BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029750
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp.
japonica GN=Os08g0359500 PE=2 SV=1
Length = 213
Score = 206 bits (524), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/130 (77%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
Query: 1 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDK 60
MSR PEVKWAQR DKV+ITVQL DAK+AKVNLEPEGVFSFSA+AG + +LYE KLEL DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDL 120
VNVEESKI+VGVRSIFCIVEKAE WWKKL+R D K PH+VKVDWDKWVDED+D D+
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDD--GADV 118
Query: 121 DLGGMDFSNF 130
++ GMDFSNF
Sbjct: 119 NVDGMDFSNF 128
>sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica
GN=OsI_027940 PE=1 SV=2
Length = 210
Score = 206 bits (524), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/130 (77%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
Query: 1 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDK 60
MSR PEVKWAQR DKV+ITVQL DAK+AKVNLEPEGVFSFSA+AG + +LYE KLEL DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDL 120
VNVEESKI+VGVRSIFCIVEKAE WWKKL+R D K PH+VKVDWDKWVDED+D D+
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDD--GADV 118
Query: 121 DLGGMDFSNF 130
++ GMDFSNF
Sbjct: 119 NVDGMDFSNF 128
>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana
GN=At3g03773 PE=1 SV=1
Length = 150
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
Query: 1 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDK 60
MSR PEV WAQR DKV++TV LPDAK+ V EP+G+FSFSA GA+ +E LEL+ K
Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSA-LGAQGERFEFSLELYGK 59
Query: 61 VNVEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDED 114
+ E K NVG+R+I ++K E+ WW +LL+ + K Y+KVDW+KW DEDE+
Sbjct: 60 IMTEYRK-NVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112
>sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=wos2 PE=2 SV=1
Length = 186
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 30/170 (17%)
Query: 2 SRVPEVKWAQRQDK-------VFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELK 54
+++PEV WAQR +K +++TV +PDA + K+NL PE + + +GA H Y ++
Sbjct: 5 TQIPEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPEKLV-IDSKSGANAH-YAVQ 62
Query: 55 LELFDKVNVEESKINVGVRSIFCIVEKAE--KGWWKKLLRGDGKTPHYVKVDWDKWVDED 112
++ F ++VE+SK +V R IF ++ K E + +W +L + + H+++ D+D+WVDED
Sbjct: 63 IDFFKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLTKEKLRL-HWLRTDFDRWVDED 121
Query: 113 EDN--------GAGDLD-------LGGMDFSNFGGMGGDDGMGGFEDSDD 147
E GAG + +GGMDFS FG +G G G ED+ D
Sbjct: 122 EQEAQPEVSPFGAGGMPDLSALGGMGGMDFSQFGNLG---GAGAGEDASD 168
>sp|P83868|TEBP_RAT Prostaglandin E synthase 3 OS=Rattus norvegicus GN=Ptges3 PE=1 SV=2
Length = 160
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 7 VKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
KW R+D VFI + D+K+ VN E + +FS G++N + +++LF ++ +S
Sbjct: 6 AKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDS 64
Query: 67 KINVGVRSIFCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGM 125
K RSI C + K E G W +L + K +++ VD++ W D ++D D D+
Sbjct: 65 KHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSN- 119
Query: 126 DFSNFGGMGGDDGMGGFEDSDDEEV 150
F F M D MGG ED D EV
Sbjct: 120 -FDRFSEMM--DHMGGDEDVDLPEV 141
>sp|Q9R0Q7|TEBP_MOUSE Prostaglandin E synthase 3 OS=Mus musculus GN=Ptges3 PE=1 SV=1
Length = 160
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 7 VKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
KW R+D VFI + D+K+ VN E + +FS G++N + +++LF ++ +S
Sbjct: 6 AKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDS 64
Query: 67 KINVGVRSIFCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGM 125
K RSI C + K E G W +L + K +++ VD++ W D ++D D D+
Sbjct: 65 KHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSN- 119
