Your job contains 1 sequence.
>029744
MALCLSRSFSSYSQLHLSSLLSRCKPNFTSPNYPHKLPKSTNLPLVHHQNQICSSSYSMD
APPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQVPYWLTYDFPPEVREKLKHQWGG
DWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMSPEQILERAVDFKKPVYKEVF
TVFTPHLQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029744
(188 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075840 - symbol:NUDX26 "AT3G10620" species:37... 416 6.1e-39 1
TAIR|locus:2202487 - symbol:NUDX25 "AT1G30110" species:37... 280 1.9e-37 2
TAIR|locus:2164220 - symbol:NUDX27 "AT5G06340" species:37... 331 6.2e-30 1
TIGR_CMR|SPO_3585 - symbol:SPO_3585 "hydrolase, NUDIX fam... 204 8.8e-23 2
TIGR_CMR|CBU_1551 - symbol:CBU_1551 "MutT/nudix family pr... 173 3.1e-19 2
UNIPROTKB|Q47Y27 - symbol:rppH "RNA pyrophosphohydrolase"... 149 5.5e-18 2
TIGR_CMR|CPS_3625 - symbol:CPS_3625 "(di)nucleoside polyp... 149 5.5e-18 2
UNIPROTKB|Q9KU53 - symbol:rppH "RNA pyrophosphohydrolase"... 124 9.2e-15 2
TIGR_CMR|VC_0671 - symbol:VC_0671 "MutT/nudix family prot... 124 9.2e-15 2
TIGR_CMR|SO_1331 - symbol:SO_1331 "MutT/nudix family prot... 133 1.9e-14 2
UNIPROTKB|P0A776 - symbol:rppH species:83333 "Escherichia... 128 1.9e-14 2
TIGR_CMR|CJE_0684 - symbol:CJE_0684 "(di)nucleoside polyp... 123 1.0e-13 2
>TAIR|locus:2075840 [details] [associations]
symbol:NUDX26 "AT3G10620" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0034432 "bis(5'-adenosyl)-pentaphosphatase
activity" evidence=IDA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0006753 "nucleoside
phosphate metabolic process" evidence=IDA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 EMBL:AC011560 EMBL:AC013428 GO:GO:0004081
GO:GO:0034432 HOGENOM:HOG000066722 InterPro:IPR022927 EMBL:AF370187
EMBL:AY059145 IPI:IPI00542208 RefSeq:NP_187673.1 UniGene:At.19953
UniGene:At.69665 ProteinModelPortal:Q9CAF2 SMR:Q9CAF2 STRING:Q9CAF2
PaxDb:Q9CAF2 PRIDE:Q9CAF2 EnsemblPlants:AT3G10620.1 GeneID:820231
KEGG:ath:AT3G10620 TAIR:At3g10620 InParanoid:Q9CAF2 OMA:PEHVQIL
PhylomeDB:Q9CAF2 ProtClustDB:CLSN2913371 ArrayExpress:Q9CAF2
Genevestigator:Q9CAF2 Uniprot:Q9CAF2
Length = 216
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 69/94 (73%), Positives = 82/94 (87%)
Query: 95 MPQVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFG 154
+ + P+W+TYDFPP+VREKLK +WG DWKGQAQKWFLLKFTGK+EEINLLGD +EKPEFG
Sbjct: 123 LAEAPHWITYDFPPDVREKLKVRWGSDWKGQAQKWFLLKFTGKDEEINLLGDGTEKPEFG 182
Query: 155 EWKWMSPEQILERAVDFKKPVYKEVFTVFTPHLQ 188
EW W SP+Q++E AV+FKKPVYKEV + F HLQ
Sbjct: 183 EWSWTSPDQVVENAVEFKKPVYKEVMSAFASHLQ 216
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 55/135 (40%), Positives = 76/135 (56%)
Query: 32 NYPHKLPKSTNLPLVHH--QNQICSSSY----SMDAPPEGYRRNVGICLINSSKKIFAAS 85
NYP K K ++LP +H ++++ SSS SM++PPEGYRRNVG+CL+NSSKKIF AS
Sbjct: 23 NYPSKPIKFSSLPFLHRCRKSRVSSSSARCCSSMESPPEGYRRNVGVCLMNSSKKIFTAS 82
Query: 86 RLDIPDSWQMPQVPYWLTYDFPPEVREKLKHQWG---GDWKGQAQKWFLLKFTGK-EEEI 141
