BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029747
(188 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224125410|ref|XP_002319579.1| predicted protein [Populus trichocarpa]
gi|222857955|gb|EEE95502.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 162/188 (86%), Positives = 171/188 (90%), Gaps = 1/188 (0%)
Query: 1 MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP 60
MLKQV GKVLN ANGG+K +RP LYVP + H GQ APRSFFGVEDFLDDDNSRP
Sbjct: 1 MLKQVFGKVLNKGFFANGGDK-LRPGLYVPNTGFHNGQAHCAPRSFFGVEDFLDDDNSRP 59
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
YTY+K KKSKN KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS
Sbjct: 60 YTYQKGKKSKNPNKHLSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 119
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KDIKAVL+SRSDIPACLA+G+ILA+RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG
Sbjct: 120 KDIKAVLKSRSDIPACLAVGQILADRAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 179
Query: 181 IDVKIYLD 188
IDVKIYLD
Sbjct: 180 IDVKIYLD 187
>gi|255588441|ref|XP_002534606.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223524931|gb|EEF27777.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 188
Score = 318 bits (816), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 158/189 (83%), Positives = 170/189 (89%), Gaps = 2/189 (1%)
Query: 1 MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP 60
MLKQV+GK+++ NGG+K +R LYVP S H GQV +PRSFFGVEDFLDDDNSRP
Sbjct: 1 MLKQVLGKIIHRGPFLNGGDK-LRLSLYVPGSCFHNGQVHYSPRSFFGVEDFLDDDNSRP 59
Query: 61 YTYKKEKKSKN-TTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 119
YTY+KEKKSKN KH+SFKQRT AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN
Sbjct: 60 YTYQKEKKSKNPNNKHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 119
Query: 120 SKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN 179
SKDIKA LRSRSDIPACLAIGRIL+ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN
Sbjct: 120 SKDIKAALRSRSDIPACLAIGRILSERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN 179
Query: 180 GIDVKIYLD 188
GID+K+YLD
Sbjct: 180 GIDIKVYLD 188
>gi|356508210|ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804348 [Glycine max]
Length = 187
Score = 315 bits (806), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%), Gaps = 1/188 (0%)
Query: 1 MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP 60
MLKQ +G++ + A G + + P++YVP+S H GQ APRSFFGVEDFLDDDNSRP
Sbjct: 1 MLKQAIGRIFRTGVYACEGNRVL-PWIYVPSSFFHHGQAHMAPRSFFGVEDFLDDDNSRP 59
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
YTY+K KKSKN KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS
Sbjct: 60 YTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 119
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KDIKAVLRSRSDIPAC+AIGRILAERA+EADVYT SYTPR+RDKFEGKIRAVVQSLIDNG
Sbjct: 120 KDIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNG 179
Query: 181 IDVKIYLD 188
ID+K+YLD
Sbjct: 180 IDIKVYLD 187
>gi|359487879|ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250278 [Vitis vinifera]
gi|298204993|emb|CBI34300.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/188 (82%), Positives = 167/188 (88%), Gaps = 1/188 (0%)
Query: 1 MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP 60
MLK + GK+ + ANG ++ RP LYVPTS H G+ APRSFFGVEDFLDDDNSRP
Sbjct: 1 MLKHLSGKLWIKGVWANGRDQ-FRPCLYVPTSGFHNGKAHLAPRSFFGVEDFLDDDNSRP 59
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
YTY+KEKKSKN KHISFKQRT AYMEPFTLDV ISKRFVSASLTHRVTSKQVAVAGTNS
Sbjct: 60 YTYQKEKKSKNPNKHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNS 119
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KDIKAVL+SRSDIPACLAIGRIL+ERAREADVYTASYTPR+RDKFEGKIRAVVQSLIDNG
Sbjct: 120 KDIKAVLKSRSDIPACLAIGRILSERAREADVYTASYTPRDRDKFEGKIRAVVQSLIDNG 179
Query: 181 IDVKIYLD 188
IDVK+YLD
Sbjct: 180 IDVKVYLD 187
>gi|356517682|ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805468 [Glycine max]
Length = 202
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%), Gaps = 1/188 (0%)
Query: 1 MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP 60
MLKQV+G++ + A G + + P++YVP+ H GQ APRSFFGVEDFLDDDNSRP
Sbjct: 16 MLKQVIGRICRTDVYACEGNRVL-PWIYVPSCFFHHGQAHMAPRSFFGVEDFLDDDNSRP 74
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
YTY+K KKSKN KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS
Sbjct: 75 YTYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 134
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KDIKAVLRSRSDIPAC+AIGRILAERA+EADVYT SYTPR+RDKFEGKIRAVVQSLIDNG
Sbjct: 135 KDIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNG 194
Query: 181 IDVKIYLD 188
ID+K+YLD
Sbjct: 195 IDIKVYLD 202
>gi|238478415|ref|NP_001154322.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
gi|332190238|gb|AEE28359.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
Length = 234
Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 162/189 (85%), Gaps = 1/189 (0%)
Query: 1 MLKQVVGKV-LNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSR 59
MLKQVV K + + + +RPF+ + H G+ + APRSFFGVED++DDD SR
Sbjct: 46 MLKQVVAKYSIGKAAIYGSNREKLRPFMCQTSCRFHNGRTVFAPRSFFGVEDYVDDDTSR 105
Query: 60 PYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 119
PYTY+KEKKSKN KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTN
Sbjct: 106 PYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTN 165
Query: 120 SKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN 179
SKD+KAVLRSR DIPAC++IGRIL+ERA+EADVYTASYTPR++DKFEGKIRAVVQSLIDN
Sbjct: 166 SKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDN 225
Query: 180 GIDVKIYLD 188
GIDVKIYLD
Sbjct: 226 GIDVKIYLD 234
>gi|30680844|ref|NP_849617.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
gi|26453256|dbj|BAC43701.1| unknown protein [Arabidopsis thaliana]
gi|28372952|gb|AAO39958.1| At1g08850 [Arabidopsis thaliana]
gi|332190237|gb|AEE28358.1| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
Length = 189
Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/189 (75%), Positives = 162/189 (85%), Gaps = 1/189 (0%)
Query: 1 MLKQVVGKV-LNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSR 59
MLKQVV K + + + +RPF+ + H G+ + APRSFFGVED++DDD SR
Sbjct: 1 MLKQVVAKYSIGKAAIYGSNREKLRPFMCQTSCRFHNGRTVFAPRSFFGVEDYVDDDTSR 60
Query: 60 PYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 119
PYTY+KEKKSKN KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTN
Sbjct: 61 PYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTN 120
Query: 120 SKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN 179
SKD+KAVLRSR DIPAC++IGRIL+ERA+EADVYTASYTPR++DKFEGKIRAVVQSLIDN
Sbjct: 121 SKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDN 180
Query: 180 GIDVKIYLD 188
GIDVKIYLD
Sbjct: 181 GIDVKIYLD 189
>gi|449442869|ref|XP_004139203.1| PREDICTED: uncharacterized protein LOC101215592 [Cucumis sativus]
gi|449525565|ref|XP_004169787.1| PREDICTED: uncharacterized LOC101215592 [Cucumis sativus]
Length = 187
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 166/188 (88%), Gaps = 1/188 (0%)
Query: 1 MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP 60
MLK +G + + + A + RP+L VPTS H+G+V APRSFFG+EDFLDDDNSRP
Sbjct: 1 MLKHFLGNMRKHVVCACEVNR-FRPYLLVPTSDFHKGEVHCAPRSFFGIEDFLDDDNSRP 59
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
YTY+K KKSKN KHISFKQRT+AYMEPFTLDVFISKRFVSASLTHRVT KQVAVAGTNS
Sbjct: 60 YTYQKSKKSKNPKKHISFKQRTLAYMEPFTLDVFISKRFVSASLTHRVTCKQVAVAGTNS 119
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KDIKAVL+SRSDIPACLA+GRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG
Sbjct: 120 KDIKAVLQSRSDIPACLAVGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 179
Query: 181 IDVKIYLD 188
IDVKIYL+
Sbjct: 180 IDVKIYLE 187
>gi|297843672|ref|XP_002889717.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
gi|297335559|gb|EFH65976.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
Length = 189
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/189 (74%), Positives = 161/189 (85%), Gaps = 1/189 (0%)
Query: 1 MLKQVVGKV-LNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSR 59
MLKQVV K + + + +RPFL + H + + APRSFFGVED++DDD SR
Sbjct: 1 MLKQVVTKYSIGKAAIYGSNREKLRPFLCQTSCRFHNARTVFAPRSFFGVEDYVDDDTSR 60
Query: 60 PYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 119
PYTY+KEKKSKN KH+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTN
Sbjct: 61 PYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTN 120
Query: 120 SKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN 179
SKD+KAVLRSR DIPAC++IGRIL+ERA+EADVYTASYTPR+++KFEGKIRAVVQSLIDN
Sbjct: 121 SKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQEKFEGKIRAVVQSLIDN 180
Query: 180 GIDVKIYLD 188
GIDVKIYLD
Sbjct: 181 GIDVKIYLD 189
>gi|242040201|ref|XP_002467495.1| hypothetical protein SORBIDRAFT_01g029100 [Sorghum bicolor]
gi|241921349|gb|EER94493.1| hypothetical protein SORBIDRAFT_01g029100 [Sorghum bicolor]
Length = 187
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 149/164 (90%)
Query: 25 PFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVA 84
P L S H GQVL++ RSFFGVEDF+D+DNSRPYTYKKEK+SKN KHISFKQRT+A
Sbjct: 24 PALLTCWSQFHSGQVLSSSRSFFGVEDFVDEDNSRPYTYKKEKRSKNPHKHISFKQRTIA 83
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
YMEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKAVL+SRSDIPACLA+GR LA
Sbjct: 84 YMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKAVLKSRSDIPACLAVGRFLA 143
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
ERA+EADV+T +YTPRERDKFEGKIRAVVQSLIDNGI+VK+YLD
Sbjct: 144 ERAKEADVFTCTYTPRERDKFEGKIRAVVQSLIDNGINVKLYLD 187
>gi|388494676|gb|AFK35404.1| unknown [Lotus japonicus]
Length = 148
Score = 284 bits (726), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/147 (92%), Positives = 144/147 (97%)
Query: 42 APRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVS 101
APRSFFGVEDFLDDDNSRPYTY+K KKSKN KH+SFKQRTVA+MEPFTLDVFISKRFVS
Sbjct: 2 APRSFFGVEDFLDDDNSRPYTYQKGKKSKNPNKHVSFKQRTVAFMEPFTLDVFISKRFVS 61
Query: 102 ASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRE 161
AS+THRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC+AIGRILAERAREADVYTASYTPR+
Sbjct: 62 ASVTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILAERAREADVYTASYTPRD 121
Query: 162 RDKFEGKIRAVVQSLIDNGIDVKIYLD 188
RDKFEGKIRAVVQSLIDNGID+K+YLD
Sbjct: 122 RDKFEGKIRAVVQSLIDNGIDIKVYLD 148
>gi|115483410|ref|NP_001065375.1| Os10g0559900 [Oryza sativa Japonica Group]
gi|18873848|gb|AAL79794.1|AC079874_17 hypothetical protein [Oryza sativa Japonica Group]
gi|31433497|gb|AAP55002.1| expressed protein [Oryza sativa Japonica Group]
gi|113639907|dbj|BAF27212.1| Os10g0559900 [Oryza sativa Japonica Group]
gi|125532939|gb|EAY79504.1| hypothetical protein OsI_34632 [Oryza sativa Indica Group]
gi|125575679|gb|EAZ16963.1| hypothetical protein OsJ_32448 [Oryza sativa Japonica Group]
gi|215687201|dbj|BAG91766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 187
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/162 (81%), Positives = 148/162 (91%)
Query: 27 LYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYM 86
L+ S H GQ+L++ RSFFGVEDF+D+DNS+PYTYKKEK+SKN KHISFKQRT+AYM
Sbjct: 26 LHACWSRFHSGQMLSSSRSFFGVEDFMDEDNSKPYTYKKEKRSKNPHKHISFKQRTIAYM 85
Query: 87 EPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAER 146
EPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKA L+SRSDIPACLA+GR LAER
Sbjct: 86 EPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIKAALKSRSDIPACLAVGRFLAER 145
Query: 147 AREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
A+EADVYT +YTPRERDKFEGKIRAVVQSLIDNGI+VK+YLD
Sbjct: 146 AKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKVYLD 187
>gi|116791242|gb|ABK25907.1| unknown [Picea sitchensis]
Length = 186
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/155 (85%), Positives = 146/155 (94%)
Query: 34 LHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDV 93
+H G+ L PRSFFGVEDF+DDDNS+PYTY KEKKSKN KH+SFKQRT+AYM+PFTLDV
Sbjct: 32 IHSGKELCGPRSFFGVEDFVDDDNSKPYTYMKEKKSKNPHKHVSFKQRTIAYMQPFTLDV 91
Query: 94 FISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVY 153
FISKRFVSAS+THRVTSKQVAVAGTNSKDIKA LRS+SDIPACLAIGRILAER+READVY
Sbjct: 92 FISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAIGRILAERSREADVY 151
Query: 154 TASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
TA YTPRERDKFEGKIRAVVQSLIDNGID+K+YL+
Sbjct: 152 TAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN 186
>gi|226494019|ref|NP_001143121.1| uncharacterized protein LOC100275599 [Zea mays]
gi|194703688|gb|ACF85928.1| unknown [Zea mays]
gi|195614668|gb|ACG29164.1| hypothetical protein [Zea mays]
gi|195616076|gb|ACG29868.1| hypothetical protein [Zea mays]
gi|195646646|gb|ACG42791.1| hypothetical protein [Zea mays]
gi|414867690|tpg|DAA46247.1| TPA: hypothetical protein ZEAMMB73_679563 [Zea mays]
gi|414867691|tpg|DAA46248.1| TPA: hypothetical protein ZEAMMB73_679563 [Zea mays]
Length = 187
Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/164 (80%), Positives = 147/164 (89%)
Query: 25 PFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVA 84
P + S H GQV ++ RSFFGVEDF+D+DNSRPYTYKKEK+SKN KHISFKQRT+A
Sbjct: 24 PAVLTCWSQFHSGQVWSSSRSFFGVEDFVDEDNSRPYTYKKEKRSKNPHKHISFKQRTIA 83
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+MEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKA LRSRSD+PACLA+GR LA
Sbjct: 84 HMEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKAALRSRSDVPACLAVGRFLA 143
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
ERA+EADVYT +YTPRERDKFEGKIRAVVQSLIDNGI+VK+YLD
Sbjct: 144 ERAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKLYLD 187
>gi|357147393|ref|XP_003574328.1| PREDICTED: uncharacterized protein LOC100845820 [Brachypodium
distachyon]
Length = 187
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/162 (79%), Positives = 144/162 (88%)
Query: 27 LYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYM 86
LY +S H GQ L + RSFFGVEDF+D+DNSRPYTYKKEK+SKN KHISFKQRT+A+M
Sbjct: 26 LYTCSSRFHGGQALCSSRSFFGVEDFMDEDNSRPYTYKKEKRSKNPHKHISFKQRTIAHM 85
Query: 87 EPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAER 146
EPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKD+KA L SRSD+PACL++GR LAER
Sbjct: 86 EPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDVKAALASRSDVPACLSVGRFLAER 145
Query: 147 AREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
A+EADVY +YTPRERD+FEGKIRAVVQSLIDNGI VK+YLD
Sbjct: 146 AKEADVYACTYTPRERDRFEGKIRAVVQSLIDNGIHVKVYLD 187
>gi|326489354|dbj|BAK01660.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501304|dbj|BAJ98883.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518152|dbj|BAK07328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 187
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/162 (78%), Positives = 144/162 (88%)
Query: 27 LYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYM 86
LY +S H GQ L + RSFFGVEDF+D+DNS+PYTYKKEK+SKN KHISFKQRT+A+M
Sbjct: 26 LYACSSRFHSGQALRSSRSFFGVEDFMDEDNSKPYTYKKEKRSKNPHKHISFKQRTIAHM 85
Query: 87 EPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAER 146
EPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKD+KA L SRSD+PACL++GR LAER
Sbjct: 86 EPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDVKAALTSRSDVPACLSVGRFLAER 145
Query: 147 AREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
A+EADVY +YTPRERD+FEGKIRAVVQSLIDNGI VK+YLD
Sbjct: 146 AKEADVYACTYTPRERDRFEGKIRAVVQSLIDNGIHVKLYLD 187
>gi|223947491|gb|ACN27829.1| unknown [Zea mays]
Length = 173
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/163 (79%), Positives = 144/163 (88%)
Query: 26 FLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAY 85
F + S V ++ RSFFGVEDF+D+DNSRPYTYKKEK+SKN KHISFKQRT+A+
Sbjct: 11 FWHGELSWFFNLMVWSSSRSFFGVEDFVDEDNSRPYTYKKEKRSKNPHKHISFKQRTIAH 70
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
MEPFTLDVFISKRFVSASLTHR T +QVAVAGTNSKDIKA LRSRSD+PACLA+GR LAE
Sbjct: 71 MEPFTLDVFISKRFVSASLTHRSTCRQVAVAGTNSKDIKAALRSRSDVPACLAVGRFLAE 130
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
RA+EADVYT +YTPRERDKFEGKIRAVVQSLIDNGI+VK+YLD
Sbjct: 131 RAKEADVYTCTYTPRERDKFEGKIRAVVQSLIDNGINVKLYLD 173
>gi|255642189|gb|ACU21359.1| unknown [Glycine max]
Length = 103
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/103 (94%), Positives = 101/103 (98%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC+AIGRILAE
Sbjct: 1 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACIAIGRILAE 60
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
RA+EADVYT SYTPR RDKFEGKIRAVVQSLIDNGID+K+YLD
Sbjct: 61 RAKEADVYTGSYTPRGRDKFEGKIRAVVQSLIDNGIDIKVYLD 103
>gi|148907754|gb|ABR17003.1| unknown [Picea sitchensis]
Length = 583
Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 89/125 (71%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
+ ++E+ + K +SFK+ T AYM PF LD+F+SK V A + HRVT VAVA + S
Sbjct: 207 FWLREEEALERKKKLLSFKEMTDAYMHPFCLDIFVSKSSVCACIVHRVTCNVVAVAQSIS 266
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KD+K+ L SR D+ AC A+G ILA+RA D+YTA YTPR+ DK EGK+ V+QS+I++G
Sbjct: 267 KDMKSDLISRKDLTACAAVGGILAQRAIADDIYTAVYTPRKGDKLEGKVMVVLQSIINHG 326
Query: 181 IDVKI 185
+D+K+
Sbjct: 327 VDIKV 331
>gi|225432670|ref|XP_002278526.1| PREDICTED: uncharacterized protein LOC100249372 [Vitis vinifera]
gi|297737055|emb|CBI26256.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 80/111 (72%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y EPF LD+FISK V A + HRVTSK VAVA + SKD+K L S ++ AC
Sbjct: 219 TFNQLTAPYHEPFCLDIFISKGSVRACIIHRVTSKVVAVAHSISKDMKFDLTSTRNVTAC 278
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+GRILA+RA D++ YTPR+ DK EGK++ V+QS+IDNG++VK+ L
Sbjct: 279 AAVGRILAQRALADDIHDTVYTPRKGDKLEGKLQIVLQSIIDNGVNVKVKL 329
>gi|449447649|ref|XP_004141580.1| PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus]
gi|449481530|ref|XP_004156210.1| PREDICTED: uncharacterized LOC101213193 [Cucumis sativus]
Length = 334
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 82/122 (67%), Gaps = 4/122 (3%)
Query: 66 EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 125
EKK + T F Q T Y EPF LD+FISK V A + HRVTSK VAVA + SKD+K
Sbjct: 202 EKKLRTPT----FNQLTSPYHEPFCLDIFISKASVRACIIHRVTSKVVAVAHSISKDMKF 257
Query: 126 VLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKI 185
L SR D AC A+G +LA+RA D++ YTPR+ ++ EGK++ V+QS+IDNGI+V +
Sbjct: 258 DLTSRKDSSACAAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQIVLQSVIDNGINVTV 317
Query: 186 YL 187
+
Sbjct: 318 KI 319
>gi|357470487|ref|XP_003605528.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355506583|gb|AES87725.1| 50S ribosomal protein L18 [Medicago truncatula]
Length = 199
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 83/121 (68%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
+T + +++ S+K+RT YM PF LD+F SK+FV A +THR TSK + VA TN+
Sbjct: 76 WTRRSRGEAEKKPSRKSWKRRTDMYMRPFLLDIFFSKKFVHAKVTHRGTSKVICVATTNA 135
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KD++ L S D AC IGR++AER++EADVY +Y PR++++ EG++ ++ ++ +NG
Sbjct: 136 KDLRNSLPSLIDPEACRVIGRLIAERSKEADVYAMAYEPRKKERIEGRLGIIIDTVKENG 195
Query: 181 I 181
I
Sbjct: 196 I 196
>gi|302786168|ref|XP_002974855.1| hypothetical protein SELMODRAFT_59025 [Selaginella moellendorffii]
gi|300157750|gb|EFJ24375.1| hypothetical protein SELMODRAFT_59025 [Selaginella moellendorffii]
Length = 107
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
SF+QR+ YM PF LDV +S ++V+A++ HR + VA TNSKD++A+L SRSD+ AC
Sbjct: 1 SFRQRSDKYMRPFCLDVHLSSKYVNATIMHRSRGRVVAAVSTNSKDMRAMLPSRSDLSAC 60
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G LA+RA+EAD Y+ Y PR+ ++ EGK+ AVV+++ + GI V
Sbjct: 61 RIVGETLADRAKEADCYSVIYIPRKLERLEGKLAAVVEAVANCGISV 107
>gi|326527543|dbj|BAK08046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 327
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 77/111 (69%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y PF LD+ +SK V A HRVTS+ V+VA + SKD+K L SR I AC
Sbjct: 194 TFNQMTDPYHHPFCLDIHVSKGSVRACFVHRVTSRVVSVAHSISKDMKFDLGSRKGIKAC 253
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
+A+G +LA+RA E D++ A YTPR+ DK EGKI V++ +I+NG+DVK+ L
Sbjct: 254 VAVGALLAKRAIEDDIHNAIYTPRKGDKIEGKIEVVLRGIIENGVDVKVKL 304
>gi|302822798|ref|XP_002993055.1| hypothetical protein SELMODRAFT_136453 [Selaginella moellendorffii]
gi|300139147|gb|EFJ05894.1| hypothetical protein SELMODRAFT_136453 [Selaginella moellendorffii]
Length = 132
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 78/107 (72%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+K+ T YM PF++DV+IS R+V+A + HRVTSK VAVA TN+KD++A L S + AC
Sbjct: 25 SWKRATEKYMRPFSIDVYISSRYVNAKIVHRVTSKTVAVATTNAKDLRASLPSLTSASAC 84
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
IG+++AERA EADVY +Y PR+ ++ + K+ V+ ++ +NG+ V
Sbjct: 85 EVIGKLIAERAMEADVYAVTYVPRKNERLQEKLEIVLNTVKENGVAV 131
>gi|224145139|ref|XP_002325540.1| predicted protein [Populus trichocarpa]
gi|222862415|gb|EEE99921.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 77/105 (73%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF L+VF S+RF+ A + HR TSK V+VA TN+KD++ L S +D AC
Sbjct: 21 SWKQRTDMYMRPFLLNVFFSRRFIQAKVMHRGTSKVVSVATTNAKDLRHSLPSLTDHNAC 80
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+G+++AER++EADVY SY PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 81 RIVGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGI 125
>gi|302780293|ref|XP_002971921.1| hypothetical protein SELMODRAFT_96295 [Selaginella moellendorffii]
gi|300160220|gb|EFJ26838.1| hypothetical protein SELMODRAFT_96295 [Selaginella moellendorffii]
Length = 132
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 78/107 (72%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+K+ T YM PF++DV+IS R+V+A + HRVTSK VAVA TN+KD++A L S + AC
Sbjct: 25 SWKRATEKYMRPFSIDVYISARYVNAKIVHRVTSKTVAVATTNAKDLRASLPSLTSASAC 84
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
IG+++AERA EADVY +Y PR+ ++ + K+ V+ ++ +NG+ V
Sbjct: 85 EVIGKLIAERAMEADVYAVTYVPRKNERLQEKLEIVLNTVKENGVAV 131
>gi|302760693|ref|XP_002963769.1| hypothetical protein SELMODRAFT_68956 [Selaginella moellendorffii]
gi|300169037|gb|EFJ35640.1| hypothetical protein SELMODRAFT_68956 [Selaginella moellendorffii]
Length = 107
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 76/107 (71%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
SF+QR+ YM PF LDV +S ++V+A++ HR + VA TNSKD++A L SRSD+ AC
Sbjct: 1 SFRQRSDKYMRPFCLDVHLSSKYVNATIMHRSRGRVVAAVSTNSKDMRATLPSRSDLSAC 60
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G LA+RA+EAD Y+ Y PR+ ++ EGK+ AVV+++ + GI V
Sbjct: 61 RIVGETLADRAKEADCYSVIYIPRKLERLEGKLAAVVEAVANCGISV 107
>gi|297744840|emb|CBI38108.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 76/105 (72%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQ+T YM PF L+VF SKRF+ A + HR TSK ++VA TNSKD++ L S +D AC
Sbjct: 90 SWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNAC 149
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IG+++AER+ EADV+ SY PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 150 RVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGI 194
>gi|224135983|ref|XP_002327352.1| predicted protein [Populus trichocarpa]
gi|222835722|gb|EEE74157.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 78/105 (74%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM+PF L+VF S++F+ A + HR TSK ++VA TN+KD++ L S +D AC
Sbjct: 21 SWKQRTEMYMKPFLLNVFFSRKFIQAKVMHRGTSKVISVATTNAKDLRHSLPSLTDHNAC 80
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+G+++AER++EADVY SY PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 81 RIVGKLIAERSKEADVYAMSYEPRKDERIEGKLGIVIDTIKENGI 125
>gi|225454046|ref|XP_002263231.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
Length = 183
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 76/105 (72%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQ+T YM PF L+VF SKRF+ A + HR TSK ++VA TNSKD++ L S +D AC
Sbjct: 76 SWKQKTDMYMRPFLLNVFFSKRFIHAKVMHRPTSKVISVATTNSKDLRNTLSSLTDHNAC 135
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IG+++AER+ EADV+ SY PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 136 RVIGKLIAERSMEADVFAMSYEPRKDERIEGKLGIVLDTIKENGI 180
>gi|449465411|ref|XP_004150421.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 190
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Query: 65 KEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
+E+ +K K S+KQRT YM PF L+VF SK+F+ A + HR TSK ++VA TN+KD++
Sbjct: 71 REEAAKRPNKK-SWKQRTDMYMRPFLLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLR 129
Query: 125 AVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L S +D AC IG+++AER++EADVY SY PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 130 NSLPSLTDHNACRVIGKLIAERSKEADVYAISYEPRKDERIEGKLGIVIDTIKENGI 186
>gi|388509934|gb|AFK43033.1| unknown [Lotus japonicus]
Length = 202
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 77/105 (73%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF L+VF SKRF+ A + HR TSK ++VA TNSKD++ L S +D AC
Sbjct: 95 SWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNSKDLRNSLPSLTDHDAC 154
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+GR++A+R++EADVY +Y PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 155 RVVGRLIAQRSKEADVYALAYEPRKDERIEGKLGIVLDTIKENGI 199
>gi|41052808|dbj|BAD07676.1| unknown protein [Oryza sativa Japonica Group]
gi|125540732|gb|EAY87127.1| hypothetical protein OsI_08528 [Oryza sativa Indica Group]
gi|125583307|gb|EAZ24238.1| hypothetical protein OsJ_07988 [Oryza sativa Japonica Group]
gi|215704232|dbj|BAG93072.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 181
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 82/121 (67%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
+T + K+++ S+KQRT YM PF L+VF SKRFV A + HR TSK ++VA TN+
Sbjct: 58 WTRRSRKEAEERPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVVHRGTSKVISVASTNA 117
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KD++ L S D AC IGR++AER+ +ADV+ SY P++ ++ EGK+ V+ ++ ++G
Sbjct: 118 KDLRTTLPSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHG 177
Query: 181 I 181
I
Sbjct: 178 I 178
>gi|168054579|ref|XP_001779708.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668906|gb|EDQ55504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 75/103 (72%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
RT + PF+LDVF+S +++ AS+ HRVTSK VAV TN+K+ + L+S D AC +G
Sbjct: 16 RTEKCLRPFSLDVFLSGKYIHASVMHRVTSKVVAVCSTNAKEFRNNLKSYKDFTACKVVG 75
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
LA+RA+EADV+T Y PR+ +KFEG++ AVV ++ D+GI+V
Sbjct: 76 ETLAQRAKEADVFTVVYEPRKGEKFEGRLAAVVHTIEDSGINV 118
>gi|449531806|ref|XP_004172876.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L18-like
[Cucumis sativus]
Length = 190
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Query: 65 KEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
+E+ +K K S+KQRT YM PF L+VF SK+F+ A + HR TSK ++VA TN+KD++
Sbjct: 71 REEAAKRPNKK-SWKQRTDMYMRPFXLNVFFSKKFIHAKVMHRGTSKVISVATTNAKDLR 129
Query: 125 AVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L S +D AC IG+++AER+++ADVY SY PR+ ++ EGK+ V+ ++ +NGI
Sbjct: 130 NSLPSLTDHNACRVIGKLIAERSKDADVYAISYEPRKDERIEGKLGIVIDTIKENGI 186
>gi|224099809|ref|XP_002311628.1| predicted protein [Populus trichocarpa]
gi|222851448|gb|EEE88995.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 77/111 (69%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y EPF LD++ISK V A + HRVTSK VAVA + SKD K L S + AC
Sbjct: 222 TFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAVAHSISKDFKFDLASTKNATAC 281
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G ILA+RA D++ YTPR+ ++ EGK++ V+Q++IDNGI+VK+ L
Sbjct: 282 AAVGGILAQRALADDIHDVVYTPRKGERLEGKLQIVLQAIIDNGINVKVKL 332
>gi|226502296|ref|NP_001150881.1| structural constituent of ribosome [Zea mays]
gi|195642592|gb|ACG40764.1| structural constituent of ribosome [Zea mays]
gi|413938308|gb|AFW72859.1| structural constituent of ribosome [Zea mays]
Length = 189
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 81/121 (66%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
+T + +++ S+KQRT YM PF L+VF SKRFV A + HR TSK +AVA TNS
Sbjct: 66 WTRRSRGEAEQRPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNS 125
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KD++ L S D AC IGR++AER+ +ADV+ +Y P++ ++ EGK+ V+ ++ ++G
Sbjct: 126 KDLRLTLPSLVDDNACRTIGRLIAERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEHG 185
Query: 181 I 181
I
Sbjct: 186 I 186
>gi|255552181|ref|XP_002517135.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223543770|gb|EEF45298.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 140
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 77/111 (69%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y EPF LD++ISK V A + HRVTSK VAVA + SKD+K L S ++ AC
Sbjct: 16 TFNQLTGPYHEPFCLDIYISKASVRACVIHRVTSKVVAVAHSISKDLKFDLSSTRNVAAC 75
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
+G +LA+RA D++ YT R+ +K EGK++ V+QS++DNGI+VK+ L
Sbjct: 76 ATVGAVLAQRALADDIHDVIYTQRKGEKLEGKLQIVLQSIVDNGINVKVKL 126
>gi|356540329|ref|XP_003538642.1| PREDICTED: uncharacterized protein LOC100802391 [Glycine max]
Length = 329
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y EPF LD+FISK V A + HRVTSK VAVA + SKD K L S + C
Sbjct: 208 TFNQLTGPYHEPFCLDIFISKASVRACVVHRVTSKVVAVAHSISKDFKFDLASTKNKTTC 267
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G ILA+RA D++ YTPR+ ++ EGK++ V+QS+IDNGI+VK+ +
Sbjct: 268 AAVGAILAQRALADDIHDIVYTPRKGERVEGKLQIVLQSIIDNGINVKVKI 318
>gi|224111280|ref|XP_002332948.1| predicted protein [Populus trichocarpa]
gi|222834260|gb|EEE72737.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y EPF LD++ISK V A + HR TSK VAVA + SKD K L S + AC
Sbjct: 1 TFNQLTGPYHEPFCLDIYISKASVRACVIHRETSKVVAVAHSISKDFKFDLASTKNAAAC 60
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G ILA+RA D++ YTPR+ ++ EGK++ V+Q++IDNGI+VK+ L
Sbjct: 61 AAVGGILAQRALADDIHDVVYTPRKGERLEGKLQIVLQAIIDNGINVKVKL 111
>gi|115482592|ref|NP_001064889.1| Os10g0484400 [Oryza sativa Japonica Group]
gi|78708825|gb|ABB47800.1| expressed protein [Oryza sativa Japonica Group]
gi|113639498|dbj|BAF26803.1| Os10g0484400 [Oryza sativa Japonica Group]
gi|215741465|dbj|BAG97960.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222613031|gb|EEE51163.1| hypothetical protein OsJ_31935 [Oryza sativa Japonica Group]
Length = 323
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y PF LD+ ++K V A HRV+S+ V VA + SKD+K + SR + AC
Sbjct: 195 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKAC 254
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G +LA+RA E D++ A YTPR+ D+ EGKI V++++IDNG++VK+ L
Sbjct: 255 AAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGVEVKVKL 305
>gi|356526443|ref|XP_003531827.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
Length = 197
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 78/121 (64%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
+T + ++ S+KQRT YM PF L+VF SKRF+ A + HR TSK + VA TN+
Sbjct: 74 WTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNA 133
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KD++ L S D AC +G ++AER+ EADVY +Y PR+ ++ EG++ V+ ++ +NG
Sbjct: 134 KDLRNSLPSLIDHNACRVVGNLIAERSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENG 193
Query: 181 I 181
I
Sbjct: 194 I 194
>gi|218184773|gb|EEC67200.1| hypothetical protein OsI_34077 [Oryza sativa Indica Group]
Length = 323
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y PF LD+ ++K V A HRV+S+ V VA + SKD+K + SR + AC
Sbjct: 195 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKAC 254
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G +LA+RA E D++ A YTPR+ D+ EGKI V++++IDNG++VK+ L
Sbjct: 255 AAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGVEVKVKL 305
>gi|18402538|ref|NP_566655.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
gi|9293979|dbj|BAB01882.1| unnamed protein product [Arabidopsis thaliana]
gi|21554527|gb|AAM63600.1| unknown [Arabidopsis thaliana]
gi|24030337|gb|AAN41334.1| unknown protein [Arabidopsis thaliana]
gi|222423792|dbj|BAH19862.1| AT3G20230 [Arabidopsis thaliana]
gi|332642829|gb|AEE76350.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
Length = 187
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
Query: 30 PTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYMEPF 89
P S+ G V+++P + F+ +T + ++ S+KQRT YM PF
Sbjct: 38 PKLSIEIGSVISSP--IVKKDSFVQA----AWTRRSRGEAAKRPNRKSWKQRTDMYMRPF 91
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
L+VF S++F+ A + HR TSK ++VA TN++DI+ + S D AC IG+++AER+ E
Sbjct: 92 LLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSME 151
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
ADVY SY PR+ ++ EGK+ V+ ++ ++GI
Sbjct: 152 ADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
>gi|297834952|ref|XP_002885358.1| 50S ribosomal protein L18 family [Arabidopsis lyrata subsp. lyrata]
gi|297331198|gb|EFH61617.1| 50S ribosomal protein L18 family [Arabidopsis lyrata subsp. lyrata]
Length = 187
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
Query: 30 PTSSLHQGQVLNAPRSFFGVEDFLDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYMEPF 89
P S+ G V+++P + F+ +T + ++ S+KQRT YM PF
Sbjct: 38 PKLSIEIGSVISSP--IVKKDSFVQAA----WTRRSRGEAAKRPNRKSWKQRTDMYMRPF 91
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
L+VF S++F+ A + HR TSK ++VA TN++DI+ + S D AC IG+++AER+ E
Sbjct: 92 LLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEACRLIGKLIAERSME 151
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
ADVY SY PR+ ++ EGK+ V+ ++ ++GI
Sbjct: 152 ADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
>gi|22094358|gb|AAM91885.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 345
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y PF LD+ ++K V A HRV+S+ V VA + SKD+K + SR + AC
Sbjct: 195 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKGMKAC 254
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G +LA+RA E D++ A YTPR+ D+ EGKI V++++IDNG++VK+ L
Sbjct: 255 AAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEVVLRAIIDNGVEVKVKL 305
>gi|357137082|ref|XP_003570130.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
Length = 185
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 74/105 (70%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF L+VF SKRFV A + HR TSK +AVA TN+KD++ L S D AC
Sbjct: 78 SWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNAKDLRNTLPSLVDENAC 137
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IGR++AER+ +ADV+ +Y P++ ++ EGK+ V+ ++ + GI
Sbjct: 138 RTIGRLIAERSMDADVFAMAYEPKKNERVEGKLGIVIDTIKEYGI 182
>gi|242082265|ref|XP_002445901.1| hypothetical protein SORBIDRAFT_07g027720 [Sorghum bicolor]
gi|241942251|gb|EES15396.1| hypothetical protein SORBIDRAFT_07g027720 [Sorghum bicolor]
Length = 345
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSD--IP 134
+F Q T Y PF LD+ ++K V A HRVTS+ VAVA + SKD+K L S+ +
Sbjct: 194 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVTSRVVAVAHSISKDMKFDLGSKKGKGMK 253
Query: 135 ACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
AC A+G +LA+RA E D++ A YTPR+ D+ EGKI+ V+ ++I+NG+DVK+ L
Sbjct: 254 ACAAVGALLAKRALEDDIHNALYTPRKGDRIEGKIKVVLHAIIENGVDVKVKL 306
>gi|358249214|ref|NP_001240012.1| uncharacterized protein LOC100820550 [Glycine max]
gi|255640812|gb|ACU20689.1| unknown [Glycine max]
Length = 197
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 78/121 (64%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120
+T + ++ S+KQRT YM PF L+VF SKRF+ A + HR TSK + VA TN+
Sbjct: 74 WTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNA 133
Query: 121 KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
KD++ L S D AC +G ++A+R+ EADVY +Y PR+ ++ EG++ V+ ++ +NG
Sbjct: 134 KDLRNSLPSLIDHNACRVVGNLIAQRSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENG 193
Query: 181 I 181
I
Sbjct: 194 I 194
>gi|168036088|ref|XP_001770540.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678248|gb|EDQ64709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 196
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 75/107 (70%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT Y +PF LDVFIS ++V A + HRVTS V+VA TN+KD++ L S SD AC
Sbjct: 89 SWKQRTEKYFKPFILDVFISSKYVHAKVMHRVTSSVVSVATTNAKDLRLSLPSLSDANAC 148
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
IG+++AER+ E D+Y ++ R+ +K EGK+ V+ S I++G+ +
Sbjct: 149 RLIGQLIAERSIEQDIYAVAFDLRKNEKLEGKLAIVIDSAIEHGLTL 195
>gi|357480871|ref|XP_003610721.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355512056|gb|AES93679.1| 50S ribosomal protein L18 [Medicago truncatula]
Length = 404
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 75/109 (68%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T Y EPF LD++ISK V A + HRVTSK V VA + SKD+K L S + C
Sbjct: 232 TFNQLTGPYHEPFCLDIYISKASVRACIVHRVTSKVVVVAHSISKDLKFDLTSTKNKTTC 291
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKI 185
A+G+ILA+RA D++ YTPR+ ++ EGK++ V+ S+ID+GI+VK+
Sbjct: 292 AAVGKILAQRALADDIHDIIYTPRKGERVEGKLQIVLNSIIDSGINVKL 340
>gi|226502000|ref|NP_001144270.1| uncharacterized protein LOC100277147 [Zea mays]
gi|195639396|gb|ACG39166.1| hypothetical protein [Zea mays]
Length = 333
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSD--IP 134
+F Q T Y PF LD+ ++K V A HRVTS+ V VA + SKD+K L S+ +
Sbjct: 195 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVTSRVVTVAHSISKDMKFDLGSKKGKGMK 254
Query: 135 ACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
AC+A+G +LA+RA E D++ A YTPR+ D+ EGKI AV++++ +NG+DVK+ L
Sbjct: 255 ACVAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEAVLRAITENGVDVKVKL 307
>gi|449433155|ref|XP_004134363.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 221
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 70/105 (66%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF LDV+ S+RF+ A + HR TSK V+ A TN KD++ L S +D AC
Sbjct: 114 SWKQRTDMYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNAC 173
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IG ++AER +EADV+ SY P ++ + K+ V+ ++ +NGI
Sbjct: 174 RIIGNLIAERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGI 218
>gi|449515551|ref|XP_004164812.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 150
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 70/105 (66%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF LDV+ S+RF+ A + HR TSK V+ A TN KD++ L S +D AC
Sbjct: 43 SWKQRTDMYMRPFVLDVYFSRRFIHAKVMHRGTSKVVSAASTNCKDLRYSLPSPTDDNAC 102
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IG ++AER +EADV+ SY P ++ + K+ V+ ++ +NGI
Sbjct: 103 RIIGNLIAERCKEADVFAMSYDPPSMERIQDKVGIVIDTIKENGI 147
>gi|223948281|gb|ACN28224.1| unknown [Zea mays]
gi|413950944|gb|AFW83593.1| hypothetical protein ZEAMMB73_340872 [Zea mays]
Length = 333
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSD--IP 134
+F Q T Y PF LD+ ++K V A HRVTS+ V VA + SKD+K L S+ +
Sbjct: 195 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVTSRVVTVAHSISKDMKFDLGSKKGKGMK 254
Query: 135 ACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
AC+A+G +LA+RA E D++ A YTPR+ D+ EGKI AV+ ++ +NG+DVK+ L
