --CCEEEEEeCCCcEEEEeCCCc
Q 029743 135 --RKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 135 --~~~l~~~~~d~~i~iwd~~~~ 155 (188)
+++|++++.|+.|++||+++.
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCeEEEEeCCCEEEEEeCCCC
Confidence 899999999999999999875
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=2.5e-26 Score=166.76 Aligned_cols=153 Identities=14% Similarity=0.228 Sum_probs=132.7
Q ss_pred Ceeecc----cCeEEEEeCCCcEEEEEcCCCceeeeecc-----cccceEEEEEEeC----CCEEEEecCCCeEEEEEeC
Q 029743 1 MTFAAD----AMKLLGTSGDGTLSVCNLRKNTVQTRSEF-----SEEELTSVVLMKN----GRKVVCGSQSGTVLLYSWG 67 (188)
Q Consensus 1 l~~s~~----~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~d~~i~~~d~~ 67 (188)
++|+|+ ...+++++.++.|++|++.+++.+..+.. |...|.+++|+|+ +++|++++.|+.|++||+.
T Consensus 24 i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~ 103 (366)
T 3k26_A 24 VQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPI 103 (366)
T ss_dssp EEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTT
T ss_pred EEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEch
Confidence 468873 45566667778999999998777666653 5577999999998 6799999999999999998
Q ss_pred CcccccceeeeccCCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeec---ccCCCcceeEEEeeCCCCEEEEEe
Q 029743 68 YFKDCSDRFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPI---AEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 68 ~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
. ++.+..+.+ |...+.++ |+| ++.++++++.|+.|++||+++++.+..+ ..|.. .|.+++|+|++++|++++
T Consensus 104 ~-~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 104 T-MQCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD-EVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp T-CCEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-CEEEEEECTTSSEEEEEE
T ss_pred h-ceEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-ceeEEEECCCCCEEEEec
Confidence 6 577788888 99999999 899 8999999999999999999999988887 66755 899999999999999999
Q ss_pred CCCcEEEEeCCCcc
Q 029743 143 HDSMLKLWDLDDIL 156 (188)
Q Consensus 143 ~d~~i~iwd~~~~~ 156 (188)
.|+.|++||+++..
T Consensus 181 ~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 181 MDHSLKLWRINSKR 194 (366)
T ss_dssp TTSCEEEEESCSHH
T ss_pred CCCCEEEEECCCCc
Confidence 99999999999764
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.9e-26 Score=160.74 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=132.5
Q ss_pred eeec-ccCeEEEEeCCCcEEEEEcCCCceeeeecc-cccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeec
Q 029743 2 TFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL 79 (188)
Q Consensus 2 ~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (188)
+|+| +++++++++.|+.|++|| .++....+.. |...+.+++|+|++. +++++.++.|++||++. +..+..+..
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~-~~~~~~~~~- 223 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT-GDVLRTYEG- 223 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT-CCEEEEEEC-
T ss_pred EEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc-hhhhhhhhc-
Confidence 4666 899999999999999999 4555566665 889999999999988 99999999999999986 577888888
Q ss_pred cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
|...+.++ |+|++ .+++++.|+.|++||+++++++..+..|.. .|.+++|+|+++ +++++.|+.|++|++++....
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI-SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSS-CEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCc-eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 99999999 89999 688999999999999999999999988865 899999999998 667889999999999987655
Q ss_pred C
Q 029743 159 S 159 (188)
Q Consensus 159 ~ 159 (188)
.
T Consensus 301 ~ 301 (313)
T 3odt_A 301 S 301 (313)
T ss_dssp C
T ss_pred e
Confidence 4
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=7.7e-26 Score=166.38 Aligned_cols=152 Identities=13% Similarity=0.117 Sum_probs=128.0
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCC-EEEEecCCCeEEEEEeCCccccccee--------
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRF-------- 76 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~-------- 76 (188)
++.++++++.++.|++||+.+++.+..+..|...|.+++|+|+++ .|++++.|+.|++||++.....+..+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 566999999999999999999988889999999999999999998 58899999999999997644344333
Q ss_pred -------eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCe-----------------------------------
Q 029743 77 -------VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNR----------------------------------- 113 (188)
Q Consensus 77 -------~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~----------------------------------- 113 (188)
.. |...+.++ |+|+++++++++.|+.|++||+++++
T Consensus 235 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 235 QAVESANTA-HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CCTTTSSCS-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred eeecccccc-ccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 45 78889999 89999999999999999999987543
Q ss_pred ------------eeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCCC
Q 029743 114 ------------IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 114 ------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (188)
++..+.+|.. .|.+++|+|++++|++++.||.|++||+++.....
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYK-TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSS-CEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred CEEEEEECcCCcceeeeccCCC-eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 3444566755 89999999999999999999999999999876554
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=172.37 Aligned_cols=153 Identities=14% Similarity=0.135 Sum_probs=127.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC-Cceee-------eecccccceEEEEEEeCC-CEEEEecCCCeEEEEEeCCccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NTVQT-------RSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKD 71 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~ 71 (188)
++|+|++++|++| .|+.|++||+.. ++... .+.+|...|.+++|+|++ ++|++++.|+.|++||++.. .
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~ 260 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS-A 260 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC-S
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC-c
Confidence 4799999999998 799999999984 44443 356899999999999998 99999999999999999863 4
Q ss_pred c----cceeeeccCC------------ceeEE-eecCCCEEEEecCCCeEEEEeccc-CeeeeecccCCCc---------
Q 029743 72 C----SDRFVGLSPN------------SVDAL-LKLDEDRVITGSENGLISLVGILP-NRIIQPIAEHSEY--------- 124 (188)
Q Consensus 72 ~----~~~~~~~~~~------------~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~--------- 124 (188)
. ...+.. +.. .+.++ |+|+|++|++++. +.|++||+++ ++++..+..|...
T Consensus 261 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 261 LCDRHSKLFEE-PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSCTTCEEECC-C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cccceeeEecc-CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 3 566666 665 89999 8999999999999 9999999997 8888888877420
Q ss_pred -----ceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 125 -----PIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 125 -----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
.+..++|+|++++|++++.|+.|++||+.+...
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 023499999999999999999999999988654
No 82
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=5.7e-26 Score=178.25 Aligned_cols=154 Identities=23% Similarity=0.316 Sum_probs=131.6
Q ss_pred Ceeecc-cCeEEEEeCCCcEEEEEcCCC-----ceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccc
Q 029743 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKN-----TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~-~~~l~~~~~d~~i~i~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 74 (188)
++|+|+ +++|++|+.|++|++|++... .....+.+|...|.+++|+|++++|++++.|+.|++||+.. +....
T Consensus 388 v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~-~~~~~ 466 (694)
T 3dm0_A 388 IATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA-GVSTR 466 (694)
T ss_dssp EECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEE
T ss_pred EEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC-Cccee
Confidence 467776 478999999999999998753 34567789999999999999999999999999999999986 57778
Q ss_pred eeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeee---cccCCCcceeEEEeeCCC--CEEEEEeCCCcEE
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLALSHDR--KFLGSISHDSMLK 148 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~---~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~ 148 (188)
.+.+ |...|.++ |+|++++|++++.|+.|++||+........ ..+|.. .|.+++|+|++ ..|++++.|+.|+
T Consensus 467 ~~~~-h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 467 RFVG-HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD-WVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEEC-CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS-CEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred EEeC-CCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC-cEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 8889 99999999 899999999999999999999865443322 245655 79999999987 5799999999999
Q ss_pred EEeCCCccC
Q 029743 149 LWDLDDILK 157 (188)
Q Consensus 149 iwd~~~~~~ 157 (188)
+||+++...
T Consensus 545 vwd~~~~~~ 553 (694)
T 3dm0_A 545 VWNLSNCKL 553 (694)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999987654
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=4.6e-26 Score=168.28 Aligned_cols=155 Identities=14% Similarity=0.221 Sum_probs=130.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCC-CEEEEec--CCCeEEEEEeCCcccccceee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGS--QSGTVLLYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~d~~i~~~d~~~~~~~~~~~~ 77 (188)
++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|++ ..+++++ .|+.|++||+.. +..+..+.
T Consensus 223 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~ 301 (401)
T 4aez_A 223 LAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD 301 (401)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe
Confidence 4799999999999999999999999999988888999999999999976 4555654 799999999986 46666665
Q ss_pred eccCCceeEE-eecCCCEEEE--ecCCCeEEEEecccCeeee--ecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 78 GLSPNSVDAL-LKLDEDRVIT--GSENGLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~--~~~d~~v~~~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
+...+.++ |+|+++++++ |+.+|.|++|++.++.... .+.+|.. .|.+++|+|++++|++++.|+.|++|++
T Consensus 302 --~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~-~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 302 --AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT-RVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp --CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS-CCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred --CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC-CEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 56778888 8999999998 5589999999999865443 4667865 8999999999999999999999999999
Q ss_pred CCccCCC
Q 029743 153 DDILKGS 159 (188)
Q Consensus 153 ~~~~~~~ 159 (188)
.+.....
T Consensus 379 ~~~~~~~ 385 (401)
T 4aez_A 379 YDGDHVK 385 (401)
T ss_dssp CC-----
T ss_pred CCCcccc
Confidence 9876543
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=6.8e-26 Score=168.33 Aligned_cols=153 Identities=14% Similarity=0.181 Sum_probs=128.4
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCc----eeeeecccccceEEEEEEeCC-CEEEE--ecCCCeEEEEEeCCcccccc
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNT----VQTRSEFSEEELTSVVLMKNG-RKVVC--GSQSGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~d~~i~~~d~~~~~~~~~ 74 (188)
.++|+++++++++.|+.+++|+...++ .+.....|...|.+++|+|.+ ..+++ |+.|+.|++||+.+ +.+..
T Consensus 237 ~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~ 315 (420)
T 4gga_A 237 RWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLS 315 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEE
T ss_pred eecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccce
Confidence 578999999999999999999998764 334556789999999999966 45544 56799999999986 56666
Q ss_pred eeeeccCCceeEE-eecCCCEEEEec--CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
.+.. +. .+.++ ++|+++.+++++ .|+.|++||+++++++..+.+|.+ .|.+++|+|++++|++++.|++|++||
T Consensus 316 ~~~~-~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~-~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 316 AVDA-HS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTS-RVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp EEEC-SS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred eecc-cc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCC-CEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 6665 44 45555 899999887754 789999999999999999999976 899999999999999999999999999
Q ss_pred CCCccCC
Q 029743 152 LDDILKG 158 (188)
Q Consensus 152 ~~~~~~~ 158 (188)
+....+.
T Consensus 393 v~~~~~~ 399 (420)
T 4gga_A 393 CFELDPA 399 (420)
T ss_dssp CSCSSCC
T ss_pred CCCCCcc
Confidence 9875543
No 85
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=1.3e-25 Score=168.51 Aligned_cols=154 Identities=20% Similarity=0.272 Sum_probs=134.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcccc------
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDC------ 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~------ 72 (188)
++|+|++ +|++|+.|++|++||+.+++.+..+.+|...|.+++|++ +++++++++.|+.|++||++.....
T Consensus 168 l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 168 LKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 4678877 999999999999999999999999999999999999995 7789999999999999999753221
Q ss_pred ----------------cceeeeccCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC
Q 029743 73 ----------------SDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 73 ----------------~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
...+.+ |...+.++ +++++++++++.|+.|++||+++++++..+.+|.. .|.+++|+|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~ 323 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRG-HMASVRTV-SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERK 323 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECC-CSSCEEEE-EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTT
T ss_pred CCcceEeeccCCCeEEEEEccC-ccceEEEE-cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCC
Confidence 334556 66666665 78899999999999999999999999999999876 899999999999
Q ss_pred EEEEEeCCCcEEEEeCCCccCC
Q 029743 137 FLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
+|++++.|+.|++||+++....
T Consensus 324 ~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEeCCCcEEEEECCCCcEE
Confidence 9999999999999999876543
No 86
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=8e-26 Score=164.08 Aligned_cols=110 Identities=13% Similarity=0.173 Sum_probs=96.1
Q ss_pred Ceeecc---cCeEEEEeCCCcEEEEEcCC-Ccee-eeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce
Q 029743 1 MTFAAD---AMKLLGTSGDGTLSVCNLRK-NTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 1 l~~s~~---~~~l~~~~~d~~i~i~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
++|+|+ |++|++++.|+.|++|++.+ +..+ ..+.+|...|.+++|+|++++|++++.|+.|++||+.. +... .
T Consensus 45 ~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~-~ 122 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS-NQAI-Q 122 (368)
T ss_dssp EEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEE-E
T ss_pred EEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC-CCce-e
Confidence 479998 69999999999999999987 5444 67788999999999999999999999999999999986 3443 3
Q ss_pred eeeccCCceeEE-e--ecCCCEEEEecCCCeEEEEecccCe
Q 029743 76 FVGLSPNSVDAL-L--KLDEDRVITGSENGLISLVGILPNR 113 (188)
Q Consensus 76 ~~~~~~~~v~~~-~--~~~~~~l~~~~~d~~v~~~d~~~~~ 113 (188)
+.. |...+.++ | +|++.++++++.|+.|++||+++++
T Consensus 123 ~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 123 IAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 566 89999999 7 8899999999999999999987654
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.5e-26 Score=172.61 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=121.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeeccccc-----ceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc----
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-----ELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD---- 71 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---- 71 (188)
++|||+|++||+++.||+|++|+.+. ++..+. |.. .+.+++|+|+|++|++|+.||+|++||+.....
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccc
Confidence 57999999999999999999999544 555566 655 499999999999999999999999999976321
Q ss_pred --cccee----eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCee---eeec-ccCCCcceeEEEeeCCCCEEEE
Q 029743 72 --CSDRF----VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI---IQPI-AEHSEYPIESLALSHDRKFLGS 140 (188)
Q Consensus 72 --~~~~~----~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~---~~~~-~~~~~~~v~~~~~~~~~~~l~~ 140 (188)
.+..+ .+ |...|.++ |+|+| +++++.|+.|++|++..+.. ..++ .+|.. .|.+++|+ ++.|++
T Consensus 168 ~i~l~ti~~~~~g-h~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~-~V~svaFs--g~~LAS 241 (588)
T 2j04_A 168 FYFESSIRLSDAG-SKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR-KITDLKIV--DYKVVL 241 (588)
T ss_dssp CEEEEEEECSCTT-CCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS-CCCCEEEE--TTEEEE
T ss_pred ceeeeeeeccccc-ccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccC-cEEEEEEE--CCEEEE
Confidence 24555 45 66799999 89999 88888999999999987773 2455 35644 79999999 688888
Q ss_pred EeCCCcEEEEeCCCccC
Q 029743 141 ISHDSMLKLWDLDDILK 157 (188)
Q Consensus 141 ~~~d~~i~iwd~~~~~~ 157 (188)
++ ++.|++||+.+...
T Consensus 242 a~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 242 TC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp EC-SSEEEEEETTTTEE
T ss_pred Ee-CCeEEEEECCCCeE
Confidence 87 69999999997665
No 88
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.1e-26 Score=183.41 Aligned_cols=151 Identities=17% Similarity=0.148 Sum_probs=131.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccc-------
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCS------- 73 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~------- 73 (188)
|+|+| +++|++++.|++|++||+.+++.+..+. |...|++++|+|++++|++|+.||.|++||++.. ...
T Consensus 64 l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-~~~~~~i~~~ 140 (902)
T 2oaj_A 64 MRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD-QLSSFKLDNL 140 (902)
T ss_dssp EEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT-EEEEEEECCH
T ss_pred EEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC-ccccceeccc
Confidence 47999 8899999999999999999998888776 6789999999999999999999999999999753 321
Q ss_pred ----ceeeeccCCceeEE-eecC-CCEEEEecCCCeEEEEecccCeeeeecccC------------------CCcceeEE
Q 029743 74 ----DRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEH------------------SEYPIESL 129 (188)
Q Consensus 74 ----~~~~~~~~~~v~~~-~~~~-~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------------------~~~~v~~~ 129 (188)
..+.+ |...|.++ |+|+ +..+++|+.|+.| +||+++++++..+..| .. .|.++
T Consensus 141 ~~~~~~~~~-h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~-~V~~v 217 (902)
T 2oaj_A 141 QKSSFFPAA-RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTP-KVIQS 217 (902)
T ss_dssp HHHHTCSSS-CCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCC-CEEEE
T ss_pred ccccccccc-CCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCC-CeEEE
Confidence 23456 88899999 8995 5789999999999 9999999888777654 23 69999
Q ss_pred EeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 130 ALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 130 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+|+|++++|++++.|+.|++||+++...
T Consensus 218 ~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 218 LYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999999999999999987653
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=5e-26 Score=180.79 Aligned_cols=156 Identities=17% Similarity=0.202 Sum_probs=141.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++|++.+++.+..+.+|...|.+++|+|++++|++++.|+.|++|++.........+.+ |
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-~ 139 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-H 139 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-C
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-C
Confidence 479999999999999999999999999999999999999999999999999999999999999999865466777888 9
Q ss_pred CCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeC--CCCEEEEEeCCCcEEEEeCCCcc
Q 029743 81 PNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH--DRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 81 ~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
...+.++ |+| ++..+++++.||.|++||+.++.....+..+....+..++|+| ++.+|++++.|+.|++||+++..
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 9999999 899 8899999999999999999988877777666534799999999 99999999999999999998765
Q ss_pred C
Q 029743 157 K 157 (188)
Q Consensus 157 ~ 157 (188)
.
T Consensus 220 ~ 220 (814)
T 3mkq_A 220 C 220 (814)
T ss_dssp E
T ss_pred E
Confidence 3
No 90
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=1.4e-25 Score=167.18 Aligned_cols=153 Identities=16% Similarity=0.215 Sum_probs=131.8
Q ss_pred CeeecccC-eEEEEeCCCcEEEEEcCCCce-------eeeecccccceEEEEEEe-CCCEEEEecCCCeEEEEEeCCcc-
Q 029743 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTV-------QTRSEFSEEELTSVVLMK-NGRKVVCGSQSGTVLLYSWGYFK- 70 (188)
Q Consensus 1 l~~s~~~~-~l~~~~~d~~i~i~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~- 70 (188)
|+|+|+++ +|++|+.||.|++|++..+.. ...+.+|...|.+++|+| ++..|++++.|+.|++||++...
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 47899988 999999999999999987322 345568999999999999 67899999999999999998642
Q ss_pred -cccceeeeccCCceeEE-eecCCC-EEEEecCCCeEEEEeccc-CeeeeecccCCCcceeEEEeeCCCC-EEEEEeCCC
Q 029743 71 -DCSDRFVGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILP-NRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDS 145 (188)
Q Consensus 71 -~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 145 (188)
..+..+.. |...+.++ |+|++. ++++|+.||.|++||+++ ..++..+..|.. .|.+++|+|+++ +|++++.|+
T Consensus 267 ~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~-~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 267 SKPSHTVDA-HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD-EIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp SSCSEEEEC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS-CEEEEEECSSCTTEEEEEETTS
T ss_pred CcceeEeec-CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC-CEEEEEECCCCCCEEEEEeCCC
Confidence 46666777 89999999 899887 688999999999999997 567788888866 899999999985 688999999
Q ss_pred cEEEEeCCCc
Q 029743 146 MLKLWDLDDI 155 (188)
Q Consensus 146 ~i~iwd~~~~ 155 (188)
.|++||+...
T Consensus 345 ~i~iwd~~~~ 354 (430)
T 2xyi_A 345 RLHVWDLSKI 354 (430)
T ss_dssp CCEEEEGGGT
T ss_pred cEEEEeCCCC
Confidence 9999999873
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.4e-26 Score=170.40 Aligned_cols=156 Identities=11% Similarity=0.151 Sum_probs=126.5
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCC---Cce---eeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC--ccc
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRK---NTV---QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY--FKD 71 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~---~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~--~~~ 71 (188)
++|+| ++++|++|+.|+.|++||+.. +.. ...+ .|...|.+++|+|++++|++++.|+.|++||+.. .+.
T Consensus 69 ~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 69 SAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp EEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETT
T ss_pred EEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCc
Confidence 47999 999999999999999999876 432 2222 5899999999999999999999999999999951 133
Q ss_pred ccceeee--------c---cCCceeEE---eecCCCEEEEecCCCeEEEEecccCeeeeeccc--CCCcceeEEEeeCCC
Q 029743 72 CSDRFVG--------L---SPNSVDAL---LKLDEDRVITGSENGLISLVGILPNRIIQPIAE--HSEYPIESLALSHDR 135 (188)
Q Consensus 72 ~~~~~~~--------~---~~~~v~~~---~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~ 135 (188)
....+.. . +...+.++ +++++.++++++.|+.|++||+++++++..+.. |.. .|.+++|+|++
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~-~v~~~~~s~~~ 226 (437)
T 3gre_A 148 EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG-AVSSICIDEEC 226 (437)
T ss_dssp EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC-CEEEEEECTTS
T ss_pred eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC-ceEEEEECCCC
Confidence 3333222 0 12334444 257899999999999999999999999999887 655 89999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCccCC
Q 029743 136 KFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
++|++++.|+.|++||+++....
T Consensus 227 ~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 227 CVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp CEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEcCCCeEEEEEcCCccEE
Confidence 99999999999999999876543
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.7e-26 Score=168.83 Aligned_cols=154 Identities=10% Similarity=0.188 Sum_probs=132.8
Q ss_pred eecccCeEEEEeCCCcEEEEEcCCCceeeeecc--cccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceee-ec
Q 029743 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF--SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-GL 79 (188)
Q Consensus 3 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~ 79 (188)
++|++++|++++.|+.|++||+++++.+..+.. |...|.+++|+|++++|++++.|+.|++||++. +.++..+. .
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~- 255 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFG- 255 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCT-
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecC-
Confidence 557899999999999999999999999888887 889999999999999999999999999999986 56666665 5
Q ss_pred cCCceeEE-ee----cCCCEEEEecCCCeEEEEecccCeeeeecccCC-------------------------CcceeEE
Q 029743 80 SPNSVDAL-LK----LDEDRVITGSENGLISLVGILPNRIIQPIAEHS-------------------------EYPIESL 129 (188)
Q Consensus 80 ~~~~v~~~-~~----~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-------------------------~~~v~~~ 129 (188)
+...+.++ ++ |++.++++++.|+.|++||+++++++..+.+|. ...|+++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 77788888 54 568899999999999999999888776665431 2358899
Q ss_pred EeeCCCCEEEEEeCCCcEEEEeCCCccCCC
Q 029743 130 ALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 130 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (188)
+|+ ++++|++++.|+.|++||+.+.....
T Consensus 336 ~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 336 SVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 999 77899999999999999999877544
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=9.6e-26 Score=166.55 Aligned_cols=154 Identities=10% Similarity=0.215 Sum_probs=133.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC----CceeeeecccccceEEEEEEeC-CCEEEEecCCCeEEEEEeCCcc-----
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWGYFK----- 70 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~----- 70 (188)
++|+|++++|++++.|+.|++|++.. .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+....
T Consensus 73 ~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 73 LDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 47999999999999999999999987 3577788899999999999998 8999999999999999997643
Q ss_pred -cc--cceeeeccCCceeEE-eecC-CCEEEEecCCCeEEEEecccCeeeeecccCC-----CcceeEEEeeCCC-CEEE
Q 029743 71 -DC--SDRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHS-----EYPIESLALSHDR-KFLG 139 (188)
Q Consensus 71 -~~--~~~~~~~~~~~v~~~-~~~~-~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~-~~l~ 139 (188)
.. ...... |...+.++ |+|+ +.++++++.|+.|++||+++++.+..+..+. ...|.+++|+|++ .+|+
T Consensus 153 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 153 YTPLTPGQSMS-SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCCBCCCCSCC-SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred ccccccccccC-CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 11 122356 78889999 8998 7899999999999999999999888887652 2379999999997 6889
Q ss_pred EEeCCC---cEEEEeCCCc
Q 029743 140 SISHDS---MLKLWDLDDI 155 (188)
Q Consensus 140 ~~~~d~---~i~iwd~~~~ 155 (188)
+++.|+ .|++||+++.
T Consensus 232 ~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 232 TATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECCSSSCCCCEEETTST
T ss_pred EEECCCCCceEEEEeCCCC
Confidence 999998 9999999985
No 94
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=8.1e-26 Score=166.72 Aligned_cols=153 Identities=9% Similarity=0.047 Sum_probs=121.5
Q ss_pred eecccCeEEEEeCCCcEEEEEcCCCcee-----eeecccccceEEEEEEe--------CCCEEEEecCCCeEEEEEeCCc
Q 029743 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQ-----TRSEFSEEELTSVVLMK--------NGRKVVCGSQSGTVLLYSWGYF 69 (188)
Q Consensus 3 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~~~d~~~~ 69 (188)
+++++++|++++.|++|++||...+... ..+.+|...|.+++|+| ++++|++++.|++|++||+..
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~- 175 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD- 175 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET-
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC-
Confidence 4567889999999999999999887543 34678999999999998 789999999999999999976
Q ss_pred ccccceeeeccCCceeEE-eecCCC-EEEEecCCCeEEEEecccCeeeeec-------------------------ccCC
Q 029743 70 KDCSDRFVGLSPNSVDAL-LKLDED-RVITGSENGLISLVGILPNRIIQPI-------------------------AEHS 122 (188)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~-~~~~~~-~l~~~~~d~~v~~~d~~~~~~~~~~-------------------------~~~~ 122 (188)
+.++..+.. |...+.++ |+|++. +|++++.|+.|++||+++++..... .+|.
T Consensus 176 ~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 176 EGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 455566667 88899999 899874 8999999999999999876543221 2343
Q ss_pred CcceeEEEee-CCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 123 EYPIESLALS-HDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 123 ~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
. .+.++.|+ ++++.|++++.|+.+++||+......
T Consensus 255 ~-~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 255 S-SLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp S-SCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred c-cceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 4 68889987 79999999999999999999876543
No 95
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.2e-25 Score=164.64 Aligned_cols=151 Identities=17% Similarity=0.258 Sum_probs=138.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++ .+++++.++.|++|++..++.+..+..|...|.+++|+|++++|++++.|+.|++||++. +..+..+.. |
T Consensus 212 ~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~-~ 288 (425)
T 1r5m_A 212 VEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNSQNCFYG-H 288 (425)
T ss_dssp CEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS-BSCSEEECC-C
T ss_pred EEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CccceEecC-C
Confidence 4677764 588889999999999999988888889999999999999999999999999999999986 577778888 8
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
...+.++ |+|++ ++++++.++.|++||+++++.+..+..|.. .|.+++|+|++++|++++.|+.|++||+++..
T Consensus 289 ~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 289 SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV-PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC-CEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc-cEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 8999999 89999 999999999999999999999999988865 89999999999999999999999999998765
No 96
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.3e-25 Score=173.16 Aligned_cols=145 Identities=19% Similarity=0.250 Sum_probs=128.5
Q ss_pred cCeEEEEeC-CCcEEEEEcCCCcee-eeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCce
Q 029743 7 AMKLLGTSG-DGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (188)
Q Consensus 7 ~~~l~~~~~-d~~i~i~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 84 (188)
+++|++++. ++.|++|++..++.. ..+..|...|.+++|+|++++|++++.|+.|++||+.. +..+..+.+.|...+
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h~~~v 534 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS-REVKTSRWAFRTSKI 534 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEECCSCCCSSCE
T ss_pred CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC-CcceeEeecCCCCce
Confidence 778889998 999999999887665 66778999999999999999999999999999999986 455555543277889
Q ss_pred eEE-eec----------CCCEEEEecCCCeEEEEecccC-eeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 85 DAL-LKL----------DEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 85 ~~~-~~~----------~~~~l~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
.++ |+| ++++|++++.|+.|++||+.++ +++..+.+|.. .|.+++|+|+++ |++++.|+.|++|++
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~-~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD-GVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT-CEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc-ceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 999 899 9999999999999999999987 78888999976 899999999999 999999999999998
Q ss_pred CC
Q 029743 153 DD 154 (188)
Q Consensus 153 ~~ 154 (188)
+.
T Consensus 613 ~~ 614 (615)
T 1pgu_A 613 VL 614 (615)
T ss_dssp C-
T ss_pred ec
Confidence 74
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=1.8e-25 Score=161.86 Aligned_cols=153 Identities=16% Similarity=0.220 Sum_probs=128.4
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCc-eeeeeccccc----ceEEEE----EEeCCCEEEEecCCCeEEEEEeCCcccc
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSEFSEE----ELTSVV----LMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 72 (188)
+|+|++++|++++.|+.|++||+..+. .+..+..|.. .+.+++ |+|+++++++++.|+.|++||++.. ..
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~ 202 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM-AL 202 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT-EE
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccC-ce
Confidence 678999999999999999999999876 5666655444 788888 6789999999999999999999863 33
Q ss_pred cceeeeccCCceeEE-eec---CCCEEEEecCCCeEEEEecccCeeeeecc-----cCCCcceeEEEeeCCCC-EEEEEe
Q 029743 73 SDRFVGLSPNSVDAL-LKL---DEDRVITGSENGLISLVGILPNRIIQPIA-----EHSEYPIESLALSHDRK-FLGSIS 142 (188)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~---~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~-~l~~~~ 142 (188)
..... +...+.++ |+| ++.++++++.++.|++||++++++...+. +|.. .|.+++|+|+++ +|++++
T Consensus 203 -~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 203 -RWETN-IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS-TVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp -EEEEE-CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS-CEEEEEEETTEEEEEEEEE
T ss_pred -eeecC-CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC-CEEEEEECCCCCcEEEEEe
Confidence 34455 78899999 899 99999999999999999999887665554 7765 899999999998 899999
Q ss_pred CCCcEEEEeCCCccCC
Q 029743 143 HDSMLKLWDLDDILKG 158 (188)
Q Consensus 143 ~d~~i~iwd~~~~~~~ 158 (188)
.|+.|++||++.....
T Consensus 280 ~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 280 GAGGLHLWKYEYPIQR 295 (357)
T ss_dssp TTSEEEEEEEECCSCC
T ss_pred CCCcEEEeecCCCccc
Confidence 9999999999876543
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.8e-25 Score=165.64 Aligned_cols=149 Identities=10% Similarity=0.142 Sum_probs=130.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceee----eecccccceEEEEEEeC---CCEEEEecCCCeEEEEEeCCccccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT----RSEFSEEELTSVVLMKN---GRKVVCGSQSGTVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~ 73 (188)
++|+|++++|++++.++.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|++||++. +..+
T Consensus 155 ~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~ 233 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIV 233 (450)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-Ccee
Confidence 4799999999999999999999998776543 67789999999999999 99999999999999999986 4555
Q ss_pred ce-eeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccC------------------------CCccee
Q 029743 74 DR-FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------------------SEYPIE 127 (188)
Q Consensus 74 ~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------------------------~~~~v~ 127 (188)
.. +.+ |...+.++ |+ ++++|++++.|+.|++||+++++++..+..+ ....|.
T Consensus 234 ~~~~~~-h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 234 DKWLFG-HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEECCC-CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeecC-CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 55 557 89999999 89 9999999999999999999999877766522 123689
Q ss_pred EEEeeCCCCEEEEEe-CCCcEEEEeC
Q 029743 128 SLALSHDRKFLGSIS-HDSMLKLWDL 152 (188)
Q Consensus 128 ~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (188)
+++|+|++++|++++ .++.|++|++
T Consensus 312 ~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999999998 8999999999
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=4.8e-25 Score=169.99 Aligned_cols=159 Identities=14% Similarity=0.186 Sum_probs=130.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCC----ceeeeecccccc-eEEEEEEe--CCCEEEEecCCCeEEEEEeCCc----
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----TVQTRSEFSEEE-LTSVVLMK--NGRKVVCGSQSGTVLLYSWGYF---- 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~---- 69 (188)
++|+|++++|++++ ++.|++|++.++ +....+.+|... |.+++|+| ++++|++++.|+.|++||+...
T Consensus 24 ~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~ 102 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN 102 (615)
T ss_dssp CEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT
T ss_pred EEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc
Confidence 58999999999998 789999999988 888899999999 99999999 9999999999999999999532
Q ss_pred ---ccccceeeeccC--------------------------------------------CceeEE-eecCCC-EEEEecC
Q 029743 70 ---KDCSDRFVGLSP--------------------------------------------NSVDAL-LKLDED-RVITGSE 100 (188)
Q Consensus 70 ---~~~~~~~~~~~~--------------------------------------------~~v~~~-~~~~~~-~l~~~~~ 100 (188)
......+.. |. ..+.++ |+|+++ ++++++.
T Consensus 103 ~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 181 (615)
T 1pgu_A 103 SVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD 181 (615)
T ss_dssp EEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEET
T ss_pred cccccccchhhc-ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeC
Confidence 133333333 33 345555 555555 6778888
Q ss_pred CCeEEEEecccCeeeeecccCCCc--ceeEEEeeCC-CCEEEEEeCCCcEEEEeCCCccCCCCC
Q 029743 101 NGLISLVGILPNRIIQPIAEHSEY--PIESLALSHD-RKFLGSISHDSMLKLWDLDDILKGSGN 161 (188)
Q Consensus 101 d~~v~~~d~~~~~~~~~~~~~~~~--~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~ 161 (188)
|+.|++||+.+++.+..+..|... .|.+++|+|+ +++|++++.|+.|++||+++.......
T Consensus 182 d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 899999999999999999888431 6999999999 999999999999999999877654433
No 100
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=5.5e-25 Score=160.29 Aligned_cols=152 Identities=13% Similarity=0.105 Sum_probs=124.5
Q ss_pred eeecccCeE-EEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCC-------------------------------
Q 029743 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG------------------------------- 49 (188)
Q Consensus 2 ~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------------- 49 (188)
++.++++.+ ++++.+++|++||..+++.+..+. +...|.+++++++.
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 456666776 456677899999999998887776 56688888887642
Q ss_pred ----CEEEE--ecCCCeEEEEEeCCcc--------------c-ccceeeeccCCceeEE-eecCCCEEEEecCCCe-EEE
Q 029743 50 ----RKVVC--GSQSGTVLLYSWGYFK--------------D-CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGL-ISL 106 (188)
Q Consensus 50 ----~~l~~--~~~d~~i~~~d~~~~~--------------~-~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~-v~~ 106 (188)
..+++ ++.+|.|++||+.... . ++..+.+ |...|.++ |+|+|++|++++.|++ |++
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~-h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA-HTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECC-CSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc-cCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 23333 5778899999987532 0 2677888 99999999 8999999999999998 999
Q ss_pred EecccCeeeeecc-c-CCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 107 VGILPNRIIQPIA-E-HSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 107 ~d~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
||+++++++..+. + |.. .|.+++|+|++++|++++.|+.|++||++...
T Consensus 223 wd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EETTTCCEEEEEECTTCCS-CEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred EECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999999999997 5 755 89999999999999999999999999998653
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-25 Score=178.27 Aligned_cols=153 Identities=16% Similarity=0.167 Sum_probs=133.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcC--CCceeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeCCcc-cccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~-~~~~~ 75 (188)
++|+|++++|++|+.||.|++|++. ++.....+.+|...|.+++|+|+ +++|++++.||.|++||+.... .....
T Consensus 15 l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~ 94 (753)
T 3jro_A 15 AVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV 94 (753)
T ss_dssp ECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred EEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc
Confidence 4799999999999999999999998 45667788899999999999988 9999999999999999997632 25666
Q ss_pred eeeccCCceeEE-eecC--CCEEEEecCCCeEEEEecccCe--eeeecccCCCcceeEEEeeC-------------CCCE
Q 029743 76 FVGLSPNSVDAL-LKLD--EDRVITGSENGLISLVGILPNR--IIQPIAEHSEYPIESLALSH-------------DRKF 137 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~--~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~-------------~~~~ 137 (188)
+.+ |...+.++ |+|+ ++++++++.||.|++||++++. ....+.+|.. .|.+++|+| ++.+
T Consensus 95 ~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~-~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 95 HAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp ECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS-CEEEEEECCCC---------CGGGCC
T ss_pred ccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC-ceEEEEecCcccccccccccCCCCCE
Confidence 777 89999999 8998 9999999999999999998773 3445567755 899999999 5899
Q ss_pred EEEEeCCCcEEEEeCCCc
Q 029743 138 LGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~~ 155 (188)
|++++.||.|++||+++.
T Consensus 173 l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp EEEEETTSCEEEEEEETT
T ss_pred EEEEECCCeEEEEeccCC
Confidence 999999999999999865
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4e-25 Score=174.93 Aligned_cols=154 Identities=17% Similarity=0.236 Sum_probs=135.1
Q ss_pred Ceeecc--cCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEeC--CCEEEEecCCCeEEEEEeCCcc-ccc
Q 029743 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKN--GRKVVCGSQSGTVLLYSWGYFK-DCS 73 (188)
Q Consensus 1 l~~s~~--~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~-~~~ 73 (188)
++|+|+ +++|++|+.||.|++||+.+++ ....+.+|...|.+++|+|+ ++.+++++.|+.|++||++... ...
T Consensus 59 l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~ 138 (753)
T 3jro_A 59 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 138 (753)
T ss_dssp EEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC
T ss_pred EEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce
Confidence 468887 9999999999999999999886 66677789999999999999 9999999999999999997642 234
Q ss_pred ceeeeccCCceeEE-eec-------------CCCEEEEecCCCeEEEEecccC----eeeeecccCCCcceeEEEeeCC-
Q 029743 74 DRFVGLSPNSVDAL-LKL-------------DEDRVITGSENGLISLVGILPN----RIIQPIAEHSEYPIESLALSHD- 134 (188)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~-------------~~~~l~~~~~d~~v~~~d~~~~----~~~~~~~~~~~~~v~~~~~~~~- 134 (188)
..+.+ |...+.++ |+| ++.++++|+.||.|++||++++ .+...+.+|.. .|.+++|+|+
T Consensus 139 ~~~~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~-~V~~l~~sp~~ 216 (753)
T 3jro_A 139 IIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-WVRDVAWSPTV 216 (753)
T ss_dssp EEEEC-CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-CEEEEEECCCC
T ss_pred eEeec-CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC-cEEEEEeccCC
Confidence 45667 88899999 888 5899999999999999999876 56667788866 8999999999
Q ss_pred --CCEEEEEeCCCcEEEEeCCCcc
Q 029743 135 --RKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 135 --~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
+++|++++.||.|++||+.+..
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCCEEEEEecCCEEEEecCCCCC
Confidence 8999999999999999998863
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=1.7e-25 Score=162.31 Aligned_cols=151 Identities=15% Similarity=0.152 Sum_probs=127.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEE--EeCCCEEEEecCCCeEEEEEeCCcccccc----
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVL--MKNGRKVVCGSQSGTVLLYSWGYFKDCSD---- 74 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~---- 74 (188)
++|+|++++|++++.|+.|++||+.+++.+. +..|...|.+++| +|++++|++++.|+.|++||++.. ..+.
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~ 169 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS-NPMMVLQL 169 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS-SCSEEEEC
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC-cEEEEEec
Confidence 4799999999999999999999999988765 4569999999999 889999999999999999998642 1111
Q ss_pred --------------------------------------------------------------------------------
Q 029743 75 -------------------------------------------------------------------------------- 74 (188)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (188)
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 170 PERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred CCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence
Q ss_pred ------eeeeccCC------------ceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCC
Q 029743 75 ------RFVGLSPN------------SVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR 135 (188)
Q Consensus 75 ------~~~~~~~~------------~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 135 (188)
.+.. |.. .+.++ |+|++++|++++.||.|++||+++++++..+..|.. +|.+++|+|++
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~s~~g 327 (368)
T 3mmy_A 250 PAKDNFTFKC-HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ-PISACCFNHNG 327 (368)
T ss_dssp HHHHSEEEEC-SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS-CEEEEEECTTS
T ss_pred ccccceeeee-eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC-CceEEEECCCC
Confidence 1122 222 58888 899999999999999999999999999999998866 89999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCc
Q 029743 136 KFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~ 155 (188)
++|++++.|+..+.|++.+.
T Consensus 328 ~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 328 NIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp SCEEEEECCCSTTCGGGCCT
T ss_pred CeEEEEecccccccccccCC
Confidence 99999999886666665443
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=8.2e-25 Score=160.90 Aligned_cols=152 Identities=16% Similarity=0.226 Sum_probs=130.4
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeeec-------------ccccceEEEEEEe-CCCEEEEecCCCeEEEEE
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-------------FSEEELTSVVLMK-NGRKVVCGSQSGTVLLYS 65 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d 65 (188)
++|+| ++++|++++.|+.|++|++.++.....+. +|...|.+++|+| ++++|++++.|+.|++||
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 128 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWD 128 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEee
Confidence 57999 99999999999999999999876544432 5899999999999 778999999999999999
Q ss_pred eCCcccccceeeeccCCceeEE-eec---CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC-EEEE
Q 029743 66 WGYFKDCSDRFVGLSPNSVDAL-LKL---DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGS 140 (188)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~v~~~-~~~---~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 140 (188)
+.. +.....+. +...+.++ ++| ++.++++++.++.|++||+++++.+..+..|.. .|.+++|+|+++ .|++
T Consensus 129 ~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ll~~ 204 (408)
T 4a11_B 129 TNT-LQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-EILAVSWSPRYDYILAT 204 (408)
T ss_dssp TTT-TEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-CEEEEEECSSCTTEEEE
T ss_pred CCC-Cccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-cEEEEEECCCCCcEEEE
Confidence 986 45555554 56677777 655 566999999999999999999999999998866 899999999998 4889
Q ss_pred EeCCCcEEEEeCCCcc
Q 029743 141 ISHDSMLKLWDLDDIL 156 (188)
Q Consensus 141 ~~~d~~i~iwd~~~~~ 156 (188)
++.|+.|++||+++..
T Consensus 205 ~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 205 ASADSRVKLWDVRRAS 220 (408)
T ss_dssp EETTSCEEEEETTCSS
T ss_pred EcCCCcEEEEECCCCC
Confidence 9999999999998754
No 105
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=3.3e-25 Score=162.90 Aligned_cols=155 Identities=13% Similarity=0.155 Sum_probs=131.9
Q ss_pred Ceeecc----c---CeEEEEeCCCcEEEEEcCCCce-----eeeeccc-----ccceEEEEEE----eCCCE-EEEecCC
Q 029743 1 MTFAAD----A---MKLLGTSGDGTLSVCNLRKNTV-----QTRSEFS-----EEELTSVVLM----KNGRK-VVCGSQS 58 (188)
Q Consensus 1 l~~s~~----~---~~l~~~~~d~~i~i~~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d 58 (188)
++|+|+ + ++|++++.|+.|++|++.+++. ...+..| ...|.+++|+ |+++. |++++.|
T Consensus 68 ~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d 147 (397)
T 1sq9_A 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 147 (397)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT
T ss_pred EEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC
Confidence 468888 9 9999999999999999998876 7777778 5899999999 99999 9999999
Q ss_pred CeEEEEEeCCc-----ccccc-----ee-------eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeeccc
Q 029743 59 GTVLLYSWGYF-----KDCSD-----RF-------VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (188)
Q Consensus 59 ~~i~~~d~~~~-----~~~~~-----~~-------~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~ 120 (188)
+.|++||+... ...+. .+ .. |...+.++ |+|++ ++++++.++.|++||+++++++..+..
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT-PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS-SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEeCCccccccccceeeccCcceeeeeeccccC-CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEec
Confidence 99999999750 23444 44 34 67889999 89999 999999999999999999999988887
Q ss_pred ---C---CCcceeEEEeeCCCCEEEEEeCC---CcEEEEeCCCccCC
Q 029743 121 ---H---SEYPIESLALSHDRKFLGSISHD---SMLKLWDLDDILKG 158 (188)
Q Consensus 121 ---~---~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~ 158 (188)
| .. .|.+++|+|++++|++++.| +.|++||+++....
T Consensus 226 ~~~h~~~~~-~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 226 QHSMINNSN-SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp CC---CCCC-CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred cccccccCC-ccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 6 66 89999999999999999999 99999999876543
No 106
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=2.6e-24 Score=153.54 Aligned_cols=152 Identities=17% Similarity=0.248 Sum_probs=129.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
|+||+++ +|++| .|++|+|||+.+++++..+. +|...|.+++|+|++++|++|+.|+.|++|++.. ++++..+.+
T Consensus 31 l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-~~~~~~~~~ 107 (318)
T 4ggc_A 31 VDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-QKRLRNMTS 107 (318)
T ss_dssp EEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEEC
T ss_pred EEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC-ceeEEEecC
Confidence 4789875 66665 58999999999998877665 6778899999999999999999999999999986 577888888
Q ss_pred ccCCceeEEeecCCCEEEEecCCCeEEEEecccC-eeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPN-RIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
|...+.++ ++++..+++++.++.+++|+.... ..+..+.+|.. .+..+.+++++++|++++.|+.|++||+++...
T Consensus 108 -h~~~~~~~-~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 108 -HSARVGSL-SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ-EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp -CSSCEEEE-EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred -ccceEEEe-ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC-ceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 87766554 566789999999999999998765 45566778866 899999999999999999999999999987654
Q ss_pred C
Q 029743 158 G 158 (188)
Q Consensus 158 ~ 158 (188)
.
T Consensus 185 ~ 185 (318)
T 4ggc_A 185 G 185 (318)
T ss_dssp B
T ss_pred c
Confidence 3
No 107
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=1.5e-24 Score=156.08 Aligned_cols=156 Identities=19% Similarity=0.231 Sum_probs=137.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++++|++++.|+.|++|+............+...+..+.++++++.|++++.|+.+++||+...........+ |
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~-~ 170 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDES-H 170 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSS-C
T ss_pred EEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEecc-c
Confidence 479999999999999999999999998888777788889999999999999999999999999998754444444566 7
Q ss_pred CCceeEE-eecC--CCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLD--EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~--~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
...+..+ ++++ ..++++++.|+.|++||+++++++..+.+|.. +|++++|+|++++|++++.|+.|++||+++...
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 8888888 6654 46788999999999999999999999999976 899999999999999999999999999998654
Q ss_pred C
Q 029743 158 G 158 (188)
Q Consensus 158 ~ 158 (188)
.
T Consensus 250 ~ 250 (340)
T 4aow_A 250 L 250 (340)
T ss_dssp E
T ss_pred e
Confidence 3
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=2.3e-24 Score=161.62 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=134.2
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (188)
+++++++++++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++.+++++.|+.|++||+++ +.++..+.+ |.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~-h~ 352 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMYTLQG-HT 352 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECC-CS
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEEEEeC-CC
Confidence 4578899999999999999999999999999999999999999999999999999999999999986 578888888 99
Q ss_pred CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCCC
Q 029743 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (188)
..+.++ ++ +.++++++.||.|++||++++.....+... . .+..++|++++++|++++ |+.|++||++++....
T Consensus 353 ~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 353 ALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHT-N-LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECT-T-CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCC-C-CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 999988 55 689999999999999999988766655432 3 678889999999999988 8999999999877543
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.1e-24 Score=157.04 Aligned_cols=147 Identities=18% Similarity=0.170 Sum_probs=125.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc---eeeeecccccceEEEEEEeCCC-EEEEecCCCeEEEEEe-CCcccccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT---VQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSW-GYFKDCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~-~~~~~~~~~ 75 (188)
++|+|++++|++++.|+.|++|++..+. ....+..|...|.+++|+|+++ +|++++.|+.|++||+ ... .. ..
T Consensus 17 ~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~-~~ 94 (342)
T 1yfq_A 17 IKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP-SF-QA 94 (342)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS-SE-EE
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC-ce-Ee
Confidence 4799999999999999999999998876 3345558999999999999999 9999999999999999 753 22 23
Q ss_pred eeec-cCCceeEE-eecCCCEEEEecCCCeEEEEeccc---------CeeeeecccCCCcceeEEEeeCCCCEEEEEeCC
Q 029743 76 FVGL-SPNSVDAL-LKLDEDRVITGSENGLISLVGILP---------NRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (188)
Q Consensus 76 ~~~~-~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 144 (188)
+.+. |...+.++ |+| +.++++++.|+.|++||+++ ++++..+. +.. .|.+++|+|++ +++++.|
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN-KIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-CEEEEEECSSE--EEEEEST
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-ceEEEEecCCc--EEEEeCC
Confidence 3210 66789999 899 99999999999999999998 77777776 545 89999999887 8899999
Q ss_pred CcEEEEeCCC
Q 029743 145 SMLKLWDLDD 154 (188)
Q Consensus 145 ~~i~iwd~~~ 154 (188)
+.|++||+++
T Consensus 170 ~~i~i~d~~~ 179 (342)
T 1yfq_A 170 SQVQWFRLPL 179 (342)
T ss_dssp TEEEEEESSC
T ss_pred CeEEEEECCc
Confidence 9999999987
No 110
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.6e-24 Score=151.45 Aligned_cols=148 Identities=18% Similarity=0.198 Sum_probs=130.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc--ccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF--KDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~--~~~~~~~~~ 78 (188)
++| |++++|++++.|+.|++||+.++.....+..|...|.+++|+|++++|++++.|+.+++|++... ......+.+
T Consensus 24 ~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 24 VVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp EEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred EEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 357 89999999999999999999999888888899999999999999999999999999999998653 245667778
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeC-CCCEEEEEeCCCcEEEEeCCCc
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH-DRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
|...+.++ + +++++++++.|+.|++|| .+.....+..|.. .+.+++|.| ++.++++++.|+.|++||....
T Consensus 103 -~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 175 (313)
T 3odt_A 103 -HQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA-SVWDAKVVSFSENKFLTASADKTIKLWQNDKV 175 (313)
T ss_dssp -CSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS-CEEEEEEEETTTTEEEEEETTSCEEEEETTEE
T ss_pred -cccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC-ceeEEEEccCCCCEEEEEECCCCEEEEecCce
Confidence 88999988 5 678999999999999999 6777788888866 899999998 8999999999999999995544
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=3.4e-24 Score=177.05 Aligned_cols=154 Identities=18% Similarity=0.280 Sum_probs=136.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++..+++++.|+.|++||+.. +.+...+.+
T Consensus 663 ~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~~~~~~ 741 (1249)
T 3sfz_A 663 CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-KECRNTMFG 741 (1249)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-SSEEEEECC
T ss_pred EEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-cchhheecC
Confidence 47999999999999999999999999999999999999999999999 556899999999999999986 577788888
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecc--------------------------------------
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA-------------------------------------- 119 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~-------------------------------------- 119 (188)
|...+.++ |+|+++++++++.||.|++||++++.....+.
T Consensus 742 -h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 742 -HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp -CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred -CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 99999999 89999999999999999999998765433221
Q ss_pred -----------------cCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 120 -----------------EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 120 -----------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
+|.. .|.+++|+|+++++++++.|+.|++||+.+...
T Consensus 821 v~~~d~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~ 874 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHHS-TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK 874 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSSS-CCCEEEECSSTTEEEEECSSSCEEEEETTTTEE
T ss_pred EEEEEecCCCceeEEcCCCCC-ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 3433 788999999999999999999999999987653
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.6e-24 Score=162.45 Aligned_cols=145 Identities=16% Similarity=0.182 Sum_probs=121.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCce-------eeee----cccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV-------QTRS----EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 69 (188)
++|||||++|++|+.||+|++|++..+.. +..+ .+|...|.+++|+|+| +++++.|+.|++|++...
T Consensus 135 vafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 135 FEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp EEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCC
Confidence 58999999999999999999999998752 4555 5678899999999999 888899999999999753
Q ss_pred cc--ccceee-eccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEe--eCCCCEEEEEeC
Q 029743 70 KD--CSDRFV-GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLAL--SHDRKFLGSISH 143 (188)
Q Consensus 70 ~~--~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~ 143 (188)
.. ..+.+. + |...|.++ |+ |+++++++ ++.|++||+.+++......+|.. .|+.++| +|++..|++++.
T Consensus 213 ~~~~~~~tL~~~-h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~-~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 213 SHQPVSRMIQNA-SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLE-NFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp SSCCCEEEEECC-CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCS-CCCEEEETTCSSCEEEEECSS
T ss_pred ccccceeeeccc-ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCc-eEEEEEeeeCCCCCEEEEEcC
Confidence 21 123464 6 77889999 78 68999887 58999999998877433336766 8999999 999999999999
Q ss_pred CCcEEEEeCC
Q 029743 144 DSMLKLWDLD 153 (188)
Q Consensus 144 d~~i~iwd~~ 153 (188)
+|+ ++|..+
T Consensus 288 dG~-klw~~d 296 (588)
T 2j04_A 288 TSY-KVLLED 296 (588)
T ss_dssp CEE-EEEESS
T ss_pred CCC-EEEeec
Confidence 999 999986
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.92 E-value=9.3e-24 Score=157.77 Aligned_cols=147 Identities=18% Similarity=0.270 Sum_probs=128.4
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (188)
++++++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+ ++.+++++.|+.|++||+.. +..+..+.+ |.
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~-h~ 199 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET-GECIHTLYG-HT 199 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT-TEEEEEECC-CS
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc-CcEEEEECC-CC
Confidence 467789999999999999999999999999999999999999997 67999999999999999976 577778888 88
Q ss_pred CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
..+.++ ++ ++++++++.|+.|++||+++++++..+.+|.. .|.+++| ++.++++++.|+.|++||+++...
T Consensus 200 ~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 200 STVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-AVRCVQY--DGRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSS-CEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE
T ss_pred CcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-cEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE
Confidence 888888 53 67899999999999999999988888888866 7888888 678899999999999999877553
No 114
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=1.3e-23 Score=156.66 Aligned_cols=148 Identities=16% Similarity=0.227 Sum_probs=131.0
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (188)
++++++++|++|+.|+.|++||+.+++....+.+|...|.+++| +++.|++|+.||.|++||+.+ +..+..+.+ |.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~-~~~~~~~~~-h~ 213 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT-GEMLNTLIH-HC 213 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS-CCEEEEECC-CC
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC-CcEEEEEcC-CC
Confidence 46678999999999999999999999999999999999999998 789999999999999999986 577888888 99
Q ss_pred CceeEE-eecCCCEEEEecCCCeEEEEecccCeee---eecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRII---QPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
..+.++ ++ +.++++++.|+.|++||++++... ..+.+|.. .|.+++| ++++|++++.|+.|++||+++...
T Consensus 214 ~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 214 EAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp SCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-CEEEEEE--ETTEEEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC-cEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE
Confidence 999999 55 469999999999999999887655 56677865 8999998 678999999999999999988654
Q ss_pred C
Q 029743 158 G 158 (188)
Q Consensus 158 ~ 158 (188)
.
T Consensus 289 ~ 289 (435)
T 1p22_A 289 V 289 (435)
T ss_dssp E
T ss_pred E
Confidence 3
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.92 E-value=2.5e-24 Score=155.24 Aligned_cols=154 Identities=18% Similarity=0.236 Sum_probs=129.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC---------CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC-cc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK---------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY-FK 70 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~ 70 (188)
++|+| +++|++++.|+.|++||+.. ++++..+. |...+.+++|+|++ +++++.++.|++||++. ..
T Consensus 107 l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp EEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTT
T ss_pred EEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccc
Confidence 46889 99999999999999999987 66666666 88999999999876 99999999999999976 33
Q ss_pred cccc-eeeeccCCceeEE-eec-CCCEEEEecCCCeEEEEecccC------eeeeecccCCC--------cceeEEEeeC
Q 029743 71 DCSD-RFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPN------RIIQPIAEHSE--------YPIESLALSH 133 (188)
Q Consensus 71 ~~~~-~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~------~~~~~~~~~~~--------~~v~~~~~~~ 133 (188)
.... .... +...+.++ ++| +++++++++.+|.|++|+++.. +....+..|.. ..|.+++|+|
T Consensus 183 ~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 261 (342)
T 1yfq_A 183 DNGTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp CCCEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT
T ss_pred ccceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC
Confidence 3222 3334 67789999 899 9999999999999999999876 66667766632 2799999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCccCCC
Q 029743 134 DRKFLGSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 134 ~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (188)
++++|++++.|+.|++||+.+.....
T Consensus 262 ~~~~l~~~~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 262 RHKFLYTAGSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEecCCceEEEEcCccHhHhh
Confidence 99999999999999999999776433
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=1.1e-23 Score=156.37 Aligned_cols=154 Identities=13% Similarity=0.201 Sum_probs=133.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
|+|+|+|++|++|+.|+.|++||+.+++.+..+.+|...+.++.+ ++..|++++.|+.+++||.......+..+.+ |
T Consensus 153 v~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~-h 229 (420)
T 4gga_A 153 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSG-H 229 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-C
T ss_pred EEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecc-c
Confidence 579999999999999999999999999999999999999998877 5789999999999999999876677778888 9
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCe----eeeecccCCCcceeEEEeeCCCC-EEEE--EeCCCcEEEEeC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNR----IIQPIAEHSEYPIESLALSHDRK-FLGS--ISHDSMLKLWDL 152 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~d~~i~iwd~ 152 (188)
...+..+ ++|+++++++++.|+.+++|+..+++ .+.....|.. .|.+++|+|.+. .+++ ++.|+.|++||+
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~-~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS-CEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC-ceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 9999999 79999999999999999999998765 3445566655 899999999765 4444 457999999999
Q ss_pred CCccCC
Q 029743 153 DDILKG 158 (188)
Q Consensus 153 ~~~~~~ 158 (188)
.+....
T Consensus 309 ~t~~~~ 314 (420)
T 4gga_A 309 CSGACL 314 (420)
T ss_dssp TTTEEE
T ss_pred Cccccc
Confidence 987643
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=7.1e-24 Score=154.40 Aligned_cols=152 Identities=14% Similarity=0.121 Sum_probs=120.4
Q ss_pred eeecccCeEEE--EeCCCcEEEEEcCCCc----------------eeeeecccccceEEEEEEeCCCEEEEecCCCe-EE
Q 029743 2 TFAADAMKLLG--TSGDGTLSVCNLRKNT----------------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT-VL 62 (188)
Q Consensus 2 ~~s~~~~~l~~--~~~d~~i~i~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~ 62 (188)
++++ +++++ |+.+|.|++||+.++. .+..+.+|...|.+++|+|++++|++++.|++ |+
T Consensus 144 ~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~ 221 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIR 221 (355)
T ss_dssp EEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEE
T ss_pred EEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEE
Confidence 3455 45665 5789999999998765 25778899999999999999999999999998 99
Q ss_pred EEEeCCcccccceee-eccCCceeEE-eecCCCEEEEecCCCeEEEEecccCee--eeec--------------------
Q 029743 63 LYSWGYFKDCSDRFV-GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI--IQPI-------------------- 118 (188)
Q Consensus 63 ~~d~~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~-------------------- 118 (188)
+||+++ +.++..+. +.|...+.++ |+|++++|++++.|+.|++||++.+.. ...+
T Consensus 222 iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (355)
T 3vu4_A 222 VFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKL 300 (355)
T ss_dssp EEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEEC
T ss_pred EEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEe
Confidence 999986 56777776 2277889999 899999999999999999999975431 1111
Q ss_pred ccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 119 AEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 119 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
......+...++|+++++.|++++.||.+++|++....
T Consensus 301 ~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 301 SVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 11111134678999999999999999999999987654
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=2.5e-24 Score=158.79 Aligned_cols=156 Identities=12% Similarity=0.163 Sum_probs=109.9
Q ss_pred Ceeec--------ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCC-CEEEEecCCCeEEEEEeCCccc
Q 029743 1 MTFAA--------DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKD 71 (188)
Q Consensus 1 l~~s~--------~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~ 71 (188)
++|+| ++++|++++.|++|+|||+.++..+..+..|...+.+++|+|++ ++|++++.|++|++||+.....