RLDIP +WQMPQ D V +LK + G + +A W F E++
Sbjct: 83 RLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVREKL 142
Query: 142 NLLGDKSEKPEFGEW 156
+ K + +W
Sbjct: 143 KVRWGSDWKGQAQKW 157
>TAIR|locus:2202487 [details] [associations]
symbol:NUDX25 "AT1G30110" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS;IDA] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015967 "diadenosine tetraphosphate
catabolic process" evidence=IDA] [GO:0006857 "oligopeptide
transport" evidence=RCA] [GO:0019243 "methylglyoxal catabolic
process to D-lactate" evidence=RCA] [GO:0006753 "nucleoside
phosphate metabolic process" evidence=IDA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IDA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 GO:GO:0004081 GO:GO:0015967 EMBL:AC074176
EMBL:AY087445 EMBL:BT025530 EMBL:AK229734 IPI:IPI00540816
PIR:B86425 RefSeq:NP_001185114.1 RefSeq:NP_174303.1
UniGene:At.43787 HSSP:P08337 ProteinModelPortal:Q9C6Z2 SMR:Q9C6Z2
PaxDb:Q9C6Z2 PRIDE:Q9C6Z2 EnsemblPlants:AT1G30110.1
EnsemblPlants:AT1G30110.2 GeneID:839890 KEGG:ath:AT1G30110
TAIR:At1g30110 HOGENOM:HOG000066722 InParanoid:Q9C6Z2 OMA:GNSEYDG
PhylomeDB:Q9C6Z2 ProtClustDB:CLSN2682056 Genevestigator:Q9C6Z2
InterPro:IPR022927 Uniprot:Q9C6Z2
Length = 175
Score = 280 (103.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 46/89 (51%), Positives = 65/89 (73%)
Query: 97 QVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEE--INLLGDKSEKPEFG 154
+VP WLTYDFPP V+ K+ WGG+W GQAQKW+L++ E+E INL ++++ EF
Sbjct: 70 EVPNWLTYDFPPAVKAKVNRLWGGEWHGQAQKWYLVRLRNDEDEKEINLANNEADS-EFA 128
Query: 155 EWKWMSPEQILERAVDFKKPVYKEVFTVF 183
EWKW PE+++E+AVD+K+P Y+EV F
Sbjct: 129 EWKWAKPEEVVEQAVDYKRPTYEEVIKTF 157
Score = 138 (53.6 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 59 MDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
M+ P GYR NVG+CLINS +F ASRL++P +WQMPQ
Sbjct: 1 MENLPPGYRPNVGVCLINSDNLVFVASRLNVPGAWQMPQ 39
>TAIR|locus:2164220 [details] [associations]
symbol:NUDX27 "AT5G06340" species:3702 "Arabidopsis
thaliana" [GO:0004081 "bis(5'-nucleosyl)-tetraphosphatase
(asymmetrical) activity" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0034432 "bis(5'-adenosyl)-pentaphosphatase activity"
evidence=IDA] [GO:0019243 "methylglyoxal catabolic process to
D-lactate" evidence=RCA] InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0046872
eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 EMBL:AB006700 GO:GO:0034432 HOGENOM:HOG000066722
InterPro:IPR022927 EMBL:AF372941 EMBL:AY113163 IPI:IPI00534536
RefSeq:NP_196252.1 UniGene:At.7280 ProteinModelPortal:Q9FNH4
SMR:Q9FNH4 STRING:Q9FNH4 EnsemblPlants:AT5G06340.1 GeneID:830522
KEGG:ath:AT5G06340 TAIR:At5g06340 InParanoid:Q9FNH4 OMA:GKVWVGR
PhylomeDB:Q9FNH4 ProtClustDB:CLSN2916502 Genevestigator:Q9FNH4
Uniprot:Q9FNH4
Length = 227
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 57/90 (63%), Positives = 69/90 (76%)
Query: 97 QVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEW 156