Sbjct: 255 ACVAVGALLAKRAIEDDIHNAIYTPRKGDRIEGKIEAVLCAITENGVDVKVKL 307
>gi|413938307|gb|AFW72858.1| hypothetical protein ZEAMMB73_879546 [Zea mays]
Length = 101
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 69/97 (71%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
YM PF L+VF SKRFV A + HR TSK +AVA TNSKD++ L S D AC IGR++A
Sbjct: 2 YMRPFLLNVFFSKRFVHAKVMHRGTSKVIAVATTNSKDLRLTLPSLVDDNACRTIGRLIA 61
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
ER+ +ADV+ +Y P++ ++ EGK+ V+ ++ ++GI
Sbjct: 62 ERSMDADVFAMAYEPKKNERIEGKLGIVIDTIKEHGI 98
>gi|255585804|ref|XP_002533581.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223526540|gb|EEF28799.1| structural constituent of ribosome, putative [Ricinus communis]
Length = 186
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 63/85 (74%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF L+VF SKRF+ A + HR TSK ++VA TN+KD++ L S +D AC
Sbjct: 87 SWKQRTDMYMRPFLLNVFFSKRFIHAKVMHRGTSKVISVATTNAKDLRNTLPSLTDHDAC 146
Query: 137 LAIGRILAERAREADVYTASYTPRE 161
+GR++AER++EADVY +Y PR+
Sbjct: 147 RVVGRLIAERSKEADVYAIAYEPRK 171
>gi|15229493|ref|NP_188884.1| 50S ribosomal protein L18-like protein [Arabidopsis thaliana]
gi|11994277|dbj|BAB01460.1| unnamed protein product [Arabidopsis thaliana]
gi|60547769|gb|AAX23848.1| hypothetical protein At3g22450 [Arabidopsis thaliana]
gi|71905479|gb|AAZ52717.1| expressed protein [Arabidopsis thaliana]
gi|71905481|gb|AAZ52718.1| expressed protein [Arabidopsis thaliana]
gi|332643120|gb|AEE76641.1| 50S ribosomal protein L18-like protein [Arabidopsis thaliana]
Length = 311
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 78/114 (68%)
Query: 70 KNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRS 129
K + +F Q T + PF LD++ISK V A + HRVTSK V VA + SKD+K L S
Sbjct: 179 KKRERTFTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGS 238
Query: 130 RSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
R ++ AC A+G +LA+R+ E D++ YTPR+ DK EGK++ V+Q+LIDNG++V
Sbjct: 239 RRNVAACAAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNV 292
>gi|297830972|ref|XP_002883368.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
gi|297329208|gb|EFH59627.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 71/106 (66%)
Query: 76 ISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 135
+F Q T + PF LD++ISK V A + HRVTSK V VA + SKD+K L S + A
Sbjct: 185 FTFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSTRNAAA 244
Query: 136 CLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
C A+G +LA+R E D++ YTPR+ DK EGK++ V+Q+LIDNG+
Sbjct: 245 CAAVGAVLAQRCLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGV 290
>gi|302785772|ref|XP_002974657.1| hypothetical protein SELMODRAFT_101829 [Selaginella moellendorffii]
gi|300157552|gb|EFJ24177.1| hypothetical protein SELMODRAFT_101829 [Selaginella moellendorffii]
Length = 127
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 76 ISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 135
+SF++ + YM P+ L + KR + A + HR VA GTNS+D+KA L ++D+ A
Sbjct: 1 MSFRRESDKYMRPYFLIIDFPKRSIHAKIVHRAQHTTVASVGTNSRDLKAFLPDKTDLAA 60
Query: 136 CLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
C G +LA RA+EAD Y ++ + EG++ V+ SL+D GI V
Sbjct: 61 CRFTGELLARRAKEADCYAVAFNG---SRVEGRLAVVIDSLVDCGISV 105
>gi|302759893|ref|XP_002963369.1| hypothetical protein SELMODRAFT_80094 [Selaginella moellendorffii]
gi|300168637|gb|EFJ35240.1| hypothetical protein SELMODRAFT_80094 [Selaginella moellendorffii]
Length = 129
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 76 ISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 135
+SF++ + YM P+ L + KR + A + H VA GTNS+D+KA L ++D+ A
Sbjct: 1 MSFRRESDKYMRPYFLIIDFPKRSIHAKIVHSAQHTTVASVGTNSRDLKAFLPDKTDLAA 60
Query: 136 CLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
C G +LA RA+EAD Y +++ + EG++ V+ SL+D GI V
Sbjct: 61 CRFTGELLARRAKEADCYAVAFSG---SRVEGRLAVVIDSLVDCGISV 105
>gi|168021383|ref|XP_001763221.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685704|gb|EDQ72098.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 103
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+ Y++P+ L + S ++V + + H+ TS V A + KD++ L + D+ A I I
Sbjct: 2 IKYLKPYELKLHFSNKYVRSMVVHKPTSHTVVAATSQEKDLREQLPATGDVAAAAQIASI 61
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
LA R + DV +Y ++ +++ GKI+A + SL +NGI +
Sbjct: 62 LASRLKVKDVPAVTYELKKGERYHGKIKAFLDSLRENGIQL 102
>gi|413923510|gb|AFW63442.1| hypothetical protein ZEAMMB73_021028 [Zea mays]
Length = 177
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 61 YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN- 119
+T + +++ S+KQ P F SKRFV A + HR TSK +AVA TN
Sbjct: 67 WTRRSRGETEQRPNRKSWKQ--TCTCAPSCSIFFPSKRFVHAKVMHRGTSKVIAVATTND 124
Query: 120 SKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFE 166
+KD + L S D AC GR++AER+ +ADV+ +Y P++ + E
Sbjct: 125 AKDFRLTLPSLVDDNACRTTGRLIAERSMDADVFALAYEPKKNESRE 171
>gi|384251778|gb|EIE25255.1| translational machinery component [Coccomyxa subellipsoidea C-169]
Length = 107
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%)
Query: 87 EPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAER 146
+PF L +F+S ++ A + R +A A T KD++ L S SD PA +G++LAER
Sbjct: 10 KPFVLKLFLSNKYTYAQVIRRADGNVLAAASTIEKDLRKDLPSTSDKPASALVGKLLAER 69
Query: 147 AREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
A++A + + + K+ GK++ ++ S+ + G+ +
Sbjct: 70 AQQAGISAVHWERKYGQKYHGKVKELLASMQEAGLPL 106
>gi|351720997|ref|NP_001236427.1| uncharacterized protein LOC100526952 [Glycine max]
gi|255631236|gb|ACU15985.1| unknown [Glycine max]
Length = 114
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 57/99 (57%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + ++VSA + H T+ V+ A + K +++ L + D+ A IG+ILA
Sbjct: 15 FLKPYVLKMHFTNKYVSAQVIHTPTATVVSSASSQEKALRSSLETSRDVAAAAKIGKILA 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER D+ S + K+ GK++AV+ S+ + G+ +
Sbjct: 75 ERLLLKDIPAVSVHLKREQKYHGKVKAVIDSIREAGVKL 113
>gi|357444863|ref|XP_003592709.1| 50S ribosomal protein L18 [Medicago truncatula]
gi|355481757|gb|AES62960.1| 50S ribosomal protein L18 [Medicago truncatula]
Length = 114
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 55/97 (56%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
Y++P+ L + + ++VSA + H T+ + A + K +++ L + D+ A IG++LA
Sbjct: 15 YLKPYVLKMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETTRDVAAAAKIGKLLA 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
ER D+ S + ++ GK++AV+ SL + G+
Sbjct: 75 ERLSLKDIPAVSVHLKREQRYHGKVKAVIDSLREAGV 111
>gi|357129656|ref|XP_003566477.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
Length = 114
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R V+Y++P+ L + S ++VSA + H T+ A + K +++ L S D+ A IG
Sbjct: 11 RIVSYLKPYLLRMHFSNKYVSAQVIHTPTATVACSASSQEKLLRSDLESTRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + S + K+ GK+RAV+ S+ + G+ +
Sbjct: 71 KLLGERMLLKGIPAVSIHMKREQKYHGKVRAVIDSVREAGVKL 113
>gi|388498984|gb|AFK37558.1| unknown [Lotus japonicus]
Length = 114
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + ++VSA + H T+ + A + K +++ L ++ D+ A IG+ILA
Sbjct: 15 FLKPYVLRMHFTNKYVSAQVIHTPTATVASSASSQEKALRSSLETKRDVAAAAKIGKILA 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER ++ S + K+ GK++AV+ SL + G+ +
Sbjct: 75 ERLLLKEIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
>gi|225450681|ref|XP_002283176.1| PREDICTED: 50S ribosomal protein L18 [Vitis vinifera]
gi|296089732|emb|CBI39551.3| unnamed protein product [Vitis vinifera]
Length = 114
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + +FV+A + H T+ + A + K +++ + S D+ A IG+IL
Sbjct: 15 FLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMESTRDVAAAAMIGKILG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER D+ + + K+ GK++AV+ SL + GI +
Sbjct: 75 ERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSLREVGIKL 113
>gi|224096087|ref|XP_002310534.1| predicted protein [Populus trichocarpa]
gi|222853437|gb|EEE90984.1| predicted protein [Populus trichocarpa]
Length = 114
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R +++P+ L + + ++V+A +TH T+ + A + K +++ + + D+ A IG
Sbjct: 11 RVTQFLKPYVLKMHFTNQYVNAQVTHSPTATVASAASSQEKALRSTMENTRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+IL ER D+ + K+ GK++AV+ SL + GI +
Sbjct: 71 KILGERLLLKDIPAVTVFLNRNQKYHGKVKAVIDSLREVGIKI 113
>gi|356551492|ref|XP_003544108.1| PREDICTED: 50S ribosomal protein L18-like [Glycine max]
Length = 114
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + ++VSA + H T+ + A + K +++ L + D+ A IG+ILA
Sbjct: 15 FLKPYVLKMNFTNKYVSAQVIHSPTATVASSASSQEKALRSSLETSRDVAAAAKIGKILA 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER ++ S + K+ GK++AV+ SL + G+ +
Sbjct: 75 ERLLLKNIPAVSVHLKREQKYHGKVKAVIDSLREAGVKL 113
>gi|125549734|gb|EAY95556.1| hypothetical protein OsI_17403 [Oryza sativa Indica Group]
Length = 114
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R +++P+ L + S ++VSA + H T+ A + K ++ + S D+ A IG
Sbjct: 11 RITRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + + S + K+ GK+RAV+ S+ + G+ +
Sbjct: 71 KLLGERLLQKGIPAVSIHMKREQKYHGKVRAVIDSVREAGVKL 113
>gi|147798815|emb|CAN74240.1| hypothetical protein VITISV_043330 [Vitis vinifera]
Length = 241
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R + +++P+ L + + +FV+A + H T+ + A + K +++ + S D+ A IG
Sbjct: 11 RIMKFLKPYVLKMHFTNKFVNAQVIHSPTATVASAASSQEKTLRSTMESTRDVAAAAMIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSL 176
+IL ER D+ + + K+ GK++AV+ SL
Sbjct: 71 KILGERLLLQDIPAVTVFLKRDQKYHGKVKAVIDSL 106
>gi|449453185|ref|XP_004144339.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
gi|449480883|ref|XP_004156021.1| PREDICTED: 50S ribosomal protein L18-like [Cucumis sativus]
Length = 114
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R Y++P+ L + + +FVSA + H T+ + A + K +++ + S D+ A IG
Sbjct: 11 RLTQYLKPYVLKMHFTNKFVSAQVIHSETAIVASAASSQEKALQSSMESTRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + + ++ GK++AV+ S+ + GI +
Sbjct: 71 KLLGERLLLKGIPAVCVHLKREQRYHGKVKAVIDSVREAGIKL 113
>gi|255542770|ref|XP_002512448.1| 50S ribosomal protein L18, putative [Ricinus communis]
gi|223548409|gb|EEF49900.1| 50S ribosomal protein L18, putative [Ricinus communis]
Length = 115
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%)
Query: 76 ISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 135
+ + R +++P+ L + + +FVSA + H ++ A + K ++ + + D+ A
Sbjct: 7 VKWPPRVADFLKPYVLKMHFTNKFVSAQVIHSPSATVACSASSQEKALRPSMENTRDVAA 66
Query: 136 CLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
IG+IL ER + S + K+ GK++AVV S+ ++G+ +
Sbjct: 67 AAKIGKILGERLLVKGIPAISVFLKREQKYHGKVKAVVDSVRESGVKL 114
>gi|326527977|dbj|BAJ89040.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R V +++P+ L + S ++V+A + H T+ A + K ++ L S D+ A IG
Sbjct: 11 RIVGFLKPYLLRMHFSNKYVTAQVIHTPTATVACSASSQEKLLRPNLESTRDVSAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + S + K+ GK++AV+ S+ + G+ +
Sbjct: 71 KLLGERLLIKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKL 113
>gi|222618129|gb|EEE54261.1| hypothetical protein OsJ_01153 [Oryza sativa Japonica Group]
Length = 150
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R +++P+ L + S ++VSA + H T+ A + K ++ + S D+ A IG
Sbjct: 47 RITRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 106
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + + + K+ GK+RAV+ S+ + G+ +
Sbjct: 107 KLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGVKL 149
>gi|115435738|ref|NP_001042627.1| Os01g0256600 [Oryza sativa Japonica Group]
gi|108792645|dbj|BAE95806.1| unknown protein [Oryza sativa Japonica Group]
gi|113532158|dbj|BAF04541.1| Os01g0256600 [Oryza sativa Japonica Group]
gi|215686647|dbj|BAG88900.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708823|dbj|BAG94092.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 114
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R +++P+ L + S ++VSA + H T+ A + K ++ + S D+ A IG
Sbjct: 11 RITRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + + + K+ GK+RAV+ S+ + G+ +
Sbjct: 71 KLLGERLLQKGIPAVCIHMKREQKYHGKVRAVIDSVREAGVKL 113
>gi|242072312|ref|XP_002446092.1| hypothetical protein SORBIDRAFT_06g001630 [Sorghum bicolor]
gi|241937275|gb|EES10420.1| hypothetical protein SORBIDRAFT_06g001630 [Sorghum bicolor]
Length = 114
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R +++P+ L + + ++VSA + H TS A + K ++ + S D+ A + IG
Sbjct: 11 RVTRFLKPYLLRMHFTNKYVSAQVIHTPTSTVACSASSQEKLLRPNMESTRDVAAAVKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + S + K+ GK++AV+ S+ + G+ +
Sbjct: 71 KLLGERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKL 113
>gi|242038475|ref|XP_002466632.1| hypothetical protein SORBIDRAFT_01g011330 [Sorghum bicolor]
gi|241920486|gb|EER93630.1| hypothetical protein SORBIDRAFT_01g011330 [Sorghum bicolor]
Length = 114
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + FVSA + H T+ A + K ++ + S D+ A IG++L
Sbjct: 15 FLKPYILKMHFTNNFVSAQVIHTPTATVTCSASSQEKLLRPSMESTRDVAAAAKIGKLLG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER + S + K+ GK++AV+ SL D G+ +
Sbjct: 75 ERLLFKGIPAVSVSISRDQKYHGKVKAVIDSLRDAGVKL 113
>gi|15241056|ref|NP_198134.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
gi|21554086|gb|AAM63167.1| unknown [Arabidopsis thaliana]
gi|88011066|gb|ABD38897.1| At5g27820 [Arabidopsis thaliana]
gi|332006345|gb|AED93728.1| Ribosomal L18p/L5e family protein [Arabidopsis thaliana]
Length = 114
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R Y++P+ L + + +FV A + H T+ A + K ++ + D+ A IG
Sbjct: 11 RLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+IL ER D+ + ++ ++ GK++AV+ S+ + G+ +
Sbjct: 71 KILGERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGVKL 113
>gi|255070051|ref|XP_002507107.1| ribosomal protein L18, chloroplast precursor [Micromonas sp.
RCC299]
gi|226522382|gb|ACO68365.1| ribosomal protein L18, chloroplast precursor [Micromonas sp.
RCC299]
Length = 110
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S R V A + +V S VA A T K ++A L + + A ++GR++AER+ A
Sbjct: 17 LLVFFSNRAVYAQVLRKVDSHIVAAASTTEKVLRATLTNLGNEDAAASVGRVVAERSIAA 76
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
++ + + +F GK+R ++ ++ D G+ +K
Sbjct: 77 GIHVVHFNRPKGKRFHGKLRTLIDNMRDAGLPLK 110
>gi|297812923|ref|XP_002874345.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320182|gb|EFH50604.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 114
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R Y++P+ L + + +FV A + H T+ A + K ++ + D+ A IG
Sbjct: 11 RLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+IL ER D+ + + ++ GK++AV+ S+ + G+ +
Sbjct: 71 KILGERLLMKDIPAVTIQMKREQRYHGKVKAVIDSVREAGVKL 113
>gi|226496289|ref|NP_001152098.1| 50S ribosomal protein L18 [Zea mays]
gi|226510381|ref|NP_001150322.1| 50S ribosomal protein L18 [Zea mays]
gi|195608440|gb|ACG26050.1| 50S ribosomal protein L18 [Zea mays]
gi|195609138|gb|ACG26399.1| 50S ribosomal protein L18 [Zea mays]
gi|195638354|gb|ACG38645.1| 50S ribosomal protein L18 [Zea mays]
gi|195652601|gb|ACG45768.1| 50S ribosomal protein L18 [Zea mays]
gi|223943857|gb|ACN26012.1| unknown [Zea mays]
gi|414588054|tpg|DAA38625.1| TPA: 50S ribosomal protein L18 isoform 1 [Zea mays]
gi|414588055|tpg|DAA38626.1| TPA: 50S ribosomal protein L18 isoform 2 [Zea mays]
Length = 114
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R +++P+ L + S ++VSA + H T+ A + K ++ + S D+ A IG
Sbjct: 11 RVTRFLKPYLLRMHFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
++L ER + S + K+ GK++AV+ S+ + G+ +
Sbjct: 71 KLLGERLLLKGIPAVSIHMKREQKYHGKVKAVIDSVREAGVKL 113
>gi|226507386|ref|NP_001151709.1| LOC100285345 [Zea mays]
gi|195649205|gb|ACG44070.1| structural constituent of ribosome [Zea mays]
Length = 114
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + FVSA + H T+ A + K ++ + S D+ A IG++L
Sbjct: 15 FLKPYILKMHFTNSFVSAQVIHTPTATVACSASSQEKLLRPSMESTRDVAAAAKIGKLLG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKI 185
ER + S + K+ GK++AV+ SL G+ VK+
Sbjct: 75 ERLLFKGIPAVSVSMSRDQKYHGKVKAVIDSL--TGVGVKL 113
>gi|195607984|gb|ACG25822.1| structural constituent of ribosome [Zea mays]
gi|223949055|gb|ACN28611.1| unknown [Zea mays]
gi|414872230|tpg|DAA50787.1| TPA: structural constituent of ribosome isoform 1 [Zea mays]
gi|414872231|tpg|DAA50788.1| TPA: structural constituent of ribosome isoform 2 [Zea mays]
Length = 114
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + FVSA + H T+ A + K ++ + S D+ A IG++L
Sbjct: 15 FLKPYILKMHFTNSFVSAQVIHTPTATVACSASSQEKLLRPSMESTRDVAAAAKIGKLLG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKI 185
ER + S + K+ GK++AV+ SL G+ VK+
Sbjct: 75 ERLLFKGIPAVSVSMSRDQKYHGKVKAVIDSL--RGVGVKL 113
>gi|115448011|ref|NP_001047785.1| Os02g0689700 [Oryza sativa Japonica Group]
gi|113537316|dbj|BAF09699.1| Os02g0689700, partial [Oryza sativa Japonica Group]
Length = 58
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 127 LRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L S D AC IGR++AER+ +ADV+ SY P++ ++ EGK+ V+ ++ ++GI
Sbjct: 1 LPSLVDDNACRTIGRLIAERSMDADVFAMSYEPKKNERIEGKLGIVIDTIKEHGI 55
>gi|303274572|ref|XP_003056604.1| ribosomal protein L18 [Micromonas pusilla CCMP1545]
gi|226462688|gb|EEH59980.1| ribosomal protein L18 [Micromonas pusilla CCMP1545]
Length = 121
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L + S FV A + R + VA A T K +K L+ +D A IG+++AER+
Sbjct: 15 LKIVFSNSFVYAQVLRRTDNHIVATASTVEKALKVTLKHTADKTAASVIGKVIAERSNAV 74
Query: 151 DVYTASYTPR-ERDKFEGKIRAVVQSLIDNGIDV 183
+V A Y P+ E +F GK++ +V +L +G+ +
Sbjct: 75 NV-NAVYFPKPEGKRFHGKLKVLVDTLRGSGLSL 107
>gi|357118555|ref|XP_003561018.1| PREDICTED: 50S ribosomal protein L18-like [Brachypodium distachyon]
Length = 114
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + FVSA + H ++ A + K ++ + S D+ A IG++L
Sbjct: 15 FLKPYVLKMHFTSNFVSAQVIHTPSATIACAASSQEKILRPSMESTRDVAAAAKIGKLLG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER + S + + GK++AV+ SL G+ +
Sbjct: 75 ERLLFRGIPAVSVSMSRDQTYHGKVKAVIDSLTAAGVKL 113
>gi|326493468|dbj|BAJ85195.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + FV+A + H ++ A + K ++ + S D+ A IG++L
Sbjct: 15 FLKPYVLKMHFTNNFVTAQVIHTPSATIACAASSQEKILRPSMESTRDVAAAAKIGKLLG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER + S + + GK++AV+ SL G+ +
Sbjct: 75 ERLLFQGIPAVSVSMSRDQTYHGKVKAVIDSLTAAGVKL 113
>gi|115454743|ref|NP_001050972.1| Os03g0694800 [Oryza sativa Japonica Group]
gi|28273403|gb|AAO38489.1| putative ribosomal protein L18 [Oryza sativa Japonica Group]
gi|108710536|gb|ABF98331.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108710537|gb|ABF98332.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|108710539|gb|ABF98334.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549443|dbj|BAF12886.1| Os03g0694800 [Oryza sativa Japonica Group]
gi|215701026|dbj|BAG92450.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193567|gb|EEC75994.1| hypothetical protein OsI_13119 [Oryza sativa Indica Group]
gi|222625607|gb|EEE59739.1| hypothetical protein OsJ_12198 [Oryza sativa Japonica Group]
Length = 114
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 85 YMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILA 144
+++P+ L + + FVSA + H ++ A + K ++ + S D+ A IG++L
Sbjct: 15 FLKPYVLKMHFTNNFVSAQVIHTPSATVACSASSQEKLLRPSMESTRDVAAAAKIGKLLG 74
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
ER + S + + GK+RAV+ SL G+ +
Sbjct: 75 ERLLFRGIPAVSVSMSRDQTYHGKVRAVMDSLRAAGVKL 113
>gi|18087892|gb|AAL59046.1|AC087182_29 hypothetical protein [Oryza sativa Japonica Group]
Length = 430
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
+F Q T Y PF LD+ ++K V A HRV+S+ V VA + SKD+K + SR +
Sbjct: 321 TFNQMTDPYHHPFCLDIHVTKGSVRACFVHRVSSRVVTVAHSISKDMKFDVGSRKEC 377
>gi|409402022|ref|ZP_11251648.1| 50S ribosomal protein L18 [Acidocella sp. MX-AZ02]
gi|409129340|gb|EKM99198.1| 50S ribosomal protein L18 [Acidocella sp. MX-AZ02]
Length = 120
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A + KD+K L++ +D A A+G+++AER++EA
Sbjct: 29 LSVFRSGKHIYAQIIDDAQGRTLAAASSLDKDLKTSLKTGADKDAAAAVGKLIAERSKEA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G+D
Sbjct: 89 GVTQVVF-DRGSYLYHGRVKALAEAAREGGLD 119
>gi|302669977|ref|YP_003829937.1| 50S ribosomal protein L18 [Butyrivibrio proteoclasticus B316]
gi|302394450|gb|ADL33355.1| ribosomal protein L18 RplR [Butyrivibrio proteoclasticus B316]
Length = 122
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K+ ++ KH+ ++R E L VF S V A + V K + A T KDI
Sbjct: 4 KESRQEIRAKKHMKIRKRFSGTAERPRLAVFRSNNHVYAQVIDDVAGKTLVSASTLEKDI 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
KA L++ DI A IG ++A+RA E + + R + GK+ A+ ++ G++
Sbjct: 64 KAELKNTDDIDAATKIGDVVAKRALEKGIKAVVF-DRGGYIYHGKVEALAEAARKAGLE 121
>gi|88812741|ref|ZP_01127987.1| 50S ribosomal protein L18 [Nitrococcus mobilis Nb-231]
gi|88789979|gb|EAR21100.1| 50S ribosomal protein L18 [Nitrococcus mobilis Nb-231]
Length = 117
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAR 148
+ L V+ + R A + + + A T K I LRS +I A +GR++AERA+
Sbjct: 24 YRLCVYRTPRHTYAQIIAPAADRTLVAASTLEKAINGTLRSGGNIEAAKVVGRMIAERAQ 83
Query: 149 EADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A V T ++ R +F G+++A+ ++ + G+
Sbjct: 84 AAGVNTVAF-DRSGFRFHGRVKALAEAAREAGL 115
>gi|153816234|ref|ZP_01968902.1| hypothetical protein RUMTOR_02483 [Ruminococcus torques ATCC 27756]
gi|317501790|ref|ZP_07959976.1| ribosomal protein L18 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088689|ref|ZP_08337599.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336439572|ref|ZP_08619183.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_1_57FAA]
gi|145846417|gb|EDK23335.1| ribosomal protein L18 [Ruminococcus torques ATCC 27756]
gi|316896823|gb|EFV18908.1| ribosomal protein L18 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407212|gb|EGG86715.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336015801|gb|EGN45603.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 122
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH+ + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEIRRKKHMKLRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVAASTLQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G+++AE+A+E + + +R F +GKI+A+ + + G+
Sbjct: 64 KAELEKTNNVEAAACLGKVIAEKAKEKGITEVVF---DRGGFIYQGKIKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|29653606|ref|NP_819298.1| 50S ribosomal protein L18 [Coxiella burnetii RSA 493]
gi|153209776|ref|ZP_01947504.1| ribosomal protein L18 [Coxiella burnetii 'MSU Goat Q177']
gi|154705932|ref|YP_001425166.1| 50S ribosomal protein L18 [Coxiella burnetii Dugway 5J108-111]
gi|161829952|ref|YP_001596201.1| 50S ribosomal protein L18 [Coxiella burnetii RSA 331]
gi|165924139|ref|ZP_02219971.1| ribosomal protein L18 [Coxiella burnetii Q321]
gi|212213234|ref|YP_002304170.1| 50S ribosomal protein L18 [Coxiella burnetii CbuG_Q212]
gi|212218090|ref|YP_002304877.1| 50S ribosomal protein L18 [Coxiella burnetii CbuK_Q154]
gi|73621588|sp|Q83ER0.1|RL18_COXBU RecName: Full=50S ribosomal protein L18
gi|189041548|sp|A9KD15.1|RL18_COXBN RecName: Full=50S ribosomal protein L18
gi|189041549|sp|A9NAY6.1|RL18_COXBR RecName: Full=50S ribosomal protein L18
gi|226723306|sp|B6J5E8.1|RL18_COXB1 RecName: Full=50S ribosomal protein L18
gi|226723307|sp|B6J247.1|RL18_COXB2 RecName: Full=50S ribosomal protein L18
gi|29540868|gb|AAO89812.1| LSU ribosomal protein L18P [Coxiella burnetii RSA 493]
gi|120575253|gb|EAX31877.1| ribosomal protein L18 [Coxiella burnetii 'MSU Goat Q177']
gi|154355218|gb|ABS76680.1| LSU ribosomal protein L18P [Coxiella burnetii Dugway 5J108-111]
gi|161761819|gb|ABX77461.1| ribosomal protein L18 [Coxiella burnetii RSA 331]
gi|165916421|gb|EDR35025.1| ribosomal protein L18 [Coxiella burnetii Q321]
gi|212011644|gb|ACJ19025.1| LSU ribosomal protein L18P [Coxiella burnetii CbuG_Q212]
gi|212012352|gb|ACJ19732.1| LSU ribosomal protein L18P [Coxiella burnetii CbuK_Q154]
Length = 117
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + A L SK + A T K++++ ++ +I A AIG+++A+RA++A
Sbjct: 26 LCVHRSLNHIYAQLISPRDSKVLVCASTLEKEVRSQIKHGGNIQAATAIGKLIAQRAKKA 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V ++ R K+ G++RA+ +++ + GI+
Sbjct: 86 GVTKVAF-DRSGYKYHGRVRALAEAVREGGIE 116
>gi|349685830|ref|ZP_08896972.1| 50S ribosomal protein L18 [Gluconacetobacter oboediens 174Bp2]
Length = 120
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A + KD++ L+ +D+ A A+G++LAERA A
Sbjct: 29 LSVFRSGKNIYAQVIDDAAGRTLAAASSLDKDLRTTLKGGTDVKAAGAVGKLLAERAVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+IRA+ ++ + G+
Sbjct: 89 GVSKVVF-DRGAYLYHGRIRALAEAAREGGL 118
>gi|355704303|gb|AES02182.1| mitochondrial ribosomal protein L18 [Mustela putorius furo]
Length = 161
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAV-AGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
L V ++ V A + HR S QV V A T IK L S ++ AC ++GR+LAER E
Sbjct: 63 LRVIRTQHHVEARVEHR--SGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLE 120
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A + Y P + I+ + ++ + G+
Sbjct: 121 AGINFMVYQPTPWEAASDSIKRLQSAMTEGGV 152
>gi|325261510|ref|ZP_08128248.1| ribosomal protein L18 [Clostridium sp. D5]
gi|324032964|gb|EGB94241.1| ribosomal protein L18 [Clostridium sp. D5]
Length = 122
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH+ + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRRKKHMKLRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVAASTLQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G+++AE+A+E + + +R F +GK++A+ + + G+
Sbjct: 64 KAELEKTNNVEAAAQLGKVIAEKAKEKGITEVVF---DRGGFIYQGKVKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|163815991|ref|ZP_02207361.1| hypothetical protein COPEUT_02171 [Coprococcus eutactus ATCC 27759]
gi|158448801|gb|EDP25796.1| ribosomal protein L18 [Coprococcus eutactus ATCC 27759]
Length = 122
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
KH+ + R E L VF S + A + K + A T K IK L D+
Sbjct: 14 KHMRVRNRLAGTTERPRLAVFRSNNHMYAQIIDDSVGKTLVAASTTEKAIKDELEKTDDV 73
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
A +G+++AERA E + T Y +R F GK++A+ + + G++
Sbjct: 74 DAAAYVGKVIAERALEKGIKTVIY---DRGGFVYHGKVQALADAAREAGLE 121
>gi|317472021|ref|ZP_07931353.1| ribosomal protein L18 [Anaerostipes sp. 3_2_56FAA]
gi|316900425|gb|EFV22407.1| ribosomal protein L18 [Anaerostipes sp. 3_2_56FAA]
Length = 122
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 64 KKEKKSK-NTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKD 122
KK+ +SK KH+ + E L VF S + A + + A T KD
Sbjct: 3 KKQSRSKVRAKKHLKLRNHISGTAEKPRLSVFRSNNHMYAQIIDDTVGNTLVSASTLQKD 62
Query: 123 IKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNG 180
+KA L +D+ A +G+++AERA + T + +R F +GK++A+ + + G
Sbjct: 63 VKADLEKTNDVKAAAHLGKVIAERAVAKGISTVVF---DRGGFIYQGKVKALADAAREAG 119
Query: 181 I 181
+
Sbjct: 120 L 120
>gi|347760272|ref|YP_004867833.1| 50S ribosomal protein L18 [Gluconacetobacter xylinus NBRC 3288]
gi|347579242|dbj|BAK83463.1| LSU ribosomal protein L18P [Gluconacetobacter xylinus NBRC 3288]
Length = 120
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A + KD+++ L+ +D+ A A+G++LAERA A
Sbjct: 29 LSVFRSGKNIYAQVIDDAAGRTLAAASSLEKDLRSALKGGTDVTAAGAVGKLLAERAVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+I+A+ ++ + G+
Sbjct: 89 GVSKVVF-DRGAYLYHGRIKALAEAAREGGL 118
>gi|393764526|ref|ZP_10353132.1| 50S ribosomal protein L18 [Methylobacterium sp. GXF4]
gi|392730034|gb|EIZ87293.1| 50S ribosomal protein L18 [Methylobacterium sp. GXF4]
Length = 120
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + V K +A A + K +K L++ +D+ A A+G+++AERA+ A
Sbjct: 29 LSVFRSSKQIYVQVIDDVAGKTLAAASSIDKALKGDLKTGADVAAATAVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V T R + G+++AV ++ + G++
Sbjct: 89 GV-TKVIFDRSGYIYHGRVKAVAEAAREGGLE 119
>gi|335042307|ref|ZP_08535334.1| ribosomal protein L18 [Methylophaga aminisulfidivorans MP]
gi|333788921|gb|EGL54803.1| ribosomal protein L18 [Methylophaga aminisulfidivorans MP]
Length = 117
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E + L V + R + A + +SK +A A T ++K L++ +I A A+G+ +AE
Sbjct: 21 LEVYRLTVHRTPRHIYAQVLTHDSSKVIATASTLDAEVKKDLKATGNIDAATAVGKAIAE 80
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
RA + V ++ R ++ G+++A+ + +NG+
Sbjct: 81 RAAKQGVTEVAF-DRSGFRYHGRVKALADAARENGL 115
>gi|410960317|ref|XP_003986739.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Felis catus]
Length = 180
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAV-AGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
L V ++ V A + HR S QV V A T IK L S +++ AC ++GR+LAER E
Sbjct: 81 LRVIRTQHHVEALVEHR--SGQVVVSASTREWAIKKHLYSTTNVVACESVGRVLAERCLE 138
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A + Y P + ++ + ++ + G+
Sbjct: 139 AGINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|345784723|ref|XP_003432596.1| PREDICTED: 39S ribosomal protein L18, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 194
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + HR K V A T IK L S ++ AC +IGR+LAER EA
Sbjct: 95 LRVIKTQHHVEALVEHR-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAERCLEA 153
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 154 GINFMVYQPTPWEAASDSMKRLQNAMTEGGV 184
>gi|345784725|ref|XP_533465.2| PREDICTED: 39S ribosomal protein L18, mitochondrial isoform 2
[Canis lupus familiaris]
Length = 180
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + HR K V A T IK L S ++ AC +IGR+LAER EA
Sbjct: 81 LRVIKTQHHVEALVEHR-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAERCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQNAMTEGGV 170
>gi|163745560|ref|ZP_02152920.1| 50S ribosomal protein L18 [Oceanibulbus indolifex HEL-45]
gi|161382378|gb|EDQ06787.1| 50S ribosomal protein L18 [Oceanibulbus indolifex HEL-45]
Length = 119
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +SA L V +A A T KD+ V ++++ A +G ++AERA++A
Sbjct: 30 LSVHRSSKNISAQLIDDVNGVTLASASTMEKDLGVV--GKNNVEAATKVGALIAERAKKA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V T +Y R F GK++A+ ++ + G+ +
Sbjct: 88 GV-TEAYFDRGGFLFHGKVKALAEAAREGGLKI 119
>gi|118595319|ref|ZP_01552666.1| 50S ribosomal protein L18 [Methylophilales bacterium HTCC2181]
gi|118441097|gb|EAV47724.1| 50S ribosomal protein L18 [Methylophilales bacterium HTCC2181]
Length = 117
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A + L V+ S + A + +K +A A T ++K L++ S+ A +AIG+
Sbjct: 18 MAELHVTRLTVYRSNSNIYAQIIDGNNNKVIATASTTEAEVKKTLKNTSNKDAAIAIGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A +A V ++ R K+ G+I+A+ S +NG+
Sbjct: 78 IAEKAVKAGVKEIAF-DRSGYKYHGRIKALADSARENGL 115
>gi|302390974|ref|YP_003826794.1| 50S ribosomal protein L18 [Acetohalobium arabaticum DSM 5501]
gi|302203051|gb|ADL11729.1| LSU ribosomal protein L18P [Acetohalobium arabaticum DSM 5501]
Length = 116
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 88 PFT--LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
PF L V+ S + + A L ++ + +A A T +I+ + + ++ A +G ++AE
Sbjct: 20 PFKPRLSVYRSLKHIYAQLIDDLSGETLAAASTQDPEIRDEIDNGGNVEAAQMVGELIAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA + D+ + R +K+ G+++A+ ++ +NG++
Sbjct: 80 RALKEDIKEVVFD-RGGNKYHGRVKALAEAARENGLE 115
>gi|188581400|ref|YP_001924845.1| 50S ribosomal protein L18 [Methylobacterium populi BJ001]
gi|226723349|sp|B1Z777.1|RL18_METPB RecName: Full=50S ribosomal protein L18
gi|179344898|gb|ACB80310.1| ribosomal protein L18 [Methylobacterium populi BJ001]
Length = 120
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + + +A A + KD+KA L++ +D A A+G+++AERA+ A
Sbjct: 29 LSVFRSSKQIYVQVIDDAVGRTLAAASSLDKDLKASLKTGADKAAAEAVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R F G+++A+ + + G+D
Sbjct: 89 GVTKVVF-DRSGYIFHGRVKALADAAREGGLD 119
>gi|170748620|ref|YP_001754880.1| 50S ribosomal protein L18 [Methylobacterium radiotolerans JCM 2831]
gi|226723350|sp|B1LWR0.1|RL18_METRJ RecName: Full=50S ribosomal protein L18
gi|170655142|gb|ACB24197.1| ribosomal protein L18 [Methylobacterium radiotolerans JCM 2831]
Length = 120
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + V K +A A + K +K L++ +D+ A A+G+++AERA+ A
Sbjct: 29 LSVFRSSKQIYVQVIDDVAGKTLASASSIDKALKGELKTGADVAAATAVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V T R + G+++AV ++ + G++
Sbjct: 89 GV-TKVIFDRSGYIYHGRVKAVAEAAREGGLE 119
>gi|167748446|ref|ZP_02420573.1| hypothetical protein ANACAC_03190 [Anaerostipes caccae DSM 14662]
gi|167652438|gb|EDR96567.1| ribosomal protein L18 [Anaerostipes caccae DSM 14662]
Length = 122
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 64 KKEKKSK-NTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKD 122
KK+ +SK KH+ + E L VF S + A + + A T KD
Sbjct: 3 KKQSRSKVRAKKHLKLRNHISGTAEKPRLSVFRSNNHMYAQIIDDTVGNTLVSASTLQKD 62
Query: 123 IKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNG 180
+KA L D+ A +G+++AERA + T + +R F +GK++A+ + + G
Sbjct: 63 VKADLEKTDDVKAAAHLGKVIAERAVAKGISTVVF---DRGGFIYQGKVKALADAAREAG 119
Query: 181 I 181
+
Sbjct: 120 L 120
>gi|307109441|gb|EFN57679.1| hypothetical protein CHLNCDRAFT_142852 [Chlorella variabilis]
Length = 114
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA----IGR 141
++PF L +F+S +++ + VA A T ++ L+ +C +G+
Sbjct: 12 VQPFHLKLFLSNKYIYGQIWRAADQHVVAAASTIEAPVREALKEAGASASCSQAASRVGQ 71
Query: 142 ILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+LAERA++A V ++ R + + GK +A++ ++ + G+ +
Sbjct: 72 LLAERAQKAGVSGVTWPRRRGESYHGKRKALLDAMREAGLPL 113
>gi|296116716|ref|ZP_06835326.1| 50S ribosomal protein L18 [Gluconacetobacter hansenii ATCC 23769]
gi|295976928|gb|EFG83696.1| 50S ribosomal protein L18 [Gluconacetobacter hansenii ATCC 23769]
Length = 120
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + V + +A A + KD+++ ++ +DI A A+G++LAERA A
Sbjct: 29 LSVFRSGKNIYAQVIDDVAGRTLAAASSIEKDLRSAHKNGADIAAAGAVGKLLAERAVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+I+A+ ++ + G+
Sbjct: 89 GVSKVVF-DRGSYLYHGRIKALAEAAREGGL 118
>gi|434400526|ref|YP_007134530.1| ribosomal protein L18 [Stanieria cyanosphaera PCC 7437]
gi|428271623|gb|AFZ37564.1| ribosomal protein L18 [Stanieria cyanosphaera PCC 7437]
Length = 120
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H +++ E L VF S + V A + V +A A T +
Sbjct: 2 KSSRKQLVQRRHQRIRRKVNGTAERPRLSVFRSNQHVYAQIIDDVAQHTLAAASTLDSGL 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
K L SR+ A A+G+++A+RA E + + R + + G+I+A+ ++ + G+D
Sbjct: 62 KTELSSRATCEASAAVGKLVAQRALEQGITKVVF-DRGGNLYHGRIKALAEAAREAGLD 119
>gi|349699358|ref|ZP_08900987.1| 50S ribosomal protein L18 [Gluconacetobacter europaeus LMG 18494]
Length = 120
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A + KD++ L+ +D+ A A+G++LAERA A
Sbjct: 29 LSVFRSGKNIYAQVIDDAAGRTLAAASSLDKDLRTALKGGTDVKAAGAVGKLLAERAVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+I+A+ ++ + G+
Sbjct: 89 GVSKVVF-DRGAYLYHGRIKALAEAAREGGL 118
>gi|163851608|ref|YP_001639651.1| 50S ribosomal protein L18 [Methylobacterium extorquens PA1]
gi|218530417|ref|YP_002421233.1| 50S ribosomal protein L18 [Methylobacterium extorquens CM4]
gi|240138776|ref|YP_002963248.1| 50S ribosomal protein L18 [Methylobacterium extorquens AM1]
gi|254561376|ref|YP_003068471.1| 50S ribosomal protein L18 [Methylobacterium extorquens DM4]
gi|418058051|ref|ZP_12696032.1| ribosomal protein L18 [Methylobacterium extorquens DSM 13060]
gi|226723347|sp|A9W4S4.1|RL18_METEP RecName: Full=50S ribosomal protein L18
gi|254799735|sp|B7L0T4.1|RL18_METC4 RecName: Full=50S ribosomal protein L18
gi|163663213|gb|ABY30580.1| ribosomal protein L18 [Methylobacterium extorquens PA1]
gi|218522720|gb|ACK83305.1| ribosomal protein L18 [Methylobacterium extorquens CM4]
gi|240008745|gb|ACS39971.1| 50S ribosomal subunit protein L18 [Methylobacterium extorquens AM1]
gi|254268654|emb|CAX24613.1| 50S ribosomal subunit protein L18 [Methylobacterium extorquens DM4]
gi|373568379|gb|EHP94327.1| ribosomal protein L18 [Methylobacterium extorquens DSM 13060]
Length = 120
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + + +A A + KD+K+ L++ +D A A+G+++AERA+ A
Sbjct: 29 LSVFRSSKQIYVQVIDDAAGRTLAAASSLDKDLKSSLKTGADKAAAEAVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R F G+++A+ + + G+D
Sbjct: 89 GVTKVVF-DRSGYIFHGRVKALADAAREGGLD 119
>gi|355562179|gb|EHH18811.1| hypothetical protein EGK_15480 [Macaca mulatta]
Length = 179
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++R V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKPLQSAMTEGGVVLR 172
>gi|354593442|ref|ZP_09011485.1| ribosomal protein L18 [Commensalibacter intestini A911]
gi|353672553|gb|EHD14249.1| ribosomal protein L18 [Commensalibacter intestini A911]
Length = 120
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + V K +A A T +K L++ +DI A A+G+++AERA+ A
Sbjct: 29 LSVFRSSKNIYAQVIDDVAGKTLAAASTLDAAVKGQLKTGADIEAARAVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ ++ + G+
Sbjct: 89 GLEQVVF-DRGSYIYHGRVKALAEAAREGGL 118
>gi|254468856|ref|ZP_05082262.1| ribosomal protein L18 [beta proteobacterium KB13]
gi|207087666|gb|EDZ64949.1| ribosomal protein L18 [beta proteobacterium KB13]
Length = 118
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A + L V+ S + A + T+K +A A T D++ L+ SDI A IG+
Sbjct: 19 IAELGRTRLTVYRSNLNIYAQVIDGATNKVLASASTVEADMRKKLKKTSDIAAAAEIGKR 78
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A++A V ++ R ++ G+I+A+ + +NG+
Sbjct: 79 IAEKAKKAGVEDVAF-DRSGYRYHGRIKALADAARENGL 116
>gi|254502607|ref|ZP_05114758.1| ribosomal protein L18 [Labrenzia alexandrii DFL-11]
gi|222438678|gb|EEE45357.1| ribosomal protein L18 [Labrenzia alexandrii DFL-11]
Length = 120
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L +F S + + A + + A T KD+K L++ +D+ A A+G+++AERA A
Sbjct: 29 LSIFRSSKQIYAQIIDDAQGHTIVSASTIEKDLKGGLKTGADVSAAAAVGKLVAERAAAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R ++ G+++A+ + + G++
Sbjct: 89 GVKEVVF-DRGGYQYHGRVKALADAAREGGLE 119
>gi|114327234|ref|YP_744391.1| 50S ribosomal protein L18 [Granulibacter bethesdensis CGDNIH1]
gi|122327787|sp|Q0BUN4.1|RL18_GRABC RecName: Full=50S ribosomal protein L18
gi|114315408|gb|ABI61468.1| LSU ribosomal protein L18P [Granulibacter bethesdensis CGDNIH1]
Length = 119
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
+ + F+ R A P L VF S R + A + + +A A + K ++ LR+ +D
Sbjct: 12 QRLRFQLRAKANGRP-RLSVFRSGRHIYAQVIDDAAGRTLAAASSLEKPLREQLRTGADR 70
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A A+G+++AERA+ A V +A R + G+++A+ ++ + G+
Sbjct: 71 EAASAVGKLIAERAQAAGV-SAVVFDRGSYLYHGRVKALAEAAREGGL 117
>gi|116251556|ref|YP_767394.1| 50S ribosomal protein L18 [Rhizobium leguminosarum bv. viciae 3841]
gi|241204181|ref|YP_002975277.1| 50S ribosomal protein L18 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|424874874|ref|ZP_18298536.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|424881146|ref|ZP_18304778.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WU95]
gi|115504939|sp|Q1MIC5.1|RL18_RHIL3 RecName: Full=50S ribosomal protein L18
gi|115256204|emb|CAK07285.1| putative 50S ribosomal protein L18 [Rhizobium leguminosarum bv.