T Consensus 142 v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 142 IDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp EEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-
T ss_pred EEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcc
Confidence 46776 89999999999999999999888877788899999999999987 5899999999999999975321
Q ss_pred ccc------------------------eeeeccCCceeEE-e-ecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcc
Q 029743 72 CSD------------------------RFVGLSPNSVDAL-L-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYP 125 (188)
Q Consensus 72 ~~~------------------------~~~~~~~~~v~~~-~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~ 125 (188)
... ...+ |...+.++ | .|+++.+++++.|+.+++||+..+.....+..+.. .
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~-~ 299 (393)
T 4gq1_A 222 AEENSQTELVKNPWLLTLNTLPLVNTCHSSG-IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTM-K 299 (393)
T ss_dssp ---------CSCCCSEEEESGGGC------C-CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------
T ss_pred cccccccCCcccceEEecccccceeeeeccc-ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecC-c
Confidence 111 1134 56677788 6 48999999999999999999987765555444322 2
Q ss_pred eeE------------------EEeeC--CCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 126 IES------------------LALSH--DRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 126 v~~------------------~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
+.. ..|+| ++.++++++.|+.|++||+.+....
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 222 23333 3446678889999999999876543
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=4.3e-24 Score=159.26 Aligned_cols=147 Identities=22% Similarity=0.334 Sum_probs=126.3
Q ss_pred ecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCc
Q 029743 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNS 83 (188)
Q Consensus 4 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 83 (188)
..+++++++|+.|+.|++||+.+++.+..+.+|...|.++.+ +++.+++++.|+.|++||+++ +.++..+.+ |...
T Consensus 263 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~-h~~~ 338 (435)
T 1p22_A 263 DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-GACLRVLEG-HEEL 338 (435)
T ss_dssp EEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTT-CCEEEEECC-CSSC
T ss_pred EeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCC-CCEEEEEeC-CcCc
Confidence 347899999999999999999999999999999999999998 478999999999999999986 577888888 9999
Q ss_pred eeEEeecCCCEEEEecCCCeEEEEecccCe---------eeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 84 VDALLKLDEDRVITGSENGLISLVGILPNR---------IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 84 v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
+.++.. ++.++++|+.||.|++||++++. ++..+.+|.+ .|.+++| ++.+|++++.||.|++||+.+
T Consensus 339 v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 339 VRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-RVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS-CCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred EEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC-CeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 999832 78999999999999999998766 7788888866 8999999 788999999999999999987
Q ss_pred ccCC
Q 029743 155 ILKG 158 (188)
Q Consensus 155 ~~~~ 158 (188)
....
T Consensus 415 ~~~~ 418 (435)
T 1p22_A 415 DPAA 418 (435)
T ss_dssp ----
T ss_pred CCCc
Confidence 6543
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=6.2e-23 Score=146.57 Aligned_cols=141 Identities=8% Similarity=-0.021 Sum_probs=109.9
Q ss_pred CCcEEEEEc-CCCceeeeecccccceEEEEEEe---CCCEEEEecCCCeEEEEEeCCcccccceeeeccCC---ceeEE-
Q 029743 16 DGTLSVCNL-RKNTVQTRSEFSEEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN---SVDAL- 87 (188)
Q Consensus 16 d~~i~i~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---~v~~~- 87 (188)
|+.|++|++ .+++.+..+..|...+..++|+| ++..|++++.|++|++||+.+ +++++++.+ |.. .+.++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T-Gk~l~tL~g-~~~~v~~v~~va 233 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT-GQLLKKMHI-DDSYQASVCHKA 233 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT-CCEEEEEEC-CC---CCCEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC-CcEEEEEcC-CCcceeeeEEEE
Confidence 889999999 45788788888999999999999 679999999999999999987 678888876 443 45555
Q ss_pred eecCCCEE------------EEecCCCeEEEEecccCeeeeec-----ccCCCcceeEEEeeCCCCEEEEEeCCCcEEEE
Q 029743 88 LKLDEDRV------------ITGSENGLISLVGILPNRIIQPI-----AEHSEYPIESLALSHDRKFLGSISHDSMLKLW 150 (188)
Q Consensus 88 ~~~~~~~l------------~~~~~d~~v~~~d~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 150 (188)
|+|+|.++ ++|+.|++|++||..+++.+..+ .+|.. .+.+..+ ++..+++++.|++|+||
T Consensus 234 fSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~-~~lsg~~--sg~~lASgS~DgTIkIW 310 (356)
T 2w18_A 234 YSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG-RFLEGDV--KDHCAAAILTSGTIAIW 310 (356)
T ss_dssp EEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC-CEEEEEE--ETTEEEEEETTSCEEEE
T ss_pred ECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc-eeEcccc--CCCEEEEEcCCCcEEEE
Confidence 89999876 56778999999999999877654 35543 3433334 47889999999999999
Q ss_pred eCCCccCCCCC
Q 029743 151 DLDDILKGSGN 161 (188)
Q Consensus 151 d~~~~~~~~~~ 161 (188)
|+.+++....+
T Consensus 311 Dl~tGk~l~tL 321 (356)
T 2w18_A 311 DLLLGQCTALL 321 (356)
T ss_dssp ETTTCSEEEEE
T ss_pred ECCCCcEEEEe
Confidence 99998755543
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.91 E-value=1.8e-22 Score=150.78 Aligned_cols=145 Identities=19% Similarity=0.259 Sum_probs=129.4
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCcee
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVD 85 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 85 (188)
+++++++++.|+.|++||+.+++.+..+.+|...|.++.|+ ++.+++++.|+.|++||+.. +..+..+.+ |...+.
T Consensus 168 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~-~~~~v~ 243 (445)
T 2ovr_B 168 RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET-GQCLHVLMG-HVAAVR 243 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS-CCEEEEEEC-CSSCEE
T ss_pred cCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC-CcEEEEEcC-CcccEE
Confidence 36799999999999999999999999999999999999995 67899999999999999986 577778888 999999
Q ss_pred EEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 86 ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 86 ~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
++.. +++++++++.|+.|++||+++++++..+.+|.. .|.+++| ++.++++++.|+.|++||+++....
T Consensus 244 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 244 CVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN-RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp EEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS-CEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC-ceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 8822 788999999999999999999999999998866 8999998 7889999999999999999876543
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3.4e-23 Score=154.53 Aligned_cols=152 Identities=9% Similarity=0.001 Sum_probs=121.1
Q ss_pred CeeecccCeEE----EEeCCCcEEEEEcCCC--------c---eeeeecccccceEEEEEEeC-CCEEEEecCCCeEEEE
Q 029743 1 MTFAADAMKLL----GTSGDGTLSVCNLRKN--------T---VQTRSEFSEEELTSVVLMKN-GRKVVCGSQSGTVLLY 64 (188)
Q Consensus 1 l~~s~~~~~l~----~~~~d~~i~i~~~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~ 64 (188)
++|+|++++|+ +++.|+.|+|||+.++ + ....+.+|...|.+++|+|+ +++|++++.|++|++|
T Consensus 98 l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 47999999999 7888999999998654 1 13455679999999999997 7899999999999999
Q ss_pred EeCCcccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCC------CcceeEEEeeCCCCE
Q 029743 65 SWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS------EYPIESLALSHDRKF 137 (188)
Q Consensus 65 d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~ 137 (188)
|++.. .......+ |...+.++ |+|+|++|++|+.||.|++||++ ++....+..+. ...|.+++|++++.+
T Consensus 178 D~~~~-~~~~~~~~-~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 178 QVTET-VKVCATLP-STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EESSS-EEEEEEEC-GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EcCCC-cceeeccC-CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99864 44445566 78889999 89999999999999999999998 55444443321 126899999999887
Q ss_pred EEEEe-CCC------cEEEEeCCCc
Q 029743 138 LGSIS-HDS------MLKLWDLDDI 155 (188)
Q Consensus 138 l~~~~-~d~------~i~iwd~~~~ 155 (188)
+++.+ .+| .+++|++.+.
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEccCCCccCCCCceEEEEeccC
Confidence 75433 443 3899999865
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.3e-23 Score=156.83 Aligned_cols=150 Identities=8% Similarity=0.050 Sum_probs=120.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCC----------ceeee-----ecccccceEEEEEEeCCCEEE----EecCCCeE
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKN----------TVQTR-----SEFSEEELTSVVLMKNGRKVV----CGSQSGTV 61 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~----------~~~~~-----~~~~~~~v~~~~~~~~~~~l~----~~~~d~~i 61 (188)
|++++++.++++++.++ +++|+.... ..+.. ...+...|.+++|+|++++|+ +++.|+.|
T Consensus 42 lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v 120 (434)
T 2oit_A 42 LAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSII 120 (434)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEE
T ss_pred EEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceE
Confidence 47899999999998887 888875310 01110 112556799999999999999 78889999
Q ss_pred EEEEeCCc-----c--cc---cceeeeccCCceeEE-eecC-CCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEE
Q 029743 62 LLYSWGYF-----K--DC---SDRFVGLSPNSVDAL-LKLD-EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESL 129 (188)
Q Consensus 62 ~~~d~~~~-----~--~~---~~~~~~~~~~~v~~~-~~~~-~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~ 129 (188)
++||+... . +. ...+.+ |...+.++ |+|+ +.+|++++.||.|++||++++.......+|.. .|.++
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~-~v~~v 198 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV-AVTSV 198 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG-CEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC-ceeEE
Confidence 99998642 0 11 344566 88899999 8997 88999999999999999998877666666655 89999
Q ss_pred EeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 130 ALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 130 ~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
+|+|+|++|++++.|+.|++||++
T Consensus 199 ~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 199 CWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EECTTSSCEEEEETTSCEEEECTT
T ss_pred EEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999999999999999999998
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.90 E-value=3e-22 Score=148.79 Aligned_cols=153 Identities=13% Similarity=0.051 Sum_probs=131.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceee-----eecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-----RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
++|+|+++++++++.++.|++||+.+++... .+.+|...|.+++|+|+++.+++++.++.|++||++. +..+..
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~-~~~~~~ 206 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT-LAYKAT 206 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT-CCEEEE
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC-ceEEEE
Confidence 5789977778888888999999999988776 3457888999999999999999999999999999976 566677
Q ss_pred eeeccCCceeEE-eecCCCEEE-EecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe--------CCC
Q 029743 76 FVGLSPNSVDAL-LKLDEDRVI-TGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS--------HDS 145 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~ 145 (188)
+.. +...+.++ ++|++++++ +++.++.|++||+++++.+..+..+ . .+.+++|+|++++|++++ .|+
T Consensus 207 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 207 VDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-G-LPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-S-EEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-C-CceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 777 88889999 899999885 5558999999999999988888765 4 589999999999998887 488
Q ss_pred cEEEEeCCCccC
Q 029743 146 MLKLWDLDDILK 157 (188)
Q Consensus 146 ~i~iwd~~~~~~ 157 (188)
.|++||+.+...
T Consensus 284 ~i~~~d~~~~~~ 295 (433)
T 3bws_A 284 RLGIYSMDKEKL 295 (433)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEECCCCcE
Confidence 999999987643
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.90 E-value=1.3e-21 Score=143.61 Aligned_cols=152 Identities=13% Similarity=0.150 Sum_probs=125.2
Q ss_pred CeeecccCeE-EEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEE-EecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|+++++ ++++.++.|++||+.+++.+..+..+. .+.+++|+|+++.|+ +++.++.|++||+.. ++.+..+..
T Consensus 37 ~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~-~~~~~~~~~ 114 (391)
T 1l0q_A 37 AVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS-NTVAGTVKT 114 (391)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCC-CeEEEEEeC
Confidence 4799999987 566689999999999999888877544 899999999999875 455679999999986 455555554
Q ss_pred ccCCceeEE-eecCCCEE-EEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE-EEEeCCCcEEEEeCCCc
Q 029743 79 LSPNSVDAL-LKLDEDRV-ITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISHDSMLKLWDLDDI 155 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~ 155 (188)
...+.++ |+|+++++ ++++.++.|++||+.+++.+..+..+. .+..++|+|++++| ++++.++.|++||+++.
T Consensus 115 --~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 115 --GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR--SPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp --SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred --CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC--CcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 4456777 89999977 688889999999999999888887763 57999999999887 56778899999999876
Q ss_pred cCC
Q 029743 156 LKG 158 (188)
Q Consensus 156 ~~~ 158 (188)
...
T Consensus 191 ~~~ 193 (391)
T 1l0q_A 191 SVI 193 (391)
T ss_dssp EEE
T ss_pred eEE
Confidence 543
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=2.9e-21 Score=141.71 Aligned_cols=151 Identities=17% Similarity=0.193 Sum_probs=125.6
Q ss_pred CeeecccCeE-EEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEE-EEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|++++| ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||++. +.....+.
T Consensus 121 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~- 197 (391)
T 1l0q_A 121 LALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK- 197 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-
Confidence 4789999987 67777999999999999888877754 567999999999887 5778889999999976 45555454
Q ss_pred ccCCceeEE-eecCCCEEEEec---CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE-EEEeCCCcEEEEeCC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGS---ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISHDSMLKLWDLD 153 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~ 153 (188)
+...+.++ ++|+++++++++ .++.|++||+++++.+..+..+. .+.+++|+|++++| ++++.|+.|++||+.
T Consensus 198 -~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 198 -VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP--DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp -CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS--SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred -cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC--CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 45567777 899999998887 68999999999999888887764 57899999999987 566789999999998
Q ss_pred CccC
Q 029743 154 DILK 157 (188)
Q Consensus 154 ~~~~ 157 (188)
+...
T Consensus 275 ~~~~ 278 (391)
T 1l0q_A 275 TNTI 278 (391)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 7653
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=1.7e-20 Score=139.34 Aligned_cols=152 Identities=15% Similarity=0.119 Sum_probs=120.3
Q ss_pred CeeecccCeEEEEeCCC---cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEE-EecCCC--eEEEEEeCCcccccc
Q 029743 1 MTFAADAMKLLGTSGDG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSG--TVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~~~d~~~~~~~~~ 74 (188)
++|||+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|+|+.|+ +++.++ .|++||+.. +. ..
T Consensus 184 ~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-~~-~~ 260 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IR 260 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CC-EE
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-CC-EE
Confidence 47999999999998875 9999999988775 4556788999999999999887 666555 499999875 23 35
Q ss_pred eeeeccCCceeEE-eecCCCEEEEecC-CC--eEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCC---CcE
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGSE-NG--LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD---SML 147 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~--~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i 147 (188)
.+.. +...+.++ |+|+|++|++++. ++ .|++||+.+++.. .+..+.. .+..++|+|+|++|++++.+ ..|
T Consensus 261 ~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~-~~~~~~~spdG~~l~~~~~~~g~~~i 337 (415)
T 2hqs_A 261 QVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHI 337 (415)
T ss_dssp ECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSS-EEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred eCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCC-cccCeEECCCCCEEEEEECcCCceEE
Confidence 6666 77788888 8999999888775 44 6888898877643 4444534 68899999999999888764 589
Q ss_pred EEEeCCCccCC
Q 029743 148 KLWDLDDILKG 158 (188)
Q Consensus 148 ~iwd~~~~~~~ 158 (188)
++||+.+....
T Consensus 338 ~~~d~~~~~~~ 348 (415)
T 2hqs_A 338 AKQDLATGGVQ 348 (415)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCCEE
Confidence 99999876543
No 128
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=9.8e-22 Score=143.66 Aligned_cols=109 Identities=16% Similarity=0.152 Sum_probs=94.9
Q ss_pred CeeecccCeEEEEeCCC----cEEEEEcCCCce----eeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc
Q 029743 1 MTFAADAMKLLGTSGDG----TLSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~----~i~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 72 (188)
++|+|+++++++++.++ .+++|++..... ...+.+|...|++++|+|+|++|++|+.|++|+|||+.+ +++
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~-~~~ 303 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD-LSM 303 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC-CcE
Confidence 47999999999998876 578888876543 345668899999999999999999999999999999987 466
Q ss_pred cce-eeeccCCceeEE-eecCCCEEEEecCCCeEEEEeccc
Q 029743 73 SDR-FVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP 111 (188)
Q Consensus 73 ~~~-~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~ 111 (188)
+.. +.+ |...|+++ |+|+|++|++++.|++|+||++..
T Consensus 304 ~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 304 SKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 655 478 99999999 999999999999999999999964
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=1.4e-20 Score=139.87 Aligned_cols=152 Identities=10% Similarity=0.058 Sum_probs=125.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEE-EecCCCeEEEEEeCCcccccceeeec
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVGL 79 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~ 79 (188)
++|+|+++++++++.++.|++||+.+++.+..+..|...+.+++|+|+++.++ +++.++.|++||++. +..+..+..
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~- 252 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-KLEIRKTDK- 252 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEECCC-
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-CcEEEEecC-
Confidence 36889999999999999999999999988888888889999999999998885 555799999999976 455555554
Q ss_pred cCCceeEE-eecCCCEEEEec--------CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE-EEEeCCCcEEE
Q 029743 80 SPNSVDAL-LKLDEDRVITGS--------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL-GSISHDSMLKL 149 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~--------~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i 149 (188)
...+.++ ++|+++++++++ .|+.|++||+++++.+..+. +.. .+.+++|+|+++.+ ++++.++.|++
T Consensus 253 -~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 253 -IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPG-NKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp -CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEE-CEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred -CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCC-CcceEEECCCCCEEEEEecCCCEEEE
Confidence 3457777 899999999887 48899999999988776663 323 68899999999765 56688999999
Q ss_pred EeCCCccC
Q 029743 150 WDLDDILK 157 (188)
Q Consensus 150 wd~~~~~~ 157 (188)
||+.+...
T Consensus 330 ~d~~~~~~ 337 (433)
T 3bws_A 330 YDLKEKKV 337 (433)
T ss_dssp EETTTTEE
T ss_pred EECCCCcE
Confidence 99987654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=1.2e-19 Score=134.81 Aligned_cols=151 Identities=17% Similarity=0.155 Sum_probs=117.1
Q ss_pred CeeecccCeEE-EEeCCC--cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC-CC--eEEEEEeCCcccccc
Q 029743 1 MTFAADAMKLL-GTSGDG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SG--TVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~~~~l~-~~~~d~--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~ 74 (188)
++|+|||++|+ +++.++ .|++||+.+++. ..+..|...+.+++|+|+|+.|++++. ++ .|.+||+.. ....
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~--~~~~ 304 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING--GAPQ 304 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCCE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC--CCEE
Confidence 47999999888 555555 499999988776 456678889999999999998888775 44 677778764 2344
Q ss_pred eeeeccCCceeEE-eecCCCEEEEecCC---CeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCC---cE
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGSEN---GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDS---ML 147 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~~d---~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i 147 (188)
.+.. +...+.++ |+|+|++|++++.+ ..|++||+.+++.. .+..+ . .+.+++|+|+|++|++++.++ .|
T Consensus 305 ~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 305 RITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVL 380 (415)
T ss_dssp ECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEE
T ss_pred EEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEE
Confidence 4555 66677777 89999999888754 58999999988764 45555 3 689999999999999888776 79
Q ss_pred EEEeCCCccCC
Q 029743 148 KLWDLDDILKG 158 (188)
Q Consensus 148 ~iwd~~~~~~~ 158 (188)
++||+......
T Consensus 381 ~~~d~~g~~~~ 391 (415)
T 2hqs_A 381 NLVSTDGRFKA 391 (415)
T ss_dssp EEEETTSCCEE
T ss_pred EEEECCCCcEE
Confidence 99999865443
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=1.7e-19 Score=142.29 Aligned_cols=141 Identities=11% Similarity=0.073 Sum_probs=111.6
Q ss_pred CeeecccCeEEEEeC-CC-----cEEEEEcCCCceeeeeccccc------------------------ceEEEEEEeCCC
Q 029743 1 MTFAADAMKLLGTSG-DG-----TLSVCNLRKNTVQTRSEFSEE------------------------ELTSVVLMKNGR 50 (188)
Q Consensus 1 l~~s~~~~~l~~~~~-d~-----~i~i~~~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~ 50 (188)
++|||||++|++++. ++ .|++||+.+++....+..+.. .+.+++|+|||+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 479999999999988 87 899999999887666654332 378999999999
Q ss_pred EEEEecCCCeEEEEEeCCccc--ccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCc---
Q 029743 51 KVVCGSQSGTVLLYSWGYFKD--CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEY--- 124 (188)
Q Consensus 51 ~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~--- 124 (188)
+|++++. +.|++||+.. +. ....+.. +...+..+ |+|||++|++++. +.|++||+.+++.......+...
T Consensus 122 ~l~~~~~-~~i~~~d~~~-~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQ-EGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEEET-TEEEEEESSS-CSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEEeC-CcEEEEECCC-CCcceEEEccc-CCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceec
Confidence 9998886 8999999975 31 4455666 77778888 8999999998874 58999999988776554433220
Q ss_pred ------------ceeEEEeeCCCCEEEEEeCCC
Q 029743 125 ------------PIESLALSHDRKFLGSISHDS 145 (188)
Q Consensus 125 ------------~v~~~~~~~~~~~l~~~~~d~ 145 (188)
.+..++|+|||++|++++.|+
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 147899999999999887665
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=1e-19 Score=143.13 Aligned_cols=140 Identities=14% Similarity=0.033 Sum_probs=107.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeeccccc---ceEEEEEEeCCCEEEEecCC---------CeEEEEEeCC
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGSQS---------GTVLLYSWGY 68 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~~~d~~~ 68 (188)
++|+|||+++++ +.|++|++||+.+++....+..|.. .+.+++|+|||++|++++.+ +.+.+||+..
T Consensus 22 ~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 100 (723)
T 1xfd_A 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (723)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred cEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC
Confidence 579999998776 7889999999999988777776654 49999999999999998764 7888999976
Q ss_pred cccccceeee--ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCc-----------------ceeE
Q 029743 69 FKDCSDRFVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEY-----------------PIES 128 (188)
Q Consensus 69 ~~~~~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~-----------------~v~~ 128 (188)
. .. ..+.. .+...+..+ |+|||++|+.++. +.|++||+.+++.......+... .+.+
T Consensus 101 ~-~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 101 G-DP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp C-CC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred C-ce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 3 33 33322 033346777 8999999998886 78999999988766554443220 1278
Q ss_pred EEeeCCCCEEEEEeCC
Q 029743 129 LALSHDRKFLGSISHD 144 (188)
Q Consensus 129 ~~~~~~~~~l~~~~~d 144 (188)
++|+|||++|++++.+
T Consensus 178 ~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred EEECCCCCEEEEEEEC
Confidence 9999999999988754
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=1.5e-18 Score=122.04 Aligned_cols=153 Identities=13% Similarity=0.046 Sum_probs=114.8
Q ss_pred CeeecccCeEEEEeC--CCcEEEE--EcCCCceeeeecccccceEEEEEEeCCCEEE-EecCCCeEEEEEeCCcccccce
Q 029743 1 MTFAADAMKLLGTSG--DGTLSVC--NLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~--d~~i~i~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
++|+|++++|++++. ++...|| +...+.. ..+..+ ..+..++|+|+++.|+ ++..++.+++|+++........
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 579999999999983 3445555 4455443 344433 3588999999999877 7788999999998643444555
Q ss_pred eeeccCCceeEE-eecCCCEEEEec-CCCeEEEEecc-cCeeeeecccCCCcceeEEEeeCCCCEEEEEeCC--------
Q 029743 76 FVGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGIL-PNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD-------- 144 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------- 144 (188)
+.. +...+.++ |+|+|+++++++ .++.+++|++. .+.....+..+.. .+..++|+|++++|++++.+
T Consensus 168 ~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 168 LTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY-GDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE-EEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ccc-CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc-ccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 666 67778888 899999887665 58889999886 4556667776644 78999999999999888765
Q ss_pred ---CcEEEEeCCCccC
Q 029743 145 ---SMLKLWDLDDILK 157 (188)
Q Consensus 145 ---~~i~iwd~~~~~~ 157 (188)
+.|++||+.+...
T Consensus 246 ~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SEEEEEEEEETTSCSC
T ss_pred cCceEEEEEecCCCCc
Confidence 5699999987654
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=1.3e-17 Score=120.48 Aligned_cols=154 Identities=11% Similarity=0.097 Sum_probs=120.3
Q ss_pred CeeecccCeEEEE-eCCCcEEEEEcCCCceeeeeccccc---------ceEEEEEEeCCCEEEEec--CCCeEEEEEeCC
Q 029743 1 MTFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEE---------ELTSVVLMKNGRKVVCGS--QSGTVLLYSWGY 68 (188)
Q Consensus 1 l~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~ 68 (188)
++|+|++++++++ ..++.|.+||..+++.+..+..+.. .+.+++|+|+++.+++++ .++.|.+||+..
T Consensus 94 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 94 ATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred EEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 4689999966555 4579999999999988777764332 278899999999887766 478899999976
Q ss_pred cccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeeccc----CCCcceeEEEeeCCCCEEEEEeC
Q 029743 69 FKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAE----HSEYPIESLALSHDRKFLGSISH 143 (188)
Q Consensus 69 ~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~ 143 (188)
+.....+.. +...+..+ ++|+|+++++++.++.|.+||+.+++.+..+.. +.. .+..++|+|+++++++++.
T Consensus 174 -~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 174 -IKLKTAIQN-TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEH-FFINISLDTARQRAFITDS 250 (353)
T ss_dssp -TEEEEEECC-CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCC-CEEEEEEETTTTEEEEEES
T ss_pred -CceEEEecC-CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCc-ccceEEECCCCCEEEEEeC
Confidence 455555653 44446666 899999999999999999999999988776654 322 5778999999998776654
Q ss_pred -CCcEEEEeCCCccC
Q 029743 144 -DSMLKLWDLDDILK 157 (188)
Q Consensus 144 -d~~i~iwd~~~~~~ 157 (188)
++.|.+||+.+...
T Consensus 251 ~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNI 265 (353)
T ss_dssp SSSEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCcE
Confidence 59999999987654
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=3e-18 Score=120.54 Aligned_cols=149 Identities=11% Similarity=0.071 Sum_probs=111.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC-Cceeeeeccc-ccceEEEEEEeCCCEEEEec--CCCeEEEEEeCCccccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK-NTVQTRSEFS-EEELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~ 76 (188)
++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|+++.|++++ .++...+|.++........+
T Consensus 47 ~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 47 PNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC
T ss_pred eEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe
Confidence 47999999999986 68999999998 8776666555 36789999999999999988 34556666664323344444
Q ss_pred eeccCCceeEE-eecCCCEEE-EecCCCeEEEEeccc-CeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeC
Q 029743 77 VGLSPNSVDAL-LKLDEDRVI-TGSENGLISLVGILP-NRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~-~~~~d~~v~~~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (188)
.. + ..+..+ |+|++++++ ++..++.+++|+++. +.....+..+.. .+.+++|+|++++|+.++ .++.+++|++
T Consensus 126 ~~-~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 126 TK-N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG-RNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp CS-S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS-CEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ec-C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC-ccccceECCCCCEEEEEecCCCCccEEEE
Confidence 43 3 346777 899999877 677889899998643 233445555544 799999999999887666 5889999987
Q ss_pred C
Q 029743 153 D 153 (188)
Q Consensus 153 ~ 153 (188)
.
T Consensus 203 ~ 203 (297)
T 2ojh_A 203 R 203 (297)
T ss_dssp E
T ss_pred C
Confidence 5
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=5.4e-18 Score=129.77 Aligned_cols=151 Identities=8% Similarity=0.049 Sum_probs=123.4
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEe--CCcccccceeeec
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSW--GYFKDCSDRFVGL 79 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~--~~~~~~~~~~~~~ 79 (188)
+|+|++.++++++.+++|.+||..+++++..+..+.. +..++|+|+|++|++++.++.|.+||+ .+ ...+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t-~~~~~~i~~- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKE-PTKVAEIKI- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSS-CEEEEEEEC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCC-CcEEEEEec-
Confidence 4788998999999999999999999999888873333 889999999999999999999999999 54 455666653
Q ss_pred cCCceeEE-eec----CCCEEEEec-CCCeEEEEecccCeeeeecccC----------CCcceeEEEeeCCCCEE-EEEe
Q 029743 80 SPNSVDAL-LKL----DEDRVITGS-ENGLISLVGILPNRIIQPIAEH----------SEYPIESLALSHDRKFL-GSIS 142 (188)
Q Consensus 80 ~~~~v~~~-~~~----~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l-~~~~ 142 (188)
...+..+ |+| +|+++++++ .++.|.+||..+++++..+..+ .+..+..+.++|+++.+ ++..
T Consensus 221 -g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 -GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred -CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 4456777 899 999999988 4899999999999988777542 22258899999977654 5666
Q ss_pred CCCcEEEEeCCCcc
Q 029743 143 HDSMLKLWDLDDIL 156 (188)
Q Consensus 143 ~d~~i~iwd~~~~~ 156 (188)
.++.|.+||+.+..
T Consensus 300 ~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 300 ETGKVLLVNYKDID 313 (543)
T ss_dssp TTTEEEEEECTTSS
T ss_pred CCCeEEEEEecCCC
Confidence 78999999998743
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=6.5e-18 Score=121.17 Aligned_cols=151 Identities=10% Similarity=0.013 Sum_probs=116.6
Q ss_pred CeeecccCeEEEEe------------CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC
Q 029743 1 MTFAADAMKLLGTS------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY 68 (188)
Q Consensus 1 l~~s~~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 68 (188)
++|+|+|++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.+||+..
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~ 163 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEA 163 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTT
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCC
Confidence 46899999998886 579999999998887776664 4567889999999988887 57899999864
Q ss_pred cccccceeee-----------------------------------------------------------------ccCCc
Q 029743 69 FKDCSDRFVG-----------------------------------------------------------------LSPNS 83 (188)
Q Consensus 69 ~~~~~~~~~~-----------------------------------------------------------------~~~~~ 83 (188)
. .....+.. .+...
T Consensus 164 ~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 242 (337)
T 1pby_B 164 G-TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242 (337)
T ss_dssp T-EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred C-cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCc
Confidence 2 22211110 01112
Q ss_pred eeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCCC
Q 029743 84 VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 84 v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (188)
+..+ ++|+|++++++ ++.|++||+.+++.+..+..+ . .+.+++|+|++++|++++.++.|.+||+.+.....
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-H-SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-S-CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-C-ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 3346 79999998888 689999999999888777654 3 57899999999999888899999999998876443
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=6.4e-18 Score=129.35 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=119.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEc--CCCceeeeecccccceEEEEEEe----CCCEEEEecC-CCeEEEEEeCCccccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNL--RKNTVQTRSEFSEEELTSVVLMK----NGRKVVCGSQ-SGTVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~~~d~~~~~~~~ 73 (188)
++|+|+|++|++++.++.|++||+ .+++.+..+. +...+..++|+| +|+++++++. +++|.+||..+ .+++
T Consensus 184 v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-~~~~ 261 (543)
T 1nir_A 184 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-LEPK 261 (543)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-CCEE
T ss_pred EEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-cccc
Confidence 469999999999999999999999 7888888877 456689999999 9999998885 89999999876 4666
Q ss_pred ceeeecc-----------CCceeEE-eecCCCE-EEEecCCCeEEEEecccCeeee--ecccCCCcceeEEEeeCCCCEE
Q 029743 74 DRFVGLS-----------PNSVDAL-LKLDEDR-VITGSENGLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 74 ~~~~~~~-----------~~~v~~~-~~~~~~~-l~~~~~d~~v~~~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l 138 (188)
+.+.. + ...+..+ ++|++.. +++...++.|.+||..+.+.+. .+. +.. .+.+++|+|++++|
T Consensus 262 ~~i~~-~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~-~~~~~~~spdg~~l 338 (543)
T 1nir_A 262 QIVST-RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAP-FLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEC-CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCS-SCCCEEECTTSCEE
T ss_pred eeecc-cCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCc-CccCceECCCCCEE
Confidence 65543 2 1256677 7887664 5666788999999998765433 333 323 58899999999987
Q ss_pred EEEe-CCCcEEEEeCCCccCC
Q 029743 139 GSIS-HDSMLKLWDLDDILKG 158 (188)
Q Consensus 139 ~~~~-~d~~i~iwd~~~~~~~ 158 (188)
++++ .+++|.+||+.+++..
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEE
T ss_pred EEEecCCCeEEEEECCCCeEE
Confidence 6554 6899999999987543
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=1.7e-17 Score=119.86 Aligned_cols=154 Identities=9% Similarity=0.044 Sum_probs=120.7
Q ss_pred CeeecccCeEEEEe--CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTS--GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|+++++++++ .++.|.+||..+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.. +.....+..
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-~~~~~~~~~ 224 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-NKILSRKKL 224 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-TEEEEEEEC
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-CeEEEEEEc
Confidence 47899999888776 478899999999988888775666688999999999999999999999999976 344444432
Q ss_pred ---ccCCceeEE-eecCCCEEEEec-CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeC
Q 029743 79 ---LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (188)
Q Consensus 79 ---~~~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (188)
.+...+..+ ++|+|+++++++ .++.|.+||+.+++.+..+.... ...++|+|++++++++. .++.|.+||+
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 023345666 899999777665 45899999999998887776542 35799999999766555 6899999999
Q ss_pred CCccCC
Q 029743 153 DDILKG 158 (188)
Q Consensus 153 ~~~~~~ 158 (188)
.+....
T Consensus 302 ~~~~~~ 307 (353)
T 3vgz_A 302 KSYKVV 307 (353)
T ss_dssp TTTEEE
T ss_pred CCCeEE
Confidence 876543
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=1.2e-17 Score=120.10 Aligned_cols=151 Identities=14% Similarity=0.201 Sum_probs=110.0
Q ss_pred CeeecccCeEEEEeCC-CcEEEEEcC--CCce--eeeecccccceEEEEEEeCCCEEEEecC-CCeEEEEEeCCc--ccc
Q 029743 1 MTFAADAMKLLGTSGD-GTLSVCNLR--KNTV--QTRSEFSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYF--KDC 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d-~~i~i~~~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~--~~~ 72 (188)
++|+|++++|++++.+ +.|.+|++. +++. +..+..+ ..+..++|+|++++|++++. ++.|.+||+... ...
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 4799999999988886 899999997 5543 3344433 37899999999998876654 889999999421 233
Q ss_pred cceeeeccCCceeEE-eecCCCEEEEec-CCCeEEEEeccc-Ceeee----ecccCCCcceeEEEeeCCCCEEEEEe-CC
Q 029743 73 SDRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLISLVGILP-NRIIQ----PIAEHSEYPIESLALSHDRKFLGSIS-HD 144 (188)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~~-~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~-~d 144 (188)
...+.. ...+.++ ++|+|+++++++ .++.|++||+.+ ++... .+..+.+..+..++|+|++++|++++ .+
T Consensus 122 ~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 122 VDVVEG--LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp EEEECC--CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cccccC--CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC
Confidence 333333 3346666 899999888777 889999999987 54322 22222233688899999999776554 78
Q ss_pred CcEEEEeCCC
Q 029743 145 SMLKLWDLDD 154 (188)
Q Consensus 145 ~~i~iwd~~~ 154 (188)
+.|.+|++..
T Consensus 200 ~~i~~~~~~~ 209 (343)
T 1ri6_A 200 SSVDVWELKD 209 (343)
T ss_dssp TEEEEEESSC
T ss_pred CEEEEEEecC
Confidence 9999999964
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.78 E-value=1.8e-18 Score=136.10 Aligned_cols=153 Identities=15% Similarity=0.096 Sum_probs=113.4
Q ss_pred CeeecccCeEEEEeCC---------CcEEEEEcCCCcee--eeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc
Q 029743 1 MTFAADAMKLLGTSGD---------GTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 69 (188)
++|||||++|++++.+ +.+++||+.+++.. .....|...+..++|+|||+.|+.++. +.|++||+..
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~- 143 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG- 143 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-
Confidence 4699999999999764 67889999988752 222244555889999999999998876 7899999875
Q ss_pred ccccceeeeccCCce------------------eEE-eecCCCEEEEecCCC----------------------------
Q 029743 70 KDCSDRFVGLSPNSV------------------DAL-LKLDEDRVITGSENG---------------------------- 102 (188)
Q Consensus 70 ~~~~~~~~~~~~~~v------------------~~~-~~~~~~~l~~~~~d~---------------------------- 102 (188)
+...+.... +...+ .++ |+|||++|++++.++
T Consensus 144 g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 144 KQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred CceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 344433332 33222 567 899999999887542
Q ss_pred ------eEEEEecccCeeeeecccCC-----CcceeEEEeeCCCCEEEEEeC----CCcEEEEeCCCcc
Q 029743 103 ------LISLVGILPNRIIQPIAEHS-----EYPIESLALSHDRKFLGSISH----DSMLKLWDLDDIL 156 (188)
Q Consensus 103 ------~v~~~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~ 156 (188)
.|++||+.+++....+..+. ...+..++|+|||++|++... +..|++||+.++.
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 79999998887655565431 236899999999998876643 3579999998765
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=5.6e-17 Score=116.40 Aligned_cols=148 Identities=12% Similarity=0.100 Sum_probs=113.5
Q ss_pred eeecccCe-EEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC-CCeEEEEEeCCcccc-cceeee
Q 029743 2 TFAADAMK-LLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDC-SDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~-l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~-~~~~~~ 78 (188)
.|.+++++ +++...++.|++||+.+++.+..+..+...+ .++|+|+++++++++. ++.|.+||+.. +.. ...+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL-EPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS-SSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC-CceeEEeccc
Confidence 35666555 5666778999999999998887777666667 9999999997766655 88999999976 344 556665
Q ss_pred ccCCceeEE-eecCCCEEEEecCCC---eEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEE-eCCCc-EEEEeC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENG---LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SHDSM-LKLWDL 152 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~---~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~iwd~ 152 (188)
+..+..++ ++|+|++++++..++ .|.+||+.+++.+..+..+. .+.+++|+|++++|+++ ..++. |.+|++
T Consensus 82 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 82 -GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY--DAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp -CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT--TEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred -CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC--CccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 66666636 899999999666553 89999999999888776553 57899999999866655 45578 999998
Q ss_pred CC
Q 029743 153 DD 154 (188)
Q Consensus 153 ~~ 154 (188)
..
T Consensus 159 ~~ 160 (331)
T 3u4y_A 159 DA 160 (331)
T ss_dssp CT
T ss_pred CC
Confidence 74
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=7e-18 Score=133.15 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=114.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc--eeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|||||++|++++. +.|++||+.++. ....+..+...+..++|+|||++|++++. +.|++||+.. +...+....
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~-g~~~~~~~~ 190 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLAS-GRQMQLTAD 190 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTT-TEEEECCCC
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCC-CCEEEeccC
Confidence 479999999999887 999999999872 34456667788999999999999998874 5899999975 333332222
Q ss_pred ccCCc----------------eeEE-eecCCCEEEEecCCC---------------------------------eEEEEe
Q 029743 79 LSPNS----------------VDAL-LKLDEDRVITGSENG---------------------------------LISLVG 108 (188)
Q Consensus 79 ~~~~~----------------v~~~-~~~~~~~l~~~~~d~---------------------------------~v~~~d 108 (188)
+... +..+ |+|||++|++++.++ .|++||
T Consensus 191 -~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 -GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp -CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred -CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 2221 3556 899999999987655 788999
Q ss_pred ccc-Ceeeeecc--cCCCcceeEEEeeCCCCEEEEEeC-----CCcEEEEeCCCccC
Q 029743 109 ILP-NRIIQPIA--EHSEYPIESLALSHDRKFLGSISH-----DSMLKLWDLDDILK 157 (188)
Q Consensus 109 ~~~-~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~ 157 (188)
+.+ ++...... .+.. .+..++| |||++|+.++. +..|++||+.+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDI-YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp SSTTCCCEEECCCSCSSE-EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CCCCCceEEecCCCCcce-EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 988 77554432 2433 7899999 99999987653 56799999987653
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=4.5e-17 Score=116.89 Aligned_cols=152 Identities=10% Similarity=0.064 Sum_probs=111.8
Q ss_pred CeeecccCeEEEEeC-CCcEEEEEcCCCce-eeeecccccceEEEEEEeCCCEEEEecCCC---eEEEEEeCCcccccce
Q 029743 1 MTFAADAMKLLGTSG-DGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKVVCGSQSG---TVLLYSWGYFKDCSDR 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~-d~~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~~~~~ 75 (188)
++|+|+++++++++. ++.|++||+.+++. ...+..+..+..+++|+|++++++++..++ .|.+||+.. +..+..
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~-~~~~~~ 123 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK-NKFIST 123 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT-TEEEEE
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC-CCeEEE
Confidence 479999997777666 78999999998887 666666666655599999999999655553 899999976 455555
Q ss_pred eeeccCCceeEE-eecCCCEEEEe-cCCCe-EEEEecccCeee-----eecccCCCcceeEEEeeCCCCEEEEE-eCCCc
Q 029743 76 FVGLSPNSVDAL-LKLDEDRVITG-SENGL-ISLVGILPNRII-----QPIAEHSEYPIESLALSHDRKFLGSI-SHDSM 146 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~-v~~~d~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~ 146 (188)
+.. ......+ ++|+|++++++ ..++. |.+|++.....+ ..+... . .+..++|+|++++++.+ ..++.
T Consensus 124 ~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-~-~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 124 IPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGG-T-RPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSS-S-SEEEEEECTTSSEEEEEETTTTE
T ss_pred EEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCC-C-CccceEECCCCCEEEEEeCCCCe
Confidence 553 3445677 89999866555 45577 999998753322 222222 2 57899999999976554 46899
Q ss_pred EEEEeCCCccC
Q 029743 147 LKLWDLDDILK 157 (188)
Q Consensus 147 i~iwd~~~~~~ 157 (188)
|.+||+.+...
T Consensus 200 v~v~d~~~~~~ 210 (331)
T 3u4y_A 200 IGILETQNPEN 210 (331)
T ss_dssp EEEEECSSTTS
T ss_pred EEEEECCCCcc
Confidence 99999987665
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=9.8e-18 Score=136.98 Aligned_cols=149 Identities=12% Similarity=0.131 Sum_probs=123.6
Q ss_pred Ceee-cccCeEEEEeCCCcEEEEEcCCCceeeeeccccc-ceEEEEEEeCCCEEEEecCCCeEE-EEEeCCcccccceee
Q 029743 1 MTFA-ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-ELTSVVLMKNGRKVVCGSQSGTVL-LYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s-~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~-~~d~~~~~~~~~~~~ 77 (188)
++|| |+|++|++++ ++.|++|++..+.... +..|.. .+..++|+ +|+.|++++.+..+. +|++.. +. ...+.
T Consensus 301 ~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~ 375 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT-GK-AEKFE 375 (1045)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT-CC-EEECC
T ss_pred eeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC-CC-ceEec
Confidence 4689 9999999988 6899999998876543 556666 89999999 999999988888888 889864 22 33444
Q ss_pred eccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCC----------c
Q 029743 78 GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDS----------M 146 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~ 146 (188)
+ +...+..+ |+|+|++|++++.++.|++||+.+++....+..|.. .+..++|+|||++|++++.++ .
T Consensus 376 ~-~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~-~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~ 453 (1045)
T 1k32_A 376 E-NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-MITDFTISDNSRFIAYGFPLKHGETDGYVMQA 453 (1045)
T ss_dssp C-CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-CCCCEEECTTSCEEEEEEEECSSTTCSCCEEE
T ss_pred C-CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC-CccceEECCCCCeEEEEecCccccccCCCCCe
Confidence 6 77788888 899999999999999999999999988777767755 789999999999998887644 8
Q ss_pred EEEEeCCCcc
Q 029743 147 LKLWDLDDIL 156 (188)
Q Consensus 147 i~iwd~~~~~ 156 (188)
|++||+.+..
T Consensus 454 i~l~d~~~g~ 463 (1045)
T 1k32_A 454 IHVYDMEGRK 463 (1045)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 9999998765
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=8.7e-18 Score=132.31 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=102.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeeccccc---ceEEEEEEeCCCEEEEecC---------CCeEEEEEeCC
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE---ELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWGY 68 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~ 68 (188)
++|+|+|+++++ +.|+.|++||+.+++....+..+.. .+.+++|+|||++|++++. ++.|++||+..
T Consensus 21 ~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 21 PNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred cEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 479999965555 4689999999999988766665543 3899999999999998876 68999999975
Q ss_pred ccccc--ceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeec-ccCCC----------------cceeE
Q 029743 69 FKDCS--DRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI-AEHSE----------------YPIES 128 (188)
Q Consensus 69 ~~~~~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~----------------~~v~~ 128 (188)
+..+ ..+ ...+..+ |+|||+.|+.+. ++.|++|++.+++..... .++.. ....+
T Consensus 100 -g~~~~~~~l----~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 100 -GEFVRGNEL----PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp -TEECCSSCC----CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred -Cccccceec----CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 3331 222 2345666 899999999885 679999999887765432 22211 01148
Q ss_pred EEeeCCCCEEEEEeCC
Q 029743 129 LALSHDRKFLGSISHD 144 (188)
Q Consensus 129 ~~~~~~~~~l~~~~~d 144 (188)
++|+|||++|++++.|
T Consensus 174 ~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFN 189 (719)
T ss_dssp EEECTTSSEEEEEEEE
T ss_pred EEECCCCCEEEEEEEC
Confidence 9999999999988755
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=1.6e-17 Score=128.09 Aligned_cols=143 Identities=6% Similarity=-0.033 Sum_probs=112.9
Q ss_pred eeecccCeE-EEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC----CeEEEEEeCCccccccee
Q 029743 2 TFAADAMKL-LGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 2 ~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~ 76 (188)
+|+|+|+.+ ++.+.++.+.+||+.+++.......+ . .+++|+|||+.|++++.+ ..|++||+.. +. ...+
T Consensus 116 ~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l 190 (582)
T 3o4h_A 116 SGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVF 190 (582)
T ss_dssp EEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT-CC-CEEE
T ss_pred eeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEe
Confidence 688888653 33444566669999988765544433 3 889999999999988776 7899999875 23 4466
Q ss_pred eeccCCceeEE-eecCCCEEEEecCCC--eEEEEecccCeeeeecccCCCcceeEEE--------eeCCCCEEEEEeCCC
Q 029743 77 VGLSPNSVDAL-LKLDEDRVITGSENG--LISLVGILPNRIIQPIAEHSEYPIESLA--------LSHDRKFLGSISHDS 145 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~ 145 (188)
.. +...+..+ |+|||+.|+++..++ .|++||+.+++.. .+..+.. .+..++ |+|||..+++++.++
T Consensus 191 ~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 191 DS-GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSK-DFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CC-SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCS-HHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred ec-CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCc-ChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 77 77778888 899999999888888 8999999988877 6666644 566677 999998888999999
Q ss_pred cEEEEeC
Q 029743 146 MLKLWDL 152 (188)
Q Consensus 146 ~i~iwd~ 152 (188)
.+++|++
T Consensus 268 ~~~l~~~ 274 (582)
T 3o4h_A 268 RSAVFID 274 (582)
T ss_dssp EEEEEET
T ss_pred cEEEEEE
Confidence 9999999
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=8.7e-17 Score=116.30 Aligned_cols=152 Identities=11% Similarity=0.101 Sum_probs=107.4
Q ss_pred CeeecccCeEEEEeC---CCcEEEEEcCCCc--eeeeecccccceEEEEEEeCCCEEEEec-CCCeEEEEEeCCcccc--
Q 029743 1 MTFAADAMKLLGTSG---DGTLSVCNLRKNT--VQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDC-- 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~---d~~i~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~-- 72 (188)
++|+|+|+ |++++. ++.|++|++..+. .+..+..+...+..++|+|++++|++++ .++.+.+|++...+..
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 47899999 665554 5899999997765 3334445677889999999999888877 6789999999642221
Q ss_pred cceeeecc---------CCceeEE-eecCCCEEEEecCCCeEEEEecc-cCeee--eecccCCCcceeEEEeeCCCCEEE
Q 029743 73 SDRFVGLS---------PNSVDAL-LKLDEDRVITGSENGLISLVGIL-PNRII--QPIAEHSEYPIESLALSHDRKFLG 139 (188)
Q Consensus 73 ~~~~~~~~---------~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~-~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~ 139 (188)
+..+.. . ...+.++ ++|+|+++++...++.|++|++. +++.. ..+..+.+..+..++|+|+|++|+
T Consensus 124 ~~~~~~-~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 124 TDTVQH-SGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEEC-CCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cceeec-CCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 222211 1 1136667 89999966677778899999998 45432 222222222577899999999766
Q ss_pred E-EeCCCcEEEEeCCC
Q 029743 140 S-ISHDSMLKLWDLDD 154 (188)
Q Consensus 140 ~-~~~d~~i~iwd~~~ 154 (188)
+ ...++.|.+|++..
T Consensus 203 v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 203 LAGELSSQIASLKYDT 218 (347)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEeCCCCEEEEEEecC
Confidence 5 45678999999874
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=3e-17 Score=118.33 Aligned_cols=149 Identities=8% Similarity=0.006 Sum_probs=110.3
Q ss_pred CeeecccCeEEEEeCC------------CcEEEEEcCCCcee---eeecccccceEEEEEEeCCCEEEEecCCCeEEEEE
Q 029743 1 MTFAADAMKLLGTSGD------------GTLSVCNLRKNTVQ---TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYS 65 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d------------~~i~i~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 65 (188)
++|+|+|++|++++.+ +.|.+||+.+++.. ..+. +...+.+++|+|+++ +++++. .|.+||
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d 172 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMD 172 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEEC
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEe
Confidence 4799999999998865 89999999875433 2333 344688999999999 555544 499999
Q ss_pred eCCcccccceeeeccC----------------------------------------------------------------
Q 029743 66 WGYFKDCSDRFVGLSP---------------------------------------------------------------- 81 (188)
Q Consensus 66 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 81 (188)
+.. ++....+.. ..
T Consensus 173 ~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (349)
T 1jmx_B 173 VKT-GKYTVALPL-RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 250 (349)
T ss_dssp TTT-CCEEEEECS-TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred CCC-Cceeccccc-cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc
Confidence 865 233332221 10
Q ss_pred ----CceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 82 ----NSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 82 ----~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
..+..+ ++| ++++++++ ++.|.+||+.+++.+..+... . .+.+++|+|++++|++++.++.|.+||+++.
T Consensus 251 ~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 251 ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-H-TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-S-CCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-C-CccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 122334 568 99999888 889999999999887777644 3 5789999999999988888999999999876
Q ss_pred cCCC
Q 029743 156 LKGS 159 (188)
Q Consensus 156 ~~~~ 159 (188)
+...
T Consensus 327 ~~~~ 330 (349)
T 1jmx_B 327 EKVK 330 (349)
T ss_dssp EEEE
T ss_pred ceee
Confidence 6443
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.75 E-value=5.1e-17 Score=132.81 Aligned_cols=147 Identities=11% Similarity=0.022 Sum_probs=122.2
Q ss_pred eeecccCeEEEEeCCCcEE-EEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 2 TFAADAMKLLGTSGDGTLS-VCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~-i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
+|+ +|+.|++++.+..+. +|++..++.... ..|...+..++|+|+|+.|++++.++.|++||+.+ +........ +
T Consensus 344 ~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~-~ 419 (1045)
T 1k32_A 344 GGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERS-R 419 (1045)
T ss_dssp CSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEEC-S
T ss_pred eEc-CCCeEEEEECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEeccC-C
Confidence 578 999999998888888 899887765443 37778899999999999999999999999999975 455555556 7
Q ss_pred CCceeEE-eecCCCEEEEecCCC----------eEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 81 PNSVDAL-LKLDEDRVITGSENG----------LISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~----------~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
...+..+ |+|+|++|++++.++ .|++||+.+++ ...+..+.. .+..++|+|+|++|+.++.++...+
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~-~~~~~~~spdG~~l~~~s~~~~~~~ 497 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENS-HDYAPAFDADSKNLYYLSYRSLDPS 497 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSS-BEEEEEECTTSCEEEEEESCCCCCE
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCc-ccCCceEcCCCCEEEEEecccCCcC
Confidence 7888888 899999998887644 89999999887 566666654 6889999999999999998888888
Q ss_pred EeCCC
Q 029743 150 WDLDD 154 (188)
Q Consensus 150 wd~~~ 154 (188)
|+...
T Consensus 498 ~~~~~ 502 (1045)
T 1k32_A 498 PDRVV 502 (1045)
T ss_dssp ECSSS
T ss_pred cchhc
Confidence 87653
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=4.9e-17 Score=127.79 Aligned_cols=149 Identities=10% Similarity=0.045 Sum_probs=111.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc----cccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF----KDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~----~~~~~~~ 76 (188)
++|||| +.++.+. ++.|++||+.+++.... ..+...+.+++|+|+|+.|+++ .++.|++|++... +...+..
T Consensus 87 ~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 87 TLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp EEETTT-TEEEEEE-TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC
T ss_pred EEECCC-CeEEEEE-CCEEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec
Confidence 368999 6666654 49999999998876543 4466778999999999999885 6789999999751 2333322
Q ss_pred eeccCCc--------------eeEE-eecCCCEEEEec---------------------------------CCCeEEEEe
Q 029743 77 VGLSPNS--------------VDAL-LKLDEDRVITGS---------------------------------ENGLISLVG 108 (188)
Q Consensus 77 ~~~~~~~--------------v~~~-~~~~~~~l~~~~---------------------------------~d~~v~~~d 108 (188)
.. +... +.++ |+|||++|++++ .+..|++||
T Consensus 163 ~~-~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 163 ID-GTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp SC-CBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred cC-CCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 22 2221 3566 899999999887 446799999
Q ss_pred cccCeeeeecc--cCCCcceeEEEeeCCCCEEEEEeCCC-----cEEEEeCCCc
Q 029743 109 ILPNRIIQPIA--EHSEYPIESLALSHDRKFLGSISHDS-----MLKLWDLDDI 155 (188)
Q Consensus 109 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~ 155 (188)
+.+++...... .+.. .+..++|+|||++|++++.++ .|++||+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 242 LATGKTVYLQTGEPKEK-FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp TTTTEEEECCCCSCTTC-EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred CCCCceEeeccCCCCce-eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 99887654442 3333 689999999999999887665 8999999876
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=4.4e-16 Score=113.25 Aligned_cols=150 Identities=9% Similarity=0.141 Sum_probs=104.1
Q ss_pred CeeecccCeEEEEeC-CCcEEEEEcCCCc-------ee------eeecccccceEEEEEEeCCCEEEEec-CCCeEEEEE
Q 029743 1 MTFAADAMKLLGTSG-DGTLSVCNLRKNT-------VQ------TRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYS 65 (188)
Q Consensus 1 l~~s~~~~~l~~~~~-d~~i~i~~~~~~~-------~~------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d 65 (188)
++|+|+|++|++++. ++.|++|++.... .. .....+...+..++|+|+|+++++++ .++.|.+|+
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 478999997766654 7899999887533 11 11123445678999999999887766 688999999
Q ss_pred eCCcccc--cceeee--ccCCceeEE-eecCCCEEEEecC--CCeEEEEecc--cCe--eeeecccCCCcceeEEEeeCC
Q 029743 66 WGYFKDC--SDRFVG--LSPNSVDAL-LKLDEDRVITGSE--NGLISLVGIL--PNR--IIQPIAEHSEYPIESLALSHD 134 (188)
Q Consensus 66 ~~~~~~~--~~~~~~--~~~~~v~~~-~~~~~~~l~~~~~--d~~v~~~d~~--~~~--~~~~~~~~~~~~v~~~~~~~~ 134 (188)
+.. +.. +..+.. .+......+ |+|+|++|+++.. ++.|.+|++. +++ .+..+.. +..+..++|+|+
T Consensus 240 ~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~spd 316 (361)
T 3scy_A 240 YAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIITPN 316 (361)
T ss_dssp EET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEECTT
T ss_pred ecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEECCC
Confidence 974 222 222211 022335577 8999998877665 4899999986 344 3444443 226789999999
Q ss_pred CCEEEEEe-CCCcEEEEeCC
Q 029743 135 RKFLGSIS-HDSMLKLWDLD 153 (188)
Q Consensus 135 ~~~l~~~~-~d~~i~iwd~~ 153 (188)
+++|++++ .++.|.+|++.
T Consensus 317 g~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 317 GKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SCEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEEE
Confidence 99888877 67899997554
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.74 E-value=5.7e-16 Score=111.99 Aligned_cols=151 Identities=13% Similarity=0.170 Sum_probs=104.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcC-CCceee--eecc-cccceEEEEEEeCCCEEEE-ecCCCeEEEEEeCCc-ccc--
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLR-KNTVQT--RSEF-SEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYF-KDC-- 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~-~~~-- 72 (188)
++|+|+|+++++...++.|++|++. +++... .+.. ....+..++|+|+|+++++ ...++.+.+|+++.. +..
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 4789999965665667899999998 454322 1222 2336788999999996665 566789999998741 221
Q ss_pred cceeeeccC------CceeEE-eecCCCEEE-EecCCCeEEEEeccc-C--eeeeecccCCCcceeEEEeeCCCCEEEEE
Q 029743 73 SDRFVGLSP------NSVDAL-LKLDEDRVI-TGSENGLISLVGILP-N--RIIQPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 73 ~~~~~~~~~------~~v~~~-~~~~~~~l~-~~~~d~~v~~~d~~~-~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
+..+.. .. ..+..+ |+|+|++|+ +...++.|.+|++.. + +.+..+..+.. .+..++|+|++++|+++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 226 LGIVKT-IPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-FPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp EEEEES-SCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS-CCCEEEECTTSSEEEEE
T ss_pred eeeeee-cCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC-CcCeEEECCCCCEEEEE
Confidence 122221 11 236667 899999875 455689999999873 2 44555555433 57899999999988877
Q ss_pred eC-CCcEEEEeCC
Q 029743 142 SH-DSMLKLWDLD 153 (188)
Q Consensus 142 ~~-d~~i~iwd~~ 153 (188)
+. ++.|.+|++.
T Consensus 304 ~~~~~~v~v~~~d 316 (347)
T 3hfq_A 304 NQNTDNATLYARD 316 (347)
T ss_dssp ETTTTEEEEEEEC
T ss_pred EcCCCcEEEEEEe
Confidence 75 4899999553
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=3.3e-17 Score=128.77 Aligned_cols=150 Identities=13% Similarity=0.105 Sum_probs=111.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCC-----Cceeeeecccccc--------------eEEEEEEeCCCEEEEec-----
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRK-----NTVQTRSEFSEEE--------------LTSVVLMKNGRKVVCGS----- 56 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~----- 56 (188)
++|||||++|+++ .++.|++|++.+ ++.......+... +.+++|+|||++|++++
T Consensus 126 ~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 126 LDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp CEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 4799999999995 679999999998 7766544433332 48999999999999887
Q ss_pred ----------------------------CCCeEEEEEeCCccccccee--eeccCCceeEE-eecCCCEEEEecCCC---
Q 029743 57 ----------------------------QSGTVLLYSWGYFKDCSDRF--VGLSPNSVDAL-LKLDEDRVITGSENG--- 102 (188)
Q Consensus 57 ----------------------------~d~~i~~~d~~~~~~~~~~~--~~~~~~~v~~~-~~~~~~~l~~~~~d~--- 102 (188)
.+..|++||+... ...... .. +...+..+ |+|+|++|++++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~ 282 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-KTVYLQTGEP-KEKFLTNLSWSPDENILYVAEVNRAQN 282 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-EEEECCCCSC-TTCEEEEEEECTTSSEEEEEEECTTSC
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-ceEeeccCCC-CceeEeeEEEECCCCEEEEEEeCCCCC
Confidence 3467999999753 322222 13 55667788 899999999877665
Q ss_pred --eEEEEecccCeeeeecc-cCCCc---ceeEEEeeC--CCCEEEEEeCCCcEEEEeCC
Q 029743 103 --LISLVGILPNRIIQPIA-EHSEY---PIESLALSH--DRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 103 --~v~~~d~~~~~~~~~~~-~~~~~---~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~ 153 (188)
.|++||+.+++....+. ..... .+..++|+| +|+++++++.++.+++|.+.