++P WLTYDFP EV++KL +W +KGQAQKWFL KFTGKEEEINLLGD + KPEF W
Sbjct: 124 EIPNWLTYDFPREVKDKLNRKWRTSYKGQAQKWFLFKFTGKEEEINLLGDGTAKPEFKVW 183
Query: 157 KWMSPEQILERAVDFKKPVYKEVFTVFTPH 186
WM PEQ++E AV FK+PVY+ V F P+
Sbjct: 184 SWMLPEQVIEHAVYFKRPVYEHVIKQFNPY 213
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 44/146 (30%), Positives = 75/146 (51%)
Query: 40 STNLPLVHHQNQICSSSYSMDAPPEGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQVP 99
S+ PLV + S + ++++PP GYR+NVGICL++ +KIF AS++ IPD+WQMPQ
Sbjct: 36 SSPKPLVVLSVALSSPARTVESPPVGYRKNVGICLVSPCRKIFTASKIHIPDTWQMPQGG 95
Query: 100 YWLTYDFPPEVREKLKHQWG---GDWKGQAQKWFLLKFTGK-EEEINLLGDKSEKPEFGE 155
D +L+ + G ++ + W F + ++++N S K + +
Sbjct: 96 ADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFPREVKDKLNRKWRTSYKGQAQK 155
Query: 156 W---KWMSPEQILERAVD-FKKPVYK 177
W K+ E+ + D KP +K
Sbjct: 156 WFLFKFTGKEEEINLLGDGTAKPEFK 181
>TIGR_CMR|SPO_3585 [details] [associations]
symbol:SPO_3585 "hydrolase, NUDIX family, NudH subfamily"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 HOGENOM:HOG000066722 OMA:GNSEYDG InterPro:IPR022927
KO:K08311 RefSeq:YP_168780.1 ProteinModelPortal:Q5LMH8
GeneID:3195400 KEGG:sil:SPO3585 PATRIC:23380647
ProtClustDB:CLSK759298 Uniprot:Q5LMH8
Length = 161
Score = 204 (76.9 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 34/87 (39%), Positives = 55/87 (63%)
Query: 101 WLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMS 160
WL YD P ++ ++ W G ++GQ QKW+L +F G++++I+L ++ PEF WKW
Sbjct: 80 WLPYDLPHDLVPRI---WKGRYRGQEQKWYLFRFLGRDDQIDL---ETGHPEFSRWKWQD 133
Query: 161 PEQILERAVDFKKPVYKEVFTVFTPHL 187
P++++ V FK+ VY+ V F PHL
Sbjct: 134 PDRLVAEIVPFKRDVYERVVAAFAPHL 160
Score = 74 (31.1 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 66 YRRNVGICLINSSKKIFAASRLDI-PDSWQMPQ 97
YR VG+ L+N +F R+D D+WQMPQ
Sbjct: 11 YRPCVGVVLMNGDGFVFVGQRMDQNTDAWQMPQ 43
>TIGR_CMR|CBU_1551 [details] [associations]
symbol:CBU_1551 "MutT/nudix family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893
PROSITE:PS51462 eggNOG:COG0494 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0016787 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
HOGENOM:HOG000066723 RefSeq:NP_820534.1 ProteinModelPortal:Q83BF8
GeneID:1209461 KEGG:cbu:CBU_1551 PATRIC:17931865
BioCyc:CBUR227377:GJ7S-1531-MONOMER Uniprot:Q83BF8
Length = 228
Score = 173 (66.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 34/88 (38%), Positives = 55/88 (62%)
Query: 101 WLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWMS 160
W++Y P + R +H+ G GQ QKWFLL+FTGK++ I+L D +PEF +W+W+
Sbjct: 145 WISYRLPKKFRRP-EHR-GPVCIGQRQKWFLLQFTGKDDAISL--DHCSQPEFDQWRWVD 200
Query: 161 PEQILERAVDFKKPVYKEVFTVFTPHLQ 188
++ V+FK+ VY++V T F ++
Sbjct: 201 YWYPVDHVVEFKRDVYQKVLTEFAEFIR 228
Score = 71 (30.1 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 65 GYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
G+R VG+ ++N ++ R+ PD+WQ PQ
Sbjct: 76 GFRLGVGMVIMNRQGELLWGRRVGNPDAWQFPQ 108