viciae 3841]
gi|240858071|gb|ACS55738.1| ribosomal protein L18 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|392517509|gb|EIW42241.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WU95]
gi|393170575|gb|EJC70622.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 120
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQVIDDVAGKTLASASTLEKDLRGSLKTGADTAAATVVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
++LAERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 79 KLLAERASKAGVTEVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|145588258|ref|YP_001154855.1| 50S ribosomal protein L18 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189041565|sp|A4SUX7.1|RL18_POLSQ RecName: Full=50S ribosomal protein L18
gi|145046664|gb|ABP33291.1| LSU ribosomal protein L18P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 117
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A + L V S +SA + +K VA A T KD++ +++ + A IG++
Sbjct: 18 IAEAQANRLTVIRSNTHISAQVYSPCGTKVVAAASTMEKDLRQAIKNGGNAQAAAQIGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AERA +A V ++ R ++ G+I+A+ ++ + G+
Sbjct: 78 VAERAVKAGVVDVAF-DRSGHRYHGRIKALAEAAREAGL 115
>gi|90077032|dbj|BAE88196.1| unnamed protein product [Macaca fascicularis]
Length = 179
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++R V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIGTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|62262602|gb|AAX78087.1| unknown protein [synthetic construct]
Length = 152
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 53 LDDDNSRPYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQ 112
+DDD+ K+ + +K K R + + L V+ + R V A + S
Sbjct: 17 IDDDDKHMLEMDKKTARLSRSKRTRIKLRELGHTR---LCVYRTPRHVYAQVISGDGSTV 73
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAV 172
+ A T KD+KA + ++ + +G I+A+R +E + ++ R K+ G+++A+
Sbjct: 74 LVAASTVEKDVKAKCKYTGNVESAAIVGEIIADRCKEKGISQVAF-DRSGYKYHGRVKAL 132
Query: 173 VQSLIDNGI 181
V++ ++G+
Sbjct: 133 VEAAREHGL 141
>gi|254492311|ref|ZP_05105484.1| ribosomal protein L18 [Methylophaga thiooxidans DMS010]
gi|224462483|gb|EEF78759.1| ribosomal protein L18 [Methylophaga thiooxydans DMS010]
Length = 117
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E + L V + R + A + ++K +A A T ++K L++ +I A A+G+ +AE
Sbjct: 21 LEVYRLTVHRTPRHIYAQVLTHDSTKVIATASTLDAEVKKELKNTGNIDAATAVGKAIAE 80
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
RA + + ++ R ++ G+++A+ + +NG+
Sbjct: 81 RAAKEGITEVAF-DRSGFRYHGRVKALADAARENGL 115
>gi|388453736|ref|NP_001252787.1| mitochondrial ribosomal protein L18 [Macaca mulatta]
gi|355749009|gb|EHH53492.1| hypothetical protein EGM_14141 [Macaca fascicularis]
gi|380812068|gb|AFE77909.1| 39S ribosomal protein L18, mitochondrial precursor [Macaca mulatta]
gi|383417743|gb|AFH32085.1| 39S ribosomal protein L18, mitochondrial precursor [Macaca mulatta]
gi|384946614|gb|AFI36912.1| 39S ribosomal protein L18, mitochondrial precursor [Macaca mulatta]
Length = 179
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++R V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|311243697|ref|XP_003121157.1| PREDICTED: hypothetical protein LOC100156324 [Sus scrofa]
Length = 188
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ + A + HR + V A T IK L S ++ AC ++GR+LAER EA
Sbjct: 89 LRVIRTQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEA 147
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + I+ + ++ + G+ ++
Sbjct: 148 GINFMVYHPTPWEAASDSIKRLQHAMTEGGVVLR 181
>gi|209964056|ref|YP_002296971.1| 50S ribosomal protein L18 [Rhodospirillum centenum SW]
gi|226723369|sp|B6IRS2.1|RL18_RHOCS RecName: Full=50S ribosomal protein L18
gi|209957522|gb|ACI98158.1| ribosomal protein L18 [Rhodospirillum centenum SW]
Length = 120
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 79 KQRTVAYMEPFT-----LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
KQR A ++ + L VF S + + A + +A A + KD++ L++ +DI
Sbjct: 12 KQRVRARIKKYGSGRPRLSVFRSSKHIYAQIIDDTAGHTLAAASSLDKDLREGLKTGADI 71
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A A+G+++AERA V TA R F G+++A+ + + G+
Sbjct: 72 DAAKAVGKLIAERATAKGV-TAVVFDRGAYLFHGRVKALADAAREAGL 118
>gi|194033401|ref|XP_001928391.1| PREDICTED: hypothetical protein LOC100156324 [Sus scrofa]
Length = 180
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ + A + HR + V A T IK L S ++ AC ++GR+LAER EA
Sbjct: 81 LRVIRTQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + I+ + ++ + G+ ++
Sbjct: 140 GINFMVYHPTPWEAASDSIKRLQHAMTEGGVVLR 173
>gi|160902240|ref|YP_001567821.1| 50S ribosomal protein L18 [Petrotoga mobilis SJ95]
gi|189041564|sp|A9BG02.1|RL18_PETMO RecName: Full=50S ribosomal protein L18
gi|160359884|gb|ABX31498.1| ribosomal protein L18 [Petrotoga mobilis SJ95]
Length = 122
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 66 EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 125
+KK+ +H+ ++ E L VF S++ + A + +A A T K +K
Sbjct: 6 DKKALRQKRHLRVRKNVRGTSEKPRLTVFKSQKHIYAQIIDDTKGVTLASASTTQKQLKE 65
Query: 126 VLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L D A +G+++AE+A+E + + R K+ GK++A+ ++ + G+
Sbjct: 66 KLEKTWDENAAKEVGKLIAEKAKEKGITEIVF-DRSGYKYHGKVKALAEAARETGL 120
>gi|399034998|ref|ZP_10732552.1| ribosomal protein L18, bacterial type [Rhizobium sp. CF122]
gi|398067210|gb|EJL58749.1| ribosomal protein L18, bacterial type [Rhizobium sp. CF122]
Length = 120
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQIIDDVAGKTLASASTLDKDLRGSLKTGADTAAAALVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+IRA+ ++ + G+
Sbjct: 79 KLVAERASKAGVKDVVF---DRGAFIYHGRIRALAEAAREGGL 118
>gi|374709496|ref|ZP_09713930.1| 50S ribosomal protein L18 [Sporolactobacillus inulinus CASD]
Length = 120
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK+K + +H+ + R V E L+VF S + + A L SK V + ++S D
Sbjct: 4 KKDKNALRKKRHLHVRHRIVGTTERPRLNVFRSSKNIYAQLID--DSKGVTIVSSSSIDK 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
L SD+ A +G ++ ERA E + + R + G+++AV + + G++
Sbjct: 62 AFDLEKGSDVAAAKKVGALIGERALEKGIKAIVF-DRSGYIYHGRVKAVAEGAREAGLE 119
>gi|15965125|ref|NP_385478.1| 50S ribosomal protein L18 [Sinorhizobium meliloti 1021]
gi|334315911|ref|YP_004548530.1| 50S ribosomal protein L18 [Sinorhizobium meliloti AK83]
gi|384529083|ref|YP_005713171.1| 50S ribosomal protein L18 [Sinorhizobium meliloti BL225C]
gi|384536637|ref|YP_005720722.1| 50S ribosomal protein L18 [Sinorhizobium meliloti SM11]
gi|407720312|ref|YP_006839974.1| 50S ribosomal protein L18 [Sinorhizobium meliloti Rm41]
gi|418404887|ref|ZP_12978325.1| 50S ribosomal protein L18 [Sinorhizobium meliloti CCNWSX0020]
gi|433613143|ref|YP_007189941.1| ribosomal protein L18, bacterial type [Sinorhizobium meliloti GR4]
gi|73621681|sp|Q92QF4.1|RL18_RHIME RecName: Full=50S ribosomal protein L18
gi|15074305|emb|CAC45951.1| Probable 50S ribosomal protein L18 [Sinorhizobium meliloti 1021]
gi|333811259|gb|AEG03928.1| ribosomal protein L18 [Sinorhizobium meliloti BL225C]
gi|334094905|gb|AEG52916.1| ribosomal protein L18 [Sinorhizobium meliloti AK83]
gi|336033529|gb|AEH79461.1| 50S ribosomal protein L18 [Sinorhizobium meliloti SM11]
gi|359501151|gb|EHK73775.1| 50S ribosomal protein L18 [Sinorhizobium meliloti CCNWSX0020]
gi|407318544|emb|CCM67148.1| 50S ribosomal protein L18 [Sinorhizobium meliloti Rm41]
gi|429551333|gb|AGA06342.1| ribosomal protein L18, bacterial type [Sinorhizobium meliloti GR4]
Length = 120
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
+ VA P L V S + + A + V K +A A T D+++ L++ +D A A+G
Sbjct: 20 KAVANGRP-RLSVHRSSKNIYAQIIDDVAGKTIASASTLDTDLRSSLKTGADTEAATAVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
++LAERA +A + + +R F G+I+A+ ++ + G++
Sbjct: 79 KLLAERASKAGIKDVVF---DRGAFIYHGRIKALAEAAREGGLN 119
>gi|426235015|ref|XP_004011486.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Ovis aries]
Length = 180
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S+ + A + HR + V A T+ IK L S + AC ++GR+LA+R EA
Sbjct: 81 LRVIRSQHHIEALVEHR-NGQVVVSASTHEWAIKKHLYSTRSVVACESVGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++I+ G+
Sbjct: 140 GINFMVYQPTPWEATSDSMKRLQIAMIEGGV 170
>gi|149744077|ref|XP_001500689.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like [Equus
caballus]
Length = 191
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ + A + HR + K V A T IK L ++ AC +IGR+LAER EA
Sbjct: 81 LRVIKTQHHIEALVEHR-SGKVVVSASTREWAIKKHLYRTKNVVACESIGRVLAERCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 140 GINFMVYQPTPWEAASDSLKRLQSAMTEGGV 170
>gi|357012799|ref|ZP_09077798.1| 50S ribosomal protein L18 [Paenibacillus elgii B69]
Length = 122
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H+ +++ E L++F S + + A L V +A A T K++
Sbjct: 4 KGDKNKARLKRHLRVRKKIQGTTERPRLNIFRSSKHMYAQLIDDVKGVTIAAASTQDKEL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
K L + + A +G ++AERA++A V + R + G+++A+ + + G++
Sbjct: 64 KEGLGNGGNAEAASKVGALIAERAKKAGVVKVVF-DRGGYLYHGRVKALADAAREAGLE 121
>gi|355564128|gb|EHH20628.1| hypothetical protein EGK_03517, partial [Macaca mulatta]
Length = 179
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++R V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAALDSMKPLQSAMTEGGLVLR 172
>gi|337751711|ref|YP_004645873.1| 50S ribosomal protein L18 [Paenibacillus mucilaginosus KNP414]
gi|379724657|ref|YP_005316788.1| protein RplR [Paenibacillus mucilaginosus 3016]
gi|386727406|ref|YP_006193732.1| 50S ribosomal protein L18 [Paenibacillus mucilaginosus K02]
gi|336302900|gb|AEI46003.1| RplR [Paenibacillus mucilaginosus KNP414]
gi|378573329|gb|AFC33639.1| RplR [Paenibacillus mucilaginosus 3016]
gi|384094531|gb|AFH65967.1| 50S ribosomal protein L18 [Paenibacillus mucilaginosus K02]
Length = 122
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H+ +++ E L++F S + + A L V +A A T K++
Sbjct: 4 KADKNKARLKRHLRVRKKIQGTAERPRLNIFRSSKHMYAQLIDDVKGVTIASASTQDKEL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
KA + + + A +G ++AERA+ A V + R + G+++A+ + + G++
Sbjct: 64 KAEIGNGGNAEAATKVGALIAERAKAAGVVQVVF-DRGGYLYHGRVKALADAAREAGLE 121
>gi|313673451|ref|YP_004051562.1| 50S ribosomal protein L18 [Calditerrivibrio nitroreducens DSM
19672]
gi|312940207|gb|ADR19399.1| LSU ribosomal protein L18P [Calditerrivibrio nitroreducens DSM
19672]
Length = 119
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 66 EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 125
+KK +HI +++ L V+ S R++ A + + + A + KD++
Sbjct: 3 DKKDSRVKRHIRIRKKISGTASRPRLAVYRSNRYIYAQIINDENGTTIVSASSLEKDLRE 62
Query: 126 VLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
R +I IG+++AERA V + + R + GKI+A+ S ++G+D
Sbjct: 63 KFLGRVNIEVSKTIGKLIAERALAKGVKSVVF-DRGGYIYHGKIKALADSARESGLD 118
>gi|195119764|ref|XP_002004399.1| GI19636 [Drosophila mojavensis]
gi|193909467|gb|EDW08334.1| GI19636 [Drosophila mojavensis]
Length = 188
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VSA + H + + A T+ IK L +D PA + +GR+LA+R +
Sbjct: 62 TLEINTSGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTNDTPAFVNLGRVLAQRCLQ 120
Query: 150 ADV--YTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
A + T + T K E ++AV +NG+ +
Sbjct: 121 AGITEMTCNVTAVPGSKLEKLLKAVQ----ENGVSFQ 153
>gi|166031643|ref|ZP_02234472.1| hypothetical protein DORFOR_01343 [Dorea formicigenerans ATCC
27755]
gi|346307810|ref|ZP_08849940.1| 50S ribosomal protein L18 [Dorea formicigenerans 4_6_53AFAA]
gi|166028620|gb|EDR47377.1| ribosomal protein L18 [Dorea formicigenerans ATCC 27755]
gi|345904768|gb|EGX74512.1| 50S ribosomal protein L18 [Dorea formicigenerans 4_6_53AFAA]
Length = 122
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRVNKHRKLRNRLAGTTECPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G+++AE+A E + + +R F +GKI+A+ + + G+
Sbjct: 64 KANLEKTNNVDAAAYLGKVIAEKALEKGIKDVVF---DRGGFIYQGKIQALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|372487037|ref|YP_005026602.1| 50S ribosomal protein L18 [Dechlorosoma suillum PS]
gi|359353590|gb|AEV24761.1| ribosomal protein L18, bacterial type [Dechlorosoma suillum PS]
Length = 118
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF + + A + SK +A A + +++ L + ++ A AIG++
Sbjct: 19 IAELKAVRLCVFRTNSHIYAQVISPCGSKVLAAASSLEPEVRKDLPNGGNVNAAAAIGKL 78
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AERA++A + ++ R ++ G+++A+ ++ +NG+
Sbjct: 79 IAERAKKAGIEQVAFD-RAGFQYHGRVKALAEAARENGL 116
>gi|171462895|ref|YP_001797008.1| 50S ribosomal protein L18 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226723359|sp|B1XSR7.1|RL18_POLNS RecName: Full=50S ribosomal protein L18
gi|171192433|gb|ACB43394.1| ribosomal protein L18 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 117
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A + L V S +SA + +K VA A T KD++ +++ S A IG++
Sbjct: 18 IAEAQANRLTVIRSNSHISAQVYSPCGTKVVAAASTMEKDLRQAIKNGSYAEAAKQIGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AERA +A V ++ R ++ G+I+A+ ++ + G+
Sbjct: 78 VAERAVKAGVVDVAF-DRSGHRYHGRIKALAEAAREAGL 115
>gi|395767207|ref|ZP_10447742.1| 50S ribosomal protein L18 [Bartonella doshiae NCTC 12862]
gi|395414520|gb|EJF80962.1| 50S ribosomal protein L18 [Bartonella doshiae NCTC 12862]
Length = 120
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S SD A A+G+++AERA+EA
Sbjct: 29 LSVYRSNQNIYAQIIDDLRGCTLVSASTLEGDLKKSLKSGSDKEAAFAVGKLIAERAKEA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++A+ ++ + G+
Sbjct: 89 GVREVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|443329310|ref|ZP_21057897.1| ribosomal protein L18, bacterial type [Xenococcus sp. PCC 7305]
gi|442791052|gb|ELS00552.1| ribosomal protein L18, bacterial type [Xenococcus sp. PCC 7305]
Length = 120
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + V VA A T ++K+ L+S S A A+G+++A+RA E
Sbjct: 29 LCVFRSHKHIYAQVIDDVAQNTVAAASTLDSEVKSDLKSTSTCEASSAVGKLVAQRALEK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + + G+I+++ ++ + G+D
Sbjct: 89 GVTKVVF-DRGGNLYHGRIQSLAEAAREAGLD 119
>gi|402486068|ref|ZP_10832900.1| 50S ribosomal protein L18 [Rhizobium sp. CCGE 510]
gi|401814724|gb|EJT07054.1| 50S ribosomal protein L18 [Rhizobium sp. CCGE 510]
Length = 120
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 67 KKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAV 126
+++ +HI ++VA P L V S + + A + V K +A A T KD++
Sbjct: 10 RRANRVRRHI----KSVANGRP-RLSVHRSSKNIYAQVIDDVAGKTLASASTLEKDLRGS 64
Query: 127 LRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L++ +D A +G+++AERA +A V + R F G+I+A+ + + G+
Sbjct: 65 LKTGADTAAAAVVGKLVAERASKAGVTEVVF-DRGAFIFHGRIKALADAAREGGL 118
>gi|167767787|ref|ZP_02439840.1| hypothetical protein CLOSS21_02322 [Clostridium sp. SS2/1]
gi|317497079|ref|ZP_07955406.1| ribosomal protein L18 [Lachnospiraceae bacterium 5_1_63FAA]
gi|429762520|ref|ZP_19294909.1| ribosomal protein L18 [Anaerostipes hadrus DSM 3319]
gi|167710526|gb|EDS21105.1| ribosomal protein L18 [Clostridium sp. SS2/1]
gi|291558872|emb|CBL37672.1| LSU ribosomal protein L18P [butyrate-producing bacterium SSC/2]
gi|316895624|gb|EFV17779.1| ribosomal protein L18 [Lachnospiraceae bacterium 5_1_63FAA]
gi|429181510|gb|EKY22669.1| ribosomal protein L18 [Anaerostipes hadrus DSM 3319]
Length = 122
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 64 KKEKKSK-NTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKD 122
+KE +SK KH + R E L VF S + A + + A T KD
Sbjct: 3 RKESRSKIRAKKHYKLRNRINGTSERPRLSVFRSNDHMYAQIIDDTVGNTLVSASTTQKD 62
Query: 123 IKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNG 180
+KA L +D+ A +G+++AERA + + +R F GKI A+ + + G
Sbjct: 63 VKAELEKTNDVAAASYLGKVIAERALAKGITEVVF---DRGGFIYHGKIEALADAAREAG 119
Query: 181 I 181
+
Sbjct: 120 L 120
>gi|395790902|ref|ZP_10470361.1| 50S ribosomal protein L18 [Bartonella alsatica IBS 382]
gi|395409198|gb|EJF75797.1| 50S ribosomal protein L18 [Bartonella alsatica IBS 382]
Length = 120
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K VL+S +D A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLHGCTLVSASTLEGDLKKVLKSGADKEAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++A+ ++ + G+
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|26354168|dbj|BAC40714.1| unnamed protein product [Mus musculus]
Length = 114
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H + + V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 15 LRVVKTQHHVEAFVEH-LNGQVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 73
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + I+ + ++ ++G+ ++
Sbjct: 74 GINFMVYQPTPWEASSDSIKRLQNAMTESGVMLR 107
>gi|395787659|ref|ZP_10467251.1| 50S ribosomal protein L18 [Bartonella birtlesii LL-WM9]
gi|395410281|gb|EJF76836.1| 50S ribosomal protein L18 [Bartonella birtlesii LL-WM9]
Length = 120
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K +L+S +D A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLHGCTLVSASTLDSDLKKLLKSGADKEAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGLN 119
>gi|395782704|ref|ZP_10463076.1| 50S ribosomal protein L18 [Bartonella rattimassiliensis 15908]
gi|395416582|gb|EJF82952.1| 50S ribosomal protein L18 [Bartonella rattimassiliensis 15908]
Length = 120
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S +D A A+GR++AERA++A
Sbjct: 29 LSVYRSNQNIYAQVIDDLRGCTLVSASTLESDLKKSLKSGADKEAAFAVGRLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+I+A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRIKALAEAAREGGLN 119
>gi|297262095|ref|XP_001086086.2| PREDICTED: 39S ribosomal protein L18, mitochondrial-like [Macaca
mulatta]
Length = 221
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++R V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 122 LRVIRTQRHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 180
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 181 GINFMVYQPTPWEAALDSMKRLQSAMTEGGLVLR 214
>gi|197303828|ref|ZP_03168864.1| hypothetical protein RUMLAC_02567 [Ruminococcus lactaris ATCC
29176]
gi|197297121|gb|EDY31685.1| ribosomal protein L18 [Ruminococcus lactaris ATCC 29176]
Length = 122
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH+ + R + L VF S + A + + A T K++
Sbjct: 4 KKSRSEIRRKKHLKLRNRFSGTTQRPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKEV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +D+ A +G+++AERA E + + +R F +GKI+A+ + + G+
Sbjct: 64 KAELEKTNDVNAAAYLGKVIAERAIEKGITEVVF---DRGGFIYQGKIKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|150396223|ref|YP_001326690.1| 50S ribosomal protein L18 [Sinorhizobium medicae WSM419]
gi|166218859|sp|A6U875.1|RL18_SINMW RecName: Full=50S ribosomal protein L18
gi|150027738|gb|ABR59855.1| ribosomal protein L18 [Sinorhizobium medicae WSM419]
Length = 120
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
+ VA P L V S + + A + V K +A A T D++ L++ +D A A+G
Sbjct: 20 KAVANGRP-RLSVHRSSKNIYAQIIDDVAGKTIASASTLDTDLRFSLKTGADTEAATAVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
++LAERA +A V + +R F G+I+A+ ++ + G++
Sbjct: 79 KLLAERASKAGVKDVVF---DRGAFIYHGRIKALAEAAREGGLN 119
>gi|90417750|ref|ZP_01225662.1| ribosomal protein L18 [Aurantimonas manganoxydans SI85-9A1]
gi|90337422|gb|EAS51073.1| ribosomal protein L18 [Aurantimonas manganoxydans SI85-9A1]
Length = 120
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + + A + + +A A T +++ L++ +D A A+G+++AERA+EA
Sbjct: 29 LSVHRSSKNIYAQIIDDTAGRTLAAASTLDTSLRSQLKTGADTEAAAAVGKLVAERAKEA 88
Query: 151 DVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
V + +R F G+I+A+ +S + G++
Sbjct: 89 GVTDVVF---DRGAFIYHGRIKALAESAREGGLN 119
>gi|440226353|ref|YP_007333444.1| 50S ribosomal protein L18 [Rhizobium tropici CIAT 899]
gi|440037864|gb|AGB70898.1| 50S ribosomal protein L18 [Rhizobium tropici CIAT 899]
Length = 120
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQVIDDVAGKTLAAASTLDKDLRGSLKTGADTAAAALVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 79 KLVAERASKAGVKEVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|90080271|dbj|BAE89617.1| unnamed protein product [Macaca fascicularis]
Length = 179
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++R V A + H+ + V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIRTQRHVEALVEHQ-NGEVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|330993863|ref|ZP_08317795.1| 50S ribosomal protein L18 [Gluconacetobacter sp. SXCC-1]
gi|329759131|gb|EGG75643.1| 50S ribosomal protein L18 [Gluconacetobacter sp. SXCC-1]
Length = 90
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 93 VFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADV 152
+F S + + A + + +A A + KD+++ L+ +D+ A A+G++LAERA A V
Sbjct: 1 MFRSGKNIYAQVIDDAAGRTLAAASSLEKDLRSALKGGTDVTAAGAVGKLLAERAVAAGV 60
Query: 153 YTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ R + G+I+A+ ++ + G+
Sbjct: 61 SKVVF-DRGAYLYHGRIKALAEAAREGGL 88
>gi|194755218|ref|XP_001959889.1| GF11810 [Drosophila ananassae]
gi|190621187|gb|EDV36711.1| GF11810 [Drosophila ananassae]
Length = 189
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VSA + H + + A T+ IK L +D A + +GR+LA R +
Sbjct: 61 TLEINTSGRYVSADVKH-FENGIILSASTSEWAIKQQLYKTNDTAAFINLGRVLAHRCLQ 119
Query: 150 ADVYTASYTPRERDKFEG-KIRAVVQSLIDNGIDVK 184
+ + + D G K++ ++Q+L DNG+ K
Sbjct: 120 SGITEMTCN---VDAVPGSKLQKLLQTLQDNGVSFK 152
>gi|86135783|ref|ZP_01054362.1| ribosomal protein L18 [Roseobacter sp. MED193]
gi|85826657|gb|EAQ46853.1| ribosomal protein L18 [Roseobacter sp. MED193]
Length = 119
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +S L + K +A A T KD+ V +++I A +G ++AERA+ A
Sbjct: 30 LSVHRSNKNLSVQLIDDLAGKTLASASTLEKDLGFV--GKNNIEAATKVGSVIAERAKAA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V T +Y R F GK++A+ + + G+ +
Sbjct: 88 GV-TEAYFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|37523480|ref|NP_926857.1| 50S ribosomal protein L18 [Gloeobacter violaceus PCC 7421]
gi|73621599|sp|Q7NEG8.1|RL18_GLOVI RecName: Full=50S ribosomal protein L18
gi|35214484|dbj|BAC91852.1| 50S ribosomal protein L18 [Gloeobacter violaceus PCC 7421]
Length = 120
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K ++K+ +H +++ E L V+ S R + A + V + + A T +
Sbjct: 2 KVDRKTATHRRHQRIRRKIAGTPEQPRLAVYRSNRHIYAQVIDDVHQRTLVAASTLEAPL 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
++ + A A+GR++AERA+E + TA R + G+++AV + + G+D
Sbjct: 62 RSGEEGTATCEAATAVGRLVAERAKEKGI-TAVVFDRGGKLYHGRVKAVADAAREAGLD 119
>gi|77736163|ref|NP_001029780.1| 39S ribosomal protein L18, mitochondrial [Bos taurus]
gi|115502821|sp|Q3ZBR7.1|RM18_BOVIN RecName: Full=39S ribosomal protein L18, mitochondrial;
Short=L18mt; Short=MRP-L18; Flags: Precursor
gi|73587083|gb|AAI03150.1| Mitochondrial ribosomal protein L18 [Bos taurus]
gi|296483859|tpg|DAA25974.1| TPA: 39S ribosomal protein L18, mitochondrial precursor [Bos
taurus]
Length = 180
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S+ + A + HR + V A T IK L S + AC ++GR+LA+R EA
Sbjct: 81 LRVIRSQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTKSVVACESVGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + +I+ G+
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQIGMIEGGV 170
>gi|170738687|ref|YP_001767342.1| 50S ribosomal protein L18 [Methylobacterium sp. 4-46]
gi|226723351|sp|B0UHV3.1|RL18_METS4 RecName: Full=50S ribosomal protein L18
gi|168192961|gb|ACA14908.1| ribosomal protein L18 [Methylobacterium sp. 4-46]
Length = 120
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + + + +A A + KD++A L++ +D A L +G+++AERA+ A
Sbjct: 29 LSVFRSSKQIYVQVIDDASGRTLAAASSLDKDLRARLKTGADKAAALEVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V T R + G+++A+ + + G++
Sbjct: 89 GV-TKVIFDRSGYLYHGRVKALADAAREGGLE 119
>gi|260061913|ref|YP_003194993.1| 50S ribosomal protein L18 [Robiginitalea biformata HTCC2501]
gi|88786046|gb|EAR17215.1| 50S ribosomal protein L18 [Robiginitalea biformata HTCC2501]
Length = 100
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + T K + A + K++ ++S+I A A+G+ LAERAREA
Sbjct: 11 LSVFRSNKEIYAQVIDDTTGKTLVAASSRDKELAKAKGTKSEIAA--AVGKSLAERAREA 68
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V ++ R ++ G+++++ + + G+
Sbjct: 69 GVEKVAF-DRGGYQYHGRVKSLAEGAREGGL 98
>gi|13385808|ref|NP_080586.1| 39S ribosomal protein L18, mitochondrial [Mus musculus]
gi|41017793|sp|Q9CQL5.1|RM18_MOUSE RecName: Full=39S ribosomal protein L18, mitochondrial;
Short=L18mt; Short=MRP-L18; Flags: Precursor
gi|12833553|dbj|BAB22567.1| unnamed protein product [Mus musculus]
gi|12843022|dbj|BAB25828.1| unnamed protein product [Mus musculus]
gi|15030301|gb|AAH11425.1| Mitochondrial ribosomal protein L18 [Mus musculus]
gi|148670092|gb|EDL02039.1| mitochondrial ribosomal protein L18 [Mus musculus]
Length = 180
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 76 ISFKQRTVAYMEP-----FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSR 130
++ K+R A + P L V ++ V A + H + + V A T IK L S
Sbjct: 61 VARKERGWATVWPNREFWHRLRVVKTQHHVEAFVEH-LNGQVVVSASTREWAIKKHLYST 119
Query: 131 SDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
++ AC +IGR+LA+R EA + Y P + I+ + ++ ++G+ ++
Sbjct: 120 RNVVACESIGRVLAQRCLEAGINFMVYQPTPWEASSDSIKRLQNAMTESGVMLR 173
>gi|254475810|ref|ZP_05089196.1| ribosomal protein L18 [Ruegeria sp. R11]
gi|214030053|gb|EEB70888.1| ribosomal protein L18 [Ruegeria sp. R11]
Length = 119
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V VA A T KD+ V +++I A
Sbjct: 19 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVRGVTVAAASTLEKDLGFV--GKNNIEAATK 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G ++AERA+ A V T +Y R F GK++A+ + + G+ +
Sbjct: 76 VGSVIAERAKAAGV-TEAYFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|426355053|ref|XP_004044952.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Gorilla
gorilla gorilla]
Length = 180
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ + K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 81 LRVIRTQHHVEALVEHQ-SGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 173
>gi|237653980|ref|YP_002890294.1| 50S ribosomal protein L18 [Thauera sp. MZ1T]
gi|237625227|gb|ACR01917.1| ribosomal protein L18 [Thauera sp. MZ1T]
Length = 117
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + S+ +A A T D++A + + + A A+G++
Sbjct: 18 IAELKAVRLTVFRSNCHIYAQIISGCGSRVLAAASTVEPDVRAQVANGGNKAAAEAVGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AERA+ A V S+ R + G+++A+ ++ + G+
Sbjct: 78 IAERAKAAGVEQVSF-DRSGFLYHGRVKALAEAAREGGL 115
>gi|409436850|ref|ZP_11264009.1| 50S ribosomal subunit protein L18 [Rhizobium mesoamericanum
STM3625]
gi|408751324|emb|CCM75163.1| 50S ribosomal subunit protein L18 [Rhizobium mesoamericanum
STM3625]
Length = 120
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQIIDDVAGKTLASASTLDKDLRGSLKTGADTAAAALVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 79 KLVAERASKAGVKDVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|384227923|ref|YP_005619668.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538863|gb|AEO08840.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 122
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 80 QRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAI 139
+R + + L + + R + A + + SK +A A T K I L+ + A I
Sbjct: 20 RRKIKKLGAIRLVIHRTPRHIYAQIISSIESKVLAFASTLEKKINCSLKYTGNKEAAAKI 79
Query: 140 GRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
G+I+AERA +Y S+ R K+ G+++ + +S + G+
Sbjct: 80 GKIIAERALSKGIYNVSF-DRSGFKYHGRVQVLAESAREVGLK 121
>gi|12845393|dbj|BAB26735.1| unnamed protein product [Mus musculus]
Length = 180
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 76 ISFKQRTVAYMEP-----FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSR 130
++ K+R A + P L V ++ V A + H + + V A T IK L S
Sbjct: 61 VARKERGWATVWPNREFWHRLRVVKTQHHVEAFVEH-LNGQVVVSASTREWAIKKHLYST 119
Query: 131 SDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
++ AC +IGR+LA+R EA + Y P + I+ + ++ ++G+ ++
Sbjct: 120 RNVVACESIGRVLAQRCLEAGINFMVYQPTPWEASSDSIKRLQNAMTESGVMLR 173
>gi|451942165|ref|YP_007462802.1| 50S ribosomal protein L18 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901552|gb|AGF76014.1| 50S ribosomal protein L18 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 120
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L ++ S + + A + + + A T D+K VL+S +D A A+G+++AERA++A
Sbjct: 29 LSIYRSNQNIYAQIIDDLRGCTLVSASTLEGDLKKVLKSGADKEAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++A+ ++ + G+
Sbjct: 89 GVNQVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|154505153|ref|ZP_02041891.1| hypothetical protein RUMGNA_02666 [Ruminococcus gnavus ATCC 29149]
gi|153794632|gb|EDN77052.1| ribosomal protein L18 [Ruminococcus gnavus ATCC 29149]
Length = 122
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH+ + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRRKKHMKLRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVAASTLEKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G+++AE+A+ + + +R F +GK++A+ + + G+
Sbjct: 64 KAELEKTNNVEAAAYLGKVIAEKAKAKGITDVVF---DRGGFIYQGKVKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|108710538|gb|ABF98333.1| ribosomal protein L18 family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 92
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 99 FVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYT 158
FVSA + H ++ A + K ++ + S D+ A IG++L ER + S +
Sbjct: 7 FVSAQVIHTPSATVACSASSQEKLLRPSMESTRDVAAAAKIGKLLGERLLFRGIPAVSVS 66
Query: 159 PRERDKFEGKIRAVVQSLIDNGIDV 183
+ GK+RAV+ SL G+ +
Sbjct: 67 MSRDQTYHGKVRAVMDSLRAAGVKL 91
>gi|126739668|ref|ZP_01755360.1| 50S ribosomal protein L18 [Roseobacter sp. SK209-2-6]
gi|126719314|gb|EBA16024.1| 50S ribosomal protein L18 [Roseobacter sp. SK209-2-6]
Length = 119
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +S L V K +A A T KD+ V ++++ A +G ++AERA+ A
Sbjct: 30 LSVHRSNKNLSVQLIDDVQGKTLAAASTLEKDLGFV--GKNNVEAATKVGSVIAERAKAA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V A Y R F GK++A+ + + G+ +
Sbjct: 88 GVEEA-YFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|348561159|ref|XP_003466380.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like [Cavia
porcellus]
Length = 179
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H + V A T IK L S ++ AC IGR+LA+R EA
Sbjct: 80 LRVIRTQHHVEALVEH-WNGRVVVSASTREWAIKKHLYSTRNVVACETIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V Y P + I+ + ++ + GI
Sbjct: 139 GVNFMVYQPTPWEAAADSIKRLQNAMTEGGI 169
>gi|449664831|ref|XP_002162263.2| PREDICTED: uncharacterized protein LOC100210278 [Hydra
magnipapillata]
Length = 323
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L++ I+ R +A + + + A T I+A L + +D+ A + I RILAER ++
Sbjct: 25 LNLEITNRHTNA-FVENINGEILCYASTCEPYIRARLHNTTDVMAVVNIARILAERCKQT 83
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R D+ KIR LI+NGI
Sbjct: 84 GIVRVLWRTR-LDRTTEKIREFEGILINNGI 113
>gi|194364550|ref|YP_002027160.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia R551-3]
gi|194347354|gb|ACF50477.1| ribosomal protein L18 [Stenotrophomonas maltophilia R551-3]
Length = 117
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T DIK L++ + A +GRI+AERA+ A V ++ R ++ G+I
Sbjct: 45 SKVLAAANTTQADIKDGLKNGKNADAAAKVGRIVAERAKAAGVEKVAF-DRSGYRYHGRI 103
Query: 170 RAVVQSLIDNGI 181
+A+ ++ + G+
Sbjct: 104 KALAEAAREAGL 115