Query: 126 DFSNFGGMGGDDGMGGFEDSDDEEV 150
F F M D MGG ED D EV
Sbjct: 120 -FDRFSEMM--DHMGGDEDVDLPEV 141
>sp|Q5NVM4|TEBP_PONAB Prostaglandin E synthase 3 OS=Pongo abelii GN=PTGES3 PE=2 SV=1
Length = 160
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 7 VKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
KW R+D VFI + D+K+ VN E + +FS G++N + +++LF ++ +S
Sbjct: 6 AKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDS 64
Query: 67 KINVGVRSIFCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGM 125
K RSI C + K E G W +L + K +++ VD++ W D ++D D D+
Sbjct: 65 KHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSN- 119
Query: 126 DFSNFGGMGGDDGMGGFEDSDDEEV 150
F F M MGG ED D EV
Sbjct: 120 -FDRFSEMMN--NMGGDEDVDLPEV 141
>sp|Q6PWL5|TEBP_MACFA Prostaglandin E synthase 3 OS=Macaca fascicularis GN=PTGES3 PE=1
SV=1
Length = 160
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 7 VKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
KW R+D VFI + D+K+ VN E + +FS G++N + +++LF ++ +S
Sbjct: 6 AKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDS 64
Query: 67 KINVGVRSIFCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGM 125
K RSI C + K E G W +L + K +++ VD++ W D ++D D D+
Sbjct: 65 KHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSN- 119
Query: 126 DFSNFGGMGGDDGMGGFEDSDDEEV 150
F F M MGG ED D EV
Sbjct: 120 -FDRFSEMMN--NMGGDEDVDLPEV 141
>sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1
Length = 160
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 7 VKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
KW R+D VFI + D+K+ VN E + +FS G++N + +++LF ++ +S
Sbjct: 6 AKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDS 64
Query: 67 KINVGVRSIFCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGM 125
K RSI C + K E G W +L + K +++ VD++ W D ++D D D+
Sbjct: 65 KHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSN- 119
Query: 126 DFSNFGGMGGDDGMGGFEDSDDEEV 150
F F M MGG ED D EV
Sbjct: 120 -FDRFSEMMN--NMGGDEDVDLPEV 141
>sp|Q3ZBF7|TEBP_BOVIN Prostaglandin E synthase 3 OS=Bos taurus GN=PTGES3 PE=1 SV=1
Length = 160
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 7 VKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
KW R+D VFI + D+K+ VN E + +FS G++N + +++LF ++ +S
Sbjct: 6 AKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDS 64
Query: 67 KINVGVRSIFCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGM 125
K RSI C + K E G W +L + K +++ VD++ W D ++D D D+
Sbjct: 65 KHKRTDRSILCCLRKGESGQSWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSN- 119
Query: 126 DFSNFGGMGGDDGMGGFEDSDDEEV 150
F F M MGG ED D EV
Sbjct: 120 -FDRFSEMMN--NMGGDEDVDLPEV 141
>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SBA1 PE=1 SV=3
Length = 216
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 5 PEVKWAQR-------QDKVFITVQLPDAKNAKVNLEPEGVFSFSAS---AGAEN-HLYEL 53
P+V WAQR ++ V ITV + D ++ ++P + + S G EN H Y+L
Sbjct: 8 PQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKPSYIELKAQSKPHVGDENVHHYQL 67
Query: 54 KLELFDKVNVEES--KINVGVRSIFCIVEK-AEKGWWKKLLRGDGKTPHYVKVDWDKWVD 110
++L+ ++ E++ K+ G + +K E +W +L + K P Y+K D+DKWVD
Sbjct: 68 HIDLYKEIIPEKTMHKVANGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDKWVD 126
Query: 111 EDEDN---GAGDLDLGGMDFS 128
EDE + G+ GMDFS
Sbjct: 127 EDEQDEVEAEGNDAAQGMDFS 147
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSAS-AGAE-NHLYELKLELFDKVN 62
P V WAQR ++++ V+L D +N +++ E V F A GA+ +++YE LE D V
Sbjct: 8 PHVYWAQRHHELYLRVELSDVQNPAISIT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66
Query: 63 VEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDED 112
E + R + V+K E WW++L + + K P ++ D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKESQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSAS-AGAE-NHLYELKLELFDKVN 62
P V WAQR ++++ V+L D KN V++ + V F A GA+ +++YE ++E + V