>UNIPROTKB|Q47Y27 [details] [associations]
symbol:rppH "RNA pyrophosphohydrolase" species:167879
"Colwellia psychrerythraea 34H" [GO:0015961 "diadenosine
polyphosphate catabolic process" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015961
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
RefSeq:YP_270293.1 ProteinModelPortal:Q47Y27 STRING:Q47Y27
GeneID:3522053 KEGG:cps:CPS_3625 PATRIC:21470177
HOGENOM:HOG000066723 BioCyc:CPSY167879:GI48-3647-MONOMER
Uniprot:Q47Y27
Length = 171
Score = 149 (57.5 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 100 YWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWM 159
+WL Y P + ++H GQ QKWFLLK T E ++LL S PEF +W+W+
Sbjct: 73 HWLKYKLP---KRYIRHDSKPVCIGQKQKWFLLKLTAAESSVDLL--HSSHPEFDDWRWV 127
Query: 160 SPEQILERAVDFKKPVYKEVFTVF 183
S + + V FK+ VY+ V F
Sbjct: 128 SYWYPVRQVVSFKRDVYRMVMKEF 151
Score = 83 (34.3 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
EGYR NVGI +IN ++F A R SWQ PQ
Sbjct: 5 EGYRANVGIVIINDMGQVFWARRYG-QHSWQYPQ 37
>TIGR_CMR|CPS_3625 [details] [associations]
symbol:CPS_3625 "(di)nucleoside polyphosphate hydrolase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0015961
"diadenosine polyphosphate catabolic process" evidence=ISS]
[GO:0016787 "hydrolase activity" evidence=ISS] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0015961
InterPro:IPR022927 OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714
RefSeq:YP_270293.1 ProteinModelPortal:Q47Y27 STRING:Q47Y27
GeneID:3522053 KEGG:cps:CPS_3625 PATRIC:21470177
HOGENOM:HOG000066723 BioCyc:CPSY167879:GI48-3647-MONOMER
Uniprot:Q47Y27
Length = 171
Score = 149 (57.5 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 100 YWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWM 159
+WL Y P + ++H GQ QKWFLLK T E ++LL S PEF +W+W+
Sbjct: 73 HWLKYKLP---KRYIRHDSKPVCIGQKQKWFLLKLTAAESSVDLL--HSSHPEFDDWRWV 127
Query: 160 SPEQILERAVDFKKPVYKEVFTVF 183
S + + V FK+ VY+ V F
Sbjct: 128 SYWYPVRQVVSFKRDVYRMVMKEF 151
Score = 83 (34.3 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
EGYR NVGI +IN ++F A R SWQ PQ
Sbjct: 5 EGYRANVGIVIINDMGQVFWARRYG-QHSWQYPQ 37
>UNIPROTKB|Q9KU53 [details] [associations]
symbol:rppH "RNA pyrophosphohydrolase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
GO:GO:0003824 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0494 GO:GO:0006281 Gene3D:3.90.79.10 InterPro:IPR020476
PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR022927
OMA:PEHVQIL KO:K08311 ProtClustDB:PRK00714 PIR:G82294
RefSeq:NP_230320.1 ProteinModelPortal:Q9KU53 DNASU:2615460
GeneID:2615460 KEGG:vch:VC0671 PATRIC:20080459 Uniprot:Q9KU53
Length = 172
Score = 124 (48.7 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 29/86 (33%), Positives = 41/86 (47%)
Query: 100 YWLTYDFPPEVREKLKHQWGGD--WKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWK 157
+WL Y P K +W GQ QKWFLL+ E +IN+ + PEF W+
Sbjct: 73 HWLRYKLP-----KRLVRWDSQPVCIGQKQKWFLLRLECDESKINM--QRGSSPEFDGWR 125
Query: 158 WMSPEQILERAVDFKKPVYKEVFTVF 183