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 89999999883333332 21111 246789999 99999999899999998775
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=1.9e-16 Score=114.12 Aligned_cols=151 Identities=10% Similarity=0.021 Sum_probs=112.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccc-cceEEEEEEeCCCEEE-EecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++++++++++++++.++.|++||+.+++.+..+..+. ..+..++|+|+++.++ +...++.|.+||+.+ +.....+..
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-CKNTFHANL 83 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEES
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-CcEEEEEEc
Confidence 4678889999999999999999999998887776432 2578999999998665 555788999999976 344444442
Q ss_pred cc-----CCceeEE-eecCCCEEEEecCC------------CeEEEEecccCeee---eecccCCCcceeEEEeeCCCCE
Q 029743 79 LS-----PNSVDAL-LKLDEDRVITGSEN------------GLISLVGILPNRII---QPIAEHSEYPIESLALSHDRKF 137 (188)
Q Consensus 79 ~~-----~~~v~~~-~~~~~~~l~~~~~d------------~~v~~~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~ 137 (188)
.+ ...+..+ ++|+|+++++++.+ +.|.+||+.+++.. ..+..+ . .+.+++|+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~-~~~~~~~s~dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-R-QVYLMRAADDGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-S-SCCCEEECTTSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-C-cccceeECCCCc-
Confidence 02 1225666 89999999988865 89999999885433 333333 3 588999999999
Q ss_pred EEEEeCCCcEEEEeCCCccC
Q 029743 138 LGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~~ 157 (188)
+++++ +.|.+||+.+...
T Consensus 161 l~~~~--~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 161 LYVAG--PDIYKMDVKTGKY 178 (349)
T ss_dssp EEEES--SSEEEECTTTCCE
T ss_pred EEEcc--CcEEEEeCCCCce
Confidence 55554 3499999987654
No 156
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.73 E-value=1.7e-16 Score=114.07 Aligned_cols=142 Identities=16% Similarity=0.186 Sum_probs=104.9
Q ss_pred CeEEEE-eCCCcEEEEEcC-CCc--eeeeecccccceEEEEEEeCCCEEEEecCC-CeEEEEEeCCc-cc--ccceeeec
Q 029743 8 MKLLGT-SGDGTLSVCNLR-KNT--VQTRSEFSEEELTSVVLMKNGRKVVCGSQS-GTVLLYSWGYF-KD--CSDRFVGL 79 (188)
Q Consensus 8 ~~l~~~-~~d~~i~i~~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~-~~--~~~~~~~~ 79 (188)
++++++ +.++.|++|++. ++. .+..+ .+...+.+++|+|++++|++++.+ +.|.+|+++.. +. .+..+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~- 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL- 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-
Confidence 344444 779999999995 332 23333 467789999999999988888876 89999999721 22 2233333
Q ss_pred cCCceeEE-eecCCCEEEEec-CCCeEEEEec---ccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCC
Q 029743 80 SPNSVDAL-LKLDEDRVITGS-ENGLISLVGI---LPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (188)
+. .+..+ ++|+|+++++++ .++.|.+||+ ...+....+..+ . .+.+++|+|++++|++++ .++.|.+||+.
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-D-GCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-T-TBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-C-CceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 33 66777 899999876665 5889999999 444555555555 3 588999999999888777 88999999998
Q ss_pred C
Q 029743 154 D 154 (188)
Q Consensus 154 ~ 154 (188)
+
T Consensus 160 ~ 160 (343)
T 1ri6_A 160 D 160 (343)
T ss_dssp T
T ss_pred C
Confidence 6
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=1.8e-17 Score=130.51 Aligned_cols=154 Identities=14% Similarity=0.029 Sum_probs=108.4
Q ss_pred CeeecccCeEEEEeC---------CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc
Q 029743 1 MTFAADAMKLLGTSG---------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD 71 (188)
Q Consensus 1 l~~s~~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 71 (188)
++|||||++|++++. ++.|++||+.+++.+.... ....+..++|+|||+.|+.+. ++.|++|++..+ .
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g-~ 141 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD-P 141 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS-C
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCC-C
Confidence 369999999998876 6899999999887631111 124688999999999999885 679999999753 3
Q ss_pred cccee-eeccCCce-----------------eEE-eecCCCEEEEecCCC------------------------------
Q 029743 72 CSDRF-VGLSPNSV-----------------DAL-LKLDEDRVITGSENG------------------------------ 102 (188)
Q Consensus 72 ~~~~~-~~~~~~~v-----------------~~~-~~~~~~~l~~~~~d~------------------------------ 102 (188)
..+.. .+ +...+ .++ |+|||++|++++.+.
T Consensus 142 ~~~l~~~~-~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 142 PFQITFNG-RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CEECCCCC-BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred cEEEecCC-CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 32221 12 22111 356 899999999887542
Q ss_pred ----eEEEEecccCeee--------eecccCCCcceeEEEeeCCCCEEEEEeCC----CcEEEEe----CCCccCCC
Q 029743 103 ----LISLVGILPNRII--------QPIAEHSEYPIESLALSHDRKFLGSISHD----SMLKLWD----LDDILKGS 159 (188)
Q Consensus 103 ----~v~~~d~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd----~~~~~~~~ 159 (188)
.|++||+.+++.. ..+.++.. .+..++|+||++.+++.... ..|.+|| +.++....
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY-YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE-EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCeeEEEEEECCCCCccceeEccCCccCCCCcc-eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 7889999887643 12334544 68999999998777664432 2488899 76655443
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=8.1e-17 Score=124.10 Aligned_cols=151 Identities=10% Similarity=-0.013 Sum_probs=102.7
Q ss_pred CeeecccCeEEEEeC-CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC---CCeEEEEEeCC--c-----
Q 029743 1 MTFAADAMKLLGTSG-DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ---SGTVLLYSWGY--F----- 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~--~----- 69 (188)
++|+|||++||+++. ++++.||++..++..+....+...+..++|+|+ +.+++++. +....+|.++. .
T Consensus 27 ~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~ 105 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQR 105 (582)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEE
T ss_pred eecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcccc
Confidence 478999999999887 999999998766554333222245666666666 45554443 23333433321 1
Q ss_pred ------------------------------------ccccceeeeccCCceeEE-eecCCCEEEEecCC----CeEEEEe
Q 029743 70 ------------------------------------KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSEN----GLISLVG 108 (188)
Q Consensus 70 ------------------------------------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d----~~v~~~d 108 (188)
+.. ..+.. +.. .++ |+|||+++++++.+ +.|++||
T Consensus 106 l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d 181 (582)
T 3o4h_A 106 LEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-RELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSN 181 (582)
T ss_dssp CTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-EEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-EEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEc
Confidence 111 11111 111 455 78999999988766 7799999
Q ss_pred cccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCC--cEEEEeCCCccCC
Q 029743 109 ILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDS--MLKLWDLDDILKG 158 (188)
Q Consensus 109 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~ 158 (188)
+.+++.. .+..+.+ .+..++|+|||++|+++..++ .|++||+.+....
T Consensus 182 ~~~g~~~-~l~~~~~-~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 182 LSSGGLR-VFDSGEG-SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp TTTCCCE-EECCSSC-EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCCCce-EeecCCC-ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 9887765 5666655 789999999999999887888 8999999876654
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.72 E-value=6.7e-16 Score=110.65 Aligned_cols=145 Identities=14% Similarity=0.057 Sum_probs=112.3
Q ss_pred CeEEEEeCCCcEEEEEcCCCceeeeeccccc--ceEEEEEEeCCCEE-EEecCCCeEEEEEeCCcccccceeeecc----
Q 029743 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE--ELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVGLS---- 80 (188)
Q Consensus 8 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~---- 80 (188)
+++++++.++.|++||+.+++.+..+..... .+..++|+|+++.+ +++..++.|.+||+.+ +..+..+...+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-GETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-CCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC-CCeEeeEEcCCcccc
Confidence 4788999999999999999988877763221 57899999999766 4556678999999976 45554444201
Q ss_pred CCceeEE-eecCCCEEEEec------------CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcE
Q 029743 81 PNSVDAL-LKLDEDRVITGS------------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSML 147 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~------------~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 147 (188)
...+..+ ++|+|++++++. .++.|.+||+.+++.+..+... . .+.+++|+|++++|+++ ++.|
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP-R-QITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC-S-SCCCEEECTTSSCEEEE--SSSE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC-C-CcceeEECCCCCEEEEe--CCeE
Confidence 1145566 899999988886 5789999999998887777654 3 57889999999988877 6889
Q ss_pred EEEeCCCccC
Q 029743 148 KLWDLDDILK 157 (188)
Q Consensus 148 ~iwd~~~~~~ 157 (188)
++||+.+...
T Consensus 157 ~~~d~~~~~~ 166 (337)
T 1pby_B 157 HVMDPEAGTL 166 (337)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCCCcE
Confidence 9999987654
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.70 E-value=4.2e-16 Score=113.74 Aligned_cols=151 Identities=9% Similarity=0.118 Sum_probs=107.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcC-CCceeeeeccc-ccceEEEEEEeCCCE--EEEec-------------CCCeEEE
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLR-KNTVQTRSEFS-EEELTSVVLMKNGRK--VVCGS-------------QSGTVLL 63 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~~ 63 (188)
++|+|+|++|++++.+ .|.+|++. +++........ .+.+..++|+|+|+. +++++ .++.+.+
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 4789999999998887 99999997 77654432211 123556889999984 45553 6889999
Q ss_pred EEeCCcccccceeee---ccCCceeEE-eecCCCEEEEec-CCCeEEEEecc-cCeee--eecc--cCCCcceeEEEeeC
Q 029743 64 YSWGYFKDCSDRFVG---LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGIL-PNRII--QPIA--EHSEYPIESLALSH 133 (188)
Q Consensus 64 ~d~~~~~~~~~~~~~---~~~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~-~~~~~--~~~~--~~~~~~v~~~~~~~ 133 (188)
|++...+.....+.. .+...+.++ ++|+|++++++. .++.|++|++. +++.. ..+. .+.. .+..++|+|
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~-~p~~~~~sp 202 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD-HPRWVAMHP 202 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC-CEEEEEECT
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC-CCCEeEECC
Confidence 999743443333321 034567777 899999888765 46799999998 66543 2333 2223 588999999
Q ss_pred CCCEEEEEeC-CCcEEEEeCC
Q 029743 134 DRKFLGSISH-DSMLKLWDLD 153 (188)
Q Consensus 134 ~~~~l~~~~~-d~~i~iwd~~ 153 (188)
+|++|++++. ++.|.+|++.
T Consensus 203 dg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 203 TGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCeEEEEEEe
Confidence 9999887764 6899999765
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=4e-16 Score=123.49 Aligned_cols=137 Identities=12% Similarity=0.040 Sum_probs=102.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccc-----eEEEEEEeCCCEEEEecCC---------CeEEEEEe
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEE-----LTSVVLMKNGRKVVCGSQS---------GTVLLYSW 66 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~i~~~d~ 66 (188)
++|+|||++++++ |++|++||+.+++....+.+|... ...+.|||||++|+.++.+ +.+.+||+
T Consensus 22 ~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 22 LRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 4799999988886 899999999999887777766533 2448899999999988875 56779999
Q ss_pred CCcccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeec-ccCCCc----------------ceeE
Q 029743 67 GYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI-AEHSEY----------------PIES 128 (188)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~----------------~v~~ 128 (188)
.+ ++ ...+.. +...+... |||||+.|+.+. ++.|++|++.++...+.. .++... ....
T Consensus 100 ~~-~~-~~~l~~-~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 100 NK-RQ-LITEER-IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp TT-TE-ECCSSC-CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred CC-Cc-EEEccc-CCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcc
Confidence 76 33 334555 66677777 899999998884 678999999887754322 222110 1134
Q ss_pred EEeeCCCCEEEEEeC
Q 029743 129 LALSHDRKFLGSISH 143 (188)
Q Consensus 129 ~~~~~~~~~l~~~~~ 143 (188)
+.|+|||++|+.++.
T Consensus 176 ~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQF 190 (740)
T ss_dssp EEECTTSSEEEEEEE
T ss_pred eEECCCCCEEEEEEE
Confidence 899999999988753
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=1.3e-15 Score=118.87 Aligned_cols=152 Identities=12% Similarity=0.036 Sum_probs=111.0
Q ss_pred CeeecccCeEEEEeCC----------CcEEEEEcCC------Cceeeeec-ccccceEEEEEEeCCCEEEEecCC-----
Q 029743 1 MTFAADAMKLLGTSGD----------GTLSVCNLRK------NTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQS----- 58 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d----------~~i~i~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----- 58 (188)
++|||||+.|++++.+ ..|++|++.+ ++.. .+. .+...+..++|+|||++|+.++.+
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~ 213 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP 213 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCT
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCC
Confidence 3799999999998876 5899999987 5543 444 456778899999999999877754
Q ss_pred ---CeEEEEEeCCcc---cccceeeeccCCceeEE-eecCCCEEEEecCCC--eEEEEecccCeeeeecccCCCc-----
Q 029743 59 ---GTVLLYSWGYFK---DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENG--LISLVGILPNRIIQPIAEHSEY----- 124 (188)
Q Consensus 59 ---~~i~~~d~~~~~---~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~----- 124 (188)
..|++||+...+ ........ +...+..+ |+|+|++++++..++ .|++||+.+++.......+...
T Consensus 214 ~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 214 WEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 379999997323 33333333 46777888 899999888887777 6777777666655444333221
Q ss_pred --ceeEEEeeCCCCEEEEEeCCCcEEEE--eCCCc
Q 029743 125 --PIESLALSHDRKFLGSISHDSMLKLW--DLDDI 155 (188)
Q Consensus 125 --~v~~~~~~~~~~~l~~~~~d~~i~iw--d~~~~ 155 (188)
.+..++|+|++++++++.. +.+++| |+.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~ 326 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG 326 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC
Confidence 1567899999999999888 999999 55543
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=4.1e-15 Score=108.89 Aligned_cols=152 Identities=11% Similarity=0.030 Sum_probs=112.7
Q ss_pred eeecccCeEEEEeC-CC--cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGTSG-DG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~~~-d~--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
+|||||++|++++. ++ .|++||+.+++.......+...+..+.|+|+++.|+.++.++.+++||+.. ++.......
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-g~~~~~~~~ 120 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLAT-LEENVVYQV 120 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEEC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCC-Ccceeeeec
Confidence 69999999998887 56 488889998888776666666666788999999999999999999999976 344444443
Q ss_pred ccCCceeEE---eecCCCEEEEe----------------------cCCCeEEEEecccCeeeeecccCCCcceeEEEeeC
Q 029743 79 LSPNSVDAL---LKLDEDRVITG----------------------SENGLISLVGILPNRIIQPIAEHSEYPIESLALSH 133 (188)
Q Consensus 79 ~~~~~v~~~---~~~~~~~l~~~----------------------~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 133 (188)
+...+... ++|++++++.. ..+..|++||+.+++..... .+.. .+..++|+|
T Consensus 121 -~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 121 -PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQ-WLGHPIYRP 197 (388)
T ss_dssp -CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESS-CEEEEEEET
T ss_pred -hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCc-cccccEECC
Confidence 44433322 48999988742 24467999999988755443 3434 689999999
Q ss_pred -CCCEEEEEeCC------CcEEEEeCCCccC
Q 029743 134 -DRKFLGSISHD------SMLKLWDLDDILK 157 (188)
Q Consensus 134 -~~~~l~~~~~d------~~i~iwd~~~~~~ 157 (188)
+++.|+....+ ..|.++|+.....
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 99988877653 3788888876543
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.67 E-value=1.1e-14 Score=106.15 Aligned_cols=153 Identities=8% Similarity=-0.001 Sum_probs=104.0
Q ss_pred CeeecccCe--EEEEe-------------CCCcEEEEEcC-CCceeeeec----ccccceEEEEEEeCCCEEEEecC-CC
Q 029743 1 MTFAADAMK--LLGTS-------------GDGTLSVCNLR-KNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQ-SG 59 (188)
Q Consensus 1 l~~s~~~~~--l~~~~-------------~d~~i~i~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~ 59 (188)
++|+|+|++ ++++. .++.+.+|++. .++....+. .+...+.+++|+|+|+++++++. ++
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~ 167 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN 167 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC
Confidence 468999994 44553 68899999997 465543333 24567899999999998887654 67
Q ss_pred eEEEEEeCCcccc--cceeee-ccCCceeEE-eecCCCEEEEec-CCCeEEEEecc--cCeee------eecccC-CC-c
Q 029743 60 TVLLYSWGYFKDC--SDRFVG-LSPNSVDAL-LKLDEDRVITGS-ENGLISLVGIL--PNRII------QPIAEH-SE-Y 124 (188)
Q Consensus 60 ~i~~~d~~~~~~~--~~~~~~-~~~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~--~~~~~------~~~~~~-~~-~ 124 (188)
.|++|++...+.. +..+.. .+...+..+ |+|+|+++++++ .++.|.+|++. +++.. ..+... .+ .
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 9999999721222 122221 024457777 899999988776 47899999765 45432 122211 01 1
Q ss_pred -------ceeEEE-eeCCCCEEEEEeCC-C-----cEEEEeCC
Q 029743 125 -------PIESLA-LSHDRKFLGSISHD-S-----MLKLWDLD 153 (188)
Q Consensus 125 -------~v~~~~-~~~~~~~l~~~~~d-~-----~i~iwd~~ 153 (188)
.+..++ |+|||++|+++..+ . .|.+|++.
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 378899 99999998766543 2 89999986
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.66 E-value=2e-14 Score=104.44 Aligned_cols=152 Identities=14% Similarity=0.155 Sum_probs=102.6
Q ss_pred CeeecccCeEEEEeCC----CcEEEEEcCC--Cce--eeeecccccceEEEEEEeCCCEEEEec-CCCeEEEEEeCCccc
Q 029743 1 MTFAADAMKLLGTSGD----GTLSVCNLRK--NTV--QTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKD 71 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d----~~i~i~~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~ 71 (188)
++|+|+|++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++|++++ .++.+.+|++...+.
T Consensus 55 l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~ 132 (361)
T 3scy_A 55 LIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGA 132 (361)
T ss_dssp EEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSC
T ss_pred EEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCc
Confidence 4799999999999875 7999998865 433 2233334556677777 788777665 578999999975332
Q ss_pred ccce--eeecc-----------CCceeEE-eecCCCEEEEec-CCCeEEEEecccCee------e------eecccCCCc
Q 029743 72 CSDR--FVGLS-----------PNSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRI------I------QPIAEHSEY 124 (188)
Q Consensus 72 ~~~~--~~~~~-----------~~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~~~~~------~------~~~~~~~~~ 124 (188)
.... ... + ...+.++ ++|+|+++++++ .++.|++|++..... + .......+.
T Consensus 133 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (361)
T 3scy_A 133 LLPASDVIE-FKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS 211 (361)
T ss_dssp BCSCSEEEE-CCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC
T ss_pred CcccceeEE-ccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC
Confidence 2111 111 1 1223667 899999766554 588999998875331 1 111112122
Q ss_pred ceeEEEeeCCCCEEEEEe-CCCcEEEEeCCCc
Q 029743 125 PIESLALSHDRKFLGSIS-HDSMLKLWDLDDI 155 (188)
Q Consensus 125 ~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 155 (188)
.+..++|+|++++|++++ .++.|.+|++.+.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 578999999999887776 6899999998754
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=1.7e-15 Score=119.85 Aligned_cols=150 Identities=11% Similarity=0.063 Sum_probs=106.8
Q ss_pred eeecccCeEEEEeCC---------CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc
Q 029743 2 TFAADAMKLLGTSGD---------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 72 (188)
+|||||++|+.++.+ +.+++||+.+++.. .+..+...+..++|||||+.|+.+. ++.|++|++..+ ..
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~-~~ 144 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL-PS 144 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS-CC
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC-ce
Confidence 579999999998875 56679999998765 4556778899999999999998874 679999998753 32
Q ss_pred cc-eeeeccCCce-----------------eEE-eecCCCEEEEecCCC-------------------------------
Q 029743 73 SD-RFVGLSPNSV-----------------DAL-LKLDEDRVITGSENG------------------------------- 102 (188)
Q Consensus 73 ~~-~~~~~~~~~v-----------------~~~-~~~~~~~l~~~~~d~------------------------------- 102 (188)
.+ +..+ +...+ ..+ |||||++|+..+.|.
T Consensus 145 ~~lt~~g-~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 145 YRITWTG-KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp EECCSCC-BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred EEEcCCC-CccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 22 1222 22111 235 899999998874221
Q ss_pred -----eEEEEeccc---Ce--eeeecc------cCCCcceeEEEeeCCCCEEEEEeC----CCcEEEEeCCCcc
Q 029743 103 -----LISLVGILP---NR--IIQPIA------EHSEYPIESLALSHDRKFLGSISH----DSMLKLWDLDDIL 156 (188)
Q Consensus 103 -----~v~~~d~~~---~~--~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~ 156 (188)
.|++||+.+ ++ ....+. ++.. .+..++|+|||+.++.... +..|.+||+.++.
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDH-YLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCE-EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCe-EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 478899988 63 222333 2433 6899999999997665432 3479999998765
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.64 E-value=6.4e-15 Score=115.00 Aligned_cols=150 Identities=11% Similarity=-0.006 Sum_probs=105.4
Q ss_pred ecccCe-EEEEeC-CCcEEEEEcC--C-Cceeeeecc-----cccceEEEEEEeCCCEEEEecCC----------CeEEE
Q 029743 4 AADAMK-LLGTSG-DGTLSVCNLR--K-NTVQTRSEF-----SEEELTSVVLMKNGRKVVCGSQS----------GTVLL 63 (188)
Q Consensus 4 s~~~~~-l~~~~~-d~~i~i~~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~ 63 (188)
||||++ |+.++. +..|+++++. . +. ...+.. |...+..++|+|||+.|++++.+ ..|++
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 499998 776654 5667777765 2 43 334444 56788999999999999988876 58999
Q ss_pred EEeCCcc----cccceee-eccCCceeEE-eecCCCEEEEecCC--------CeEEEEecc-cC---eeeeecccCCCcc
Q 029743 64 YSWGYFK----DCSDRFV-GLSPNSVDAL-LKLDEDRVITGSEN--------GLISLVGIL-PN---RIIQPIAEHSEYP 125 (188)
Q Consensus 64 ~d~~~~~----~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d--------~~v~~~d~~-~~---~~~~~~~~~~~~~ 125 (188)
||+.... .....+. . +...+..+ |+|||++|+.++.+ ..|++||+. ++ +.......+.. .
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~-~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDD-AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE-A 243 (662)
T ss_dssp EETTSTTTTCGGGSEESSCS-CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB-C
T ss_pred EECCCCccccCCceeEEEec-CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc-e
Confidence 9987410 2334444 4 44556666 89999999877744 379999998 56 44433344334 7
Q ss_pred eeEEEeeCCCCEEEEEeCCC--cEEEEeCCCcc
Q 029743 126 IESLALSHDRKFLGSISHDS--MLKLWDLDDIL 156 (188)
Q Consensus 126 v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~ 156 (188)
+..++|+|||++++++..++ .|.+||+.+..
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 89999999999777777777 56666765544
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=7.5e-14 Score=98.30 Aligned_cols=149 Identities=11% Similarity=0.136 Sum_probs=110.6
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++++|+|+++++...++.|.+|+.. ++.+..+. .+...+.+++++++++.+++...++.|++|+.. +..+..+..
T Consensus 126 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~ 202 (286)
T 1q7f_A 126 VTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE--GQYLRQIGG 202 (286)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT--CCEEEEESC
T ss_pred EEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC--CCEEEEEcc
Confidence 4678999877777778899999954 55544443 344568999999999988888888999999974 344444543
Q ss_pred cc--CCceeEE-eecCCCEEEEecCCC-eEEEEecccCeeeeecccCCC-cceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 79 LS--PNSVDAL-LKLDEDRVITGSENG-LISLVGILPNRIIQPIAEHSE-YPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 79 ~~--~~~v~~~-~~~~~~~l~~~~~d~-~v~~~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
. ...+..+ ++++|+++++...++ .|.+|+. .++.+..+..+.. ..+.+++++|+++.+++ +.++.|++|++.
T Consensus 203 -~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 203 -EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp -TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred -CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 3 2456777 789999888888776 9999995 4666666654422 13779999999987666 579999999986
Q ss_pred Cc
Q 029743 154 DI 155 (188)
Q Consensus 154 ~~ 155 (188)
..
T Consensus 280 ~~ 281 (286)
T 1q7f_A 280 QL 281 (286)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.62 E-value=6.5e-14 Score=102.50 Aligned_cols=153 Identities=12% Similarity=0.013 Sum_probs=108.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEE--EEeCCCEEEEe----------------------c
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVV--LMKNGRKVVCG----------------------S 56 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~----------------------~ 56 (188)
++|+|||+.|+.++.++.|++||+.+++.......+...+.... ++|+++.++.. .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 37999999999999999999999999887666665555554444 47899888742 2
Q ss_pred CCCeEEEEEeCCcccccceeeeccCCceeEE-eec-CCCEEEEecCC------CeEEEEecccCeeeeecccCCC-ccee
Q 029743 57 QSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKL-DEDRVITGSEN------GLISLVGILPNRIIQPIAEHSE-YPIE 127 (188)
Q Consensus 57 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~-~~v~ 127 (188)
.+..|.+||+.. +. ...+.. +...+..+ |+| +|+.|+..... ..|.++|+..+... .+..+.. ..+.
T Consensus 166 ~~~~l~~~d~~~-g~-~~~l~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~ 241 (388)
T 3pe7_A 166 PCCRLMRVDLKT-GE-STVILQ-ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCT 241 (388)
T ss_dssp CCEEEEEEETTT-CC-EEEEEE-ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEE
T ss_pred CcceEEEEECCC-Cc-eEEeec-CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccc
Confidence 346789999875 33 444555 56667777 899 99988776643 36888887655443 3433322 2577
Q ss_pred EEEeeCCCCEEEEEeC-CC----cEEEEeCCCccC
Q 029743 128 SLALSHDRKFLGSISH-DS----MLKLWDLDDILK 157 (188)
Q Consensus 128 ~~~~~~~~~~l~~~~~-d~----~i~iwd~~~~~~ 157 (188)
.++|+|||+.|+..+. ++ .|++||+.++..
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 8999999998865443 22 399999987653
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=2.3e-13 Score=97.94 Aligned_cols=154 Identities=11% Similarity=0.009 Sum_probs=114.1
Q ss_pred CeeecccCeEEEEeCC------------------------CcEEEEEcCCCceeeeec-ccccceEEEEEEeCCCEEEEe
Q 029743 1 MTFAADAMKLLGTSGD------------------------GTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCG 55 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d------------------------~~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 55 (188)
|+++|+|+++++...+ +.|.+||..+++.+..+. .+-..+..++++|+|+++++.
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d 108 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTD 108 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEE
Confidence 5789999988887766 479999998888766554 344578999999999988888
Q ss_pred cCCCeEEEEEeCCcccccceee---------eccCCceeEE-eec-CCCEEEEec-CCCeEEEEecccCeeeeecccCCC
Q 029743 56 SQSGTVLLYSWGYFKDCSDRFV---------GLSPNSVDAL-LKL-DEDRVITGS-ENGLISLVGILPNRIIQPIAEHSE 123 (188)
Q Consensus 56 ~~d~~i~~~d~~~~~~~~~~~~---------~~~~~~v~~~-~~~-~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~~ 123 (188)
..++.|++|+.......+..+. . +-..+..+ ++| ++.++++.+ .++.|++|+ ..+..+..+.....
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~-~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~ 186 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQN-HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESS 186 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTT-CCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECC
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCcc-ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCC
Confidence 8899999999753211444442 2 23356777 788 788888886 689999999 45666666532211
Q ss_pred ---------cceeEEEeeCC-CCEEEEEeCCCcEEEEeCCCcc
Q 029743 124 ---------YPIESLALSHD-RKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 124 ---------~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
.....++++|+ +..+++...++.|++|+..++.
T Consensus 187 ~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 187 GSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp SSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 13789999998 6666777788999999998543
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.59 E-value=5.5e-14 Score=102.53 Aligned_cols=150 Identities=10% Similarity=0.098 Sum_probs=109.0
Q ss_pred CeeecccCeEEEEeC----------CCcEEEEEcCCCceeeeeccc------ccceEEEEEEeCCCEEEEecC--CCeEE
Q 029743 1 MTFAADAMKLLGTSG----------DGTLSVCNLRKNTVQTRSEFS------EEELTSVVLMKNGRKVVCGSQ--SGTVL 62 (188)
Q Consensus 1 l~~s~~~~~l~~~~~----------d~~i~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i~ 62 (188)
++|+||+++++++.. ++.|.+||..+++.+..+... ......++++|+|++|+++.. ++.|.
T Consensus 55 i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~ 134 (361)
T 2oiz_A 55 VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIG 134 (361)
T ss_dssp EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEE
T ss_pred eEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEE
Confidence 579999999998863 567999999988887776532 245678999999999998864 57899
Q ss_pred EEEeCCcccccce-ee------------------------------eccCCc----------------------------
Q 029743 63 LYSWGYFKDCSDR-FV------------------------------GLSPNS---------------------------- 83 (188)
Q Consensus 63 ~~d~~~~~~~~~~-~~------------------------------~~~~~~---------------------------- 83 (188)
+||+... +.+.. +. ......
T Consensus 135 v~d~~~~-~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 135 IVDVAKG-DYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEETTTT-EEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEECCCC-cEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9987542 11111 00 000000
Q ss_pred ---------------------------------------ee---EE-eecCCCEEEEecC-----------CCeEEEEec
Q 029743 84 ---------------------------------------VD---AL-LKLDEDRVITGSE-----------NGLISLVGI 109 (188)
Q Consensus 84 ---------------------------------------v~---~~-~~~~~~~l~~~~~-----------d~~v~~~d~ 109 (188)
.. .+ ++|++++++++.. .+.|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 00 03 5677777666532 347999999
Q ss_pred ccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 110 LPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 110 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
.+++.+..+..+. +.+++|+|+|++|++++. +.|.+||+.+.
T Consensus 294 ~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 294 KTKQRVARIPGRD---ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp TTTEEEEEEECTT---CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred CCCcEEEEEecCC---eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 9999999888763 789999999999988876 99999999987
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=1.1e-13 Score=99.57 Aligned_cols=152 Identities=11% Similarity=0.065 Sum_probs=110.8
Q ss_pred Ceeec-ccCeEEEEe-CCCcEEEEEcCCCceeeeecc----------cccceEEEEEEeC-CCEEEEecCCCeEEEEEeC
Q 029743 1 MTFAA-DAMKLLGTS-GDGTLSVCNLRKNTVQTRSEF----------SEEELTSVVLMKN-GRKVVCGSQSGTVLLYSWG 67 (188)
Q Consensus 1 l~~s~-~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~ 67 (188)
|+++| +++++++.+ .++.|++|+ .++..+..+.. +-.....++++|+ ++++++...++.|++|+..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 46888 777777775 589999999 55666665532 2234889999998 7777777888999999987
Q ss_pred Ccccccceeee-ccCCceeEE-eec------CCCEEEEecCCCeEEEEecccCeeeeecc---cCCCcceeEEEeeCCCC
Q 029743 68 YFKDCSDRFVG-LSPNSVDAL-LKL------DEDRVITGSENGLISLVGILPNRIIQPIA---EHSEYPIESLALSHDRK 136 (188)
Q Consensus 68 ~~~~~~~~~~~-~~~~~v~~~-~~~------~~~~l~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~ 136 (188)
+ +..+..+.. .+...+..+ ++| +|+..++...+..|++|++.+++.+..+. .+.. .+..++++|+|.
T Consensus 227 ~-G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~-~p~~ia~~~dG~ 304 (329)
T 3fvz_A 227 T-KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD-MPHDIVASEDGT 304 (329)
T ss_dssp T-CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS-SEEEEEECTTSE
T ss_pred C-CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC-CeeEEEECCCCC
Confidence 4 455555532 034456667 677 34433333445689999999999888763 3433 689999999998
Q ss_pred EEEEEeCCCcEEEEeCCCc
Q 029743 137 FLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~ 155 (188)
.+++...++.|++|++...
T Consensus 305 lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEESSSCCEEEEEEEEC
T ss_pred EEEEECCCCEEEEEeCCcc
Confidence 7888888999999998754
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=8.5e-14 Score=109.75 Aligned_cols=153 Identities=8% Similarity=-0.013 Sum_probs=106.3
Q ss_pred CeeecccCeEEEEeCCC-----cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCe---------------
Q 029743 1 MTFAADAMKLLGTSGDG-----TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT--------------- 60 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------- 60 (188)
++|||||++|+.+..++ .|++||+.+++.+.....+ ..+..++|+|||+.|+.++.++.
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 36999999999876543 8999999998876533222 23678999999999998877655
Q ss_pred -EEEEEeCCcccc-cceeeec-cCCceeEE-eecCCCEEEEecC-----CCeEEEEeccc------Ce-eeeecccCCCc
Q 029743 61 -VLLYSWGYFKDC-SDRFVGL-SPNSVDAL-LKLDEDRVITGSE-----NGLISLVGILP------NR-IIQPIAEHSEY 124 (188)
Q Consensus 61 -i~~~d~~~~~~~-~~~~~~~-~~~~v~~~-~~~~~~~l~~~~~-----d~~v~~~d~~~------~~-~~~~~~~~~~~ 124 (188)
|++|++.+.... ...+... +...+..+ ++|+|++|+..+. +..|++||+.+ +. ....+..+..
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~- 287 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE- 287 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-
Confidence 999999763321 1222220 22335566 8999999887664 56899999986 43 3455555544
Q ss_pred ceeEEEeeCCCCEEEEEeCC----CcEEEEeCCCcc
Q 029743 125 PIESLALSHDRKFLGSISHD----SMLKLWDLDDIL 156 (188)
Q Consensus 125 ~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~ 156 (188)
.+.. .|+++|+.|+..+.. ..|.+||+.+..
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 3444 588899888766543 369999998753
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=1.2e-13 Score=101.14 Aligned_cols=139 Identities=10% Similarity=0.097 Sum_probs=104.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc-----------eeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-----------VQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 69 (188)
|++++...++++|+.+ .+.+|++...+ ..... .+.. |+.++| +++.|+++ .++.|++||++..
T Consensus 43 Lais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl 116 (388)
T 1xip_A 43 LDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEEL 116 (388)
T ss_dssp EEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSST
T ss_pred EEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhh
Confidence 4788999999999886 56679865432 11122 3566 999999 89999998 8899999999764
Q ss_pred ccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEE
Q 029743 70 KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLK 148 (188)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 148 (188)
. ....... +...+..+ +.+. .++++..||.|.+||+..+.... +.. .|++++|+|+| ++.+..||.++
T Consensus 117 ~-~~~~~~~-~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~-~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 117 S-EFRTVTS-FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQ-NVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp T-CEEEEEE-CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEE-SEEEEEECSSE--EEEEETTSCEE
T ss_pred h-ccCccce-eecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccC-CceEEEEcCCc--eEEEEcCCcEE
Confidence 3 3344555 66777776 4332 28888999999999998777643 223 69999999999 67788999999
Q ss_pred EEeCCCcc
Q 029743 149 LWDLDDIL 156 (188)
Q Consensus 149 iwd~~~~~ 156 (188)
+|+.....
T Consensus 186 ~~~~~~~~ 193 (388)
T 1xip_A 186 SFAWRNGE 193 (388)
T ss_dssp EEEEETTE
T ss_pred EEcCCCcc
Confidence 99887655
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.54 E-value=3.8e-14 Score=103.77 Aligned_cols=152 Identities=9% Similarity=-0.076 Sum_probs=102.1
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEE-------------------EEEEeCCCEEEEe-----cC
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTS-------------------VVLMKNGRKVVCG-----SQ 57 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~ 57 (188)
.|+|||++|+.++.++.|++|++.+++.......+...... +.|+|+++.++.. ..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 87 FISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred eECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 58999999999999899999999988765554433332222 2456666665543 34
Q ss_pred CCeEEEEEeCCcccccceeeeccCCceeEE-eec-CCCEEEEecCC------CeEEEEecccCeeeeecccCCCcceeEE
Q 029743 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKL-DEDRVITGSEN------GLISLVGILPNRIIQPIAEHSEYPIESL 129 (188)
Q Consensus 58 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d------~~v~~~d~~~~~~~~~~~~~~~~~v~~~ 129 (188)
+..|.+||+.. +.. ..+.. +...+..+ |+| +++.++..+.+ ..|.+|++..+.............+..+
T Consensus 167 ~~~l~~~d~~~-g~~-~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIET-GEL-EVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CEEEEEEETTT-CCE-EEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred cceEEEEECCC-CcE-Eeecc-CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 56889999875 333 33334 55667777 899 78877665433 4688899876554333332112257889
Q ss_pred EeeCCCCEEEEEeCC-----CcEEEEeCCCcc
Q 029743 130 ALSHDRKFLGSISHD-----SMLKLWDLDDIL 156 (188)
Q Consensus 130 ~~~~~~~~l~~~~~d-----~~i~iwd~~~~~ 156 (188)
+|+|+|++|+.++.+ +.|++||+.+..
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 999999988766543 449999998754
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.53 E-value=1.6e-12 Score=93.36 Aligned_cols=150 Identities=17% Similarity=0.164 Sum_probs=105.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC----CeEEEEEeCCccccccee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~ 76 (188)
++|+|++++++++..++.|++||..+++.......+...+.+++++|+++++++...+ +.|.+||... +.....+
T Consensus 50 ~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-~~~~~~~ 128 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-DNLQDII 128 (333)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS-CSCEEEE
T ss_pred cEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC-CEEEEEE
Confidence 3688999977788888999999998887655443456789999999999988877666 6899999764 2222122
Q ss_pred e--eccCCceeEE-eecCCCEEEEecC------CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEE-EEeCCCc
Q 029743 77 V--GLSPNSVDAL-LKLDEDRVITGSE------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG-SISHDSM 146 (188)
Q Consensus 77 ~--~~~~~~v~~~-~~~~~~~l~~~~~------d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~ 146 (188)
. . ....+..+ ++|+|+++++... .+.|..++..+++........ . .+..++|+|+++.|+ +...++.
T Consensus 129 ~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~-~~~~i~~~~dg~~l~v~~~~~~~ 205 (333)
T 2dg1_A 129 EDLS-TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI-S-VANGIALSTDEKVLWVTETTANR 205 (333)
T ss_dssp CSSS-SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE-S-SEEEEEECTTSSEEEEEEGGGTE
T ss_pred ccCc-cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC-C-cccceEECCCCCEEEEEeCCCCe
Confidence 2 2 33457777 7999988777654 356777776554443322222 2 578899999998665 4456789
Q ss_pred EEEEeCCC
Q 029743 147 LKLWDLDD 154 (188)
Q Consensus 147 i~iwd~~~ 154 (188)
|.+|++.+
T Consensus 206 i~~~d~~~ 213 (333)
T 2dg1_A 206 LHRIALED 213 (333)
T ss_dssp EEEEEECT
T ss_pred EEEEEecC
Confidence 99999863
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.51 E-value=1.2e-13 Score=101.09 Aligned_cols=152 Identities=10% Similarity=-0.041 Sum_probs=103.0
Q ss_pred CeeecccCeEEEEeCC---CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceee
Q 029743 1 MTFAADAMKLLGTSGD---GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 77 (188)
++|||||++|+..... ..|++|++.+++.......+......+.|+|+|+.|+..+.++.|++|++.. +.......
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~-~~~~~~~~ 119 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET-LEEQVIYT 119 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT-CCEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC-CCcEEEEe
Confidence 4689999998877543 4688889888876544333332233478999999999999888999999875 33333333
Q ss_pred eccCCceeE-------------------E-eecCCCEEEEe-----cCCCeEEEEecccCeeeeecccCCCcceeEEEee
Q 029743 78 GLSPNSVDA-------------------L-LKLDEDRVITG-----SENGLISLVGILPNRIIQPIAEHSEYPIESLALS 132 (188)
Q Consensus 78 ~~~~~~v~~-------------------~-~~~~~~~l~~~-----~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~ 132 (188)
. +...... + ++|+++.++.. ..+..|++||+.+++...... +.. .+..+.|+
T Consensus 120 ~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~-~~~~~~~s 196 (396)
T 3c5m_A 120 V-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTA-WLGHPIYR 196 (396)
T ss_dssp C-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESS-CEEEEEEE
T ss_pred c-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCc-ccccceEC
Confidence 2 2222111 2 46677766544 356679999998877654443 323 68899999
Q ss_pred C-CCCEEEEEeCC------CcEEEEeCCCcc
Q 029743 133 H-DRKFLGSISHD------SMLKLWDLDDIL 156 (188)
Q Consensus 133 ~-~~~~l~~~~~d------~~i~iwd~~~~~ 156 (188)
| +++.|+..+.+ ..|.+|++....
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCC
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCc
Confidence 9 78877765543 468899987654
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.50 E-value=4.3e-12 Score=100.09 Aligned_cols=154 Identities=12% Similarity=0.014 Sum_probs=108.8
Q ss_pred CeeecccCeEEEEeCCCc----------------EEEEEcCCCce----eeeecccccceEEEEEEeCCCEEEEecC---
Q 029743 1 MTFAADAMKLLGTSGDGT----------------LSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQ--- 57 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~----------------i~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~--- 57 (188)
++|+|||+.|+.+..++. |++|++.+++. +.....+...+..+.|+|+|++|+..+.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 255 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC 255 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC
Confidence 479999999999887765 99999987652 2222234556789999999999887664
Q ss_pred --CCeEEEEEeCC------cccccceeeeccCCceeEEeecCCCEEEEecC----CCeEEEEecccCee--eeecccCCC
Q 029743 58 --SGTVLLYSWGY------FKDCSDRFVGLSPNSVDALLKLDEDRVITGSE----NGLISLVGILPNRI--IQPIAEHSE 123 (188)
Q Consensus 58 --d~~i~~~d~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----d~~v~~~d~~~~~~--~~~~~~~~~ 123 (188)
+..|++||+.. +......+.. +...+...++|+|+.|+..+. .+.|.+||+.++.. ...+..+..
T Consensus 256 ~~~~~l~~~d~~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 334 (710)
T 2xdw_A 256 DPVNRLWYCDLQQESNGITGILKWVKLID-NFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE 334 (710)
T ss_dssp SSCCEEEEEEGGGSSSSSCSSCCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred CCccEEEEEECcccccccCCccceEEeeC-CCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC
Confidence 56899999864 2224566666 666666668899988776654 33699999987642 234434432
Q ss_pred -cceeEEEeeCCCCEEEEEeCCCc--EEEEeCCCc
Q 029743 124 -YPIESLALSHDRKFLGSISHDSM--LKLWDLDDI 155 (188)
Q Consensus 124 -~~v~~~~~~~~~~~l~~~~~d~~--i~iwd~~~~ 155 (188)
..+..++|++++.++++...++. |.+|++.++
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g 369 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG 369 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC
T ss_pred CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC
Confidence 25788999977777888888874 666777444
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.50 E-value=4.1e-12 Score=89.36 Aligned_cols=149 Identities=9% Similarity=0.137 Sum_probs=107.1
Q ss_pred ee-ecccCeEEEEeC-CCcEEEEEcCCCceeeeec-ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 2 TF-AADAMKLLGTSG-DGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~-s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++ .++++++++... ++.|++|+ .+++.+..+. .+...+.+++++|+++.+++...++.|.+|+.. +..+..+..
T Consensus 83 ~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~ 159 (286)
T 1q7f_A 83 AVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGC 159 (286)
T ss_dssp EEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEEC
T ss_pred EEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCC
Confidence 45 356666665533 78999999 5566655554 334578999999999988887888999999964 344444431
Q ss_pred -ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCC-CcceeEEEeeCCCCEEEEEeCCC-cEEEEeCCC
Q 029743 79 -LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSISHDS-MLKLWDLDD 154 (188)
Q Consensus 79 -~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~ 154 (188)
.+...+..+ ++++|+++++...++.|++|+.. ++.+..+..+. ...+..++++++++++++...++ .|.+|+...
T Consensus 160 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 033456777 79999988888889999999974 55555554331 12578999999998888877775 999999654
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.50 E-value=1.2e-12 Score=94.47 Aligned_cols=140 Identities=14% Similarity=0.167 Sum_probs=98.6
Q ss_pred CeeecccCeEEEEeCC---------------------------CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEE
Q 029743 1 MTFAADAMKLLGTSGD---------------------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV 53 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d---------------------------~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 53 (188)
++|+|||+.|+.++.+ ..|++|++.+++.+..+.. . .+..+.|+|+| .++
T Consensus 109 ~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 109 LEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVV 185 (347)
T ss_dssp EEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEE
T ss_pred eeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEE
Confidence 3699999999888642 5689999988876445544 3 78899999999 777
Q ss_pred EecCCC-------eEEEEEeCCcccccceeeeccCCceeEEeecCCCEEEEecCC--------CeEEEEecccCeeeeec
Q 029743 54 CGSQSG-------TVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSEN--------GLISLVGILPNRIIQPI 118 (188)
Q Consensus 54 ~~~~d~-------~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d--------~~v~~~d~~~~~~~~~~ 118 (188)
++..+. ...+|.++ .+. ...+.. + ..+..+ +|+|++|+.++.+ ..|++|| +++.....
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~-~-~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE-DGK-EEKMFE-K-VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE-TTE-EEEEEE-E-ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred EEecccccccccccccEEEeC-CCc-eEEecc-C-cceeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 775542 44556554 233 344555 4 444444 9999988876643 4688888 56555444
Q ss_pred ccCCCcceeE-EEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 119 AEHSEYPIES-LALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 119 ~~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
..+.. .+.. +.|+ ++ .+++++.++.+++| +.+
T Consensus 259 ~~~~~-~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 259 DEVDR-GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp TTCCS-EEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred ccCCc-ccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 55433 6776 8999 88 88888999999999 873
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.50 E-value=2.4e-12 Score=91.12 Aligned_cols=147 Identities=10% Similarity=0.014 Sum_probs=105.2
Q ss_pred CeeecccC-eEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-
Q 029743 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (188)
Q Consensus 1 l~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~- 78 (188)
++|+|+++ +++++..++.|++|+..++ ...+..+...+.+++++|+|+++++...++.|.+||..+ +........
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~-g~~~~~~~~~ 109 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG-GEWESIADSF 109 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT-CCEEEEECEE
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC-CcEEEEeecc
Confidence 36899998 6777788899999998877 455555677899999999999888877778999999854 232222211
Q ss_pred --ccCCceeEE-eecCCCEEEE----ec-------------CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE
Q 029743 79 --LSPNSVDAL-LKLDEDRVIT----GS-------------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 79 --~~~~~v~~~-~~~~~~~l~~----~~-------------~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
.....+..+ ++|+|+++++ |+ ..+.|..++.. ++.. .+..+.. ....++|+|+++.|
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~-~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDRV-KPNGLAFLPSGNLL 186 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCCS-SEEEEEECTTSCEE
T ss_pred CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCCC-CCccEEECCCCCEE
Confidence 011234556 7999998887 33 13456666655 4433 3333333 57899999999988
Q ss_pred EEEeCCCcEEEEeCC
Q 029743 139 GSISHDSMLKLWDLD 153 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~ 153 (188)
++.+.++.|.+|++.
T Consensus 187 v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 187 VSDTGDNATHRYCLN 201 (296)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEeCCCCeEEEEEEC
Confidence 777778999999986
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.49 E-value=3.1e-12 Score=89.14 Aligned_cols=154 Identities=6% Similarity=-0.062 Sum_probs=108.1
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++++|+|+++++...++.|.+|+..+.............+.+++++++++.+++...++.|.+|+.... ........ .
T Consensus 113 i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~-~ 190 (270)
T 1rwi_B 113 LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-NQVVLPFT-D 190 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-CEEECCCS-S
T ss_pred eEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-ceEeeccc-C
Confidence 467888887777667788999976554433222223346789999999997777777889999998642 22221122 2
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
...+..+ ++++|.++++...++.|.+|+............+.. .+.+++++++|+.+++...++.|+++++...+.
T Consensus 191 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~-~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 191 ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLN-TPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCS-CEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCC-CceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 2456777 689998777777888999999875543332222223 588999999999888888899999999886654
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.49 E-value=1.6e-12 Score=91.45 Aligned_cols=144 Identities=11% Similarity=0.071 Sum_probs=111.9
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeecccc-cceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC-Cc
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-NS 83 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~ 83 (188)
.+++|++++.++.|++||.++++.+..+..+. ..+.++.+.|+|+++++ .++.|..||. + ++.+..+.. .. ..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~-G~~~W~~~~-~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-D-GRELWNIAA-PAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-T-SCEEEEEEC-CTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-C-CCEEEEEcC-CCCcc
Confidence 36789999999999999999999999888665 47899999999998883 4678999997 4 566666665 42 35
Q ss_pred eeEE-eecCCCEEEEecC-CCeEEEEecccCeeeeecccCC-----CcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 84 VDAL-LKLDEDRVITGSE-NGLISLVGILPNRIIQPIAEHS-----EYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 84 v~~~-~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
+.++ +.++|+++++.+. ++.|..++. +++.+..+.... ......+++.++|+++++...++.|.+||.+ ++
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 6666 7899999999887 778888885 677665543111 1145567889999999999999999999987 44
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.48 E-value=4.6e-13 Score=105.37 Aligned_cols=151 Identities=8% Similarity=-0.063 Sum_probs=99.7
Q ss_pred CeeecccCeEEEE-----eCCCcEEEEEcCCCceeeeecccccc--eEEEEEEeCCCEEEEecCCCe-------------
Q 029743 1 MTFAADAMKLLGT-----SGDGTLSVCNLRKNTVQTRSEFSEEE--LTSVVLMKNGRKVVCGSQSGT------------- 60 (188)
Q Consensus 1 l~~s~~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~------------- 60 (188)
++|||||++|+.+ +.+..|++||+.+++.+.. .+... ...++|+|||+.|+.++.+..
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCE
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCE
Confidence 3699999999844 3346899999999876411 11122 268999999999999887765
Q ss_pred EEEEEeCCcccc-cceeee-ccCCceeEE-eecCCCEEEEecCCC----eEEEEecccCeeeeecccCCCcceeEEEeeC
Q 029743 61 VLLYSWGYFKDC-SDRFVG-LSPNSVDAL-LKLDEDRVITGSENG----LISLVGILPNRIIQPIAEHSEYPIESLALSH 133 (188)
Q Consensus 61 i~~~d~~~~~~~-~~~~~~-~~~~~v~~~-~~~~~~~l~~~~~d~----~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 133 (188)
|++|++.+.... ...+.. .+...+..+ ++|+|++|+..+.++ .|++++..++.. ..+..+.. .+....+ +
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~-~~~~~~~-~ 280 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVG-AKYEVHA-W 280 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSS-CCEEEEE-E
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCC-ceEEEEe-c
Confidence 999999764321 112221 023456666 899999998877655 677777655543 34444434 4555666 5
Q ss_pred CCCEEEEEe---CCCcEEEEeCCCcc
Q 029743 134 DRKFLGSIS---HDSMLKLWDLDDIL 156 (188)
Q Consensus 134 ~~~~l~~~~---~d~~i~iwd~~~~~ 156 (188)
++.+++... .++.|.+||+.+..
T Consensus 281 ~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 281 KDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 666444443 25789999997754
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.47 E-value=3.9e-12 Score=89.45 Aligned_cols=148 Identities=7% Similarity=-0.013 Sum_probs=113.0
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeeccc-ccceEEEEEEeCCCEEEEecC-CCeEEEEEeCCcccccceeeec
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKDCSDRFVGL 79 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~ 79 (188)
.++|+|++++ +.++.|+.||. +++.+..+..+ ...+.++.+.++|+.+++.+. ++.+..++. .++.+..+...
T Consensus 43 ~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~--~Gk~l~~~~~~ 117 (276)
T 3no2_A 43 AATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM--KGEVLSKTEFE 117 (276)
T ss_dssp EECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT--TSCEEEEEEEC
T ss_pred EECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC--CCCEEEEEecc
Confidence 5789999888 34678999998 78888888754 357888999999999998877 666666664 34555444320
Q ss_pred -----cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 80 -----SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 80 -----~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
+......+ ..++|+++++...++.|..||.. |+.+.++... . .+.++.+.++++.++++..++.|..+|..
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-G-TPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-S-CCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-C-CccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 11123333 57899999999999999999987 9988888765 3 46778889999999988888889999988
Q ss_pred CccC
Q 029743 154 DILK 157 (188)
Q Consensus 154 ~~~~ 157 (188)
+++.
T Consensus 195 tG~~ 198 (276)
T 3no2_A 195 SNRI 198 (276)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 6654
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.46 E-value=2.9e-12 Score=92.39 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=93.1
Q ss_pred CeeecccCeEEEEeCC---C--cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC-----------------
Q 029743 1 MTFAADAMKLLGTSGD---G--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----------------- 58 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d---~--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------- 58 (188)
++|||||++|+.++.+ + .|++|++.+++....... .. +..++|+|+|+.|+.++.+
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 3699999999988654 2 478888888776554443 33 9999999999988887632
Q ss_pred ----------CeEEEEEeCCcccccceeeeccCCceeEE-eecCCCEEEEecCCC-------eEEEEecccCeeeeeccc
Q 029743 59 ----------GTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENG-------LISLVGILPNRIIQPIAE 120 (188)
Q Consensus 59 ----------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~-------~v~~~d~~~~~~~~~~~~ 120 (188)
..|.+||+.. +..+..+.. . .+..+ |+|+| +++++..+. ...||.+.+++. ..+..
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~-~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~ 215 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTES-EEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFE 215 (347)
T ss_dssp --------CEEEEEEEETTT-TEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEE
T ss_pred cCcccccCccceEEEEECCC-CeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEecc
Confidence 4688888865 343244554 3 56666 89999 777775432 334444445543 33433
Q ss_pred CCCcceeEEEeeCCCCEEEEEeCC--------CcEEEEe
Q 029743 121 HSEYPIESLALSHDRKFLGSISHD--------SMLKLWD 151 (188)
Q Consensus 121 ~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd 151 (188)
+ . .+..+ +|+|++|+.++.+ ..|.+||
T Consensus 216 ~-~-~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 216 K-V-SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp E-E-SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred C-c-ceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 3 3 45544 9999998877644 3678888
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.45 E-value=1.3e-11 Score=88.82 Aligned_cols=150 Identities=10% Similarity=-0.002 Sum_probs=105.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccc-----cceEEEEEEeCCCEEEEec--CCCeEEEEEeCCccccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-----EELTSVVLMKNGRKVVCGS--QSGTVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~ 73 (188)
++++++++.+++...++.|.+||..+++....+.... .....+++ . +..++++. .++.|.++|..+ +...
T Consensus 89 i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t-~~~~ 165 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTET-DKVV 165 (328)
T ss_dssp EEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTT-TEEE
T ss_pred EEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCC-CeEE
Confidence 4677888544444378999999999988776665322 14567777 3 44555544 478999999976 3555
Q ss_pred ceeeeccCCceeEE-eecCCCEEEEecCC----------CeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 74 DRFVGLSPNSVDAL-LKLDEDRVITGSEN----------GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 74 ~~~~~~~~~~v~~~-~~~~~~~l~~~~~d----------~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
..+.. .. ....+ ++|+|+++++...+ +.|.++|..+++....+....+.....++|+|+++.|+++.
T Consensus 166 ~~i~~-g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 166 DELTI-GI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp EEEEC-SS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred EEEEc-CC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 55543 33 33455 78999877776654 78999999988877666543222578999999999888775
Q ss_pred CCCcEEEEeCCCccC
Q 029743 143 HDSMLKLWDLDDILK 157 (188)
Q Consensus 143 ~d~~i~iwd~~~~~~ 157 (188)
. .|.+||+.+...
T Consensus 244 ~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 244 N--DIWRMPVEADRV 256 (328)
T ss_dssp S--SEEEEETTCSSC
T ss_pred c--EEEEEECCCCce
Confidence 4 899999987664
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.45 E-value=5.6e-12 Score=91.95 Aligned_cols=143 Identities=12% Similarity=0.099 Sum_probs=104.8
Q ss_pred cccCeEEEEe------CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC----------CCeEEEEEeCC
Q 029743 5 ADAMKLLGTS------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ----------SGTVLLYSWGY 68 (188)
Q Consensus 5 ~~~~~l~~~~------~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~~d~~~ 68 (188)
++++++++.. .|+.|++||..+++.+..++.+..+ .++|+|+++++++++. ++.|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4677777764 3679999999999888888765554 8999999999998863 56799999875
Q ss_pred cccccceeeecc------CCceeEE-eecCCCEEEEecC--CCeEEEEecccCeeeee-cccCCCcceeEEEeeCCC-CE
Q 029743 69 FKDCSDRFVGLS------PNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDR-KF 137 (188)
Q Consensus 69 ~~~~~~~~~~~~------~~~v~~~-~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~~ 137 (188)
.+.+..+.. . ......+ ++|+|++|+++.. ++.|.+||+.+++.+.. +... + ...+.+.|++ ..
T Consensus 91 -~~~~~~i~~-~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~--~~~v~~~p~~~~~ 165 (361)
T 2oiz_A 91 -LTFEKEISL-PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G--CWSVIPQPNRPRS 165 (361)
T ss_dssp -CCEEEEEEE-CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T--EEEEEECTTSSSE
T ss_pred -CcEEEEEEc-CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C--cceeEEcCCCCee
Confidence 355555542 2 1234455 7999999998863 57899999999988877 6543 2 2335566765 56
Q ss_pred EEEEeCCCcEEEEeCCC
Q 029743 138 LGSISHDSMLKLWDLDD 154 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~ 154 (188)
+++.+.||.+.+|++..
T Consensus 166 ~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 166 FMTICGDGGLLTINLGE 182 (361)
T ss_dssp EEEEETTSSEEEEEECT
T ss_pred EEEECCCCcEEEEEECC
Confidence 66777788888887754
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.45 E-value=1.3e-11 Score=94.80 Aligned_cols=150 Identities=9% Similarity=0.033 Sum_probs=109.3
Q ss_pred cccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeC-CcccccceeeeccCCc
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG-YFKDCSDRFVGLSPNS 83 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~ 83 (188)
|.+.++++...++.|.++|..+++.+..+.. ...+..+.++|+|+++++++.++.|.+||+. .....+..+.. . ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G-~~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-G-SE 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-C-SE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-C-CC
Confidence 4444566667789999999999998888763 3467799999999999999999999999995 12345555543 3 33
Q ss_pred eeEE-ee----cCCCEEEEecC-CCeEEEEecccCeeeeecccCC----------C------------------------
Q 029743 84 VDAL-LK----LDEDRVITGSE-NGLISLVGILPNRIIQPIAEHS----------E------------------------ 123 (188)
Q Consensus 84 v~~~-~~----~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~----------~------------------------ 123 (188)
...+ ++ |+|+++++++. .+.|.++|..+.+.+..+.... .
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 4566 78 69999888774 5899999988776655432110 0
Q ss_pred --------------------cceeEEEeeCCCCEEEEEe-CCCcEEEEeCCCccC
Q 029743 124 --------------------YPIESLALSHDRKFLGSIS-HDSMLKLWDLDDILK 157 (188)
Q Consensus 124 --------------------~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~ 157 (188)
....++.|+|++++++++. .++.|.++|+.+.+.