>gi|408380596|ref|ZP_11178180.1| 50S ribosomal protein L18 [Agrobacterium albertimagni AOL15]
gi|407745809|gb|EKF57341.1| 50S ribosomal protein L18 [Agrobacterium albertimagni AOL15]
Length = 120
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
+ VA P L V S + + A + V K +A A T +K L++ +DI A A+G
Sbjct: 20 KAVANGRP-RLSVHRSSKNIYAQIIDDVAGKTLAAASTLDGGLKGELKTGADIAAATAVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 79 KLVAERAVKAGVKEVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|291549403|emb|CBL25665.1| LSU ribosomal protein L18P [Ruminococcus torques L2-14]
Length = 122
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH+ + R + L VF S + A + + A T K++
Sbjct: 4 KKSRSEVRRKKHMKLRNRFSGTAQRPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKEV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +D+ A +G+++AERA+ + + +R F +GKI+A+ + + G+
Sbjct: 64 KAELEKTNDVEAAAYLGKVIAERAKAKGIDEVVF---DRGGFIYQGKIKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|157818901|ref|NP_001099675.1| 39S ribosomal protein L18, mitochondrial [Rattus norvegicus]
gi|149027454|gb|EDL83044.1| mitochondrial ribosomal protein L18 (predicted) [Rattus norvegicus]
gi|187469792|gb|AAI67033.1| Mitochondrial ribosomal protein L18 [Rattus norvegicus]
Length = 180
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 76 ISFKQRTVAYMEP-----FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSR 130
++ K+R A + P L V ++ V A + H + + V A T IK L S
Sbjct: 61 VARKERGWATVWPNREFWHRLRVVKTQHHVEAFVEH-LNGQVVVSASTREWAIKKHLYST 119
Query: 131 SDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
++ AC ++GR+LA+R EA + Y P + I+ + ++ ++G+ ++
Sbjct: 120 RNVVACESVGRVLAQRCLEAGINFMVYQPTPWEASSDSIKRLQNAMTESGVMLR 173
>gi|386717234|ref|YP_006183560.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia D457]
gi|384076796|emb|CCH11381.1| LSU ribosomal protein L18p (L5e) [Stenotrophomonas maltophilia
D457]
Length = 117
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A +GRI+AERA+ A V ++ R ++ G+I
Sbjct: 45 SKVLAAANTTQTDVKEGLKNGKNADAAAKVGRIVAERAKAAGVEKVAF-DRSGYRYHGRI 103
Query: 170 RAVVQSLIDNGID 182
+A+ ++ + G+
Sbjct: 104 KALAEAAREAGLQ 116
>gi|6841380|gb|AAF29043.1|AF161556_1 HSPC071 [Homo sapiens]
gi|119568000|gb|EAW47615.1| mitochondrial ribosomal protein L18, isoform CRA_b [Homo sapiens]
gi|158258731|dbj|BAF85336.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|387928094|ref|ZP_10130772.1| 50S ribosomal protein L18 [Bacillus methanolicus PB1]
gi|387587680|gb|EIJ80002.1| 50S ribosomal protein L18 [Bacillus methanolicus PB1]
Length = 120
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L+VF S + + A L V +A A T KD+ L S ++I A +G ++A+RA E
Sbjct: 31 LNVFRSNKHIYAQLIDDVNGVTIASASTLDKDLN--LESTANIEAAQKVGELVAKRAVEK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ T + R + G+++A+ ++ +NG++
Sbjct: 89 GIKTVVF-DRGGYLYHGRVKALAEAARENGLE 119
>gi|421586942|ref|ZP_16032413.1| 50S ribosomal protein L18 [Rhizobium sp. Pop5]
gi|403708723|gb|EJZ23322.1| 50S ribosomal protein L18 [Rhizobium sp. Pop5]
Length = 120
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQIIDDVAGKTLASASTLEKDLRGSLKTGADTAAAAVVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ + + G+
Sbjct: 79 KLVAERASKAGVTEVVF---DRGAFIYHGRIKALADAAREGGL 118
>gi|21265080|ref|NP_054880.2| 39S ribosomal protein L18, mitochondrial [Homo sapiens]
gi|114610053|ref|XP_001150906.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Pan
troglodytes]
gi|397471746|ref|XP_003807443.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Pan paniscus]
gi|41017797|sp|Q9H0U6.1|RM18_HUMAN RecName: Full=39S ribosomal protein L18, mitochondrial;
Short=L18mt; Short=MRP-L18; Flags: Precursor
gi|12052792|emb|CAB66568.1| hypothetical protein [Homo sapiens]
gi|12804435|gb|AAH01623.1| Mitochondrial ribosomal protein L18 [Homo sapiens]
gi|49065408|emb|CAG38522.1| MRPL18 [Homo sapiens]
gi|117646366|emb|CAL38650.1| hypothetical protein [synthetic construct]
gi|261859654|dbj|BAI46349.1| mitochondrial ribosomal protein L18 [synthetic construct]
gi|410212632|gb|JAA03535.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
gi|410257362|gb|JAA16648.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
gi|410296778|gb|JAA26989.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
gi|410342039|gb|JAA39966.1| mitochondrial ribosomal protein L18 [Pan troglodytes]
Length = 180
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 81 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 173
>gi|392373639|ref|YP_003205472.1| 50S ribosomal protein L18 [Candidatus Methylomirabilis oxyfera]
gi|258591332|emb|CBE67631.1| 50S ribosomal subunit protein L18 [Candidatus Methylomirabilis
oxyfera]
Length = 122
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S R + A + K +A A T S++I+ + S A A+G +LA +A A
Sbjct: 31 LCVFRSARHIYAQIVDDEQGKTLAAASTLSREIREQGKMESKTAAARAVGELLATKALAA 90
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
D+ + R KF G+++A+ L + G+ +
Sbjct: 91 DISRVVF-DRGGFKFHGRVKALAVGLGEKGVKL 122
>gi|332245321|ref|XP_003271809.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Nomascus
leucogenys]
Length = 179
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 172
>gi|406982946|gb|EKE04206.1| hypothetical protein ACD_20C00097G0023 [uncultured bacterium]
Length = 122
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + VA AGT +K L DI A +G++LAERA++A
Sbjct: 31 LSVYRSNKHIYAQIIDDIKGVTVASAGTTEPTLKERLPHGGDIDAAKEVGKLLAERAKKA 90
Query: 151 DVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
V + + +R F G+I A+ + + G+
Sbjct: 91 GVESVVF---DRGGFLYHGRIAALADAAREGGL 120
>gi|456062403|ref|YP_007501373.1| ribosomal protein L18 [beta proteobacterium CB]
gi|455439700|gb|AGG32638.1| ribosomal protein L18 [beta proteobacterium CB]
Length = 117
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S +SA + +K VA A T KD++ +++ + A IG+++AERA +A
Sbjct: 26 LTVIRSNSHISAQVYSPCGTKVVAAASTMEKDLRQAIKNGGNADAAKQIGKLVAERAVKA 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ ++ R ++ G+I+A+ ++ + G+
Sbjct: 86 GIVDVAF-DRSGHRYHGRIKALAEAAREAGL 115
>gi|405376558|ref|ZP_11030512.1| ribosomal protein L18, bacterial type [Rhizobium sp. CF142]
gi|424890763|ref|ZP_18314362.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393172981|gb|EJC73026.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|397326885|gb|EJJ31196.1| ribosomal protein L18, bacterial type [Rhizobium sp. CF142]
Length = 120
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQVIDDVAGKTLAAASTLDKDLRGSLKTGADTAAAALVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ + + G+
Sbjct: 79 KLVAERASKAGVTEVVF---DRGAFIYHGRIKALADAAREGGL 118
>gi|378825683|ref|YP_005188415.1| 50S ribosomal protein L18 [Sinorhizobium fredii HH103]
gi|365178735|emb|CCE95590.1| 50S ribosomal protein L18 [Sinorhizobium fredii HH103]
Length = 120
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
+ VA P L V S + + A + V K +A A T D+K+ L++ +D A A+G
Sbjct: 20 KAVANGRP-RLSVHRSSKNIYAQIIDDVAGKTIAAASTLEADLKSALKTGADTAAAAAVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
++LAERA +A V + +R F G+++A+ ++ + G++
Sbjct: 79 KLLAERASKAGVKDVVF---DRGAFIYHGRVKALAEAAREGGLN 119
>gi|407716956|ref|YP_006838236.1| 50S ribosomal protein L18 [Cycloclasticus sp. P1]
gi|407257292|gb|AFT67733.1| 50S ribosomal protein L18 [Cycloclasticus sp. P1]
Length = 117
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S R + A + SK + A T DIK+ +++ +I A +G+ +AERA EA
Sbjct: 26 LSVHRSPRHIYAQVMTADGSKVLVSASTLLSDIKSSVKNCGNIEAASVVGKTIAERAVEA 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ ++ R K+ G+++A+ + +NG++
Sbjct: 86 GIKEVAF-DRSGYKYHGRVKALADAARENGLE 116
>gi|195485219|ref|XP_002091000.1| mRpL18 [Drosophila yakuba]
gi|194177101|gb|EDW90712.1| mRpL18 [Drosophila yakuba]
Length = 186
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAR 148
TL++ S R+VSA + H + + A T+ IK L +D A + +GR+LA R
Sbjct: 61 HTLEINSSGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTNDTAAFVNLGRVLAHRCL 119
Query: 149 EADVYTASYTPRERDKFEG-KIRAVVQSLIDNGIDVK 184
++ + + + +G K++ ++Q+L DNG+ K
Sbjct: 120 QSGITEMTCN---VEAVQGSKLQKLLQTLQDNGVSFK 153
>gi|209548951|ref|YP_002280868.1| 50S ribosomal protein L18 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|424894653|ref|ZP_18318227.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|226723368|sp|B5ZYV1.1|RL18_RHILW RecName: Full=50S ribosomal protein L18
gi|209534707|gb|ACI54642.1| ribosomal protein L18 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|393178880|gb|EJC78919.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 120
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + A + V K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYAQVIDDVAGKTLAAASTLDKDLRGSLKTGADTAAAALVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ + + G+
Sbjct: 79 KLVAERASKAGVTDVVF---DRGAFIYHGRIKALADAAREGGL 118
>gi|38048461|gb|AAR10133.1| similar to Drosophila melanogaster CG12373, partial [Drosophila
yakuba]
Length = 186
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAR 148
TL++ S R+VSA + H + + A T+ IK L +D A + +GR+LA R
Sbjct: 61 HTLEINSSGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTNDTAAFVNLGRVLAHRCL 119
Query: 149 EADVYTASYTPRERDKFEG-KIRAVVQSLIDNGIDVK 184
++ + + + +G K++ ++Q+L DNG+ K
Sbjct: 120 QSGITEMTCN---VEAVQGSKLQKLLQTLQDNGVSFK 153
>gi|405973686|gb|EKC38383.1| Polycystic kidney disease protein 1-like 2 [Crassostrea gigas]
Length = 1565
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 70 KNTTKHIS-FKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLR 128
+N TK +S F R E F + F+ K +VS T+++V + TNS DIK L
Sbjct: 23 ENMTKSVSTFDGRVSFPAEYFAAEEFVMKLYVSKEGRVNSTTQRVKIKLTNSTDIKGQLD 82
Query: 129 SRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLD 188
+ S I C ++ R +A + E + + T ++++ ++R + L+DN D LD
Sbjct: 83 AMSSIKDCGSLLRAVAVVSGEF-LTGGNDTSDDQEEELTEVREFMTGLLDNLADKTENLD 141
>gi|296199559|ref|XP_002747209.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Callithrix
jacchus]
Length = 180
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC ++GR+LA+R EA
Sbjct: 81 LRVIRTQHHVEAFVEHQ-NGKVVVSASTREWAIKKYLYSTRNVVACESVGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|358638970|dbj|BAL26267.1| 50S ribosomal protein L18 [Azoarcus sp. KH32C]
Length = 117
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + S+ +A A T D+++ L + A +G++
Sbjct: 18 IAELKAVRLTVFRSNSHIYAQVIAGCGSRVLASASTLEADVRSQLSHGGNKAAAQLVGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AERA+ A + T ++ R ++ G+++A+ ++ + G+
Sbjct: 78 IAERAKAAGIETVAF-DRAGFQYHGRVQALAEAAREGGL 115
>gi|83854957|ref|ZP_00948487.1| ribosomal protein L18 [Sulfitobacter sp. NAS-14.1]
gi|83941479|ref|ZP_00953941.1| ribosomal protein L18 [Sulfitobacter sp. EE-36]
gi|83842800|gb|EAP81967.1| ribosomal protein L18 [Sulfitobacter sp. NAS-14.1]
gi|83847299|gb|EAP85174.1| ribosomal protein L18 [Sulfitobacter sp. EE-36]
Length = 119
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAR 148
L V S + +SA L V +A A + KD+ V +++I A +G +AERA+
Sbjct: 28 LRLSVHRSNKNISAQLIDDVNGVTLASASSMEKDLGVV--GKNNIEAATKVGSAIAERAK 85
Query: 149 EADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+A V A Y R F GKI+A+ + + G+ +
Sbjct: 86 KAGVSEA-YFDRGGFLFHGKIKALADAAREGGLKI 119
>gi|198413270|ref|XP_002120895.1| PREDICTED: similar to mitochondrial ribosomal protein L18 [Ciona
intestinalis]
Length = 214
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 95 ISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYT 154
++ + ASL H ++ VAV+ T I+ +L +D+ AC IG I AER A +
Sbjct: 99 VTGKHTYASLLHYHGNQVVAVS-TREWSIQKMLYKGNDVSACYNIGTIFAERCIRAGISC 157
Query: 155 ASYT-PRERDKFEGKIRAVVQSLIDNG 180
A++T P+ +I++ ++++ G
Sbjct: 158 AAWTIPQNMVDNSDRIKSFCTAVVETG 184
>gi|395793283|ref|ZP_10472688.1| 50S ribosomal protein L18 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713053|ref|ZP_17687313.1| 50S ribosomal protein L18 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395424679|gb|EJF90859.1| 50S ribosomal protein L18 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395431597|gb|EJF97615.1| 50S ribosomal protein L18 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 120
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S +D A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLRGCTLVSASTLEGDLKKSLKSGADKEAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G++RA+ ++ + G+
Sbjct: 89 GVSQVVF-DRGAYVYHGRVRALAEAAREGGL 118
>gi|297679542|ref|XP_002817585.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Pongo abelii]
Length = 180
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 81 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLRSAMTEGGVVLR 173
>gi|336436025|ref|ZP_08615738.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_4_56FAA]
gi|336008065|gb|EGN38084.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 1_4_56FAA]
Length = 122
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH+ + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRRKKHMKLRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVAASTLQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G+++AE+A + + +R F +GKI+A+ + + G+
Sbjct: 64 KAELEKTNNVDAAAYLGKVIAEKAMAKGITEVVF---DRGGFIYQGKIKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|405967153|gb|EKC32353.1| 39S ribosomal protein L18, mitochondrial [Crassostrea gigas]
Length = 187
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 100 VSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTP 159
+ A L H + ++V A + I+ L S D+ A + +GR+ AER +A + +A Y P
Sbjct: 70 IEAILEHS-SGRKVVSASSAEWAIRQFLYSGRDLSAAVNLGRVFAERCLKAGIVSAFYDP 128
Query: 160 RERDKFEGKIRAVVQSLIDNGIDV 183
K++ ++++L + GI +
Sbjct: 129 NTDVHGSEKVKVILKALEEAGIQI 152
>gi|389843573|ref|YP_006345653.1| 50S ribosomal protein L18 [Mesotoga prima MesG1.Ag.4.2]
gi|387858319|gb|AFK06410.1| ribosomal protein L18, bacterial type [Mesotoga prima MesG1.Ag.4.2]
Length = 122
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 65 KEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
K+KK + +H+ + E L VF S++ + A L + A T KD+K
Sbjct: 5 KDKKEQRRKRHLRVRSTVSGTPERPRLAVFRSEKHIYAQLIDDSKGITLVSASTVDKDVK 64
Query: 125 AVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A + ++ A +G +LA++A++ + + + R KF G+I+++ + G+
Sbjct: 65 ASIEKSWNVDAAKKVGELLAKKAKDKGISSVVF-DRGGFKFHGRIKSLAEGARAGGL 120
>gi|407804470|ref|ZP_11151292.1| 50S ribosomal protein L18 [Alcanivorax sp. W11-5]
gi|407021568|gb|EKE33334.1| 50S ribosomal protein L18 [Alcanivorax sp. W11-5]
Length = 116
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R + A +T K +A A T KD++ +D A +A+G+++AERA+ A
Sbjct: 27 LCVHRTPRHIYAQVTTAAGDKVLASASTVEKDLRGSATGNAD--AAVAVGKLIAERAKAA 84
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V ++ R K+ G+++A+ + +NG++
Sbjct: 85 GVERVAF-DRSGFKYHGRVKALADAARENGLE 115
>gi|119567999|gb|EAW47614.1| mitochondrial ribosomal protein L18, isoform CRA_a [Homo sapiens]
Length = 208
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC +IGR+LA+R EA
Sbjct: 109 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEA 167
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 168 GINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLR 201
>gi|114561352|ref|YP_748865.1| 50S ribosomal protein L18 [Shewanella frigidimarina NCIMB 400]
gi|122301102|sp|Q089N8.1|RL18_SHEFN RecName: Full=50S ribosomal protein L18
gi|114332645|gb|ABI70027.1| LSU ribosomal protein L18P [Shewanella frigidimarina NCIMB 400]
Length = 116
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
+AVA T K +K +L+S ++ A A+G+I+AERA E V T ++ R K+ G++
Sbjct: 47 LAVASTVEKAVKELLKSTGNVDAAKAVGKIVAERAIEKGVATVAF-DRSGFKYHGRV 102
>gi|220921915|ref|YP_002497216.1| 50S ribosomal protein L18 [Methylobacterium nodulans ORS 2060]
gi|254799736|sp|B8ISA1.1|RL18_METNO RecName: Full=50S ribosomal protein L18
gi|219946521|gb|ACL56913.1| ribosomal protein L18 [Methylobacterium nodulans ORS 2060]
Length = 120
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + + +A A + KD++A L++ +D A +G+++AERA+ A
Sbjct: 29 LSVFRSSKQIYVQVIDDANGRTLAAASSLDKDLRARLKTGADKAAAAEVGKLVAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V T R + G+++A+ + + G+D
Sbjct: 89 GV-TKVIFDRSGYLYHGRVKALADAAREGGLD 119
>gi|395779770|ref|ZP_10460239.1| 50S ribosomal protein L18 [Bartonella washoensis 085-0475]
gi|423712856|ref|ZP_17687154.1| 50S ribosomal protein L18 [Bartonella washoensis Sb944nv]
gi|395410552|gb|EJF77106.1| 50S ribosomal protein L18 [Bartonella washoensis Sb944nv]
gi|395420145|gb|EJF86430.1| 50S ribosomal protein L18 [Bartonella washoensis 085-0475]
Length = 120
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S SD A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLRGCTLVSASTLEGDLKKSLKSGSDKEAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGLN 119
>gi|241759605|ref|ZP_04757706.1| ribosomal protein L18 [Neisseria flavescens SK114]
gi|261400068|ref|ZP_05986193.1| ribosomal protein L18 [Neisseria lactamica ATCC 23970]
gi|421863381|ref|ZP_16295079.1| 50S ribosomal protein L18 [Neisseria lactamica Y92-1009]
gi|241319977|gb|EER56358.1| ribosomal protein L18 [Neisseria flavescens SK114]
gi|269210294|gb|EEZ76749.1| ribosomal protein L18 [Neisseria lactamica ATCC 23970]
gi|309379143|emb|CBX22274.1| 50S ribosomal protein L18 [Neisseria lactamica Y92-1009]
Length = 117
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T ++++ L+S S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRSSLKSGSNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ A V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAAGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|114704500|ref|ZP_01437408.1| 50S ribosomal protein L18 [Fulvimarina pelagi HTCC2506]
gi|114539285|gb|EAU42405.1| 50S ribosomal protein L18 [Fulvimarina pelagi HTCC2506]
Length = 120
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + + A + + +A A + +K L++ +D+ A A+G+++AERA+EA
Sbjct: 29 LSVHRSSKHIYAQIIDDSVGRTLAAASSLDPKLKGDLKTGADVEAATAVGKLVAERAKEA 88
Query: 151 DVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
+ + +R F G+++AV + + G++
Sbjct: 89 GISDVVF---DRGAFIYHGRVKAVAEGAREGGLN 119
>gi|297537547|ref|YP_003673316.1| 50S ribosomal protein L18 [Methylotenera versatilis 301]
gi|297256894|gb|ADI28739.1| ribosomal protein L18 [Methylotenera versatilis 301]
Length = 117
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L V + A + K + A T D++ +++ ++ A AIG++
Sbjct: 18 IAELKVTRLSVHRTNLHTYAQIIDATGGKVIVSASTVEADVRKNIKNGGNVEAAAAIGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A +A V T ++ R K+ G+I+A+ + +NG+
Sbjct: 78 IAEKAVKAGVTTVAF-DRSGYKYHGRIKALADAARENGL 115
>gi|344206197|ref|YP_004791338.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia JV3]
gi|343777559|gb|AEM50112.1| ribosomal protein L18 [Stenotrophomonas maltophilia JV3]
Length = 117
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A +GRI+AERA+ A + ++ R ++ G+I
Sbjct: 45 SKVLAAANTTQTDVKEGLKNGKNADAAAKVGRIVAERAKAAGIEKVAF-DRSGYRYHGRI 103
Query: 170 RAVVQSLIDNGID 182
+A+ ++ + G+
Sbjct: 104 KALAEAAREAGLQ 116
>gi|398353259|ref|YP_006398723.1| 50S ribosomal protein L18 [Sinorhizobium fredii USDA 257]
gi|390128585|gb|AFL51966.1| 50S ribosomal protein L18 [Sinorhizobium fredii USDA 257]
Length = 120
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
+ VA P L V S + + A + V K +A A T D+K L++ +D A A+G
Sbjct: 20 KAVANGRP-RLSVHRSSKNIYAQIIDDVAGKTIAAASTLEADLKTALKTGADTAAAAAVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
++LAERA +A V + +R F G+++A+ ++ + G++
Sbjct: 79 KLLAERASKAGVKDVVF---DRGAFIYHGRVKALAEAAREGGLN 119
>gi|432111778|gb|ELK34823.1| 39S ribosomal protein L18, mitochondrial [Myotis davidii]
Length = 180
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + HR + V A T IK L S ++ AC IGR+LAER EA
Sbjct: 81 LRVIRTQHHVEALVEHR-NGQVVVSASTREWAIKKHLYSTKNVAACENIGRVLAERCLEA 139
Query: 151 DVYTASYTP 159
+ Y P
Sbjct: 140 GINFMVYQP 148
>gi|412985904|emb|CCO17104.1| unknown protein [Bathycoccus prasinos]
Length = 167
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 22/78 (28%)
Query: 127 LRSRSDIPACLAIGRILAER------------------AREADVYT---ASYTPRERDKF 165
L S SD AC IG++LAER +++ + Y+ AS+ P+ R +F
Sbjct: 90 LASTSDKSACKHIGKLLAERLKKIQLDAINFEGLQSSTSKKNEKYSGRRASFQPK-RKRF 148
Query: 166 EGKIRAVVQSLIDNGIDV 183
GK+ A+++SL +NG+++
Sbjct: 149 GGKLSALLESLKENGVEI 166
>gi|392952492|ref|ZP_10318047.1| 50S ribosomal protein L18 [Hydrocarboniphaga effusa AP103]
gi|391861454|gb|EIT71982.1| 50S ribosomal protein L18 [Hydrocarboniphaga effusa AP103]
Length = 118
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+ F L V + R + A + S V A T K++ + L ++ A IG+++AE
Sbjct: 22 LGAFRLAVHRTPRHIYAQIIAPDASNTVVSASTVEKEVASALEGTGNVEAAKKIGQLIAE 81
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A + TA R K+ G+I+A+ + + G++
Sbjct: 82 RAKAAGI-TAVAFDRAGFKYHGRIKALADAAREAGLE 117
>gi|354481837|ref|XP_003503107.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like
[Cricetulus griseus]
Length = 180
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 76 ISFKQRTVAYMEP-----FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSR 130
++ K+R A + P L V ++ + A + H+ + V A T IK L +
Sbjct: 61 VARKERGWATVWPNREFWHRLRVIKTQHHIEALVEHQ-NGQVVVSASTREWAIKKHLYNT 119
Query: 131 SDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
++ AC +IGR+LA+R EA + Y P + ++++ ++ ++G+
Sbjct: 120 RNVVACESIGRVLAQRCLEAGINFMVYQPTPWEASSDSLKSLQNAMTESGV 170
>gi|195155173|ref|XP_002018481.1| GL16737 [Drosophila persimilis]
gi|198459121|ref|XP_001361264.2| GA11589 [Drosophila pseudoobscura pseudoobscura]
gi|194114277|gb|EDW36320.1| GL16737 [Drosophila persimilis]
gi|198136580|gb|EAL25842.2| GA11589 [Drosophila pseudoobscura pseudoobscura]
Length = 195
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VSA + H + + A T IK L +D A + +GR+LA R +
Sbjct: 62 TLEINTSGRYVSADVKH-YENGVILSASTAEWAIKQQLYKTNDTSAFVNLGRVLAHRCLQ 120
Query: 150 ADVYTASYTPRERDKFEG-KIRAVVQSLIDNGIDVK 184
+ + + D G K++ ++Q+L DNG+ K
Sbjct: 121 SGITEMTCN---VDAVAGSKLQKLLQTLQDNGVSFK 153
>gi|304321456|ref|YP_003855099.1| 50S ribosomal protein L18 [Parvularcula bermudensis HTCC2503]
gi|303300358|gb|ADM09957.1| putative 50s ribosomal protein l18 [Parvularcula bermudensis
HTCC2503]
Length = 121
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + ++A + K +A A + KD KA SDI A +G ++A RA+EA
Sbjct: 30 LSVFRSAKNIAAQIIDDRAGKTLAAASSLEKDFKAEQAKGSDIDAAAKVGALIAARAKEA 89
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R F G+++A+ + + G+
Sbjct: 90 GIEDVVF-DRGGYIFHGRVKALADAAREGGL 119
>gi|206901496|ref|YP_002250717.1| 50S ribosomal protein L18 [Dictyoglomus thermophilum H-6-12]
gi|226723314|sp|B5YDV9.1|RL18_DICT6 RecName: Full=50S ribosomal protein L18
gi|206740599|gb|ACI19657.1| ribosomal protein L18 [Dictyoglomus thermophilum H-6-12]
Length = 122
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K+ +K +H+ +++ + E L V+ S R++ A + + A + K+I
Sbjct: 4 KRSRKELRKIRHLRIRKKIIGTSERPRLAVYKSLRYIYAQIIDDTKGHTLVSASSLEKEI 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
++ L+S +I A +G ++A+RA E + + +R F GK++A+ S G+
Sbjct: 64 RSQLKSTKNIEAAKLVGEVIAKRALEKGIKKVVF---DRGGFLYHGKVKALADSARAAGL 120
Query: 182 D 182
+
Sbjct: 121 E 121
>gi|424914470|ref|ZP_18337834.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850646|gb|EJB03167.1| ribosomal protein L18, bacterial type [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 120
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + + A + V K +A A T KD++ L++ +D A +G+++AERA +A
Sbjct: 29 LSVHRSSKNIYAQVIDDVAGKTLAAASTLDKDLRGSLKTGADTAAAALVGKLVAERASKA 88
Query: 151 DVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
V + +R F G+I+A+ + + G+
Sbjct: 89 GVTDVVF---DRGAFIYHGRIKALADAAREGGL 118
>gi|109897330|ref|YP_660585.1| 50S ribosomal protein L18 [Pseudoalteromonas atlantica T6c]
gi|332307754|ref|YP_004435605.1| 50S ribosomal protein L18 [Glaciecola sp. 4H-3-7+YE-5]
gi|410617417|ref|ZP_11328385.1| large subunit ribosomal protein L18 [Glaciecola polaris LMG 21857]
gi|410624857|ref|ZP_11335646.1| large subunit ribosomal protein L18 [Glaciecola mesophila KMM 241]
gi|410642228|ref|ZP_11352743.1| large subunit ribosomal protein L18 [Glaciecola chathamensis S18K6]
gi|410644993|ref|ZP_11355462.1| large subunit ribosomal protein L18 [Glaciecola agarilytica NO2]
gi|122972202|sp|Q15X57.1|RL18_PSEA6 RecName: Full=50S ribosomal protein L18
gi|109699611|gb|ABG39531.1| LSU ribosomal protein L18P [Pseudoalteromonas atlantica T6c]
gi|332175083|gb|AEE24337.1| ribosomal protein L18 [Glaciecola sp. 4H-3-7+YE-5]
gi|410135503|dbj|GAC03861.1| large subunit ribosomal protein L18 [Glaciecola agarilytica NO2]
gi|410138178|dbj|GAC10930.1| large subunit ribosomal protein L18 [Glaciecola chathamensis S18K6]
gi|410155384|dbj|GAC22415.1| large subunit ribosomal protein L18 [Glaciecola mesophila KMM 241]
gi|410162980|dbj|GAC32523.1| large subunit ribosomal protein L18 [Glaciecola polaris LMG 21857]
Length = 117
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 98 RFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASY 157
R + A L S+ +A A T D++ ++S + A +A+G+ +AERA E + T ++
Sbjct: 33 RHIYAQLIAPCGSQVLAAASTVEADLRTTVKSTGNAEAAVAVGKAIAERAIEKGIKTVAF 92
Query: 158 TPRERDKFEGKIRAVVQSLIDNGI 181
R K+ G+++A+ + + G+
Sbjct: 93 -DRSGFKYHGRVKALADAAREAGL 115
>gi|313667457|ref|YP_004047741.1| 50S ribosomal protein L18 [Neisseria lactamica 020-06]
gi|313004919|emb|CBN86345.1| 50S ribosomal protein L18 [Neisseria lactamica 020-06]
Length = 95
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + A + K +A A T ++++ L+S S++ A +G+ +AE+A+ A
Sbjct: 4 LCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRSSLKSGSNVEAAAVVGKRIAEKAKAA 63
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V ++ R ++ G+++A+ ++ +NG+
Sbjct: 64 GVEKVAF-DRSGFQYHGRVKALAEAARENGLS 94
>gi|154483172|ref|ZP_02025620.1| hypothetical protein EUBVEN_00873 [Eubacterium ventriosum ATCC
27560]
gi|149735980|gb|EDM51866.1| ribosomal protein L18 [Eubacterium ventriosum ATCC 27560]
Length = 122
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH + E L VF S + A + K + A TN +
Sbjct: 4 KKSRSEVRVKKHNRLRNHLSGTTECPRLAVFRSNNHMYAQIIDDTVGKTLVSASTNEPEA 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
K L +++ A +G+++AERA E + Y +R F +GK++A+ + + G+
Sbjct: 64 KKALEKTNNVEAAAYVGKVIAERAIEKGIKEVVY---DRGGFIYQGKVQALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 E 121
>gi|56695415|ref|YP_165763.1| 50S ribosomal protein L18 [Ruegeria pomeroyi DSS-3]
gi|73621692|sp|Q5LW42.1|RL18_SILPO RecName: Full=50S ribosomal protein L18
gi|56677152|gb|AAV93818.1| ribosomal protein L18 [Ruegeria pomeroyi DSS-3]
Length = 119
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAR 148
L V S + +SA L V +A A T KD+ V ++++ A +G +AERA+
Sbjct: 28 LRLSVHRSNKNISAQLIDDVRGVTLAAASTMEKDLGVV--GKNNVEAAKKVGAAIAERAK 85
Query: 149 EADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+A V A Y R F GK++A+ + + G+ +
Sbjct: 86 KAGVEEA-YFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|190891371|ref|YP_001977913.1| 50S ribosomal protein L18 [Rhizobium etli CIAT 652]
gi|417103133|ref|ZP_11960991.1| 50S ribosomal protein L18 [Rhizobium etli CNPAF512]
gi|226723367|sp|B3PWT7.1|RL18_RHIE6 RecName: Full=50S ribosomal protein L18
gi|190696650|gb|ACE90735.1| 50S ribosomal protein L18 [Rhizobium etli CIAT 652]
gi|327191401|gb|EGE58427.1| 50S ribosomal protein L18 [Rhizobium etli CNPAF512]
Length = 120
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 67 KKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAV 126
+++ +HI ++VA P L V S + + A + V K +A A T KD++
Sbjct: 10 RRANRVRRHI----KSVANGRP-RLSVHRSSKNIYAQIIDDVAGKTLASASTLEKDLRGS 64
Query: 127 LRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
L++ +D A A+G+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 65 LKTGADTAAAAAVGKLVAERASKAGVSEVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|407002309|gb|EKE19102.1| 50S ribosomal protein L18 [uncultured bacterium]
Length = 120
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 80 QRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAI 139
+ T+ + L +F S + A + SK + A + KDIK+ L +I A +
Sbjct: 18 RHTINRLGEKRLSIFRSSNHIYAQVFSSCGSKVLVSAASVEKDIKSALNHCGNIKAAQLV 77
Query: 140 GRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
G++LAER + A ++ R + G ++A+ ++ + GI
Sbjct: 78 GKLLAERCKNAGFEKIAF-DRSGYSYHGCVKALAEAAREGGIQ 119
>gi|403251559|ref|ZP_10917892.1| ribosomal protein L18 [actinobacterium SCGC AAA027-L06]
gi|402915104|gb|EJX36094.1| ribosomal protein L18 [actinobacterium SCGC AAA027-L06]
Length = 125
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
+H ++R V + L V S R + + TSK +A A T K+++A ++
Sbjct: 19 RHFRLRKRVVGTADRPRLVVSRSARHLFVQVVDDSTSKTLASASTMEKELRAFAGDKT-- 76
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+G ++A+RA+E + T + R +KF G++ AV S NG++
Sbjct: 77 AKAKQVGELIAKRAKEKGISTVVF-DRGGNKFHGRVAAVATSARANGLE 124
>gi|46205399|ref|ZP_00048588.2| COG0256: Ribosomal protein L18 [Magnetospirillum magnetotacticum
MS-1]
Length = 104
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
RT A P L VF S + + + + +A A + KD++ L++ +D A A+G
Sbjct: 20 RTAANGRP-RLSVFRSSKQIYVQVIDDAAGRTLAAASSLDKDLRTSLKTGADKAAAEAVG 78
Query: 141 RILAERAREADVYTASYTPR 160
+++AERA+ A V + PR
Sbjct: 79 KLVAERAKAAGVTKVIFXPR 98
>gi|49475778|ref|YP_033819.1| 50S ribosomal protein L18 [Bartonella henselae str. Houston-1]
gi|73621560|sp|Q6G2Y1.1|RL18_BARHE RecName: Full=50S ribosomal protein L18
gi|49238585|emb|CAF27826.1| 50S ribosomal protein l18 [Bartonella henselae str. Houston-1]
Length = 120
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L ++ S + + A + + + A T D+K L+S SD A A+G+++AERA++A
Sbjct: 29 LSIYRSNQNIYAQIIDDLRGCTLVSASTLDGDLKKSLKSGSDKEAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGLN 119
>gi|15676085|ref|NP_273216.1| 50S ribosomal protein L18 [Neisseria meningitidis MC58]
gi|59802144|ref|YP_208856.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae FA 1090]
gi|121634032|ref|YP_974277.1| 50S ribosomal protein L18 [Neisseria meningitidis FAM18]
gi|161870901|ref|YP_001600079.1| 50S ribosomal protein L18 [Neisseria meningitidis 053442]
gi|218767152|ref|YP_002341664.1| 50S ribosomal protein L18 [Neisseria meningitidis Z2491]
gi|240015080|ref|ZP_04721993.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae DGI18]
gi|240017529|ref|ZP_04724069.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae FA6140]
gi|240122152|ref|ZP_04735114.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID24-1]
gi|254494705|ref|ZP_05107876.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae 1291]
gi|254805798|ref|YP_003084019.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha14]
gi|268593792|ref|ZP_06127959.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae 35/02]
gi|268597769|ref|ZP_06131936.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae FA19]
gi|268600014|ref|ZP_06134181.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae MS11]
gi|268602352|ref|ZP_06136519.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID18]
gi|268604615|ref|ZP_06138782.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID1]