Sbjct: 8 PHVHWAQRHRELYLRVELSDVKNPDVSIA-DNVLRFRAQGHGAKGDNIYEFQIEFLEPVE 66
Query: 63 VEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDE 113
+ V R + V+K E WW++L + + K P ++ D+D+W+DE +
Sbjct: 67 -PKPVCRVTQRQLNITVQKKESSWWERLTKQE-KRPLFLAPDFDRWLDESD 115
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSAS-AGAE-NHLYELKLELFDKVN 62
P V WAQR ++++ V+L D +N +++ E V F A GA+ +++YE LE D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISIT-ENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66
Query: 63 VEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDED 112
E + R + V+K WW++L + + K P ++ D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q23280|YOCA_CAEEL Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans
GN=ZC395.10 PE=3 SV=1
Length = 175
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 1 MSRVPEVKWAQRQDKVFITVQLPDAKNAKVNLEPEG-VFSFSASAGAENHLYELKLELFD 59
M++ P V WAQR+ V++T+++ +AK + L+ EG F S+ + YE LE FD
Sbjct: 1 MAKQPTVLWAQRESLVYLTIEVDEAKIEE--LKGEGNKLHFQGSSKTDK--YEATLEFFD 56
Query: 60 KVNVEESK-INVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWV 109
+++ K R + V+K WW +LL+ GK H++KVD+ KW
Sbjct: 57 EIDPASVKHTGSSTRVVEITVQKKTPAWWPRLLQNKGKV-HWLKVDFGKWK 106
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSAS-AGAE-NHLYELKLELFDKVN 62
P V WAQR ++++ V+L D +N ++ E V F A GA+ +++YE LE D V
Sbjct: 10 PHVYWAQRHRELYLRVELSDVQNPAIS-TTENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 68
Query: 63 VEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDED 112
E + R + V+K WW++L + + K P ++ D+D+W+DE
Sbjct: 69 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 116
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSAS-AGAE-NHLYELKLELFDKVN 62
P V WAQR ++++ V+L D +N +++ + V F A GA+ +++YE LE D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISIT-DNVLHFKAQGHGAKGDNVYEFHLEFLDLVK 66
Query: 63 VEESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDE 113
E + R + V+K WW++L + + K P ++ D+D+W+DE +
Sbjct: 67 -PEPAYRLTQRQVNITVQKKGSHWWERLTKQE-KRPLFLAPDFDRWLDESD 115
>sp|Q90955|TEBP_CHICK Prostaglandin E synthase 3 (Fragment) OS=Gallus gallus GN=PTGES3
PE=1 SV=1
Length = 146
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 16 VFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVEESKINVGVRSI 75
VFI + D+K+ VN E + +FS G++N + +++LF+ ++ ESK RSI
Sbjct: 1 VFIEFCVEDSKDVNVNFEKSKL-TFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSI 59
Query: 76 FCIVEKAEKGW-WKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDLGGMD-FSN-FGG 132
C + K E G W +L + K +++ VD++ W D ++D D D+ D FS
Sbjct: 60 LCCLRKGESGQAWPRLTKERAKL-NWLSVDFNNWKDWEDD---SDEDMSNFDRFSEMMNN 115
Query: 133 MGGDD 137
MGGDD
Sbjct: 116 MGGDD 120
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 19/118 (16%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSAS---AGAENHLYELKLELFDKV 61
P V WAQR ++++ V++ DA++ + +E E + F A EN YE LE V
Sbjct: 6 PHVYWAQRHGEIYLRVEISDAQDLSIGVE-ENILQFRGQGHGAKGENE-YEFSLEFLKPV 63
Query: 62 NVE------ESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDE 113
E + ++N+ VR K E+ WW +L + + K P ++ D+D+W+DE +
Sbjct: 64 KPEVKHKSTQRQVNITVR-------KQEEVWWNRLTKQEKK-PLFLAPDFDRWLDESD 113
>sp|Q9VH95|YC17_DROME Uncharacterized protein CG16817 OS=Drosophila melanogaster
GN=CG16817 PE=1 SV=1
Length = 184
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFS-ASAGAENHLYELKLELFDKVNV 63
P V WAQR D +++ + + + K+ + + E F+F + + YE+ L +V+
Sbjct: 10 PPVSWAQRNDLIYVIIDV-ECKDIEHKVT-EKTFTFKGVNVLDPSKKYEVTLNFLHEVDP 67
Query: 64 EE-SKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDEDNGAGDLDL 122
E+ + N+G F I +KA +W L K H++K ++ KW DE +D GD
Sbjct: 68 EKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKTKL-HFLKANFAKWRDESDDE-EGDQKD 125
Query: 123 GGMDFSNFGGMGGDDGMGGFED 144
M F NF G D F+D
Sbjct: 126 NSM-FGNFLNSPGGDWNNKFDD 146