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 0123567999999887655 578999999988653
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.43 E-value=1.9e-11 Score=85.13 Aligned_cols=152 Identities=7% Similarity=-0.034 Sum_probs=104.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
|+++++++++++.. ++.|.+|+................+.++++.++++.+++...++.|.+|+.... ........ .
T Consensus 72 i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~~~~~~~-~ 148 (270)
T 1rwi_B 72 LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK-TQTVLPFT-G 148 (270)
T ss_dssp EEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC-SCEECCCC-S
T ss_pred eEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc-eeEeeccc-c
Confidence 46788888665555 889999997765433222123356899999999998777777889999975431 11111112 2
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
...+..+ ++++|+++++...++.|.+|+............+.. .+.+++++++|..+++...++.|.+|+.....
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT-APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC-SEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCC-CceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 2345667 689999777777788999999876654433322223 68899999999777777778899999987643
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.43 E-value=2.6e-11 Score=85.75 Aligned_cols=150 Identities=8% Similarity=0.016 Sum_probs=103.2
Q ss_pred CeeecccCeEEEE----e-------------CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEE
Q 029743 1 MTFAADAMKLLGT----S-------------GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 1 l~~s~~~~~l~~~----~-------------~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
++++|+|+++++. + ..+.|..++.. ++. ..+..+......++|+|+++.+++.+.++.|.+
T Consensus 120 i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 120 VCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHR 197 (296)
T ss_dssp EEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEE
Confidence 4678999888863 2 12456666654 443 333445567789999999998877778899999
Q ss_pred EEeCCcccc---cceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEe-eCCCCEE
Q 029743 64 YSWGYFKDC---SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLAL-SHDRKFL 138 (188)
Q Consensus 64 ~d~~~~~~~---~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l 138 (188)
|++...+.. ...+.. +...+..+ ++++|+++++. ++.|.+|+.. ++.+..+..+.. +.+++| .|+++.|
T Consensus 198 ~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~--~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 198 YCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT--TSNLCFGGPEGRTL 271 (296)
T ss_dssp EEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC--CCEEEEESTTSCEE
T ss_pred EEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC--ceeEEEECCCCCEE
Confidence 999632332 223322 34445667 78999876666 7889999986 777777776633 889999 5888888
Q ss_pred EEEeCCCcEEEEeCCCccCCC
Q 029743 139 GSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~~~~ 159 (188)
++++.+ .+..++.++...+.
T Consensus 272 ~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 272 YMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp EEEETT-EEEEEECSCCBCCC
T ss_pred EEEcCC-eEEEEEcccccccc
Confidence 887765 46666776655544
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.42 E-value=7.4e-12 Score=89.88 Aligned_cols=148 Identities=11% Similarity=0.066 Sum_probs=107.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
++|+|++..++..+.++.++.| .++....+..+...+.+++|+|++++++++..++.|.+||... +........ +
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~~~~~~~~~-~ 85 (333)
T 2dg1_A 11 LFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET-KEIKRPFVS-H 85 (333)
T ss_dssp CCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEEC-S
T ss_pred eeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC-CcEEEEeeC-C
Confidence 4688888888777778889888 3455556666667789999999999888888899999999864 333333334 5
Q ss_pred CCceeEE-eecCCCEEEEecCC----CeEEEEecccCeeeeecc--cCCCcceeEEEeeCCCCEEEEEeC------CCcE
Q 029743 81 PNSVDAL-LKLDEDRVITGSEN----GLISLVGILPNRIIQPIA--EHSEYPIESLALSHDRKFLGSISH------DSML 147 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d----~~v~~~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~------d~~i 147 (188)
...+.++ ++|+|+++++...+ +.|.+||..++.....+. .. ...+..++++|+++++++... .+.|
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST-AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS-CCCEEEEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc-CCcccceEECCCCCEEEEeccccccCCCceE
Confidence 5678888 78999988877666 689999988766542332 12 236899999999987776653 3566
Q ss_pred EEEeCCC
Q 029743 148 KLWDLDD 154 (188)
Q Consensus 148 ~iwd~~~ 154 (188)
..++..+
T Consensus 165 ~~~~~~~ 171 (333)
T 2dg1_A 165 YYVSPDF 171 (333)
T ss_dssp EEECTTS
T ss_pred EEEeCCC
Confidence 6676654
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=6.6e-12 Score=91.90 Aligned_cols=127 Identities=9% Similarity=0.055 Sum_probs=97.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
|+| ++++|+++ .++.|++||+.+.........|..++.++.+.+. .++++..||.+.+||+... ... . +
T Consensus 93 l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~-~~~----~-~ 161 (388)
T 1xip_A 93 VCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTK-STK----Q-L 161 (388)
T ss_dssp EEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTC-CEE----E-E
T ss_pred EEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCC-ccc----c-c
Confidence 356 88999998 7899999999876555556667778888777654 3888999999999999753 322 2 3
Q ss_pred CCceeEE-eecCCCEEEEecCCCeEEEEecccCee--eeec------c---cCCCcceeEEEeeCCCCEEEEE
Q 029743 81 PNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI--IQPI------A---EHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~------~---~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
...++|+ |+|+| ++.|..||.+++|+...+.. ..++ . +|. ..|.++.|.+++.++++-
T Consensus 162 ~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~-~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 162 AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEE-YSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTT-SEEEEEEESSSSEEEEEE
T ss_pred cCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCC-eeEEEEEEecCCeEEEEE
Confidence 4578999 89999 67888999999999887764 4445 2 243 479999999999988753
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.40 E-value=3.8e-11 Score=94.54 Aligned_cols=149 Identities=9% Similarity=-0.013 Sum_probs=101.5
Q ss_pred CeeecccCeEEEEeCCCc-------------EEEEEcCCCc----eeeeecccccceEEEEEEeCCCEEEEecCCC----
Q 029743 1 MTFAADAMKLLGTSGDGT-------------LSVCNLRKNT----VQTRSEFSEEELTSVVLMKNGRKVVCGSQSG---- 59 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~-------------i~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 59 (188)
++|+|||+.|+.++.+.. |++|++.++. ++.....+...+.++.|+|+|++|+..+.++
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 579999999999988766 9999998775 3333334556789999999999988776655
Q ss_pred eEEEEEeCCcccccceeeeccCCceeEEeecCCCEEEEec---CCCeEEEEecccCee--eeecccCC-CcceeEEEeeC
Q 029743 60 TVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGS---ENGLISLVGILPNRI--IQPIAEHS-EYPIESLALSH 133 (188)
Q Consensus 60 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~---~d~~v~~~d~~~~~~--~~~~~~~~-~~~v~~~~~~~ 133 (188)
.|.+++.. ......+.. +.......+.++|.+++... .++.|.+||+.++.. ...+..+. ...+..++|+
T Consensus 253 ~l~~~~~~--~~~~~~l~~-~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 253 DVYWKRPG--EKDFRLLVK-GVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEECTT--CSSCEEEEE-CSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred EEEEEcCC--CCceEEeec-CCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 55555443 234555665 55555555446777434433 257899999987653 22333222 3357888888
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q 029743 134 DRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 134 ~~~~l~~~~~d~~i~iwd~~ 153 (188)
++..+++...|+..++|.+.
T Consensus 329 ~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 329 GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp TTEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEEEECCEEEEEEEe
Confidence 66778888889888877554
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=8.5e-11 Score=86.06 Aligned_cols=156 Identities=11% Similarity=0.000 Sum_probs=108.6
Q ss_pred CeeecccCeEEEEe----------CCCcEEEEEcCCCceeeeeccc-------ccceEEEEEEeCCCEEEEecC--CCeE
Q 029743 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (188)
Q Consensus 1 l~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i 61 (188)
+++||||++++.+. .++.|.++|..+.+.+..+... ......++|+|+|++|++++. ++.|
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v 150 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE
Confidence 57999999999886 3678999999988777665421 123568999999999998874 4779
Q ss_pred EEEEeCCcccccce-eee----------------------------------c---------------c------C----
Q 029743 62 LLYSWGYFKDCSDR-FVG----------------------------------L---------------S------P---- 81 (188)
Q Consensus 62 ~~~d~~~~~~~~~~-~~~----------------------------------~---------------~------~---- 81 (188)
.++| .+. +.+.. +.. . + .
T Consensus 151 ~viD-~t~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 151 GLVV-QGG-SSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIV 228 (373)
T ss_pred EEEE-CCC-CEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEE
Confidence 9998 653 22222 100 0 0 0
Q ss_pred --------------------------------------CceeEE-eecCCCEEEEecC----------CCeEEEEecccC
Q 029743 82 --------------------------------------NSVDAL-LKLDEDRVITGSE----------NGLISLVGILPN 112 (188)
Q Consensus 82 --------------------------------------~~v~~~-~~~~~~~l~~~~~----------d~~v~~~d~~~~ 112 (188)
.....+ ++|+++.++++.. .+.|.++|+.++
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 000002 3556666665432 357999999999
Q ss_pred eeeeecccCCCcceeEEEeeCCCC-EEEEEe-CCCcEEEEeCCCccCCCC
Q 029743 113 RIIQPIAEHSEYPIESLALSHDRK-FLGSIS-HDSMLKLWDLDDILKGSG 160 (188)
Q Consensus 113 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~iwd~~~~~~~~~ 160 (188)
+.+..+... . ...+++|+|||+ .++++. .++.|.++|+.+.+....
T Consensus 309 ~vv~~i~~g-~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 309 QTSSQISLG-H-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEEEEEECC-C-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 988888654 3 578999999999 677776 589999999998776544
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.40 E-value=1.1e-11 Score=98.27 Aligned_cols=149 Identities=11% Similarity=0.085 Sum_probs=100.3
Q ss_pred eeecccCeEEEEeCC-----CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCe--------------EE
Q 029743 2 TFAADAMKLLGTSGD-----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGT--------------VL 62 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~ 62 (188)
+|||||++|+.+..+ ..|++||+.+++.+... .+...+..++|+|| +.|+.+..++. |+
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEE
Confidence 699999999887653 36999999998775431 12223468899999 98888776543 88
Q ss_pred EEEeCCcccc-cceeeeccC--CceeEE-eecCCCEEEEecCC-----CeEEEEecccC--eeeeecccCCCcceeEEEe
Q 029743 63 LYSWGYFKDC-SDRFVGLSP--NSVDAL-LKLDEDRVITGSEN-----GLISLVGILPN--RIIQPIAEHSEYPIESLAL 131 (188)
Q Consensus 63 ~~d~~~~~~~-~~~~~~~~~--~~v~~~-~~~~~~~l~~~~~d-----~~v~~~d~~~~--~~~~~~~~~~~~~v~~~~~ 131 (188)
+|++.+.... ...+.. .. ..+..+ ++|+|++|+..+.+ ..|++||+.++ ++...+..+.. .+... +
T Consensus 247 ~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~-~ 323 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-AQWDF-V 323 (741)
T ss_dssp EEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-SCEEE-E
T ss_pred EEECCCCchhCEEEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-ceEEE-E
Confidence 8998653321 122222 22 235666 89999988877644 37999999876 31445544444 34444 3
Q ss_pred eCCCCEEEEEeCC----CcEEEEeCCCc
Q 029743 132 SHDRKFLGSISHD----SMLKLWDLDDI 155 (188)
Q Consensus 132 ~~~~~~l~~~~~d----~~i~iwd~~~~ 155 (188)
.|+++.|+..+.+ +.|.+||+.+.
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 4888888777653 45999998764
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.34 E-value=1.6e-10 Score=82.13 Aligned_cols=150 Identities=8% Similarity=0.072 Sum_probs=102.4
Q ss_pred CeeecccCeEEEEeCC---------------CcEEEEEcCCCceeeeecccccceEEEEEE----eCCCEEEEe-cCCCe
Q 029743 1 MTFAADAMKLLGTSGD---------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLM----KNGRKVVCG-SQSGT 60 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d---------------~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~ 60 (188)
++++|+|+++++...+ +.|..++.. ++..... .+......++++ |+++.++.+ ..++.
T Consensus 122 i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 122 CAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred EEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 3577888877776554 467777765 5443322 234456889999 999765554 56789
Q ss_pred EEEEEeCCccc-----ccceeeeccC-CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeC
Q 029743 61 VLLYSWGYFKD-----CSDRFVGLSP-NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSH 133 (188)
Q Consensus 61 i~~~d~~~~~~-----~~~~~~~~~~-~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 133 (188)
|.+|++...+. ....+.. +. ..+..+ ++++|+++++...++.|.+||.++++.+..+..+.. .+.+++|++
T Consensus 200 i~~~~~~~~g~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~i~~~~ 277 (314)
T 1pjx_A 200 LWSYDIKGPAKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE-KPSNLHFKP 277 (314)
T ss_dssp EEEEEEEETTEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS-CEEEEEECT
T ss_pred EEEEECCCCCccccceEEEECCC-CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC-CceeEEECC
Confidence 99999752122 1112222 22 445667 689998888877788999999987776666655534 689999999
Q ss_pred CCCEEE-EEeCCCcEEEEeCCC
Q 029743 134 DRKFLG-SISHDSMLKLWDLDD 154 (188)
Q Consensus 134 ~~~~l~-~~~~d~~i~iwd~~~ 154 (188)
+++.|. +...++.|..|++..
T Consensus 278 dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 278 QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEeCCCCeEEEEeCCC
Confidence 999554 445668999999874
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.31 E-value=5.1e-10 Score=86.07 Aligned_cols=152 Identities=11% Similarity=0.064 Sum_probs=104.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcC--CCceeeeecccccceEEEEEE----eCCCEEEEecC-CCeEEEEEeCCccccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLR--KNTVQTRSEFSEEELTSVVLM----KNGRKVVCGSQ-SGTVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~i~~~d~~~~~~~~ 73 (188)
+.|||||+++++++.++.|.+||+. +++.+..+.. ......++|+ |+|+++++++. .+++.++|..+ .+.+
T Consensus 202 v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t-~~~~ 279 (567)
T 1qks_A 202 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPK 279 (567)
T ss_dssp EEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-CCEE
T ss_pred eEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC-CcEE
Confidence 4689999999999999999999995 7777777764 3346799999 69998887665 48899999754 2222
Q ss_pred ceeee---------------------cc---------------------------------CCceeEE-eecCCCEEEEe
Q 029743 74 DRFVG---------------------LS---------------------------------PNSVDAL-LKLDEDRVITG 98 (188)
Q Consensus 74 ~~~~~---------------------~~---------------------------------~~~v~~~-~~~~~~~l~~~ 98 (188)
+.+.- .+ ......+ |+|+|++++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 22210 00 0112244 78899988765
Q ss_pred c-CCCeEEEEecccCeeeeeccc-CCC-cceeEEE-eeCCCCEE-EEEe-CCCcEEEEeCCC
Q 029743 99 S-ENGLISLVGILPNRIIQPIAE-HSE-YPIESLA-LSHDRKFL-GSIS-HDSMLKLWDLDD 154 (188)
Q Consensus 99 ~-~d~~v~~~d~~~~~~~~~~~~-~~~-~~v~~~~-~~~~~~~l-~~~~-~d~~i~iwd~~~ 154 (188)
. .++.|.++|+.+++.+..+.. ... .+-..+. ++|++..+ ++.. .++.|.++|..+
T Consensus 360 ~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 360 ANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred eCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 5 678999999999987766544 111 0112233 58875544 4443 468999999886
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.31 E-value=3.3e-10 Score=81.51 Aligned_cols=145 Identities=7% Similarity=0.027 Sum_probs=102.5
Q ss_pred cCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC-----
Q 029743 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP----- 81 (188)
Q Consensus 7 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~----- 81 (188)
++.+++...++.|.++|..+++.+..+. .......++++++++..++...++.|.+||..+ ......+.. ..
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t-~~~~~~i~~-g~~~~~~ 130 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKT-YEITGYIEC-PDMDMES 130 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTT-TEEEEEEEC-TTCCTTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCC-CeEEEEEEc-CCccccC
Confidence 3444555557899999999999888775 346788999999985444444789999999876 344444442 22
Q ss_pred CceeEEeecCCCEEEEec--CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCC----------CcEEE
Q 029743 82 NSVDALLKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD----------SMLKL 149 (188)
Q Consensus 82 ~~v~~~~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~i 149 (188)
.....+.. ++..++++. .++.|.++|+.+++.+..+... . ....++++|+|++++++..+ +.|.+
T Consensus 131 ~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 131 GSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-I-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp CBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-S-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred CCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-C-CccceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 13444522 344554444 4889999999999888777654 2 46789999999877776554 78999
Q ss_pred EeCCCccC
Q 029743 150 WDLDDILK 157 (188)
Q Consensus 150 wd~~~~~~ 157 (188)
+|..+...
T Consensus 208 id~~t~~v 215 (328)
T 3dsm_A 208 IDAETFTV 215 (328)
T ss_dssp EETTTTEE
T ss_pred EECCCCeE
Confidence 99987653
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.30 E-value=4.8e-10 Score=88.93 Aligned_cols=149 Identities=15% Similarity=0.091 Sum_probs=101.5
Q ss_pred CeeecccCeEEEEeCCCc--------------EEEEEcCCCce----eeeecccccceEEEEEEeCCCEEEEecCC----
Q 029743 1 MTFAADAMKLLGTSGDGT--------------LSVCNLRKNTV----QTRSEFSEEELTSVVLMKNGRKVVCGSQS---- 58 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~--------------i~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---- 58 (188)
++|+|| +.|+.+..++. |++|++.++.. +.....+...+..+.|+|+|++|+..+.+
T Consensus 214 ~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 292 (741)
T 1yr2_A 214 LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDP 292 (741)
T ss_dssp CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCS
T ss_pred EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCC
Confidence 479999 99988876554 88999877642 22222333458899999999988877654
Q ss_pred -CeEEEEEeCCcccc-cceeeeccCCceeEEeecCCCEEEEecC----CCeEEEEecccC--eeeeecccCCCcceeEEE
Q 029743 59 -GTVLLYSWGYFKDC-SDRFVGLSPNSVDALLKLDEDRVITGSE----NGLISLVGILPN--RIIQPIAEHSEYPIESLA 130 (188)
Q Consensus 59 -~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~l~~~~~----d~~v~~~d~~~~--~~~~~~~~~~~~~v~~~~ 130 (188)
..|++||+..+... ...+.. +.......++|+|+.|+..+. ++.|.+||+.++ .....+..+.. .+..+.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~-~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~ 370 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIP-DLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVG 370 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEE
T ss_pred cceEEEEECCCCCCcccEEecC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEE
Confidence 38999999753223 556665 555555556789998887765 345999998874 33333444433 567788
Q ss_pred eeCCCCEEEEEeCCCcEEEEeCC
Q 029743 131 LSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 131 ~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
+. ++..+++...++..+||.+.
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEE
T ss_pred EE-CCEEEEEEEECCEEEEEEEe
Confidence 87 55677788888877776543
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.28 E-value=1.1e-09 Score=77.03 Aligned_cols=146 Identities=8% Similarity=-0.002 Sum_probs=102.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCce-eeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce-eee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR-FVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~ 78 (188)
++++++++++++...++.|..|+.. ++. ...+......+.++++.++++.+++...++.|..||. . +..... ...
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~-g~~~~~~~~~ 138 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D-GKIREYELPN 138 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSS
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C-CCEEEecCCC
Confidence 3567888877776667889999976 332 2222234457899999999988888777889999987 3 222211 122
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeee-cccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
....+..+ +.++|+++++...++.|..||. +++.... +..... .+..+++.+++..+++...++.|.+|+.
T Consensus 139 -~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 139 -KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPAS-GPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp -TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC-CEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred -CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCC-cceeEEECCCCCEEEEccCCceEEEECC
Confidence 33456777 6889988887777889999998 6654432 222223 5789999999987776666889999998
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.25 E-value=1.9e-09 Score=75.79 Aligned_cols=147 Identities=5% Similarity=-0.060 Sum_probs=103.2
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeee-ecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce-eee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR-SEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR-FVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~ 78 (188)
++++|+++++++...++.|.+|+. +++.... .......+..+++.++++..++...++.|..||. . +..... +..
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~ 180 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDITEFKIPT 180 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSS
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCC
Confidence 356788887777767789999998 5544322 2334457899999999988887777789999987 3 333221 222
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeee-cccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
....+..+ +.++|+++++...++.|.+|+. ++..... +..+.. .+.+++++++|+.+++...++.|..||..
T Consensus 181 -~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 181 -PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNA-RPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp -TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC-CEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred -CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCC-CceeEEECCCCCEEEeccCCceEEEECCC
Confidence 33456677 6889987777777889999998 6653322 222323 68899999999876666577899999984
No 203
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=8.4e-10 Score=80.66 Aligned_cols=144 Identities=10% Similarity=-0.067 Sum_probs=102.5
Q ss_pred eecccCeEEEEeC-----CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec----------CCCeEEEEEeC
Q 029743 3 FAADAMKLLGTSG-----DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWG 67 (188)
Q Consensus 3 ~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~ 67 (188)
..|+++.++.... ++.|.++|..+++.+..++.-..+ . ++++|+|+++++++ .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 4689999988865 579999999999998888744444 4 99999999988776 35689999997
Q ss_pred CcccccceeeeccC-------CceeEE-eecCCCEEEEecC--CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCE
Q 029743 68 YFKDCSDRFVGLSP-------NSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF 137 (188)
Q Consensus 68 ~~~~~~~~~~~~~~-------~~v~~~-~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 137 (188)
+ .+.+..+.- .. .....+ ++|||++++++.. ++.|.++|+.+++.+.++... + . ...+....+.
T Consensus 118 t-~~v~~~I~v-~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g--~-~~~~P~g~~~ 191 (386)
T 3sjl_D 118 T-LLPTADIEL-PDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D--C-YHIFPTAPDT 191 (386)
T ss_dssp T-CCEEEEEEE-TTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S--E-EEEEEEETTE
T ss_pred C-CeEEEEEEC-CCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C--c-ceeecCCCce
Confidence 6 455555532 21 134445 8999999888763 689999999999998888643 2 1 1222223344
Q ss_pred EEEEeCCCcEEEEeCCC
Q 029743 138 LGSISHDSMLKLWDLDD 154 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~ 154 (188)
+++.+.||.+.+.++.+
T Consensus 192 ~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEETTSCEEEEECCS
T ss_pred eEEECCCCCEEEEECCC
Confidence 55556666666666654
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.24 E-value=7.6e-10 Score=82.02 Aligned_cols=150 Identities=14% Similarity=0.034 Sum_probs=99.4
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCC--eEEEEEeCCccccccee--
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSDRF-- 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~-- 76 (188)
|+|+|+++++++...++.|++||..++......... .... ++|+++++.|+++..++ .|.+++.... .....+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~-~~~~~~g~ 212 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG-WAPTRIGQ 212 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-TCEEEEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC-ceeEEeee
Confidence 478899987777777789999999887765544432 3334 99999999998888765 7888887532 222223
Q ss_pred --eeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeee----cccCCCccee-EEEeeCC-CCEEEEEeCCCcE
Q 029743 77 --VGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQP----IAEHSEYPIE-SLALSHD-RKFLGSISHDSML 147 (188)
Q Consensus 77 --~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~----~~~~~~~~v~-~~~~~~~-~~~l~~~~~d~~i 147 (188)
.. ....+.++ ++|++..|+.+..++.|+.||..++..... ..+....... .++|+|+ +.++++-...+.|
T Consensus 213 ~~~~-~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 213 LGST-FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp CCTT-SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred ccch-hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 11 22345556 688555555577788999999887653322 2222221113 8999995 5555565677899
Q ss_pred EEEeCCC
Q 029743 148 KLWDLDD 154 (188)
Q Consensus 148 ~iwd~~~ 154 (188)
+.|+...
T Consensus 292 ~~~~~~g 298 (409)
T 3hrp_A 292 YKITPDG 298 (409)
T ss_dssp EEECTTC
T ss_pred EEEecCC
Confidence 9998764
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.23 E-value=8.2e-10 Score=78.25 Aligned_cols=139 Identities=8% Similarity=0.013 Sum_probs=91.6
Q ss_pred CeeecccCeEEEEeCC---------CcEEEEEcCC-CceeeeecccccceEEEEEEeCCCEEE-EecCCCeEEEEEeC-C
Q 029743 1 MTFAADAMKLLGTSGD---------GTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWG-Y 68 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d---------~~i~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~-~ 68 (188)
++++|+|+++++.... ..-.+|.+.. ++... +.........++|+|+++.|+ +.+.++.|.+|+++ .
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~ 181 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ 181 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCC
Confidence 3578899876654321 2234454432 33322 333344578999999998765 45567899999984 2
Q ss_pred cccc-----cceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEee-CCCCEEEEE
Q 029743 69 FKDC-----SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALS-HDRKFLGSI 141 (188)
Q Consensus 69 ~~~~-----~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~ 141 (188)
.+.. ...+.. ....+..+ +.++|++.++....+.|..||..+++.+..+..+.. .+++++|. |+++.|..+
T Consensus 182 ~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~-~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 182 TGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD-KTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp TCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS-BEEEEEEESGGGCEEEEE
T ss_pred CCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC-CceEEEEeCCCCCEEEEE
Confidence 2221 111122 23455667 689998888777788999999988998888877644 68999998 888877555
Q ss_pred e
Q 029743 142 S 142 (188)
Q Consensus 142 ~ 142 (188)
+
T Consensus 260 ~ 260 (297)
T 3g4e_A 260 C 260 (297)
T ss_dssp E
T ss_pred c
Confidence 4
No 206
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.23 E-value=2.1e-12 Score=94.48 Aligned_cols=144 Identities=11% Similarity=0.101 Sum_probs=82.1
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC-Cce
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-NSV 84 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~v 84 (188)
++..+++++.|+.|+.||..+|+.+..+.. ..+.+..+..++..+++++.|+.|+.||..+ ++.+..+.. +. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t-G~~~w~~~~-~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN-NEGLTKLPF-TIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC------CCSEECSC-CHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCC-Cceeeeeec-cCcccc
Confidence 578899999999999999999999888775 4555555566777888888999999999875 444444332 21 111
Q ss_pred eEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 85 DAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 85 ~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
.+. +...+..+++++.++.|+.||.++|+.+..+..+. ...++|++..+++++.++.|+.||.+++...
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 111 11145577788889999999999999888776552 1345668888999999999999999887654
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.19 E-value=7.2e-10 Score=87.34 Aligned_cols=151 Identities=10% Similarity=0.098 Sum_probs=96.2
Q ss_pred eeecccCeEEEEeC-----CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCC-------------eEEE
Q 029743 2 TFAADAMKLLGTSG-----DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG-------------TVLL 63 (188)
Q Consensus 2 ~~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~~ 63 (188)
+|||||++||.+.. ...|+++|+.+++.+.... +......++|+ |++.|+.+..+. .|++
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence 69999999986532 2579999999988654311 11123678999 999998887763 4999
Q ss_pred EEeCCcccccceeeeccC---CceeEE-eecCCCEEEEec----CCCeEEEEecccCe-eeeecccCCCcceeEEEeeCC
Q 029743 64 YSWGYFKDCSDRFVGLSP---NSVDAL-LKLDEDRVITGS----ENGLISLVGILPNR-IIQPIAEHSEYPIESLALSHD 134 (188)
Q Consensus 64 ~d~~~~~~~~~~~~~~~~---~~v~~~-~~~~~~~l~~~~----~d~~v~~~d~~~~~-~~~~~~~~~~~~v~~~~~~~~ 134 (188)
|++.+....-..+..... .....+ ++|+|++|+... ..+.|+++|+.++. ....+..+.+ ..... ++++
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-~~~~~-~~~~ 290 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-ADVSL-VDNK 290 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-SCEEE-EEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-ceEEE-Eecc
Confidence 998764332222222021 124455 799999886543 23589999997763 3445555544 34444 6666
Q ss_pred CCEEEEEe-CC---CcEEEEeCCCcc
Q 029743 135 RKFLGSIS-HD---SMLKLWDLDDIL 156 (188)
Q Consensus 135 ~~~l~~~~-~d---~~i~iwd~~~~~ 156 (188)
+..|+..+ .+ +.|..+++.+..
T Consensus 291 g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 291 GSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 66655443 33 578999988754
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.18 E-value=1.6e-09 Score=77.08 Aligned_cols=145 Identities=13% Similarity=0.015 Sum_probs=99.0
Q ss_pred eeecccC-eEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc
Q 029743 2 TFAADAM-KLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 2 ~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
+|+|+++ ++++...++.|..|+. +++. ..+..+...+..++++++|+++++...++.|.+|+.+ +.. ..+....
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~-~~~~~~~ 125 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQA-HLLVGRY 125 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-EEEECEE
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCE-EEEEecc
Confidence 6899998 5566667789999997 4443 3444456678999999999977776666789999874 232 2222101
Q ss_pred ----CCceeEE-eecCCCEEEE----ecC-------------CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE
Q 029743 81 ----PNSVDAL-LKLDEDRVIT----GSE-------------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 81 ----~~~v~~~-~~~~~~~l~~----~~~-------------d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
...+..+ +.|+|+++++ |.. .+.|..+|..+++..... .. . ....++|+|+++.|
T Consensus 126 ~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-~-~p~gl~~spdg~~l 202 (305)
T 3dr2_A 126 AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL-D-HPNGLAFSPDEQTL 202 (305)
T ss_dssp TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-S-SEEEEEECTTSSEE
T ss_pred CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC-C-CCcceEEcCCCCEE
Confidence 1234556 7899998886 432 256778887666644333 22 3 56889999999988
Q ss_pred EEEeCC------CcEEEEeCCC
Q 029743 139 GSISHD------SMLKLWDLDD 154 (188)
Q Consensus 139 ~~~~~d------~~i~iwd~~~ 154 (188)
+.+... +.|.+|++..
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp EEEECCC---CCCEEEEEEEET
T ss_pred EEEecCCcCCCCCEEEEEEecC
Confidence 777654 6899999864
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.17 E-value=6e-09 Score=76.28 Aligned_cols=142 Identities=8% Similarity=-0.131 Sum_probs=100.0
Q ss_pred ecccCeEEEEeC--CC---cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec----------CCCeEEEEEeCC
Q 029743 4 AADAMKLLGTSG--DG---TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGY 68 (188)
Q Consensus 4 s~~~~~l~~~~~--d~---~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~ 68 (188)
.|++++++.... .. .|.++|..+++.+..++....+ .++++|++++++++. .++.|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 477888877764 23 7899999999888777743333 999999999999886 357899999875
Q ss_pred cccccceeeecc-------CCceeEE-eecCCCEEEEecC--CCeEEEEecccCeeeee-cccCCCcceeEEEeeCCC-C
Q 029743 69 FKDCSDRFVGLS-------PNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQP-IAEHSEYPIESLALSHDR-K 136 (188)
Q Consensus 69 ~~~~~~~~~~~~-------~~~v~~~-~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~ 136 (188)
.+.+..+.- . ......+ ++|+|++|++++. ++.|.++| .+++.+.. +... + ++.+.|++ +
T Consensus 107 -~~~~~~i~~-~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~----~~~~~~~~~~ 178 (373)
T 2mad_H 107 -FLPIADIEL-PDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T----CYHIHPGAPS 178 (373)
T ss_pred -CcEEEEEEC-CCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c----eEEEEeCCCc
Confidence 344443322 1 1223455 7999999998874 57899999 99988877 6543 2 23455555 3
Q ss_pred EEEEEeCCCcEEEEeCCCcc
Q 029743 137 FLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 137 ~l~~~~~d~~i~iwd~~~~~ 156 (188)
.+++.+.||.+.+++. +..
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCc
Confidence 4456667888888888 443
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.17 E-value=8e-09 Score=73.14 Aligned_cols=151 Identities=9% Similarity=0.051 Sum_probs=98.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecc----cccceEEEEEEeCCCEEEEecC---------CCeEEEEEeC
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWG 67 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~ 67 (188)
++++|+|+++++ . ++.|.+||..+++....... ....+..++++|+|++.++... .....+|.+.
T Consensus 59 i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 59 VALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp EEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred EEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 467899985554 3 56899999987765432221 1245789999999997665432 2335666665
Q ss_pred CcccccceeeeccCCceeEE-eecCCCEEE-EecCCCeEEEEec--ccCee-----eeecccCCCcceeEEEeeCCCCEE
Q 029743 68 YFKDCSDRFVGLSPNSVDAL-LKLDEDRVI-TGSENGLISLVGI--LPNRI-----IQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 68 ~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~-~~~~d~~v~~~d~--~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
..+.. ..+.. .......+ ++|+++.++ +.+.++.|.+|++ .++.. ...+..... .+..+++.++|++.
T Consensus 137 ~~g~~-~~~~~-~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 137 PDHHV-KKYFD-QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGMCIDAEGKLW 213 (297)
T ss_dssp TTSCE-EEEEE-EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEEEEBTTSCEE
T ss_pred CCCCE-EEEee-ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCeeEECCCCCEE
Confidence 43332 22333 33445667 799998765 4556789999987 34432 222332223 57889999999877
Q ss_pred EEEeCCCcEEEEeCCCcc
Q 029743 139 GSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~ 156 (188)
++....+.|.+||..++.
T Consensus 214 va~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEETTTEEEEECTTTCC
T ss_pred EEEcCCCEEEEEcCCCce
Confidence 777778889999998654
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.16 E-value=9.4e-09 Score=72.25 Aligned_cols=147 Identities=8% Similarity=0.035 Sum_probs=102.8
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceee-eecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG- 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~- 78 (188)
|+++++|++.++...++.|.+|+.. ++... .+......+.++++.++++..++...++.|..+|.. +.. ..+..
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~-~~~~~~ 100 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGF-TEYPLP 100 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-EEEECS
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCe-EEecCC
Confidence 3567888877776678899999987 54433 222334678999999999888877777889999875 232 22221
Q ss_pred ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeee-ecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQ-PIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
.....+..+ +.++|+++++...++.|..++.. ++... .+..... .+..+++.++++.+++...++.|..|+..
T Consensus 101 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 175 (300)
T 2qc5_A 101 QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS-YPAFITLGSDNALWFTENQNNSIGRITNT 175 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC-CEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC-CceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 023456777 68899888887778899999987 55432 2332223 68899999999866666667889999873
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.16 E-value=5.6e-09 Score=82.29 Aligned_cols=151 Identities=7% Similarity=0.007 Sum_probs=102.2
Q ss_pred CeeecccCeEEEEeCCC-------------cEEEEEcCCCce----eeeecc-cccceEEEEEEeCCCEEEEecC----C
Q 029743 1 MTFAADAMKLLGTSGDG-------------TLSVCNLRKNTV----QTRSEF-SEEELTSVVLMKNGRKVVCGSQ----S 58 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~-------------~i~i~~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d 58 (188)
++|+ |++.|+.+..+. .|++|++.++.. +..... |......+.|+|+|++|+.... .
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 4799 999999888774 389999877542 222233 4455788999999998865432 3
Q ss_pred CeEEEEEeCCcccccceeeeccCCceeEEeecCCCEEEEec-C---CCeEEEEecccCee--eeecccCCCcceeEEEee
Q 029743 59 GTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGS-E---NGLISLVGILPNRI--IQPIAEHSEYPIESLALS 132 (188)
Q Consensus 59 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~---d~~v~~~d~~~~~~--~~~~~~~~~~~v~~~~~~ 132 (188)
..|+++|+.........+.. +.......++++|..|+..+ . .+.|..+++.++.. ...+..+.. .+. .|+
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~-~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~--~~s 334 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQG-DLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ-QVL--TVH 334 (693)
T ss_dssp CEEEEEETTSTTCCCEEEEC-SSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCE--EEE
T ss_pred cEEEEEECCCCCCceEEEeC-CCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-CEE--EEE
Confidence 58999998764335666666 66655555777666655443 3 36799999987654 234545544 343 889
Q ss_pred CCCCEEEEEeCCC---cEEEEeCCCcc
Q 029743 133 HDRKFLGSISHDS---MLKLWDLDDIL 156 (188)
Q Consensus 133 ~~~~~l~~~~~d~---~i~iwd~~~~~ 156 (188)
+++++|+....++ .|++|++....
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCe
Confidence 9998887666443 68999987543
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.16 E-value=1.1e-08 Score=75.87 Aligned_cols=148 Identities=9% Similarity=0.057 Sum_probs=99.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeee----ecccccce-E-EEEEEeC-CCEEEEecCCCeEEEEEeCCccccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR----SEFSEEEL-T-SVVLMKN-GRKVVCGSQSGTVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~----~~~~~~~v-~-~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~ 73 (188)
++++|++..|+.+..++.|+.|+..++..... ..++...- . .++|+|+ +.++++-..++.|+.|+.+. . .
T Consensus 224 iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~ 300 (409)
T 3hrp_A 224 VALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E-C 300 (409)
T ss_dssp CEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C-E
T ss_pred EEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C-E
Confidence 46888555566677788999999887654322 12222222 3 9999995 56666666778899998753 2 3
Q ss_pred ceeeeccC---------------CceeEE-eecCCCEEEEec-CCCeEEEEecccCeeeeecccCC--------------
Q 029743 74 DRFVGLSP---------------NSVDAL-LKLDEDRVITGS-ENGLISLVGILPNRIIQPIAEHS-------------- 122 (188)
Q Consensus 74 ~~~~~~~~---------------~~v~~~-~~~~~~~l~~~~-~d~~v~~~d~~~~~~~~~~~~~~-------------- 122 (188)
..+.+ +. .....+ ++|+|+++++-. .++.|+.|++.++... ++.++.
T Consensus 301 ~~~~g-~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~g~~~g~~~~~~ 378 (409)
T 3hrp_A 301 EWFCG-SATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVASQIDGTPLEAT 378 (409)
T ss_dssp EEEEE-CTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCBSCCCBSTTTCC
T ss_pred EEEEe-CCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCCCcCCCChhceE
Confidence 33333 22 235667 799999888877 8899999997777643 332220
Q ss_pred CcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 123 EYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 123 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
-.....+++++++.++++-..++.|+.++++
T Consensus 379 ~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 379 FNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp BSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred eCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 0147899999998777777788888887753
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.13 E-value=1.6e-08 Score=71.07 Aligned_cols=146 Identities=7% Similarity=-0.008 Sum_probs=100.6
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceee-eecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce-eeec
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQT-RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR-FVGL 79 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~ 79 (188)
+++++++++++...++.|..+|.. ++... .+......+.++++.++++..++...++.|..++.. +..... +..
T Consensus 68 ~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~- 143 (300)
T 2qc5_A 68 IVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTIYEYDLPN- 143 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT--SCEEEEECSS-
T ss_pred EECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC--CCEEEccCCC-
Confidence 567788877766667889999987 54432 222234678999999999888887778889888875 232211 222
Q ss_pred cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeee-ecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 80 SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQ-PIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 80 ~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
....+..+ +.++|+++++...++.|..++. +++... .+..... .+..+++.+++..+++....+.|.+|+..
T Consensus 144 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 144 KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAA-APVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC-CEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCC-CcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 23456777 6889997777777888999998 554432 2222222 58899999999877766667789999983
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.13 E-value=7.1e-10 Score=80.86 Aligned_cols=160 Identities=9% Similarity=-0.076 Sum_probs=109.7
Q ss_pred CeeecccCeEEEEe----------CCCcEEEEEcCCCceeeeeccc-------ccceEEEEEEeCCCEEEEecC--CCeE
Q 029743 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (188)
Q Consensus 1 l~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i 61 (188)
+.++||+++++++. .++.|.+||..+++.+..+... ......++++|||++++++.. ...+
T Consensus 70 i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v 149 (368)
T 1mda_H 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAA 149 (368)
T ss_dssp EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEE
T ss_pred eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeE
Confidence 47899999999886 3688999999999988887633 134678999999999988764 3567
Q ss_pred EE--EEeCC------c----------------------------------cccc--------------------------
Q 029743 62 LL--YSWGY------F----------------------------------KDCS-------------------------- 73 (188)
Q Consensus 62 ~~--~d~~~------~----------------------------------~~~~-------------------------- 73 (188)
.+ +|..+ . +...
T Consensus 150 ~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs 229 (368)
T 1mda_H 150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV 229 (368)
T ss_dssp EEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred EEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc
Confidence 77 66521 0 0000
Q ss_pred ----ceeeec-cC---------------------CceeEE-eecCCCEEEEecC---------CCeEEEEecccCeeeee
Q 029743 74 ----DRFVGL-SP---------------------NSVDAL-LKLDEDRVITGSE---------NGLISLVGILPNRIIQP 117 (188)
Q Consensus 74 ----~~~~~~-~~---------------------~~v~~~-~~~~~~~l~~~~~---------d~~v~~~d~~~~~~~~~ 117 (188)
..+... .. .....+ ++|++++++++.. .+.+.++|+.+.+.+..
T Consensus 230 ~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~ 309 (368)
T 1mda_H 230 ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309 (368)
T ss_dssp SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC
T ss_pred CCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE
Confidence 000000 00 000114 6888888876533 23566999999999888
Q ss_pred cccCCCcceeEEEeeCCCCE-EEEEe-CCCcEEEEeCCCccCCCCCC
Q 029743 118 IAEHSEYPIESLALSHDRKF-LGSIS-HDSMLKLWDLDDILKGSGNN 162 (188)
Q Consensus 118 ~~~~~~~~v~~~~~~~~~~~-l~~~~-~d~~i~iwd~~~~~~~~~~~ 162 (188)
+... . ....++|+||+++ +++.. .++.|.++|+.+.+....++
T Consensus 310 i~vg-~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 310 ISNG-H-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp CEEE-E-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred EECC-C-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 8765 3 5889999999985 45555 58999999999987654443
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.09 E-value=2.4e-08 Score=70.79 Aligned_cols=150 Identities=10% Similarity=0.078 Sum_probs=96.4
Q ss_pred Ceeecc-cCeEEEEeCCCcEEEEEcCCCceeee-ecc----cccceEEEEEEeCCCEEEEecCC---------------C
Q 029743 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTR-SEF----SEEELTSVVLMKNGRKVVCGSQS---------------G 59 (188)
Q Consensus 1 l~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------~ 59 (188)
++++++ ++++++ +..+.|.+|+.. ++.... ... ....+.++++.++|+..++...+ +
T Consensus 76 i~~~~~~g~l~v~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 76 CQCDRDANQLFVA-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp EEECSSSSEEEEE-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred EEEecCCCcEEEE-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence 357788 655544 444579999988 665433 221 12357899999999887776654 4
Q ss_pred eEEEEEeCCcccccceeeeccCCceeEE-ee----cCCCEEEEe-cCCCeEEEEecc-cCe-----eeeecccCCCccee
Q 029743 60 TVLLYSWGYFKDCSDRFVGLSPNSVDAL-LK----LDEDRVITG-SENGLISLVGIL-PNR-----IIQPIAEHSEYPIE 127 (188)
Q Consensus 60 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~~----~~~~~l~~~-~~d~~v~~~d~~-~~~-----~~~~~~~~~~~~v~ 127 (188)
.|..++.. +... .+.. +......+ ++ |+++.++.+ ..++.|.+|++. ++. ....+..+....+.
T Consensus 154 ~l~~~~~~--g~~~-~~~~-~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 154 SIYCFTTD--GQMI-QVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp EEEEECTT--SCEE-EEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred eEEEECCC--CCEE-Eecc-CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 55555543 3322 2222 33345666 78 998765544 567899999986 343 22333333202578
Q ss_pred EEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 128 SLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 128 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
.++++++|+++++...++.|.+||.++..
T Consensus 230 ~i~~d~~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred ceEECCCCCEEEEEcCCCEEEEEcCCCCc
Confidence 89999999888877778899999988544
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.09 E-value=1.4e-08 Score=75.38 Aligned_cols=158 Identities=13% Similarity=0.133 Sum_probs=100.3
Q ss_pred CeeecccCeEEEEeC--CCcEEEEEcCCCceeeeeccccc-------ceEEEEEEeCCCEEEEe----------------
Q 029743 1 MTFAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSEFSEE-------ELTSVVLMKNGRKVVCG---------------- 55 (188)
Q Consensus 1 l~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~---------------- 55 (188)
++|+|||++|+++.. ++.|.++|+.+++.+..++-... ....+.++++|++++..
T Consensus 182 ~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v 261 (426)
T 3c75_H 182 NALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHT 261 (426)
T ss_dssp SEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSC
T ss_pred EEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeecc
Confidence 579999999999874 57899999999887776653110 01123344444443332
Q ss_pred ---------------------cCCCeEEEEEeCCccc-ccceeee---------ccCCceeEE-eecCCCEEEEecC---
Q 029743 56 ---------------------SQSGTVLLYSWGYFKD-CSDRFVG---------LSPNSVDAL-LKLDEDRVITGSE--- 100 (188)
Q Consensus 56 ---------------------~~d~~i~~~d~~~~~~-~~~~~~~---------~~~~~v~~~-~~~~~~~l~~~~~--- 100 (188)
...+.+.+.|+..... ....+.- ........+ ++|+++++++...
T Consensus 262 ~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~ 341 (426)
T 3c75_H 262 EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRD 341 (426)
T ss_dssp TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECC
T ss_pred CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccc
Confidence 2334445555432110 0000000 000111124 6889887776642
Q ss_pred -------CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC-EEEEEe-CCCcEEEEeCCCccCCCC
Q 029743 101 -------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSIS-HDSMLKLWDLDDILKGSG 160 (188)
Q Consensus 101 -------d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~iwd~~~~~~~~~ 160 (188)
.+.|.++|+.+.+.+..+... . ....++|+||++ ++++.. .++.|.++|+.+.+....
T Consensus 342 ~gthk~~s~~VsVID~~T~kvv~~I~vg-~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 342 EWKHKAASRFVVVLNAETGERINKIELG-H-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp TTCTTSCEEEEEEEETTTCCEEEEEEEE-E-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred cccccCCCCEEEEEECCCCeEEEEEECC-C-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 357999999999999888755 2 478999999999 888777 589999999998876543
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.05 E-value=9.2e-09 Score=75.20 Aligned_cols=151 Identities=11% Similarity=-0.019 Sum_probs=100.2
Q ss_pred CeeecccCeEEEEe----------CCCcEEEEEcCCCceeeeeccc-------ccceEEEEEEeCCCEEEEecC--CCeE
Q 029743 1 MTFAADAMKLLGTS----------GDGTLSVCNLRKNTVQTRSEFS-------EEELTSVVLMKNGRKVVCGSQ--SGTV 61 (188)
Q Consensus 1 l~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i 61 (188)
+++||||++++++. .++.|.+||..+++.+..+.-. ......++++|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 47899999998876 3578999999999888776522 124668999999999988864 6899
Q ss_pred EEEEeCCcccccceeeeccCCceeEEeecCCCEEEEecCCCeEEEEeccc-CeeeeecccCC---Cccee-EEEee-CCC
Q 029743 62 LLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRVITGSENGLISLVGILP-NRIIQPIAEHS---EYPIE-SLALS-HDR 135 (188)
Q Consensus 62 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~-~~~~~~~~~~~---~~~v~-~~~~~-~~~ 135 (188)
.++|+.+ .+.+..+.- .. ...++....+.+++.+.||.+.+.++.+ ++......... ..++. ...|. ++|
T Consensus 163 sVID~~t-~~vv~tI~v-~g--~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEG-KAFKRMLDV-PD--CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTT-TEEEEEEEC-CS--EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCC-CcEEEEEEC-CC--cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 9999986 455555543 21 1122333445677778888888888865 44322111110 11222 24664 577
Q ss_pred CEEEEEeCCCcEEEEeCCCcc
Q 029743 136 KFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 136 ~~l~~~~~d~~i~iwd~~~~~ 156 (188)
+++. .+.++.|++.|+.+..
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSS
T ss_pred cEEE-EeCCCEEEEEECCCCc
Confidence 5554 5568999999997653
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.05 E-value=8.1e-08 Score=68.93 Aligned_cols=148 Identities=7% Similarity=0.069 Sum_probs=93.5
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecc----cccceEEEEEEeCCCEEEEecCC----CeEEEEEeCCcccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEF----SEEELTSVVLMKNGRKVVCGSQS----GTVLLYSWGYFKDC 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~ 72 (188)
++++|+|+++++. . ..|.+||..+++....... ....+..++++|+|+++++...+ ....+|.++. +..
T Consensus 95 i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~-g~~ 171 (326)
T 2ghs_A 95 LAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAK-GKV 171 (326)
T ss_dssp EEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEET-TEE
T ss_pred EEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeC-CcE
Confidence 3578888877764 3 4599999888765432221 12358899999999876654321 2234444432 332
Q ss_pred cceeeeccCCceeEE-eecCCCEEEEe-cCCCeEEEEecc--cC-ee-----eeecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 73 SDRFVGLSPNSVDAL-LKLDEDRVITG-SENGLISLVGIL--PN-RI-----IQPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 73 ~~~~~~~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~--~~-~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
..+.. .......+ ++|+++.++.+ +.++.|.+|++. ++ .. ...+..... .+..+++.++|.+.++..
T Consensus 172 -~~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-~p~gi~~d~~G~lwva~~ 248 (326)
T 2ghs_A 172 -TKLFA-DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG-GMDGSVCDAEGHIWNARW 248 (326)
T ss_dssp -EEEEE-EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS-EEEEEEECTTSCEEEEEE
T ss_pred -EEeeC-CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC-CCCeeEECCCCCEEEEEe
Confidence 22323 33345566 79999876554 567899999986 55 31 222322223 567899999998777666
Q ss_pred CCCcEEEEeCCC
Q 029743 143 HDSMLKLWDLDD 154 (188)
Q Consensus 143 ~d~~i~iwd~~~ 154 (188)
.++.|.+|+...
T Consensus 249 ~~~~v~~~d~~g 260 (326)
T 2ghs_A 249 GEGAVDRYDTDG 260 (326)
T ss_dssp TTTEEEEECTTC
T ss_pred CCCEEEEECCCC
Confidence 678899999843
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.02 E-value=1.4e-08 Score=72.07 Aligned_cols=143 Identities=7% Similarity=0.054 Sum_probs=91.5
Q ss_pred CeeecccCeEEE----EeC-------------CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC-----
Q 029743 1 MTFAADAMKLLG----TSG-------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS----- 58 (188)
Q Consensus 1 l~~s~~~~~l~~----~~~-------------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 58 (188)
++++|+|++.++ |.. .+.|+.++..+++..... .......++|+|+++.|+.+...
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~ 213 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHG 213 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---C
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCC
Confidence 357888887775 331 246777777666554333 34456889999999988777665
Q ss_pred -CeEEEEEeCCcc-cccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCC
Q 029743 59 -GTVLLYSWGYFK-DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR 135 (188)
Q Consensus 59 -~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 135 (188)
+.|.+|++...+ .....+..........+ +.++|++. ++..+ .|.+|+. .++.+..+..+ . .+.+++|.+++
T Consensus 214 ~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~~~~~~-~-~~~~~~f~~d~ 288 (305)
T 3dr2_A 214 SVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLGHIPTP-G-TASNCTFDQAQ 288 (305)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEEEEECS-S-CCCEEEECTTS
T ss_pred CCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCCEEEEEECC-C-ceeEEEEeCCC
Confidence 689999986432 00011111012234455 68889844 44444 4999997 56666677655 3 58899999999
Q ss_pred CEEEEEeCCCcEEEEe
Q 029743 136 KFLGSISHDSMLKLWD 151 (188)
Q Consensus 136 ~~l~~~~~d~~i~iwd 151 (188)
+.|..++.++ +..++
T Consensus 289 ~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 289 QRLFITGGPC-LWMLP 303 (305)
T ss_dssp CEEEEEETTE-EEEEE
T ss_pred CEEEEEcCCe-EEEEE
Confidence 8888777654 44333
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=1.1e-07 Score=66.21 Aligned_cols=156 Identities=9% Similarity=0.007 Sum_probs=103.9
Q ss_pred CeeecccCeEEEEeC--CCcEEEEEcCCCceeeeecc-cccceEEEEEEeCCCEEEE-ecCCCeEEEEEeCCccccccee
Q 029743 1 MTFAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
|+|+|++.+.++.+. ++.|+++|+.+++.+..+.- .......+++. ++.|+. .-.++.+.++|..+ .+.+..+
T Consensus 26 l~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t-~~v~~~i 102 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRT-LSNIKNF 102 (266)
T ss_dssp EEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTT-TEEEEEE
T ss_pred EEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCC-CcEEEEE
Confidence 468888655454443 58999999999998887652 11223345554 555554 44578999999876 4566666
Q ss_pred eeccCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCC-Cc---ceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EY---PIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
.. . .+...-.+++|+.++++..++.|.++|..+.+.+..+.... +. .++.+.|. ++...+....++.|.+.|.
T Consensus 103 ~~-g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 103 TH-Q-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISA 179 (266)
T ss_dssp EC-C-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEET
T ss_pred EC-C-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEEC
Confidence 53 3 11111156788888877788999999999988777665321 11 35678888 6755555556789999999
Q ss_pred CCccCCCCCC
Q 029743 153 DDILKGSGNN 162 (188)
Q Consensus 153 ~~~~~~~~~~ 162 (188)
.+++....+.
T Consensus 180 ~tg~V~~~I~ 189 (266)
T 2iwa_A 180 KDGTLLGWIL 189 (266)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEEE
Confidence 9887554443
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.00 E-value=7.1e-08 Score=69.22 Aligned_cols=136 Identities=12% Similarity=0.056 Sum_probs=87.7
Q ss_pred eeecccCeEEEEeC------CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEe-cCCCeEEEEEeC-Ccc-cc
Q 029743 2 TFAADAMKLLGTSG------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWG-YFK-DC 72 (188)
Q Consensus 2 ~~s~~~~~l~~~~~------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~-~~~-~~ 72 (188)
+++|+|+++++... .+.|+.++ +++... +.........++|+|+++.++.+ ..++.|.+|+++ ..+ ..
T Consensus 140 ~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~ 216 (326)
T 2ghs_A 140 RMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT 216 (326)
T ss_dssp EECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS
T ss_pred EECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcc
Confidence 57889987665432 24566666 454432 32233456799999999876554 556899999985 112 21
Q ss_pred --cceeeec--cCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEee-CCCCEEEEEe
Q 029743 73 --SDRFVGL--SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALS-HDRKFLGSIS 142 (188)
Q Consensus 73 --~~~~~~~--~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 142 (188)
.+.+... ....+..+ +.++|.++++...++.|.+|+. +++.+..+..+.. .+.+++|. ++++.|+.++
T Consensus 217 ~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~-~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 217 GKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK-QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS-BEEEEEEESTTSCEEEEEE
T ss_pred cCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCC-CcEEEEEecCCCCEEEEEe
Confidence 1122110 22345566 6889987777666788999998 5666666665544 68999998 8887775544
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.98 E-value=3.1e-11 Score=88.29 Aligned_cols=144 Identities=11% Similarity=0.003 Sum_probs=77.8
Q ss_pred ecccCeEEEEeCCCcEEEEEcCCCceeeeeccccc-ceE-EEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccC
Q 029743 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEE-ELT-SVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP 81 (188)
Q Consensus 4 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 81 (188)
..+++.+++++.|+.|+.||.++++.+.....+.. .+. +.... .+..+++++.++.++.||..+ ++.+..+.. +.
T Consensus 46 ~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~-~~ 122 (369)
T 2hz6_A 46 HVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLT-GEKQQTLSS-AF 122 (369)
T ss_dssp ----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------
T ss_pred EcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCC-CcEEEEecC-CC
Confidence 34666777778999999999988877655543211 111 11111 345677888899999999986 455555544 32
Q ss_pred CceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCC---CEEEEEeCCCcEEEEeCCCccC
Q 029743 82 NSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDR---KFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 82 ~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
.. ++|++..+++++.++.|+.||.++++.+..+... .....++..+. ..+++++.++.|+.||.+++..
T Consensus 123 ----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~---~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 123 ----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF---DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp --------------EEEEEEEEEEECCCSSSSSCCCEEEEE---EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred ----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc---cccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 12 4678889999999999999999999877665432 12333444432 4577788899999999987654
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.96 E-value=3.1e-08 Score=73.47 Aligned_cols=113 Identities=9% Similarity=-0.092 Sum_probs=84.7
Q ss_pred cccCeEEEEeCC-----CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec----------CCCeEEEEEeCCc
Q 029743 5 ADAMKLLGTSGD-----GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGYF 69 (188)
Q Consensus 5 ~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~ 69 (188)
|+++.+++.... +.|.++|..+++.+..++.-..+ .++++|++++++++. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t- 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT- 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT-
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC-
Confidence 467777766553 69999999999999888844444 899999999988876 366899999876
Q ss_pred ccccceeeecc-------CCceeEE-eecCCCEEEEecC--CCeEEEEecccCeeeeecccC
Q 029743 70 KDCSDRFVGLS-------PNSVDAL-LKLDEDRVITGSE--NGLISLVGILPNRIIQPIAEH 121 (188)
Q Consensus 70 ~~~~~~~~~~~-------~~~v~~~-~~~~~~~l~~~~~--d~~v~~~d~~~~~~~~~~~~~ 121 (188)
.+.+..+.- . ......+ ++|+|++++++.. ++.|.+.|+.+++.+..+...
T Consensus 159 ~~vv~~I~v-~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 159 FLPIADIEL-PDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp CCEEEEEEE-TTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CcEEEEEEC-CCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 355554432 1 1223344 7999999998763 678999999999988877653
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=1.3e-07 Score=68.34 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=93.4
Q ss_pred CeeecccCeEEEEeC--CCcEEEEEcCCCceeeeec-------ccccceEEEEEEeCCCEEEEecC-----CCeEEEEEe
Q 029743 1 MTFAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSE-------FSEEELTSVVLMKNGRKVVCGSQ-----SGTVLLYSW 66 (188)
Q Consensus 1 l~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~ 66 (188)
++++|+|+.+++... ++.++||.+.+++.. .++ .+-..+..++++++++++++-.. +..|.+||+
T Consensus 22 va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 22 ITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred EEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 468899998888642 342444544455432 221 24467899999999876665433 578999998
Q ss_pred CCcccccceeee-----ccCCceeEE-eecCCCEE-EEec---CCCeEEEEecccCeeeeecccCC--------------
Q 029743 67 GYFKDCSDRFVG-----LSPNSVDAL-LKLDEDRV-ITGS---ENGLISLVGILPNRIIQPIAEHS-------------- 122 (188)
Q Consensus 67 ~~~~~~~~~~~~-----~~~~~v~~~-~~~~~~~l-~~~~---~d~~v~~~d~~~~~~~~~~~~~~-------------- 122 (188)
.+ ++.+..+.. .+...+..+ +++++..+ ++.. .++.|.+||+.+++..+.+.+|.
T Consensus 101 ~t-g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~ 179 (343)
T 2qe8_A 101 LN-NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGV 179 (343)
T ss_dssp TT-TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTE
T ss_pred CC-CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCE
Confidence 75 344444432 012234666 68765444 4544 57889999998777655443310
Q ss_pred --------------CcceeEEEeeCCCCEEEEEeCCC-cEEEEe
Q 029743 123 --------------EYPIESLALSHDRKFLGSISHDS-MLKLWD 151 (188)
Q Consensus 123 --------------~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd 151 (188)
...+..++|+|+++.|+.+...+ .|..++
T Consensus 180 ~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 180 PVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp ECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 01257899999999888777655 555544
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.94 E-value=2.4e-08 Score=72.20 Aligned_cols=146 Identities=6% Similarity=-0.024 Sum_probs=91.1
Q ss_pred CeeecccCeEEEE-e---CCCcEEEEEcCCCceeeeecccc-----------------------------cceEEEEEEe
Q 029743 1 MTFAADAMKLLGT-S---GDGTLSVCNLRKNTVQTRSEFSE-----------------------------EELTSVVLMK 47 (188)
Q Consensus 1 l~~s~~~~~l~~~-~---~d~~i~i~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~ 47 (188)
++++|++..++.+ . .++.|.+||+.+++..+.+.+|. ..+..++|+|
T Consensus 125 v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~ 204 (343)
T 2qe8_A 125 LAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA 204 (343)
T ss_dssp EEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECT
T ss_pred EEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEecc
Confidence 3567755455444 3 56899999998776655443321 2358899999
Q ss_pred CCCEEEEecCCC-eEEEEEeCC--c-----ccccc--eeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeee
Q 029743 48 NGRKVVCGSQSG-TVLLYSWGY--F-----KDCSD--RFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQ 116 (188)
Q Consensus 48 ~~~~l~~~~~d~-~i~~~d~~~--~-----~~~~~--~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~ 116 (188)
+++.|+.+...+ .+..++... . .+... ...+ +......+ ++++|.++++...++.|.+||..+++...
