Query 029745
Match_columns 188
No_of_seqs 105 out of 446
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 04:10:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029745.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029745hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kf6c_ f.21.2.2 (C:) Fumarate 28.1 86 0.0063 21.5 6.5 46 73-118 61-112 (130)
2 d2ftxb1 d.300.1.2 (B:155-213) 18.0 23 0.0016 21.3 1.3 8 56-63 46-53 (59)
3 d1fexa_ a.4.1.3 (A:) Rap1 {Hum 15.9 22 0.0016 21.2 0.9 52 2-56 4-58 (59)
4 d2axia1 a.42.1.1 (A:25-109) MD 15.6 17 0.0012 23.5 0.2 28 27-55 56-83 (85)
5 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 14.6 16 0.0012 22.8 -0.1 21 42-62 17-37 (75)
6 d1h9aa1 c.2.1.3 (A:1-181,A:413 13.8 75 0.0055 22.7 3.7 48 6-53 49-101 (195)
7 d1ttva_ a.42.1.1 (A:) MDM2 {Af 13.7 24 0.0018 23.6 0.7 28 27-55 64-91 (107)
8 d2q7ra1 f.56.1.1 (A:1-139) Ara 13.2 1.9E+02 0.014 19.4 11.3 38 45-82 47-84 (139)
9 d2a07f1 a.4.5.14 (F:503-584) F 11.4 46 0.0034 20.9 1.5 20 43-62 24-43 (82)
10 d1d5va_ a.4.5.14 (A:) Adipocyt 11.0 33 0.0024 22.2 0.7 21 42-62 25-45 (94)
No 1
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=28.06 E-value=86 Score=21.47 Aligned_cols=46 Identities=24% Similarity=0.405 Sum_probs=24.8
Q ss_pred HHHHhHHHHHHHHHHHHHHH-----HHHhc-cCCCeeecceechHHHHHHHH
Q 029745 73 SLIYHPVSIIVFLLTLVAWF-----FLYFA-RDDPLTVLGFQVDDRVVIGAL 118 (188)
Q Consensus 73 ~ll~~P~~Li~l~~~~~~~~-----~i~~~-~~~pl~i~g~~~~~~~~~~~l 118 (188)
..+.||+.++.=++..++.. ++... +.-|+.+.|+.++++.+..+.
T Consensus 61 ~flqnP~vv~lniiaLaa~L~Ha~TwF~l~Pk~m~i~v~~~~~~~~~iv~~~ 112 (130)
T d1kf6c_ 61 DFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSL 112 (130)
T ss_dssp HHHTSSHHHHHHHHHHHHHHHHHHHHHHHGGGGCCCBSSSSBCCSHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhcCccCChHHHHHHH
Confidence 34568877766555443211 11111 234677788888876554443
No 2
>d2ftxb1 d.300.1.2 (B:155-213) Kinetochore protein Spc24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=18.01 E-value=23 Score=21.32 Aligned_cols=8 Identities=13% Similarity=0.708 Sum_probs=6.8
Q ss_pred HHHHHHHH
Q 029745 56 THFRSNYA 63 (188)
Q Consensus 56 ~yF~~NY~ 63 (188)
.||.+||+
T Consensus 46 ~fF~tnYi 53 (59)
T d2ftxb1 46 DFYKTKYI 53 (59)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 68999996
No 3
>d1fexa_ a.4.1.3 (A:) Rap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.92 E-value=22 Score=21.18 Aligned_cols=52 Identities=25% Similarity=0.337 Sum_probs=37.0
Q ss_pred ccccCCchhhHHhHHHhhhh--ccCCCCChhhhhCcCCCCCC-CChhHHHHHHHHhHH
Q 029745 2 SFTAASDTGFLSRVKRTTQS--INATRRPWSDFLDLSAFNLP-LSLSDATTRITQNLT 56 (188)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~--~l~~~RPw~eF~~~~~fs~P-~s~~~~~~Ri~~Nl~ 56 (188)
-||+..|..++..+++.-.. ....-.=|.|+... ..| .+.+-|.+|-.++|+
T Consensus 4 ~fT~eeD~~l~~yv~~~~~~~~~~~Gn~iwk~l~~~---~~~~HtwQSwrdRY~K~L~ 58 (59)
T d1fexa_ 4 AFTDADDVAILTYVKENARSPSSVTGNALWKAMEKS---SLTQHSWQSLKDRYLKHLR 58 (59)
T ss_dssp CCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHS---CSSSCCSHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhccCcCCccHHHHHHHHHHh---cCCCCCHHHHHHHHHHHhc
Confidence 58999999999999876443 23333458888642 234 778999999988863
No 4
>d2axia1 a.42.1.1 (A:25-109) MDM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.58 E-value=17 Score=23.50 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=24.1
Q ss_pred CChhhhhCcCCCCCCCChhHHHHHHHHhH
Q 029745 27 RPWSDFLDLSAFNLPLSLSDATTRITQNL 55 (188)
Q Consensus 27 RPw~eF~~~~~fs~P~s~~~~~~Ri~~Nl 55 (188)
-|..|.|....||. ++..++..++++|+
T Consensus 56 D~LG~l~gv~sFsV-k~~r~l~~ml~rnL 83 (85)
T d2axia1 56 DLLGDLFGVPSFSV-KEHRKIYTMIYRNL 83 (85)
T ss_dssp SHHHHHHSSSEEET-TCHHHHHHHHHTTE
T ss_pred chHHhhcCCCceee-cCcHHHHHHHHhcc
Confidence 46788898999998 66899999999996
No 5
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.60 E-value=16 Score=22.81 Aligned_cols=21 Identities=24% Similarity=0.570 Sum_probs=13.7
Q ss_pred CChhHHHHHHHHhHHHHHHHH
Q 029745 42 LSLSDATTRITQNLTHFRSNY 62 (188)
Q Consensus 42 ~s~~~~~~Ri~~Nl~yF~~NY 62 (188)
-+++|..+-|.+|..||+.++
T Consensus 17 ltL~eIy~~i~~~fpy~r~~~ 37 (75)
T d1kq8a_ 17 LTLAEINEYLMGKFPFFRGSY 37 (75)
T ss_dssp BCHHHHHHHHHHHCTTGGGTC
T ss_pred ccHHHHHHHHHHhCcccccCC
Confidence 446677777777777776543
No 6
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=13.78 E-value=75 Score=22.73 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=36.7
Q ss_pred CCchhhHHhHHHhhhhccCCCCChhhhhCc-----CCCCCCCChhHHHHHHHH
Q 029745 6 ASDTGFLSRVKRTTQSINATRRPWSDFLDL-----SAFNLPLSLSDATTRITQ 53 (188)
Q Consensus 6 ~~~~~~~~~~~~~~~~~l~~~RPw~eF~~~-----~~fs~P~s~~~~~~Ri~~ 53 (188)
-++.+|.+.+++.++........|.+|+.. ..+..|.+..++.+++..