gi|268683073|ref|ZP_06149935.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID332]
gi|268683261|ref|ZP_06150123.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae SK-92-679]
gi|268687503|ref|ZP_06154365.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae SK-93-1035]
gi|291042793|ref|ZP_06568534.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae DGI2]
gi|293398186|ref|ZP_06642391.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae F62]
gi|296313381|ref|ZP_06863322.1| ribosomal protein L18 [Neisseria polysaccharea ATCC 43768]
gi|304388959|ref|ZP_07371006.1| 50S ribosomal protein L18 [Neisseria meningitidis ATCC 13091]
gi|385323307|ref|YP_005877746.1| 50S ribosomal protein L18 [Neisseria meningitidis 8013]
gi|385327522|ref|YP_005881825.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha710]
gi|385338944|ref|YP_005892817.1| 50S ribosomal protein L18 [Neisseria meningitidis WUE 2594]
gi|385339201|ref|YP_005893073.1| 50S ribosomal protein L18 [Neisseria meningitidis G2136]
gi|385342801|ref|YP_005896672.1| 50S ribosomal protein L18 [Neisseria meningitidis M01-240149]
gi|385850428|ref|YP_005896943.1| 50S ribosomal protein L18 [Neisseria meningitidis M04-240196]
gi|385852367|ref|YP_005898881.1| 50S ribosomal protein L18 [Neisseria meningitidis H44/76]
gi|385854337|ref|YP_005900850.1| 50S ribosomal protein L18 [Neisseria meningitidis M01-240355]
gi|385856306|ref|YP_005902818.1| 50S ribosomal protein L18 [Neisseria meningitidis NZ-05/33]
gi|416159249|ref|ZP_11605714.1| ribosomal protein L18 [Neisseria meningitidis N1568]
gi|416181261|ref|ZP_11611557.1| ribosomal protein L18 [Neisseria meningitidis M13399]
gi|416186104|ref|ZP_11613553.1| ribosomal protein L18 [Neisseria meningitidis M0579]
gi|416194740|ref|ZP_11617457.1| ribosomal protein L18 [Neisseria meningitidis CU385]
gi|416199857|ref|ZP_11619497.1| ribosomal protein L18 [Neisseria meningitidis 961-5945]
gi|416211558|ref|ZP_11621427.1| ribosomal protein L18 [Neisseria meningitidis M01-240013]
gi|418287373|ref|ZP_12899982.1| ribosomal protein L18 [Neisseria meningitidis NM233]
gi|418289595|ref|ZP_12901860.1| ribosomal protein L18 [Neisseria meningitidis NM220]
gi|421537197|ref|ZP_15983385.1| ribosomal protein L18 [Neisseria meningitidis 93003]
gi|421539353|ref|ZP_15985515.1| ribosomal protein L18 [Neisseria meningitidis 93004]
gi|421541501|ref|ZP_15987618.1| ribosomal protein L18 [Neisseria meningitidis NM255]
gi|421543560|ref|ZP_15989651.1| ribosomal protein L18 [Neisseria meningitidis NM140]
gi|421545619|ref|ZP_15991679.1| ribosomal protein L18 [Neisseria meningitidis NM183]
gi|421547689|ref|ZP_15993721.1| ribosomal protein L18 [Neisseria meningitidis NM2781]
gi|421549718|ref|ZP_15995728.1| ribosomal protein L18 [Neisseria meningitidis 69166]
gi|421551899|ref|ZP_15997880.1| ribosomal protein L18 [Neisseria meningitidis NM576]
gi|421553906|ref|ZP_15999857.1| ribosomal protein L18 [Neisseria meningitidis 98008]
gi|421556145|ref|ZP_16002062.1| ribosomal protein L18 [Neisseria meningitidis 80179]
gi|421558188|ref|ZP_16004072.1| ribosomal protein L18 [Neisseria meningitidis 92045]
gi|421560310|ref|ZP_16006169.1| ribosomal protein L18 [Neisseria meningitidis NM2657]
gi|421564338|ref|ZP_16010137.1| ribosomal protein L18 [Neisseria meningitidis NM3081]
gi|421566629|ref|ZP_16012372.1| ribosomal protein L18 [Neisseria meningitidis NM3001]
gi|421907637|ref|ZP_16337512.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha704]
gi|433464151|ref|ZP_20421645.1| ribosomal protein L18 [Neisseria meningitidis NM422]
gi|433466272|ref|ZP_20423735.1| ribosomal protein L18 [Neisseria meningitidis 87255]
gi|433468393|ref|ZP_20425830.1| ribosomal protein L18 [Neisseria meningitidis 98080]
gi|433470523|ref|ZP_20427923.1| ribosomal protein L18 [Neisseria meningitidis 68094]
gi|433472539|ref|ZP_20429909.1| ribosomal protein L18 [Neisseria meningitidis 97021]
gi|433474632|ref|ZP_20431980.1| ribosomal protein L18 [Neisseria meningitidis 88050]
gi|433476736|ref|ZP_20434064.1| ribosomal protein L18 [Neisseria meningitidis 70012]
gi|433478886|ref|ZP_20436185.1| ribosomal protein L18 [Neisseria meningitidis 63041]
gi|433480964|ref|ZP_20438236.1| ribosomal protein L18 [Neisseria meningitidis 2006087]
gi|433483087|ref|ZP_20440325.1| ribosomal protein L18 [Neisseria meningitidis 2002038]
gi|433485187|ref|ZP_20442393.1| ribosomal protein L18 [Neisseria meningitidis 97014]
gi|433487355|ref|ZP_20444534.1| ribosomal protein L18 [Neisseria meningitidis M13255]
gi|433489530|ref|ZP_20446669.1| ribosomal protein L18 [Neisseria meningitidis NM418]
gi|433493750|ref|ZP_20450826.1| ribosomal protein L18 [Neisseria meningitidis NM762]
gi|433495866|ref|ZP_20452915.1| ribosomal protein L18 [Neisseria meningitidis M7089]
gi|433497866|ref|ZP_20454883.1| ribosomal protein L18 [Neisseria meningitidis M7124]
gi|433499940|ref|ZP_20456932.1| ribosomal protein L18 [Neisseria meningitidis NM174]
gi|433504178|ref|ZP_20461123.1| ribosomal protein L18 [Neisseria meningitidis 9506]
gi|433506210|ref|ZP_20463129.1| ribosomal protein L18 [Neisseria meningitidis 9757]
gi|433508427|ref|ZP_20465313.1| ribosomal protein L18 [Neisseria meningitidis 12888]
gi|433510428|ref|ZP_20467271.1| ribosomal protein L18 [Neisseria meningitidis 4119]
gi|433512516|ref|ZP_20469318.1| ribosomal protein L18 [Neisseria meningitidis 63049]
gi|433514713|ref|ZP_20471489.1| ribosomal protein L18 [Neisseria meningitidis 2004090]
gi|433516743|ref|ZP_20473497.1| ribosomal protein L18 [Neisseria meningitidis 96023]
gi|433518936|ref|ZP_20475663.1| ribosomal protein L18 [Neisseria meningitidis 65014]
gi|433520946|ref|ZP_20477648.1| ribosomal protein L18 [Neisseria meningitidis 61103]
gi|433523052|ref|ZP_20479725.1| ribosomal protein L18 [Neisseria meningitidis 97020]
gi|433525117|ref|ZP_20481763.1| ribosomal protein L18 [Neisseria meningitidis 69096]
gi|433527320|ref|ZP_20483933.1| ribosomal protein L18 [Neisseria meningitidis NM3652]
gi|433529411|ref|ZP_20486011.1| ribosomal protein L18 [Neisseria meningitidis NM3642]
gi|433531533|ref|ZP_20488102.1| ribosomal protein L18 [Neisseria meningitidis 2007056]
gi|433533673|ref|ZP_20490222.1| ribosomal protein L18 [Neisseria meningitidis 2001212]
gi|433535759|ref|ZP_20492279.1| ribosomal protein L18 [Neisseria meningitidis 77221]
gi|433537919|ref|ZP_20494406.1| ribosomal protein L18 [Neisseria meningitidis 70030]
gi|433540091|ref|ZP_20496548.1| ribosomal protein L18 [Neisseria meningitidis 63006]
gi|73621628|sp|Q5F5U3.1|RL18_NEIG1 RecName: Full=50S ribosomal protein L18
gi|73621629|sp|Q9JQQ6.1|RL18_NEIMA RecName: Full=50S ribosomal protein L18
gi|73621630|sp|Q7DDT0.1|RL18_NEIMB RecName: Full=50S ribosomal protein L18
gi|166218576|sp|A1KRI9.1|RL18_NEIMF RecName: Full=50S ribosomal protein L18
gi|189041561|sp|A9M3V0.1|RL18_NEIM0 RecName: Full=50S ribosomal protein L18
gi|7225376|gb|AAF40616.1| 50S ribosomal protein L18 [Neisseria meningitidis MC58]
gi|59719039|gb|AAW90444.1| putative 50S ribosomal protein L18 [Neisseria gonorrhoeae FA 1090]
gi|120865738|emb|CAM09467.1| 50S ribosomal protein L18 [Neisseria meningitidis FAM18]
gi|121051160|emb|CAM07431.1| 50S ribosomal protein L18 [Neisseria meningitidis Z2491]
gi|161596454|gb|ABX74114.1| 50S ribosomal protein L18 [Neisseria meningitidis 053442]
gi|226513745|gb|EEH63090.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae 1291]
gi|254669340|emb|CBA08399.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha14]
gi|254670756|emb|CBA07017.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha153]
gi|261391694|emb|CAX49143.1| 50S ribosomal protein L18 [Neisseria meningitidis 8013]
gi|268547181|gb|EEZ42599.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae 35/02]
gi|268551557|gb|EEZ46576.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae FA19]
gi|268584145|gb|EEZ48821.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae MS11]
gi|268586483|gb|EEZ51159.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID18]
gi|268588746|gb|EEZ53422.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID1]
gi|268623357|gb|EEZ55757.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae PID332]
gi|268623545|gb|EEZ55945.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae SK-92-679]
gi|268627787|gb|EEZ60187.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae SK-93-1035]
gi|291013227|gb|EFE05193.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae DGI2]
gi|291611449|gb|EFF40519.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae F62]
gi|296840092|gb|EFH24030.1| ribosomal protein L18 [Neisseria polysaccharea ATCC 43768]
gi|304337093|gb|EFM03280.1| 50S ribosomal protein L18 [Neisseria meningitidis ATCC 13091]
gi|308388374|gb|ADO30694.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha710]
gi|319411358|emb|CBY91769.1| 50S ribosomal protein L18 [Neisseria meningitidis WUE 2594]
gi|325129077|gb|EGC51926.1| ribosomal protein L18 [Neisseria meningitidis N1568]
gi|325135164|gb|EGC57790.1| ribosomal protein L18 [Neisseria meningitidis M13399]
gi|325137216|gb|EGC59811.1| ribosomal protein L18 [Neisseria meningitidis M0579]
gi|325141172|gb|EGC63672.1| ribosomal protein L18 [Neisseria meningitidis CU385]
gi|325143248|gb|EGC65587.1| ribosomal protein L18 [Neisseria meningitidis 961-5945]
gi|325145355|gb|EGC67632.1| ribosomal protein L18 [Neisseria meningitidis M01-240013]
gi|325197445|gb|ADY92901.1| ribosomal protein L18 [Neisseria meningitidis G2136]
gi|325199371|gb|ADY94826.1| ribosomal protein L18 [Neisseria meningitidis H44/76]
gi|325203007|gb|ADY98461.1| ribosomal protein L18 [Neisseria meningitidis M01-240149]
gi|325203278|gb|ADY98731.1| ribosomal protein L18 [Neisseria meningitidis M01-240355]
gi|325205251|gb|ADZ00704.1| ribosomal protein L18 [Neisseria meningitidis M04-240196]
gi|325207195|gb|ADZ02647.1| ribosomal protein L18 [Neisseria meningitidis NZ-05/33]
gi|372203208|gb|EHP16916.1| ribosomal protein L18 [Neisseria meningitidis NM220]
gi|372203851|gb|EHP17452.1| ribosomal protein L18 [Neisseria meningitidis NM233]
gi|389604775|emb|CCA43701.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha522]
gi|393291306|emb|CCI73509.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha704]
gi|402319674|gb|EJU55179.1| ribosomal protein L18 [Neisseria meningitidis 93003]
gi|402319870|gb|EJU55374.1| ribosomal protein L18 [Neisseria meningitidis NM255]
gi|402321933|gb|EJU57404.1| ribosomal protein L18 [Neisseria meningitidis 93004]
gi|402325847|gb|EJU61254.1| ribosomal protein L18 [Neisseria meningitidis NM183]
gi|402326402|gb|EJU61804.1| ribosomal protein L18 [Neisseria meningitidis NM140]
gi|402327709|gb|EJU63096.1| ribosomal protein L18 [Neisseria meningitidis NM2781]
gi|402331669|gb|EJU67001.1| ribosomal protein L18 [Neisseria meningitidis 69166]
gi|402332815|gb|EJU68133.1| ribosomal protein L18 [Neisseria meningitidis NM576]
gi|402333942|gb|EJU69237.1| ribosomal protein L18 [Neisseria meningitidis 98008]
gi|402337998|gb|EJU73237.1| ribosomal protein L18 [Neisseria meningitidis 80179]
gi|402338582|gb|EJU73813.1| ribosomal protein L18 [Neisseria meningitidis 92045]
gi|402340483|gb|EJU75683.1| ribosomal protein L18 [Neisseria meningitidis NM2657]
gi|402345053|gb|EJU80180.1| ribosomal protein L18 [Neisseria meningitidis NM3001]
gi|402345935|gb|EJU81039.1| ribosomal protein L18 [Neisseria meningitidis NM3081]
gi|432205060|gb|ELK61091.1| ribosomal protein L18 [Neisseria meningitidis 87255]
gi|432205961|gb|ELK61976.1| ribosomal protein L18 [Neisseria meningitidis NM422]
gi|432206479|gb|ELK62486.1| ribosomal protein L18 [Neisseria meningitidis 98080]
gi|432211956|gb|ELK67900.1| ribosomal protein L18 [Neisseria meningitidis 68094]
gi|432212423|gb|ELK68361.1| ribosomal protein L18 [Neisseria meningitidis 97021]
gi|432212692|gb|ELK68627.1| ribosomal protein L18 [Neisseria meningitidis 88050]
gi|432217889|gb|ELK73754.1| ribosomal protein L18 [Neisseria meningitidis 70012]
gi|432218860|gb|ELK74712.1| ribosomal protein L18 [Neisseria meningitidis 63041]
gi|432219317|gb|ELK75164.1| ribosomal protein L18 [Neisseria meningitidis 2006087]
gi|432223533|gb|ELK79313.1| ribosomal protein L18 [Neisseria meningitidis 2002038]
gi|432224647|gb|ELK80410.1| ribosomal protein L18 [Neisseria meningitidis 97014]
gi|432226120|gb|ELK81853.1| ribosomal protein L18 [Neisseria meningitidis M13255]
gi|432230526|gb|ELK86201.1| ribosomal protein L18 [Neisseria meningitidis NM418]
gi|432231928|gb|ELK87583.1| ribosomal protein L18 [Neisseria meningitidis NM762]
gi|432237049|gb|ELK92649.1| ribosomal protein L18 [Neisseria meningitidis M7124]
gi|432237508|gb|ELK93101.1| ribosomal protein L18 [Neisseria meningitidis M7089]
gi|432237850|gb|ELK93439.1| ribosomal protein L18 [Neisseria meningitidis NM174]
gi|432243561|gb|ELK99072.1| ribosomal protein L18 [Neisseria meningitidis 9506]
gi|432244226|gb|ELK99721.1| ribosomal protein L18 [Neisseria meningitidis 9757]
gi|432250078|gb|ELL05476.1| ribosomal protein L18 [Neisseria meningitidis 12888]
gi|432250271|gb|ELL05666.1| ribosomal protein L18 [Neisseria meningitidis 63049]
gi|432250496|gb|ELL05889.1| ribosomal protein L18 [Neisseria meningitidis 4119]
gi|432256377|gb|ELL11700.1| ribosomal protein L18 [Neisseria meningitidis 2004090]
gi|432256535|gb|ELL11857.1| ribosomal protein L18 [Neisseria meningitidis 96023]
gi|432256901|gb|ELL12212.1| ribosomal protein L18 [Neisseria meningitidis 65014]
gi|432262730|gb|ELL17965.1| ribosomal protein L18 [Neisseria meningitidis 61103]
gi|432262925|gb|ELL18156.1| ribosomal protein L18 [Neisseria meningitidis 97020]
gi|432263265|gb|ELL18485.1| ribosomal protein L18 [Neisseria meningitidis 69096]
gi|432267389|gb|ELL22567.1| ribosomal protein L18 [Neisseria meningitidis NM3652]
gi|432269553|gb|ELL24710.1| ribosomal protein L18 [Neisseria meningitidis 2007056]
gi|432270062|gb|ELL25209.1| ribosomal protein L18 [Neisseria meningitidis NM3642]
gi|432274226|gb|ELL29319.1| ribosomal protein L18 [Neisseria meningitidis 2001212]
gi|432276059|gb|ELL31121.1| ribosomal protein L18 [Neisseria meningitidis 70030]
gi|432276770|gb|ELL31825.1| ribosomal protein L18 [Neisseria meningitidis 77221]
gi|432278072|gb|ELL33116.1| ribosomal protein L18 [Neisseria meningitidis 63006]
Length = 117
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+S S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ A V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAAGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|403284986|ref|XP_003933825.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 180
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC ++GR+LA+R EA
Sbjct: 81 LRVIRTQHHVDAFVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|349574888|ref|ZP_08886820.1| 50S ribosomal protein L18 [Neisseria shayeganii 871]
gi|348013575|gb|EGY52487.1| 50S ribosomal protein L18 [Neisseria shayeganii 871]
Length = 117
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF + + A + + + +A A T ++++V++S S + A IG+
Sbjct: 18 IAALKMVRLCVFRTNNHIYAQVINAEGDRVLASASTLEAEVRSVIKSGSTVEAAAIIGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+AE+A+ A + ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKNAGIERVAF-DRSGFQYHGRVKALAEAARENGLS 116
>gi|240850819|ref|YP_002972219.1| 50S ribosomal protein L18 [Bartonella grahamii as4aup]
gi|240267942|gb|ACS51530.1| 50S ribosomal protein L18 [Bartonella grahamii as4aup]
Length = 120
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S +D A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQVIDDLRGCTLVSASTLESDLKKSLKSGADKKAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGLN 119
>gi|389577516|ref|ZP_10167544.1| ribosomal protein L18, bacterial type [Eubacterium cellulosolvens
6]
gi|389313001|gb|EIM57934.1| ribosomal protein L18, bacterial type [Eubacterium cellulosolvens
6]
Length = 122
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
KH + E L VF S + A + T+K + A T KD+KA L +D+
Sbjct: 14 KHRRMRNHIAGTSERPRLSVFRSNNHMYAQIIDDSTAKTLVAASTLEKDVKANLEKTNDV 73
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A +G ++ ++A EA + + R + GK++A+ + + G++
Sbjct: 74 EAAKYLGSVIGKKAVEAGIKAVVF-DRGGYIYHGKVQALADAAREAGLE 121
>gi|301779940|ref|XP_002925384.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 180
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H + V A T IK L ++ AC +IGR+LAER EA
Sbjct: 81 LRVIRTQHHVEALVEHH-NGQVVVSASTREWAIKKHLYCTKNVVACESIGRVLAERCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQSAMTEGGV 170
>gi|86357321|ref|YP_469213.1| 50S ribosomal protein L18 [Rhizobium etli CFN 42]
gi|115504938|sp|Q2K9K0.1|RL18_RHIEC RecName: Full=50S ribosomal protein L18
gi|86281423|gb|ABC90486.1| 50S ribosomal protein L18 [Rhizobium etli CFN 42]
Length = 120
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 67 KKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAV 126
+++ +HI ++VA P L V S + + A + V K +A A T KD++
Sbjct: 10 RRANRVRRHI----KSVANGRP-RLSVHRSSKNIYAQIIDDVAGKTLASASTLDKDLRGS 64
Query: 127 LRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
L++ +D A A+G+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 65 LKTGADTAAAAAVGKLVAERASKAGVTDVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|298291454|ref|YP_003693393.1| 50S ribosomal protein L18 [Starkeya novella DSM 506]
gi|296927965|gb|ADH88774.1| ribosomal protein L18 [Starkeya novella DSM 506]
Length = 120
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R+ A P L V S + + A + +A A + KD++ L++ +DI A AIG
Sbjct: 20 RSTANGRP-RLSVHRSSKHIYAQIIDDARGVTIAAASSLEKDLRGSLKTGADIAAAQAIG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
+++AERA A V + +R F G+++A+ ++ + G++
Sbjct: 79 KLVAERAVAAGVKDVVF---DRGAFIYHGRVKALAEAAREGGLN 119
>gi|351703956|gb|EHB06875.1| 39S ribosomal protein L18, mitochondrial [Heterocephalus glaber]
Length = 179
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H + V A T IK L S ++ AC ++GR+LA+R EA
Sbjct: 80 LRVIRTQHHVEALVEH-WNGRVVVSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 139 GINFMVYQPTPWEAASDSMKCLQSAMTEGGV 169
>gi|110634014|ref|YP_674222.1| 50S ribosomal protein L18 [Chelativorans sp. BNC1]
gi|115504908|sp|Q11HR8.1|RL18_MESSB RecName: Full=50S ribosomal protein L18
gi|110284998|gb|ABG63057.1| LSU ribosomal protein L18P [Chelativorans sp. BNC1]
Length = 119
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K + VA P L V+ S + + A + V +A A + KD++ L++ +D+ A
Sbjct: 17 KLKAVATERP-RLSVYRSSKHIYAQVIDDVKGHTLAAASSLDKDLREKLKTGADVDAAGV 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+G+++AERA++A + + R + G+++A+ + + G++
Sbjct: 76 VGKLIAERAKKAGIDKVVF-DRGPYIYHGRVKALADAAREGGLE 118
>gi|254672686|emb|CBA06570.1| 50S ribosomal protein L18 [Neisseria meningitidis alpha275]
Length = 95
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + A + K +A A T +++ L+S S++ A +G+ +AE+A+ A
Sbjct: 4 LCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAA 63
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V ++ R ++ G+++A+ ++ +NG+
Sbjct: 64 GVEKVAF-DRSGFQYHGRVKALAEAARENGLS 94
>gi|344923974|ref|ZP_08777435.1| 50S ribosomal protein L18 [Candidatus Odyssella thessalonicensis
L13]
Length = 119
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 76 ISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 135
I K R V+ +P L V S +++ A + + S +A A + K+ L++ S++ A
Sbjct: 14 IRSKLRKVSSGKP-RLTVHRSSKYLYAQVIDDIKSITIAAASSLEAATKSDLKNTSNLEA 72
Query: 136 CLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IG+++AERA +A V + R +F G+I+A+ + ++G+
Sbjct: 73 AKLIGKLIAERANKAGVKEVVF-DRSGYRFHGRIKAIADAARESGL 117
>gi|302036681|ref|YP_003797003.1| 50S ribosomal protein L18 [Candidatus Nitrospira defluvii]
gi|300604745|emb|CBK41077.1| 50S ribosomal protein L18 [Candidatus Nitrospira defluvii]
Length = 121
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 65 KEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
+EK K + ++ + E L+VF S+ + A + + VA A T + ++
Sbjct: 4 QEKNRKLARRKQRVRKSVIGTSERPRLNVFRSRAHIYAQIIDDLRGHTVASASTLDESLR 63
Query: 125 AVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
++S I A+G+++AERA+ A V + R ++ G+++A+ + + G+
Sbjct: 64 KTVKSTGSIEGAKAVGKLIAERAKAAKVSMVVF-DRGGRQYHGRVKALADASREGGL 119
>gi|440902236|gb|ELR53049.1| 39S ribosomal protein L18, mitochondrial [Bos grunniens mutus]
Length = 180
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S+ + A + HR + V A T IK L S + AC ++GR+LA R EA
Sbjct: 81 LRVIRSQHHIEALVEHR-NGQVVVSASTREWAIKKHLYSTKSVVACESVGRVLALRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + +I+ G+
Sbjct: 140 GINFMVYQPTPWEAASDSMKRLQIGMIEGGV 170
>gi|253995734|ref|YP_003047798.1| 50S ribosomal protein L18 [Methylotenera mobilis JLW8]
gi|253982413|gb|ACT47271.1| ribosomal protein L18 [Methylotenera mobilis JLW8]
Length = 117
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L V + + A + K + A T +++ +++ ++ A AIG++
Sbjct: 18 IAELKVTRLSVHRTNTHIYAQIIAGTGDKVIVSASTVEAEVRKNIKNGGNVEAATAIGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A +A V T ++ R K+ G+I+A+ + +NG+
Sbjct: 78 IAEKAIKAGVTTVAF-DRSGYKYHGRIKALADAARENGL 115
>gi|170077670|ref|YP_001734308.1| 50S ribosomal protein L18 [Synechococcus sp. PCC 7002]
gi|226723387|sp|B1XJJ2.1|RL18_SYNP2 RecName: Full=50S ribosomal protein L18
gi|169885339|gb|ACA99052.1| ribosomal protein L18 [Synechococcus sp. PCC 7002]
Length = 120
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + A T KD+K L S +I A A+G ++A+RA E
Sbjct: 29 LAVFRSHKHIYAQVIDDEKQHTLVAASTLDKDLKGELASGGNISASTAVGNLIAKRALEK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + R + + G+++A+ + + G+D
Sbjct: 89 GITKVVF-DRGGNLYHGRVKALADAAREAGLD 119
>gi|357032610|ref|ZP_09094545.1| 50S ribosomal protein L18 [Gluconobacter morbifer G707]
gi|356413601|gb|EHH67253.1| 50S ribosomal protein L18 [Gluconobacter morbifer G707]
Length = 120
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A T K ++ ++ +D+ A AIG+++AER A
Sbjct: 29 LSVFRSSKHIHAQIIDDAQGRTLASASTLEKTVRENGKTGADVAAASAIGKLIAERGVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V T + R + G+++A+ ++ + G+
Sbjct: 89 GVKTVVF-DRGAYLYHGRVKALAEAAREGGL 118
>gi|162149158|ref|YP_001603619.1| 50S ribosomal protein L18 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545098|ref|YP_002277327.1| 50S ribosomal protein L18 [Gluconacetobacter diazotrophicus PAl 5]
gi|189041555|sp|A9H3L5.1|RL18_GLUDA RecName: Full=50S ribosomal protein L18
gi|161787735|emb|CAP57331.1| putative 50S ribosomal protein L18 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532775|gb|ACI52712.1| ribosomal protein L18 [Gluconacetobacter diazotrophicus PAl 5]
Length = 120
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + V + +A A + K ++ L++ +D A +A+G+++AERA A
Sbjct: 29 LSVFRSGKNIYAQVIDDVAGRTLAAASSLDKALREQLKTGADSDAAVAVGKLVAERAVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+I+A+ ++ + G+
Sbjct: 89 GVSLVVF-DRGSYMYHGRIKALAEAAREGGL 118
>gi|336421079|ref|ZP_08601239.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 5_1_57FAA]
gi|336002438|gb|EGN32547.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 5_1_57FAA]
Length = 122
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRVKKHRRIRNRLSGTPECPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G+++AE+A E + + +R F +GKI+A+ + + G+
Sbjct: 64 KAELEKTNNVDAAAYLGKVIAEKAIEKGIKDVVF---DRGGFIYQGKIQALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|395777967|ref|ZP_10458480.1| 50S ribosomal protein L18 [Bartonella elizabethae Re6043vi]
gi|423715893|ref|ZP_17690114.1| 50S ribosomal protein L18 [Bartonella elizabethae F9251]
gi|395418276|gb|EJF84603.1| 50S ribosomal protein L18 [Bartonella elizabethae Re6043vi]
gi|395429195|gb|EJF95269.1| 50S ribosomal protein L18 [Bartonella elizabethae F9251]
Length = 120
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S +D A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQVIDDLRGCTLVSASTLESDLKKSLKSGADKEAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGLN 119
>gi|49474388|ref|YP_032430.1| 50S ribosomal protein L18 [Bartonella quintana str. Toulouse]
gi|403530676|ref|YP_006665205.1| 50S ribosomal protein L18 [Bartonella quintana RM-11]
gi|73621561|sp|Q6FZD8.1|RL18_BARQU RecName: Full=50S ribosomal protein L18
gi|49239892|emb|CAF26290.1| 50s ribosomal protein l18 [Bartonella quintana str. Toulouse]
gi|403232747|gb|AFR26490.1| 50S ribosomal protein L18 [Bartonella quintana RM-11]
Length = 120
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + A T D+K L+S SD A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDSRGCTLVSASTLEGDLKKSLKSGSDKQAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGLN 119
>gi|260577163|ref|ZP_05845140.1| ribosomal protein L18 [Rhodobacter sp. SW2]
gi|259020637|gb|EEW23956.1| ribosomal protein L18 [Rhodobacter sp. SW2]
Length = 119
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 56 DNSRPYTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAV 115
+N R K+ ++ +N K ++ + L V S + +S L V +A
Sbjct: 3 NNKRELFLKRRQRVRNKIKAMANGRAR--------LSVHRSNKNISVQLIDDVNGVTLAA 54
Query: 116 AGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQS 175
A T KD+ + ++++ A +G ++AERA+ A + A Y R F GKI+A+ ++
Sbjct: 55 ASTLEKDLGFL--GKNNVEAATKVGAVIAERAKAAGI-DACYFDRGGFLFHGKIKALAEA 111
Query: 176 LIDNGI 181
+ G+
Sbjct: 112 AREGGL 117
>gi|307946302|ref|ZP_07661637.1| ribosomal protein L18 [Roseibium sp. TrichSKD4]
gi|307769966|gb|EFO29192.1| ribosomal protein L18 [Roseibium sp. TrichSKD4]
Length = 120
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + A T KD+K L++ +D A A+G+++AERA A
Sbjct: 29 LSVFRSSKQIYAQIIDDAKGHTLVSASTIEKDVKGNLKTGADTAAAAAVGKLVAERASAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + R ++ G+++A+ + + G+D
Sbjct: 89 GIKQVVF-DRGGYQYHGRVKALADAAREGGLD 119
>gi|319404409|emb|CBI78012.1| 50S ribosomal protein L18 [Bartonella rochalimae ATCC BAA-1498]
Length = 120
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + A T K++K L+S SD A +G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDTRGHTLVSACTLEKNLKNSLKSGSDKEAAFVVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+I+A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGPYVYHGRIKALAEAAREGGLN 119
>gi|194883540|ref|XP_001975859.1| GG20334 [Drosophila erecta]
gi|190659046|gb|EDV56259.1| GG20334 [Drosophila erecta]
Length = 186
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAR 148
TL++ + R+VSA + H + + A T+ IK L +D A + +GR+LA R
Sbjct: 61 HTLEINSTGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAHRCL 119
Query: 149 EADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
++ + T K++ ++Q+L DNG+ K
Sbjct: 120 QSGI--TEMTCNVEAVPGSKLQKLLQTLQDNGVSFK 153
>gi|431904572|gb|ELK09954.1| 39S ribosomal protein L18, mitochondrial [Pteropus alecto]
Length = 180
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ + A + HR + V A T IK L S ++ AC +IGR+LA R EA
Sbjct: 81 LRVVRTQHHIEAVVEHR-NGQVVVSASTREWAIKKYLYSTRNVVACESIGRVLAGRCLEA 139
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 140 GINFMVYQPTPWEAASDSMQRLRNAMTEGGV 170
>gi|210611141|ref|ZP_03288755.1| hypothetical protein CLONEX_00945 [Clostridium nexile DSM 1787]
gi|210152128|gb|EEA83135.1| hypothetical protein CLONEX_00945 [Clostridium nexile DSM 1787]
Length = 122
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRVNKHRKLRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGTTLVSASTVQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G ++A++A E + T + +R F +GKI+A+ + + G+
Sbjct: 64 KAELEKTNNVDAAAYLGTVIAKKAIEKGINTVVF---DRGGFIYQGKIKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 E 121
>gi|319407410|emb|CBI81061.1| 50S ribosomal protein L18 [Bartonella sp. 1-1C]
Length = 120
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + A T K++K L+S SD A +G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDTRGHTLVSACTLEKNLKNSLKSGSDKEAAFVVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+I+A+ ++ + G++
Sbjct: 89 GVNEVVF-DRGPYVYHGRIKALAEAAREGGLN 119
>gi|346722895|ref|YP_001181040.2| 50S ribosomal protein L18 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|380865412|sp|A4XLR4.2|RL18_CALS8 RecName: Full=50S ribosomal protein L18
gi|345106866|gb|ABP67849.2| ribosomal protein L18 [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 124
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 63 YKK-EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 121
YKK + K +H +++ E L V+ S +++ A + + A +
Sbjct: 4 YKKVNRNEKRLIRHKRIRKKVFGTAERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSLEP 63
Query: 122 DIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IK+ L S I A IGR++AERA+E + T R + G+++A+ + + G+
Sbjct: 64 EIKSRLTSTKSIEAAQYIGRVIAERAKEKGI-TKVVFDRGGYPYHGRVKALADAAREAGL 122
Query: 182 D 182
+
Sbjct: 123 E 123
>gi|121601954|ref|YP_989013.1| 50S ribosomal protein L18 [Bartonella bacilliformis KC583]
gi|421760816|ref|ZP_16197630.1| 50S ribosomal protein L18 [Bartonella bacilliformis INS]
gi|166218503|sp|A1USR0.1|RL18_BARBK RecName: Full=50S ribosomal protein L18
gi|120614131|gb|ABM44732.1| ribosomal protein L18 [Bartonella bacilliformis KC583]
gi|411174584|gb|EKS44616.1| 50S ribosomal protein L18 [Bartonella bacilliformis INS]
Length = 120
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + V +A A T + +K LRS SD A A+G+++AERA+++
Sbjct: 29 LSVYRSNQNIYAQIIDDVRGCTLASACTLEEGMKKSLRSGSDKKAAFAVGKLIAERAKKS 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ ++ + G+
Sbjct: 89 GINEVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|144900900|emb|CAM77764.1| 50S ribosomal protein L18 [Magnetospirillum gryphiswaldense MSR-1]
Length = 120
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + V K +A A T K++K L++ +D A A+G+++AERA+ A
Sbjct: 29 LSVFRSGKNIYVQVIDDVQGKTLAAASTLDKELKGSLKTGADTAAAAAVGKLIAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ ++ + G+
Sbjct: 89 GITEVVF-DRGGYIYHGRVKALAEAAREGGL 118
>gi|347533181|ref|YP_004839944.1| 50S ribosomal protein L18 [Roseburia hominis A2-183]
gi|345503329|gb|AEN98012.1| 50S ribosomal protein L18 [Roseburia hominis A2-183]
Length = 122
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + + KH + V E L VF S + A + + A T KD+
Sbjct: 4 KKSRTAVRENKHRRMRHHLVGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLEKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G ++A++A + + T + +R F +GK++A+ + + G+
Sbjct: 64 KAELEKTNNVEAAAKLGTVIAKKALDKGINTVVF---DRGGFIYQGKVKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 E 121
>gi|344344820|ref|ZP_08775679.1| ribosomal protein L18 [Marichromatium purpuratum 984]
gi|343803514|gb|EGV21421.1| ribosomal protein L18 [Marichromatium purpuratum 984]
Length = 118
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 89 FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK-AVLRSRSDIPACLAIGRILAERA 147
F L V + R + A + K VA A T KD++ A+ + ++ A IG+ +AERA
Sbjct: 24 FRLCVHRTPRHIYAQVIAPEGDKVVASASTLDKDLRQAIEGHKGNVAAAAVIGQAIAERA 83
Query: 148 READVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
R A V + ++ R ++ G+++A+ + ++G+
Sbjct: 84 RSAGVESVAFD-RSGFRYHGRVKALADAAREHGL 116
>gi|430003436|emb|CCF19223.1| 50S ribosomal subunit protein L18 [Rhizobium sp.]