>sp|Q9D9A7|PTG3L_MOUSE Putative protein PTGES3L OS=Mus musculus GN=Ptges3l PE=2 SV=1
Length = 131
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 1 MSRVP-EVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFD 59
M R P W R VF+ + D+ + V +E V FS G LY ++E +
Sbjct: 1 MERQPARTLWYDRPKYVFMEFCVEDSTDVSVLIEDHRVV-FSCRNGDGVELYN-EIEFYA 58
Query: 60 KVNVEESKINVGVRSIFCIVEK-AEKGWWKKLLRGDGKTPHYVKVDWDKWVD 110
KVN ++S+ RSI C V K EK W +L + D K P ++ VD+D W D
Sbjct: 59 KVNSKDSQDKRSGRSITCFVRKWKEKVAWPRLTKEDIK-PVWLSVDFDNWRD 109
>sp|Q55ED0|SUGT1_DICDI Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2
SV=1
Length = 387
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 9 WAQRQDKVFITV--QLPDAKNAKVNLEPEGV-FSFSASAGAENHLYELKLELFDKVNVEE 65
W Q + V +T+ + A N+K+NL + V SF + G+E + +++LFD + ++
Sbjct: 200 WYQTETHVVLTIFAKFVTASNSKINLTSKSVNISFPLANGSE---FLFEMDLFDPIVDKD 256
Query: 66 SKINVGVRSIFCIVEKAEKGWWKKLLRGDGK----------------TPHYVKVDWDKWV 109
S I+ + ++K+ W L D +P+ K DWDK
Sbjct: 257 STIHYYSTKVEIKMKKSRAIKWDTLEFTDKSGPVGLMDQISSSPAVPSPYASKKDWDKLP 316
Query: 110 DEDEDNGAGDLDLGGMDFSNFGGMGGDDG----MGGFEDS 145
+E E+ GD L + F + G +D M F +S
Sbjct: 317 NEPEEKLEGDQALNKI-FRDIFSKGSEDQQRAMMKSFTES 355
>sp|Q9CWU0|TDR12_MOUSE Tudor domain-containing protein 12 OS=Mus musculus GN=Tdrd12 PE=2
SV=2
Length = 1215
Score = 38.5 bits (88), Expect = 0.027, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 5 PEVKWAQRQDKVFITVQLPDAKNAKVNLEPEGVFSFSASAGAENHLYELKLELFDKVNVE 64
P++KW Q+ D V + +++ + K+ K + V FSA G + Y LEL + +
Sbjct: 1076 PQIKWFQKDDVVILKIKIRNVKDYKCKFFTDRVI-FSAWVG--DKFYLADLELQGDIRKD 1132
Query: 65 ESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTPHYVKVDWDKWVDEDEDN 115
+ K + + K ++ W LL+ + P+ V D+D W + +ED+
Sbjct: 1133 DCKCIIKDDEPLITLAKEKQECWCGLLK--QRNPN-VAFDFDHWEECEEDS 1180
>sp|Q9Y2Z0|SUGT1_HUMAN Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1
PE=1 SV=3
Length = 365
Score = 33.5 bits (75), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 9 WAQRQDKVFITVQLPDAKNAKVNLE--PEGVFSFSASAGAENHLYELKLELFDKVNVEES 66
W Q + +V IT+ + + + VN+E + + + E+ Y LKLEL + E+S
Sbjct: 176 WYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGED--YNLKLELLHPIIPEQS 233
Query: 67 KINVGVRSIFCIVEKAEKGWWKKLL-RGDGKTP 98
V I ++K E W+KL +GD TP
Sbjct: 234 TFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTP 266
>sp|Q2KIK0|SUGT1_BOVIN Suppressor of G2 allele of SKP1 homolog OS=Bos taurus GN=SUGT1 PE=2
SV=1
Length = 338
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 27/122 (22%)
Query: 9 WAQRQDKVFITVQLPDAKNAKVNLEPEGVFS---FSASAGAEN-HLYELKLELFDKVNVE 64
W Q + +V IT+ + + + VN+E FS SA + Y LKL L + E
Sbjct: 149 WYQTESQVIITLMIKNVQKNDVNVE----FSEKELSALVKLPSGDDYSLKLRLLHPIIPE 204
Query: 65 ESKINVGVRSIFCIVEKAEKGWWKKLLRGDGKTP-----------------HYVKVDWDK 107
+S V I ++K E W+K L G G P HY + +WDK
Sbjct: 205 QSTFKVLSTKIEIKMKKPEAVRWEK-LEGQGDVPNPKPFIADVKNLYPSSSHYTR-NWDK 262
Query: 108 WV 109
V
Sbjct: 263 LV 264
>sp|Q9CX34|SUGT1_MOUSE Suppressor of G2 allele of SKP1 homolog OS=Mus musculus GN=Sugt1
PE=2 SV=3
Length = 336
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 9 WAQRQDKVFITVQLPDAKNAKVNL---EPEGVFSFSASAGAENHLYELKLELFDKVNVEE 65
W Q + V IT+ + + V + E E AG + Y LKL L + E+
Sbjct: 147 WYQTESHVIITLMIKSVQKNDVRVGFSERELSALVKIPAGED---YSLKLRLLHPIIPEQ 203
Query: 66 SKINVGVRSIFCIVEKAEKGWWKKLL-RGDGKTP---------------HYVKVDWDKWV 109
S V I ++K E W+KL +GD TP HY + +WDK V
Sbjct: 204 STFKVLSTKIEIKMKKPEAVRWEKLEGQGDEPTPKQFTADVKNMYPSSSHYTR-NWDKLV 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,030,975
Number of Sequences: 539616
Number of extensions: 4142773
Number of successful extensions: 19663
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 209
Number of HSP's that attempted gapping in prelim test: 18408
Number of HSP's gapped (non-prelim): 1075
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)