W+S + + V FK+ VY+ F
Sbjct: 126 WVSYWYPVRQVVSFKRDVYRRAMKEF 151
Score = 77 (32.2 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
+GYR NVGI + N+ ++F A R SWQ PQ
Sbjct: 5 DGYRLNVGIVICNNHGQVFWAKRYG-QHSWQFPQ 37
>TIGR_CMR|VC_0671 [details] [associations]
symbol:VC_0671 "MutT/nudix family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 GO:GO:0003824
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0494
GO:GO:0006281 Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502
SUPFAM:SSF55811 GO:GO:0016787 InterPro:IPR022927 OMA:PEHVQIL
KO:K08311 ProtClustDB:PRK00714 PIR:G82294 RefSeq:NP_230320.1
ProteinModelPortal:Q9KU53 DNASU:2615460 GeneID:2615460
KEGG:vch:VC0671 PATRIC:20080459 Uniprot:Q9KU53
Length = 172
Score = 124 (48.7 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 29/86 (33%), Positives = 41/86 (47%)
Query: 100 YWLTYDFPPEVREKLKHQWGGD--WKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWK 157
+WL Y P K +W GQ QKWFLL+ E +IN+ + PEF W+
Sbjct: 73 HWLRYKLP-----KRLVRWDSQPVCIGQKQKWFLLRLECDESKINM--QRGSSPEFDGWR 125
Query: 158 WMSPEQILERAVDFKKPVYKEVFTVF 183
W+S + + V FK+ VY+ F
Sbjct: 126 WVSYWYPVRQVVSFKRDVYRRAMKEF 151
Score = 77 (32.2 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
+GYR NVGI + N+ ++F A R SWQ PQ
Sbjct: 5 DGYRLNVGIVICNNHGQVFWAKRYG-QHSWQFPQ 37
>TIGR_CMR|SO_1331 [details] [associations]
symbol:SO_1331 "MutT/nudix family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=ISS] HAMAP:MF_00298 InterPro:IPR000086
InterPro:IPR015797 InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893
PROSITE:PS51462 eggNOG:COG0494 Gene3D:3.90.79.10 InterPro:IPR020476
PRINTS:PR00502 SUPFAM:SSF55811 GO:GO:0016787 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR022927 OMA:PEHVQIL KO:K08311
ProtClustDB:PRK00714 HOGENOM:HOG000066723 RefSeq:NP_716951.1
ProteinModelPortal:Q8EH98 GeneID:1169152 KEGG:son:SO_1331
PATRIC:23522318 Uniprot:Q8EH98
Length = 174
Score = 133 (51.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 101 WLTYDFPPE-VREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEWKWM 159
WL Y P VR+ K GQ QKWFLL+ ++ INL S PEF +W+W+
Sbjct: 74 WLRYRLPKRLVRQDSKPVC----IGQKQKWFLLQLKSQDSAINL--SSSGHPEFDDWRWV 127
Query: 160 SPEQILERAVDFKKPVYKEVFTVF 183
S + + V FK+ VY++V F
Sbjct: 128 SYWYPVRQVVSFKRDVYRKVMKEF 151
Score = 65 (27.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
+G+R NVGI + N ++ A R SWQ PQ
Sbjct: 5 DGFRANVGIIICNRYGQVMWARRFG-QHSWQFPQ 37
>UNIPROTKB|P0A776 [details] [associations]
symbol:rppH species:83333 "Escherichia coli K-12"
[GO:0050779 "RNA destabilization" evidence=IMP] [GO:0034353 "RNA
pyrophosphohydrolase activity" evidence=IDA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IMP] HAMAP:MF_00298 InterPro:IPR000086 InterPro:IPR015797
InterPro:IPR020084 Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG0494 Gene3D:3.90.79.10
InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811 EMBL:U29581