Length = 120
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
+KE +K ++ + + + VA P L V S + + + V + +A A T D+
Sbjct: 4 RKEALAKRASR-VRRQIKAVANGRP-RLSVHRSSKNIYVQVIDDVAGRTLAAASTLDADL 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
++ L++ +D+ A A+G+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 62 RSKLKTGADVEAAAAVGKLVAERATKAGVKEVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|357418214|ref|YP_004931234.1| 50S ribosomal protein L18 [Pseudoxanthomonas spadix BD-a59]
gi|355335792|gb|AER57193.1| 50S ribosomal protein L18 [Pseudoxanthomonas spadix BD-a59]
Length = 118
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK VA A T D+K L++ + A IG+++AERAR A V ++ R ++ G++
Sbjct: 46 SKVVASANTLQADVKEGLKNGKNSDAAAKIGKLIAERARAAGVEKVAF-DRSGYRYHGRV 104
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 105 KALADAAREGGL 116
>gi|99080111|ref|YP_612265.1| 50S ribosomal protein L18 [Ruegeria sp. TM1040]
gi|259415866|ref|ZP_05739786.1| ribosomal protein L18 [Silicibacter sp. TrichCH4B]
gi|115504955|sp|Q1GK13.1|RL18_SILST RecName: Full=50S ribosomal protein L18
gi|99036391|gb|ABF63003.1| LSU ribosomal protein L18P [Ruegeria sp. TM1040]
gi|259347305|gb|EEW59082.1| ribosomal protein L18 [Silicibacter sp. TrichCH4B]
Length = 119
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +S L V +A A T KD+ V +++I A +G ++AERA+ A
Sbjct: 30 LSVHRSNKNISVQLIDDVKGVTLAAASTLEKDLGFV--GKNNIEAATKVGSVIAERAKAA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V T +Y R + GK++A+ + + G+ +
Sbjct: 88 GV-TEAYFDRGGFLYHGKVKALADAAREGGLKI 119
>gi|374623973|ref|ZP_09696464.1| 50S ribosomal protein L18 [Ectothiorhodospira sp. PHS-1]
gi|373943065|gb|EHQ53610.1| 50S ribosomal protein L18 [Ectothiorhodospira sp. PHS-1]
Length = 117
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R V A + S+ + A T D++ L+S +I A A+GR++AERA
Sbjct: 26 LCVHRTPRHVYAQIIAPSGSEVLTCASTVEADVRGGLKSTGNIEAAAAVGRLIAERAVAK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ ++ R K+ G+++A+ + + G++
Sbjct: 86 GIKKVAF-DRSGFKYHGRVKALADAAREGGLE 116
>gi|444722572|gb|ELW63260.1| 39S ribosomal protein L18, mitochondrial [Tupaia chinensis]
Length = 213
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 76 ISFKQRTVAYMEP-----FTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSR 130
++ K+R A + P L V ++ + A + H + V A T IK L S
Sbjct: 60 VARKERGWATVWPSREFWHRLRVTRTQHHIEAFVEH-CNGQVVVSASTREWAIKKHLYST 118
Query: 131 SDIPACLAIGRILAERAREADVYTASYTP 159
++ AC ++GR+LAER EA ++ Y P
Sbjct: 119 RNVVACESVGRVLAERCLEAGIHFMVYQP 147
>gi|319405882|emb|CBI79514.1| 50S ribosomal protein L18 [Bartonella sp. AR 15-3]
Length = 120
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + + A T K++K L+S +D A +G+++AERA+E
Sbjct: 29 LSVYRSNQNIYAQIIDDKSGRTLVSACTLEKNLKNSLKSGADKEAAFVVGKLIAERAKEV 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+I+A+ ++ + G++
Sbjct: 89 GVKEVVF-DRGPYVYHGRIKALAEAAREGGLN 119
>gi|402868648|ref|XP_003898407.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Papio anubis]
Length = 179
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC IGR+LA+R EA
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACENIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMREGGVVLR 172
>gi|402863298|ref|XP_003895963.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like isoform 1
[Papio anubis]
gi|402863300|ref|XP_003895964.1| PREDICTED: 39S ribosomal protein L18, mitochondrial-like isoform 2
[Papio anubis]
Length = 179
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + H+ K V A T IK L S ++ AC IGR+LA+R EA
Sbjct: 80 LRVIRTQHHVEALVEHQ-NGKVVVSASTREWAIKKHLYSTRNVVACENIGRVLAQRCLEA 138
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 139 GINFMVYQPTPWEAASDSMKRLQSAMREGGVVLR 172
>gi|295698633|ref|YP_003603288.1| 50S ribosomal protein L18 [Candidatus Riesia pediculicola USDA]
gi|291157349|gb|ADD79794.1| ribosomal protein L18 [Candidatus Riesia pediculicola USDA]
Length = 118
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 78 FKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACL 137
K+R VA L + + R + A +T SK +A A T KD+K L + +
Sbjct: 19 MKKRDVA-----CLTIHRTSRHIYAQITSIGGSKTLACASTTEKDVKKNLIRTGNKKSAG 73
Query: 138 AIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
IG+I+AER + + + R K+ G+I + +S D+G+
Sbjct: 74 IIGKIIAERCLKIGIKKVCF-DRSGFKYHGRILTLAESARDHGLQ 117
>gi|389694586|ref|ZP_10182680.1| ribosomal protein L18, bacterial type [Microvirga sp. WSM3557]
gi|388587972|gb|EIM28265.1| ribosomal protein L18, bacterial type [Microvirga sp. WSM3557]
Length = 120
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + V VA A T D+K L++ + + A +G+++AERA +A
Sbjct: 29 LSVFRSSKQIYAQVIDDVRGHTVASASTLEADLKGKLKTGATVDAAKEVGKLVAERAVQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V + R + G+++A+ + + G+D
Sbjct: 89 GVKQVIF-DRSGYLYHGRVKALADAAREGGLD 119
>gi|390952396|ref|YP_006416155.1| 50S ribosomal protein L18 [Thiocystis violascens DSM 198]
gi|390428965|gb|AFL76030.1| LSU ribosomal protein L18P [Thiocystis violascens DSM 198]
Length = 118
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK-AVLRSRSDIPACLAIGRILA 144
M F L V+ + R A + K VA A T KDI+ ++ ++++I A IG+ +A
Sbjct: 21 MGEFRLCVYRTPRHTYAQIIAPTGDKVVASASTLDKDIRQSIEGNKANIVAATVIGKAIA 80
Query: 145 ERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
ERA A V ++ R ++ G+++A+ + ++G+
Sbjct: 81 ERALSAGVERVAF-DRSGFRYHGRLKALADAAREHGL 116
>gi|451980699|ref|ZP_21929085.1| 50S ribosomal protein L18 [Nitrospina gracilis 3/211]
gi|451762035|emb|CCQ90324.1| 50S ribosomal protein L18 [Nitrospina gracilis 3/211]
Length = 122
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K RT + L VF S + A + K +A A + +KD +A +++ ++ A
Sbjct: 19 KNRTQKDPQKLRLSVFRSTNHIYAQIIDDANRKTLASASSLTKDFQAKMKTGGNVEAAKL 78
Query: 139 IGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+G +L E+A + Y +R+ F G+++A+ +++ + GI
Sbjct: 79 VGSMLGEKASAQGIKEVYY---DRNGFIYAGRVKALAEAVREKGI 120
>gi|424795694|ref|ZP_18221517.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|433679066|ref|ZP_20510848.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440732465|ref|ZP_20912394.1| 50S ribosomal protein L18 [Xanthomonas translucens DAR61454]
gi|422795352|gb|EKU24062.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|430815798|emb|CCP41393.1| 50S ribosomal protein L18 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440368746|gb|ELQ05771.1| 50S ribosomal protein L18 [Xanthomonas translucens DAR61454]
Length = 119
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L+S + A + +G+++AERA+ A + ++ R ++ G+I
Sbjct: 47 SKVIAAANTLQADVKDGLKSGKNSEAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 106 KALADAAREGGL 117
>gi|257454063|ref|ZP_05619337.1| ribosomal protein L18 [Enhydrobacter aerosaccus SK60]
gi|257448541|gb|EEV23510.1| ribosomal protein L18 [Enhydrobacter aerosaccus SK60]
Length = 116
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 131 SDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
S+I A A+G+++AERA+ A + ++ R K+ G+++A+ ++ +NG++
Sbjct: 65 SNIEAATAVGKLIAERAKAAGITKVAF-DRSGFKYHGRVKALAEAARENGLE 115
>gi|56707494|ref|YP_169390.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89255686|ref|YP_513047.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
LVS]
gi|110669965|ref|YP_666522.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
FSC198]
gi|115314187|ref|YP_762910.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
OSU18]
gi|134302570|ref|YP_001122540.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501635|ref|YP_001427700.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187932127|ref|YP_001892112.1| 50S ribosomal protein L18 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254367068|ref|ZP_04983103.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
257]
gi|254368638|ref|ZP_04984653.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
FSC022]
gi|254370817|ref|ZP_04986822.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
FSC033]
gi|290953197|ref|ZP_06557818.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
URFT1]
gi|379716683|ref|YP_005305019.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379716761|ref|YP_005305097.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725365|ref|YP_005317551.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
TI0902]
gi|385794103|ref|YP_005830509.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
NE061598]
gi|421752454|ref|ZP_16189479.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754320|ref|ZP_16191295.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
831]
gi|421754969|ref|ZP_16191927.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
80700075]
gi|421758051|ref|ZP_16194911.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
80700103]
gi|421759882|ref|ZP_16196706.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
70102010]
gi|422938182|ref|YP_007011329.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049996|ref|YP_007008430.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
F92]
gi|424675204|ref|ZP_18112113.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
70001275]
gi|73621595|sp|Q5NHV2.1|RL18_FRATT RecName: Full=50S ribosomal protein L18
gi|115504897|sp|Q2A5F4.1|RL18_FRATH RecName: Full=50S ribosomal protein L18
gi|122325775|sp|Q0BNR1.1|RL18_FRATO RecName: Full=50S ribosomal protein L18
gi|123169582|sp|Q14JA4.1|RL18_FRAT1 RecName: Full=50S ribosomal protein L18
gi|166218545|sp|A7N9U1.1|RL18_FRATF RecName: Full=50S ribosomal protein L18
gi|166218547|sp|A4IZR8.1|RL18_FRATW RecName: Full=50S ribosomal protein L18
gi|226723329|sp|B2SDW9.1|RL18_FRATM RecName: Full=50S ribosomal protein L18
gi|56603986|emb|CAG44974.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89143517|emb|CAJ78693.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
LVS]
gi|110320298|emb|CAL08357.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
FSC198]
gi|115129086|gb|ABI82273.1| ribosomal protein L18 [Francisella tularensis subsp. holarctica
OSU18]
gi|134050347|gb|ABO47418.1| ribosomal protein L18 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134252893|gb|EBA51987.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
257]
gi|151569060|gb|EDN34714.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
FSC033]
gi|156252238|gb|ABU60744.1| ribosomal protein L18 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121546|gb|EDO65731.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
FSC022]
gi|187713036|gb|ACD31333.1| 50S ribosomal protein L18 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|282158638|gb|ADA78029.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
NE061598]
gi|377826814|gb|AFB80062.1| LSU ribosomal protein L18p (L5e) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828360|gb|AFB78439.1| LSU ribosomal protein L18p (L5e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828438|gb|AFB78517.1| LSU ribosomal protein L18p (L5e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|407293333|gb|AFT92239.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
FSC200]
gi|409084844|gb|EKM85005.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
831]
gi|409085038|gb|EKM85191.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089513|gb|EKM89553.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
80700075]
gi|409089799|gb|EKM89831.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
70102010]
gi|409090621|gb|EKM90634.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
80700103]
gi|417434153|gb|EKT89121.1| 50S ribosomal protein L18 [Francisella tularensis subsp. tularensis
70001275]
gi|421950718|gb|AFX69967.1| 50S ribosomal protein L18 [Francisella tularensis subsp. holarctica
F92]
Length = 117
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ + R V A + S + A T KD+KA + ++ + +G I+A+R +E
Sbjct: 26 LCVYRTPRHVYAQVISGDGSTVLVAASTVEKDVKAKCKYTGNVESAAIVGEIIADRCKEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ ++ R K+ G+++A+V++ ++G+
Sbjct: 86 GISQVAF-DRSGYKYHGRVKALVEAAREHGL 115
>gi|291547995|emb|CBL21103.1| LSU ribosomal protein L18P [Ruminococcus sp. SR1/5]
Length = 122
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + K + A T KD+KA L + D+ A +G ++ ++A EA
Sbjct: 31 LAVFRSNKHIYAQIIDDTVGKTLVSASTLQKDVKAELENTDDVQAAAKVGTVIGKKAVEA 90
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + + R + GK++A+ + + G+
Sbjct: 91 GIESVVF-DRGGYIYHGKVKALADAAREAGL 120
>gi|54113103|gb|AAV29185.1| NT02FT0057 [synthetic construct]
Length = 117
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ + R V A + S + A T KD+KA + ++ + +G I+A+R +E
Sbjct: 26 LCVYRTPRHVYAQVISGDGSTVLVAASTVEKDVKAKCKYTGNVESAAIVGEIIADRCKEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ ++ R K+ G+++A+V++ ++G+
Sbjct: 86 GISQVAF-DRSGYKYHGRVKALVEAAREHGL 115
>gi|4733885|gb|AAD28638.1| unknown [Drosophila melanogaster]
Length = 186
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VS + H + + A T+ IK L +D A + +GR+LA+R +
Sbjct: 62 TLEINTSGRYVSGDVKH-FENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQ 120
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ + T K++ ++Q++ DNG+ K
Sbjct: 121 SGI--TEMTCNVEAVPGSKLQKLLQTIQDNGVSFK 153
>gi|20129927|ref|NP_610818.1| mitochondrial ribosomal protein L18 [Drosophila melanogaster]
gi|7303403|gb|AAF58460.1| mitochondrial ribosomal protein L18 [Drosophila melanogaster]
gi|21430134|gb|AAM50745.1| HL07956p [Drosophila melanogaster]
gi|220950076|gb|ACL87581.1| mRpL18-PA [synthetic construct]
gi|220959084|gb|ACL92085.1| mRpL18-PA [synthetic construct]
Length = 186
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VS + H + + A T+ IK L +D A + +GR+LA+R +
Sbjct: 62 TLEINTSGRYVSGDVKH-FENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQ 120
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ + T K++ ++Q++ DNG+ K
Sbjct: 121 SGI--TEMTCNVEAVPGSKLQKLLQTIQDNGVSFK 153
>gi|295135685|ref|YP_003586361.1| 50S ribosomal protein L18 [Zunongwangia profunda SM-A87]
gi|294983700|gb|ADF54165.1| 50S ribosomal protein L18 [Zunongwangia profunda SM-A87]
Length = 118
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + V K +A A + K++K ++SDI +G+ LA+RA++A
Sbjct: 29 LSVYRSNKEIYAQIIDDVAGKTLAAASSRDKEVKDASGTKSDIAEL--VGKNLADRAKKA 86
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V T S+ R + G+++++ + + G+
Sbjct: 87 GVETISF-DRGGYLYHGRVKSLAEGAREGGL 116
>gi|218440638|ref|YP_002378967.1| 50S ribosomal protein L18 [Cyanothece sp. PCC 7424]
gi|226723309|sp|B7KI02.1|RL18_CYAP7 RecName: Full=50S ribosomal protein L18
gi|218173366|gb|ACK72099.1| ribosomal protein L18 [Cyanothece sp. PCC 7424]
Length = 120
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + A + V + A T KD+K S + A A+G+++A+RA
Sbjct: 29 LAVFRSNNHIYAQVIDDVAQHTLVAASTLDKDLKGEFSSGATCEASEAVGKLVAQRALAK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + R + + G+IRA+ Q+ + G+D
Sbjct: 89 GIEKVVF-DRGGNLYHGRIRALAQAAREAGLD 119
>gi|292493405|ref|YP_003528844.1| carbohydrate kinase [Nitrosococcus halophilus Nc4]
gi|291582000|gb|ADE16457.1| carbohydrate kinase, YjeF related protein [Nitrosococcus halophilus
Nc4]
Length = 496
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 140 GRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
G +LA AR+A++Y A Y + DK RA Q+L+D+GI +
Sbjct: 67 GYVLARLARKAEMYVAVYQVGDADKLSADARAARQALLDSGIKI 110
>gi|255067442|ref|ZP_05319297.1| ribosomal protein L18 [Neisseria sicca ATCC 29256]
gi|255048237|gb|EET43701.1| ribosomal protein L18 [Neisseria sicca ATCC 29256]
Length = 117
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+S ++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGGNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G++RA+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVRALAEAARENGL 115
>gi|190572960|ref|YP_001970805.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia K279a]
gi|254521612|ref|ZP_05133667.1| ribosomal protein L18 [Stenotrophomonas sp. SKA14]
gi|424667220|ref|ZP_18104245.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia Ab55555]
gi|190010882|emb|CAQ44491.1| putative 50S ribosomal protein L18 [Stenotrophomonas maltophilia
K279a]
gi|219719203|gb|EED37728.1| ribosomal protein L18 [Stenotrophomonas sp. SKA14]
gi|401069355|gb|EJP77877.1| 50S ribosomal protein L18 [Stenotrophomonas maltophilia Ab55555]
gi|456738110|gb|EMF62787.1| LSU ribosomal protein L18p (L5e) [Stenotrophomonas maltophilia
EPM1]
Length = 117
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+ L++ + A +GRI+AERA+ A V ++ R ++ G+I
Sbjct: 45 SKVLAAANTTQTDVMEGLKNGKNADAAAKVGRIVAERAKAAGVEKVAF-DRSGYRYHGRI 103
Query: 170 RAVVQSLIDNGID 182
+A+ ++ + G+
Sbjct: 104 KALAEAAREAGLQ 116
>gi|163868634|ref|YP_001609843.1| 50S ribosomal protein L18 [Bartonella tribocorum CIP 105476]
gi|189041539|sp|A9IW06.1|RL18_BART1 RecName: Full=50S ribosomal protein L18
gi|161018290|emb|CAK01848.1| 50S ribosomal protein L18 [Bartonella tribocorum CIP 105476]
Length = 120
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S +D A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQVIDDLRGCTLVSASTLESDLKKSLKSGADKEAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++A+ ++ + G+
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|58038839|ref|YP_190803.1| 50S ribosomal protein L18 [Gluconobacter oxydans 621H]
gi|73621600|sp|Q5FTZ9.1|RL18_GLUOX RecName: Full=50S ribosomal protein L18
gi|58001253|gb|AAW60147.1| LSU ribosomal protein L18P [Gluconobacter oxydans 621H]
Length = 120
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A T K ++ ++ +D+ A IG+++AER A
Sbjct: 29 LSVFRSSKHIHAQIIDDAQGRTLASASTLEKTLRDAGKTGADVSAATVIGKLIAERGVAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V T + R + G+++A+ ++ + G+
Sbjct: 89 GVKTVVF-DRGSYLYHGRVKALAEAAREGGL 118
>gi|336430409|ref|ZP_08610356.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336018218|gb|EGN47970.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 122
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK ++ KH + R E L VF S + A + + A T KDI
Sbjct: 4 KKSRQEVRLNKHRKQRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLEKDI 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKI 169
KA L +++ A +G ++A+RA E + T Y +R F +GKI
Sbjct: 64 KAELEKTNNVDAAAYLGTVIAKRALEKGITTVVY---DRGGFIYQGKI 108
>gi|298370575|ref|ZP_06981890.1| ribosomal protein L18 [Neisseria sp. oral taxon 014 str. F0314]
gi|298281185|gb|EFI22675.1| ribosomal protein L18 [Neisseria sp. oral taxon 014 str. F0314]
Length = 117
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+S S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGSNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|346991273|ref|ZP_08859345.1| 50S ribosomal protein L18 [Ruegeria sp. TW15]
Length = 119
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V +A A T KD+ V ++++ A
Sbjct: 19 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVRGVTLASASTLEKDLGVV--GKNNVEAATK 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G +AERA++A V A Y R F GK++AV + + G+ +
Sbjct: 76 VGAAIAERAKKAGVEEA-YFDRGGFLFHGKVKAVADAAREGGLKI 119
>gi|83949772|ref|ZP_00958505.1| ribosomal protein L18 [Roseovarius nubinhibens ISM]
gi|83837671|gb|EAP76967.1| ribosomal protein L18 [Roseovarius nubinhibens ISM]
Length = 119
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V +A A + KD+ V +++I A
Sbjct: 19 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVNGVTLASASSMEKDLGVV--GKNNIEAATK 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G +AERA++A V A Y R F GK++A+ + + G+ +
Sbjct: 76 VGAAIAERAKKAGVVEA-YFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|427726128|ref|YP_007073405.1| 50S ribosomal protein L18 [Leptolyngbya sp. PCC 7376]
gi|427357848|gb|AFY40571.1| LSU ribosomal protein L18P [Leptolyngbya sp. PCC 7376]
Length = 120
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L +F S + + A + +A A T KD++A L S + A A+G ++A+RA E
Sbjct: 29 LAIFRSHKHIYAQVIDDDKQHTLAAASTLDKDLRAELASGGNTAASSAVGSLIAKRALEK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + R + + G+++A+ ++ + G+D
Sbjct: 89 GITKVVF-DRGGNLYHGRVKALAEAAREAGLD 119
>gi|56477610|ref|YP_159199.1| 50S ribosomal protein L18 [Aromatoleum aromaticum EbN1]
gi|73621549|sp|Q5P316.1|RL18_AZOSE RecName: Full=50S ribosomal protein L18
gi|56313653|emb|CAI08298.1| 50S ribosomal protein L18 [Aromatoleum aromaticum EbN1]
Length = 117
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF + + A + S+ +A A T D+++ L + + A +G++
Sbjct: 18 IAELKSVRLTVFRTNSHIYAQVIDGSGSRVLAAASTVEADVRSQLPNGGNKQAAQVVGKL 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AERA+ A V ++ R ++ G+++A+ ++ + G+
Sbjct: 78 IAERAKAAGVEAVAF-DRAGFQYHGRVKALAEAAREGGL 115
>gi|225076411|ref|ZP_03719610.1| hypothetical protein NEIFLAOT_01456 [Neisseria flavescens
NRL30031/H210]
gi|261380575|ref|ZP_05985148.1| ribosomal protein L18 [Neisseria subflava NJ9703]
gi|319639565|ref|ZP_07994312.1| 50S ribosomal protein L18 [Neisseria mucosa C102]
gi|224952259|gb|EEG33468.1| hypothetical protein NEIFLAOT_01456 [Neisseria flavescens
NRL30031/H210]
gi|284796543|gb|EFC51890.1| ribosomal protein L18 [Neisseria subflava NJ9703]
gi|317399136|gb|EFV79810.1| 50S ribosomal protein L18 [Neisseria mucosa C102]
Length = 117
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T ++++ L+S S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRSSLKSGSNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|430376155|ref|ZP_19430558.1| 50S ribosomal protein L18 [Moraxella macacae 0408225]
gi|429541386|gb|ELA09414.1| 50S ribosomal protein L18 [Moraxella macacae 0408225]
Length = 116
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 123 IKAVLRS--RSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG 180
+ A LRS S+I A A+G+++AERA+ A + ++ R K+ G+++A+ + +NG
Sbjct: 55 LDATLRSGATSNIEAATAVGKLIAERAKAAGITKVAF-DRSGFKYHGRVKALADAARENG 113
Query: 181 ID 182
++
Sbjct: 114 LE 115
>gi|399991398|ref|YP_006571638.1| 50S ribosomal protein L18 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400755759|ref|YP_006564127.1| 50S ribosomal protein L18 [Phaeobacter gallaeciensis 2.10]
gi|398654912|gb|AFO88882.1| 50S ribosomal protein L18 [Phaeobacter gallaeciensis 2.10]
gi|398655953|gb|AFO89919.1| 50S ribosomal protein L18 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 119
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V +A A T KD+ V ++++ A
Sbjct: 19 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVRGVTLASASTLEKDLGLV--GKNNVEAATK 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G ++AERA+ A V A Y R F GK++A+ + + G+ +
Sbjct: 76 VGSVIAERAKAAGVSEA-YFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|395839109|ref|XP_003792444.1| PREDICTED: 39S ribosomal protein L18, mitochondrial [Otolemur
garnettii]
Length = 180
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVA-GTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
L V ++ + A + H+ S Q+AV+ T IK L S ++ AC ++GR+LA+R E
Sbjct: 81 LRVIRTQHHIEAFVEHQ--SGQIAVSVSTREWAIKKHLYSTRNVVACESVGRVLAQRCLE 138
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
A + Y P + I + ++ + G+ ++
Sbjct: 139 AGINFMVYQPTPWEAASDSIIRLKNAITEGGVVLR 173
>gi|395765140|ref|ZP_10445756.1| 50S ribosomal protein L18 [Bartonella sp. DB5-6]
gi|395412993|gb|EJF79472.1| 50S ribosomal protein L18 [Bartonella sp. DB5-6]
Length = 120
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + + A T D+K L+S ++ A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLRGYTLVSASTLEGDLKKSLKSGANKEAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++A+ ++ + G+
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|354585412|ref|ZP_09004299.1| ribosomal protein L18 [Paenibacillus lactis 154]
gi|353188681|gb|EHB54201.1| ribosomal protein L18 [Paenibacillus lactis 154]
Length = 122
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K++K +H+ +++ E L+VF S + + A L V +A A T K++
Sbjct: 4 KQDKNKARLKRHLRVRKKIQGTAERPRLNVFRSSKHIYAQLIDDVAGVTLASASTLDKEL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ +++ ++ + +G ++A+RA E Y + R + G+I+A+ ++ + G++
Sbjct: 64 SSDIQNGGNVESARKVGELVAKRAAEKG-YKSVVFDRGGYLYHGRIQALAEAAREAGLE 121
>gi|326803048|ref|YP_004320866.1| 50S ribosomal protein L18 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651004|gb|AEA01187.1| ribosomal protein L18 [Aerococcus urinae ACS-120-V-Col10a]
Length = 121
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K + +H ++ E L V+ S + + A L V +A A D
Sbjct: 7 KPDKNALRQKRHARIRRNLSGTAECPRLSVYRSNKHIYAQLIDDVAGVTLASA----SDA 62
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ L S A+G+ +AER +EA V TA R ++ G+++A+ ++ +NG++
Sbjct: 63 NSELNKGSKTENAQAVGQAIAERGKEAGV-TAVVFDRGGYQYHGRVKALAEAARENGLE 120
>gi|261364871|ref|ZP_05977754.1| ribosomal protein L18 [Neisseria mucosa ATCC 25996]
gi|288566920|gb|EFC88480.1| ribosomal protein L18 [Neisseria mucosa ATCC 25996]
Length = 117
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+S S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGSNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|195029191|ref|XP_001987458.1| GH21928 [Drosophila grimshawi]
gi|193903458|gb|EDW02325.1| GH21928 [Drosophila grimshawi]
Length = 186
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ IS R+VSA + H + + A T+ IK L +D A + +GR+LA+R +
Sbjct: 63 TLEINISGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQ 121
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A + T K+ ++Q++ NG+
Sbjct: 122 AGI--TEMTCNVEAVAGSKLEKLLQTVQANGVS 152
>gi|428773992|ref|YP_007165780.1| 50S ribosomal protein L18 [Cyanobacterium stanieri PCC 7202]
gi|428688271|gb|AFZ48131.1| LSU ribosomal protein L18P [Cyanobacterium stanieri PCC 7202]
Length = 120
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
+H+ +++ E L VF S + A L V +A A T K+++ L S S+
Sbjct: 12 RHLRIRKKVTGTAERPRLAVFRSNLHIYAQLIDDVAQHTLASASTLDKELRDKLGSSSNC 71
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A +G+++A+RA + + R + + G+++A+ + + G++
Sbjct: 72 DASAEVGKLVAQRALSKGIEKVVF-DRGGNLYHGRVKALADAARETGLN 119
>gi|170723890|ref|YP_001751578.1| 50S ribosomal protein L18 [Pseudomonas putida W619]
gi|398843888|ref|ZP_10601005.1| ribosomal protein L18, bacterial type [Pseudomonas sp. GM84]
gi|226723365|sp|B1JAJ6.1|RL18_PSEPW RecName: Full=50S ribosomal protein L18
gi|169761893|gb|ACA75209.1| ribosomal protein L18 [Pseudomonas putida W619]
gi|310941805|dbj|BAJ24256.1| 50S ribosomal protein L18 [Pseudomonas fulva]
gi|398255120|gb|EJN40160.1| ribosomal protein L18, bacterial type [Pseudomonas sp. GM84]
Length = 116
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T KD++ + +I A +G+++AE
Sbjct: 22 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKDLRD--GATGNIDAATKVGKLVAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 80 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 115
>gi|383787024|ref|YP_005471593.1| 50S ribosomal protein L18 [Fervidobacterium pennivorans DSM 9078]
gi|383109871|gb|AFG35474.1| LSU ribosomal protein L18P [Fervidobacterium pennivorans DSM 9078]
Length = 122
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S++ + A + + + A T KDIK ++ ++ A +G+I+AERA
Sbjct: 31 LAVYRSEKHIYAQIIDDTVGRTLVAASTVEKDIKERVKKTWNVAAAKEVGKIIAERALAK 90
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ T + R K+ G+I+A+ + + G+
Sbjct: 91 GITTVVF-DRGGFKYHGRIKALADAAREAGL 120
>gi|373499250|ref|ZP_09589741.1| 50S ribosomal protein L18 [Fusobacterium sp. 12_1B]
gi|404369339|ref|ZP_10974679.1| 50S ribosomal protein L18 [Fusobacterium ulcerans ATCC 49185]
gi|313690722|gb|EFS27557.1| 50S ribosomal protein L18 [Fusobacterium ulcerans ATCC 49185]
gi|371959321|gb|EHO77012.1| 50S ribosomal protein L18 [Fusobacterium sp. 12_1B]
Length = 122
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K ++++ T KH+S + + + L V+ S + A L V + A T K++
Sbjct: 4 KVDRQAVRTRKHLSIRNKISGTADRPRLSVYRSNNNIFAQLIDDVNGVTLVSASTIDKEL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
KA + + ++ A +G+ LAERA + TA R K+ G+I
Sbjct: 64 KANIANGGNVEAAKTVGKALAERATGKGI-TAIVFDRSGYKYTGRI 108
>gi|260432462|ref|ZP_05786433.1| ribosomal protein L18 [Silicibacter lacuscaerulensis ITI-1157]
gi|260416290|gb|EEX09549.1| ribosomal protein L18 [Silicibacter lacuscaerulensis ITI-1157]
Length = 119
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V +A A T KD+ V +++I A
Sbjct: 19 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVRGVTLASASTLEKDLGVV--GKNNIEAATK 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G +AERA++A V A Y R F GK++A+ + + G+ +
Sbjct: 76 VGAAIAERAKKAGVEEA-YFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|397696215|ref|YP_006534098.1| 50S ribosomal protein L18 [Pseudomonas putida DOT-T1E]
gi|397332945|gb|AFO49304.1| 50S ribosomal protein L18 [Pseudomonas putida DOT-T1E]
Length = 98
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T KD++ + +I A +G+++AE
Sbjct: 4 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKDLRD--GATGNIDAATKVGKLVAE 61
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 62 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 97
>gi|319787909|ref|YP_004147384.1| 50S ribosomal protein L18 [Pseudoxanthomonas suwonensis 11-1]
gi|317466421|gb|ADV28153.1| ribosomal protein L18 [Pseudoxanthomonas suwonensis 11-1]
Length = 118
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + + + A L SK +A A T D+K L++ + A +G ++AERA+ A
Sbjct: 27 LSVLRTGQHLYAQLFTADGSKVIAAANTLQADVKEGLKNGKNTDAATKVGALIAERAKAA 86
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ ++ R +F G+I+A+ + + G+
Sbjct: 87 GIEKVAF-DRSGYRFHGRIKALADAAREGGL 116
>gi|26987211|ref|NP_742636.1| 50S ribosomal protein L18 [Pseudomonas putida KT2440]
gi|148545755|ref|YP_001265857.1| 50S ribosomal protein L18 [Pseudomonas putida F1]
gi|167031516|ref|YP_001666747.1| 50S ribosomal protein L18 [Pseudomonas putida GB-1]
gi|386010129|ref|YP_005928406.1| protein RplR [Pseudomonas putida BIRD-1]
gi|395446853|ref|YP_006387106.1| 50S ribosomal protein L18 [Pseudomonas putida ND6]
gi|421524878|ref|ZP_15971499.1| 50S ribosomal protein L18 [Pseudomonas putida LS46]
gi|73621674|sp|Q88QL9.1|RL18_PSEPK RecName: Full=50S ribosomal protein L18
gi|166218840|sp|A5VXR3.1|RL18_PSEP1 RecName: Full=50S ribosomal protein L18
gi|189041567|sp|B0KK83.1|RL18_PSEPG RecName: Full=50S ribosomal protein L18
gi|24981849|gb|AAN66100.1|AE016238_18 ribosomal protein L18 [Pseudomonas putida KT2440]
gi|148509813|gb|ABQ76673.1| LSU ribosomal protein L18P [Pseudomonas putida F1]
gi|166858004|gb|ABY96411.1| ribosomal protein L18 [Pseudomonas putida GB-1]
gi|310941004|dbj|BAJ24376.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|310941034|dbj|BAJ24391.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|310941064|dbj|BAJ24406.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|310941094|dbj|BAJ24421.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|310941625|dbj|BAJ24166.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|310941985|dbj|BAJ24346.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|313496835|gb|ADR58201.1| RplR [Pseudomonas putida BIRD-1]
gi|388560850|gb|AFK69991.1| 50S ribosomal protein L18 [Pseudomonas putida ND6]
gi|402751341|gb|EJX11854.1| 50S ribosomal protein L18 [Pseudomonas putida LS46]
Length = 116
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T KD++ + +I A +G+++AE
Sbjct: 22 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKDLRD--GATGNIDAATKVGKLVAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 80 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 115
>gi|310941925|dbj|BAJ24316.1| 50S ribosomal protein L18 [Pseudomonas putida]
Length = 116
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T KD++ + +I A +G+++AE
Sbjct: 22 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKDLRD--GATGNIDAATKVGKLVAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + G++
Sbjct: 80 RAKAAGVSQVAF-DRSGFKYHGRVKALADGAREGGLE 115
>gi|345874169|ref|ZP_08825985.1| 50S ribosomal protein L18 [Neisseria weaveri LMG 5135]
gi|343970814|gb|EGV38985.1| 50S ribosomal protein L18 [Neisseria weaveri LMG 5135]
Length = 117
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 74 KHISFKQRT------VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVL 127
KHI+ +R +A ++ L VF + + A + + +A A T +++ +L
Sbjct: 3 KHITRLRRARKTRARIADLKVIRLCVFRTNNHIYAQVISAEGDRVLAQASTLEAEVRTML 62
Query: 128 RSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+S S++ A IG+ +AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 63 KSGSNVEAATLIGKRIAEKAKAVGVERVAF-DRSGFQYHGRVKALAEAARENGLS 116
>gi|291397220|ref|XP_002715030.1| PREDICTED: mitochondrial ribosomal protein L18 [Oryctolagus
cuniculus]
Length = 180
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAV-AGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
L V ++ V A + H S QV V A T IK L ++ AC ++GR+LA+R E
