BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029749
MFLFLFVLCFYHLFFCCRRSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDS
KILAGRVGAGSGGFSRLVCLRVHPMFTLLHPTKSFISFTSIDGSKQEIWPESGEQFYGGN
LLPNGEWMLVDKCQGLALVNRFNVEEVFKCFIHWGTGTVNLELWSEQRPVSKQSPLAISH
EYEVIKIP

High Scoring Gene Products

Symbol, full name Information P value
HGL1
AT3G23640 		protein from Arabidopsis thaliana 3.1e-65

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029749
        (188 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2088035 - symbol:HGL1 "heteroglycan glucosidas...   668  3.1e-65   1


>TAIR|locus:2088035 [details] [associations]
            symbol:HGL1 "heteroglycan glucosidase 1" species:3702
            "Arabidopsis thaliana" [GO:0004553 "hydrolase activity, hydrolyzing
            O-glycosyl compounds" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0005975 "carbohydrate metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
            InterPro:IPR000322 InterPro:IPR011013 InterPro:IPR013785
            Pfam:PF01055 PROSITE:PS00129 GO:GO:0009507 EMBL:CP002686
            GenomeReviews:BA000014_GR Gene3D:3.20.20.70 InterPro:IPR017853
            SUPFAM:SSF51445 GO:GO:0005975 GO:GO:0004553 GO:GO:0030246 CAZy:GH31
            eggNOG:COG1501 InterPro:IPR025887 PANTHER:PTHR22762 Pfam:PF13802
            SUPFAM:SSF74650 EMBL:AY059821 EMBL:BT002505 EMBL:BT008811
            IPI:IPI00521540 RefSeq:NP_001118685.1 RefSeq:NP_566736.1
            UniGene:At.8054 ProteinModelPortal:Q93Y12 SMR:Q93Y12 PaxDb:Q93Y12
            PRIDE:Q93Y12 EnsemblPlants:AT3G23640.1 EnsemblPlants:AT3G23640.2
            GeneID:821944 KEGG:ath:AT3G23640 TAIR:At3g23640
            HOGENOM:HOG000029407 InParanoid:Q93Y12 OMA:MYQAIPF PhylomeDB:Q93Y12
            ProtClustDB:PLN02763 Genevestigator:Q93Y12 Uniprot:Q93Y12
        Length = 991

 Score = 668 (240.2 bits), Expect = 3.1e-65, P = 3.1e-65
 Identities = 120/170 (70%), Positives = 143/170 (84%)

Query:    19 RSLQHGGEEESLMLEGDIGGGLILQRKLTIPKDNPKIFKIDSKILAGRVGAGSGGFSRLV 78
             R L+H GEEESL+LEGD+GGGL+L+RK++I KDN ++F+I S I A  VGAGSGGFSRLV
Sbjct:   822 RDLEHAGEEESLILEGDVGGGLVLRRKISIAKDNQRVFRIASSIEARSVGAGSGGFSRLV 881

Query:    79 CLRVHPMFTLLHPTKSFISFTSIDGSKQEIWPESGEQFYGGNLLPNGEWMLVDKCQGLAL 138
             CLRVHP FTLLHPT+SF+SFTSIDGSK E+WP+SG+Q Y GN LP+G+WMLVDK   L +
Sbjct:   882 CLRVHPTFTLLHPTESFVSFTSIDGSKHEVWPDSGDQIYEGNNLPHGKWMLVDKSLNLRM 941

Query:   139 VNRFNVEEVFKCFIHWGTGTVNLELWSEQRPVSKQSPLAISHEYEVIKIP 188
             VNRF+V +VFKC IHW  GTVNLELWS++RPVSK+SPL I HEYEV   P
Sbjct:   942 VNRFDVSQVFKCIIHWDCGTVNLELWSKERPVSKESPLKIEHEYEVTSFP 991


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.143   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      188       188   0.00087  110 3  11 22  0.40    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  184 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.65u 0.14s 16.79t   Elapsed:  00:00:01
  Total cpu time:  16.65u 0.14s 16.79t   Elapsed:  00:00:01
  Start:  Thu May  9 16:04:01 2013   End:  Thu May  9 16:04:02 2013

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