GO:GO:0006402 InterPro:IPR022927 OMA:PEHVQIL KO:K08311
ProtClustDB:PRK00714 HOGENOM:HOG000066723 PIR:G65065
RefSeq:NP_417307.1 RefSeq:YP_491035.1 PDB:2KDV PDB:2KDW PDBsum:2KDV
PDBsum:2KDW ProteinModelPortal:P0A776 SMR:P0A776 DIP:DIP-47855N
IntAct:P0A776 PRIDE:P0A776 EnsemblBacteria:EBESCT00000000762
EnsemblBacteria:EBESCT00000018382 GeneID:12934210 GeneID:947300
KEGG:ecj:Y75_p2764 KEGG:eco:b2830 PATRIC:32121078 EchoBASE:EB2896
EcoGene:EG13091 BioCyc:EcoCyc:G7459-MONOMER
BioCyc:ECOL316407:JW2798-MONOMER BioCyc:MetaCyc:G7459-MONOMER
EvolutionaryTrace:P0A776 Genevestigator:P0A776 GO:GO:0034353
GO:GO:0050779 Uniprot:P0A776
Length = 176
Score = 128 (50.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 33/87 (37%), Positives = 43/87 (49%)
Query: 101 WLTYDFPPEVREKLKHQWGGDWK----GQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEW 156
WL Y P K +W D K GQ QKWFLL+ + EIN+ S PEF W
Sbjct: 74 WLRYKLP-----KRLVRW--DTKPVCIGQKQKWFLLQLVSGDAEINM--QTSSTPEFDGW 124
Query: 157 KWMSPEQILERAVDFKKPVYKEVFTVF 183
+W+S + + V FK+ VY+ V F
Sbjct: 125 RWVSYWYPVRQVVSFKRDVYRRVMKEF 151
Score = 70 (29.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 64 EGYRRNVGICLINSSKKIFAASRLDIPDSWQMPQ 97
+GYR NVGI + N ++ A R SWQ PQ
Sbjct: 5 DGYRPNVGIVICNRQGQVMWARRFG-QHSWQFPQ 37
>TIGR_CMR|CJE_0684 [details] [associations]
symbol:CJE_0684 "(di)nucleoside polyphosphate hydrolase"
species:195099 "Campylobacter jejuni RM1221" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=ISS] HAMAP:MF_00298
InterPro:IPR000086 InterPro:IPR015797 InterPro:IPR020084
Pfam:PF00293 PROSITE:PS00893 PROSITE:PS51462 eggNOG:COG0494
Gene3D:3.90.79.10 InterPro:IPR020476 PRINTS:PR00502 SUPFAM:SSF55811
GO:GO:0016787 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000066722 InterPro:IPR022927 OMA:PEHVQIL
RefSeq:YP_178696.1 ProteinModelPortal:Q5HVI9 STRING:Q5HVI9
GeneID:3231994 KEGG:cjr:CJE0684 PATRIC:20043096 KO:K08311
ProtClustDB:PRK00714 BioCyc:CJEJ195099:GJC0-701-MONOMER
Uniprot:Q5HVI9
Length = 156
Score = 123 (48.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 29/87 (33%), Positives = 50/87 (57%)
Query: 97 QVPYWLTYDFPPEVREKLKHQWGGDWKGQAQKWFLLKFTGKEEEINLLGDKSEKPEFGEW 156
+ P WL+YDFP ++ +K+ + GQ QK+FL++ IN+ ++ PEF ++
Sbjct: 73 EYPEWLSYDFPSKIVKKMY-----PYDGQIQKYFLVRLK-HGATINI---NTKHPEFDDY 123
Query: 157 KWMSPEQILERAVDFKKPVYKEVFTVF 183
+++S +QI E FKK +Y +V F
Sbjct: 124 QFVSVKQIFEMINHFKKNIYVKVIKYF 150
Score = 68 (29.0 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 64 EGYRRNVGICLINSSK----KIFAASRLDIPDSWQMPQ 97
+ YR NV +++SS KIF A R D+ + WQ PQ
Sbjct: 5 KNYRPNVAAIVLSSSYPFECKIFIAKRSDMDNIWQFPQ 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 188 168 0.00079 108 3 11 22 0.42 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 611 (65 KB)
Total size of DFA: 193 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.51u 0.12s 17.63t Elapsed: 00:00:01
Total cpu time: 17.51u 0.12s 17.63t Elapsed: 00:00:01
Start: Tue May 21 00:07:00 2013 End: Tue May 21 00:07:01 2013