Sbjct: 81 LRVIRTQHHVEALVEH--PSGQVVVSASTREWAIKKHLYRTRNVVACESLGRVLAQRCLE 138
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A + Y P + ++ + ++ + G+
Sbjct: 139 AGINFMVYQPTPWEAASDSLKCLQNAMTEGGV 170
>gi|333376297|ref|ZP_08468083.1| 50S ribosomal protein L18 [Kingella kingae ATCC 23330]
gi|332968435|gb|EGK07502.1| 50S ribosomal protein L18 [Kingella kingae ATCC 23330]
Length = 117
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF + + A + K +A A T +++ L+S ++ A +G+
Sbjct: 18 IADLKMVRLCVFRTNSHIYAQIISAEGDKVLAAASTVEAEVRGSLKSGGNVEAATVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+AE+A+ A + ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAAGIEKVAF-DRSGFQYHGRVKALAEAARENGLS 116
>gi|407800515|ref|ZP_11147375.1| ribosomal protein L18 [Oceaniovalibus guishaninsula JLT2003]
gi|407057434|gb|EKE43410.1| ribosomal protein L18 [Oceaniovalibus guishaninsula JLT2003]
Length = 119
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V +A A + K++ V ++++ A
Sbjct: 19 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVNGVTLASASSLEKELGIV--GKNNVEAAAK 75
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G+ +AERAR A V A+Y R F GK++A+ ++ + G+ +
Sbjct: 76 VGQAIAERARAAGV-EAAYFDRGGFLFHGKVKALAEAAREGGLKL 119
>gi|408823545|ref|ZP_11208435.1| 50S ribosomal protein L18 [Pseudomonas geniculata N1]
Length = 117
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+ L++ + A +GRI+AERA+ A + ++ R ++ G+I
Sbjct: 45 SKVLAAANTTQTDVMEGLKNGKNADAAAKVGRIVAERAKAAGIEKVAF-DRSGYRYHGRI 103
Query: 170 RAVVQSLIDNGID 182
+A+ ++ + G+
Sbjct: 104 KALAEAAREAGLQ 116
>gi|56751889|ref|YP_172590.1| 50S ribosomal protein L18 [Synechococcus elongatus PCC 6301]
gi|81301026|ref|YP_401234.1| 50S ribosomal protein L18 [Synechococcus elongatus PCC 7942]
gi|3122684|sp|O24704.1|RL18_SYNP6 RecName: Full=50S ribosomal protein L18
gi|115502812|sp|Q31L22.1|RL18_SYNE7 RecName: Full=50S ribosomal protein L18
gi|2446905|dbj|BAA22464.1| 50S ribosomal protein L18 [Synechococcus elongatus PCC 6301]
gi|56686848|dbj|BAD80070.1| 50S ribosomal protein L18 [Synechococcus elongatus PCC 6301]
gi|81169907|gb|ABB58247.1| LSU ribosomal protein L18P [Synechococcus elongatus PCC 7942]
Length = 120
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + A + +A A + D++ L S + A A+G+++AERA+
Sbjct: 29 LSVFRSNNHIYAQVIDDAAGHTLAAASSLDPDLRQSLTSGGNQQASAAVGKLIAERAQAK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V T + R + + G+++A+ ++ + G++
Sbjct: 89 GVTTVVFD-RGGNLYHGRVKALAEAAREAGLE 119
>gi|83594004|ref|YP_427756.1| 50S ribosomal protein L18 [Rhodospirillum rubrum ATCC 11170]
gi|386350756|ref|YP_006049004.1| 50S ribosomal protein L18 [Rhodospirillum rubrum F11]
gi|115504944|sp|Q2RQX6.1|RL18_RHORT RecName: Full=50S ribosomal protein L18
gi|83576918|gb|ABC23469.1| LSU ribosomal protein L18P [Rhodospirillum rubrum ATCC 11170]
gi|346719192|gb|AEO49207.1| 50S ribosomal protein L18P [Rhodospirillum rubrum F11]
Length = 120
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + + A T K+++ L D A +G++LAERA+ A
Sbjct: 29 LSVFRSNKHMYAQIIDDAEGRTLVSASTVDKELRGNLTKGGDKAAAAEVGKLLAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
YT R K+ G+++A+ + + G+
Sbjct: 89 G-YTEVVFDRGGYKYHGRVQALADAAREAGL 118
>gi|387885969|ref|YP_006316268.1| 50S ribosomal protein L18 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386870785|gb|AFJ42792.1| 50S ribosomal protein L18 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 117
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ + R V A + S +A A T KD+KA + ++ + +G I+A R +E
Sbjct: 26 LCVYRTPRHVYAQVISGDGSTVLAAASTVEKDVKAKCKYTGNVNSAAIVGEIIANRCKEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ ++ R K+ G+++A+ ++ ++G+
Sbjct: 86 GISKVAF-DRSGYKYHGRVKALAEAAREHGLQ 116
>gi|407701514|ref|YP_006826301.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Black Sea
11']
gi|407250661|gb|AFT79846.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Black Sea
11']
Length = 117
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 98 RFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASY 157
R + A L S+ +A A T KD+ L+S + A +G+ +AERA E + T ++
Sbjct: 33 RHIYAQLIAPCGSEVLAAASTVEKDLAKGLKSTGNAEAATVVGKAIAERALEKGIKTVAF 92
Query: 158 TPRERDKFEGKIRAVVQSLIDNGI 181
R ++ G+++A+ + + G+
Sbjct: 93 -DRSGFQYHGRVKALADAAREAGL 115
>gi|160894739|ref|ZP_02075514.1| hypothetical protein CLOL250_02290 [Clostridium sp. L2-50]
gi|156863673|gb|EDO57104.1| ribosomal protein L18 [Clostridium sp. L2-50]
Length = 122
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 65 KEKKSK-NTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KE +S+ KH+ + + L VF S + A + + A T K I
Sbjct: 4 KESRSEVRIKKHMRVRNHLAGTADRPRLAVFRSNNHMYAQIIDDSVGNTIVAASTVEKSI 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
K L ++ A +G+++AERA E + T + +R F +GK++A+ + + G+
Sbjct: 64 KEALEQTDNVDAAAYVGKVVAERALEKGIKTVVF---DRGGFIYQGKVQALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 E 121
>gi|383788785|ref|YP_005473354.1| 50S ribosomal protein L18 [Caldisericum exile AZM16c01]
gi|381364422|dbj|BAL81251.1| 50S ribosomal protein L18 [Caldisericum exile AZM16c01]
Length = 122
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L +FIS + V A L + + A T KD+K ++ S A+G+++AERA
Sbjct: 31 LSLFISLKHVYAQLIDDEHGRTLVSASTLDKDLKETVKDMSLTEKAKAVGKLIAERALAK 90
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ T + R K+ G+++A+ + G+
Sbjct: 91 GIETVVF-DRSGYKYHGRVKALADEARNAGL 120
>gi|340758479|ref|ZP_08695065.1| 50S ribosomal protein L18 [Fusobacterium varium ATCC 27725]
gi|251836740|gb|EES65274.1| 50S ribosomal protein L18 [Fusobacterium varium ATCC 27725]
Length = 122
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K ++++ T KH+S + + + L V+ S + A L V + A T K++
Sbjct: 4 KVDRQAVRTRKHLSIRSKISGTADRPRLSVYRSNNNIFAQLIDDVNGVTLVSASTIDKEL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
KA + + ++ A +G+ LAERA + TA R K+ G+I
Sbjct: 64 KANIANGGNVEAAKTVGKALAERATGKGI-TAIVFDRSGYKYTGRI 108
>gi|83814539|ref|YP_445183.1| 50S ribosomal protein L18 [Salinibacter ruber DSM 13855]
gi|115504951|sp|Q2S3P8.1|RL18_SALRD RecName: Full=50S ribosomal protein L18
gi|83755933|gb|ABC44046.1| ribosomal protein L18 [Salinibacter ruber DSM 13855]
Length = 119
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KKEK + H S ++ L V+ S + A L + + A T + D+
Sbjct: 5 KKEKVERRQRIHDSIRESMFGTSVRPRLSVYRSNEHIYAQLVDDMEGHTLTSASTLADDV 64
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+ + ++G +LAERA +A + A + R K++G++RA+ + D G+ +
Sbjct: 65 EG----ETPTEESRSVGELLAERAEDAGIDKAVFD-RGGYKYQGRVRALAEGARDGGLQL 119
>gi|58427784|gb|AAW76821.1| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 90
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A + +G+++AERA+ A + ++ R ++ G+I
Sbjct: 18 SKVIAAANTLQADVKDGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 76
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 77 KALADAAREGGL 88
>gi|415886263|ref|ZP_11548086.1| 50S ribosomal protein L18 [Bacillus methanolicus MGA3]
gi|387588916|gb|EIJ81237.1| 50S ribosomal protein L18 [Bacillus methanolicus MGA3]
Length = 120
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L+VF S + + A L V +A A T KD+ L S ++ A +G ++A+RA E
Sbjct: 31 LNVFRSNKHIYAQLIDDVNGVTLASASTLDKDLN--LESTGNVEAAQKVGELVAKRAIEK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + + R + G+++A+ ++ +NG++
Sbjct: 89 GIKSVVF-DRGGYLYHGRVKALAEAARENGLE 119
>gi|254487973|ref|ZP_05101178.1| ribosomal protein L18 [Roseobacter sp. GAI101]
gi|214044842|gb|EEB85480.1| ribosomal protein L18 [Roseobacter sp. GAI101]
Length = 119
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +SA L V +A A T KD+ V +++I A +G +A+RA +A
Sbjct: 30 LSVHRSNKNISAQLIDDVNGVTLASASTLEKDLGVV--GKNNIEAATKVGSAIADRAIKA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V T +Y R F GK++A+ + + G+ +
Sbjct: 88 GV-TEAYFDRGGFLFHGKVKALADAAREGGLKI 119
>gi|399055822|ref|ZP_10743472.1| ribosomal protein L18, bacterial type [Brevibacillus sp. CF112]
gi|433543276|ref|ZP_20499686.1| 50S ribosomal protein L18 [Brevibacillus agri BAB-2500]
gi|398046685|gb|EJL39279.1| ribosomal protein L18, bacterial type [Brevibacillus sp. CF112]
gi|432185405|gb|ELK42896.1| 50S ribosomal protein L18 [Brevibacillus agri BAB-2500]
Length = 120
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H+ ++R + L+VF S + + A L T V +A +S D
Sbjct: 4 KADKNKARKKRHLRIRKRVIGSAIRPRLNVFRSSKHIYAQLIDDATG--VTLASASSLDK 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ L++ +++ A A+G ++A+RA+E T R + G+I+A+ ++ + G+
Sbjct: 62 ELGLKNGANVEAAAAVGTLIAKRAQEKGA-TEVIFDRGGYIYHGRIKALAEAAREAGL 118
>gi|194099936|ref|YP_002003074.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae NCCP11945]
gi|427826442|ref|ZP_18993493.1| ribosomal L18p/L5e family protein [Neisseria meningitidis H44/76]
gi|193935226|gb|ACF31050.1| 50S ribosomal protein L18 [Neisseria gonorrhoeae NCCP11945]
gi|316985685|gb|EFV64631.1| ribosomal L18p/L5e family protein [Neisseria meningitidis H44/76]
Length = 90
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 93 VFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADV 152
+F S + A + K +A A T +++ L+S S++ A +G+ +AE+A+ A V
Sbjct: 1 MFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGV 60
Query: 153 YTASYTPRERDKFEGKIRAVVQSLIDNGI 181
++ R ++ G+++A+ ++ +NG+
Sbjct: 61 EKVAF-DRSGFQYHGRVKALAEAARENGL 88
>gi|325921497|ref|ZP_08183352.1| LSU ribosomal protein L18P [Xanthomonas gardneri ATCC 19865]
gi|325548044|gb|EGD19043.1| LSU ribosomal protein L18P [Xanthomonas gardneri ATCC 19865]
Length = 119
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A + +G+++AERA+ A + ++ R ++ G+I
Sbjct: 47 SKVIAAANTLQADVKEGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 106 KALADAAREGGL 117
>gi|404330465|ref|ZP_10970913.1| 50S ribosomal protein L18 [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 120
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK+K +H+ + R V E L+VF S + + A L SK + +A ++S D
Sbjct: 4 KKDKNLIRQRRHMHVRHRVVGTSERPRLNVFRSSKNIYAQLID--DSKGITLASSSSLDK 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L SD+ A +G + + A E + T + R + G++ AV + G+
Sbjct: 62 ALGLEKGSDVAAAKKVGEAIGKEALEKGIETVVF-DRSGYLYHGRVEAVADGAREAGL 118
>gi|163796903|ref|ZP_02190860.1| 50S ribosomal protein L30 [alpha proteobacterium BAL199]
gi|159177892|gb|EDP62441.1| 50S ribosomal protein L30 [alpha proteobacterium BAL199]
Length = 108
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + + A + KD+KA +++ +D A + +G+++AERA+ A
Sbjct: 17 LSVFRSSKHIYAQVIDDAGGRTLVAASSLDKDLKARIKTGADKAAAVEVGKLVAERAKAA 76
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R F G+++A+ + + G+
Sbjct: 77 GLEEVVF-DRGGYIFHGRVKALADAAREAGL 106
>gi|295398304|ref|ZP_06808346.1| 50S ribosomal protein L18 [Aerococcus viridans ATCC 11563]
gi|294973443|gb|EFG49228.1| 50S ribosomal protein L18 [Aerococcus viridans ATCC 11563]
Length = 121
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H + E L+VF S + + A L V VA A TN + +
Sbjct: 7 KPDKNKLRQKRHARVRSNISGTAECPRLNVFRSNKHIYAQLIDDVAGVTVASASTNEETL 66
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A ++ S A L +G+ +AER A V + R ++ G+++A+ + +NG++
Sbjct: 67 SAATKTES---AAL-VGKAIAERGVAAGVKVVKF-DRGGYQYHGRVQALADAARENGLE 120
>gi|332142190|ref|YP_004427928.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552212|gb|AEA98930.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 121
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 98 RFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASY 157
R + A L S+ +A A T KD+ L+S + A +G+ +AERA E + T ++
Sbjct: 37 RHIYAQLIAPCGSEVLAAASTVEKDLAKDLKSTGNAEAATVVGKAIAERALEKGIKTVAF 96
Query: 158 TPRERDKFEGKIRAVVQSLIDNGI 181
R ++ G+++A+ + + G+
Sbjct: 97 -DRSGFQYHGRVKALADAAREAGL 119
>gi|83312213|ref|YP_422477.1| 50S ribosomal protein L18 [Magnetospirillum magneticum AMB-1]
gi|115504907|sp|Q2W2K7.1|RL18_MAGMM RecName: Full=50S ribosomal protein L18
gi|82947054|dbj|BAE51918.1| Ribosomal protein L18 [Magnetospirillum magneticum AMB-1]
Length = 120
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + + + +A A T K++K L++ +D A A+G+++AERA+ A
Sbjct: 29 LSVFRSGKNIYVQVIDDLNGVTLAAASTLDKELKGNLKTGADKEAAAAVGKLIAERAKAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ + + G+
Sbjct: 89 GITEVVF-DRGGYIYHGRVKALADAAREGGL 118
>gi|157101232|dbj|BAF79947.1| receptor-like kinase [Marchantia polymorpha]
Length = 1168
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 19 GEKAIRPF--LYVPTSSLHQGQVLNA---PRSFFGVEDFLDDDNSRPYTYKKEKKSKNTT 73
G +A+RP ++ L G L+A P+ D ++ + RP + K + +NTT
Sbjct: 326 GARAVRPLPTFFLTMMFLDVGPELDAGPPPKPRLVYVDLVERYHGRPQSGYKRRWIRNTT 385
Query: 74 KHISFKQRTVAYMEPFTLDV--FISKRFVSASLTHRVTSKQV 113
+F QR Y +PF D F R V++SL + S ++
Sbjct: 386 VPHNFTQRWYNYKQPFFYDEARFTVSRHVNSSLPAMINSAEL 427
>gi|226323026|ref|ZP_03798544.1| hypothetical protein COPCOM_00798 [Coprococcus comes ATCC 27758]
gi|225208593|gb|EEG90947.1| ribosomal protein L18 [Coprococcus comes ATCC 27758]
Length = 122
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH + R E L VF S + A + + A T KD+
Sbjct: 4 KKSRSEVRVNKHRKLRNRFSGTAERPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLQKDV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G ++A++A E + + + +R F GKI+A+ + + G+
Sbjct: 64 KAELEKTNNVEAAAYLGTVIAKKAIEKGITSVVF---DRGGFIYHGKIKALADAAREAGL 120
Query: 182 D 182
+
Sbjct: 121 N 121
>gi|295109490|emb|CBL23443.1| LSU ribosomal protein L18P [Ruminococcus obeum A2-162]
Length = 122
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 65 KEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
+EKK + H++ T P L VF S + + A + K + A T KD+K
Sbjct: 11 REKKHRRIRHHLNGTATT-----P-RLAVFRSNKHMYAQIIDDTVGKTLVSASTLQKDVK 64
Query: 125 AVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A L + D+ A +G ++ ++A EA + + + R + GK++A+ + + G+
Sbjct: 65 AELENTDDVKAAAYLGTVIGKKAVEAGIESVVF-DRGGYIYHGKVKALADAAREAGL 120
>gi|222529714|ref|YP_002573596.1| 50S ribosomal protein L18 [Caldicellulosiruptor bescii DSM 6725]
gi|312622061|ref|YP_004023674.1| 50S ribosomal protein L18 [Caldicellulosiruptor kronotskyensis
2002]
gi|222456561|gb|ACM60823.1| ribosomal protein L18 [Caldicellulosiruptor bescii DSM 6725]
gi|312202528|gb|ADQ45855.1| ribosomal protein L18 [Caldicellulosiruptor kronotskyensis 2002]
Length = 124
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 63 YKK-EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 121
YKK + K +H +++ E L V+ S +++ A + + A +
Sbjct: 4 YKKVNRNEKRLIRHKRIRKKVFGTSERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSLEP 63
Query: 122 DIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IK+ L S I A +G+++AERA+E + T R + G+++A+ ++ G+
Sbjct: 64 EIKSRLSSTKSIEAAEYVGKVIAERAKEKGI-TKVVFDRGGYPYHGRVKALAEAARQGGL 122
Query: 182 D 182
+
Sbjct: 123 E 123
>gi|387823824|ref|YP_005823295.1| 50S ribosomal protein L18 [Francisella cf. novicida 3523]
gi|328675423|gb|AEB28098.1| LSU ribosomal protein L18p (L5e) [Francisella cf. novicida 3523]
Length = 117
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 71 NTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSR 130
N +K K R + + L V+ + R V A + S + A T KD+KA +
Sbjct: 9 NRSKRTRIKLRELGHTR---LCVYRTPRHVYAQVISGDGSTVLVAASTVEKDVKAKCKYT 65
Query: 131 SDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
++ + +G I+A R +E + ++ R K+ G+++A+ ++ ++G+
Sbjct: 66 GNVESAAIVGEIIANRCKEKGISQVAF-DRSGYKYHGRVKALAEAAREHGLQ 116
>gi|195402547|ref|XP_002059866.1| GJ15001 [Drosophila virilis]
gi|194140732|gb|EDW57203.1| GJ15001 [Drosophila virilis]
Length = 190
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VSA + H + + A T+ IK L D A + +GR+LA+R +
Sbjct: 62 TLEINTSGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTKDTSAFVNLGRVLAQRCLQ 120
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
A + T K+ ++Q++ +NG+ +
Sbjct: 121 AGI--TEMTCNVNAVAGSKLEKLLQAVQENGVSFQ 153
>gi|338739382|ref|YP_004676344.1| 50S ribosomal protein L18 [Hyphomicrobium sp. MC1]
gi|337759945|emb|CCB65776.1| 50S ribosomal protein L18 [Hyphomicrobium sp. MC1]
Length = 120
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + A + V +A A T KD+K L++ +D A AIG+++AERA +A
Sbjct: 29 LSVHRSSENIYAQVIDDVKGVTLAAASTLEKDVKGTLKTGADKAAAAAIGKLVAERAVKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R F G+++A+ + + G+
Sbjct: 89 GVTEVVF-DRGSFLFHGRVKALADAAREGGL 118
>gi|406598285|ref|YP_006749415.1| 50S ribosomal protein L18 [Alteromonas macleodii ATCC 27126]
gi|407685275|ref|YP_006800449.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'English
Channel 673']
gi|407689212|ref|YP_006804385.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|410863186|ref|YP_006978420.1| 50S ribosomal protein L18 [Alteromonas macleodii AltDE1]
gi|406375606|gb|AFS38861.1| 50S ribosomal protein L18 [Alteromonas macleodii ATCC 27126]
gi|407246886|gb|AFT76072.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'English
Channel 673']
gi|407292592|gb|AFT96904.1| 50S ribosomal protein L18 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|410820448|gb|AFV87065.1| 50S ribosomal protein L18 [Alteromonas macleodii AltDE1]
Length = 117
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 98 RFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASY 157
R + A L S+ +A A T KD+ L+S + A +G+ +AERA E + T ++
Sbjct: 33 RHIYAQLIAPCGSEVLAAASTVEKDLAKDLKSTGNAEAATVVGKAIAERALEKGIKTVAF 92
Query: 158 TPRERDKFEGKIRAVVQSLIDNGI 181
R ++ G+++A+ + + G+
Sbjct: 93 -DRSGFQYHGRVKALADAAREAGL 115
>gi|381153116|ref|ZP_09864985.1| ribosomal protein L18, bacterial type [Methylomicrobium album BG8]
gi|380885088|gb|EIC30965.1| ribosomal protein L18, bacterial type [Methylomicrobium album BG8]
Length = 117
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAV 172
+A A TN IKA + +I A +G+++AERA A + ++ R K+ G+++A+
Sbjct: 48 LASASTNQAAIKAAVGYTGNIKAAAEVGKVIAERALAAGITEVAF-DRSGFKYHGRVKAL 106
Query: 173 VQSLIDNGI 181
++ + G+
Sbjct: 107 AEAAREAGL 115
>gi|167626790|ref|YP_001677290.1| 50S ribosomal protein L18 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254875920|ref|ZP_05248630.1| 50S ribosomal protein L18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|189041553|sp|B0U0X3.1|RL18_FRAP2 RecName: Full=50S ribosomal protein L18
gi|167596791|gb|ABZ86789.1| 50S ribosomal protein L18 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841941|gb|EET20355.1| 50S ribosomal protein L18 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 117
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ + R V A + S +A A T KD+KA + ++ + +G ++A R +E
Sbjct: 26 LCVYRTPRHVYAQVISGDGSTVLAAASTVEKDVKAKCKYTGNVNSAAIVGEVIANRCKEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ ++ R K+ G+++A+ ++ ++G+
Sbjct: 86 GISQVAF-DRSGYKYHGRVKALAEAAREHGLQ 116
>gi|78044632|ref|YP_361102.1| 50S ribosomal protein L18 [Carboxydothermus hydrogenoformans
Z-2901]
gi|115504879|sp|Q3A9T2.1|RL18_CARHZ RecName: Full=50S ribosomal protein L18
gi|77996747|gb|ABB15646.1| ribosomal protein L18 [Carboxydothermus hydrogenoformans Z-2901]
Length = 122
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
+H+ +++ E L+V+ S + + A + V+ + + A T +++ + +I
Sbjct: 14 RHLRVRKKIHGTPERPRLNVYRSLKHIYAQIIDDVSGRTLVAASTLDPELRGKIGYGGNI 73
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A A+GR++AERA+ + + R + G+++A+ ++ + G+
Sbjct: 74 EAAKAVGRLIAERAKAKGIEKVVFD-RGGYLYHGRVKALAEAAREGGLQ 121
>gi|345867028|ref|ZP_08819046.1| ribosomal protein L18 [Bizionia argentinensis JUB59]
gi|344048523|gb|EGV44129.1| ribosomal protein L18 [Bizionia argentinensis JUB59]
Length = 118
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + VT + ++ A + KDI + ++S+I +G+ +AERA +A
Sbjct: 29 LSVFRSNKEIYAQVVDDVTGRTISAASSRDKDISSAKGTKSEIATL--VGKSVAERALKA 86
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ T S+ R + G+++++ + + G+
Sbjct: 87 GINTISF-DRGGSLYHGRVKSLAEGAREAGL 116
>gi|387128150|ref|YP_006296755.1| 50S ribosomal protein L18 [Methylophaga sp. JAM1]
gi|386275212|gb|AFI85110.1| LSU ribosomal protein L18p (L5e) [Methylophaga sp. JAM1]
Length = 117
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E + L + + R + A + +SK VA A T ++K L ++ A +G+ +A+
Sbjct: 21 LEVYRLTIHRTPRHIYAQVLTHDSSKVVASASTLDPEVKKALEGTGNVAAAELVGKTVAQ 80
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
RA + + ++ R + G+++A+ + +NG+
Sbjct: 81 RAAKEGITQVAF-DRSGFSYHGRVKALADAARENGL 115
>gi|333805289|dbj|BAK26443.1| 50S ribosomal protein L18 [Bacillus niacini]
Length = 120
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L+VF S + + A L ++ +A A T KD+ L S S++ A +G ++A+RA E
Sbjct: 31 LNVFRSNKHLYAQLIDDMSGVTLASASTIEKDLN--LESTSNVEAAKLVGELVAKRAVEK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ TA R + G+I+A+ + +NG+
Sbjct: 89 GI-TAVVFDRGGYLYHGRIQALADAARENGL 118
>gi|294669840|ref|ZP_06734899.1| hypothetical protein NEIELOOT_01733 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308233|gb|EFE49476.1| hypothetical protein NEIELOOT_01733 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 117
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+S S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRDSLKSGSNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|113476564|ref|YP_722625.1| 50S ribosomal protein L18 [Trichodesmium erythraeum IMS101]
gi|122964707|sp|Q110C2.1|RL18_TRIEI RecName: Full=50S ribosomal protein L18
gi|110167612|gb|ABG52152.1| LSU ribosomal protein L18P [Trichodesmium erythraeum IMS101]
Length = 120
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 74 KHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDI 133
+H +++ E L VF S + A + + A T ++K+ ++S ++
Sbjct: 12 RHRRVRKKVFGTSERPRLSVFRSNMHIYAQVIDDTKQHTLVAASTLEAEVKSTIKSGANC 71
Query: 134 PACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A + IG+++A+R+ E + + R + + G+++A+ ++ + G+D
Sbjct: 72 DASIQIGKLIAQRSLEKGIEKVVF-DRGGNLYHGRVKALAEAAREAGLD 119
>gi|1710505|sp|P52863.1|RL18_VIBPR RecName: Full=50S ribosomal protein L18
gi|1208546|gb|AAB41329.1| ribosomal protein L18 [Vibrio proteolyticus]
Length = 117
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R V A + S+ +A A T K I+ +++ ++ A A+G+ +AERA E
Sbjct: 26 LVVHRTPRHVYAQVIASNGSEVIAAASTVEKAIREQVKNTGNVDAAKAVGKAIAERALEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V T ++ R ++ G++ A+ +S + G+
Sbjct: 86 GVETVAF-DRSGFQYHGRVAALAESAREAGL 115
>gi|188575506|ref|YP_001912435.1| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|226723400|sp|B2SQS6.1|RL18_XANOP RecName: Full=50S ribosomal protein L18
gi|188519958|gb|ACD57903.1| ribosomal protein L18 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 119
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A + +G+++AERA+ A + ++ R ++ G+I
Sbjct: 47 SKVIAAANTLQADVKDGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 106 KALADAAREGGL 117
>gi|323490639|ref|ZP_08095844.1| 50S ribosomal protein L18 [Planococcus donghaensis MPA1U2]
gi|323395731|gb|EGA88572.1| 50S ribosomal protein L18 [Planococcus donghaensis MPA1U2]
Length = 120
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K + +H + + + L+VF S +++ A L + +A A + KD
Sbjct: 4 KLDKNASRKKRHARVRSKITGTAQRPRLNVFRSNKYIYAQLIDDMNGVTLASASSMEKDF 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L S ++ A +G +A+RA E + + + R + G+++A+ ++ +NG+
Sbjct: 64 S--LESTGNVEAATKVGETIAKRATENGLKSVVF-DRGGYLYHGRVKALAEAARENGL 118
>gi|104779771|ref|YP_606269.1| 50S ribosomal protein L18 [Pseudomonas entomophila L48]
gi|166218838|sp|Q1IFV0.1|RL18_PSEE4 RecName: Full=50S ribosomal protein L18
gi|95108758|emb|CAK13452.1| 50S ribosomal subunit protein L18 [Pseudomonas entomophila L48]
Length = 116
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T K+++ + +I A +G+++AE
Sbjct: 22 LEAVRLCVFRSSQHIYAQVISADGSKVLASASTLDKELRD--GATGNIDAATKVGKLVAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 80 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 115
>gi|21230380|ref|NP_636297.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769626|ref|YP_244388.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992838|ref|YP_001904848.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. campestris
str. B100]
gi|325916503|ref|ZP_08178772.1| LSU ribosomal protein L18P [Xanthomonas vesicatoria ATCC 35937]
gi|73621735|sp|Q8PC36.1|RL18_XANCP RecName: Full=50S ribosomal protein L18
gi|81304419|sp|Q4URF5.1|RL18_XANC8 RecName: Full=50S ribosomal protein L18
gi|226723399|sp|B0RU66.1|RL18_XANCB RecName: Full=50S ribosomal protein L18
gi|21111936|gb|AAM40221.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574958|gb|AAY50368.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734598|emb|CAP52808.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. campestris]
gi|325537292|gb|EGD09019.1| LSU ribosomal protein L18P [Xanthomonas vesicatoria ATCC 35937]
Length = 119
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A + +G+++AERA+ A + ++ R ++ G+I
Sbjct: 47 SKVIAAANTLQADVKDGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 106 KALADAAREGGL 117
>gi|416176338|ref|ZP_11609588.1| ribosomal protein L18 [Neisseria meningitidis M6190]
gi|416189990|ref|ZP_11615470.1| ribosomal protein L18 [Neisseria meningitidis ES14902]
gi|433491628|ref|ZP_20448731.1| ribosomal protein L18 [Neisseria meningitidis NM586]
gi|433501967|ref|ZP_20458940.1| ribosomal protein L18 [Neisseria meningitidis NM126]
gi|325133070|gb|EGC55742.1| ribosomal protein L18 [Neisseria meningitidis M6190]
gi|325139048|gb|EGC61594.1| ribosomal protein L18 [Neisseria meningitidis ES14902]
gi|432231313|gb|ELK86980.1| ribosomal protein L18 [Neisseria meningitidis NM586]
gi|432243722|gb|ELK99228.1| ribosomal protein L18 [Neisseria meningitidis NM126]
Length = 117
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+ S++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKFGSNVEAAAIVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ A V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAAGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|84625028|ref|YP_452400.1| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|161898968|ref|YP_202206.2| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|289665153|ref|ZP_06486734.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289669360|ref|ZP_06490435.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. musacearum
NCPPB 4381]
gi|384418055|ref|YP_005627415.1| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|73621736|sp|Q5GWV0.2|RL18_XANOR RecName: Full=50S ribosomal protein L18
gi|115502820|sp|Q2P001.1|RL18_XANOM RecName: Full=50S ribosomal protein L18
gi|84368968|dbj|BAE70126.1| 50S ribosomal protein L18 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|353460969|gb|AEQ95248.1| ribosomal protein L18 [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 119
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A + +G+++AERA+ A + ++ R ++ G+I
Sbjct: 47 SKVIAAANTLQADVKDGLKNGKNSDAAVKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 106 KALADAAREGGL 117
>gi|386828738|ref|ZP_10115845.1| ribosomal protein L18, bacterial type [Beggiatoa alba B18LD]
gi|386429622|gb|EIJ43450.1| ribosomal protein L18, bacterial type [Beggiatoa alba B18LD]
Length = 117
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 80 QRTVAYMEPFT---LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
QRT A ++ L V + R + A + K +A A T K ++ + +I A
Sbjct: 12 QRTRAKIKVLGSHRLCVHKTPRHIYAQVITPEGDKVLASASTLDKTLREQIGYGGNIAAA 71
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+A+G+ +AERA+ A V ++ R K+ G+++A+ + +NG++
Sbjct: 72 VAVGKAIAERAKAAGVSEIAF-DRSGFKYHGRVKALADAARENGLN 116
>gi|340360973|ref|ZP_08683423.1| 50S ribosomal protein L18 [Neisseria macacae ATCC 33926]
gi|349611062|ref|ZP_08890376.1| 50S ribosomal protein L18 [Neisseria sp. GT4A_CT1]
gi|339889204|gb|EGQ78589.1| 50S ribosomal protein L18 [Neisseria macacae ATCC 33926]
gi|348614950|gb|EGY64485.1| 50S ribosomal protein L18 [Neisseria sp. GT4A_CT1]
Length = 117
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T +++ L+S ++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSGGNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|326799144|ref|YP_004316963.1| 50S ribosomal protein L18 [Sphingobacterium sp. 21]
gi|326549908|gb|ADZ78293.1| ribosomal protein L18 [Sphingobacterium sp. 21]
Length = 117
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
++E+ K KH+S E L V+ S + + A + VT K + A ++SKD
Sbjct: 8 RRERIKKGIRKHLS------GSAERPRLSVYRSNKGIYAQVIDDVTGKTLVSASSSSKDF 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
A S + A+G+++AE+A+ A + + R + G+++++ + + G+D
Sbjct: 62 NA---SGTKSEQSKAVGKLIAEKAKAAGINQVVF-DRNGYLYHGRVKSLAEGAREGGLD 116
>gi|409357889|ref|ZP_11236257.1| 50S ribosomal protein L18 [Dietzia alimentaria 72]
Length = 131
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 67 KKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAV 126
++ T +H +++ E L V S R + A + + +A A T D++A
Sbjct: 18 RRESRTRRHYRLRKKVSGTPERPRLVVNRSSRHIHAQIIDDLAGHTLAAASTIEADVRAS 77
Query: 127 LRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ D A +G++LAERA+ A + + R +K+ G+I ++ ++ + G++
Sbjct: 78 EGDKKDRSA--KVGQLLAERAKAAGIEAVVF-DRGGNKYHGRIASLAEAAREGGLE 130
>gi|222085691|ref|YP_002544221.1| 50S ribosomal protein L18 [Agrobacterium radiobacter K84]
gi|398377365|ref|ZP_10535540.1| ribosomal protein L18, bacterial type [Rhizobium sp. AP16]
gi|254799696|sp|B9JDU4.1|RL18_AGRRK RecName: Full=50S ribosomal protein L18
gi|221723139|gb|ACM26295.1| ribosomal protein L18 [Agrobacterium radiobacter K84]
gi|397726703|gb|EJK87135.1| ribosomal protein L18, bacterial type [Rhizobium sp. AP16]
Length = 120
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
++VA P L V S + + + K +A A T KD++ L++ +D A +G
Sbjct: 20 KSVANGRP-RLSVHRSSKNIYVQVIDDAAGKTLASASTLDKDLRGSLKTGADTAAAALVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
+++AERA +A V + +R F G+I+A+ ++ + G+
Sbjct: 79 KLVAERATKAGVKEVVF---DRGAFIYHGRIKALAEAAREGGL 118
>gi|238922845|ref|YP_002936358.1| 50S ribosomal protein L18 [Eubacterium rectale ATCC 33656]
gi|259646100|sp|C4ZBT4.1|RL18_EUBR3 RecName: Full=50S ribosomal protein L18
gi|238874517|gb|ACR74224.1| 50S ribosomal protein L18 [Eubacterium rectale ATCC 33656]
gi|291523746|emb|CBK89333.1| LSU ribosomal protein L18P [Eubacterium rectale DSM 17629]
gi|291528788|emb|CBK94374.1| LSU ribosomal protein L18P [Eubacterium rectale M104/1]
Length = 122
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KK + KH + + L VF S + A + + A T KDI
Sbjct: 4 KKSRTEVRVKKHNRMRNHLAGTAQRPRLAVFRSNNHMYAQIIDDTVGNTLVSASTLDKDI 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
KA L +++ A +G ++A++A + + T + +R F GK++A+ ++ + G+
Sbjct: 64 KAELEKTNNVDAAAKLGTVIAKKALDKGISTVVF---DRGGFIYAGKVKALAEAAREAGL 120
Query: 182 D 182
D
Sbjct: 121 D 121
>gi|395789484|ref|ZP_10469004.1| 50S ribosomal protein L18 [Bartonella taylorii 8TBB]
gi|395430027|gb|EJF96079.1| 50S ribosomal protein L18 [Bartonella taylorii 8TBB]
Length = 120
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
V+ S + + A + + + A T D+K L++ +D A A+G+++AERA++A
Sbjct: 29 FSVYRSNQNIYAQIIDDLRGCTLVSASTLEGDLKKSLKTGADKEAAFAVGKLIAERAKQA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++A+ ++ + G+
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKALAEAAREGGL 118
>gi|337754265|ref|YP_004646776.1| 50S ribosomal protein L18 [Francisella sp. TX077308]
gi|336445870|gb|AEI35176.1| LSU ribosomal protein L18p (L5e) [Francisella sp. TX077308]
Length = 117
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ + + V A + S +A A T KD+KA + ++ + +G ++A R +E
Sbjct: 26 LCVYRTPKHVYAQVISGDGSTVIAAASTVEKDVKAKCKYTGNVNSAAIVGEVIANRCKEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ ++ R K+ G+++A+ ++ ++G+
Sbjct: 86 GISQVAF-DRSGYKYHGRVKALAEAAREHGLQ 116
>gi|365889704|ref|ZP_09428371.1| 50S ribosomal subunit protein L18 [Bradyrhizobium sp. STM 3809]
gi|365334569|emb|CCE00902.1| 50S ribosomal subunit protein L18 [Bradyrhizobium sp. STM 3809]
Length = 120
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A + K+++A + +DI A A+G++LAERA +A
Sbjct: 29 LSVFRSSKHIYAQVIDDQKGETLASASSMEKEMRAAGNTGADIDAAKAVGKLLAERAVKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ + ++G+
Sbjct: 89 GIKEVVF-DRGGYLYHGRVKALADAARESGL 118
>gi|94969425|ref|YP_591473.1| periplasmic sensor diguanylate phophodiesterase [Candidatus
Koribacter versatilis Ellin345]
gi|94551475|gb|ABF41399.1| periplasmic sensor diguanylate phosphodiesterase [Candidatus
Koribacter versatilis Ellin345]
Length = 506
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 123 IKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
I AV +D P C + R LAE+ A ++ T R + + RA +QSL++ GI+
Sbjct: 344 INAVAEQITDTPFCANLLRRLAEKRIPAKNFSVEITERHQFPDLDRGRAALQSLVEAGIE 403
Query: 183 VKI 185
+K+
Sbjct: 404 IKL 406
>gi|365539194|ref|ZP_09364369.1| 50S ribosomal protein L18 [Vibrio ordalii ATCC 33509]