T Consensus 49 ~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~l~~ 101 (195)
T d1h9aa1 49 LNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEE 101 (195)
T ss_dssp CCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCTTCTTTHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEeeccHhhHHHHHHHHHH
Confidence 357788888888888766665668888853 577888888888888864
No 7
>d1ttva_ a.42.1.1 (A:) MDM2 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=13.75 E-value=24 Score=23.57 Aligned_cols=28 Identities=18% Similarity=0.385 Sum_probs=24.3
Q ss_pred CChhhhhCcCCCCCCCChhHHHHHHHHhH
Q 029745 27 RPWSDFLDLSAFNLPLSLSDATTRITQNL 55 (188)
Q Consensus 27 RPw~eF~~~~~fs~P~s~~~~~~Ri~~Nl 55 (188)
-|..|.|....||. ++..++..++.+|+
T Consensus 64 D~LG~llgv~sFsV-ke~r~l~~ml~rnL 91 (107)
T d1ttva_ 64 DPLGELFGVQEFSV-KEHRRIYAMISRNL 91 (107)
T ss_dssp CHHHHHHTCSCEET-TCHHHHHHHHHTTE
T ss_pred chHHhhcCCCceee-cCcHHHHHHHHhhh
Confidence 46888999999998 66899999999996
No 8
>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.16 E-value=1.9e+02 Score=19.38 Aligned_cols=38 Identities=13% Similarity=0.088 Sum_probs=25.2
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 029745 45 SDATTRITQNLTHFRSNYAVITLLALFLSLIYHPVSII 82 (188)
Q Consensus 45 ~~~~~Ri~~Nl~yF~~NY~li~~~~~~~~ll~~P~~Li 82 (188)
++-.+|..+--.-+-.|+-+..+.+++..+..+|...-
T Consensus 47 ~~~f~ra~RaH~N~~E~~p~~L~~l~~~~l~~~~~~a~ 84 (139)
T d2q7ra1 47 TLAFERVYTANQNCVDAYPTFLAVLWSAGLLCSQVPAA 84 (139)
T ss_dssp CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CHHHHHHHHHHhhhHhhHHHHHHHHHHHHhccCHHHHH
Confidence 34456666666667777777777777777767786543
No 9
>d2a07f1 a.4.5.14 (F:503-584) Forkhead box protein P2, FOXP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.42 E-value=46 Score=20.89 Aligned_cols=20 Identities=25% Similarity=0.423 Sum_probs=15.0
Q ss_pred ChhHHHHHHHHhHHHHHHHH
Q 029745 43 SLSDATTRITQNLTHFRSNY 62 (188)
Q Consensus 43 s~~~~~~Ri~~Nl~yF~~NY 62 (188)
+++|..+-|.+|..||+.++
T Consensus 24 tL~eIy~~i~~~fpyyr~~~ 43 (82)
T d2a07f1 24 TLNEIYSWFTRTFAYFRRNA 43 (82)
T ss_dssp CHHHHHHHHHHHHHHHCCCH
T ss_pred cHHHHHHHHHHhCcccccCC
Confidence 46777788888888887665
No 10
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.03 E-value=33 Score=22.16 Aligned_cols=21 Identities=19% Similarity=0.346 Sum_probs=17.0
Q ss_pred CChhHHHHHHHHhHHHHHHHH
Q 029745 42 LSLSDATTRITQNLTHFRSNY 62 (188)
Q Consensus 42 ~s~~~~~~Ri~~Nl~yF~~NY 62 (188)
-+++|..+-|..|..||+.++
T Consensus 25 ltL~eIY~~i~~~fpyfr~~~ 45 (94)
T d1d5va_ 25 ITLNGIYQFIMDRFPFYRENK 45 (94)
T ss_dssp BCHHHHHHHHHHHCTHHHHCC
T ss_pred ccHHHHHHHHHHHCCccCccc
Confidence 467888888999999988754
Done!