T Consensus 205 dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~ 283 (343)
T 2qe8_A 205 ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKL 283 (343)
T ss_dssp TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEE
Confidence 999888877665 444444321 0 00011 1123 33344556 68999999998899999999985565433
Q ss_pred ecccCCCcceeEEEeeCCCCEEEEEeCCCcE
Q 029743 117 PIAEHSEYPIESLALSHDRKFLGSISHDSML 147 (188)
Q Consensus 117 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 147 (188)
.........+.+++|.+++.++++.+..+.+
T Consensus 284 ~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 284 LVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 3222111257899999998877776644444
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=1.6e-07 Score=69.61 Aligned_cols=150 Identities=11% Similarity=0.015 Sum_probs=100.7
Q ss_pred eeecccCeEEEEeCC------CcEEEEEcCCCceeeeecccc---cceEEEEEEeCCCEEEEec----------------
Q 029743 2 TFAADAMKLLGTSGD------GTLSVCNLRKNTVQTRSEFSE---EELTSVVLMKNGRKVVCGS---------------- 56 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~---------------- 56 (188)
..+|+| .++++..+ +.|.++|.++.+.+..+.... ..-..+.|+|+++.++++.
T Consensus 144 ~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 144 HCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp EECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred eECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 457888 66665544 689999999998888876221 2234688899999888885
Q ss_pred ---CCCeEEEEEeCCcccccceeeeccC--CceeEE-e--ecCCCEEEEec------CCCeEEEEecccCee--eeec--
Q 029743 57 ---QSGTVLLYSWGYFKDCSDRFVGLSP--NSVDAL-L--KLDEDRVITGS------ENGLISLVGILPNRI--IQPI-- 118 (188)
Q Consensus 57 ---~d~~i~~~d~~~~~~~~~~~~~~~~--~~v~~~-~--~~~~~~l~~~~------~d~~v~~~d~~~~~~--~~~~-- 118 (188)
...+|.+||+.. ++.++.+.- .. .....+ | +|+++++++++ .+++|.+|....+.. ...+
T Consensus 223 ~~~~~d~V~v~D~~~-~k~~~tI~v-g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi 300 (462)
T 2ece_A 223 KDRYGNRIHFWDLRK-RKRIHSLTL-GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI 300 (462)
T ss_dssp HHHSCCEEEEEETTT-TEEEEEEES-CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred hhccCCEEEEEECCC-CcEeeEEec-CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence 367999999986 455555543 21 223333 4 99999888777 456787765543321 1110
Q ss_pred ccC---------------CCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCCC
Q 029743 119 AEH---------------SEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDD 154 (188)
Q Consensus 119 ~~~---------------~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 154 (188)
... .+.....+.+++|+++|.++. ..+.|.+||+..
T Consensus 301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 000 012468899999999997666 468999999863
No 228
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=2.2e-07 Score=64.10 Aligned_cols=153 Identities=8% Similarity=0.061 Sum_probs=102.8
Q ss_pred eeecccCeEEEEeCCC--cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec-CCCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGTSGDG--TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
.|+ ++.++.+.+.+| .|+++|+++++.+..+.- ..........++++.|+... .++.+.+||..+ .+.+..+..
T Consensus 49 ~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t-~~~~~ti~~ 125 (262)
T 3nol_A 49 FYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN-LRQVRSFNY 125 (262)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTT-CCEEEEEEC
T ss_pred EEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECcc-CcEEEEEEC
Confidence 466 566666666655 899999999998887763 23444433444565665554 578999999976 466666654
Q ss_pred ccCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCC-Cc---ceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EY---PIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
.... .. +.++++.|+....++.|+++|..+.+.+..+.... +. .++.+.|. +|+..+..-.++.|.+.|.++
T Consensus 126 -~~eG-~g-lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 126 -DGEG-WG-LTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp -SSCC-CC-EEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred -CCCc-eE-EecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 2211 22 35677878777778899999999988777765421 11 34567776 676555554678999999998
Q ss_pred ccCCCCC
Q 029743 155 ILKGSGN 161 (188)
Q Consensus 155 ~~~~~~~ 161 (188)
+.....+
T Consensus 202 G~V~~~I 208 (262)
T 3nol_A 202 GKVTGII 208 (262)
T ss_dssp CBEEEEE
T ss_pred CcEEEEE
Confidence 8754443
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.89 E-value=2.1e-07 Score=69.04 Aligned_cols=145 Identities=10% Similarity=0.045 Sum_probs=97.9
Q ss_pred cccCeEEEE-eCCCcEEEEEcCCC----ceeeeec------c-cccceEEEEEEeCCCEEEEecCC------CeEEEEEe
Q 029743 5 ADAMKLLGT-SGDGTLSVCNLRKN----TVQTRSE------F-SEEELTSVVLMKNGRKVVCGSQS------GTVLLYSW 66 (188)
Q Consensus 5 ~~~~~l~~~-~~d~~i~i~~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~ 66 (188)
+++++|+.. -.++.|+|+|+.+. +..+++. . -......+...|+| .++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 778887665 45789999998754 5555552 1 11245677888999 66665544 68999998
Q ss_pred CCcccccceeeeccCC---ceeEE-eecCCCEEEEec-------------------CCCeEEEEecccCeeeeecccC-C
Q 029743 67 GYFKDCSDRFVGLSPN---SVDAL-LKLDEDRVITGS-------------------ENGLISLVGILPNRIIQPIAEH-S 122 (188)
Q Consensus 67 ~~~~~~~~~~~~~~~~---~v~~~-~~~~~~~l~~~~-------------------~d~~v~~~d~~~~~~~~~~~~~-~ 122 (188)
.+ .+.+..+.. ... ....+ ++|+++.+++.. ..++|.+||+.+++.+.++... .
T Consensus 172 ~T-~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 172 YS-FEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TT-CCEEEECCS-BCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CC-CeEEEEEcc-CCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 76 455666542 212 23345 699999888874 3688999999998877777653 2
Q ss_pred CcceeEEEe--eCCCCEEEEEe------CCCcEEEEeC
Q 029743 123 EYPIESLAL--SHDRKFLGSIS------HDSMLKLWDL 152 (188)
Q Consensus 123 ~~~v~~~~~--~~~~~~l~~~~------~d~~i~iwd~ 152 (188)
+.....+.| +|+++++.+++ .+++|.+|..
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~ 287 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFY 287 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEe
Confidence 223455655 99999887666 4567766544
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.88 E-value=1.3e-07 Score=72.32 Aligned_cols=145 Identities=10% Similarity=0.034 Sum_probs=101.1
Q ss_pred cccCeEEEEeC------------------CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCC-------
Q 029743 5 ADAMKLLGTSG------------------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG------- 59 (188)
Q Consensus 5 ~~~~~l~~~~~------------------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 59 (188)
|+++++++++. ++.+.+.|.++.+...++.--. ....++++|+|+++++.+.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchh
Confidence 89999988852 3578899999988888776322 457788999999998877543
Q ss_pred -------------------------------eEEEEEeCCc-ccc-cceeeeccCCceeEE-eecCCCEEEEec-CCCeE
Q 029743 60 -------------------------------TVLLYSWGYF-KDC-SDRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLI 104 (188)
Q Consensus 60 -------------------------------~i~~~d~~~~-~~~-~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~v 104 (188)
.|.+.|.... +.. +..+.. .. ...++ ++|||+++++++ .+.+|
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~-~PhGv~~sPDGk~v~V~~~~s~~V 301 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-AN-NPHGCNMAPDKKHLCVAGKLSPTV 301 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ES-SCCCEEECTTSSEEEEECTTSSBE
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CC-CceEEEEcCCCCEEEEeCCCCCeE
Confidence 3556665531 112 233332 23 34445 899999877665 68899
Q ss_pred EEEecccCe------------eeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 105 SLVGILPNR------------IIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 105 ~~~d~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
.++|+.+.+ ...++.... ....++|+++|...++.-.|++|.+||+.+
T Consensus 302 sVid~~~~~~~~~~~l~~~~~v~~~v~vG~--gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 302 TVLDVTRFDAVFYENADPRSAVVAEPELGL--GPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEGGGHHHHHHSCCCGGGGEEECCBCCS--CEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EEEECcccccccccccCcccceEEEcCCCC--CcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 999998653 233443332 478899999994445566899999999987
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.88 E-value=1.6e-07 Score=74.02 Aligned_cols=154 Identities=10% Similarity=0.054 Sum_probs=104.1
Q ss_pred eeecccCeEEEEeCCC-------------------cEEEEEcCCCceeeeecc--cc-------cceEEEEEEeCCC---
Q 029743 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR--- 50 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~-------------------~i~i~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~--- 50 (188)
+++|+.++++.+..++ .|..+|..+|+.+..++. |. .++.......+|+
T Consensus 241 ~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~ 320 (689)
T 1yiq_A 241 AYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRK 320 (689)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEE
Confidence 4677788888887765 399999999999887763 21 1222223334665
Q ss_pred EEEEecCCCeEEEEEeCCcccccceeeecc---------------------------C----------C-ceeEE-eecC
Q 029743 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLS---------------------------P----------N-SVDAL-LKLD 91 (188)
Q Consensus 51 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---------------------------~----------~-~v~~~-~~~~ 91 (188)
.++.++.+|.++++|..+ ++.+....... . . .-..+ ++|+
T Consensus 321 ~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~ 399 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRAT-GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD 399 (689)
T ss_dssp EEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred EEEEECCCCeEEEEECCC-CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC
Confidence 788999999999999876 34432111000 0 0 00113 5777
Q ss_pred CCEEEEecC---------------------------------------------CCeEEEEecccCeeeeecccCCCcce
Q 029743 92 EDRVITGSE---------------------------------------------NGLISLVGILPNRIIQPIAEHSEYPI 126 (188)
Q Consensus 92 ~~~l~~~~~---------------------------------------------d~~v~~~d~~~~~~~~~~~~~~~~~v 126 (188)
..++++... +|.|+.||+.+++.+.++..+. ++
T Consensus 400 ~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--~~ 477 (689)
T 1yiq_A 400 TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT--IF 477 (689)
T ss_dssp TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS--SC
T ss_pred CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC--Cc
Confidence 676665421 3779999999999888876553 34
Q ss_pred eEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 127 ESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 127 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
....+...+..++.++.|+.|+.||.++++..
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 44466667888999999999999999988754
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.86 E-value=1.4e-07 Score=74.29 Aligned_cols=154 Identities=10% Similarity=0.088 Sum_probs=106.9
Q ss_pred eeecccCeEEEEeCCC-------------------cEEEEEcCCCceeeeecc--cc-------cceEEEEEEeCC---C
Q 029743 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNG---R 50 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~-------------------~i~i~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~ 50 (188)
+++|++++++.+..++ .|..+|..+|+.+..++. |. .....+....+| .
T Consensus 249 ~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~ 328 (677)
T 1kb0_A 249 TFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRK 328 (677)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEE
T ss_pred eEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEee
Confidence 4677888888877653 499999999998877653 21 122333344577 6
Q ss_pred EEEEecCCCeEEEEEeCCcccccceeeeccC-----------Cce------------------------eEE-eecCCCE
Q 029743 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP-----------NSV------------------------DAL-LKLDEDR 94 (188)
Q Consensus 51 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----------~~v------------------------~~~-~~~~~~~ 94 (188)
.++.++.+|.++++|..+ ++.+..+.. .. .++ ..+ ++|++.+
T Consensus 329 ~l~~~~~~G~l~~lD~~t-G~~l~~~~~-~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTN-GKFISAKNF-VPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEECCTTSEEEEEETTT-CCEEEEEES-SCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred EEEEECCCCEEEEEECCC-CCEeccccc-cccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 889999999999999876 444433321 10 000 123 5788787
Q ss_pred EEEecC-------------------------------------------CCeEEEEecccCeeeeecccCCCcceeEEEe
Q 029743 95 VITGSE-------------------------------------------NGLISLVGILPNRIIQPIAEHSEYPIESLAL 131 (188)
Q Consensus 95 l~~~~~-------------------------------------------d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~ 131 (188)
+++... .+.|..||+.+++.+.++... . ++....+
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~-~~~~g~~ 484 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-S-PWNGGTL 484 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-S-SCCCCEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-C-CCcCcce
Confidence 776532 277999999999988877643 2 4555667
Q ss_pred eCCCCEEEEEeCCCcEEEEeCCCccCCC
Q 029743 132 SHDRKFLGSISHDSMLKLWDLDDILKGS 159 (188)
Q Consensus 132 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 159 (188)
..++..++.++.|+.+++||+++++...
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceee
Confidence 7778888889999999999999887543
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=2.3e-07 Score=73.00 Aligned_cols=144 Identities=10% Similarity=0.052 Sum_probs=100.3
Q ss_pred CeEEEEeCCCcEEEEEcCCCceeeeecccc-----------cce------------------------EEEEEEeCCCEE
Q 029743 8 MKLLGTSGDGTLSVCNLRKNTVQTRSEFSE-----------EEL------------------------TSVVLMKNGRKV 52 (188)
Q Consensus 8 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----------~~v------------------------~~~~~~~~~~~l 52 (188)
+.++.++.+|.++++|..+|+.+...+... .++ ..++++|+..++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 678888999999999999998876554211 001 156788888887
Q ss_pred EEecC-------------------------------------------CCeEEEEEeCCcccccceeeeccCCceeEE-e
Q 029743 53 VCGSQ-------------------------------------------SGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-L 88 (188)
Q Consensus 53 ~~~~~-------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~ 88 (188)
++... .+.|..||+.+ ++.+..+.. ..+.... +
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~--~~~~~~g~~ 484 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEH--VSPWNGGTL 484 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEE--SSSCCCCEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCC--CCCCcCcce
Confidence 76533 16799999976 455444442 2333333 5
Q ss_pred ecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEE-eC----------------CCcEEEEe
Q 029743 89 KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SH----------------DSMLKLWD 151 (188)
Q Consensus 89 ~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~----------------d~~i~iwd 151 (188)
...+.+++.++.++.+++||.++++.+..+....+....-+.|..+|+.++.. +. .+.+.+|.
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~ 564 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFV 564 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEe
Confidence 67788889999999999999999999988875543234456777888755433 22 36788888
Q ss_pred CCC
Q 029743 152 LDD 154 (188)
Q Consensus 152 ~~~ 154 (188)
+..
T Consensus 565 l~~ 567 (677)
T 1kb0_A 565 VGG 567 (677)
T ss_dssp ETC
T ss_pred ccc
Confidence 874
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.81 E-value=6.1e-07 Score=62.02 Aligned_cols=153 Identities=12% Similarity=0.009 Sum_probs=102.0
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEE-ecCCCeEEEEEeCCcccccceeeecc
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYFKDCSDRFVGLS 80 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~~~ 80 (188)
.|+ ++.+..+.+.++.|+++|+++++.+..+ -.......-..++++.|+. .-.++.+.+||..+ .+.+..+.. .
T Consensus 61 ~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T-l~~~~ti~~-~ 135 (268)
T 3nok_A 61 VFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMP-PQRERTTRY-S 135 (268)
T ss_dssp EEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTT-TEEEEEEEC-S
T ss_pred EEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCc-CcEEEEEeC-C
Confidence 344 3455667777889999999999887776 2333433333445555544 44578999999976 466666664 3
Q ss_pred CCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCC-Cc---ceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 81 PNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-EY---PIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 81 ~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~---~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
... .. ..++++.|+.+..++.|+++|..+.+.+..+.... +. .++.+.|. +|+..+..-.+..|.+.|.++++
T Consensus 136 ~eG-wG-Lt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 136 GEG-WG-LCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp SCC-CC-EEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred Cce-eE-EecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 221 22 34678888887788999999999988777664321 11 34667777 77655555467899999999887
Q ss_pred CCCCCC
Q 029743 157 KGSGNN 162 (188)
Q Consensus 157 ~~~~~~ 162 (188)
....+.
T Consensus 213 V~~~Id 218 (268)
T 3nok_A 213 VVGVID 218 (268)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 554433
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.81 E-value=6.5e-07 Score=62.27 Aligned_cols=148 Identities=9% Similarity=-0.048 Sum_probs=100.3
Q ss_pred cccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-ccCC
Q 029743 5 ADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPN 82 (188)
Q Consensus 5 ~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~ 82 (188)
++++.|+.+. .++.+.++|..+.+.+..++.... ....++++++.++++..++.|.++|..+. +....+.- ....
T Consensus 73 ~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~~I~Vg~~~~ 149 (266)
T 2iwa_A 73 LLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTF-KLIKKHNVKYNGH 149 (266)
T ss_dssp EETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTC-CEEEEEECEETTE
T ss_pred EeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCC-cEEEEEEECCCCc
Confidence 3455665554 478999999999988888763211 23446678888888777889999998763 44444432 0112
Q ss_pred c---eeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccC------------CCcceeEEEeeCCCCEE-EEEeCCC
Q 029743 83 S---VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLALSHDRKFL-GSISHDS 145 (188)
Q Consensus 83 ~---v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l-~~~~~d~ 145 (188)
+ +..+ +. +|...+....++.|.+.|..+++.+..+... .....+.++|+|+++.+ +++...+
T Consensus 150 p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 150 RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 2 3445 45 6755555556889999999999987777532 01145899999998765 5555778
Q ss_pred cEEEEeCCCcc
Q 029743 146 MLKLWDLDDIL 156 (188)
Q Consensus 146 ~i~iwd~~~~~ 156 (188)
.|++.++....
T Consensus 229 ~v~~i~l~~~~ 239 (266)
T 2iwa_A 229 KLFEIKLHLVR 239 (266)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEeccc
Confidence 99998887653
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.81 E-value=4.9e-06 Score=57.77 Aligned_cols=151 Identities=9% Similarity=-0.019 Sum_probs=94.2
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEE-EecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++++|+++.|+.+. ..+.|.+++...+.....+.........+++++++..|+ +-...+.|.+++++. .....+..
T Consensus 41 i~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g--~~~~~~~~ 118 (267)
T 1npe_A 41 LAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG--TQRRVLFD 118 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEC
T ss_pred EEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC--CCEEEEEE
Confidence 35777666666554 467899999876544333332234678999999765555 445567899999863 22333322
Q ss_pred ccCCceeEE-eecCCCEEEEecC---CCeEEEEecccCeeeeecc-cCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGSE---NGLISLVGILPNRIIQPIA-EHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~~---d~~v~~~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (188)
........+ ++|++..|+.+.. .+.|..+++.... ...+. .... ....+++++++..|+.+. ..+.|.++++
T Consensus 119 ~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~-~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLG-LPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCS-CEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCC-CCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 022345666 7886665554443 4688888876432 22221 2212 578999999877665554 5688999998
Q ss_pred CCc
Q 029743 153 DDI 155 (188)
Q Consensus 153 ~~~ 155 (188)
...
T Consensus 197 ~g~ 199 (267)
T 1npe_A 197 AQP 199 (267)
T ss_dssp TEE
T ss_pred CCC
Confidence 754
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=6.3e-07 Score=68.62 Aligned_cols=146 Identities=11% Similarity=0.069 Sum_probs=102.1
Q ss_pred cccCeEEEEeC-CCcEEEEEcCCCceeeeecc-cccceEEEEE-E-eCCCEEEEec------------------CCCeEE
Q 029743 5 ADAMKLLGTSG-DGTLSVCNLRKNTVQTRSEF-SEEELTSVVL-M-KNGRKVVCGS------------------QSGTVL 62 (188)
Q Consensus 5 ~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~d~~i~ 62 (188)
+||++++.... ++.|.+.|+.+.++.+.+.- .......+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 38999888766 45799999999988774431 2345788887 5 8999998884 245788
Q ss_pred EEEeCCcccccceeeeccCCceeEE-eecCCCEEEEecCCC--------------------------------------e
Q 029743 63 LYSWGYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENG--------------------------------------L 103 (188)
Q Consensus 63 ~~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~--------------------------------------~ 103 (188)
+.|..+ .+...++.- ... ...+ ++|+|+++++.+.+. .
T Consensus 179 vID~~t-~~v~~qI~V-gg~-pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 179 AVDADK-WEVAWQVLV-SGN-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEETTT-TEEEEEEEE-SSC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEECCC-CeEEEEEEe-CCC-ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 899876 344444442 233 3334 789999888877442 3
Q ss_pred EEEEeccc--Cee-eeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCCCc
Q 029743 104 ISLVGILP--NRI-IQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDDI 155 (188)
Q Consensus 104 v~~~d~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 155 (188)
|.+.|.++ ++. +..+.... ...++.++|||+++++++ .+.+|.++|+.+.
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred EEEEeCcccCCceeEEEEecCC--CceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 66777766 444 44454432 467899999999887665 6789999999975
No 238
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=1.9e-06 Score=64.29 Aligned_cols=149 Identities=5% Similarity=0.044 Sum_probs=93.3
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC-C----eEEEEEeCCccccc-
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS-G----TVLLYSWGYFKDCS- 73 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~~~d~~~~~~~~- 73 (188)
|+++| ++..|+.+...+.|+.+|+..+....... .......++++++++.|+++... + .+..++.. +...
T Consensus 142 lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~--g~~~~ 218 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE--SGFKV 218 (430)
T ss_dssp EEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG--GTSCS
T ss_pred EEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC--Cceee
Confidence 46787 45667766665888899988766544333 44568899999999966666542 1 23334432 2222
Q ss_pred -ceeeeccCCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEE-eCCCcEEE
Q 029743 74 -DRFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SHDSMLKL 149 (188)
Q Consensus 74 -~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i 149 (188)
..+.. .. ....+ ++| +|.++++-..++.|+.++...+................++|+|++++|+.+ ...+.|..
T Consensus 219 ~~~l~~-~~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 219 ITELTK-GQ-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp EEEEEE-CS-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeecc-CC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 22322 22 23445 688 677666766788999999876654222221111246789999999965544 46788999
Q ss_pred EeCCC
Q 029743 150 WDLDD 154 (188)
Q Consensus 150 wd~~~ 154 (188)
++...
T Consensus 297 ~~~d~ 301 (430)
T 3tc9_A 297 SDYDW 301 (430)
T ss_dssp EEEET
T ss_pred EeCCc
Confidence 87653
No 239
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.72 E-value=7.5e-07 Score=70.92 Aligned_cols=150 Identities=9% Similarity=0.029 Sum_probs=88.4
Q ss_pred eee-cccCeEEEEeC-CC----cEEEEEcCCC-ceee-eecccccceEEEEEEeCCCEEEEecCC-----CeEEEEEeCC
Q 029743 2 TFA-ADAMKLLGTSG-DG----TLSVCNLRKN-TVQT-RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGY 68 (188)
Q Consensus 2 ~~s-~~~~~l~~~~~-d~----~i~i~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~ 68 (188)
+|| |||++|+.+.. +| .|+++|+.++ +.+. .+. .....++|+||++.|+....+ ..|.++++.+
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 689 99999886643 22 4999999988 6321 121 124578899999888776654 2577777765
Q ss_pred cccc-cceeeeccCCceeEE-eecCCCEEEEec---CCCeEEEEecccCe-ee--eecccCCCcceeEEEeeCCCCEEEE
Q 029743 69 FKDC-SDRFVGLSPNSVDAL-LKLDEDRVITGS---ENGLISLVGILPNR-II--QPIAEHSEYPIESLALSHDRKFLGS 140 (188)
Q Consensus 69 ~~~~-~~~~~~~~~~~v~~~-~~~~~~~l~~~~---~d~~v~~~d~~~~~-~~--~~~~~~~~~~v~~~~~~~~~~~l~~ 140 (188)
.... ...+..........+ ++|||++|+... ....|+++|+.++. .. ..+.........++.|+..+.+++.
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~ 336 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVIL 336 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEE
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEE
Confidence 3211 122222022334455 799999887655 23468889987652 12 3333222225566666544444444
Q ss_pred EeCC----CcEEEEeCCC
Q 029743 141 ISHD----SMLKLWDLDD 154 (188)
Q Consensus 141 ~~~d----~~i~iwd~~~ 154 (188)
...+ ..|..+++.+
T Consensus 337 t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 337 TNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp ECTTTCTTCEEEEEETTS
T ss_pred eCCCCCCCcEEEEEcCCC
Confidence 4433 3566677664
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.68 E-value=7.2e-07 Score=70.35 Aligned_cols=129 Identities=11% Similarity=0.041 Sum_probs=89.4
Q ss_pred eEEEEeCCCcEEEEEcCCCceeeeecccc-c--------------------------------------ceEEEEEEeCC
Q 029743 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE-E--------------------------------------ELTSVVLMKNG 49 (188)
Q Consensus 9 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~--------------------------------------~v~~~~~~~~~ 49 (188)
.++.++.+|.++++|..+|+.+...+... . .-..++++|+.
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~ 400 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT 400 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC
Confidence 67888899999999999998864322100 0 01126788887
Q ss_pred CEEEEecC---------------------------------------------CCeEEEEEeCCcccccceeeeccCCce
Q 029743 50 RKVVCGSQ---------------------------------------------SGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (188)
Q Consensus 50 ~~l~~~~~---------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~v 84 (188)
.++++... ++.|..||+.+ ++.+..+.. +....
T Consensus 401 ~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~-~~~~~ 478 (689)
T 1yiq_A 401 GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPY-VTIFN 478 (689)
T ss_dssp TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEE-SSSCC
T ss_pred CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccC-CCCcc
Confidence 77776522 36799999987 455555543 33222
Q ss_pred eEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEE
Q 029743 85 DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLG 139 (188)
Q Consensus 85 ~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 139 (188)
...+...+.+++.++.|+.|+.||.++|+.+.++....+....-+.|..+|+.++
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 3346667889999999999999999999999888765442334577778887554
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.66 E-value=1.3e-05 Score=54.83 Aligned_cols=152 Identities=11% Similarity=0.051 Sum_probs=98.8
Q ss_pred eeecccCeEEEEeCC--CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEE-ecCCCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGTSGD--GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVC-GSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
.|++ +.++.+.+.. +.|+++|+++++.+..+.-. .........+.++.|+. .-.++.+.+||..+ .+.+..+..
T Consensus 27 ~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t-l~~~~ti~~ 103 (243)
T 3mbr_X 27 FYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT-LTPRARFRY 103 (243)
T ss_dssp EEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTT-TEEEEEEEC
T ss_pred EEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCc-CcEEEEEeC
Confidence 4554 4455555554 48999999999988877632 23333333334555544 45678999999976 466666664
Q ss_pred ccCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCC-C---cceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 79 LSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHS-E---YPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 79 ~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
... -..+ .++++.|+.+..++.|.++|..+.+.+..+.... + ..++.+.+. +|+..+..-.+..|.+.|.++
T Consensus 104 -~~~-Gwgl-t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 104 -PGE-GWAL-TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp -SSC-CCEE-EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred -CCC-ceEE-eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 322 2333 4567777777778899999999988777664421 1 135566765 666555444678999999998
Q ss_pred ccCCCC
Q 029743 155 ILKGSG 160 (188)
Q Consensus 155 ~~~~~~ 160 (188)
+.....
T Consensus 180 G~V~~~ 185 (243)
T 3mbr_X 180 GKVVAW 185 (243)
T ss_dssp CBEEEE
T ss_pred CCEEEE
Confidence 875443
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.66 E-value=4.2e-06 Score=59.74 Aligned_cols=149 Identities=9% Similarity=-0.049 Sum_probs=93.0
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeec-------------------ccccceEEEEEEe-CCCEEEEecCCCe
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSE-------------------FSEEELTSVVLMK-NGRKVVCGSQSGT 60 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~-~~~~l~~~~~d~~ 60 (188)
+++++++++++++..++.|..|+...+....... .....+..+++.+ +++ |+++...+.
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~~~~ 102 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDCYYH 102 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEETTTE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEECCCC
Confidence 3677888878888888999999887654321110 0123578999997 554 555544455
Q ss_pred EEEEEeCCcccccceeeec----cCCceeEE-eec-CCCEEEEecC-----------------CCeEEEEecccCeeeee
Q 029743 61 VLLYSWGYFKDCSDRFVGL----SPNSVDAL-LKL-DEDRVITGSE-----------------NGLISLVGILPNRIIQP 117 (188)
Q Consensus 61 i~~~d~~~~~~~~~~~~~~----~~~~v~~~-~~~-~~~~l~~~~~-----------------d~~v~~~d~~~~~~~~~ 117 (188)
+..+|... ..+..+... .......+ +.+ +|++.++-.. .+.|..+|..+++....
T Consensus 103 i~~~d~~~--g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 103 LSVVGSEG--GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEECTTC--EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEEEeCCC--CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 77777653 222222210 11234556 688 8887666432 36788888776654332
Q ss_pred cccCCCcceeEEEeeCCCCEEEEE-eCCCcEEEEeCCC
Q 029743 118 IAEHSEYPIESLALSHDRKFLGSI-SHDSMLKLWDLDD 154 (188)
Q Consensus 118 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~ 154 (188)
.... . ....++++++++.|+.+ ...+.|.+|++..
T Consensus 181 ~~~~-~-~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 181 LKEL-H-VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEE-S-CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred ccCC-c-cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 2222 2 35679999999866555 4568999999875
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.62 E-value=6.7e-06 Score=59.87 Aligned_cols=145 Identities=8% Similarity=-0.018 Sum_probs=94.4
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeeccc---------ccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccccee
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS---------EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 76 (188)
.+..+++++.++.|+.+|.++++.+...... ...+.+ ....++..+++++.++.|..+|..+ ++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~t-G~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSD-GTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTT-CCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCC-CCEEEEE
Confidence 4667888888899999999999887665532 122222 2223466788888899999999876 4444444
Q ss_pred eeccCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcce-----eEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPI-----ESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
.. .. .+.+.....+..+++++.++.|..+|.++++.+..+..... .. ...... +..++.+..++.|..+|
T Consensus 130 ~~-~~-~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 130 KV-AG-EALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EC-SS-CCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC------CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred eC-CC-ceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 33 22 22211111245788888899999999999988776654321 11 222232 34677788889999999
Q ss_pred CCCccC
Q 029743 152 LDDILK 157 (188)
Q Consensus 152 ~~~~~~ 157 (188)
..++..
T Consensus 205 ~~tG~~ 210 (376)
T 3q7m_A 205 MEQGQM 210 (376)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 987654
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.59 E-value=3.6e-05 Score=53.36 Aligned_cols=151 Identities=5% Similarity=-0.112 Sum_probs=91.2
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC---CCeEEEEEeCCccccccee
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ---SGTVLLYSWGYFKDCSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~ 76 (188)
++++|+++.|+.+. ..+.|.++++..................++++|++..|+.+.. .+.|..++++. .....+
T Consensus 84 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~ 161 (267)
T 1npe_A 84 IALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRIL 161 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEE
T ss_pred EEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEE
Confidence 45777666665554 4578888887654322222222245789999997666655543 36788888753 333333
Q ss_pred eeccCCceeEE-eecCCCEEEE-ecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCC
Q 029743 77 VGLSPNSVDAL-LKLDEDRVIT-GSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (188)
Q Consensus 77 ~~~~~~~v~~~-~~~~~~~l~~-~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (188)
..........+ +++++..|+. -...+.|.++++........+... . ....++.. +..|+.+. ..+.|.++|..
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~-~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-Q-YPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-C-SEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-C-CceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 21023345666 6887766554 456789999998755433333322 2 34567664 44555444 56899999998
Q ss_pred CccC
Q 029743 154 DILK 157 (188)
Q Consensus 154 ~~~~ 157 (188)
++..
T Consensus 238 ~g~~ 241 (267)
T 1npe_A 238 ISKE 241 (267)
T ss_dssp TTEE
T ss_pred CCCc
Confidence 7653
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.53 E-value=9.2e-06 Score=56.11 Aligned_cols=136 Identities=10% Similarity=0.041 Sum_probs=90.0
Q ss_pred ecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-ccC
Q 029743 4 AADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSP 81 (188)
Q Consensus 4 s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~ 81 (188)
.++++.|.... .++.+.++|.++.+.+.+++... ....++++++.|+.+..++.|.++|..+. +.+..+.- ...
T Consensus 93 t~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~-~v~~~I~V~~~g 168 (262)
T 3nol_A 93 SDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESL-TPVRTITVTAHG 168 (262)
T ss_dssp EEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTC-SEEEEEECEETT
T ss_pred EEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCC-eEEEEEEeccCC
Confidence 34555665554 47899999999999988887422 22344467888888777788999998763 44444432 012
Q ss_pred Cce---eEEeecCCCEEEEecCCCeEEEEecccCeeeeecccC-----------CCcceeEEEeeCCCCEEEEEeC
Q 029743 82 NSV---DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH-----------SEYPIESLALSHDRKFLGSISH 143 (188)
Q Consensus 82 ~~v---~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~ 143 (188)
.++ ..+-..+|+..+..-.++.|.+.|.++++.+..+... ...-.+.|+|+|+++.|...+.
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 232 2341236765555557889999999999987666432 1124589999998887766663
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.53 E-value=1e-05 Score=58.93 Aligned_cols=136 Identities=12% Similarity=0.127 Sum_probs=90.4
Q ss_pred cCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCceeE
Q 029743 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDA 86 (188)
Q Consensus 7 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 86 (188)
+..++.++.++.+..+|..+++.+..... .....+.. ++..++.++.++.+..+|..++ +.+.............
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~ 313 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGG-VTLWTQSDLLHRLLTS 313 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTC-CEEEEECTTTTSCCCC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCC-cEEEeecccCCCcccC
Confidence 45677778889999999999988766542 22334333 4677888888999999998763 4433332101111111
Q ss_pred EeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCccee-EEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 87 LLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIE-SLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 87 ~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
. ...+..+++++.+|.|..+|.++++.+..+..... .+. .... .+..|+.++.+|.|+.|+
T Consensus 314 ~-~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~-~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 314 P-VLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSS-GFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp C-EEETTEEEEECTTSEEEEEETTTCCEEEEEECCTT-CBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred C-EEECCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-cceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 1 12356888899999999999999998877655322 232 2222 245677888899999987
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=8.1e-06 Score=64.21 Aligned_cols=153 Identities=8% Similarity=0.056 Sum_probs=100.1
Q ss_pred eeecccCeEEEEeCCC-------------------cEEEEEcCCCceeeeecc--cc-------cceEEEEEEeCCC---
Q 029743 2 TFAADAMKLLGTSGDG-------------------TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR--- 50 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~-------------------~i~i~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~--- 50 (188)
+++|+..+++.+..++ .|..+|..+|+.+..++. |. .+.....+..+|+
T Consensus 236 a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~ 315 (668)
T 1kv9_A 236 AYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRK 315 (668)
T ss_dssp EEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred EEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence 4567777888887665 389999999998877763 21 2333333444675
Q ss_pred EEEEecCCCeEEEEEeCCcccccceeeeccC------------Cce------------------------eEE-eecCCC
Q 029743 51 KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP------------NSV------------------------DAL-LKLDED 93 (188)
Q Consensus 51 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~------------~~v------------------------~~~-~~~~~~ 93 (188)
.++.++.+|.++++|..+ ++.+..... .. .++ ..+ ++|+..
T Consensus 316 ~v~~~~~~G~l~~lD~~t-G~~l~~~~~-~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 316 VLMQAPKNGFFYVLDRTN-GKLISAEKF-GKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEECCTTSEEEEEETTT-CCEEEEEES-SCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEECCCCEEEEEECCC-CCEeccccc-cccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 688999999999999876 344321110 00 000 012 456555
Q ss_pred EEEEe------------------------------------cCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCE
Q 029743 94 RVITG------------------------------------SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKF 137 (188)
Q Consensus 94 ~l~~~------------------------------------~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 137 (188)
+++.. ..+|.|..||+.+++.+....... +.....+...+..
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~ 471 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HWNGGTLSTAGNL 471 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--CCcCceeEeCCCE
Confidence 54431 123789999999999887765542 3444455557788
Q ss_pred EEEEeCCCcEEEEeCCCccCC
Q 029743 138 LGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 138 l~~~~~d~~i~iwd~~~~~~~ 158 (188)
++.++.|+.|++||.++++..
T Consensus 472 vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 472 VFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEE
T ss_pred EEEECCcccchhhhhhcChhh
Confidence 888999999999999987643
No 248
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.49 E-value=1.5e-06 Score=63.43 Aligned_cols=125 Identities=11% Similarity=-0.146 Sum_probs=86.4
Q ss_pred cEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec----------CCCeEEEEEeCCcccccceeeecc-------
Q 029743 18 TLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS----------QSGTVLLYSWGYFKDCSDRFVGLS------- 80 (188)
Q Consensus 18 ~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~~~------- 80 (188)
.|.++|..+++.+..++....+ .+.++|+++.++++. .++.|.+||+.+ .+.+..+.- .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T-~~vv~~I~v-~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT-FLPIADIEL-PDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT-CCEEEEEEE-TTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC-CCEEEEEEC-CCcccccc
Confidence 7889999999999988854455 799999999998886 367899999987 455666643 3
Q ss_pred CCceeEE-eecCCCEEEEecC--CCeEEE--EecccCeeeeecccCCCcceeEEEeeCCCC-EEEEEeCCCcEEEEeCCC
Q 029743 81 PNSVDAL-LKLDEDRVITGSE--NGLISL--VGILPNRIIQPIAEHSEYPIESLALSHDRK-FLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 81 ~~~v~~~-~~~~~~~l~~~~~--d~~v~~--~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 154 (188)
......+ ++|||++++++.. ...|.+ +|+.+ +..+... + . +.+.|+++ .+++.+.|+.+.+.++.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~--~--~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-S--C--FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-S--C--CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-C--c--eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 1223455 8999999998864 467888 99877 3444322 1 1 12334443 334455677777777765
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.48 E-value=2.3e-05 Score=53.60 Aligned_cols=133 Identities=9% Similarity=0.018 Sum_probs=87.1
Q ss_pred ccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-ccCCc
Q 029743 6 DAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPNS 83 (188)
Q Consensus 6 ~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~ 83 (188)
.++.|+.. ..++.+.++|.++.+.+.+++... .=..+ .++++.|+.+..++.|.++|..+. +.+..+.- .+..+
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~-~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWAL--TSDDSHLYMSDGTAVIRKLDPDTL-QQVGSIKVTAGGRP 148 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEE--EECSSCEEEECSSSEEEEECTTTC-CEEEEEECEETTEE
T ss_pred eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEE--eeCCCEEEEECCCCeEEEEeCCCC-eEEEEEEEccCCcc
Confidence 34455444 457899999999999988887432 22344 467888887777889999998763 44444432 02222
Q ss_pred ee---EEeecCCCEEEEecCCCeEEEEecccCeeeeecccC------------CCcceeEEEeeCCCCEEEEEe
Q 029743 84 VD---ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 84 v~---~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~ 142 (188)
+. .+-..+|+.++..-.+..|.+.|.++++.+..+... ...-.+.|+++|+++.|...+
T Consensus 149 ~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 149 LDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 22 331236665555556789999999999877665311 122468999999877776555
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.48 E-value=4.4e-06 Score=59.46 Aligned_cols=136 Identities=18% Similarity=0.090 Sum_probs=90.6
Q ss_pred cCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCceeE
Q 029743 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDA 86 (188)
Q Consensus 7 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 86 (188)
+..+..++.++.|..+|.. ++...........+.++...+++. ++.++.++.+..+|.. +.....+.. ....+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~--g~~~~~~~~-~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD--GTEKWRFKT-NDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT--SCEEEEEEC-SSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC--CCEeEEEec-CCCceee
Confidence 4467777888999999988 776666554455566666666666 5567777889999876 344444443 4444555
Q ss_pred E-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 87 L-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 87 ~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
+ ..+++.+++ ++ +.|..+| .+++.+..+..... .+.++...+++.. ..++.++.|..++..
T Consensus 182 ~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l-~v~t~~~gl~~~~~~ 243 (330)
T 3hxj_A 182 ASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW-TVTRPAISEDGTI-YVTSLDGHLYAINPD 243 (330)
T ss_dssp CEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC-CCSCCEECTTSCE-EEEETTTEEEEECTT
T ss_pred eEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc-ceeceEECCCCeE-EEEcCCCeEEEECCC
Confidence 5 356776554 44 7788999 67776666554433 5788888887754 456667778888753
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.46 E-value=2.3e-05 Score=54.25 Aligned_cols=135 Identities=12% Similarity=0.003 Sum_probs=88.5
Q ss_pred ecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-ccC
Q 029743 4 AADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSP 81 (188)
Q Consensus 4 s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~ 81 (188)
.++++.|+.. ..++.+.+||.++.+.+.+++.. ..-..++ ++++.|+.+..++.|.++|..+. +.+..+.- .+.
T Consensus 102 t~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~-~v~~~I~V~~~g 177 (268)
T 3nok_A 102 ASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGF-ALVGAVQVKLRG 177 (268)
T ss_dssp EECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTC-CEEEEEECEETT
T ss_pred EEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCC-eEEEEEEeCCCC
Confidence 3445555554 45789999999999999888743 2223444 57888888877889999998763 44444432 022
Q ss_pred Cce---eEEeecCCCEEEEecCCCeEEEEecccCeeeeecccC------------CCcceeEEEeeCCCCEEEEEe
Q 029743 82 NSV---DALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEH------------SEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 82 ~~v---~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~ 142 (188)
.++ ..+-..+|+.++.....+.|.+.|.++++.+..+... ...-.+.|+++|+++.|...+
T Consensus 178 ~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 178 QPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 222 3332237765555557889999999999877665321 112468999999876665554
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.45 E-value=9e-05 Score=51.22 Aligned_cols=153 Identities=8% Similarity=0.054 Sum_probs=96.2
Q ss_pred CeeecccCeEE-EEeCCCcEEEEEcCCCceeeeec-ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc--cccee
Q 029743 1 MTFAADAMKLL-GTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD--CSDRF 76 (188)
Q Consensus 1 l~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~~ 76 (188)
|+|+|+++.|+ +...++.|...|.. ++.++.++ .-......+++.+++.++++.-.++.+.++++...+. .+...
T Consensus 32 la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 32 LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 47888766655 46677889999988 77777664 2225678999998888777766778899999865432 11111
Q ss_pred e------eccCCceeEE-eecCCCEEEEecCCCeEEEEeccc---Ceeeeec-----c-cCCCcceeEEEeeCCCCEE-E
Q 029743 77 V------GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP---NRIIQPI-----A-EHSEYPIESLALSHDRKFL-G 139 (188)
Q Consensus 77 ~------~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~---~~~~~~~-----~-~~~~~~v~~~~~~~~~~~l-~ 139 (188)
. . .......+ ++|.++.|+++.......+|.++. ...+..+ . ...-..+.+++++|....| +
T Consensus 111 ~~~~~~~~-~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lli 189 (255)
T 3qqz_A 111 KIPLQESP-TNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLV 189 (255)
T ss_dssp ECCCSSCC-CSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEE
T ss_pred cccccccc-ccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEE
Confidence 1 1 22335677 799888888777665555665541 1111111 0 0011257899999965544 5
Q ss_pred EEeCCCcEEEEeCCCc
Q 029743 140 SISHDSMLKLWDLDDI 155 (188)
Q Consensus 140 ~~~~d~~i~iwd~~~~ 155 (188)
.......|.++|....
T Consensus 190 LS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 190 LSHESRALQEVTLVGE 205 (255)
T ss_dssp EETTTTEEEEECTTCC
T ss_pred EECCCCeEEEEcCCCC
Confidence 5556677888887654
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.42 E-value=8.1e-06 Score=58.05 Aligned_cols=141 Identities=11% Similarity=-0.014 Sum_probs=87.8
Q ss_pred ecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCc
Q 029743 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNS 83 (188)
Q Consensus 4 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 83 (188)
.++++ +..++ +.|..+| .+++...........+.++...+++. |..++.++.+..++.. +..+..+.. ....
T Consensus 185 d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~--g~~~~~~~~-~~~~ 256 (330)
T 3hxj_A 185 GKDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD--GTEKWRFKT-GKRI 256 (330)
T ss_dssp CTTCC-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT--SCEEEEEEC-SSCC
T ss_pred cCCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC--CCEeEEeeC-CCCc
Confidence 34554 44444 7888999 67766666554556677888877765 4556667778777642 344444443 3333
Q ss_pred eeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 84 VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 84 v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
+..+ ..+++ .+..++.++.|..+|. +++.+..+..... .+.++...+++. |..++.+|.+++...+...
T Consensus 257 ~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~-~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 257 ESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSW-IIATPVIDENGT-IYFGTRNGKFYALFNLEHH 326 (330)
T ss_dssp CSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSC-CCSCCEECTTCC-EEEECTTSCEEEEEC----
T ss_pred cccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCc-cccceEEcCCCE-EEEEcCCCeEEEEeccccc
Confidence 3333 33344 5677788888999996 6776665554433 577777777775 5567889999988776543
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.41 E-value=3.2e-05 Score=55.15 Aligned_cols=135 Identities=13% Similarity=0.031 Sum_probs=80.7
Q ss_pred CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEe-cCCCeEEEEEeCCcc-cccceeeeccCCceeEE-eecCCC
Q 029743 17 GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFK-DCSDRFVGLSPNSVDAL-LKLDED 93 (188)
Q Consensus 17 ~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~ 93 (188)
+.|..++..+++...... .......++++|+++.|+.+ ...+.|..|++.... .....+.. ... ...+ +.++|+
T Consensus 165 g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSC
T ss_pred ceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCC
Confidence 567778876665432222 12345689999999866655 556899999986321 11122222 223 5566 688998
Q ss_pred EEEEecC----------CCeEEEEecccCeeeeecccCCC---cceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 94 RVITGSE----------NGLISLVGILPNRIIQPIAEHSE---YPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 94 ~l~~~~~----------d~~v~~~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
++++... .+.|..+|.. ++.+..+....+ ..+..+++. +++.+++....+.|.++++....
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC----
T ss_pred EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEeccccc
Confidence 7666544 4668888864 666665543321 146667663 56555665578899999987543
No 255
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=6.8e-05 Score=55.95 Aligned_cols=147 Identities=10% Similarity=0.088 Sum_probs=86.9
Q ss_pred Ceeecc--cCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCC-----eEEEEEeCCccccc
Q 029743 1 MTFAAD--AMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG-----TVLLYSWGYFKDCS 73 (188)
Q Consensus 1 l~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~ 73 (188)
|+++|+ ...|+.+...+.|+.++..++....... .......++++++++ |+.+...+ .+...+.. ....
T Consensus 144 vavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~--~~~~ 219 (433)
T 4hw6_A 144 MMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA--SGFT 219 (433)
T ss_dssp EEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG--GTTC
T ss_pred EEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC--CCee
Confidence 467774 4455555544889999988776654433 445689999999999 44444321 13233221 1111
Q ss_pred --ceeeeccCCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeec-ccCCCcceeEEEeeCCCCEEEEE-eCCCcE
Q 029743 74 --DRFVGLSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSI-SHDSML 147 (188)
Q Consensus 74 --~~~~~~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i 147 (188)
..+.. . .....+ ++| +|.++++-..++.|+.++..++.....+ ..........++|+|++++|+.+ ...+.|
T Consensus 220 ~~~~~~~-~-~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 220 ERLSLCN-A-RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CEEEEEE-C-SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ccccccc-c-CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 11221 2 223334 678 6666666667888999998866652222 11111123569999999966544 456889
Q ss_pred EEEeCC
Q 029743 148 KLWDLD 153 (188)
Q Consensus 148 ~iwd~~ 153 (188)
+.++..
T Consensus 298 ~~~~~d 303 (433)
T 4hw6_A 298 YRVDYN 303 (433)
T ss_dssp EEEEBC
T ss_pred EEEeCC
Confidence 998865
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.36 E-value=0.00028 Score=51.12 Aligned_cols=152 Identities=12% Similarity=-0.008 Sum_probs=91.2
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCE-EEEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRK-VVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|++..+.|+... ..+.|+.+++........+.........+++.+.+.. .++-...+.|.+.+++. .....+..
T Consensus 78 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--~~~~~l~~ 155 (349)
T 3v64_C 78 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--AHRKVLLW 155 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEC
T ss_pred EEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC--CceEEEEe
Confidence 35666555555544 4577888887765433333322345678999875544 45555667899999863 33333322
Q ss_pred ccCCceeEE-eecCCCEEE-EecCC-CeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCCC
Q 029743 79 LSPNSVDAL-LKLDEDRVI-TGSEN-GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDD 154 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~-~~~~d-~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 154 (188)
..-.....+ +.|.+..|+ +-... +.|..+++........+...-. ....|+++|++..|..+. ..+.|..+++..
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~-~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC-CcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 033456677 688655554 44444 7888888764332222222222 578999998777666554 567899999875
Q ss_pred c
Q 029743 155 I 155 (188)
Q Consensus 155 ~ 155 (188)
.
T Consensus 235 ~ 235 (349)
T 3v64_C 235 S 235 (349)
T ss_dssp C
T ss_pred C
Confidence 3
No 257
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.35 E-value=0.00013 Score=55.14 Aligned_cols=152 Identities=7% Similarity=0.063 Sum_probs=90.4
Q ss_pred Ceeec-ccCeEEEEeC-CCcEEEEEcCCCceeeeecc---cccceEEEEE-------EeCCCEEEEecCCC-------eE
Q 029743 1 MTFAA-DAMKLLGTSG-DGTLSVCNLRKNTVQTRSEF---SEEELTSVVL-------MKNGRKVVCGSQSG-------TV 61 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~-------~i 61 (188)
|+|+| +...|+.+.. .+.|++.|++.+........ .......++| +++++.|+++...+ .|
T Consensus 144 la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 144 LAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred EEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 46888 4555555544 46788899888766544432 1235899999 99999777665553 25
Q ss_pred EEEEeCCccccc-----ceeeeccCCceeEEeecC-CCEEEEecCCCeEEEEecc-------cCee-----------eee
Q 029743 62 LLYSWGYFKDCS-----DRFVGLSPNSVDALLKLD-EDRVITGSENGLISLVGIL-------PNRI-----------IQP 117 (188)
Q Consensus 62 ~~~d~~~~~~~~-----~~~~~~~~~~v~~~~~~~-~~~l~~~~~d~~v~~~d~~-------~~~~-----------~~~ 117 (188)
.+++....+... +.+.. ...+.....+|+ +.++++-..++.|..+|+. ++.. ...
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~ 302 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQ 302 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEE
T ss_pred EEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccce
Confidence 555533212221 22322 233332236884 5555566678889999997 4443 111
Q ss_pred -cccCCCcceeEEEeeCCCCEEEEE-eCCCcEEEEeCC
Q 029743 118 -IAEHSEYPIESLALSHDRKFLGSI-SHDSMLKLWDLD 153 (188)
Q Consensus 118 -~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~ 153 (188)
+........+.++|+|++++|+.+ .....|+.++..
T Consensus 303 l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 303 LFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred eEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 111112246789999999965544 456788886643
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.32 E-value=1.8e-05 Score=61.16 Aligned_cols=129 Identities=10% Similarity=-0.017 Sum_probs=82.8
Q ss_pred eEEEEeCCCcEEEEEcCCCceeeeecccc-------------cce--------------------------EEEEEEeCC
Q 029743 9 KLLGTSGDGTLSVCNLRKNTVQTRSEFSE-------------EEL--------------------------TSVVLMKNG 49 (188)
Q Consensus 9 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~~~ 49 (188)
.++.++.+|.++++|..+|+.+...+... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56778889999999999998876554211 111 235778877
Q ss_pred CEEEEec-------------------------------------CCCeEEEEEeCCcccccceeeeccCCceeEE-eecC
Q 029743 50 RKVVCGS-------------------------------------QSGTVLLYSWGYFKDCSDRFVGLSPNSVDAL-LKLD 91 (188)
Q Consensus 50 ~~l~~~~-------------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~-~~~~ 91 (188)
..+++.. .++.+..||+.+ ++.+..+.. ...+... ....
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t-G~~~W~~~~--~~~~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT-GKAKWTKWE--KFAAWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT-CCEEEEEEE--SSCCCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC-CCEEEEecC--CCCccceeEEEC
Confidence 7766643 246788888875 344444432 2222222 3445
Q ss_pred CCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEE
Q 029743 92 EDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGS 140 (188)
Q Consensus 92 ~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 140 (188)
+.++++++.++.|+.+|.++++.+..+..........+.+..+++.++.
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 6778889999999999999999988876543211223445567765543
No 259
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.31 E-value=0.00029 Score=50.76 Aligned_cols=144 Identities=13% Similarity=0.157 Sum_probs=94.4
Q ss_pred cccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeC----CC---EEEEecC---CCeEEEEEeCCcccccc
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKN----GR---KVVCGSQ---SGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---d~~i~~~d~~~~~~~~~ 74 (188)
|...+++.....+-+.+||+ .|+.++.+.. +.++.+...|. |+ ++++... +++|.+|+++.....+.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 34455666677789999999 7888777753 56777777663 22 2333333 47899998853223333
Q ss_pred eeee------ccCCceeEE--e-ecC-CC-EEEEecCCCeEEEEecc-------cCeeeeecccCCCcceeEEEeeCCCC
Q 029743 75 RFVG------LSPNSVDAL--L-KLD-ED-RVITGSENGLISLVGIL-------PNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 75 ~~~~------~~~~~v~~~--~-~~~-~~-~l~~~~~d~~v~~~d~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
.+.. ..-..+..+ + +|. ++ ++++...+|.+..|++. +.+.++++... . .+..+...+...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-s-q~EgcvvDd~~g 192 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-S-QTEGMAADDEYG 192 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-S-CEEEEEEETTTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-C-CcceEEEcCCCC
Confidence 3311 010233333 3 564 44 67788888999999983 34567777665 3 688999999888
Q ss_pred EEEEEeCCCcEEEEeCC
Q 029743 137 FLGSISHDSMLKLWDLD 153 (188)
Q Consensus 137 ~l~~~~~d~~i~iwd~~ 153 (188)
+|+.+-++..|..++.+
T Consensus 193 ~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEETTTEEEEEECS
T ss_pred eEEEecccceEEEEeCC
Confidence 99999888777667754
No 260
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.30 E-value=8e-05 Score=57.54 Aligned_cols=137 Identities=13% Similarity=0.018 Sum_probs=86.0
Q ss_pred cEEEEEcCCCceeeeecc--cc-------cceEEEEEEeCCC---EEEEecCCCeEEEEEeCCcccccceeeeccC----
Q 029743 18 TLSVCNLRKNTVQTRSEF--SE-------EELTSVVLMKNGR---KVVCGSQSGTVLLYSWGYFKDCSDRFVGLSP---- 81 (188)
Q Consensus 18 ~i~i~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---- 81 (188)
.|..+|..+|+.+..++. |. ....-+...++|+ .++.++.+|.+.++|..+ ++.+....- ..
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~~-~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEKV-DPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEES-STTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeecc-cCCccc
Confidence 589999999998877652 11 1111122234674 577888899999999876 344333221 10
Q ss_pred ---------Cce--------------------------eEE-eecCCCEEEEec--------------------------
Q 029743 82 ---------NSV--------------------------DAL-LKLDEDRVITGS-------------------------- 99 (188)
Q Consensus 82 ---------~~v--------------------------~~~-~~~~~~~l~~~~-------------------------- 99 (188)
.++ ..+ ++|+..++++..
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 011 112 466666665542
Q ss_pred -----------CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 100 -----------ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 100 -----------~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
.++.|..||+.+++.+.++.... .+....+...+..++.++.|+.|+.+|.++++..
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCC--CccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 34789999999999877765432 3333333434667777889999999999987654
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.28 E-value=0.00038 Score=49.63 Aligned_cols=149 Identities=9% Similarity=-0.020 Sum_probs=88.9
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCC----CceeeeecccccceEEEEEEeCCCEE-EEecCCCeEEEEEeCCcccccc
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~ 74 (188)
++|++.++.|+.+. ..+.|+.+++.. ......+...-.....+++.+.+..| ++-...+.|.+++++. ....
T Consensus 35 ~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g--~~~~ 112 (316)
T 1ijq_A 35 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK 112 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--SSEE
T ss_pred EEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC--CceE
Confidence 35777666665554 457888888775 22222222222456789998755544 4556678999999863 3333
Q ss_pred ee-eeccCCceeEE-eecCCCEEEEec-CC-CeEEEEecccCeeeeec-ccCCCcceeEEEeeCCCCEEEEEe-CCCcEE
Q 029743 75 RF-VGLSPNSVDAL-LKLDEDRVITGS-EN-GLISLVGILPNRIIQPI-AEHSEYPIESLALSHDRKFLGSIS-HDSMLK 148 (188)
Q Consensus 75 ~~-~~~~~~~v~~~-~~~~~~~l~~~~-~d-~~v~~~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~ 148 (188)
.+ .. .......+ +.|.+..++... .. +.|..+++.. .....+ ...-. ....+++++++..|+.+. ..+.|.
T Consensus 113 ~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~-~P~gla~d~~~~~lY~~D~~~~~I~ 189 (316)
T 1ijq_A 113 TLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQ-WPNGITLDLLSGRLYWVDSKLHSIS 189 (316)
T ss_dssp EEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCC-CceEEEEeccCCEEEEEECCCCeEE
Confidence 33 22 33456677 688666554444 33 6888888753 333332 22212 578999999877776554 557899
Q ss_pred EEeCCC
Q 029743 149 LWDLDD 154 (188)
Q Consensus 149 iwd~~~ 154 (188)
.+|+..
T Consensus 190 ~~d~dg 195 (316)
T 1ijq_A 190 SIDVNG 195 (316)
T ss_dssp EEETTS
T ss_pred EEecCC
Confidence 999875
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.28 E-value=9.5e-05 Score=58.98 Aligned_cols=149 Identities=10% Similarity=0.020 Sum_probs=81.1
Q ss_pred CeeecccCeEEEEeCC-----CcEEEEEcCCCce--eeeec-ccccceEEEEEEeCCCEEEEecC---CCeEEEEEeCCc
Q 029743 1 MTFAADAMKLLGTSGD-----GTLSVCNLRKNTV--QTRSE-FSEEELTSVVLMKNGRKVVCGSQ---SGTVLLYSWGYF 69 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~ 69 (188)
++|+|||+.|+....+ ..|+++++.++.. ...+. ........+.|+|||++|+.... ...|.++|+...