Length = 117
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R V A + S+ +A A T K I+ ++++ ++ A A+G+ +AERA E
Sbjct: 26 LVVHRTPRHVYAQVIASNGSEVIAAASTVEKAIRELIKNTGNVDAAKAVGKAIAERALEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V ++ R ++ G++ A+ +S + G+
Sbjct: 86 GVSAVAF-DRSGFQYHGRVAALAESAREAGL 115
>gi|89070540|ref|ZP_01157829.1| ribosomal protein L18 [Oceanicola granulosus HTCC2516]
gi|89043847|gb|EAR50045.1| ribosomal protein L18 [Oceanicola granulosus HTCC2516]
Length = 119
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +S L + K +A A + KD+ V +++ A +G +AERA+ A
Sbjct: 30 LSVHRSNKNISVQLIDDLQGKTLASASSLEKDLGIV--GSNNLEAAAKVGSAIAERAKAA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V A + R F GKI+A+ + + G+ V
Sbjct: 88 GVTEAQF-DRGGFLFHGKIKALADAAREGGLKV 119
>gi|126736621|ref|ZP_01752361.1| ribosomal protein L18 [Roseobacter sp. CCS2]
gi|126713934|gb|EBA10805.1| ribosomal protein L18 [Roseobacter sp. CCS2]
Length = 121
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +S L V +A A + KD+ V ++++ A +G +AERA++A
Sbjct: 32 LSVHRSNKNISVQLIDDVNGVTLASASSLEKDLGVV--GKNNVEAASKVGTAIAERAKKA 89
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V A Y R F GKI+A+ + + G+ +
Sbjct: 90 GVEVA-YFDRGGFLFHGKIKALADAAREGGLKI 121
>gi|261378057|ref|ZP_05982630.1| ribosomal protein L18 [Neisseria cinerea ATCC 14685]
gi|269145507|gb|EEZ71925.1| ribosomal protein L18 [Neisseria cinerea ATCC 14685]
Length = 117
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L VF S + A + K +A A T ++++ L+S ++ A +G+
Sbjct: 18 IADLKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRSSLKSGGNVEAAAVVGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ V ++ R ++ G+++A+ ++ +NG+
Sbjct: 78 IAEKAKAVGVEKVAF-DRSGFQYHGRVKALAEAARENGL 115
>gi|388457575|ref|ZP_10139870.1| 50S ribosomal protein L18 [Fluoribacter dumoffii Tex-KL]
Length = 119
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 107 RVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFE 166
++ K + TN K+IKA L + + +G++L +RA E + ++ R K+
Sbjct: 44 KLGDKVLVACSTNDKEIKASLTGKCKVEQANLVGKLLGKRASERGITQVAF-DRAGYKYH 102
Query: 167 GKIRAVVQSLIDNGID 182
G+++A+ + + G+D
Sbjct: 103 GRVKALAEGAREAGLD 118
>gi|390332393|ref|XP_796565.2| PREDICTED: 39S ribosomal protein L18, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 93 VFISK--RFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
+F++K R ++A + H + V A T IK L S SD+ A +GR+LA+R E+
Sbjct: 121 LFVTKTNRHITARIEH-IKGDIVVQASTKEWAIKKHLYSTSDVSASENLGRVLADRCLES 179
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + ++ DK + + + +L + G+
Sbjct: 180 GINFVHNSMKKMDKEQEGMAVFLCALEEGGL 210
>gi|350553093|ref|ZP_08922279.1| ribosomal protein L18 [Thiorhodospira sibirica ATCC 700588]
gi|349791944|gb|EGZ45814.1| ribosomal protein L18 [Thiorhodospira sibirica ATCC 700588]
Length = 117
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+ + L V + R + A + S+ +A A T +K L+ ++ A +++GR++AE
Sbjct: 21 LGAYRLSVHRTPRHIYAQVLGPSGSEVLACASTVETVVKQDLKGTGNVAAAVSVGRLIAE 80
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA + ++ R K+ G+++A+ + + G++
Sbjct: 81 RALAKGIKQVAF-DRSGFKYHGRVKALADAAREGGLE 116
>gi|149192385|ref|ZP_01870586.1| 50S ribosomal protein L18 [Vibrio shilonii AK1]
gi|148833776|gb|EDL50812.1| 50S ribosomal protein L18 [Vibrio shilonii AK1]
Length = 117
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R V A + S+ +A A T K I+ ++S +I A A+G+ +AERA E
Sbjct: 26 LVVHRTPRHVYAQVIAANGSEVIAAASTVEKAIREEVKSTGNIDAAKAVGKAIAERALEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V ++ R ++ G++ A+ +S + G+
Sbjct: 86 GVSAVAF-DRSGFQYHGRVAALAESAREAGL 115
>gi|374852488|dbj|BAL55420.1| 50S ribosomal protein L18 [uncultured beta proteobacterium]
Length = 117
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L V+ S + A +T SK +A A T SK+++ +++ ++ A +G+
Sbjct: 18 IAQLKKIRLVVYRSNAHMYAQITTSDGSKVLAAASTLSKELRDQVKNGGNVAAAALVGKA 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ + + ++ R + G+++A+ ++ + G+
Sbjct: 78 IAEKAKALGIESVAF-DRSGYLYHGRVKALAEAAREAGL 115
>gi|384228477|ref|YP_005620212.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539410|gb|AEO08277.1| 50S ribosomal protein L18 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 122
Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 77 SFKQRT-VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPA 135
S K R + + L + + R + A + + SK A A T K+I + L+ + A
Sbjct: 16 SMKTRCKIKKLGAMRLVIHRTSRHMYAQIISSIESKVFAYASTLEKNINSNLKYTGNKIA 75
Query: 136 CLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQS 175
+G+I+AERA + ++ S+ R K+ G+I+ + +S
Sbjct: 76 AALVGKIIAERALKKGIHCVSF-DRSGFKYHGRIKVLAES 114
>gi|19704949|ref|NP_602444.1| 50S ribosomal protein L18P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296329204|ref|ZP_06871705.1| 50S ribosomal protein L18 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|73621596|sp|Q8RIH2.1|RL18_FUSNN RecName: Full=50S ribosomal protein L18
gi|19712851|gb|AAL93743.1| LSU ribosomal protein L18P [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|296153560|gb|EFG94377.1| 50S ribosomal protein L18 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 122
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K ++K+ K +S + + E L VF S + A L V + A T K +
Sbjct: 4 KVDRKASRQKKQMSIRNKISGTPERPRLSVFRSNTNIFAQLIDDVNGVTLVSASTIDKAL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADV 152
K + + +I A A+G+ +AERA+E +
Sbjct: 64 KGSIANGGNIEAAKAVGKAIAERAKEKGI 92
>gi|408790011|ref|ZP_11201645.1| LSU ribosomal protein L18p (L5e) [Lactobacillus florum 2F]
gi|408520750|gb|EKK20784.1| LSU ribosomal protein L18p (L5e) [Lactobacillus florum 2F]
Length = 118
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 67 KKSKNTTK---HISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K SKN T+ H + + E LDVF S + + A L V +A A T ++I
Sbjct: 4 KPSKNKTRKARHARVRSKIAGTAECPRLDVFRSNKNIYAQLIDDVAGVTLASASTLDQEI 63
Query: 124 KAVLRSRSDIPACLA-IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
KA D A A +G ++A+RA+ A++ + R + G+++A+ ++ +NG++
Sbjct: 64 KA-----GDKTAQAAEVGALVAKRAQAANLKHVVF-DRGGYLYHGRVQALAEAARENGLE 117
>gi|408402821|ref|YP_006860804.1| 50S ribosomal protein L18p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408363417|gb|AFU57147.1| 50S ribosomal protein L18p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 223
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/97 (19%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI--KAVLRSRSDIPACLAIGRILAERAR 148
+ V +S + ++A + + + +A +S+++ + + +++PAC G ++A++A
Sbjct: 1 MTVKVSDQNIAAQVLKPTPTGDIVIASAHSRELEKQGWKGALNNLPACYLTGMLMAKKAL 60
Query: 149 EADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKI 185
E V A +D F ++ A ++ ++D G+ + +
Sbjct: 61 EKGVKNAVLY-VGKDHFTSRVAACMKGIVDGGVSMPV 96
>gi|227821772|ref|YP_002825742.1| 50S ribosomal protein L18 [Sinorhizobium fredii NGR234]
gi|254799741|sp|C3MAZ6.1|RL18_RHISN RecName: Full=50S ribosomal protein L18
gi|227340771|gb|ACP24989.1| 50S ribosomal protein L18 [Sinorhizobium fredii NGR234]
Length = 120
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
+ VA P L V S + + A + V K +A A T D+K+ L++ +D A A+G
Sbjct: 20 KAVANGRP-RLSVHRSSKNIYAQIIDDVAGKTIAAASTLEADLKSALKTGADTAAATAVG 78
Query: 141 RILAERAREADVYTASYTPRERDKF--EGKIRAVVQSLIDNGID 182
++LAERA +A V + +R F G+++A+ ++ + G++
Sbjct: 79 KLLAERASKAGVKDVVF---DRGAFIYHGRVKALAEAAREGGLN 119
>gi|417408270|gb|JAA50696.1| Putative 39s ribosomal protein l18 mitochondrial, partial [Desmodus
rotundus]
Length = 163
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ + A L R + V A T IK L S + AC ++GR+LA R EA
Sbjct: 64 LRVIRTQHHIEA-LVERPNGQAVVSASTREWAIKKHLYSTRSVVACESVGRVLAARCLEA 122
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVK 184
+ Y P + ++ + ++ + G+ ++
Sbjct: 123 GINFMVYQPTPWEAASDSMQRLQSAMTEGGVVLR 156
>gi|312793923|ref|YP_004026846.1| 50S ribosomal protein L18 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181063|gb|ADQ41233.1| ribosomal protein L18 [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 124
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 63 YKK-EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 121
YKK + K +H +++ E L V+ S +++ A + + A +
Sbjct: 4 YKKVNRNEKRLIRHKRIRKKVFGTSERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSLEP 63
Query: 122 DIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IK+ L S I A +G+++AERA+E + T R + G+++A+ ++ G+
Sbjct: 64 EIKSRLSSTKSIEAAEYVGKVIAERAKEKGI-TKVVFDRGGYPYHGRVKALAEAARQAGL 122
Query: 182 D 182
+
Sbjct: 123 E 123
>gi|414342996|ref|YP_006984517.1| 50S ribosomal protein L18 [Gluconobacter oxydans H24]
gi|411028331|gb|AFW01586.1| 50S ribosomal protein L18 [Gluconobacter oxydans H24]
gi|453330331|dbj|GAC87559.1| 50S ribosomal protein L18 [Gluconobacter thailandicus NBRC 3255]
Length = 120
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A T K+++ S +++ A IG+++AER A
Sbjct: 29 LSVFRSSKHIHAQIIDDAQGRTLASASTLEKELRGNGTSGANVDAASVIGKLIAERGLAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V TA R + G+++A+ ++ + G+
Sbjct: 89 GV-TAVVFDRGAYVYHGRVKALAEAAREGGL 118
>gi|395784139|ref|ZP_10463978.1| 50S ribosomal protein L18 [Bartonella melophagi K-2C]
gi|395423894|gb|EJF90082.1| 50S ribosomal protein L18 [Bartonella melophagi K-2C]
Length = 120
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + +A A T +++ L+S SD A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLRGCTLASACTLEGELRKSLKSGSDKAAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++ + ++ + G+
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKVLAEAAREGGL 118
>gi|296131852|ref|YP_003639099.1| 50S ribosomal protein L18 [Thermincola potens JR]
gi|296030430|gb|ADG81198.1| ribosomal protein L18 [Thermincola potens JR]
Length = 122
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 66 EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 125
++K+ +H+ +++ E L VF S + A + + A T ++
Sbjct: 6 DRKAIKAKRHLRVRKKVFGTPERPRLSVFRSLNHIYAQIIDDTKGHTIVAASTLEPELGK 65
Query: 126 VLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
L S+S++ A A+G+ +AE+A V + R + G+I+A+ + + G+D
Sbjct: 66 RLSSKSNVEAAQAVGKAIAEKALAKGVKRVVFD-RGGHIYHGRIKALADAAREAGLD 121
>gi|420146282|ref|ZP_14653710.1| 50S ribosomal protein L18 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402013|gb|EJN55412.1| 50S ribosomal protein L18 [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 121
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H+ + + E L+VF S + + A L V +A A T K++
Sbjct: 7 KPDKNKTRQKRHLRVRGKISGTAERPRLNVFRSNKNIYAQLIDDVAGVTLASASTLDKEV 66
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+A S A A+G ++A+RA A + R + G+++A+ ++ +NG+D
Sbjct: 67 EA----SSKTEAAKAVGELIAKRAVAAGHENVVF-DRGGYLYHGRVQALAEAARENGLD 120
>gi|312127242|ref|YP_003992116.1| 50S ribosomal protein L18 [Caldicellulosiruptor hydrothermalis 108]
gi|311777261|gb|ADQ06747.1| ribosomal protein L18 [Caldicellulosiruptor hydrothermalis 108]
Length = 122
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 63 YKK-EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 121
YKK + K +H +++ E L V+ S +++ A + + A +
Sbjct: 2 YKKVNRNEKRLIRHKRIRKKVFGTSERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSLEP 61
Query: 122 DIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IK+ L S I A +G+++AERA+E + T R + G+++A+ ++ G+
Sbjct: 62 EIKSRLSSTKSIEAAEYVGKVIAERAKEKGI-TKVVFDRGGYPYHGRVKALAEAARQAGL 120
Query: 182 D 182
+
Sbjct: 121 E 121
>gi|91791555|ref|YP_561206.1| 50S ribosomal protein L18 [Shewanella denitrificans OS217]
gi|123166581|sp|Q12SU3.1|RL18_SHEDO RecName: Full=50S ribosomal protein L18
gi|91713557|gb|ABE53483.1| LSU ribosomal protein L18P [Shewanella denitrificans OS217]
Length = 116
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
+A A T K +K +L+S ++ A A+G+I+AERA E V ++ R K+ G++
Sbjct: 47 LAAASTVEKTVKELLKSTGNVDAAKAVGKIVAERAIEKGVAIVAF-DRSGFKYHGRV 102
>gi|338730517|ref|YP_004659909.1| 50S ribosomal protein L18P [Thermotoga thermarum DSM 5069]
gi|335364868|gb|AEH50813.1| LSU ribosomal protein L18P [Thermotoga thermarum DSM 5069]
Length = 122
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K+++K K +H+ +++ E L V+ S++ + A + + A T +++
Sbjct: 4 KEDRKLKRKKRHLRIRKKIFGTPERPRLCVYRSEKHIYAQIIDDTIGHTLVAASTLDREL 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
L+ +I A +G+++A+RA + + R KF G+++A+ + + G+
Sbjct: 64 AGKLKKTYNIEAAREVGKLIAQRALAKGITQVVF-DRGGFKFHGRVKALADAAREAGL 120
>gi|312135480|ref|YP_004002818.1| 50S ribosomal protein L18 [Caldicellulosiruptor owensensis OL]
gi|311775531|gb|ADQ05018.1| ribosomal protein L18 [Caldicellulosiruptor owensensis OL]
Length = 124
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 63 YKK-EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 121
YKK + K +H +++ E L V+ S +++ A + + A +
Sbjct: 4 YKKVNRNEKRLIRHKRIRKKVFGTSERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSIEP 63
Query: 122 DIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IK+ L S I A +G+++AERA+E + T R + G+++A+ ++ G+
Sbjct: 64 EIKSRLSSTKSIEAAEYVGKVIAERAKEKGI-TKVVFDRGGYPYHGRVKALAEAARQAGL 122
Query: 182 D 182
+
Sbjct: 123 E 123
>gi|428213121|ref|YP_007086265.1| 50S ribosomal protein L18 [Oscillatoria acuminata PCC 6304]
gi|428001502|gb|AFY82345.1| LSU ribosomal protein L18P [Oscillatoria acuminata PCC 6304]
Length = 120
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A T +KA L + + A +G+++A+RARE
Sbjct: 29 LSVFRSHQHIYAQVIDDTQHQTLAAASTLDPALKAELETGATCDASAKVGKLIADRAREK 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + R + + G+++A+ ++ + G++
Sbjct: 89 GIEKVVFD-RGGNLYHGRVKALAEAAREAGLE 119
>gi|294507067|ref|YP_003571125.1| 50S ribosomal protein L18 [Salinibacter ruber M8]
gi|294343395|emb|CBH24173.1| 50S ribosomal protein L18 [Salinibacter ruber M8]
Length = 119
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
KKEK + H S ++ L V+ S + A L + + A + + D+
Sbjct: 5 KKEKVERRQRIHDSIRESMFGTSVRPRLSVYRSNEHIYAQLVDDMEGHTLTSASSLADDV 64
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+ + ++G +LAERA +A + A + R K++G++RA+ + D G+ +
Sbjct: 65 EG----ETPTEESRSVGELLAERAEDAGIDKAVFD-RGGYKYQGRVRALAEGARDGGLQL 119
>gi|220935476|ref|YP_002514375.1| 50S ribosomal protein L18 [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254799754|sp|B8GV42.1|RL18_THISH RecName: Full=50S ribosomal protein L18
gi|219996786|gb|ACL73388.1| 50S ribosomal protein L18 [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 117
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R + A + S+ VA A T ++ L+ ++ A +AIG+++AERA+
Sbjct: 26 LCVHRTPRHIYAQVIAPNGSEVVAAASTVEVELAKDLKGTGNVDAAVAIGKVIAERAKAK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V ++ R K+ G+++A+ + + G+
Sbjct: 86 GVSEVAF-DRSGFKYHGRVKALADAAREGGL 115
>gi|308513331|ref|NP_953884.2| 50S ribosomal protein L18 [Geobacter sulfurreducens PCA]
gi|409913286|ref|YP_006891751.1| 50S ribosomal protein L18 [Geobacter sulfurreducens KN400]
gi|73621598|sp|Q749A3.1|RL18_GEOSL RecName: Full=50S ribosomal protein L18
gi|41152769|gb|AAR36234.2| ribosomal protein L18 [Geobacter sulfurreducens PCA]
gi|298506872|gb|ADI85595.1| ribosomal protein L18 [Geobacter sulfurreducens KN400]
Length = 122
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L+VF S + + A + T + A T K+ L ++ A +G ++A+RA E
Sbjct: 31 LNVFKSAQHIYAQIIDDTTGTTLVSASTVQKEASESLNHCGNVEAAKRVGALIAKRALEK 90
Query: 151 DVYTASYTPRERDKF--EGKIRAVVQSLIDNGI 181
++ T + +R+ F G+I+A+ S +NG+
Sbjct: 91 NIATVVF---DRNGFLYHGRIKALADSARENGL 120
>gi|365896271|ref|ZP_09434353.1| 50S ribosomal subunit protein L18 [Bradyrhizobium sp. STM 3843]
gi|365422984|emb|CCE06895.1| 50S ribosomal subunit protein L18 [Bradyrhizobium sp. STM 3843]
Length = 120
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + + +A A + K+++ V + ++I A A+G++LAERA +A
Sbjct: 29 LSVFRSSKHIYAQVIDDLKGETLASASSMEKEMRTVGNTGANIDAAKAVGKLLAERAVKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ + ++G+
Sbjct: 89 GIKEVVF-DRGGYLYHGRVKALADAARESGL 118
>gi|357028793|ref|ZP_09090818.1| 50S ribosomal protein L18 [Mesorhizobium amorphae CCNWGS0123]
gi|355537493|gb|EHH06749.1| 50S ribosomal protein L18 [Mesorhizobium amorphae CCNWGS0123]
Length = 119
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAV 172
+A A T KD+K L++ +D A AIG+++AERA +A V + R + G+++A+
Sbjct: 50 IAAASTLEKDLKGSLKTGADTAAAAAIGKLIAERASKAGVKEVVF-DRGPYIYHGRVKAL 108
Query: 173 VQSLIDNGI 181
++ + G+
Sbjct: 109 AEAAREGGL 117
>gi|373106832|ref|ZP_09521132.1| 50S ribosomal protein L18 [Stomatobaculum longum]
gi|371651771|gb|EHO17197.1| 50S ribosomal protein L18 [Stomatobaculum longum]
Length = 122
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K+ +K+ KH + + L VF S + A + + + A T K+
Sbjct: 4 KESRKAVREKKHWRMRSHLSGTAQRPRLSVFRSNSHMYAQIIDDTVGRTLVAASTLEKEA 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
K+ L + A +G+++AERA+E + +A R + GKI+A+ + + G+
Sbjct: 64 KSALEHTDTVEAAAYVGKLIAERAKEQGI-SAVVFDRGGFLYTGKIQALADAAREAGL 120
>gi|433775482|ref|YP_007305949.1| ribosomal protein L18, bacterial type [Mesorhizobium australicum
WSM2073]
gi|433667497|gb|AGB46573.1| ribosomal protein L18, bacterial type [Mesorhizobium australicum
WSM2073]
Length = 119
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAV 172
+A A T KD+K L++ +D A AIG+++AERA +A V + R + G+++A+
Sbjct: 50 IAAASTLEKDLKGSLKTGADTAAAAAIGKLIAERATKAGVKEVVF-DRGAYIYHGRVKAL 108
Query: 173 VQSLIDNGI 181
++ + G+
Sbjct: 109 AEAAREGGL 117
>gi|333396591|ref|ZP_08478408.1| 50S ribosomal protein L18 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|336392499|ref|ZP_08573898.1| 50S ribosomal protein L18 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 118
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K +K +H+ + + E L+VF S + + A L V +A A T K++
Sbjct: 4 KPDKNKTRQKRHLRVRGKISGTAERPRLNVFRSNKNIYAQLIDDVAGVTLASASTLDKEV 63
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+A S A A+G ++A+RA A + R + G+++A+ ++ +NG+D
Sbjct: 64 EA----SSKTEAAKAVGELIAKRAVAAGHENVVF-DRGGYLYHGRVQALAEAARENGLD 117
>gi|254785095|ref|YP_003072523.1| 50S ribosomal protein L18 [Teredinibacter turnerae T7901]
gi|259646118|sp|C5BQ77.1|RL18_TERTT RecName: Full=50S ribosomal protein L18
gi|237685818|gb|ACR13082.1| ribosomal protein L18 [Teredinibacter turnerae T7901]
Length = 116
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 98 RFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASY 157
R + A + + K +A A T KD+++ + +I A A+G+++AERA+ A V ++
Sbjct: 34 RHIYAQIISPESDKVLASASTLDKDLRSG--ATGNIDAATAVGKLIAERAKAAGVTKVAF 91
Query: 158 TPRERDKFEGKIRAVVQSLIDNGID 182
R KF G+++A+ + ++G++
Sbjct: 92 -DRSGFKFHGRVKALADAARESGLE 115
>gi|118496868|ref|YP_897918.1| 50S ribosomal protein L18 [Francisella novicida U112]
gi|194324091|ref|ZP_03057865.1| ribosomal protein L18 [Francisella novicida FTE]
gi|208780317|ref|ZP_03247658.1| ribosomal protein L18 [Francisella novicida FTG]
gi|254372225|ref|ZP_04987716.1| 50S ribosomal protein L18 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254373707|ref|ZP_04989190.1| hypothetical protein FTDG_01490 [Francisella novicida GA99-3548]
gi|385792191|ref|YP_005825167.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|166218546|sp|A0Q4J9.1|RL18_FRATN RecName: Full=50S ribosomal protein L18
gi|118422774|gb|ABK89164.1| 50S ribosomal protein L18 [Francisella novicida U112]
gi|151569954|gb|EDN35608.1| 50S ribosomal protein L18 [Francisella novicida GA99-3549]
gi|151571428|gb|EDN37082.1| hypothetical protein FTDG_01490 [Francisella novicida GA99-3548]
gi|194321538|gb|EDX19022.1| ribosomal protein L18 [Francisella tularensis subsp. novicida FTE]
gi|208743685|gb|EDZ89988.1| ribosomal protein L18 [Francisella novicida FTG]
gi|328676337|gb|AEB27207.1| LSU ribosomal protein L18p (L5e) [Francisella cf. novicida Fx1]
Length = 117
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ + R V A + S + A T KD+KA + ++ + +G I+A R +E
Sbjct: 26 LCVYRTPRHVYAQVISGDGSTVLVAASTVEKDVKAKCKYTGNVESAAIVGEIIANRCKEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ ++ R K+ G+++A+ ++ ++G+
Sbjct: 86 GISQVAF-DRSGYKYHGRVKALAEAAREHGLQ 116
>gi|336123189|ref|YP_004565237.1| 50S ribosomal protein L18P [Vibrio anguillarum 775]
gi|335340912|gb|AEH32195.1| LSU ribosomal protein L18P [Vibrio anguillarum 775]
Length = 117
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V + R V A + S+ +A A T K I+ ++++ ++ A A+G+ +AERA E
Sbjct: 26 LVVHRTPRHVYAQVIASNGSEVIAAASTVEKAIRELVKNTGNVDAAKAVGKAIAERALEK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V ++ R ++ G++ A+ +S + G+
Sbjct: 86 GVSAVAF-DRSGFQYHGRVAALAESAREAGL 115
>gi|344996409|ref|YP_004798752.1| 50S ribosomal protein L18 [Caldicellulosiruptor lactoaceticus 6A]
gi|343964628|gb|AEM73775.1| ribosomal protein L18 [Caldicellulosiruptor lactoaceticus 6A]
Length = 124
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 63 YKK-EKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 121
YKK + K +H +++ E L V+ S +++ A + + A +
Sbjct: 4 YKKVNRNEKRLIRHKRIRKKVFGTSERPRLCVYKSLKYIYAQIIDDEKGHTLVAASSLEP 63
Query: 122 DIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IK+ L S I A +G+++AERA+E + T R + G+++A+ ++ G+
Sbjct: 64 EIKSRLLSTKSIEAAEYVGKVIAERAKEKGI-TKVVFDRGGYPYHGRVKALAEAARQAGL 122
Query: 182 D 182
+
Sbjct: 123 E 123
>gi|394896027|ref|YP_004699931.2| 50S ribosomal protein L18 [Pseudomonas putida S16]
gi|409427720|ref|ZP_11262213.1| 50S ribosomal protein L18 [Pseudomonas sp. HYS]
gi|429331922|ref|ZP_19212662.1| 50S ribosomal protein L18 [Pseudomonas putida CSV86]
gi|431800523|ref|YP_007227426.1| 50S ribosomal protein L18 [Pseudomonas putida HB3267]
gi|310942015|dbj|BAJ24361.1| 50S ribosomal protein L18 [Pseudomonas putida]
gi|428763433|gb|EKX85608.1| 50S ribosomal protein L18 [Pseudomonas putida CSV86]
gi|430791288|gb|AGA71483.1| 50S ribosomal protein L18 [Pseudomonas putida HB3267]
Length = 116
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T K+++ + +I A +G+++AE
Sbjct: 22 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKELRD--GATGNIDAATKVGKLVAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 80 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 115
>gi|410943554|ref|ZP_11375295.1| 50S ribosomal protein L18 [Gluconobacter frateurii NBRC 101659]
Length = 120
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A T K+++ + +++ A IG+++AER A
Sbjct: 29 LSVFRSSKHIHAQIIDDAQGRTLASASTLEKELRGSGNTGANVDAASVIGKLIAERGLAA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V TA R + G+++A+ ++ + G+
Sbjct: 89 GV-TAVVFDRGAYVYHGRVKALAEAAREGGL 118
>gi|421528316|ref|ZP_15974883.1| 50S ribosomal protein L18 [Pseudomonas putida S11]
gi|338836246|gb|AEJ11051.1| 50S ribosomal protein L18 [Pseudomonas putida S16]
gi|402214273|gb|EJT85603.1| 50S ribosomal protein L18 [Pseudomonas putida S11]
Length = 98
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T K+++ + +I A +G+++AE
Sbjct: 4 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKELRD--GATGNIDAATKVGKLVAE 61
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 62 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 97
>gi|146340073|ref|YP_001205121.1| 50S ribosomal protein L18 [Bradyrhizobium sp. ORS 278]
gi|166218506|sp|A4YSK8.1|RL18_BRASO RecName: Full=50S ribosomal protein L18
gi|146192879|emb|CAL76884.1| 50S ribosomal subunit protein L18 [Bradyrhizobium sp. ORS 278]
Length = 120
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + + A + + +A A + K++++ + +DI A A+G++LAERA +A
Sbjct: 29 LSVFRSSKHIYAQVIDDQKGETIASASSMEKEMRSAGNTGADIDAAKAVGKLLAERAVKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + R + G+++A+ + ++G+
Sbjct: 89 GIKEVVF-DRGGYLYHGRVKALADAARESGL 118
>gi|325272023|ref|ZP_08138467.1| 50S ribosomal protein L18 [Pseudomonas sp. TJI-51]
gi|324102854|gb|EGC00257.1| 50S ribosomal protein L18 [Pseudomonas sp. TJI-51]
Length = 116
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 86 MEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAE 145
+E L VF S + + A + SK +A A T K+++ + +I A +G+++AE
Sbjct: 22 LEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKELRD--GATGNIDAATKVGKLVAE 79
Query: 146 RAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
RA+ A V ++ R K+ G+++A+ + + G++
Sbjct: 80 RAKAAGVSQVAF-DRSGFKYHGRVKALADAAREGGLE 115
>gi|319408749|emb|CBI82406.1| 50S ribosomal protein L18 [Bartonella schoenbuchensis R1]
Length = 120
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V+ S + + A + + +A A T +++ L+S SD A A+G+++AERA++A
Sbjct: 29 LSVYRSNQNIYAQIIDDLRGCTLASACTLEGELRKSLKSGSDKAAAFAVGKLIAERAKKA 88
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
V + R + G+++ + ++ + G+
Sbjct: 89 GVNEVVF-DRGAYVYHGRVKVLAEAAREGGL 118
>gi|254451961|ref|ZP_05065398.1| ribosomal protein L18 [Octadecabacter arcticus 238]
gi|198266367|gb|EDY90637.1| ribosomal protein L18 [Octadecabacter arcticus 238]
Length = 106
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 79 KQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLA 138
K R V P L V S + +S L V +A A + KD+ V ++++ A
Sbjct: 6 KLRKVNAGRP-RLSVHRSNKNISVQLIDDVNGVTLASASSLEKDLGIV--GQNNVEAAAK 62
Query: 139 IGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
+G +AERA++A V A Y R F GK++A+ ++ + G+ +
Sbjct: 63 VGATIAERAKKAGVSEA-YFDRGGFLFHGKVKALAEAAREAGLKI 106
>gi|13470567|ref|NP_102136.1| 50S ribosomal protein L18 [Mesorhizobium loti MAFF303099]
gi|337269065|ref|YP_004613120.1| 50S ribosomal protein L18 [Mesorhizobium opportunistum WSM2075]
gi|73621680|sp|Q98N41.1|RL18_RHILO RecName: Full=50S ribosomal protein L18
gi|14021309|dbj|BAB47922.1| 50S ribosomal protein L18 [Mesorhizobium loti MAFF303099]
gi|336029375|gb|AEH89026.1| ribosomal protein L18 [Mesorhizobium opportunistum WSM2075]
Length = 119
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAV 172
+A A T KD+K L++ +D A AIG+++AERA +A V + R + G+++A+
Sbjct: 50 IAAASTLEKDLKGSLKTGADTAAAAAIGKLIAERATKAGVKEVVF-DRGPYIYHGRVKAL 108
Query: 173 VQSLIDNGI 181
++ + G+
Sbjct: 109 AEAAREGGL 117
>gi|253998031|ref|YP_003050094.1| 50S ribosomal protein L18 [Methylovorus glucosetrophus SIP3-4]
gi|313200097|ref|YP_004038755.1| 50S ribosomal protein L18 [Methylovorus sp. MP688]
gi|253984710|gb|ACT49567.1| ribosomal protein L18 [Methylovorus glucosetrophus SIP3-4]
gi|312439413|gb|ADQ83519.1| ribosomal protein L18 [Methylovorus sp. MP688]
Length = 117
Score = 35.8 bits (81), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 83 VAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRI 142
+A ++ L V S + A + K +A A T +++ +++ ++ A IG+
Sbjct: 18 IAELKVTRLSVHRSNGHIYAQIIAETGDKVLASASTVEVEVRKDIKNGGNVAAAAVIGKR 77
Query: 143 LAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+AE+A+ A + + ++ R K+ G+I+A+ + +NG+
Sbjct: 78 IAEKAKAAGITSVAF-DRSGYKYHGRIKALADAARENGL 115
>gi|59710860|ref|YP_203636.1| 50S ribosomal protein L18 [Vibrio fischeri ES114]
gi|73621726|sp|Q5E898.1|RL18_VIBF1 RecName: Full=50S ribosomal protein L18
gi|59478961|gb|AAW84748.1| 50S ribosomal subunit protein L18 [Vibrio fischeri ES114]
Length = 117
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
S+ +A A T K I+ L S S+ A AIG+++AERA E + ++ R ++ G++
Sbjct: 45 SEVIAAASTVEKAIREQLGSTSNKAAAEAIGKLIAERAIEKGITNVAF-DRSGFQYHGRV 103
Query: 170 RAVVQSLIDNGI 181
A+ +S + G+
Sbjct: 104 AALAESAREAGL 115
>gi|21241753|ref|NP_641335.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78046571|ref|YP_362746.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294627855|ref|ZP_06706434.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664160|ref|ZP_06729546.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325925371|ref|ZP_08186773.1| LSU ribosomal protein L18P [Xanthomonas perforans 91-118]
gi|346723896|ref|YP_004850565.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citrumelo F1]
gi|381171779|ref|ZP_09880919.1| ribosomal protein L18 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|390992804|ref|ZP_10263021.1| ribosomal protein L18 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418522326|ref|ZP_13088363.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|73621734|sp|Q8PNR1.1|RL18_XANAC RecName: Full=50S ribosomal protein L18
gi|115502819|sp|Q3BWW7.1|RL18_XANC5 RecName: Full=50S ribosomal protein L18
gi|21107124|gb|AAM35871.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citri str.
306]
gi|78035001|emb|CAJ22646.1| 50S ribosomal protein L18 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292597769|gb|EFF41927.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292606063|gb|EFF49328.1| 50S ribosomal protein L18 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325544249|gb|EGD15630.1| LSU ribosomal protein L18P [Xanthomonas perforans 91-118]
gi|346648643|gb|AEO41267.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. citrumelo F1]
gi|372552472|emb|CCF69996.1| ribosomal protein L18 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|380687739|emb|CCG37406.1| ribosomal protein L18 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|410701441|gb|EKQ59965.1| 50S ribosomal protein L18 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
Length = 119
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 110 SKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
SK +A A T D+K L++ + A +G+++AERA+ A + ++ R ++ G+I
Sbjct: 47 SKVIAAANTLQADVKDGLKNGKNSDAAAKVGKLIAERAKAAGIEKVAF-DRSGYRYHGRI 105
Query: 170 RAVVQSLIDNGI 181
+A+ + + G+
Sbjct: 106 KALADAAREGGL 117
>gi|153812880|ref|ZP_01965548.1| hypothetical protein RUMOBE_03287 [Ruminococcus obeum ATCC 29174]
gi|149831092|gb|EDM86181.1| ribosomal protein L18 [Ruminococcus obeum ATCC 29174]
Length = 122
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 65 KEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIK 124
+EKK + H++ T P L V+ S + + A + K + A T KD+K
Sbjct: 11 REKKHRRIRHHLNGTATT-----P-RLAVYRSNKHMYAQIIDDTVGKTLVSASTLQKDVK 64
Query: 125 AVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A L + D+ A +G ++ ++A EA + + + R + GK++A+ + + G+
Sbjct: 65 AELENTDDVKAAAYLGTVIGKKAVEAGIESVVF-DRGGYIYHGKVKALADAAREAGL 120
>gi|195582867|ref|XP_002081247.1| GD10917 [Drosophila simulans]
gi|194193256|gb|EDX06832.1| GD10917 [Drosophila simulans]
Length = 189
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 90 TLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERARE 149
TL++ S R+VSA + H + + A T+ IK L +D A + +GR+LA R +
Sbjct: 62 TLEINASGRYVSADVKH-FENGTILSASTSEWAIKQQLYKTNDTSAFINLGRVLAHRCLQ 120
Query: 150 ADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ + T K++ +++++ DNG+
Sbjct: 121 SGI--TEMTCNVEAVPGSKLQKLLKTIQDNGV 150
>gi|117918673|ref|YP_867865.1| 50S ribosomal protein L18 [Shewanella sp. ANA-3]
gi|166218857|sp|A0KRP0.1|RL18_SHESA RecName: Full=50S ribosomal protein L18
gi|117611005|gb|ABK46459.1| LSU ribosomal protein L18P [Shewanella sp. ANA-3]
Length = 116
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKI 169
VA A T K +K L+S ++ A A+G+ +AERA E V T ++ R K+ G++
Sbjct: 47 VAAASTVEKAVKEQLKSTGNVDAAKAVGKFIAERAIEKGVTTVAF-DRSGFKYHGRV 102
>gi|22297640|ref|NP_680887.1| 50S ribosomal protein L18 [Thermosynechococcus elongatus BP-1]
gi|73621716|sp|Q8DML7.1|RL18_THEEB RecName: Full=50S ribosomal protein L18
gi|22293817|dbj|BAC07649.1| 50S ribosomal protein L18 [Thermosynechococcus elongatus BP-1]
Length = 120
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 64 KKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDI 123
K+ + + ++H +++ + L VF S + + A + + A + ++
Sbjct: 2 KQTRTAARQSRHQRIRRKVKGTSDRPRLAVFRSHQHIYAQVIDDTRHHTLVAASSLEPEL 61
Query: 124 KAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ L S A +A+GR++AERA+ A + + R + + G+++A+ + + G+D
Sbjct: 62 RQKLGKGSTCAASIAVGRLIAERAKAAGIERVVF-DRGGNIYHGRVKALADAAREGGLD 119
>gi|336433148|ref|ZP_08612974.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 2_1_58FAA]
gi|336017110|gb|EGN46878.1| 50S ribosomal protein L18 [Lachnospiraceae bacterium 2_1_58FAA]
Length = 107
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L VF S + A + + A T KD+KA L +++ A +G+++AE+A+
Sbjct: 16 LAVFRSNNHMYAQIIDDTVGNTLVAASTLEKDVKAELEKTNNVEAAAYLGKVIAEKAKAK 75
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
+ + R ++GK++A+ + + G++
Sbjct: 76 GITDVVF-DRGGFIYQGKVKALADAAREAGLN 106
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,757,180,942
Number of Sequences: 23463169
Number of extensions: 104397181
Number of successful extensions: 257179
Number of sequences better than 100.0: 820
Number of HSP's better than 100.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 256779
Number of HSP's gapped (non-prelim): 821
length of query: 188
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 54
effective length of database: 9,215,130,721
effective search space: 497617058934
effective search space used: 497617058934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)