T Consensus 226 ~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp CEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 4799999988877664 2577888876542 12222 22234678899999998876553 346888888653
Q ss_pred cccc--ceeeeccCCceeEE-eecCCCEEEEec-CC----CeEEEEecccCeeeee--cccCCCcceeEEEeeCCCCEE-
Q 029743 70 KDCS--DRFVGLSPNSVDAL-LKLDEDRVITGS-EN----GLISLVGILPNRIIQP--IAEHSEYPIESLALSHDRKFL- 138 (188)
Q Consensus 70 ~~~~--~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d----~~v~~~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l- 138 (188)
.... ..+..........+ ++ .|..|+..+ .+ ..|..+++.++..... +....+..+..+.+. +..|
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv 382 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMH-GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLV 382 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEE-TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEE
T ss_pred CCCceeEEeecCCCCceEEEeee-eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEE
Confidence 2122 33332023333433 23 366554443 32 3577777764222222 222222234555554 4444
Q ss_pred EEEeCCCc--EEEEeC
Q 029743 139 GSISHDSM--LKLWDL 152 (188)
Q Consensus 139 ~~~~~d~~--i~iwd~ 152 (188)
++...++. |.++++
T Consensus 383 ~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 383 VAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEETTEEEEEEEEC
T ss_pred EEEEeCCEEEEEEEec
Confidence 55556664 555665
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.27 E-value=4.5e-05 Score=59.05 Aligned_cols=79 Identities=11% Similarity=0.022 Sum_probs=51.0
Q ss_pred CCeEEEEEeCCcccccceeeeccCCceeE-EeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC
Q 029743 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVDA-LLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 58 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
++.|..||+.+ ++.+-.... . .+... .....+.+++.++.|+.++.||.++|+.+.++....+....-+.+..+|+
T Consensus 465 ~G~l~A~D~~t-G~~~W~~~~-~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 465 VGSLRAMDPVS-GKVVWEHKE-H-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp SEEEEEECTTT-CCEEEEEEE-S-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cceEEEEECCC-CCEEEEecC-C-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 46788888876 344433332 2 12221 12335678888999999999999999999888765432223366767887
Q ss_pred EEE
Q 029743 137 FLG 139 (188)
Q Consensus 137 ~l~ 139 (188)
..+
T Consensus 542 qYv 544 (582)
T 1flg_A 542 QYL 544 (582)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.25 E-value=0.00023 Score=50.85 Aligned_cols=151 Identities=9% Similarity=0.041 Sum_probs=95.6
Q ss_pred eeecccCeEEEEe-CCCcEEEEEcCCCceee-eeccc------ccceEEEEE---EeCCCEEEEec-------------C
Q 029743 2 TFAADAMKLLGTS-GDGTLSVCNLRKNTVQT-RSEFS------EEELTSVVL---MKNGRKVVCGS-------------Q 57 (188)
Q Consensus 2 ~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~-~~~~~------~~~v~~~~~---~~~~~~l~~~~-------------~ 57 (188)
+|.+....+..++ ..++|..|+...+.... .+..- ...+..+.| .|+++++++.. .
T Consensus 19 ~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 19 IYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred cCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence 5666445555555 68999999987654332 23221 114689999 58877777543 2
Q ss_pred CCeEEEEEeC---Ccccccceee--ecc---------C-CceeEE-eecCCCEEEEecCC-CeEEEEecccCeeeeecc-
Q 029743 58 SGTVLLYSWG---YFKDCSDRFV--GLS---------P-NSVDAL-LKLDEDRVITGSEN-GLISLVGILPNRIIQPIA- 119 (188)
Q Consensus 58 d~~i~~~d~~---~~~~~~~~~~--~~~---------~-~~v~~~-~~~~~~~l~~~~~d-~~v~~~d~~~~~~~~~~~- 119 (188)
+..+..||+. +. +.+.... ... . .....+ ..++|+..++++.. +.|...+.... .+..+.
T Consensus 99 ~~~v~~~Dl~~~~tg-~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~ 176 (334)
T 2p9w_A 99 ASSFHSFNLPLSENS-KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAW 176 (334)
T ss_dssp CCEEEEEESSCCTTC-CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEE
T ss_pred CCEEEEEcCCcCCCC-CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeee
Confidence 5779999987 43 3332222 100 1 124445 58899988888877 88877776533 222211
Q ss_pred ----cCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 120 ----EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 120 ----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
.......+.|+++|++..|++....+.|..+|+.+
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 11111367899999999988887799999999884
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.24 E-value=0.00037 Score=49.35 Aligned_cols=147 Identities=16% Similarity=0.150 Sum_probs=84.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCC--eEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~ 78 (188)
++|+|+++++++-...+.|+.++.... ....+. ....+..+++.++++++++..... .|..++... +.. ..+..
T Consensus 37 ia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~-g~~-~~~~~ 112 (306)
T 2p4o_A 37 LASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD-GTV-ETLLT 112 (306)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT-SCE-EEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC-CeE-EEEEe
Confidence 467888886666557789999987654 333332 235688999999998665543322 466666543 232 22222
Q ss_pred c-cCCceeEE-eecCCCEEEEecCCCeEEEEecccCee-ee---------ecccCCCcceeEEEeeCCCCEEEEE-eCCC
Q 029743 79 L-SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI-IQ---------PIAEHSEYPIESLALSHDRKFLGSI-SHDS 145 (188)
Q Consensus 79 ~-~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~-~~---------~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~ 145 (188)
. .......+ ..+.+..+++-..++.|+.+|..++.. +. .....-. ....+ +++++.|+.+ ...+
T Consensus 113 ~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~-~pngi--s~dg~~lyv~d~~~~ 189 (306)
T 2p4o_A 113 LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP-AANGL--KRFGNFLYVSNTEKM 189 (306)
T ss_dssp CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC-SEEEE--EEETTEEEEEETTTT
T ss_pred CCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCC-cCCCc--CcCCCEEEEEeCCCC
Confidence 0 11122233 234444455555688899999765421 11 0001111 34555 7888766554 4568
Q ss_pred cEEEEeCCC
Q 029743 146 MLKLWDLDD 154 (188)
Q Consensus 146 ~i~iwd~~~ 154 (188)
.|..|++..
T Consensus 190 ~I~~~~~~~ 198 (306)
T 2p4o_A 190 LLLRIPVDS 198 (306)
T ss_dssp EEEEEEBCT
T ss_pred EEEEEEeCC
Confidence 999999874
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.22 E-value=0.00044 Score=47.80 Aligned_cols=149 Identities=9% Similarity=0.100 Sum_probs=89.6
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCce---eeeec------ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC--cc
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTV---QTRSE------FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY--FK 70 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~--~~ 70 (188)
++.+++.++++.-.++.+.++++..... +.... ........++|+|.++.|+++.......+|.++. ..
T Consensus 76 a~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~ 155 (255)
T 3qqz_A 76 EYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSS 155 (255)
T ss_dssp EECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCS
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccC
Confidence 5566777666655667888888765332 12221 1234568999999998888777766666666641 11
Q ss_pred cccceeee------ccCCceeEE-eec-CCCEEEEecCCCeEEEEecccCeeeeecccCCC--------cceeEEEeeCC
Q 029743 71 DCSDRFVG------LSPNSVDAL-LKL-DEDRVITGSENGLISLVGILPNRIIQPIAEHSE--------YPIESLALSHD 134 (188)
Q Consensus 71 ~~~~~~~~------~~~~~v~~~-~~~-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~--------~~v~~~~~~~~ 134 (188)
..+..+.. .....+..+ ++| .+.+++.....+.|..+|.+ ++.+..+.-..+ .+...|+|.++
T Consensus 156 ~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 156 NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCC
Confidence 11222210 012245667 677 45566677778889999975 444433321111 15689999999
Q ss_pred CCEEEEEeCCCcEEEEeC
Q 029743 135 RKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 135 ~~~l~~~~~d~~i~iwd~ 152 (188)
|+..+ .++-+.++.|.-
T Consensus 235 G~lyI-vsE~n~~y~f~~ 251 (255)
T 3qqz_A 235 GNIYI-VSEPNRFYRFTP 251 (255)
T ss_dssp CCEEE-EETTTEEEEEEC
T ss_pred CCEEE-EcCCceEEEEEe
Confidence 97554 466777777653
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.22 E-value=0.00016 Score=56.12 Aligned_cols=78 Identities=13% Similarity=0.018 Sum_probs=48.4
Q ss_pred CCeEEEEEeCCcccccceeeeccCCcee-EEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC
Q 029743 58 SGTVLLYSWGYFKDCSDRFVGLSPNSVD-ALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK 136 (188)
Q Consensus 58 d~~i~~~d~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 136 (188)
.+.+.-||+.+ ++.+-.... ..+.. ......+.+++.++.|+.++.||.++|+.+.+++........-+.+..+|+
T Consensus 452 ~G~l~A~D~~t-G~~~W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~ 528 (599)
T 1w6s_A 452 LGQIKAYNAIT-GDYKWEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT 528 (599)
T ss_dssp CEEEEEECTTT-CCEEEEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred cCeEEEEECCC-CCEEeEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCE
Confidence 35677777765 343333321 11111 113345778888999999999999999998887655432333456666776
Q ss_pred EE
Q 029743 137 FL 138 (188)
Q Consensus 137 ~l 138 (188)
.+
T Consensus 529 qy 530 (599)
T 1w6s_A 529 QY 530 (599)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.18 E-value=0.00027 Score=50.02 Aligned_cols=150 Identities=11% Similarity=0.047 Sum_probs=84.7
Q ss_pred CeeecccCeEEEEeCCC--cEEEEEcCCCceeeeec-ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce--
Q 029743 1 MTFAADAMKLLGTSGDG--TLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR-- 75 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-- 75 (188)
++++++|+++++....+ .|..++..+++...... ........++..+++..+++-..++.|..+|.......+..
T Consensus 77 ia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~ 156 (306)
T 2p4o_A 77 LAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH 156 (306)
T ss_dssp EEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEEC
Confidence 46788888655543322 46667777776533222 11223345554454444555445788888886531111110
Q ss_pred -------eeeccCCceeEEeecCCCEEEEe-cCCCeEEEEeccc-Cee--eeecccCCCcceeEEEeeCCCCEEEEEeCC
Q 029743 76 -------FVGLSPNSVDALLKLDEDRVITG-SENGLISLVGILP-NRI--IQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (188)
Q Consensus 76 -------~~~~~~~~v~~~~~~~~~~l~~~-~~d~~v~~~d~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 144 (188)
... .-.....+ +|+++.|+.+ ...+.|..+++.. +.. ...+... . ....+++.++|+++++....
T Consensus 157 ~~~~~~~~~~-~~~~pngi-s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~-~P~gi~vd~dG~l~va~~~~ 232 (306)
T 2p4o_A 157 PMLARSNSES-VFPAANGL-KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-T-NIDDFAFDVEGNLYGATHIY 232 (306)
T ss_dssp GGGSCSSTTC-CSCSEEEE-EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-C-CCSSEEEBTTCCEEEECBTT
T ss_pred CccccccccC-CCCcCCCc-CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-C-CCCCeEECCCCCEEEEeCCC
Confidence 001 11123344 8888766554 5678899999864 321 1111111 2 35678999999877766677
Q ss_pred CcEEEEeCCC
Q 029743 145 SMLKLWDLDD 154 (188)
Q Consensus 145 ~~i~iwd~~~ 154 (188)
+.|.+++...
T Consensus 233 ~~V~~~~~~G 242 (306)
T 2p4o_A 233 NSVVRIAPDR 242 (306)
T ss_dssp CCEEEECTTC
T ss_pred CeEEEECCCC
Confidence 8999998763
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.16 E-value=0.00046 Score=50.68 Aligned_cols=152 Identities=11% Similarity=-0.009 Sum_probs=90.2
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEE-EEecCCCeEEEEEeCCcccccceeee
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++|++.++.|+... ..+.|+.+++........+.........+++.+.+..| ++-...+.|.+.+++. .....+..
T Consensus 121 l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg--~~~~~l~~ 198 (386)
T 3v65_B 121 LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--AHRKVLLW 198 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS--CSCEEEEC
T ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC--CceEEeec
Confidence 35666555555443 45778888877654433333223355788888755544 4555567888888753 33333322
Q ss_pred ccCCceeEE-eecCCCEEEEec-CC-CeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCCC
Q 029743 79 LSPNSVDAL-LKLDEDRVITGS-EN-GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDD 154 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~~-~d-~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 154 (188)
..-.....+ +.|.+..|+... .. +.|..+++........+...-. ....|+++|++..|+.+. ..+.|..+++..
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~-~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS-CEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC-CeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 033456677 688666555443 44 6788888764332222222222 578999998777665554 567899999875
Q ss_pred c
Q 029743 155 I 155 (188)
Q Consensus 155 ~ 155 (188)
.
T Consensus 278 ~ 278 (386)
T 3v65_B 278 S 278 (386)
T ss_dssp C
T ss_pred C
Confidence 3
No 270
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.14 E-value=0.00016 Score=55.95 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=40.1
Q ss_pred CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 101 NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 101 d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
+|.|..||+.+++.+.+..... ++..-.....+..++.++.|+.|+.||.++++..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 5789999999998877665432 2332222334667888999999999999988754
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.11 E-value=0.0013 Score=48.61 Aligned_cols=153 Identities=9% Similarity=-0.053 Sum_probs=89.9
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCC----ceeeeecccccceEEEEEEeCC-CEEEEecCCCeEEEEEeCCcccccc
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMKNG-RKVVCGSQSGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~ 74 (188)
|+|++..+.|+.+. ..+.|+.+++... .....+.........+++.+.+ ++.++-...+.|.+.+++. ....
T Consensus 117 l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g--~~~~ 194 (400)
T 3p5b_L 117 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK 194 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT--CSEE
T ss_pred EeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC--CceE
Confidence 35666555555554 3567777776542 1222222233467889998844 4445555677888888763 3333
Q ss_pred eeeeccCCceeEE-eecCCCEEEEec-C-CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEE
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGS-E-NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLW 150 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~-~-d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw 150 (188)
.+....-.....+ +.|.+.+|+... . .+.|...++........+...-. ....|++++++..|+.+. ..+.|..+
T Consensus 195 ~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~-~P~glavd~~~~~lY~aD~~~~~I~~~ 273 (400)
T 3p5b_L 195 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSGRLYWVDSKLHSISSI 273 (400)
T ss_dssp EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCC-ceEEEEEEeCCCEEEEEECCCCEEEEE
Confidence 3322033446777 688666555443 2 46788888864333222222223 578999998877776664 45789999
Q ss_pred eCCCcc
Q 029743 151 DLDDIL 156 (188)
Q Consensus 151 d~~~~~ 156 (188)
|+....
T Consensus 274 d~dG~~ 279 (400)
T 3p5b_L 274 DVNGGN 279 (400)
T ss_dssp ETTSCC
T ss_pred eCCCCc
Confidence 987543
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.08 E-value=0.0011 Score=48.65 Aligned_cols=150 Identities=11% Similarity=-0.029 Sum_probs=85.1
Q ss_pred eeecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC-C-CeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ-S-GTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.+..|+.+ ...+.|.+.++........+...-.....+++.|.+..|+.+.. . +.|..++++ +.....+..
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 242 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRIIAD 242 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC--CCCcEEEEE
Confidence 455544444443 33456777666544332233333356789999987666655443 3 577777775 333333332
Q ss_pred ccCCceeEE-eecCCCEEEE-ecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 79 LSPNSVDAL-LKLDEDRVIT-GSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~-~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
..-.....+ ++|++..|+. -...+.|..+++........+..... ....|++. .+..+.+-...+.|..++..++
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~-~P~giav~-~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP-HPFAITVF-EDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCS-SEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCC-CceEEEEE-CCEEEEeeCCCCeEEEEECCCC
Confidence 023345677 7876665554 45677899999864333222322223 46778884 4444555556778888885443
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.07 E-value=0.00047 Score=53.56 Aligned_cols=57 Identities=14% Similarity=-0.055 Sum_probs=39.1
Q ss_pred CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 100 ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 100 ~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
..|.|..||+.+++.+.+..... ++..-.+...+..++.++.|+.|+.||.++++..
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 34789999999998877664321 2222122335667777899999999999987643
No 274
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.06 E-value=0.00022 Score=56.14 Aligned_cols=149 Identities=17% Similarity=0.137 Sum_probs=93.8
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeecccc----cceEE-EEEEeCCCEEEEecC------CCeEEEEEeCCcccccc
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSE----EELTS-VVLMKNGRKVVCGSQ------SGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~ 74 (188)
.+..+++++.++.|+.+|..+|+.+....... ..+.+ ... .+..++++.. ++.|..+|..+ ++.+.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W 192 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADT-GKLAW 192 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTT-CCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCC-CcEEE
Confidence 35678888889999999999999887765321 11111 111 1334555443 57899999876 34444
Q ss_pred eeeeccC-------------------------------CceeEE-eecCCCEEEEecCCC-------------------e
Q 029743 75 RFVGLSP-------------------------------NSVDAL-LKLDEDRVITGSENG-------------------L 103 (188)
Q Consensus 75 ~~~~~~~-------------------------------~~v~~~-~~~~~~~l~~~~~d~-------------------~ 103 (188)
.+.. .. .....+ +.|+..+++.+..++ .
T Consensus 193 ~~~~-~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~ 271 (668)
T 1kv9_A 193 RFYT-VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSS 271 (668)
T ss_dssp EEES-SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred Eecc-cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 3321 00 001123 577778888887665 3
Q ss_pred EEEEecccCeeeeecccCC-C-------cceeEEEeeCCCC---EEEEEeCCCcEEEEeCCCccCC
Q 029743 104 ISLVGILPNRIIQPIAEHS-E-------YPIESLALSHDRK---FLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 104 v~~~d~~~~~~~~~~~~~~-~-------~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
|..+|.++|+.+..++... . .+.....+..+++ .++.++.+|.++++|..+++..
T Consensus 272 v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 272 ILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 9999999999887765421 1 1222223334665 6888889999999999887643
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.02 E-value=0.0011 Score=49.50 Aligned_cols=150 Identities=7% Similarity=-0.005 Sum_probs=86.8
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeee-c-ccccceEEEEEEeCCCEEEEe-cCCCeEEEEEeCCccccc---
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRS-E-FSEEELTSVVLMKNGRKVVCG-SQSGTVLLYSWGYFKDCS--- 73 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~--- 73 (188)
++++| ++++.++-..++.|+.++..++.....+ . +.......++++|+++.|+.+ ...+.|+.++++.....+
T Consensus 233 iavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~ 312 (433)
T 4hw6_A 233 CAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP 312 (433)
T ss_dssp CEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC
T ss_pred EEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE
Confidence 46778 5554445445678999998766552222 2 112233579999999855544 456789998875311111
Q ss_pred ceeeecc---------------CCceeEE-e---------ecCCCEEEEecCCCeEEEEecccCeeeeecccCC------
Q 029743 74 DRFVGLS---------------PNSVDAL-L---------KLDEDRVITGSENGLISLVGILPNRIIQPIAEHS------ 122 (188)
Q Consensus 74 ~~~~~~~---------------~~~v~~~-~---------~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~------ 122 (188)
..+.+ . -.....+ + .++|.++++-...+.|+.++. .+... ++.+..
T Consensus 313 ~~~ag-~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G 389 (433)
T 4hw6_A 313 YIVCG-QHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWG 389 (433)
T ss_dssp EEEEE-CTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSC
T ss_pred EEEEe-cCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccc
Confidence 12222 1 0123445 5 456666666667788999885 45432 221110
Q ss_pred --C---------cceeEEEee-CCCCEEEEEeCCCcEEEEeCC
Q 029743 123 --E---------YPIESLALS-HDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 123 --~---------~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~ 153 (188)
. .....|++. +++.++++-...+.|+.++++
T Consensus 390 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 390 YVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 0 136789999 566655555566788887764
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.95 E-value=0.0013 Score=49.87 Aligned_cols=155 Identities=12% Similarity=0.056 Sum_probs=89.0
Q ss_pred CeeecccCeEE-EEeCCCcEEEEEcC-------CCce-----------eee-ec-ccccceEEEEEEeCCCEEEEe-cCC
Q 029743 1 MTFAADAMKLL-GTSGDGTLSVCNLR-------KNTV-----------QTR-SE-FSEEELTSVVLMKNGRKVVCG-SQS 58 (188)
Q Consensus 1 l~~s~~~~~l~-~~~~d~~i~i~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~~~~~~l~~~-~~d 58 (188)
++++|++..|+ +-..++.|+.+|+. ++.. ... +. +.......++|+|+++.|+.+ ...
T Consensus 252 iavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~ 331 (496)
T 3kya_A 252 ATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN 331 (496)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred EEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC
Confidence 35678555555 44566789999987 4443 111 11 223446799999999965554 556
Q ss_pred CeEEEEEeCCccccc---ceeeecc---C------------Ccee-EEe-e-------cCCCEEEEecCCCeEEEEeccc
Q 029743 59 GTVLLYSWGYFKDCS---DRFVGLS---P------------NSVD-ALL-K-------LDEDRVITGSENGLISLVGILP 111 (188)
Q Consensus 59 ~~i~~~d~~~~~~~~---~~~~~~~---~------------~~v~-~~~-~-------~~~~~l~~~~~d~~v~~~d~~~ 111 (188)
+.|+.++.+.....+ ..+.+ . . .... .++ . ++|.++++=..++.|+.++. +
T Consensus 332 h~I~kid~dg~~~~~~~~~~~aG-~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~ 409 (496)
T 3kya_A 332 HYFMRSDYDEIKKEFITPYNFVG-GYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-E 409 (496)
T ss_dssp TEEEEEEEETTTTEECCCEEEEE-BTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-T
T ss_pred CEEEEEecCCCcceecccEEecC-CCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-C
Confidence 788887764311111 22222 1 0 1122 333 3 45566666667888999984 4
Q ss_pred CeeeeecccC--------------CC---------cceeEEEeeCC-CCEEEEEeCCCcEEEEeCCCccCC
Q 029743 112 NRIIQPIAEH--------------SE---------YPIESLALSHD-RKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 112 ~~~~~~~~~~--------------~~---------~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
+. +.++.+. .+ .....|++.++ +.++++=.....|+.++++.....
T Consensus 410 G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 410 GI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp CB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred CC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 53 3333221 01 13678999986 665555556788999988765544
No 277
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.93 E-value=0.0025 Score=46.05 Aligned_cols=150 Identities=11% Similarity=-0.033 Sum_probs=85.5
Q ss_pred eeecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec-CC-CeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS-QS-GTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.+..|+.+ ...+.|.+.++........+...-.....+++.|.+..|+.+. .. +.|..++++ +.....+..
T Consensus 122 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 199 (349)
T 3v64_C 122 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRRIIAD 199 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEESCC
T ss_pred EEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCCcEEEEE
Confidence 455544444444 3456788888765433323333335678999999665555443 34 678888875 333333322
Q ss_pred ccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 79 LSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
..-.....+ ++|++..|+.+ ...+.|..+++........+..... ....+++. .+..+.+-...+.|..++..++
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~-~P~giav~-~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLP-HPFAITVF-EDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-SEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCC-CceEEEEE-CCEEEEecCCCCeEEEEEccCC
Confidence 023345677 78766655544 4677899999864332222322223 46778884 4444445556678888874443
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.92 E-value=0.0024 Score=45.55 Aligned_cols=150 Identities=10% Similarity=-0.022 Sum_probs=88.3
Q ss_pred eeecccCeEEEEe-CCCcEEEEEcCCCcee-eeecccccceEEEEEEeCCC-EEEEecCCCeEEEEEeCCcccccceee-
Q 029743 2 TFAADAMKLLGTS-GDGTLSVCNLRKNTVQ-TRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSDRFV- 77 (188)
Q Consensus 2 ~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~- 77 (188)
+|++.++.|+.+. ..+.|+.+++..+... ..+...-.....+++.+.+. +.++-...+.|.+++++. .....+.
T Consensus 41 d~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--~~~~~l~~ 118 (318)
T 3sov_A 41 DFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG--SLRKVLFW 118 (318)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEEC
T ss_pred EEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC--CcEEEEEe
Confidence 4666545554443 4567777777654321 12222223567888987554 445555677899999863 3333332
Q ss_pred eccCCceeEE-eecCCCEEEEec--CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCC
Q 029743 78 GLSPNSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (188)
. .......+ +.|.+..|+... ..+.|...++........+...-. ....|++++++..|+.+. ..+.|..+++.
T Consensus 119 ~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~-~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 119 Q-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY-WPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp S-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCC-CccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 3 33456677 688666555544 357888888763322222222212 568999999777766554 56789999987
Q ss_pred Cc
Q 029743 154 DI 155 (188)
Q Consensus 154 ~~ 155 (188)
..
T Consensus 197 G~ 198 (318)
T 3sov_A 197 GT 198 (318)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.88 E-value=0.0057 Score=49.15 Aligned_cols=152 Identities=9% Similarity=-0.042 Sum_probs=88.1
Q ss_pred eeecccCeEEEEe-CCCcEEEEEcCCC----ceeeeecccccceEEEEEEeCCCEEE-EecCCCeEEEEEeCCcccccce
Q 029743 2 TFAADAMKLLGTS-GDGTLSVCNLRKN----TVQTRSEFSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYFKDCSDR 75 (188)
Q Consensus 2 ~~s~~~~~l~~~~-~d~~i~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~ 75 (188)
+|++..+.|+.+. ..+.|+.+++... .....+.........|++.+.++.|+ +-...+.|.+.+++. .....
T Consensus 430 ~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG--~~~~~ 507 (791)
T 3m0c_C 430 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRKT 507 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--SSEEE
T ss_pred eecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC--CeEEE
Confidence 4555444444443 3456776776542 22222322334567899988775555 555567899999863 33333
Q ss_pred eeeccCCceeEE-eecCCCEEEEec-C-CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEe
Q 029743 76 FVGLSPNSVDAL-LKLDEDRVITGS-E-NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWD 151 (188)
Q Consensus 76 ~~~~~~~~v~~~-~~~~~~~l~~~~-~-d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd 151 (188)
+....-.....| +.|.+.+|+... . .+.|...++........+...-. ....|++.+.+..|+.+. ....|..++
T Consensus 508 l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~-~P~GLavD~~~~~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 508 LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSGRLYWVDSKLHSISSID 586 (791)
T ss_dssp EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC-CceEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 432033456777 688755555443 3 36788888864433333332223 678999998777776654 456788888
Q ss_pred CCCcc
Q 029743 152 LDDIL 156 (188)
Q Consensus 152 ~~~~~ 156 (188)
+....
T Consensus 587 ~dG~~ 591 (791)
T 3m0c_C 587 VNGGN 591 (791)
T ss_dssp TTSCS
T ss_pred cCCCc
Confidence 86543
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.0024 Score=47.62 Aligned_cols=151 Identities=9% Similarity=0.054 Sum_probs=85.0
Q ss_pred Ceeec-ccCeEEEEeCCCcEEEEEcCCCceeeeec-ccccceEEEEEEeCCCEEE-EecCCCeEEEEEeCCc-ccc--cc
Q 029743 1 MTFAA-DAMKLLGTSGDGTLSVCNLRKNTVQTRSE-FSEEELTSVVLMKNGRKVV-CGSQSGTVLLYSWGYF-KDC--SD 74 (188)
Q Consensus 1 l~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~-~~~--~~ 74 (188)
++++| ++.++++-...+.|+.++...+....... ........++|+|++++|+ +-...+.|..++.+.. +.. ..
T Consensus 231 iavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~ 310 (430)
T 3tc9_A 231 AETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPY 310 (430)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred EEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceE
Confidence 35778 55555555567889999987665422222 1223567999999999554 4456778999887531 111 12
Q ss_pred eeeecc---------------CCcee-EEe-e--------cCCCEEEEecCCCeEEEEecccCeeeeeccc----CC---
Q 029743 75 RFVGLS---------------PNSVD-ALL-K--------LDEDRVITGSENGLISLVGILPNRIIQPIAE----HS--- 122 (188)
Q Consensus 75 ~~~~~~---------------~~~v~-~~~-~--------~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~----~~--- 122 (188)
.+.+ . -.... .++ . ++|.++++-...+.|+.++. .+........ ..
T Consensus 311 ~~ag-~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~ 388 (430)
T 3tc9_A 311 IVCG-QQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYN 388 (430)
T ss_dssp EEEE-CTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCB
T ss_pred EEec-cCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCccc
Confidence 2222 1 00112 232 2 23555555556778888883 4543222110 00
Q ss_pred C---------cceeEEEeeCC-CCEEEEEeCCCcEEEEeCC
Q 029743 123 E---------YPIESLALSHD-RKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 123 ~---------~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~ 153 (188)
+ .....+++.++ +.++++-.....|+.++++
T Consensus 389 dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 389 DGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 0 14688999995 5555555566788887764
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.84 E-value=0.00018 Score=56.97 Aligned_cols=152 Identities=10% Similarity=-0.043 Sum_probs=85.7
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCC----CceeeeecccccceEEEEEEeCCC-EEEEecCCCeEEEEEeCCcccccc
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGR-KVVCGSQSGTVLLYSWGYFKDCSD 74 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~ 74 (188)
|+|++.++.|+.+. ..+.|+.+++.. ......+.........|++.+.+. ++++-...+.|.++++.. ....
T Consensus 411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg--~~~~ 488 (699)
T 1n7d_A 411 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG--VKRK 488 (699)
T ss_dssp CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS--CCEE
T ss_pred EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC--CceE
Confidence 46777666666654 357888888765 222222221223456788876444 444445567898888763 3333
Q ss_pred eeeeccCCceeEE-eecCCCEEEEec-C-CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEE-eCCCcEEEE
Q 029743 75 RFVGLSPNSVDAL-LKLDEDRVITGS-E-NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI-SHDSMLKLW 150 (188)
Q Consensus 75 ~~~~~~~~~v~~~-~~~~~~~l~~~~-~-d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw 150 (188)
.+..........+ +.|.+.+|+... . .+.|..+++........+...-. ....|+|+|++..|+.+ ...+.|.++
T Consensus 489 ~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~-~PnGlavd~~~~~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 489 TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSGRLYWVDSKLHSISSI 567 (699)
T ss_dssp EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCS-SCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCC-CccEEEEeccCCEEEEEecCCCeEEEE
Confidence 3322022344556 577655555443 2 36788877753322212222212 46789999976666544 456789999
Q ss_pred eCCCc
Q 029743 151 DLDDI 155 (188)
Q Consensus 151 d~~~~ 155 (188)
++...
T Consensus 568 d~dG~ 572 (699)
T 1n7d_A 568 DVNGG 572 (699)
T ss_dssp CSSSS
T ss_pred ccCCC
Confidence 98653
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.83 E-value=0.00033 Score=54.97 Aligned_cols=112 Identities=13% Similarity=-0.014 Sum_probs=69.2
Q ss_pred eeec-ccCeEEEEeCCC-----------cEEEEEcCCCcee--eeec-ccccceEEEEEEeCCCEEEEecC-CCeEEEEE
Q 029743 2 TFAA-DAMKLLGTSGDG-----------TLSVCNLRKNTVQ--TRSE-FSEEELTSVVLMKNGRKVVCGSQ-SGTVLLYS 65 (188)
Q Consensus 2 ~~s~-~~~~l~~~~~d~-----------~i~i~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d 65 (188)
++.| +++.++.|+.+. .+.+||+.+++-. ..+. .+.....++++..+++.+++|+. +..+.+||
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYD 271 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEE
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEec
Confidence 4556 788888887542 5788998876432 2222 12233445777789999999884 45799999
Q ss_pred eCCcc-cccceeeeccCCceeEEeecCCCEEEEec-CC-----CeEEEEecccCee
Q 029743 66 WGYFK-DCSDRFVGLSPNSVDALLKLDEDRVITGS-EN-----GLISLVGILPNRI 114 (188)
Q Consensus 66 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d-----~~v~~~d~~~~~~ 114 (188)
..+.. ..+..+.. ......++..++|++++.|+ .+ ..+.+||..+.+-
T Consensus 272 ~~t~~W~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 272 SSSDSWIPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp GGGTEEEECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CcCCceeECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 86421 11111111 12222233567899999988 34 4689999987653
No 283
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.81 E-value=0.0051 Score=45.57 Aligned_cols=142 Identities=13% Similarity=0.177 Sum_probs=87.1
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeeccc----ccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc---------cc
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFS----EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK---------DC 72 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~---------~~ 72 (188)
+|..++.+ .++.||..++..+...+.+... -..+..+..+|+|++|+..+.. .|.+-.+..+. ..
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccc
Confidence 33344443 2366776676644333444322 2257889999999999988654 78888886211 01
Q ss_pred cc--eeee-----ccCCceeEE-eec---CCCEEEEecCCCeEEEEecccC--eeeeecccCC--------CcceeEEEe
Q 029743 73 SD--RFVG-----LSPNSVDAL-LKL---DEDRVITGSENGLISLVGILPN--RIIQPIAEHS--------EYPIESLAL 131 (188)
Q Consensus 73 ~~--~~~~-----~~~~~v~~~-~~~---~~~~l~~~~~d~~v~~~d~~~~--~~~~~~~~~~--------~~~v~~~~~ 131 (188)
++ .+.- ....+|..+ |+| .+..|++-..|+.|++||+... ++. .+.... ...|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 11 1211 013457777 887 4668999999999999999752 222 221110 025889999
Q ss_pred eCCCCEEEEEe--CCCcEEEE
Q 029743 132 SHDRKFLGSIS--HDSMLKLW 150 (188)
Q Consensus 132 ~~~~~~l~~~~--~d~~i~iw 150 (188)
..++-.|...+ ..|.|+-.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEEecCCCCCEEEE
Confidence 99887776644 67776654
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.77 E-value=0.0051 Score=44.43 Aligned_cols=136 Identities=16% Similarity=0.183 Sum_probs=86.8
Q ss_pred CCcEEEEEcC--CCceeeeecc------cc-cceEEEEE--EeC-CC-EEEEecCCCeEEEEEeCC------ccccccee
Q 029743 16 DGTLSVCNLR--KNTVQTRSEF------SE-EELTSVVL--MKN-GR-KVVCGSQSGTVLLYSWGY------FKDCSDRF 76 (188)
Q Consensus 16 d~~i~i~~~~--~~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~i~~~d~~~------~~~~~~~~ 76 (188)
+++|.+|++. ++. +..+.. .. ..+..+++ +|. ++ ++++...++.+..|++.. ..+.++.+
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 4789999773 333 333311 11 45677777 664 43 688888899999999832 12445666
Q ss_pred eeccCCceeEEeecCCCEEEEecCCCeEEEEecc-----cCeeeeecc-cCCCcceeEEEee--CCCC-EEEEEe-CCCc
Q 029743 77 VGLSPNSVDALLKLDEDRVITGSENGLISLVGIL-----PNRIIQPIA-EHSEYPIESLALS--HDRK-FLGSIS-HDSM 146 (188)
Q Consensus 77 ~~~~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~-----~~~~~~~~~-~~~~~~v~~~~~~--~~~~-~l~~~~-~d~~ 146 (188)
.- ...+-.|+..+...+|+.+-.+.-|..++.+ +++.+..+. ++-...+..|++. ++++ +|++++ .++.
T Consensus 177 ~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred cC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 54 4333344478888899999988778888855 234444442 2212257888884 4555 666555 6779
Q ss_pred EEEEeCC
Q 029743 147 LKLWDLD 153 (188)
Q Consensus 147 i~iwd~~ 153 (188)
+.+||.+
T Consensus 256 ~~Vydr~ 262 (355)
T 3amr_A 256 YAIYDRQ 262 (355)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999996
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.74 E-value=0.0052 Score=43.85 Aligned_cols=151 Identities=9% Similarity=-0.079 Sum_probs=86.5
Q ss_pred eeecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC--CCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.+..|+.+ ...+.|.++++........+.........+++.|.+..|+.+.. .+.|...+++ +.....+..
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~ 162 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIIIN 162 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCeEEEEE
Confidence 445434444433 34567777777644332222233456789999997666665542 5678777775 333333322
Q ss_pred ccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 79 LSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
..-.....+ ++|++..|+.+ ...+.|..+++........+..... ....+++.. +..+.+-...+.|..++..++.
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~-~P~glav~~-~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP-HPFALTLFE-DILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCS-CEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCC-CceEEEEeC-CEEEEEecCCCeEEEEECCCCC
Confidence 023345677 78866655554 5678899999864332222222223 467788753 3344455566889989886554
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.63 E-value=0.0096 Score=43.90 Aligned_cols=151 Identities=13% Similarity=-0.079 Sum_probs=86.1
Q ss_pred eeecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC--CCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.++.|+.+ ...+.|.+.++........+.........|++.|.+..|+.+.. .+.|...+++ +.....+..
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G~~~~~~~~ 242 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVT 242 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT--SCSCEEEEC
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC--CCccEEEEE
Confidence 445533444433 34567777776654443333333445789999997666665542 3678888775 344333332
Q ss_pred ccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeeccc--CCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 79 LSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAE--HSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
..-.....+ +++++..|+.+ ...+.|..+|+........+.. ... ....+++. .+..+.+-...+.|..++..+
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~-~P~gl~v~-~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA-HPFSLAVF-EDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTS-SEEEEEEE-TTEEEEEESSSCSEEEEESSS
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCC-CCEEEEEe-CCEEEEecCCCCeEEEEEcCC
Confidence 033456777 78777666655 4567899999865433222222 112 35567774 333444555667888888655
Q ss_pred cc
Q 029743 155 IL 156 (188)
Q Consensus 155 ~~ 156 (188)
+.
T Consensus 321 G~ 322 (400)
T 3p5b_L 321 GS 322 (400)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 287
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.63 E-value=0.0077 Score=42.82 Aligned_cols=150 Identities=13% Similarity=-0.063 Sum_probs=87.1
Q ss_pred eeecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC--CeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--GTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.++.|+.+ ...+.|.++++........+.........+++.|.+..|+.+... +.|...+++ +.....+..
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~~~~~~~~ 160 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVT 160 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEEEC
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CCCeEEEEE
Confidence 455544444444 456778888876543332333233567899999966666555443 678888775 333333322
Q ss_pred ccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeec-cc--CCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCC
Q 029743 79 LSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPI-AE--HSEYPIESLALSHDRKFLGSISHDSMLKLWDLD 153 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 153 (188)
..-.....+ +++++..|+.+ ...+.|..+|+.... ...+ .. ... ....+++. .+..+++-...+.|..++..
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~-~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLA-HPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTS-SEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccC-CcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 023445667 68876666554 466789999987432 2222 11 112 45678885 34445555567888888875
Q ss_pred Ccc
Q 029743 154 DIL 156 (188)
Q Consensus 154 ~~~ 156 (188)
++.
T Consensus 238 ~g~ 240 (316)
T 1ijq_A 238 TGS 240 (316)
T ss_dssp TCC
T ss_pred CCc
Confidence 443
No 288
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.63 E-value=0.014 Score=46.81 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=86.6
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeecc--------cccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee---
Q 029743 10 LLGTSGDGTLSVCNLRKNTVQTRSEF--------SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG--- 78 (188)
Q Consensus 10 l~~~~~d~~i~i~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--- 78 (188)
|-.|+.++-|..|+..++........ ....|.+++..++++.|..|+.++-+.++|.... . ...+..
T Consensus 370 lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~-~-~~~~~~~~~ 447 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG-Q-VENFNQRNS 447 (795)
T ss_dssp EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC-C-EEEECTTTS
T ss_pred EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC-c-EEEeecCCC
Confidence 44566666788888776654332211 1356889988888885677777777999997642 2 222221
Q ss_pred -ccCCceeEEe-ecCCCEEEEecCCCeEEEEecccCeeeeeccc-----CCCcceeEEEeeCCCCEEEEEeCCCcEEEEe
Q 029743 79 -LSPNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAE-----HSEYPIESLALSHDRKFLGSISHDSMLKLWD 151 (188)
Q Consensus 79 -~~~~~v~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 151 (188)
.....+.+++ .++|.+.+.. .. -|.+|+..+++....... .....|.++...+++...+.. . +.|..|+
T Consensus 448 ~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~ 523 (795)
T 4a2l_A 448 QLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFK 523 (795)
T ss_dssp CCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEE
T ss_pred CcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEe
Confidence 0234677774 6677755544 44 488899877654332211 111268899888888766544 3 5688888
Q ss_pred CCCcc
Q 029743 152 LDDIL 156 (188)
Q Consensus 152 ~~~~~ 156 (188)
..+..
T Consensus 524 ~~~~~ 528 (795)
T 4a2l_A 524 QEGLD 528 (795)
T ss_dssp EETTE
T ss_pred CCCCe
Confidence 76543
No 289
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.59 E-value=0.0019 Score=43.50 Aligned_cols=141 Identities=7% Similarity=-0.075 Sum_probs=75.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCcee------eeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ------TRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~------~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 72 (188)
|+|+|+|.+.++ .++.++-.+..+.... ..+- +-. ...++.|.|+|.+.++ .||.|.-++-.+.+..
T Consensus 46 laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 46 LFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD 120 (236)
T ss_dssp EEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC
T ss_pred EEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC
Confidence 579998876666 6688877776542211 1110 111 1478899999988777 5688877765321111
Q ss_pred c----ceeeec-cCCceeEE-eecCCCEEEEecCCCeEEEEecccCee-----eeecccCCCc-ceeEEEeeCCCCEEEE
Q 029743 73 S----DRFVGL-SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI-----IQPIAEHSEY-PIESLALSHDRKFLGS 140 (188)
Q Consensus 73 ~----~~~~~~-~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~-----~~~~~~~~~~-~v~~~~~~~~~~~l~~ 140 (188)
- ....+. .-..+..+ +.|+|.+.++. ++.++-....++.. ..+.-++.+. .-..+.|.+++...++
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v 198 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGV 198 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEE
T ss_pred ceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEE
Confidence 0 011110 12456777 58999887777 67654332221110 0111111111 3345668888877665
Q ss_pred EeCCCcEEEEeC
Q 029743 141 ISHDSMLKLWDL 152 (188)
Q Consensus 141 ~~~d~~i~iwd~ 152 (188)
. ++ ++|..
T Consensus 199 ~--~g--~~Y~~ 206 (236)
T 1tl2_A 199 Q--GG--KFYED 206 (236)
T ss_dssp E--TT--EEEEE
T ss_pred e--CC--eEEec
Confidence 5 66 44444
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.59 E-value=0.01 Score=43.03 Aligned_cols=149 Identities=10% Similarity=0.082 Sum_probs=86.1
Q ss_pred eeecccCeEEEEe------------CCCcEEEEEcCC--Ccee-eeecc-----cccceEEEEEEe--CCC-EEEEe-cC
Q 029743 2 TFAADAMKLLGTS------------GDGTLSVCNLRK--NTVQ-TRSEF-----SEEELTSVVLMK--NGR-KVVCG-SQ 57 (188)
Q Consensus 2 ~~s~~~~~l~~~~------------~d~~i~i~~~~~--~~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~ 57 (188)
++.|+|..+++++ .+|.|.++|..+ ++.. ..+.+ .......+.+.+ +++ +|+++ ..
T Consensus 56 ~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 56 EILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp EECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS
T ss_pred EEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC
Confidence 4567765544441 689999999874 2221 12222 234678888877 353 34433 33
Q ss_pred --CCeEEEEEeCCcccccc---eeeeccCCceeEE-eecCCCEEEEec-----------------CCCeEEEEecccCee
Q 029743 58 --SGTVLLYSWGYFKDCSD---RFVGLSPNSVDAL-LKLDEDRVITGS-----------------ENGLISLVGILPNRI 114 (188)
Q Consensus 58 --d~~i~~~d~~~~~~~~~---~~~~~~~~~v~~~-~~~~~~~l~~~~-----------------~d~~v~~~d~~~~~~ 114 (188)
+.+|.+|+++..+.... .+.+..-.....+ +.++|.+.++.. ..|.|+-++. ++.
T Consensus 136 ~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~ 213 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV 213 (355)
T ss_dssp TTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC
T ss_pred CCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE
Confidence 56888998865333222 2222012235566 688888777654 1244555554 333
Q ss_pred eeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCCC
Q 029743 115 IQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLDD 154 (188)
Q Consensus 115 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~ 154 (188)
.....+- . ..+.++|+||++.|+.+. ..+.|..|++..
T Consensus 214 ~~~~~~l-~-~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 214 RVVAEGF-D-FANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEEE-S-SEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEeecCC-c-ccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 2222222 2 468999999998877655 568999999863
No 291
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.56 E-value=0.0029 Score=45.83 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=53.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCcee--eeec---ccccceEEEEEEeC---CCEEEEecC-C-----CeEEEEEe
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ--TRSE---FSEEELTSVVLMKN---GRKVVCGSQ-S-----GTVLLYSW 66 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i~~~d~ 66 (188)
|+|.|+|++++ +...+.|++++ .++.. ..+. ........++++|+ +..|+++.. . ..|..++.
T Consensus 36 ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 36 LAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 47899998554 46669999988 44321 1111 12346889999998 555554433 2 56778887
Q ss_pred CCcc----c-ccceee--eccCCceeEE-eecCCCEEEEe
Q 029743 67 GYFK----D-CSDRFV--GLSPNSVDAL-LKLDEDRVITG 98 (188)
Q Consensus 67 ~~~~----~-~~~~~~--~~~~~~v~~~-~~~~~~~l~~~ 98 (188)
.... + .+..+. .........+ +.|+|.+.++.
T Consensus 113 ~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 113 LGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp CSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 5310 1 111111 0011123456 78999766654
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.55 E-value=0.022 Score=45.86 Aligned_cols=151 Identities=11% Similarity=-0.103 Sum_probs=86.0
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC--CCeEEEEEeCCcccccceee
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~ 77 (188)
|++.+.++.|+.+. ..+.|.+.++........+...-.....|++.|....|+.+.. .+.|...+++ +.....+.
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~~~~lv 553 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLV 553 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCCEEEEE
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC--CCceEEEE
Confidence 35566565555543 4577888887654433333333456789999997666665543 2678888775 34444443
Q ss_pred eccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeecccCC-CcceeEEEeeCCCCEEEEE-eCCCcEEEEeCC
Q 029743 78 GLSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAEHS-EYPIESLALSHDRKFLGSI-SHDSMLKLWDLD 153 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~ 153 (188)
...-.....| +.+.+..|+.+ ...+.|..+++........+.... -.....|++. +..|+.+ ...+.|...+..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCC
Confidence 2033456777 67666655554 456789999986443333322211 0134566664 3345444 455777777755
Q ss_pred Cc
Q 029743 154 DI 155 (188)
Q Consensus 154 ~~ 155 (188)
++
T Consensus 632 tG 633 (791)
T 3m0c_C 632 TG 633 (791)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.52 E-value=0.011 Score=46.13 Aligned_cols=152 Identities=9% Similarity=-0.065 Sum_probs=85.5
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC--CCeEEEEEeCCcccccceee
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~ 77 (188)
|++.+.++.|+.+. ..+.|.+.++........+...-.....|++.|.+..|+.+.. .+.|...+++ +.....+.
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d--G~~~~~l~ 166 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIII 166 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEE
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC--CCceEEEE
Confidence 35666555555554 4578888887754432233233445789999997666655543 3566666664 44444443
Q ss_pred eccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 78 GLSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
...-.....+ ++++++.|+.+ ...+.|..+++........+.+... ...+|++..+ ..+.+-...+.|...|..++
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~-~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLP-HPFALTLFED-ILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSC
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCC-CceEEEEeCC-EEEEecCCCCEEEEEECCCC
Confidence 2033446677 68766655544 4667899999865443322221212 3457777655 33334445678888887665
Q ss_pred c
Q 029743 156 L 156 (188)
Q Consensus 156 ~ 156 (188)
.
T Consensus 245 ~ 245 (619)
T 3s94_A 245 E 245 (619)
T ss_dssp C
T ss_pred c
Confidence 4
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.51 E-value=0.012 Score=42.15 Aligned_cols=148 Identities=6% Similarity=-0.005 Sum_probs=88.2
Q ss_pred ecccCeEEEEeC-------------CCcEEEEEcC---CCceeeeec--cc-----------ccceEEEEEEeCCCEEEE
Q 029743 4 AADAMKLLGTSG-------------DGTLSVCNLR---KNTVQTRSE--FS-----------EEELTSVVLMKNGRKVVC 54 (188)
Q Consensus 4 s~~~~~l~~~~~-------------d~~i~i~~~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~ 54 (188)
.|+++++++... ++.|..+|+. +++.+.... .. ......++..++|+..++
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 577777775442 5779999998 676654432 11 124789999999999998
Q ss_pred ecCC-CeEEEEEeCCcccccceeeec-----cCCceeEE-eecCCCEEEEecCCCeEEEEecccCee--eeecc--cC--
Q 029743 55 GSQS-GTVLLYSWGYFKDCSDRFVGL-----SPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRI--IQPIA--EH-- 121 (188)
Q Consensus 55 ~~~d-~~i~~~d~~~~~~~~~~~~~~-----~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~--~~~~~--~~-- 121 (188)
++.. +.|...+.+ +..+..+.-. .......+ ++|+|..|++....+.|..+|+..... +. +. +.
T Consensus 154 ~s~~~~~I~rV~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~ 230 (334)
T 2p9w_A 154 FALGMPAIARVSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFG 230 (334)
T ss_dssp EEESSCEEEEECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCC
T ss_pred CCCCCCeEEEEeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcc
Confidence 8887 776555543 3333332210 11124566 799999888887799999999874322 11 11 11
Q ss_pred CCcceeEE-EeeCCCCEE-EEEeCCCcEEEEeCCC
Q 029743 122 SEYPIESL-ALSHDRKFL-GSISHDSMLKLWDLDD 154 (188)
Q Consensus 122 ~~~~v~~~-~~~~~~~~l-~~~~~d~~i~iwd~~~ 154 (188)
.......| ....+|+.| ++....+.+.+.+...
T Consensus 231 ~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 231 TLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred cccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 00012333 333477774 4444556555555443
No 295
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.49 E-value=0.012 Score=41.63 Aligned_cols=139 Identities=6% Similarity=-0.059 Sum_probs=83.3
Q ss_pred eecccCeEEEEeCC--------------CcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEec--CCCeEEEEEe
Q 029743 3 FAADAMKLLGTSGD--------------GTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGS--QSGTVLLYSW 66 (188)
Q Consensus 3 ~s~~~~~l~~~~~d--------------~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~ 66 (188)
+++++++|+.+... ..|+..++..++....... . +..|+++++.|+-.. .++.-.||.+
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 57888888877543 3577777766543322221 1 236788898888765 3445555555
Q ss_pred CCcccccceeeeccCCceeEE-eecCCCEEEEecC-CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCC
Q 029743 67 GYFKDCSDRFVGLSPNSVDAL-LKLDEDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHD 144 (188)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 144 (188)
...+...+.+.. +.. . ++++++.|+-.+. ...|.+.++..+.....+.+ ... ..++|++.+|+-....
T Consensus 135 ~~dGs~~~~lt~-~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 135 RIDGEEKKKIKN-HYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC----NCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp ETTSCCCEEEES-SCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS----CEE-EEEEEETTEEEEEEGG
T ss_pred ECCCCCeEEEeC-CCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC----Ccc-ceeeecCCEEEEEEcC
Confidence 444555555654 432 3 5888888775554 67788888876654433332 222 3466888888766533
Q ss_pred --CcEEEEeCCCcc
Q 029743 145 --SMLKLWDLDDIL 156 (188)
Q Consensus 145 --~~i~iwd~~~~~ 156 (188)
..|..-++....
T Consensus 205 ~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 205 RDNAIVHVNINNPN 218 (302)
T ss_dssp GTTEEEEECSSSCC
T ss_pred CCcEEEEEECCCCC
Confidence 356666665544
No 296
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.45 E-value=0.012 Score=42.56 Aligned_cols=138 Identities=12% Similarity=0.116 Sum_probs=74.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCcee--eeec----ccccceEEEEEEeC---CCEEEEe---cCCCeEEEEEeCC
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ--TRSE----FSEEELTSVVLMKN---GRKVVCG---SQSGTVLLYSWGY 68 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~----~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~~~d~~~ 68 (188)
|+|.|+|+++++--..|.|++++...+... ..+. ........|+++|+ +..|+.. ..++.|.-|.+..
T Consensus 37 ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 37 LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 578999987766544899999986655432 1121 22456899999985 3444432 2345566666543
Q ss_pred cc-------cccceeeec---cCCceeEE-eecCCCEEEEecC-------------CCeEEEEecccC---------eee
Q 029743 69 FK-------DCSDRFVGL---SPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPN---------RII 115 (188)
Q Consensus 69 ~~-------~~~~~~~~~---~~~~v~~~-~~~~~~~l~~~~~-------------d~~v~~~d~~~~---------~~~ 115 (188)
.. .....+... .......+ |.|+|.+.++.+. .|.|.-.+.... ..+
T Consensus 117 ~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i 196 (347)
T 3das_A 117 KKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPV 196 (347)
T ss_dssp TSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCE
T ss_pred CCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeE
Confidence 10 111111110 11223446 7899987666432 345555554422 011
Q ss_pred eecccCCCcceeEEEeeCCCCEEEEE
Q 029743 116 QPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 116 ~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
.. .++. ....++|+|++.+.++-
T Consensus 197 ~a-~G~R--Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 197 YS-YGHR--NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp EE-BCCS--BCCEEEECTTCCEEEEE
T ss_pred Ee-eCCC--CcceEEECCCCCEEEEe
Confidence 11 2342 46789999987665433
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.45 E-value=0.0081 Score=43.53 Aligned_cols=135 Identities=14% Similarity=0.065 Sum_probs=72.3
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCc-eeeeec---ccccceEEEEEEeC---CCEEEEecC----C----CeEEEEE
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNT-VQTRSE---FSEEELTSVVLMKN---GRKVVCGSQ----S----GTVLLYS 65 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----~~i~~~d 65 (188)
|+|.|+|++++ +..++.|++++ .+++ .+..+. ........|+++|+ +..|+++.. + ..|..|+
T Consensus 34 ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 34 IAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 57889997544 46669999887 4454 222211 12346889999997 455554432 2 5677777
Q ss_pred eCCcc------cc-cceeeeccCCceeEE-eecCCCEEEEecC-------------CCeEEEEecccC---------eee
Q 029743 66 WGYFK------DC-SDRFVGLSPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPN---------RII 115 (188)
Q Consensus 66 ~~~~~------~~-~~~~~~~~~~~v~~~-~~~~~~~l~~~~~-------------d~~v~~~d~~~~---------~~~ 115 (188)
..... +. +..+..........+ |.|+|.+.++.+. .|.|.-++.... ..+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i 191 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPI 191 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCE
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcE
Confidence 65321 11 111111011123456 7899987666432 245665655421 011
Q ss_pred eecccCCCcceeEEEeeC-CCCEEEE
Q 029743 116 QPIAEHSEYPIESLALSH-DRKFLGS 140 (188)
Q Consensus 116 ~~~~~~~~~~v~~~~~~~-~~~~l~~ 140 (188)
.. .++. ....++|+| ++..+++
T Consensus 192 ~a-~G~r--np~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 192 WS-YGHR--NPQGIDWHRASGVMVAT 214 (354)
T ss_dssp EE-ECCS--CCCEEEECTTTCCEEEE
T ss_pred EE-EccC--CcceEEEeCCCCCEEEE
Confidence 11 2332 357899999 5655443
No 298
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.44 E-value=0.031 Score=44.88 Aligned_cols=141 Identities=10% Similarity=0.038 Sum_probs=85.6
Q ss_pred cccCeEEEEeCCCcEEEEEcCCCceeeeec----ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee--
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-- 78 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-- 78 (188)
+++++|..|+.++-|.+++..+++...... .....|.++...++++..+.. .+ -+.+|+.... ....+..
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~--~~~~~~~~~ 490 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQR--SFTTIEKEK 490 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTT--EEEECCBCT
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCC--eEEEccccc
Confidence 455536667776779999988775433221 124578899888877755544 34 4888887542 2222211
Q ss_pred ----ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecc------cCCCcceeEEEeeCCCCEEEEEeCCCcE
Q 029743 79 ----LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA------EHSEYPIESLALSHDRKFLGSISHDSML 147 (188)
Q Consensus 79 ----~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i 147 (188)
.....+.++ ..++|++.+... +-|..|+..++.. .+. +.....|.++...++|...++.. . .|
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl 564 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GF 564 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CE
T ss_pred cccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-Cc
Confidence 012457777 467777665544 4588899877654 221 11112688898888887665443 3 57
Q ss_pred EEEeCCCc
Q 029743 148 KLWDLDDI 155 (188)
Q Consensus 148 ~iwd~~~~ 155 (188)
..||..+.
T Consensus 565 ~~~d~~~~ 572 (795)
T 4a2l_A 565 YCFNEKDK 572 (795)
T ss_dssp EEEETTTT
T ss_pred eeECCCCC
Confidence 88887654
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.43 E-value=0.002 Score=51.08 Aligned_cols=151 Identities=13% Similarity=-0.061 Sum_probs=83.3
Q ss_pred eeecccCeEEEE-eCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC--CCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGT-SGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.++.|+.+ ...+.|.++++........+.........+++.|.+..|+.+.. .+.|..++++ +.....+..
T Consensus 459 avD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~d--G~~~~~l~~ 536 (699)
T 1n7d_A 459 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVDIYSLVT 536 (699)
T ss_dssp ECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSS--SCCCCEESC
T ss_pred EEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCC--CCCeeEEEe
Confidence 444444444443 34577888887655433333322345678899986665555443 2677777765 333333321
Q ss_pred ccCCceeEE-eecCCCEE-EEecCCCeEEEEecccCeeeeeccc--CCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 79 LSPNSVDAL-LKLDEDRV-ITGSENGLISLVGILPNRIIQPIAE--HSEYPIESLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l-~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
..-.....| ++|++..| ++-...+.|..+++........+.. ... ....|++..+ ..+++....+.|..++..+
T Consensus 537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~-~P~glavd~~-~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA-HPFSLAVFED-KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCS-SCCCCEEETT-EEEEECSTTTCEEEEETTT
T ss_pred CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCC-CceEeEEECC-EEEEEeCCCCeEEEEEccC
Confidence 022334556 78765544 4555678899999864332222221 112 3456666544 3444555668899998765
Q ss_pred cc
Q 029743 155 IL 156 (188)
Q Consensus 155 ~~ 156 (188)
+.
T Consensus 615 G~ 616 (699)
T 1n7d_A 615 GS 616 (699)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.39 E-value=0.016 Score=40.58 Aligned_cols=143 Identities=10% Similarity=0.029 Sum_probs=74.1
Q ss_pred ccCeEEEEeCC-----CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC-----CeEEEEEeCCccccc
Q 029743 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFKDCS 73 (188)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~ 73 (188)
+++.++.|+.+ ..+.+||+.+.+-.. .++........+ .-+++.++.|+.+ ..+.+||+.+. ..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W 187 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLV--VASGVIYCLGGYDGLNILNSVEKYDPHTG--HW 187 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTTT--EE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEE--EECCEEEEECCCCCCcccceEEEEeCCCC--cE
Confidence 45666666543 357888887754322 222111111222 2367777777654 45888887642 22
Q ss_pred ceeeeccCC--ceeEEeecCCCEEEEecCC-----CeEEEEecccCeeee--ecccCCCcceeEEEeeCCCCEEEEEeCC
Q 029743 74 DRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFLGSISHD 144 (188)
Q Consensus 74 ~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d 144 (188)
..+.. ... .-.++...++++++.|+.+ ..+.+||+.+.+-.. .+..... .. .++. -+++.++.|+.+
T Consensus 188 ~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-~~-~~~~-~~~~i~v~GG~~ 263 (301)
T 2vpj_A 188 TNVTP-MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC-YV-GATV-LRGRLYAIAGYD 263 (301)
T ss_dssp EEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB-SC-EEEE-ETTEEEEECCBC
T ss_pred EeCCC-CCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc-ce-eEEE-ECCEEEEEcCcC
Confidence 22211 111 1122233466777777653 468999998765322 2222211 11 2222 266777777755
Q ss_pred -----CcEEEEeCCCcc
Q 029743 145 -----SMLKLWDLDDIL 156 (188)
Q Consensus 145 -----~~i~iwd~~~~~ 156 (188)
..+.+||+++..
T Consensus 264 ~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 264 GNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSSBEEEEEEEETTTTE
T ss_pred CCcccccEEEEcCCCCe
Confidence 357888887643
No 301
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.39 E-value=0.006 Score=47.92 Aligned_cols=115 Identities=11% Similarity=-0.003 Sum_probs=69.1
Q ss_pred EEEEEe-CCCEEEEecCCC-----------eEEEEEeCCcc-cccceeeeccCCceeEE-eecCCCEEEEec-CCCeEEE
Q 029743 42 SVVLMK-NGRKVVCGSQSG-----------TVLLYSWGYFK-DCSDRFVGLSPNSVDAL-LKLDEDRVITGS-ENGLISL 106 (188)
Q Consensus 42 ~~~~~~-~~~~l~~~~~d~-----------~i~~~d~~~~~-~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~-~d~~v~~ 106 (188)
.+++.+ +++.++.|+.+. .+.+||..+.. ..+..+...+.....++ +.+++++++.|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 788888876542 57888886532 11111211011122233 568899999988 4568999
Q ss_pred EecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CC-----CcEEEEeCCCcc
Q 029743 107 VGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HD-----SMLKLWDLDDIL 156 (188)
Q Consensus 107 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~ 156 (188)
||..+.+-...-..+....-.+++..++++.++.|+ .+ ..+.+||..+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 999876543221112111123456667899888888 34 569999987643
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.38 E-value=0.031 Score=43.72 Aligned_cols=152 Identities=12% Similarity=0.016 Sum_probs=88.6
Q ss_pred CeeecccCeEEEEeC-CCcEEEEEcCCCce-eeeecccccceEEEEEEeCCCEE-EEecCCCeEEEEEeCCcccccceee
Q 029743 1 MTFAADAMKLLGTSG-DGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFV 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~~-d~~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~ 77 (188)
|+|++.++.|+.+.. .+.|..+++..... ...+...-.....+++.+.++.| ++-...+.|.+.+++. .....+.
T Consensus 45 ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG--~~~~~l~ 122 (619)
T 3s94_A 45 VDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG--SLRKVLF 122 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEE
T ss_pred EEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC--CCEEEEE
Confidence 356776666665544 46677777665422 22233222467899999865555 4555678999999863 3333443
Q ss_pred -eccCCceeEE-eecCCCEEEEec--CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeC
Q 029743 78 -GLSPNSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDL 152 (188)
Q Consensus 78 -~~~~~~v~~~-~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~ 152 (188)
. .-.....+ +.|.+.+|+... ..+.|...++........+... ......|++++++..|+.+. ..+.|..+++
T Consensus 123 ~~-~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~-~~~P~Glald~~~~~LY~aD~~~~~I~~~~~ 200 (619)
T 3s94_A 123 WQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 200 (619)
T ss_dssp CS-SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEETTTCCEEEESS
T ss_pred eC-CCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC-CCCCcEEEEEccCCEEEEEeCCCCeEEEecC
Confidence 3 33445667 678655554443 2467777776533222222222 22578999999777666554 5678999988
Q ss_pred CCcc
Q 029743 153 DDIL 156 (188)
Q Consensus 153 ~~~~ 156 (188)
....
T Consensus 201 dG~~ 204 (619)
T 3s94_A 201 DGTN 204 (619)
T ss_dssp SCCE
T ss_pred CCCc
Confidence 7643
No 303
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.32 E-value=0.0041 Score=46.06 Aligned_cols=105 Identities=10% Similarity=-0.001 Sum_probs=69.1
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCce------------eeeec-c-----cccceEEEEEEeC---CCEEEEecCCCe
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTV------------QTRSE-F-----SEEELTSVVLMKN---GRKVVCGSQSGT 60 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~------------~~~~~-~-----~~~~v~~~~~~~~---~~~l~~~~~d~~ 60 (188)
..||+|++||..+. ..|.|..+..+.. .+.+. + ...+|..+.|+|- +..|++-..|+.
T Consensus 72 vlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~ 150 (452)
T 3pbp_A 72 ISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT 150 (452)
T ss_dssp EECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC
T ss_pred EECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE
Confidence 57899999999866 6899988873310 11121 1 2467999999994 468999999999
Q ss_pred EEEEEeCCcc-cccceeeec--------cCCceeEE-eecCCCEEEE--ecCCCeEEEEe
Q 029743 61 VLLYSWGYFK-DCSDRFVGL--------SPNSVDAL-LKLDEDRVIT--GSENGLISLVG 108 (188)
Q Consensus 61 i~~~d~~~~~-~~~~~~~~~--------~~~~v~~~-~~~~~~~l~~--~~~d~~v~~~d 108 (188)
|++||+.... .+. .+... ....+.++ |..++-.|+. .+..|.|+-..
T Consensus 151 Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 151 ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 9999997421 122 22110 11446666 7677666666 44788887554
No 304
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.29 E-value=0.02 Score=42.98 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=53.7
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCcee--eeecc------cccceEEEEEEeC---CCEEEEecC------------
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQ--TRSEF------SEEELTSVVLMKN---GRKVVCGSQ------------ 57 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~~~------------ 57 (188)
|+|.|+|+++++--..+.|++++..++... ..+.. ....+..|+|+|+ +..|+.+..
T Consensus 32 ~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~ 111 (454)
T 1cru_A 32 LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELP 111 (454)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSC
T ss_pred EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccc
Confidence 578899987776544357888876555432 22221 2356779999995 555544332
Q ss_pred -CCeEEEEEeCCcc----cccceee---eccCCceeEE-eecCCCEEEEec
Q 029743 58 -SGTVLLYSWGYFK----DCSDRFV---GLSPNSVDAL-LKLDEDRVITGS 99 (188)
Q Consensus 58 -d~~i~~~d~~~~~----~~~~~~~---~~~~~~v~~~-~~~~~~~l~~~~ 99 (188)
...|..+++.... .....+. .........+ |.|+|.+.++.+
T Consensus 112 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 112 NQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2356566653211 1111121 1012235666 799998766543
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.28 E-value=0.042 Score=43.07 Aligned_cols=150 Identities=11% Similarity=0.078 Sum_probs=91.5
Q ss_pred CeeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEE-EEecCCCeEEEEEeCCcccccceee-
Q 029743 1 MTFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKV-VCGSQSGTVLLYSWGYFKDCSDRFV- 77 (188)
Q Consensus 1 l~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~- 77 (188)
|+|++.++.|+.+. .++.|+.+++........+.........+++.+.+..| ++-...+.|.+.+++. .....+.
T Consensus 42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG--~~~~~l~~ 119 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG--QHRQVLVW 119 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS--TTCEEEEC
T ss_pred EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC--CcEEEEEe
Confidence 35677656665544 45778878776544333333222457789998765555 4545567899999863 3333333
Q ss_pred eccCCceeEE-eecCCCEEEEec--CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe-CCCcEEEEeCC
Q 029743 78 GLSPNSVDAL-LKLDEDRVITGS--ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS-HDSMLKLWDLD 153 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 153 (188)
. .-.....+ +.|...+|+... ..+.|...++........+... . ....|+++++++.|+.+. ..+.|..+++.
T Consensus 120 ~-~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~-~-~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 120 K-DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV-G-RANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp S-SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC-S-SEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C-CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC-C-CcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 3 33456677 688555555443 3567888887644332223322 3 578999999877776554 55788888886
Q ss_pred Cc
Q 029743 154 DI 155 (188)
Q Consensus 154 ~~ 155 (188)
..
T Consensus 197 G~ 198 (628)
T 4a0p_A 197 GL 198 (628)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.25 E-value=0.045 Score=42.88 Aligned_cols=149 Identities=10% Similarity=-0.030 Sum_probs=87.6
Q ss_pred eeecccCeEEEEe-CCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecC--CCeEEEEEeCCcccccceeee
Q 029743 2 TFAADAMKLLGTS-GDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQ--SGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 2 ~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~ 78 (188)
++.+.++.|+.+. ..+.|.+.++........+...-.....+++.|....|+.+.. .+.|...+++ +.....+..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~l~~ 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTTLVP 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEEEEC
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEEEEC
Confidence 4555445554443 3567888887654332222233345789999986555555542 4577777765 344444444
Q ss_pred ccCCceeEE-eecCCCEEEEe-cCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 79 LSPNSVDAL-LKLDEDRVITG-SENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 79 ~~~~~v~~~-~~~~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
.-.....+ ++++++.|+.+ ...+.|..+++..... ..+..... ...++++.. +..+.+-...+.|...|..++.
T Consensus 164 -~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~-~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 164 -NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLP-HPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp -SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCS-CEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred -CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCC-CceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 44556677 68876666555 4677899999865433 23332223 456788865 3344444457888888866554
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.23 E-value=0.026 Score=39.57 Aligned_cols=144 Identities=10% Similarity=0.024 Sum_probs=73.3
Q ss_pred ccCeEEEEeCCC-----cEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC-------CeEEEEEeCCccc
Q 029743 6 DAMKLLGTSGDG-----TLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-------GTVLLYSWGYFKD 71 (188)
Q Consensus 6 ~~~~l~~~~~d~-----~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~ 71 (188)
+++.++.|+.++ .+.+||+.+.+-.. .++........+. -+++.++.|+.+ ..+.+||+.+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-- 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTN-- 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTT--
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCC--
Confidence 456666776543 56788887654322 2221111112222 266677776542 35888887642
Q ss_pred ccceeeec-cCCceeEEeecCCCEEEEecCC-----CeEEEEecccCeee--eecccCCCcceeEEEeeCCCCEEEEEeC
Q 029743 72 CSDRFVGL-SPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRII--QPIAEHSEYPIESLALSHDRKFLGSISH 143 (188)
Q Consensus 72 ~~~~~~~~-~~~~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 143 (188)
....+... ....-.++...++++++.|+.+ ..+.+||+.+.+-. ..+..... . ..++. .+++.++.|+.
T Consensus 184 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-~-~~~~~-~~~~i~v~GG~ 260 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR-N-AGVCA-VNGLLYVVGGD 260 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB-S-CEEEE-ETTEEEEECCB
T ss_pred cEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc-c-CeEEE-ECCEEEEECCc
Confidence 11211110 1111122233467777777654 46889998876532 22221111 1 12222 26677777775
Q ss_pred C-----CcEEEEeCCCcc
Q 029743 144 D-----SMLKLWDLDDIL 156 (188)
Q Consensus 144 d-----~~i~iwd~~~~~ 156 (188)
+ ..+.+||+.+..
T Consensus 261 ~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccccEEEEcCCCCe
Confidence 4 348899987654
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.22 E-value=0.025 Score=39.73 Aligned_cols=144 Identities=9% Similarity=0.090 Sum_probs=74.4
Q ss_pred ccCeEEEEeCC----CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC------CeEEEEEeCCccccc
Q 029743 6 DAMKLLGTSGD----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS------GTVLLYSWGYFKDCS 73 (188)
Q Consensus 6 ~~~~l~~~~~d----~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~ 73 (188)
+++.++.|+.+ ..+.+||+.+++-.. .++........+ .-+++.++.|+.+ ..+.+||..+. ..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTE--SW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTT--EE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCC--ce
Confidence 45666777654 567888988764322 222111112222 2367777777765 45888887642 12
Q ss_pred ceeeec-cCCceeEEeecCCCEEEEecC---------CCeEEEEecccCeee--eecccCCCcceeEEEeeCCCCEEEEE
Q 029743 74 DRFVGL-SPNSVDALLKLDEDRVITGSE---------NGLISLVGILPNRII--QPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 74 ~~~~~~-~~~~v~~~~~~~~~~l~~~~~---------d~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
..+... ....-.++...++++++.|+. ...+.+||+.+.+-. ..+..... -.+++.. +++.++.|
T Consensus 131 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~~-~~~i~v~G 207 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK--NHGLVFV-KDKIFAVG 207 (306)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB--SCEEEEE-TTEEEEEC
T ss_pred EeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh--cceEEEE-CCEEEEEe
Confidence 222110 011111222346666666653 345889998876532 22221111 1122222 56677776
Q ss_pred eCC-----CcEEEEeCCCcc
Q 029743 142 SHD-----SMLKLWDLDDIL 156 (188)
Q Consensus 142 ~~d-----~~i~iwd~~~~~ 156 (188)
+.+ ..+.+||+.+..
T Consensus 208 G~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCCceEEEeeCCCCc
Confidence 643 468899987753
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.11 E-value=0.02 Score=41.49 Aligned_cols=136 Identities=13% Similarity=0.034 Sum_probs=70.9
Q ss_pred CeeecccCeEEEEeCCCcEEEEEcCCCceeee---e----cccccceEEEEEEeC---CCEEEEec-C-------CCeEE
Q 029743 1 MTFAADAMKLLGTSGDGTLSVCNLRKNTVQTR---S----EFSEEELTSVVLMKN---GRKVVCGS-Q-------SGTVL 62 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~l~~~~-~-------d~~i~ 62 (188)
|+|.|+|+.|+++...+.|++++.. +..... + .........++++|+ +..|+.+. . ...|.
T Consensus 23 i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~ 101 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVG 101 (353)
T ss_dssp EEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEE
T ss_pred EEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEE
Confidence 5789999845555677999999853 332111 1 112345689999995 44444432 2 23566
Q ss_pred EEEeCCccc---ccce-eeec-----cCCceeEE-eecCCCEEEEecC-------------CCeEEEEecccCe------
Q 029743 63 LYSWGYFKD---CSDR-FVGL-----SPNSVDAL-LKLDEDRVITGSE-------------NGLISLVGILPNR------ 113 (188)
Q Consensus 63 ~~d~~~~~~---~~~~-~~~~-----~~~~v~~~-~~~~~~~l~~~~~-------------d~~v~~~d~~~~~------ 113 (188)
.+++..... ..+. +... .......+ |.|+|.+.++.+. .|.|.-++....-
T Consensus 102 r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf 181 (353)
T 2g8s_A 102 YGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPF 181 (353)
T ss_dssp EEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTT
T ss_pred EEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCC
Confidence 666643211 1111 1110 01113456 7999965555432 2466666654320
Q ss_pred ------eeeec-ccCCCcceeEEEeeC-CCCEEE
Q 029743 114 ------IIQPI-AEHSEYPIESLALSH-DRKFLG 139 (188)
Q Consensus 114 ------~~~~~-~~~~~~~v~~~~~~~-~~~~l~ 139 (188)
....+ .++ . ....++|+| ++++++
T Consensus 182 ~~~~~~~~~i~a~G~-r-np~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 182 IKESGVRAEIWSYGI-R-NPQGMAMNPWSNALWL 213 (353)
T ss_dssp TTSTTSCTTEEEECC-S-EEEEEEEETTTTEEEE
T ss_pred cCCCCCCccEEEEcC-c-CccceEEECCCCCEEE
Confidence 11111 233 2 478899999 555444
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.10 E-value=0.036 Score=38.90 Aligned_cols=143 Identities=11% Similarity=0.090 Sum_probs=74.3
Q ss_pred ccCeEEEEeCC------CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecC---------CCeEEEEEeCC
Q 029743 6 DAMKLLGTSGD------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQ---------SGTVLLYSWGY 68 (188)
Q Consensus 6 ~~~~l~~~~~d------~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~ 68 (188)
+++.++.|+.+ ..+.+||+.+.+-.. .++........+ .-+++.++.|+. -..+.+||+.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMV--EANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEE--EECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 55666777654 468889988764322 222111111222 236667777654 34588888864
Q ss_pred cccccceeeeccCC--ceeEEeecCCCEEEEecCC-----CeEEEEecccCee--eeecccCCCcceeEEEeeCCCCEEE
Q 029743 69 FKDCSDRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRI--IQPIAEHSEYPIESLALSHDRKFLG 139 (188)
Q Consensus 69 ~~~~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~ 139 (188)
. ....+.. ... .-.++..-++++++.|+.+ ..+.+||+.+.+- +..+..... ....+.+ +++.++
T Consensus 179 ~--~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~--~~~i~v 252 (306)
T 3ii7_A 179 E--TWTELCP-MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGV-TVKCAAV--GSIVYV 252 (306)
T ss_dssp T--EEEEECC-CSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBS-CCEEEEE--TTEEEE
T ss_pred C--eEEECCC-ccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcc-ceeEEEE--CCEEEE
Confidence 2 2222221 111 1112223366677777643 4588999887653 222222111 1222222 667777
Q ss_pred EEeCC-----CcEEEEeCCCcc
Q 029743 140 SISHD-----SMLKLWDLDDIL 156 (188)
Q Consensus 140 ~~~~d-----~~i~iwd~~~~~ 156 (188)
.|+.+ ..+.+||+.+..
T Consensus 253 ~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 253 LAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EECBCSSSBCCEEEEEETTTTE
T ss_pred EeCcCCCeeeeeEEEEcCCCCe
Confidence 77743 568889987753
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.09 E-value=0.04 Score=39.30 Aligned_cols=144 Identities=9% Similarity=0.032 Sum_probs=76.0
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCCCceeeee-cccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee--
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRKNTVQTRS-EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-- 78 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-- 78 (188)
++.|++++++.+. .+.++.-.-..+..-..+ ......+..+.+.++++.++ ++.+|.+++.+.+ .+.....+..
T Consensus 169 ~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D-~G~tW~~~~~~~ 245 (327)
T 2xbg_A 169 NRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPD-NSENWGELLSPL 245 (327)
T ss_dssp EECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETT-EEEEECCCBCTT
T ss_pred EEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCC-CCCeeEeccCCc
Confidence 4567776666554 455444321112211111 23456788899988887654 4456777766422 1222222221
Q ss_pred -ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecc---cCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeC
Q 029743 79 -LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA---EHSEYPIESLALSHDRKFLGSISHDSMLKLWDL 152 (188)
Q Consensus 79 -~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 152 (188)
.....+..+ +.+++..++++. ++.| ++..+.++.-..+. .... .++.+.|.+++. ++.++.+|.|.-++-
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~-~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPS-NFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSS-CCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCC-CeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 012246667 667777666655 5656 34444444333332 1122 578888875554 556677888777664
No 312
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.06 E-value=0.082 Score=42.34 Aligned_cols=140 Identities=13% Similarity=0.031 Sum_probs=81.2
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeecc-----CC
Q 029743 10 LLGTSGDGTLSVCNLRKNTVQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-----PN 82 (188)
Q Consensus 10 l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~ 82 (188)
|-.|+.++-|..++..+++...... .....|.++...+++++.+ ++. +-+..++... +. ...+.... ..
T Consensus 420 lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~-~~-~~~~~~~~~~~~~~~ 495 (781)
T 3v9f_A 420 LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLAS-KK-VIHHYDTSNSQLLEN 495 (781)
T ss_dssp EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSS-SS-CCEEECTTTSSCSCS
T ss_pred EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCC-Ce-EEecccCcccccccc
Confidence 4445655668888877665433221 1345688888877776444 444 4688888764 22 22222101 34
Q ss_pred ceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecc---cCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCcc
Q 029743 83 SVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIA---EHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 83 ~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 156 (188)
.+.++ ..++|.+.+.....| |..++..+++.. .+. +.....|.++...++|...++. ..|.|..||..+..
T Consensus 496 ~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 496 FVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFD 570 (781)
T ss_dssp CEEEEEECTTCCEEEEESSSC-EEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCC
T ss_pred eeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCc
Confidence 57777 467776555443344 777887665433 222 1112268889888888766544 45654888876543
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.04 E-value=0.041 Score=38.48 Aligned_cols=143 Identities=8% Similarity=-0.015 Sum_probs=75.1
Q ss_pred ccCeEEEEeCC-----CcEEEEEcCCCc---e--eeeecccccceEEEEEEeCCCEEEEecCC-----CeEEEEEeCCcc
Q 029743 6 DAMKLLGTSGD-----GTLSVCNLRKNT---V--QTRSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFK 70 (188)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~~~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 70 (188)
+++.++.|+.+ ..+.+||+.+.+ - +..++........+. .+++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 45666777654 468899987765 2 222222112222222 267777777654 36888887642
Q ss_pred cccceeeeccCC--ceeEEeecCCCEEEEecCC-----CeEEEEecccCeeee--ecccCCCcceeEEEeeCCCCEEEEE
Q 029743 71 DCSDRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 71 ~~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
....+.. ... .-.++...+++.++.|+.+ ..+.+||+.+.+-.. .+..... . .+++. .+++.++.|
T Consensus 139 -~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~-~~~~~-~~~~i~v~G 213 (301)
T 2vpj_A 139 -QWSMLGD-MQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS-G-AGVAL-LNDHIYVVG 213 (301)
T ss_dssp -EEEEEEE-CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB-S-CEEEE-ETTEEEEEC
T ss_pred -eEEECCC-CCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc-c-ceEEE-ECCEEEEEe
Confidence 2222221 111 1122223467777777654 458899987765332 2222111 1 12222 256677777
Q ss_pred eCC-----CcEEEEeCCCcc
Q 029743 142 SHD-----SMLKLWDLDDIL 156 (188)
Q Consensus 142 ~~d-----~~i~iwd~~~~~ 156 (188)
+.+ ..+.+||+.+..
T Consensus 214 G~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCc
Confidence 653 468999987654
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.01 E-value=0.037 Score=39.10 Aligned_cols=144 Identities=9% Similarity=0.012 Sum_probs=72.2
Q ss_pred ccCeEEEEeCC--------CcEEEEEcCCCcee--eeecccccceEEEEEEeCCCEEEEecC-C-----CeEEEEEeCCc
Q 029743 6 DAMKLLGTSGD--------GTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQ-S-----GTVLLYSWGYF 69 (188)
Q Consensus 6 ~~~~l~~~~~d--------~~i~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~~~d~~~~ 69 (188)
+++.++.|+.+ ..+.+||+.+.+-. ..++...... ++ ..-+++.++.|+. + ..+.+||..+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~-~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TV-LSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EE-EEETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eE-EEECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 45556666532 45888898775422 2222111111 22 2246677777776 2 46888887642
Q ss_pred ccccceeeec-cCCceeEEeecCCCEEEEecCCC-----eEEEEecccCeee--eecccCCCcceeEEEeeCCCCEEEEE
Q 029743 70 KDCSDRFVGL-SPNSVDALLKLDEDRVITGSENG-----LISLVGILPNRII--QPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 70 ~~~~~~~~~~-~~~~v~~~~~~~~~~l~~~~~d~-----~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
....+... ....-.++..-++++++.|+.++ .+.+||+.+.+-. ..+..... . .+++.. +++.++.|
T Consensus 176 --~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~-~~~~~~-~~~l~v~G 250 (315)
T 4asc_A 176 --EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS-S-LSLVSL-VGTLYAIG 250 (315)
T ss_dssp --EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB-S-CEEEEE-TTEEEEEE
T ss_pred --eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc-c-eeEEEE-CCEEEEEC
Confidence 11111110 11111122233667777776543 5888998776532 22222211 1 122222 56677777
Q ss_pred eCC--------------CcEEEEeCCCcc
Q 029743 142 SHD--------------SMLKLWDLDDIL 156 (188)
Q Consensus 142 ~~d--------------~~i~iwd~~~~~ 156 (188)
+.+ ..+.+||+++..
T Consensus 251 G~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 251 GFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CccccCcCCccccccccCcEEEecCCCCh
Confidence 653 247788887653
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.95 E-value=0.052 Score=38.21 Aligned_cols=144 Identities=9% Similarity=0.002 Sum_probs=73.1
Q ss_pred ccCeEEEEeCC-----CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC-----CeEEEEEeCCccccc
Q 029743 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYFKDCS 73 (188)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~ 73 (188)
+++.++.|+.+ ..+.+||+.+.+-.. .++........+.+ +++.++.|+.+ ..+.+||+.+. ..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN--EW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT--EE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC--eE
Confidence 45566666532 467888887654322 22211112222222 66777777654 45888887642 11
Q ss_pred ceeeec-cCCceeEEeecCCCEEEEecCC-----CeEEEEecccCeeee--ecccCCCcceeEEEeeCCCCEEEEEeCC-
Q 029743 74 DRFVGL-SPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRIIQ--PIAEHSEYPIESLALSHDRKFLGSISHD- 144 (188)
Q Consensus 74 ~~~~~~-~~~~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 144 (188)
..+... ....-.++..-++++++.|+.+ ..+.+||+.+.+-.. .+..... -.+++.. +++.++.|+.+
T Consensus 197 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~--~~~~~~~-~~~i~v~GG~~~ 273 (308)
T 1zgk_A 197 RMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS--ALGITVH-QGRIYVLGGYDG 273 (308)
T ss_dssp EECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB--SCEEEEE-TTEEEEECCBCS
T ss_pred eeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc--ceEEEEE-CCEEEEEcCcCC
Confidence 111110 1111112223366777777654 568999988765332 2222111 1122222 56777777643
Q ss_pred ----CcEEEEeCCCcc
Q 029743 145 ----SMLKLWDLDDIL 156 (188)
Q Consensus 145 ----~~i~iwd~~~~~ 156 (188)
..+.+||+.+..
T Consensus 274 ~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 274 HTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCBCCEEEEEETTTTE
T ss_pred CcccceEEEEcCCCCE
Confidence 457888887643
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.84 E-value=0.066 Score=37.68 Aligned_cols=144 Identities=10% Similarity=0.016 Sum_probs=72.9
Q ss_pred ccCeEEEEeC----C-----CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC-----CeEEEEEeCCc
Q 029743 6 DAMKLLGTSG----D-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-----GTVLLYSWGYF 69 (188)
Q Consensus 6 ~~~~l~~~~~----d-----~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~ 69 (188)
+++.++.|+. + ..+.+||+.+.+-.. .++........+. -+++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4555666654 2 467888887764322 2221112222222 267777777643 35788887642
Q ss_pred c-cccceeeeccCCceeEEeecCCCEEEEecCC-----CeEEEEecccCeee--eecccCCCcceeEEEeeCCCCEEEEE
Q 029743 70 K-DCSDRFVGLSPNSVDALLKLDEDRVITGSEN-----GLISLVGILPNRII--QPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 70 ~-~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
. ..+..+.. .... .++..-++++++.|+.+ ..+.+||+.+.+-. ..+..... . .+++.. +++.++.|
T Consensus 148 ~W~~~~~~p~-~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~-~~~~~~-~~~iyv~G 222 (308)
T 1zgk_A 148 EWHLVAPMLT-RRIG-VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS-G-AGVCVL-HNCIYAAG 222 (308)
T ss_dssp EEEECCCCSS-CCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB-S-CEEEEE-TTEEEEEC
T ss_pred eEeECCCCCc-cccc-eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc-c-ceEEEE-CCEEEEEe
Confidence 1 11111111 1111 12222366777777643 45889998766532 22222111 1 122222 66677777
Q ss_pred eCC-----CcEEEEeCCCcc
Q 029743 142 SHD-----SMLKLWDLDDIL 156 (188)
Q Consensus 142 ~~d-----~~i~iwd~~~~~ 156 (188)
+.+ ..+.+||+.+..
T Consensus 223 G~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCc
Confidence 654 568999987654
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.83 E-value=0.065 Score=37.49 Aligned_cols=143 Identities=11% Similarity=0.032 Sum_probs=72.9
Q ss_pred ccCeEEEEeCC-----CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCCC-----eEEEEEeCCccccc
Q 029743 6 DAMKLLGTSGD-----GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQSG-----TVLLYSWGYFKDCS 73 (188)
Q Consensus 6 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~ 73 (188)
+++.++.|+.+ ..+.+||..+.+-.. .++........+. -+++.++.|+.++ .+.+||+.+. ..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSN--EW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTT--EE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCC--eE
Confidence 45566666643 357888887754322 2221111222222 2677777777553 5777777542 22
Q ss_pred ceeeeccCC--ceeEEeecCCCEEEEecC-------CCeEEEEecccCeee--eecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 74 DRFVGLSPN--SVDALLKLDEDRVITGSE-------NGLISLVGILPNRII--QPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 74 ~~~~~~~~~--~v~~~~~~~~~~l~~~~~-------d~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
..+.. ... .-.++...+++.++.|+. ...+.+||+.+.+-. ..+..... . .+++.. +++.++.|+
T Consensus 137 ~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~-~~~~~~-~~~iyv~GG 212 (302)
T 2xn4_A 137 FHVAP-MNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRS-G-AGVGVL-NNLLYAVGG 212 (302)
T ss_dssp EEECC-CSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCB-S-CEEEEE-TTEEEEECC
T ss_pred eecCC-CCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccc-c-ccEEEE-CCEEEEECC
Confidence 22211 111 111222346667777654 245889998876532 22222211 1 122222 567777776
Q ss_pred CC-----CcEEEEeCCCcc
Q 029743 143 HD-----SMLKLWDLDDIL 156 (188)
Q Consensus 143 ~d-----~~i~iwd~~~~~ 156 (188)
.+ ..+.+||+.+..
T Consensus 213 ~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 213 HDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp BSSSSBCCCEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCC
Confidence 54 468899987643
No 318
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.78 E-value=0.066 Score=37.84 Aligned_cols=143 Identities=11% Similarity=0.033 Sum_probs=70.5
Q ss_pred ccCeEEEEeCC-------CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecC------CCeEEEEEeCCcc
Q 029743 6 DAMKLLGTSGD-------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFK 70 (188)
Q Consensus 6 ~~~~l~~~~~d-------~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~ 70 (188)
+++.++.|+.+ ..+.+||+.+.+-.. .++...... +++ ..+++.++.|+. -..+.+||+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~- 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVI-SHNGMIYCLGGKTDDKKCTNRVFIYNPKKG- 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEE-EETTEEEEECCEESSSCBCCCEEEEETTTT-
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEE-EECCEEEEEcCCCCCCCccceEEEEcCCCC-
Confidence 45566666643 347788887654322 122111111 222 246777777764 235888888642
Q ss_pred cccceeeeccCC--ceeEEeecCCCEEEEecCC-----CeEEEEecccCeee--eecccCCCcceeEEEeeCCCCEEEEE
Q 029743 71 DCSDRFVGLSPN--SVDALLKLDEDRVITGSEN-----GLISLVGILPNRII--QPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 71 ~~~~~~~~~~~~--~v~~~~~~~~~~l~~~~~d-----~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
....+.. ... .-.++..-+++.++.|+.+ ..+.+||+.+.+-. ..+..... -.+++. .+++.++.|
T Consensus 186 -~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~-~~~~i~v~G 260 (318)
T 2woz_A 186 -DWKDLAP-MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS--SISLVS-LAGSLYAIG 260 (318)
T ss_dssp -EEEEECC-CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB--SCEEEE-ETTEEEEEC
T ss_pred -EEEECCC-CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc--ceEEEE-ECCEEEEEC
Confidence 2222211 111 1112223366777777643 35778998765432 22222211 112222 256666776
Q ss_pred eCC--------------CcEEEEeCCCcc
Q 029743 142 SHD--------------SMLKLWDLDDIL 156 (188)
Q Consensus 142 ~~d--------------~~i~iwd~~~~~ 156 (188)
+.+ ..+.+||+.+..
T Consensus 261 G~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 261 GFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp CBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred CeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 643 357788887643
No 319
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.76 E-value=0.085 Score=37.89 Aligned_cols=152 Identities=13% Similarity=0.042 Sum_probs=89.2
Q ss_pred eecccCeEEEEeC-------CCcEEEEEcCCCceeeeecccccceEEEEEEe--CC-CEEEEecC---CCeEEEEEeCCc
Q 029743 3 FAADAMKLLGTSG-------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMK--NG-RKVVCGSQ---SGTVLLYSWGYF 69 (188)
Q Consensus 3 ~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~l~~~~~---d~~i~~~d~~~~ 69 (188)
.+++.++++..+- .|.+.+|..+.+. -+.+.+|......+.... .. ..++.+.. .+.+++.++...
T Consensus 159 ~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 159 TDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 237 (365)
T ss_dssp ECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSC
T ss_pred ECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 3567777665432 3677888877543 356677755443332211 11 23333332 258889888543
Q ss_pred --cc-cc-----ceeee--ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE
Q 029743 70 --KD-CS-----DRFVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 70 --~~-~~-----~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
+. .. ..+.. ......-++ .++....++.-+.-|.|++||+.++.++..-+-..+ +|..-+-+....-+
T Consensus 238 ~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d-~iF~ta~~~~~~Gi 316 (365)
T 2xzh_A 238 PTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGI 316 (365)
T ss_dssp CTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEEEGGGTEE
T ss_pred CCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC-ceEEecccCCCCcE
Confidence 11 11 00111 012223344 577777888889999999999999999876655544 67655655554455
Q ss_pred EEEeCCCcEEEEeCCCcc
Q 029743 139 GSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~ 156 (188)
+.....|.|.--.++...
T Consensus 317 ~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 317 IGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEETTCEEEEEEECTTT
T ss_pred EEEcCCCEEEEEEECccc
Confidence 566678887776666543
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.76 E-value=0.04 Score=37.17 Aligned_cols=131 Identities=8% Similarity=-0.028 Sum_probs=72.1
Q ss_pred cCeEEEEeCCCcEEEEEcCCCce------eeeeccc--ccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 7 AMKLLGTSGDGTLSVCNLRKNTV------QTRSEFS--EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 7 ~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
...|+....| ++++=....+.. ...+ +. =..+..++|+|+|.+.++ .++.+.-.+..+ ..-..+.+
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t--~~~~~W~~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPT--HDNDNWMG 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCC--STTCCHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCC--CCcccccc
Confidence 4456666676 666554444331 1111 22 246789999999886666 667655444322 11111111
Q ss_pred ccCCc--------eeEE-eecCCCEEEEecCCCeEEEEecccCee-e-----eecccCCCcceeEEEeeCCCCEEEEEeC
Q 029743 79 LSPNS--------VDAL-LKLDEDRVITGSENGLISLVGILPNRI-I-----QPIAEHSEYPIESLALSHDRKFLGSISH 143 (188)
Q Consensus 79 ~~~~~--------v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~-~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 143 (188)
.... -.++ |.|+|.+.++ .||.|+-++..+... . ..+-...-..+..|.|.|+|.+.+..
T Consensus 78 -s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 78 -RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp -HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--
T ss_pred -cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--
Confidence 1111 3566 6899988777 558888777533111 0 11111111257899999999776655
Q ss_pred CCcEE
Q 029743 144 DSMLK 148 (188)
Q Consensus 144 d~~i~ 148 (188)
|+.++
T Consensus 153 dg~ly 157 (236)
T 1tl2_A 153 GQQFY 157 (236)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 77644
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.54 E-value=0.11 Score=36.54 Aligned_cols=144 Identities=8% Similarity=0.006 Sum_probs=72.0
Q ss_pred ccCeEEEEeC-----C------CcEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC--------CeEEEE
Q 029743 6 DAMKLLGTSG-----D------GTLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS--------GTVLLY 64 (188)
Q Consensus 6 ~~~~l~~~~~-----d------~~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~ 64 (188)
+++.++.|+. . ..+.+||..+++-.. .++...... +++. -+++.++.|+.+ ..+.+|
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEEEE
Confidence 5667777763 1 126778887764322 122111111 2222 266677777632 358888
Q ss_pred EeCCcccccceeeec-cCCceeEEeecCCCEEEEecC------CCeEEEEecccCeee--eecccCCCcceeEEEeeCCC
Q 029743 65 SWGYFKDCSDRFVGL-SPNSVDALLKLDEDRVITGSE------NGLISLVGILPNRII--QPIAEHSEYPIESLALSHDR 135 (188)
Q Consensus 65 d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~~~~~------d~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 135 (188)
|..+. ....+... ....-.++...+++.++.|+. -..+.+||+.+.+-. ..+..... -.+++. -++
T Consensus 123 d~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~-~~~ 197 (315)
T 4asc_A 123 DRLSF--KWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS--LFGATV-HDG 197 (315)
T ss_dssp ETTTT--EEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB--SCEEEE-ETT
T ss_pred CCCCC--cEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh--ceEEEE-ECC
Confidence 87642 11111110 111112223456667777765 246889998876532 22222111 112222 266
Q ss_pred CEEEEEeCCC-----cEEEEeCCCcc
Q 029743 136 KFLGSISHDS-----MLKLWDLDDIL 156 (188)
Q Consensus 136 ~~l~~~~~d~-----~i~iwd~~~~~ 156 (188)
+.++.|+.++ .+.+||+.+..
T Consensus 198 ~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 198 RIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EEEEEeccCCCCccceEEEEECCCCe
Confidence 7777777543 58889987653
No 322
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.53 E-value=0.12 Score=36.77 Aligned_cols=109 Identities=8% Similarity=-0.024 Sum_probs=60.6
Q ss_pred ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceee-eccCCceeEE-eecCCCEEEEecCCCeEEEEecccC
Q 029743 35 FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFV-GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN 112 (188)
Q Consensus 35 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~ 112 (188)
.+...+..+++.+++..++.+...+..+-.|- .+...+.+. . ....+..+ +.++++.++. +.+|.+++.....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~--gG~tW~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP--GQTAWEPHNRT-TSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECT--TCSSCEEEECC-SSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCC--CCCceeECCCC-CCCccceeEECCCCCEEEE-eCCceEEEecCCCC
Confidence 34557889999998887776654433333332 122222222 2 33456666 5788776544 45677776643324
Q ss_pred eeeeecccC---CCcceeEEEeeCCCCEEEEEeCCCcEE
Q 029743 113 RIIQPIAEH---SEYPIESLALSHDRKFLGSISHDSMLK 148 (188)
Q Consensus 113 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~ 148 (188)
+.-..+... ....+..+++.+++..++++ .++.|.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i~ 273 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGALL 273 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCEE
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeEE
Confidence 432222211 11247889998877766655 466663
No 323
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.46 E-value=0.25 Score=39.56 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=79.6
Q ss_pred eEEEEeCCCcEEEEEcCCCceeeee---cccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee--ccCCc
Q 029743 9 KLLGTSGDGTLSVCNLRKNTVQTRS---EFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG--LSPNS 83 (188)
Q Consensus 9 ~l~~~~~d~~i~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~ 83 (188)
.|-.|+.++-|..++..++...... ......|.++...+++++. .|+.++-+..++..+. ....+.. .....
T Consensus 375 ~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~ 451 (781)
T 3v9f_A 375 KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLK--KFQIIELEKNELLD 451 (781)
T ss_dssp CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSC--EEEECCSTTTCCCC
T ss_pred CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCC--cEEEeccCCCCCCe
Confidence 3445555566888887654332211 1123568888887766654 4666566888876532 2222221 02346
Q ss_pred eeEEe-ecCCCEEEEecCCCeEEEEecccCeeeeecccC----CCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 84 VDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEH----SEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 84 v~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
+.+++ .++|.+ ..|+. +-|..++..+++........ ....|.++...++|...+ ++.++-|..||..+.
T Consensus 452 v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 452 VRVFYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp EEEEEECTTSEE-EEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred EEEEEECCCCCE-EEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence 77774 556654 44455 45888998766543221111 012688998888887655 444444777887654
No 324
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.43 E-value=0.097 Score=40.34 Aligned_cols=103 Identities=13% Similarity=0.042 Sum_probs=64.8
Q ss_pred ccceEEEEEEeCCCEEEEecC-CCeEEEEEeCCccc--------c----cceeeeccCCceeEEeecCCCEEEEecCCCe
Q 029743 37 EEELTSVVLMKNGRKVVCGSQ-SGTVLLYSWGYFKD--------C----SDRFVGLSPNSVDALLKLDEDRVITGSENGL 103 (188)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~--------~----~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~ 103 (188)
......+..+|||+++++++. +.++.++|+..... . ...... ..++....|.++|.-..+.-.|..
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecce
Confidence 345678899999999887654 67899999863111 0 111122 234555558899955556668999
Q ss_pred EEEEecccC----------eeeeecccCCCcceeEEEe------eCCCCEEEEEe
Q 029743 104 ISLVGILPN----------RIIQPIAEHSEYPIESLAL------SHDRKFLGSIS 142 (188)
Q Consensus 104 v~~~d~~~~----------~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~ 142 (188)
|.-|++... ..+..+..|. ++-.+.- .++|++|++..
T Consensus 401 vvkWni~~a~~~~~g~~~~~v~~k~dv~Y--qpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 401 VVKWNMEEAVRAYKGEKVNYIKQKLDVHY--QPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEHHHHHHHHTTCCCCCEEEEEECSS--CEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEEeccHHHHHhcCccCCeeeecccccc--CCcccccCCCccCCCCccEEEEec
Confidence 999999753 3444455553 3333433 45777777664
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.29 E-value=0.15 Score=36.84 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=57.0
Q ss_pred cceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc-cccee---eeccCCceeEE-eecC---CCEEEEecC----C----
Q 029743 38 EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSDRF---VGLSPNSVDAL-LKLD---EDRVITGSE----N---- 101 (188)
Q Consensus 38 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~---~~~~~~~v~~~-~~~~---~~~l~~~~~----d---- 101 (188)
.....++|.|+|+++++ ..++.|++++.. +. .+..+ .. .......+ ++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G~~~~~~~~v~~~-g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPS--GKKLVASFDVANV-GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSS--CEEEEEECCCCCS-TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--CceEeeccceeec-CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45789999999985555 555889888732 22 11111 11 12345666 7887 455554432 2
Q ss_pred CeEEEEecccC-------eee-eecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 102 GLISLVGILPN-------RII-QPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 102 ~~v~~~d~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
+.|..++.... +.+ ..+..........|+|.|||.++++.+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777776543 111 112211111346799999998666643
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.27 E-value=0.19 Score=36.22 Aligned_cols=102 Identities=14% Similarity=0.162 Sum_probs=57.8
Q ss_pred cceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccce---eeeccCCceeEE-eecC---CCEEEEecC-C-----CeE
Q 029743 38 EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDR---FVGLSPNSVDAL-LKLD---EDRVITGSE-N-----GLI 104 (188)
Q Consensus 38 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~---~~~~~~~~v~~~-~~~~---~~~l~~~~~-d-----~~v 104 (188)
.....++|.|+|+++++ ...+.|++++ ......+.. ... .......+ ++|+ +..|+++.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~-g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHR-GESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCS-TTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeec-CCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 35689999999986555 4568999988 321111111 111 23345667 7887 555555443 2 567
Q ss_pred EEEecccCe-----ee-eeccc--CCCcceeEEEeeCCCCEEEEEe
Q 029743 105 SLVGILPNR-----II-QPIAE--HSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 105 ~~~d~~~~~-----~~-~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
..++...+. .+ ..+.. ........++|.|+|..+++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 778776431 11 11321 1111346899999997666543
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.015 Score=41.95 Aligned_cols=113 Identities=13% Similarity=0.143 Sum_probs=69.4
Q ss_pred cCeEEEEeCCCcEEEEEcCCCceeeeeccc-ccceEEEEEE--e-CCCEEEEe-cCCCeEEEEEeCCcccccceeee---
Q 029743 7 AMKLLGTSGDGTLSVCNLRKNTVQTRSEFS-EEELTSVVLM--K-NGRKVVCG-SQSGTVLLYSWGYFKDCSDRFVG--- 78 (188)
Q Consensus 7 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~--- 78 (188)
+.+++.++.||.|+-+|..+|+.+..++.. ..++....-. + ++..++.. ..||.+..++...+ .....+.-
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG-LQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE-EEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC-cEEeeeccccc
Confidence 347889999999999999999998888743 1222221100 1 22333343 57899988887653 22222211
Q ss_pred ccCCceeEE----e-e----cCCCEEEEecCCCeEEEEecccCeeeeeccc
Q 029743 79 LSPNSVDAL----L-K----LDEDRVITGSENGLISLVGILPNRIIQPIAE 120 (188)
Q Consensus 79 ~~~~~v~~~----~-~----~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~ 120 (188)
....++..- . . ..+..+++|+.++.+...|+++|+.+.++..
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 001111110 0 0 1466888999999999999999998887754
No 328
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.15 E-value=0.21 Score=35.36 Aligned_cols=137 Identities=9% Similarity=0.069 Sum_probs=78.3
Q ss_pred eecccCeEEEEeC--CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCC--------------CeEEEEEe
Q 029743 3 FAADAMKLLGTSG--DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQS--------------GTVLLYSW 66 (188)
Q Consensus 3 ~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~~~d~ 66 (188)
|++++.+|+.... ++.|+..+....... .+... . +--+++++.+|+.+... ..|+..++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~-~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIH-KLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCE-EEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCE-EccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 5667788877642 567777776544433 33321 2 33468899988876553 24555555
Q ss_pred CCcccccceeeeccCCceeEEeecCCCEEEEec----CCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 67 GYFKDCSDRFVGLSPNSVDALLKLDEDRVITGS----ENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 67 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~----~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
+ +.....+.. .. ...++++++.|+-.. ....|+..++.. .....+..+ . + .+++++++.|+-.+
T Consensus 96 d--g~~~~~l~~-~~---~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~-~--~--~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 N--GHGSTVLDP-DP---CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNH-Y--L--FTCNTSDRYFYYNN 163 (302)
T ss_dssp T--SCCCEEEEC-SC---EEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESS-C--C--CCSEEETTEEEEEC
T ss_pred C--CCcceEeec-CC---ccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCC-C--c--eEeeEECCEEEEEe
Confidence 4 333333433 21 123688888887665 344566666653 333444433 1 2 35677888887555
Q ss_pred C-CCcEEEEeCCCcc
Q 029743 143 H-DSMLKLWDLDDIL 156 (188)
Q Consensus 143 ~-d~~i~iwd~~~~~ 156 (188)
. ...|.+-++....
T Consensus 164 ~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 164 PKNGQLYRYDTASQS 178 (302)
T ss_dssp TTTCCEEEEETTTTE
T ss_pred CCCceEEEEECCCCC
Confidence 4 5677777776544
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.14 E-value=0.28 Score=36.79 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=92.2
Q ss_pred eecccCeEEEEeC-------CCcEEEEEcCCCceeeeecccccceEEEEEEeCC---CEEEEecC---CCeEEEEEeCCc
Q 029743 3 FAADAMKLLGTSG-------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNG---RKVVCGSQ---SGTVLLYSWGYF 69 (188)
Q Consensus 3 ~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~---d~~i~~~d~~~~ 69 (188)
.+++.++++..+- .|.+.+|..+.+. -+.+.+|......+....+. ..++.+.. .+.+++.++...
T Consensus 158 ~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~ 236 (494)
T 1bpo_A 158 TDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (494)
T ss_dssp ECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCC
T ss_pred ECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 4667788764432 3677888877554 35667776554444332111 23333433 278999998643
Q ss_pred --cc-ccc--e---eee--ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE
Q 029743 70 --KD-CSD--R---FVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 70 --~~-~~~--~---~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
+. ... . +.. ......-++ .++....++..+.-|.|++||+.++.++..-+-..+ +|..-+-+....-+
T Consensus 237 ~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~-~iF~t~~~~~~~Gi 315 (494)
T 1bpo_A 237 PTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGI 315 (494)
T ss_dssp CTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS-CEEEEEEETTTTEE
T ss_pred ccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC-ceEEecccCCCCcE
Confidence 11 110 0 111 012223344 678788888999999999999999998876655444 67666666655556
Q ss_pred EEEeCCCcEEEEeCCCcc
Q 029743 139 GSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~ 156 (188)
+.....|.|.--.++...
T Consensus 316 ~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 316 IGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEETTCEEEEEEECTTT
T ss_pred EEEccCceEEEEEEcccc
Confidence 666678887777666543
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.01 E-value=0.24 Score=34.91 Aligned_cols=143 Identities=8% Similarity=-0.039 Sum_probs=70.4
Q ss_pred ccCeEEEEeC----CC-------cEEEEEcCCCceee--eecccccceEEEEEEeCCCEEEEecCC-------CeEEEEE
Q 029743 6 DAMKLLGTSG----DG-------TLSVCNLRKNTVQT--RSEFSEEELTSVVLMKNGRKVVCGSQS-------GTVLLYS 65 (188)
Q Consensus 6 ~~~~l~~~~~----d~-------~i~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d 65 (188)
+++.++.|+. ++ .+.+||..+.+-.. .++........+. -+++.++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE--VDDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE--ECCEEEEEcCccCCCCcccceEEEEe
Confidence 5666777763 11 16778877654322 1221111112222 266777777653 2477777
Q ss_pred eCCcccccceeeeccCCc--eeEEeecCCCEEEEecC------CCeEEEEecccCeee--eecccCCCcceeEEEeeCCC
Q 029743 66 WGYFKDCSDRFVGLSPNS--VDALLKLDEDRVITGSE------NGLISLVGILPNRII--QPIAEHSEYPIESLALSHDR 135 (188)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~l~~~~~------d~~v~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 135 (188)
..+. ....+.. ...+ -.++...++++++.|+. ...+.+||+.+.+-. ..+..... -.+++.. ++
T Consensus 134 ~~~~--~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~~~~~~-~~ 207 (318)
T 2woz_A 134 PVAA--KWSEVKN-LPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS--MFGVAIH-KG 207 (318)
T ss_dssp TTTT--EEEEECC-CSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB--SCEEEEE-TT
T ss_pred CCCC--CEeECCC-CCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc--cceEEEE-CC
Confidence 7542 2222211 1111 11222356677777763 245899998876532 22222111 1122222 56
Q ss_pred CEEEEEeCC-----CcEEEEeCCCcc
Q 029743 136 KFLGSISHD-----SMLKLWDLDDIL 156 (188)
Q Consensus 136 ~~l~~~~~d-----~~i~iwd~~~~~ 156 (188)
+.++.|+.+ ..+.+||+.+..
T Consensus 208 ~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEEcCcCCCCccceEEEEECCCCe
Confidence 677777643 357789987654
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.82 E-value=0.32 Score=34.83 Aligned_cols=137 Identities=8% Similarity=-0.023 Sum_probs=63.0
Q ss_pred CcEEEEEcCCCcee--eeecccccceEEEEEEeCCCEEEEecC------CCeEEEEEeCCcccccceeeec--cCCc-ee
Q 029743 17 GTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQ------SGTVLLYSWGYFKDCSDRFVGL--SPNS-VD 85 (188)
Q Consensus 17 ~~i~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~--~~~~-v~ 85 (188)
..+.+||+.+.+-. ..++.....-.+++. -++++++.|+. ...+..||++........+... .... -.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 56888998775432 222211111022222 25666677654 2357778763211222222110 1111 11
Q ss_pred EEeecCCCEEEEecCC----------------------CeEEEEecccCe--eeeecccCCCcceeEEEeeCCCCEEEEE
Q 029743 86 ALLKLDEDRVITGSEN----------------------GLISLVGILPNR--IIQPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 86 ~~~~~~~~~l~~~~~d----------------------~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
++...++++++.|+.+ ..+.+||+.+.+ .+..+..... ...+...+++.++.|
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA---YGVSLPWNNSLLIIG 323 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB---SSEEEEETTEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc---cceeEEeCCEEEEEe
Confidence 2334566777777632 247789987654 3333332211 122233467777888
Q ss_pred eCCC------cEEEEeCCCccC
Q 029743 142 SHDS------MLKLWDLDDILK 157 (188)
Q Consensus 142 ~~d~------~i~iwd~~~~~~ 157 (188)
+.++ .|.++++++.+.
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSC
T ss_pred eeCCCCCEeeeEEEEEEcCcEe
Confidence 7542 355567776553
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.79 E-value=0.33 Score=34.77 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=26.9
Q ss_pred ccCeEEEEeC----------CCcEEEEEcCCCceeeeeccc-ccceEEEEEEeCCCEEEEecCC
Q 029743 6 DAMKLLGTSG----------DGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQS 58 (188)
Q Consensus 6 ~~~~l~~~~~----------d~~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d 58 (188)
++++++.|+. ...+.+||+.+.+-...-... .......+...++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 4556666655 146888888775422211111 1111121222577777887754
No 333
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.48 E-value=1 Score=38.15 Aligned_cols=146 Identities=10% Similarity=0.092 Sum_probs=81.8
Q ss_pred eecccCeEEEEeCC---------CcEEEEEcCCCceeeeeccc-ccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc
Q 029743 3 FAADAMKLLGTSGD---------GTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC 72 (188)
Q Consensus 3 ~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 72 (188)
|..+...|+++.-. ..|++.+...+..+..+... ...|...+.+ +.+++.++ ++.+.++.++. +..
T Consensus 469 f~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~-~~L 544 (1158)
T 3ei3_A 469 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHP-QEL 544 (1158)
T ss_dssp CCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEET-TEE
T ss_pred ccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeC-Cce
Confidence 34455666666431 23455554444444444422 2345555543 45666664 67888888764 221
Q ss_pred ccee-eeccCCceeEE-eec--C----CCEEEEecC-CCeEEEEecccCeeeeecccCCCcceeEEEeeC--CCCEEEEE
Q 029743 73 SDRF-VGLSPNSVDAL-LKL--D----EDRVITGSE-NGLISLVGILPNRIIQPIAEHSEYPIESLALSH--DRKFLGSI 141 (188)
Q Consensus 73 ~~~~-~~~~~~~v~~~-~~~--~----~~~l~~~~~-d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~ 141 (188)
.... .. -...+.|+ +.| . +++++.|.. |++|+++++...+.+....-.......++.+.. ...+|..+
T Consensus 545 ~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~ig 623 (1158)
T 3ei3_A 545 RQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCA 623 (1158)
T ss_dssp EEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEE
T ss_pred eeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEE
Confidence 1111 12 34578888 543 2 468999996 999999999876554332211111344554432 33567788
Q ss_pred eCCCcEEEEeCC
Q 029743 142 SHDSMLKLWDLD 153 (188)
Q Consensus 142 ~~d~~i~iwd~~ 153 (188)
-.||.+.-+.+.
T Consensus 624 l~dG~l~~~~~d 635 (1158)
T 3ei3_A 624 LGDGALFYFGLN 635 (1158)
T ss_dssp ETTSEEEEEEEC
T ss_pred eCCCeEEEEEEc
Confidence 889987766654
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.30 E-value=0.65 Score=36.87 Aligned_cols=147 Identities=10% Similarity=0.028 Sum_probs=76.1
Q ss_pred ccCeEEEEeCC------CcEEEEEcCCCcee--eeecccccceEEEEEEeCCCEEEEecCCC--eEEEEEeCCcccccce
Q 029743 6 DAMKLLGTSGD------GTLSVCNLRKNTVQ--TRSEFSEEELTSVVLMKNGRKVVCGSQSG--TVLLYSWGYFKDCSDR 75 (188)
Q Consensus 6 ~~~~l~~~~~d------~~i~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~ 75 (188)
+++.++.|+.+ +.+.+||..+.+-. ..++.... -.+++...+++.++.|+.++ .+.+||..+.. ...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~--W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI--FKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTE--EEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCc--eEE
Confidence 56667777643 35788888775322 22221111 12223323788888887654 68888886421 111
Q ss_pred eee-----ccCCceeEE-eecC-CCEEEEecC--C-----CeEEEEecccCee-----eeeccc---CCCcceeEEEeeC
Q 029743 76 FVG-----LSPNSVDAL-LKLD-EDRVITGSE--N-----GLISLVGILPNRI-----IQPIAE---HSEYPIESLALSH 133 (188)
Q Consensus 76 ~~~-----~~~~~v~~~-~~~~-~~~l~~~~~--d-----~~v~~~d~~~~~~-----~~~~~~---~~~~~v~~~~~~~ 133 (188)
+.. .......++ +..+ ++.++.|+. + +.+.+||+.+... -..+.. ... .-.+++...
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R-~~~~~~~~~ 606 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR-YGSQIKYIT 606 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC-BSCEEEEEE
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc-ccceEEEeC
Confidence 110 011122223 4444 667777765 2 4588999887651 111111 111 111233333
Q ss_pred CCCEEEEEeC--------CCcEEEEeCCCcc
Q 029743 134 DRKFLGSISH--------DSMLKLWDLDDIL 156 (188)
Q Consensus 134 ~~~~l~~~~~--------d~~i~iwd~~~~~ 156 (188)
+++.++.|+. ...|.+||+.+..
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 3677777774 3468999988654
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.25 E-value=0.53 Score=40.59 Aligned_cols=142 Identities=11% Similarity=0.167 Sum_probs=83.5
Q ss_pred CcEEEEEcCC-Cceeeeeccc----ccceEEEEEEeCCCEEEEec-------CCCeEEEEEeCCcccccceeeeccCCce
Q 029743 17 GTLSVCNLRK-NTVQTRSEFS----EEELTSVVLMKNGRKVVCGS-------QSGTVLLYSWGYFKDCSDRFVGLSPNSV 84 (188)
Q Consensus 17 ~~i~i~~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~~v 84 (188)
..|+-|++.. ..+.+.+..| ...|..-..+++.++++..+ -.|.+.+|.++ +...+.+.| |...-
T Consensus 125 ~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~e--r~~sQ~ieg-ha~~F 201 (1630)
T 1xi4_A 125 NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD--RKVSQPIEG-HAASF 201 (1630)
T ss_pred CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecc--cccchhhhH-hHhhh
Confidence 5577777753 2333344333 34566666677777766432 34789999986 456666777 65544
Q ss_pred eEE-e--ecC-CCEEEEecC---CCeEEEEecccC---eeeee-----c--c--cCCCcceeEEEeeCCCCEEEEEeCCC
Q 029743 85 DAL-L--KLD-EDRVITGSE---NGLISLVGILPN---RIIQP-----I--A--EHSEYPIESLALSHDRKFLGSISHDS 145 (188)
Q Consensus 85 ~~~-~--~~~-~~~l~~~~~---d~~v~~~d~~~~---~~~~~-----~--~--~~~~~~v~~~~~~~~~~~l~~~~~d~ 145 (188)
..+ . .+. .+.++.+.. .++++|.++... .+... + . ...++|| ++..++....+...+.-|
T Consensus 202 ~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv-~~~vs~k~g~iy~itk~G 280 (1630)
T 1xi4_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITKYG 280 (1630)
T ss_pred heeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcce-EEEeccccCEEEEEecCc
Confidence 433 2 222 233333322 368888887532 11110 1 1 1123344 577788777888888999
Q ss_pred cEEEEeCCCccCCCCCC
Q 029743 146 MLKLWDLDDILKGSGNN 162 (188)
Q Consensus 146 ~i~iwd~~~~~~~~~~~ 162 (188)
.|++||+.++...-..+
T Consensus 281 ~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 281 YIHLYDLETGTCIYMNR 297 (1630)
T ss_pred eEEEEecccchhhhhcc
Confidence 99999999988654433
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.86 E-value=0.74 Score=33.27 Aligned_cols=105 Identities=10% Similarity=0.015 Sum_probs=58.6
Q ss_pred ccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc-ccce----eeeccCCceeEE-eecC---CCEEEEe---cCCCeE
Q 029743 37 EEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-CSDR----FVGLSPNSVDAL-LKLD---EDRVITG---SENGLI 104 (188)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~----~~~~~~~~v~~~-~~~~---~~~l~~~---~~d~~v 104 (188)
-...+.|+|.|+|+++++.-..|.|++++...... .+.. +.. .......+ ++|+ +..|++. ..++.|
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~-g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPS-GEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCB-TTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeec-CCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 34678999999999887776688998887543111 1111 111 23445667 6874 3444432 234556
Q ss_pred EEEecccC----------eee-eecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 105 SLVGILPN----------RII-QPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 105 ~~~d~~~~----------~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
.-|.+..+ +.+ ..+..........|+|.|||.++++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 55655431 111 122211111346799999998777654
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.37 E-value=0.99 Score=32.56 Aligned_cols=144 Identities=10% Similarity=0.107 Sum_probs=87.8
Q ss_pred eecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCC
Q 029743 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPN 82 (188)
Q Consensus 3 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 82 (188)
.+|..+.+|.-. ...+.|+|+++...++...- ...|.-=.|-.+. .|+..+ +..|+.|++.....+.+.+.. |..
T Consensus 74 MnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR-~~~ 148 (365)
T 2xzh_A 74 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDR-HSS 148 (365)
T ss_dssp ECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEEC-CGG
T ss_pred eCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeec-chh
Confidence 578777777766 68899999999988887764 4567776776543 333333 347999999755566666665 432
Q ss_pred c----eeEE-eecCCCEEEEecC-------CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCC-----EEEEEeC--
Q 029743 83 S----VDAL-LKLDEDRVITGSE-------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRK-----FLGSISH-- 143 (188)
Q Consensus 83 ~----v~~~-~~~~~~~l~~~~~-------d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~-- 143 (188)
- +..- .+++.+.++..+- .|.+.+|..+. +..+.+.+|.. .-..+-.+|. .++.+..
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa---~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAA---SFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEE---EEEEECCTTCSSCEEEEEEEEEET
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeee---eeEEEecCCCCCCceEEEEEEecC
Confidence 1 2222 3677776554332 36688898764 34456677732 2223322222 3333322
Q ss_pred -CCcEEEEeCCCc
Q 029743 144 -DSMLKLWDLDDI 155 (188)
Q Consensus 144 -d~~i~iwd~~~~ 155 (188)
.+.++|-++...
T Consensus 225 ~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 225 AGGKLHIIEVGTP 237 (365)
T ss_dssp TEEEEEEEECSSC
T ss_pred CCcEEEEEEcCCC
Confidence 258999998654
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.03 E-value=1.4 Score=33.04 Aligned_cols=105 Identities=9% Similarity=0.051 Sum_probs=56.8
Q ss_pred cceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccc--cceeee-----ccCCceeEE-eecC---CCEEEEecC------
Q 029743 38 EELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDC--SDRFVG-----LSPNSVDAL-LKLD---EDRVITGSE------ 100 (188)
Q Consensus 38 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~-----~~~~~v~~~-~~~~---~~~l~~~~~------ 100 (188)
...++|+|.|+|+++++-...+.|++++... +.. +..+.. ........+ ++|+ +..|++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~-g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPES-GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT-CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCC-CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3567999999999887765555787776532 221 111110 012334566 7885 555544432
Q ss_pred -------CCeEEEEecccC-------eeee-ecccCCCcceeEEEeeCCCCEEEEEeC
Q 029743 101 -------NGLISLVGILPN-------RIIQ-PIAEHSEYPIESLALSHDRKFLGSISH 143 (188)
Q Consensus 101 -------d~~v~~~d~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~ 143 (188)
...|.-++...+ +.+. .+..........|+|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 1111 122111124688999999987776553
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.91 E-value=0.21 Score=36.00 Aligned_cols=107 Identities=8% Similarity=-0.026 Sum_probs=61.4
Q ss_pred CEEEEecCCCeEEEEEeCCcccccceeeecc-CCceeEEe---ec-CCCEEEEe-cCCCeEEEEecccCeeeeecccCCC
Q 029743 50 RKVVCGSQSGTVLLYSWGYFKDCSDRFVGLS-PNSVDALL---KL-DEDRVITG-SENGLISLVGILPNRIIQPIAEHSE 123 (188)
Q Consensus 50 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~~~v~~~~---~~-~~~~l~~~-~~d~~v~~~d~~~~~~~~~~~~~~~ 123 (188)
..++.++.||.|.-+|..+ ++.+-.+.. . ..++...- .+ ++..++.. ..||.|+.++..+|.....+....-
T Consensus 11 ~~V~v~t~dG~l~Ald~~t-G~~~W~~~~-~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRN-GHIIWSIEP-ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTT-TEEEEEECG-GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCC-CcEEEEecC-CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 4677888888888888765 455555543 2 12222221 12 22333343 6899999999887765443332210
Q ss_pred cceeEEEee-----------CCCCEEEEEeCCCcEEEEeCCCccCC
Q 029743 124 YPIESLALS-----------HDRKFLGSISHDSMLKLWDLDDILKG 158 (188)
Q Consensus 124 ~~v~~~~~~-----------~~~~~l~~~~~d~~i~iwd~~~~~~~ 158 (188)
.....+... ..+..+++++.++.+...|+++++..
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 000111211 03457788888999999998887643
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.59 E-value=2.2 Score=33.87 Aligned_cols=148 Identities=9% Similarity=0.031 Sum_probs=77.9
Q ss_pred ccCeEEEEeCC----CcEEEEEcCCCceeeee-c------ccccceEEEEEEe-CCCEEEEecCC------CeEEEEEeC
Q 029743 6 DAMKLLGTSGD----GTLSVCNLRKNTVQTRS-E------FSEEELTSVVLMK-NGRKVVCGSQS------GTVLLYSWG 67 (188)
Q Consensus 6 ~~~~l~~~~~d----~~i~i~~~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~ 67 (188)
++..++.|+.+ ..+.+||..+++-...- . .....-.+++..+ +++.++.|+.+ ..+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45666677643 46788888776432221 1 0111123334333 67777777654 357788876
Q ss_pred Ccccccceeeec--cCCceeEEeecCCCEEEEecCCC--eEEEEecccCeeeee-----cccCCCcceeEEEeeCC-CCE
Q 029743 68 YFKDCSDRFVGL--SPNSVDALLKLDEDRVITGSENG--LISLVGILPNRIIQP-----IAEHSEYPIESLALSHD-RKF 137 (188)
Q Consensus 68 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~d~--~v~~~d~~~~~~~~~-----~~~~~~~~v~~~~~~~~-~~~ 137 (188)
+. ....+... ......++.-.+++.++.|+.++ .+.+||+.+..-... +..... ....+.+..+ ++.
T Consensus 477 t~--~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~-~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 477 TR--EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSL-VSAGLEFDPVSKQG 553 (695)
T ss_dssp TT--EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCC-BSCEEEEETTTTEE
T ss_pred CC--cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCccc-ceeEEEEeCCCCEE
Confidence 42 11111110 11111222224788888887544 689999887653221 111111 1233555555 666
Q ss_pred EEEEeC--C-----CcEEEEeCCCcc
Q 029743 138 LGSISH--D-----SMLKLWDLDDIL 156 (188)
Q Consensus 138 l~~~~~--d-----~~i~iwd~~~~~ 156 (188)
++.|+. + +.+.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 677765 2 458889987665
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.45 E-value=2 Score=37.31 Aligned_cols=152 Identities=13% Similarity=0.044 Sum_probs=82.0
Q ss_pred eecccCeEEEEeC-------CCcEEEEEcCCCceeeeecccccceEEEEEE--eCC-CEEEEecC---CCeEEEEEeCCc
Q 029743 3 FAADAMKLLGTSG-------DGTLSVCNLRKNTVQTRSEFSEEELTSVVLM--KNG-RKVVCGSQ---SGTVLLYSWGYF 69 (188)
Q Consensus 3 ~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~~~~---d~~i~~~d~~~~ 69 (188)
.+++.++++..+- .|.+.+|..+.+. -+.+.||.+....+... +.. ..++.+.. .+.+++-++...
T Consensus 158 ~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 158 TDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred eCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCC
Confidence 3567777664432 4778888876543 24556665544443332 111 22222222 268888888542
Q ss_pred --cc-cc-----ceeee--ccCCceeEE-eecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEE
Q 029743 70 --KD-CS-----DRFVG--LSPNSVDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 70 --~~-~~-----~~~~~--~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 138 (188)
+. .. ..+.. .......++ .++....+...+.-|.|++||+.++.++..-+-..+ +|...+-+....-+
T Consensus 237 ~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~-~iF~~~~~~~~~g~ 315 (1630)
T 1xi4_A 237 PTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE-TIFVTAPHEATAGI 315 (1630)
T ss_pred ccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCC-ceEEeccCCCCCce
Confidence 11 11 11111 001122233 467677788888999999999999998765443333 55544444333334
Q ss_pred EEEeCCCcEEEEeCCCcc
Q 029743 139 GSISHDSMLKLWDLDDIL 156 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~~ 156 (188)
+.....|.|.--.+....
T Consensus 316 ~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 316 IGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred EEEcCCceEEEEEEccch
Confidence 444466666655555443
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.40 E-value=1.6 Score=31.50 Aligned_cols=50 Identities=6% Similarity=0.120 Sum_probs=33.3
Q ss_pred CCCEEEEecCCCeEEEEecccCeeeee---cccCCCcceeEEEeeCCCCEEEEE
Q 029743 91 DEDRVITGSENGLISLVGILPNRIIQP---IAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 91 ~~~~l~~~~~d~~v~~~d~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
+|.++++....+.|...++..++.... +... ...+..+++.|||.++++.
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDR-GQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEEEEEEEESGGG-CCCEEEEEECTTSCEEEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCC-CCceeEEEECCCCcEEEEE
Confidence 577777777788888888876543322 2222 2268899999999866543
No 343
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.66 E-value=4.2 Score=34.50 Aligned_cols=143 Identities=14% Similarity=0.140 Sum_probs=79.1
Q ss_pred ccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee-ccCCce
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG-LSPNSV 84 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~v 84 (188)
+| +|++|- ..+|++|++...+.++.-..+-..+..+.....+++++.|..-..+.+...+.....+..+.. .....+
T Consensus 895 ~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~v 972 (1158)
T 3ei3_A 895 NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWM 972 (1158)
T ss_dssp TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCE
T ss_pred CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccE
Confidence 35 444433 478999999866544311111112333344446789999988888888776543333333332 133456
Q ss_pred eEEeecCCCEEEEecCCCeEEEEecccC-------e-eeeecccCCCcceeEEE---eeCC---------CCEEEEEeCC
Q 029743 85 DALLKLDEDRVITGSENGLISLVGILPN-------R-IIQPIAEHSEYPIESLA---LSHD---------RKFLGSISHD 144 (188)
Q Consensus 85 ~~~~~~~~~~l~~~~~d~~v~~~d~~~~-------~-~~~~~~~~~~~~v~~~~---~~~~---------~~~l~~~~~d 144 (188)
+++..-+...++.+..+|.+.+...... . ....-.-|-+..|+++. +.+. ...++.++.+
T Consensus 973 ta~~~ld~~t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~ 1052 (1158)
T 3ei3_A 973 SAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVN 1052 (1158)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETT
T ss_pred EEEEEEccCcEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecC
Confidence 6662223357778889999998875431 1 11111222233577665 2222 2346777888
Q ss_pred CcEEEE
Q 029743 145 SMLKLW 150 (188)
Q Consensus 145 ~~i~iw 150 (188)
|.|-+.
T Consensus 1053 GsIg~l 1058 (1158)
T 3ei3_A 1053 GMIGLV 1058 (1158)
T ss_dssp SCEEEE
T ss_pred CEEEEE
Confidence 888775
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.45 E-value=2.7 Score=31.69 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=49.0
Q ss_pred eecccCeEEEEeCCCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeee
Q 029743 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVG 78 (188)
Q Consensus 3 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 78 (188)
.+|..+.+|.-. ..++.|+|+++...++...- ...|..=.|-.+. .|+..+ +..|+.|++.....+.+.+..
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEEC
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheec
Confidence 567777777765 68999999999988877764 3456666676544 333332 347999998654455555554
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.16 E-value=2 Score=33.42 Aligned_cols=69 Identities=10% Similarity=0.099 Sum_probs=48.4
Q ss_pred eEE-eecCCCEEEEec-CCCeEEEEecccC------ee-------eeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 85 DAL-LKLDEDRVITGS-ENGLISLVGILPN------RI-------IQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 85 ~~~-~~~~~~~l~~~~-~d~~v~~~d~~~~------~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
..+ .+|||+++++++ .+.++.++|++.- +. ..+.... -.....+|.++|.-..+--.|.+|--
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G--lGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG--LGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC--SCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC--CcccEEEECCCCceEeeeeecceEEE
Confidence 344 789999987766 6889999998742 11 2222222 13667899999955556668999999
Q ss_pred EeCCCc
Q 029743 150 WDLDDI 155 (188)
Q Consensus 150 wd~~~~ 155 (188)
|++...
T Consensus 404 Wni~~a 409 (638)
T 3sbq_A 404 WNMEEA 409 (638)
T ss_dssp EEHHHH
T ss_pred EeccHH
Confidence 999864
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=90.37 E-value=1.4 Score=34.35 Aligned_cols=57 Identities=14% Similarity=0.056 Sum_probs=41.6
Q ss_pred eEE-eecCCCEEEEecCC------------CeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEE
Q 029743 85 DAL-LKLDEDRVITGSEN------------GLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSI 141 (188)
Q Consensus 85 ~~~-~~~~~~~l~~~~~d------------~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 141 (188)
-.| |+|.|.++++-..+ +.+.+.+..+++..+-+.++.++.++.++|+||++.|.+.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 445 78889877664432 3466777777877766777766789999999999988655
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.37 E-value=4.6 Score=30.43 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=30.5
Q ss_pred CeeecccC-eEEEEeCCCcEEEEEcCCCc---eeeeec-----c----cccceEEEEEEeC
Q 029743 1 MTFAADAM-KLLGTSGDGTLSVCNLRKNT---VQTRSE-----F----SEEELTSVVLMKN 48 (188)
Q Consensus 1 l~~s~~~~-~l~~~~~d~~i~i~~~~~~~---~~~~~~-----~----~~~~v~~~~~~~~ 48 (188)
|+|.|+|. .|+++...|.|++++..... .+..+. + .......|+++|+
T Consensus 19 ~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 19 ALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred EEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 57889986 56666788999999754221 111111 0 1346789999985
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.98 E-value=1.1 Score=34.95 Aligned_cols=55 Identities=13% Similarity=0.170 Sum_probs=37.5
Q ss_pred CeeecccCeEEEEeCC------------CcEEEEEcCCCceeeeecc-cccceEEEEEEeCCCEEEEe
Q 029743 1 MTFAADAMKLLGTSGD------------GTLSVCNLRKNTVQTRSEF-SEEELTSVVLMKNGRKVVCG 55 (188)
Q Consensus 1 l~~s~~~~~l~~~~~d------------~~i~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 55 (188)
|+|+|.|+++++-..+ +.+.+.+..+++..+.+.+ ....++.++|+||++.|++.
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4788999876665432 2345556666776655554 34679999999999887764
No 349
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=88.58 E-value=5.5 Score=28.87 Aligned_cols=105 Identities=10% Similarity=0.158 Sum_probs=59.3
Q ss_pred cceEEEEEEeCCCEEEEe------------cCCCeEEEEEeCCcccccceeeec------cCCceeEE-eec--CCC-EE
Q 029743 38 EELTSVVLMKNGRKVVCG------------SQSGTVLLYSWGYFKDCSDRFVGL------SPNSVDAL-LKL--DED-RV 95 (188)
Q Consensus 38 ~~v~~~~~~~~~~~l~~~------------~~d~~i~~~d~~~~~~~~~~~~~~------~~~~v~~~-~~~--~~~-~l 95 (188)
.....++..|+|..++++ ..+|.|.++|.+........+.-. ..-....+ +.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 345677778877665554 268899999986422222222210 11234555 433 454 34
Q ss_pred EEe-cC--CCeEEEEecccCe----eeeecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 96 ITG-SE--NGLISLVGILPNR----IIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 96 ~~~-~~--d~~v~~~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
+++ .. +..|.+|++..+. .+..+.+..-...+.+++.++|.+.++..
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCC
Confidence 443 33 4678888776432 33344443333678999999998877654
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=87.89 E-value=1.9 Score=33.46 Aligned_cols=55 Identities=11% Similarity=0.168 Sum_probs=37.1
Q ss_pred CeeecccCeEEEEeC------------CCcEEEEEcCCCceeeeeccc-ccceEEEEEEeCCCEEEEe
Q 029743 1 MTFAADAMKLLGTSG------------DGTLSVCNLRKNTVQTRSEFS-EEELTSVVLMKNGRKVVCG 55 (188)
Q Consensus 1 l~~s~~~~~l~~~~~------------d~~i~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 55 (188)
|.|.++|.+.++... .+.+..++..+++....+... ...++.++|+||++.|+++
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 467788877664332 124666666677766555433 3578999999999988775
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=87.82 E-value=3.9 Score=31.78 Aligned_cols=59 Identities=15% Similarity=0.043 Sum_probs=39.6
Q ss_pred eeEE-eecCCCEEEEecC------------CCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEe
Q 029743 84 VDAL-LKLDEDRVITGSE------------NGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSIS 142 (188)
Q Consensus 84 v~~~-~~~~~~~l~~~~~------------d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 142 (188)
...| |.++|.+.++... .+.|..++..+++....+.......++.++|+||++.|.++-
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3345 6788887773321 225777777777766555544344689999999999887664
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.99 E-value=5.2 Score=33.14 Aligned_cols=35 Identities=9% Similarity=0.139 Sum_probs=28.3
Q ss_pred eeEE-eecCCCEEEEecCCCeEEEEecccCeeeeec
Q 029743 84 VDAL-LKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (188)
Q Consensus 84 v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~ 118 (188)
+.++ ..++..++++-+.|+++|+|++.+++++.+.
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3344 4667889999999999999999999877654
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.50 E-value=4.8 Score=33.38 Aligned_cols=31 Identities=26% Similarity=0.139 Sum_probs=26.0
Q ss_pred eecccCeEEEEeCCCcEEEEEcCCCceeeee
Q 029743 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRS 33 (188)
Q Consensus 3 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 33 (188)
..++..++++-+.|+++++|++.+++++.+.
T Consensus 243 ~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 243 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3456778999999999999999999887654
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.86 E-value=11 Score=28.46 Aligned_cols=30 Identities=10% Similarity=0.133 Sum_probs=22.5
Q ss_pred cceEEEEEEeCCC-EEEEecCCCeEEEEEeC
Q 029743 38 EELTSVVLMKNGR-KVVCGSQSGTVLLYSWG 67 (188)
Q Consensus 38 ~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~ 67 (188)
...+.|+|.|++. .++++...|.|++++.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3568999999986 45556678999998743
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.45 E-value=4.7 Score=34.10 Aligned_cols=31 Identities=10% Similarity=0.123 Sum_probs=26.2
Q ss_pred eecCCCEEEEecCCCeEEEEecccCeeeeec
Q 029743 88 LKLDEDRVITGSENGLISLVGILPNRIIQPI 118 (188)
Q Consensus 88 ~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~ 118 (188)
..++..++++-+.|+++++|++.+++++.+.
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3567789999999999999999998876553
No 356
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=83.90 E-value=8.7 Score=26.66 Aligned_cols=143 Identities=13% Similarity=0.164 Sum_probs=83.1
Q ss_pred CeEEEEeCCCcEEEEE---cCCCceeeeecccccceEEEEEEe--CCCEEEEecCCCeEEEEEeCCcc-----cccceee
Q 029743 8 MKLLGTSGDGTLSVCN---LRKNTVQTRSEFSEEELTSVVLMK--NGRKVVCGSQSGTVLLYSWGYFK-----DCSDRFV 77 (188)
Q Consensus 8 ~~l~~~~~d~~i~i~~---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~ 77 (188)
.+|+..+..|.++-.. +........+. ....|..+.. + +...++..+.+|.++...+.... .....+.
T Consensus 36 ~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk 113 (276)
T 3no0_A 36 EGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT 113 (276)
T ss_dssp SCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC
T ss_pred CEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC
Confidence 4555556677766443 22221111132 3456666644 4 46789999999999999875421 1111122
Q ss_pred eccCCceeEE-eecCCCEEEEecCCCeEEEEeccc---------CeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcE
Q 029743 78 GLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP---------NRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSML 147 (188)
Q Consensus 78 ~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 147 (188)
. ...+..+ .......++..+..|.+..+.... |.....+... + .|..+...+++..++..+..|.+
T Consensus 114 e--gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d-~vv~~~~~~~~~~ll~~T~~G~~ 189 (276)
T 3no0_A 114 E--GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-D-ETSGLRIWNGEPYLLVITAKGRV 189 (276)
T ss_dssp T--TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-C-CEEEEEEESSCSEEEEEETTSCE
T ss_pred C--CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-C-EEEEEEEeCCCCEEEEEeCCCcE
Confidence 2 2334444 333455788888889887777532 1222233332 3 56666655666788888999999
Q ss_pred EEEeCCCcc
Q 029743 148 KLWDLDDIL 156 (188)
Q Consensus 148 ~iwd~~~~~ 156 (188)
+...+....
T Consensus 190 kr~~~~e~~ 198 (276)
T 3no0_A 190 KKISHEEIP 198 (276)
T ss_dssp EEEEGGGSC
T ss_pred EEeEHHHcc
Confidence 888776543
No 357
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.10 E-value=19 Score=28.68 Aligned_cols=137 Identities=19% Similarity=0.156 Sum_probs=73.7
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeec----ccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeec-----c
Q 029743 10 LLGTSGDGTLSVCNLRKNTVQTRSE----FSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGL-----S 80 (188)
Q Consensus 10 l~~~~~d~~i~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~ 80 (188)
|-.++.+ -|..++..+++...... .....|.++....++...+ ++.+ -+..++.... . ...+... .
T Consensus 115 lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~-~-~~~~~~~~~~~~~ 189 (758)
T 3ott_A 115 LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNG-K-FEGIPLPVHSSQS 189 (758)
T ss_dssp EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTT-E-EEEECCCCCTTCS
T ss_pred EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCC-c-eEEecCCCccccc
Confidence 4444444 57777776654332101 1124577777766666554 4444 4667776432 1 2111110 0
Q ss_pred CCceeEEe-ecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 81 PNSVDALL-KLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 81 ~~~v~~~~-~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
...+.+++ .+++..|..|+. +-+..++..+++... +.......|.++....++.+.+ |+. +-+.+++..+.
T Consensus 190 ~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~ 261 (758)
T 3ott_A 190 NLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTT 261 (758)
T ss_dssp SCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEE-EEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTS
T ss_pred cceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCC
Confidence 12367774 566776666664 457788877654322 1111122588888877776655 343 45788887654
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=79.97 E-value=14 Score=26.38 Aligned_cols=146 Identities=14% Similarity=0.161 Sum_probs=86.1
Q ss_pred ccCeEEEEeCCCcEEEEEcCC-------CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeC--Cccc-----
Q 029743 6 DAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWG--YFKD----- 71 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~----- 71 (188)
+..++++.+..|.++...+.. +.....+.. .+.+..+........++..+..|.+..+... .-..
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 467889999999999887653 111122333 4456666555566778888888988888775 2111
Q ss_pred ---ccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccC-------eeeeecc--cCCCcceeEEEeeCCCCEE
Q 029743 72 ---CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN-------RIIQPIA--EHSEYPIESLALSHDRKFL 138 (188)
Q Consensus 72 ---~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~-------~~~~~~~--~~~~~~v~~~~~~~~~~~l 138 (188)
..-.+. ....+.++ ..+++.+++..+..|.++.-.+..- +-+..+. ...+ .+-.+....+...+
T Consensus 187 ~Gv~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d-~lv~~~~~~~~~~i 263 (327)
T 3uc1_A 187 SGVQGMRFN--IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRG-RLVGALIVDDDSEL 263 (327)
T ss_dssp BCEESSCCC--TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTC-SEEEEEEECTTCEE
T ss_pred CCeeeecCC--CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCC-eEEEEEEeCCCccE
Confidence 111122 23445555 3445668889999999888776422 2222222 2123 34444444444566
Q ss_pred EEEeCCCcEEEEeCCCc
Q 029743 139 GSISHDSMLKLWDLDDI 155 (188)
Q Consensus 139 ~~~~~d~~i~iwd~~~~ 155 (188)
+..+..|.+.-+.....
T Consensus 264 ~l~T~~G~~ir~~~~~i 280 (327)
T 3uc1_A 264 YAVTSGGGVIRTAARQV 280 (327)
T ss_dssp EEEEGGGCEEEEEGGGS
T ss_pred EEEcCCCeEEEEehhhc
Confidence 66777888777776543
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.56 E-value=3 Score=35.26 Aligned_cols=31 Identities=26% Similarity=0.139 Sum_probs=26.4
Q ss_pred eecccCeEEEEeCCCcEEEEEcCCCceeeee
Q 029743 3 FAADAMKLLGTSGDGTLSVCNLRKNTVQTRS 33 (188)
Q Consensus 3 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~ 33 (188)
..++..++++-+.|++++||++.+++++.+.
T Consensus 245 ~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 245 FLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp EETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4467788999999999999999999887654
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.10 E-value=4.3 Score=32.45 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=25.8
Q ss_pred ecCCCEEEEecCCCeEEEEecccCeeeeec
Q 029743 89 KLDEDRVITGSENGLISLVGILPNRIIQPI 118 (188)
Q Consensus 89 ~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~ 118 (188)
..+..++++-+.|+++|+|++++++++.+.
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 455789999999999999999999877654
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.16 E-value=16 Score=25.36 Aligned_cols=129 Identities=12% Similarity=0.075 Sum_probs=62.4
Q ss_pred CCcEEEEEcCC-CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCceeEEeecCCCE
Q 029743 16 DGTLSVCNLRK-NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDR 94 (188)
Q Consensus 16 d~~i~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 94 (188)
++.|+.|-... +++- ........|..++... .+.+.-. ++.+..|-....++. ..... ....+..+..-....
T Consensus 119 ~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~gql-g~p~~-~~~~v~~i~~G~~hs 192 (282)
T 3qhy_B 119 DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFGQT-TVPAE-AQSGVDDVAGGIFHS 192 (282)
T ss_dssp TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTT-SCCGG-GGSSEEEEEECSSEE
T ss_pred CCeEEEecCCCCCcCC-CCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCCCC-CCcee-cCCCeEEEEecCCEE
Confidence 77777776543 2221 1111233455555432 2222233 688888876543322 11111 223455553322333
Q ss_pred EEEecCCCeEEEEecccCeee-eecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCccC
Q 029743 95 VITGSENGLISLVGILPNRII-QPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDILK 157 (188)
Q Consensus 95 l~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 157 (188)
++. .+|.|+.|-......+ ...... . .|..++.-... .++. . |+.|+.|-.+...+
T Consensus 193 ~al--~~G~v~~wG~n~~gqlg~p~~~~-~-~v~~i~~G~~h-~~al-~-~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 193 LAL--KDGKVIAWGDNRYKQTTVPTEAL-S-GVSAIASGEWY-SLAL-K-NGKVIAWGSSRTAP 249 (282)
T ss_dssp EEE--ETTEEEEEECCTTSTTCCCGGGG-S-SCCEEEECSSC-EEEE-E-TTEEEEESTTCCCC
T ss_pred EEE--ECCeEEEEECCCCCCCCCCcccC-C-CceEEEcCCCE-EEEE-E-CCEEEEecCCCCcc
Confidence 344 5889999975432111 111111 2 46666654333 3333 3 89999997665433
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.50 E-value=16 Score=25.27 Aligned_cols=146 Identities=11% Similarity=0.054 Sum_probs=86.8
Q ss_pred ccCeEEEEeCCCcEEEEEcCCC------ceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccc--------
Q 029743 6 DAMKLLGTSGDGTLSVCNLRKN------TVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKD-------- 71 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-------- 71 (188)
+..+++..+.+|.++...+..- .....++ ..+.+..+........++..+..|.+..+....-..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 3567888999999998886542 1112233 234566665555566788888899988887642111
Q ss_pred ccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEeccc-------CeeeeecccCCCcceeEEEeeCCCCEEEEEeC
Q 029743 72 CSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALSHDRKFLGSISH 143 (188)
Q Consensus 72 ~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 143 (188)
..-.+. ....+..+ ..+++..++..+..|.++...+.. ++-+..+. ..+ .+-.+....+...++..+.
T Consensus 158 ~~i~L~--~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~~~-~lv~~~~~~~~~~i~~~t~ 233 (276)
T 3no0_A 158 QGIKLE--KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-TKD-TLVDLIPIKEEVELLITTK 233 (276)
T ss_dssp ECCCCC--TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-SSS-CEEEEEEESSEEEEEEEET
T ss_pred EEEccC--CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-CCC-cEEEEEEeCCCCEEEEEcC
Confidence 111122 23445555 345567888889999988887642 22233332 223 4544444334456667778
Q ss_pred CCcEEE--EeCCCcc
Q 029743 144 DSMLKL--WDLDDIL 156 (188)
Q Consensus 144 d~~i~i--wd~~~~~ 156 (188)
.|.+.. ++.....
T Consensus 234 ~G~~ir~~~~~~~i~ 248 (276)
T 3no0_A 234 NGKAFYDKINQKDIP 248 (276)
T ss_dssp TSCEEEEEEEGGGSC
T ss_pred CCeEEEeeeCHHHCC
Confidence 888887 8766543
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=73.53 E-value=5.1 Score=32.04 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=25.7
Q ss_pred ecccCeEEEEeCCCcEEEEEcCCCceeeeec
Q 029743 4 AADAMKLLGTSGDGTLSVCNLRKNTVQTRSE 34 (188)
Q Consensus 4 s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~ 34 (188)
..+..++++-+.|+++++|++.+++++....
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3456789999999999999999998776544
No 364
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=73.08 E-value=22 Score=25.12 Aligned_cols=145 Identities=9% Similarity=0.072 Sum_probs=87.1
Q ss_pred cccCeEEEEeCCCcEEEEEcCCCce-------e--eeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCc------
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRKNTV-------Q--TRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYF------ 69 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~~~~-------~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~------ 69 (188)
|+..++++.+.+|.|+-..+..-+. + ..+. ....+..+........++..+..|.++-+....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 5667889999999999887643211 1 1122 2344556555556677888888888777765321
Q ss_pred --ccc---cceeeeccCCceeEEe-ec---CCCEEEEecCCCeEEEEeccc-------CeeeeecccCCCcceeEEEeeC
Q 029743 70 --KDC---SDRFVGLSPNSVDALL-KL---DEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALSH 133 (188)
Q Consensus 70 --~~~---~~~~~~~~~~~v~~~~-~~---~~~~l~~~~~d~~v~~~d~~~-------~~~~~~~~~~~~~~v~~~~~~~ 133 (188)
+.. .-.+. ....+..++ -+ +..+++..+..|.++...+.. |.....+... + .+-.+....
T Consensus 85 ~~G~~i~~~l~l~--~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~-d-~lv~~~~~~ 160 (312)
T 1suu_A 85 SKGQNISELINLG--DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDK-D-FVTSAEIVF 160 (312)
T ss_dssp ---CBGGGTSCCC--TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTT-C-CEEEEEEEC
T ss_pred CCCcChhhccCCC--CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCC-C-EEEEEEEeC
Confidence 111 11122 234455553 22 467888899999998887743 2223334332 3 455555555
Q ss_pred CCCEEEEEeCCCcEEEEeCCC
Q 029743 134 DRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 134 ~~~~l~~~~~d~~i~iwd~~~ 154 (188)
....++..+..|.+..+.+..
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRD 181 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEEEHHH
Confidence 556788888999999888765
No 365
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=69.81 E-value=25 Score=24.35 Aligned_cols=88 Identities=11% Similarity=0.012 Sum_probs=42.6
Q ss_pred CCcEEEEEcCCCceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcccccceeeeccCCceeEEeecCCCEE
Q 029743 16 DGTLSVCNLRKNTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRFVGLSPNSVDALLKLDEDRV 95 (188)
Q Consensus 16 d~~i~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 95 (188)
|+.|+.|-....-.+.........|..++.... ..++. . |+.+..|-....++. ..... -...+..+..-.. ..
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gql-g~P~~-~~~~v~~ia~G~~-hs 114 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQT-TVPAE-ARSGVDAIAAGAW-AS 114 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTT-CCCGG-GSSSEEEEEEETT-EE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCC-CCCcc-cCCCeEEEECcCC-EE
Confidence 788888875532111111112335666665432 23333 4 888888876543322 11111 2234555532222 22
Q ss_pred EEecCCCeEEEEecc
Q 029743 96 ITGSENGLISLVGIL 110 (188)
Q Consensus 96 ~~~~~d~~v~~~d~~ 110 (188)
+.-. +|.|+.|-..
T Consensus 115 ~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 115 YALK-DGKVIAWGDD 128 (282)
T ss_dssp EEEE-TTEEEEEECC
T ss_pred EEEe-CCeEEEecCC
Confidence 2333 7788888654
No 366
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=62.10 E-value=59 Score=25.93 Aligned_cols=140 Identities=10% Similarity=0.017 Sum_probs=68.6
Q ss_pred cccCeEEEEeCCCcEEEEEcCCCceeeeec-c--cccceEEEEEEeCCCEEEEecCCCeEEEEEeCCccccccee--eec
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRKNTVQTRSE-F--SEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFKDCSDRF--VGL 79 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~ 79 (188)
++|++.+.++..+-|..+|..+++...... . ....+.++....+|++-+. +.. -+..++.... ....+ .+.
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~-Gl~~~~~~~~--~~~~~~~~gl 556 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHG-GVMRINPKDE--SQQSISFGSF 556 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETT-EEEEECC--C--CCCBCCCCC-
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecC-ceEEEecCCC--ceEEecccCC
Confidence 345544433333457778877665433211 1 1245777777767766544 444 4777776432 22222 121
Q ss_pred cCCceeEEeecCCCEEEEecCCCeEEEEecccCeeeeecccCCCcceeEEEee-CCCCEEEEEeCCCcEEEEeCCC
Q 029743 80 SPNSVDALLKLDEDRVITGSENGLISLVGILPNRIIQPIAEHSEYPIESLALS-HDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 80 ~~~~v~~~~~~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
....+.++...+| .|..++..| |..+|..+.+.. .+..... .+....+. ++| .|..|+.+| +..++.+.
T Consensus 557 ~~~~i~~i~~~~g-~lWi~t~~G-l~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~G-~l~fG~~~G-l~~f~p~~ 626 (758)
T 3ott_A 557 SNNEILSMTCVKN-SIWVSTTNG-LWIIDRKTMDAR-QQNMTNK-RFTSLLFDPKED-CVYLGGADG-FGISHSNL 626 (758)
T ss_dssp --CCEEEEEEETT-EEEEEESSC-EEEEETTTCCEE-EC--CCC-CCSEEEEETTTT-EEEEECBSE-EEEEEC--
T ss_pred CccceEEEEECCC-CEEEECCCC-eEEEcCCCceeE-EecCCCC-ceeeeEEECCCC-cEEEecCCc-eEEEChhh
Confidence 2234666644455 455556666 667887765533 2211111 33444444 355 555666666 45566554
No 367
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=56.03 E-value=63 Score=25.77 Aligned_cols=55 Identities=18% Similarity=0.252 Sum_probs=35.1
Q ss_pred eEEEEeCCCcEE-EEEcCCCc-------eeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEE
Q 029743 9 KLLGTSGDGTLS-VCNLRKNT-------VQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 9 ~l~~~~~d~~i~-i~~~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
.++.|+.+|.|+ +.....+. .+..+. ....+|..+.++++...|++++..+.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466778888874 33322211 111121 34668899999999999999998875554
No 368
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=55.35 E-value=58 Score=24.81 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=34.2
Q ss_pred EEEEecCCCeEEEEec-ccCe-------eeeecccC-CCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 94 RVITGSENGLISLVGI-LPNR-------IIQPIAEH-SEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 94 ~l~~~~~d~~v~~~d~-~~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
.+..|+.+|.|.-.-+ ..+. .+..+... .+.+|..|.++++..+|..++..+.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4667888887643322 2211 22222221 1238999999999999999988776654
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=52.75 E-value=37 Score=26.21 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=36.0
Q ss_pred CEEEEecCCCeEEEEecccC----eeeeecccCC-Cccee-EEEeeCCCCEEEEEeCCCcEEE
Q 029743 93 DRVITGSENGLISLVGILPN----RIIQPIAEHS-EYPIE-SLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 93 ~~l~~~~~d~~v~~~d~~~~----~~~~~~~~~~-~~~v~-~~~~~~~~~~l~~~~~d~~i~i 149 (188)
..++.|+.+|.|.-..+... ..+..+.-.. +.+|. .|.+++++.+|+.++..+.++|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45677888888765544422 1222222111 23785 8999999999998887766655
No 370
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=51.27 E-value=55 Score=22.32 Aligned_cols=145 Identities=12% Similarity=0.110 Sum_probs=80.7
Q ss_pred CeEEEEeCCCcEEEEEcCCCce-eeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC------cccccc-eeeec
Q 029743 8 MKLLGTSGDGTLSVCNLRKNTV-QTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY------FKDCSD-RFVGL 79 (188)
Q Consensus 8 ~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~------~~~~~~-~~~~~ 79 (188)
..+++.+.+|.|+--....-.. ...++. .+.+..+........|+..+..|.++-+.... .+..+. .+.-.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~ 81 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP 81 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC
Confidence 3456678888887666543111 112232 34455554444455666667778766655421 122111 11110
Q ss_pred cCCceeEEe-ecCCCEEEEecCCCeEEEEeccc-------CeeeeecccCCCcceeEEEee-CCCCEEEEEeCCCcEEEE
Q 029743 80 SPNSVDALL-KLDEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALS-HDRKFLGSISHDSMLKLW 150 (188)
Q Consensus 80 ~~~~v~~~~-~~~~~~l~~~~~d~~v~~~d~~~-------~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw 150 (188)
....+..++ ..++.+++.++..|.++...+.. +.....+... + .+-.+... .....++..+.+|.+..+
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d-~lv~~~~~~~~~~~i~l~T~~G~~lrf 159 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-A-HVMPPVVIEDASDMLLAITQAGRMLMF 159 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-C-CBCCCEECCCTTCEEEEEETTSEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-C-EEEEEEEecCCCCEEEEEcCCCeEEEE
Confidence 234566663 24567788899999999887742 2333334332 3 34444444 345578888889998888
Q ss_pred eCCCc
Q 029743 151 DLDDI 155 (188)
Q Consensus 151 d~~~~ 155 (188)
.+..-
T Consensus 160 ~~~ei 164 (256)
T 1zvt_A 160 PVSDL 164 (256)
T ss_dssp EGGGS
T ss_pred EHHHC
Confidence 87654
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=46.53 E-value=77 Score=22.57 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=69.8
Q ss_pred ccceEEEEEEe---CCCEEEEecCCCeEEEEEeCCcccc------cceeeeccCCceeEE-eecCCCEEEEecCCCeEEE
Q 029743 37 EEELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYFKDC------SDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISL 106 (188)
Q Consensus 37 ~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~------~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~ 106 (188)
...|.++..-+ +...++..+.+|.++.-.+...... ...+.. ...+..+ .......++..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke--~D~lv~~~~~~~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD--NDELVGAVLCSAGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT--TCCEEEEEEECTTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC--CCEEEEEEEecCCCEEEEEECCCeEEE
Confidence 44566655443 4679999999999999887532111 111222 2334444 3344567888888888877
Q ss_pred Eecc--c---------CeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 107 VGIL--P---------NRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 107 ~d~~--~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
+... . |.....+... + .|.++...+++..|+..+..|.++.-.+...
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~-d-~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~ 229 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNID-D-RLLSLNVVREGTYLLVATSGGYAKRTAIEEY 229 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTT-C-CEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred EECcccccCcCCcCCCCeeeecCCCC-C-EEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence 7655 2 1122223322 3 5666666666678888999999888776543
No 372
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=46.49 E-value=95 Score=23.67 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=35.6
Q ss_pred eEEEEeCCCcEEEEEcC-CCc-------eeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEE
Q 029743 9 KLLGTSGDGTLSVCNLR-KNT-------VQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 9 ~l~~~~~d~~i~i~~~~-~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
.++.|+.+|.|+-.-+. .+. .+..+. ....+|..+.++++..+|++++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46778888887544332 211 111222 23578999999999999999988875554
No 373
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=44.32 E-value=1.1e+02 Score=24.05 Aligned_cols=55 Identities=16% Similarity=0.079 Sum_probs=35.3
Q ss_pred eEEEEeCCCcEEEEEcCC-C----c-eeeeec--ccccceEEEEEEeCCCEEEEecCCCeEEE
Q 029743 9 KLLGTSGDGTLSVCNLRK-N----T-VQTRSE--FSEEELTSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 9 ~l~~~~~d~~i~i~~~~~-~----~-~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
.++.|+.+|.|+-.-+.. + . .+..+. ....+|..+.++++...|+.++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 467778888886443322 2 1 111222 24567899999999899999888765554
No 374
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=43.03 E-value=74 Score=24.54 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=34.8
Q ss_pred EEEEecCCCeEEEEecc-cC--eeeeecccCCCcce-eEEEeeCCCCEEEEEeCCCcEEE
Q 029743 94 RVITGSENGLISLVGIL-PN--RIIQPIAEHSEYPI-ESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 94 ~l~~~~~d~~v~~~d~~-~~--~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
.+..|+.+|.|.-.-+. .. ..+..+....+.+| ..|.++++...|+.++..+.++|
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45677888887644332 21 12222222223377 48999999999998888877766
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=41.49 E-value=89 Score=21.91 Aligned_cols=146 Identities=17% Similarity=0.193 Sum_probs=82.6
Q ss_pred ccCeEEEEeCCCcEEEEEcCC-------CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCCcc--------
Q 029743 6 DAMKLLGTSGDGTLSVCNLRK-------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGYFK-------- 70 (188)
Q Consensus 6 ~~~~l~~~~~d~~i~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-------- 70 (188)
+..+++..+..|.++...+.. +.....+... +.+..+........++..+.+|.+..+....-.
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~G 186 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTG 186 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCC
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCC
Confidence 355688888999998887642 1121223333 556666655556678888888888888764211
Q ss_pred cccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEecccC-------e--eeeecccCCCcceeEEEeeCCCCEEEE
Q 029743 71 DCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILPN-------R--IIQPIAEHSEYPIESLALSHDRKFLGS 140 (188)
Q Consensus 71 ~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~~-------~--~~~~~~~~~~~~v~~~~~~~~~~~l~~ 140 (188)
...-.+. ....+..+ ...++..+++.+..|.++-.++..- . ....+....+ .+-.+....+...++.
T Consensus 187 v~~i~L~--~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~-~lv~~~~v~~~~~l~~ 263 (307)
T 1zi0_A 187 VRGIRLG--EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNG-LVVGAVQVDDCDQIMM 263 (307)
T ss_dssp EECCCCC--TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTC-SEEEEEEECTTCEEEE
T ss_pred eEeEEeC--CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCC-eEEEEEEeCCCceEEE
Confidence 1111122 23345555 2344567888888888888776321 1 1222222223 4544444334455666
Q ss_pred EeCCCcEEEEeCCCc
Q 029743 141 ISHDSMLKLWDLDDI 155 (188)
Q Consensus 141 ~~~d~~i~iwd~~~~ 155 (188)
.+.+|.+.-+.+..-
T Consensus 264 ~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 264 ITDAGTLVRTRVSEI 278 (307)
T ss_dssp EESSCCEEEEEGGGS
T ss_pred EcCCCcEEEEecccc
Confidence 677787777776654
No 376
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=40.00 E-value=98 Score=21.95 Aligned_cols=148 Identities=11% Similarity=0.083 Sum_probs=85.8
Q ss_pred cccCeEEEEeCCCcEEEEEcCC----CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC---c-----ccc
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRK----NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY---F-----KDC 72 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~-----~~~ 72 (188)
|+...+++.+.+|.|+--.+.. +.....++. .+.+..+........|+..+..|.+.-+.... . +.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 5677888999999998776542 111112332 34455555555666777777788776665421 1 111
Q ss_pred cce-eeeccCCceeEEe-ec---CCCEEEEecCCCeEEEEeccc--------CeeeeecccCCCcceeEEEeeCCCCEEE
Q 029743 73 SDR-FVGLSPNSVDALL-KL---DEDRVITGSENGLISLVGILP--------NRIIQPIAEHSEYPIESLALSHDRKFLG 139 (188)
Q Consensus 73 ~~~-~~~~~~~~v~~~~-~~---~~~~l~~~~~d~~v~~~d~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 139 (188)
+.. +.-.....+..++ -+ ++.+++..+..|.++-..+.. +.....+... + .+-.+........++
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d-~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-D-QVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-C-CEEEEEEECSCSEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-C-EEEEEEEeCCCCEEE
Confidence 111 1110234455552 22 366889999999999887742 2222223322 3 455555555556777
Q ss_pred EEeCCCcEEEEeCCCc
Q 029743 140 SISHDSMLKLWDLDDI 155 (188)
Q Consensus 140 ~~~~d~~i~iwd~~~~ 155 (188)
..+.+|.+..+.....
T Consensus 160 l~T~~G~~irf~~~ev 175 (323)
T 1wp5_A 160 LVTHNGYALWFDESEV 175 (323)
T ss_dssp EEETTSEEEEEEGGGS
T ss_pred EEeCCCcEEEEEHHHC
Confidence 8888998888877653
No 377
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=37.65 E-value=1e+02 Score=21.61 Aligned_cols=114 Identities=14% Similarity=0.153 Sum_probs=68.2
Q ss_pred cceEEEEEEe---CCCEEEEecCCCeEEEEEeCCc------ccccceeeeccCCceeEE-eecCCCEEEEecCCCeEEEE
Q 029743 38 EELTSVVLMK---NGRKVVCGSQSGTVLLYSWGYF------KDCSDRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLV 107 (188)
Q Consensus 38 ~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~------~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~ 107 (188)
..|.++...+ +...++..+.+|.++...+... +.....+.. ...+..+ .......++..+.+|.+..+
T Consensus 100 e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~--~d~lv~~~~~~~~~~i~l~T~~G~~~r~ 177 (312)
T 1suu_A 100 EEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND--KDFVTSAEIVFKDEKVICLSKKGSAFIF 177 (312)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT--TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC--CCEEEEEEEeCCCCEEEEEeCCCcEEEE
Confidence 4455554433 4567888899999988887431 111111222 3344444 33445678888888988888
Q ss_pred eccc---------CeeeeecccCCCcceeEEEeeCCCCEEEEEeCCCcEEEEeCCCc
Q 029743 108 GILP---------NRIIQPIAEHSEYPIESLALSHDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 108 d~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
.... |.....+... + .|..+..-.++..+++.+..|..+...+...
T Consensus 178 ~~~ev~~~gR~~~Gv~~i~L~~~-d-~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 178 NSRDVRLTNRGTQGVCGMKLKEG-D-LFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EGGGSCBCCTTBCCEECCCCCTT-C-CEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred EHHHccccCCCCCCeEeEEeCCC-C-EEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 7643 1122233322 3 5666655555667888888999888887654
No 378
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=35.56 E-value=1.1e+02 Score=21.38 Aligned_cols=146 Identities=12% Similarity=0.149 Sum_probs=82.7
Q ss_pred cccCeEEEEeCCCcEEEEEcCCCceee---------eecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC---c---
Q 029743 5 ADAMKLLGTSGDGTLSVCNLRKNTVQT---------RSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY---F--- 69 (188)
Q Consensus 5 ~~~~~l~~~~~d~~i~i~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~--- 69 (188)
|+...+++.+.+|.|+--.+..-+... .++ ..+.+..+........|+..+..|.+.-+.... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 456678899999999877765421111 122 234455555555566777777788766665421 1
Q ss_pred --ccccc---eeeeccCCceeEEee----cCCCEEEEecCCCeEEEEeccc-------CeeeeecccCCCcceeEEEeeC
Q 029743 70 --KDCSD---RFVGLSPNSVDALLK----LDEDRVITGSENGLISLVGILP-------NRIIQPIAEHSEYPIESLALSH 133 (188)
Q Consensus 70 --~~~~~---~~~~~~~~~v~~~~~----~~~~~l~~~~~d~~v~~~d~~~-------~~~~~~~~~~~~~~v~~~~~~~ 133 (188)
+.++. .+. ....+..++. .++.+++..+..|.++-..+.. +.....+..+ + .+-.+....
T Consensus 80 a~G~~i~~~l~l~--~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d-~lv~~~~~~ 155 (307)
T 1zi0_A 80 ARGRPIVNLLPLE--QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-D-ELIGVDLTS 155 (307)
T ss_dssp SCCEEGGGTSCCC--TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-C-CEEEEEEEC
T ss_pred CCCeEhhhccCCC--CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-C-EEEEEEEeC
Confidence 11111 122 2344555532 3567899999999999887642 1122223333 3 455555555
Q ss_pred CCCEEEEEeCCCcEEEEeCCCc
Q 029743 134 DRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 134 ~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
....++..+..|.+..+.....
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v 177 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSV 177 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGS
T ss_pred CCCEEEEECCCCcEEEEEHHHc
Confidence 5556777888888888876553
No 379
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.40 E-value=1.6e+02 Score=23.11 Aligned_cols=55 Identities=18% Similarity=0.164 Sum_probs=34.1
Q ss_pred EEEEecCCCeEEEEec-ccC----e-eeeecc--cCCCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 94 RVITGSENGLISLVGI-LPN----R-IIQPIA--EHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 94 ~l~~~~~d~~v~~~d~-~~~----~-~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
.+..|+.+|.|.-.-+ ..+ . .+..+. .... +|..|.++++...|..++..+.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~-pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAA-AIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCC-CCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCC-ceeeEEEcCCCCEEEEEecceEEEc
Confidence 5667788887653322 222 1 122222 1223 7899999999999988887766665
No 380
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=34.28 E-value=1.8e+02 Score=23.28 Aligned_cols=55 Identities=16% Similarity=0.282 Sum_probs=34.0
Q ss_pred EEEEecCCCeEE-EEecccCe-------eeeecc--cCCCcceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 94 RVITGSENGLIS-LVGILPNR-------IIQPIA--EHSEYPIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 94 ~l~~~~~d~~v~-~~d~~~~~-------~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
.++.|+.+|.|. +.-...+. .+..+. .. +.+|..|.++++..+|.+++..+.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~-~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFRE-PTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSS-CCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCC-CceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788888764 22221111 121111 22 237999999999999999988877666
No 381
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=33.47 E-value=77 Score=24.48 Aligned_cols=56 Identities=7% Similarity=-0.042 Sum_probs=34.5
Q ss_pred CeEEEEeCCCcEEEEEcCCC----ceeeeec--ccccceE-EEEEEeCCCEEEEecCCCeEEE
Q 029743 8 MKLLGTSGDGTLSVCNLRKN----TVQTRSE--FSEEELT-SVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 8 ~~l~~~~~d~~i~i~~~~~~----~~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
..++.|+.+|.|+-..+..+ ..+..+. ....+|. .+.++++..+|++++..+.+++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 34677788888765544322 1222222 2245775 8889998889988887754433
No 382
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.55 E-value=78 Score=18.29 Aligned_cols=25 Identities=8% Similarity=-0.012 Sum_probs=14.4
Q ss_pred EEEeeCCCCEEEEEeCCCcEEEEeCCC
Q 029743 128 SLALSHDRKFLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 128 ~~~~~~~~~~l~~~~~d~~i~iwd~~~ 154 (188)
.+.+..+|.+++... ++.+ +|...+
T Consensus 60 ~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 60 FMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp EEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred EEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 466677777665432 3333 676654
No 383
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=31.09 E-value=1.5e+02 Score=21.52 Aligned_cols=151 Identities=13% Similarity=0.098 Sum_probs=89.2
Q ss_pred eeecccCeEEEEeCCCcEEEEEcCC---------CceeeeecccccceEEEEEEeCCCEEEEecCCCeEEEEEeCC---c
Q 029743 2 TFAADAMKLLGTSGDGTLSVCNLRK---------NTVQTRSEFSEEELTSVVLMKNGRKVVCGSQSGTVLLYSWGY---F 69 (188)
Q Consensus 2 ~~s~~~~~l~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~ 69 (188)
.+=|+...+++.+.+|.|+--.+.. +.....++ ....+..+........|+..+..|.+..+.... .
T Consensus 2 dlI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 2 DLIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred CcccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Confidence 4557888999999999999876532 11222233 345666666666666777777788776665421 1
Q ss_pred -----ccccce-eeeccCCceeEEe-e---cCCCEEEEecCCCeEEEEecccC-------eeeeecccCCCcceeEEEee
Q 029743 70 -----KDCSDR-FVGLSPNSVDALL-K---LDEDRVITGSENGLISLVGILPN-------RIIQPIAEHSEYPIESLALS 132 (188)
Q Consensus 70 -----~~~~~~-~~~~~~~~v~~~~-~---~~~~~l~~~~~d~~v~~~d~~~~-------~~~~~~~~~~~~~v~~~~~~ 132 (188)
+..+.. +.-.....|.+++ - .++.+++.++..|.++...+... .....+... + .+-.+...
T Consensus 81 ~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~-d-~lv~v~~~ 158 (370)
T 3l6v_A 81 GSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEG-D-ALVGVALT 158 (370)
T ss_dssp CTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTT-C-CEEEEEEE
T ss_pred CcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCC-C-EEEEEEEe
Confidence 111111 1110344566553 2 24568999999999998876432 222233322 3 44455555
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCc
Q 029743 133 HDRKFLGSISHDSMLKLWDLDDI 155 (188)
Q Consensus 133 ~~~~~l~~~~~d~~i~iwd~~~~ 155 (188)
.....++..+..|.+..+.....
T Consensus 159 ~~~~~i~l~T~~G~~irf~~~~v 181 (370)
T 3l6v_A 159 DGDRDVLLFASNGKTVRFGESTV 181 (370)
T ss_dssp CSCCEEEEEETTSEEEEEEGGGS
T ss_pred CCCceEEEEeCCCeEEEEEcccc
Confidence 55557777888888888876543
No 384
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=30.03 E-value=1.5e+02 Score=21.03 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=78.6
Q ss_pred cCeEEEEeCCCcEEEEEcC---------CCceeee-ec-ccccceEEEEEEeC---CCEEEEecCCCeEEEEEeCCcccc
Q 029743 7 AMKLLGTSGDGTLSVCNLR---------KNTVQTR-SE-FSEEELTSVVLMKN---GRKVVCGSQSGTVLLYSWGYFKDC 72 (188)
Q Consensus 7 ~~~l~~~~~d~~i~i~~~~---------~~~~~~~-~~-~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~ 72 (188)
...|+..+..|.++-+... .|.++.. +. .....|.++...++ +.+++..+.+|.++.-.+......
T Consensus 50 ~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~ 129 (323)
T 1wp5_A 50 KDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQ 129 (323)
T ss_dssp TSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCS
T ss_pred CCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhc
Confidence 3455666667776665542 1222111 11 12344665543332 567889999999999887431111
Q ss_pred -----c--ceeeeccCCceeEE-eecCCCEEEEecCCCeEEEEeccc---------CeeeeecccCCCcceeEEEeeCCC
Q 029743 73 -----S--DRFVGLSPNSVDAL-LKLDEDRVITGSENGLISLVGILP---------NRIIQPIAEHSEYPIESLALSHDR 135 (188)
Q Consensus 73 -----~--~~~~~~~~~~v~~~-~~~~~~~l~~~~~d~~v~~~d~~~---------~~~~~~~~~~~~~~v~~~~~~~~~ 135 (188)
+ -.+.. ...+..+ .......++..+.+|.+..+.... |.....+... + .|.++...+++
T Consensus 130 ~r~~G~~ai~l~e--~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~-d-~Vv~~~~~~~~ 205 (323)
T 1wp5_A 130 RYSKPLTGINLKN--DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEG-D-YIVSGQLITSK 205 (323)
T ss_dssp CCSSCEECSCCCT--TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTT-C-CEEEEEEECCT
T ss_pred cccCceEEEEeCC--CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCC-C-EEEEEEEEcCC
Confidence 1 11222 2334444 333455677888888887777642 1122223222 2 46666544444
Q ss_pred C-EEEEEeCCCcEEEEeCCC
Q 029743 136 K-FLGSISHDSMLKLWDLDD 154 (188)
Q Consensus 136 ~-~l~~~~~d~~i~iwd~~~ 154 (188)
. .|++.+..|..+..++..
T Consensus 206 ~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 206 DESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp TCEEEEEETTSEEEEEEGGG
T ss_pred CcEEEEEECCCceEEEEHHH
Confidence 4 677888888888777665
No 385
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=29.01 E-value=1.8e+02 Score=23.39 Aligned_cols=57 Identities=16% Similarity=0.254 Sum_probs=34.8
Q ss_pred CEEEEecCCCeEEEEeccc-C---eeeeecccC-CCcce-eEEEeeCCCCEEEEEeCCCcEEE
Q 029743 93 DRVITGSENGLISLVGILP-N---RIIQPIAEH-SEYPI-ESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 93 ~~l~~~~~d~~v~~~d~~~-~---~~~~~~~~~-~~~~v-~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
..++.|+.+|.|.-.-+.. . ..+..+... .+.+| ..|.++++..+|+.++..+.+++
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3566788888876443332 1 122222111 12266 68999998889988887776665
No 386
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.09 E-value=2.6e+02 Score=22.28 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=35.3
Q ss_pred eEEEEeCCCcEEEE-EcCCCc-eeeeec--ccccceEEEEEEeCC--CEEEEecCCCeEEE
Q 029743 9 KLLGTSGDGTLSVC-NLRKNT-VQTRSE--FSEEELTSVVLMKNG--RKVVCGSQSGTVLL 63 (188)
Q Consensus 9 ~l~~~~~d~~i~i~-~~~~~~-~~~~~~--~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~ 63 (188)
.++.|+.+|.|.-. ....+. .+..+. ....+|..+.++++. ..|++++..+.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 57788888887543 433321 111111 245688899999987 88988888775554
No 387
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=24.61 E-value=2.2e+02 Score=22.03 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=34.2
Q ss_pred eEEEEeCCCcEEEEEcC-CC--ceeeeec-ccccce-EEEEEEeCCCEEEEecCCCeEEE
Q 029743 9 KLLGTSGDGTLSVCNLR-KN--TVQTRSE-FSEEEL-TSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 9 ~l~~~~~d~~i~i~~~~-~~--~~~~~~~-~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
.++.|+.+|.|.-.-+. .+ ..+..+. ....+| ..+.++++...|+.++..+.+++
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45677888888654443 21 1111221 234567 48889998889999888876554
No 388
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=23.37 E-value=2.7e+02 Score=21.78 Aligned_cols=27 Identities=4% Similarity=0.135 Sum_probs=22.3
Q ss_pred ccceEEEEEEeCCCEEEEecCCCeEEE
Q 029743 37 EEELTSVVLMKNGRKVVCGSQSGTVLL 63 (188)
Q Consensus 37 ~~~v~~~~~~~~~~~l~~~~~d~~i~~ 63 (188)
..+|..+.++++...|++++..+.+++
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe
Confidence 457889999999999999988876665
No 389
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.42 E-value=3.1e+02 Score=22.21 Aligned_cols=54 Identities=9% Similarity=-0.052 Sum_probs=29.3
Q ss_pred Ceeecc-cCeEEEEeCCCcEEEEEcCCCceeeeecc-------cccceEEEEEEeC-CCEEEEe
Q 029743 1 MTFAAD-AMKLLGTSGDGTLSVCNLRKNTVQTRSEF-------SEEELTSVVLMKN-GRKVVCG 55 (188)
Q Consensus 1 l~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-------~~~~v~~~~~~~~-~~~l~~~ 55 (188)
|+++|. ...+++++..+.|...+ ..++.=..+.. ....+.++++.|. ...++.+
T Consensus 20 i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~ 82 (789)
T 1sqj_A 20 IVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA 82 (789)
T ss_dssp EEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred EEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEE
Confidence 356774 45666777667665554 33332222221 1246899999884 3444444
No 390
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=21.05 E-value=3e+02 Score=21.51 Aligned_cols=25 Identities=16% Similarity=0.129 Sum_probs=21.4
Q ss_pred ceeEEEeeCCCCEEEEEeCCCcEEE
Q 029743 125 PIESLALSHDRKFLGSISHDSMLKL 149 (188)
Q Consensus 125 ~v~~~~~~~~~~~l~~~~~d~~i~i 149 (188)
+|..|.++++...|..++..+.++|
T Consensus 471 pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 471 RIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred ceEEEEEcCCCCEEEEEecCeEEEe
Confidence 7889999999999998888877666
Done!