BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029752
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O42929|DENR_SCHPO Translation machinery-associated protein 22 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tma22 PE=3 SV=1
Length = 190
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 106/179 (59%)
Query: 5 PQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQ 64
P+ VLYC VC+LP EYCEF L+KCK WL + PD+Y L E + + + +
Sbjct: 7 PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQDLSKDLENTLNVS 66
Query: 65 STGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLS 124
T S+ K + + + K+ +V+I+ + R KRK +TTV+GL+ FG++
Sbjct: 67 GTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGLDAFGIETK 126
Query: 125 DASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGK 183
A+K L KFATGASV K +K++I VQGD++YDI +FI + + +VPE I +ED K
Sbjct: 127 KAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIKIVEDTK 185
>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=TMA22 PE=3 SV=1
Length = 188
Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 109/191 (57%), Gaps = 15/191 (7%)
Query: 1 MAEKPQPV--RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLY-----PDLAEELNS 53
MAE P PV ++YC VC+LP EYCE+G +KC+ WL + PDLY P+ E +
Sbjct: 1 MAE-PTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIWSPEALEAATA 59
Query: 54 READKVGEQLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTV 113
+ E+ A + + KH K K V I+++ RNKRK +T+V
Sbjct: 60 SLSLAAQERAAKDAAKKAAKAEAAEQ--KH-----ADKLAKSVVTIKRIERNKRKFVTSV 112
Query: 114 KGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPE 173
GLE FG++L +K GKKFATGASV K P+ E+I VQGD+S +I EF+ + + D+PE
Sbjct: 113 TGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDIPE 172
Query: 174 TAIFFIEDGKK 184
I +ED KK
Sbjct: 173 DNIELVEDKKK 183
>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tma-22 PE=3 SV=1
Length = 187
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGI 68
V+YC VCSLP EYCE+G ++KC+ WL +N P +Y + + E+ E + + Q +
Sbjct: 9 VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAM 68
Query: 69 SSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASK 128
A KAE + + K+ V I+++ RNKRK +T+V GLE FG++L +K
Sbjct: 69 KDAKKKAAKAEAAEQK---QADKRANSVVTIKRIERNKRKYVTSVSGLEAFGLELKKVAK 125
Query: 129 KLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIED 181
GKKFATG+SV K P+ E+I VQGD+S +I EFI + + +VPE I +ED
Sbjct: 126 DFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVED 178
>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3
SV=2
Length = 201
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 6/181 (3%)
Query: 5 PQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL--AEELNSREADKVGEQ 62
PQ V YC VCSLP EYCE+G ++KC+ WL +N ++Y + E L + A + +
Sbjct: 14 PQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIWSPEALQAATA-ALSVE 72
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
Q A KAE + K+KK V ++++ RNKRK +T+V GLE FG++
Sbjct: 73 AQQRAEKDAKKKAAKAEAAEAKHADKLKKS---VVTVKRIERNKRKYVTSVSGLESFGLE 129
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDG 182
L +K GKKFATG+SV K + E+I VQGD+S +I EFI + + DVPE I ++D
Sbjct: 130 LKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDVPEDNIELVDDK 189
Query: 183 K 183
K
Sbjct: 190 K 190
>sp|Q2TVZ2|DENR_ASPOR Translation machinery-associated protein 22 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tma22 PE=3 SV=1
Length = 194
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 110/184 (59%), Gaps = 11/184 (5%)
Query: 6 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQS 65
Q V+YC VC+LP EYCEFG +KC+ WL + P+LY + L+S EA + L +
Sbjct: 13 QARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKEKQPELY----QRLHSEEA--ISANLST 66
Query: 66 TGISSPASSAPKAEEVKHLPGGK----IKKKDKKEVVIEKVVRNKRKCITTVKGLELFGV 121
IS+ +A A + + ++K +V I++V RNKRK +T + GLE++G+
Sbjct: 67 LSISAQERAAKDAAKKEAKAALAEARDAERKAASKVQIKRVERNKRKHVTVIAGLEVYGL 126
Query: 122 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIE 180
+ +K+LGKKFATG+SV + E+I VQGD+S D+ +++ + + ++PE I IE
Sbjct: 127 ENKKVAKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVYGKEIPEANIEIIE 186
Query: 181 DGKK 184
D KK
Sbjct: 187 DKKK 190
>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tma22 PE=3 SV=1
Length = 194
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 6 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREA--DKVGEQL 63
Q +V+YC VC+LP EYCEFG +KC+ WL N DLY + L S EA + E
Sbjct: 13 QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLY----QRLYSEEALSSNLSELS 68
Query: 64 QSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
S + +A K + ++K +V I++V RNKRK +T + GLE+ G++
Sbjct: 69 VSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKHVTVITGLEVHGLEN 128
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDG 182
+K+LGKKFATG+SV K P E+I VQGD+S D+ E++ + + ++PE+ I +ED
Sbjct: 129 KKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNIELVEDK 188
Query: 183 KK 184
KK
Sbjct: 189 KK 190
>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis
(strain RS) GN=TMA22 PE=3 SV=1
Length = 200
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 4 KPQPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQL 63
+PQ ++YC VCSLP EYCEFG +KC+ WL +N P ++ L E + + L
Sbjct: 15 EPQARHIVYCGVCSLPPEYCEFGGTAKKCEEWLHENNPSMHQKLYSE------ETIAANL 68
Query: 64 QSTGISSPASSAPKAEEVKH----LPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELF 119
+ I + +A A + + + ++K +V I++V RNKRK +T + GLE
Sbjct: 69 STLSIQARERAAKDAAKKEAKAALVETRNQERKAAAKVQIKRVERNKRKHVTVIAGLEAH 128
Query: 120 GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFF 178
G+ +K+LGKKFATG+SV K P E+I VQGD+ D++E++ + +VPE +
Sbjct: 129 GLDNKKVAKELGKKFATGSSVTKNPAGGEEITVQGDVCEDVLEWLVEVHGKEVPEDNLEI 188
Query: 179 IED 181
+ED
Sbjct: 189 VED 191
>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tma22 PE=3 SV=2
Length = 194
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 107/182 (58%), Gaps = 7/182 (3%)
Query: 6 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREA--DKVGEQL 63
Q +V+YC VC+LP EYCEFG +KC+ WL N +LY + L S EA + E
Sbjct: 13 QAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELY----QRLYSEEALSSNLSELS 68
Query: 64 QSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
S + +A K + ++K +V I++V RNKRK +T + GLE+ G++
Sbjct: 69 VSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKHVTVITGLEVHGLEN 128
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDG 182
+K+LGKKFATG+SV K P E+I VQGD+S D+ E++ + + ++PE+ I +ED
Sbjct: 129 KKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNIELVEDK 188
Query: 183 KK 184
KK
Sbjct: 189 KK 190
>sp|A2QHG9|DENR_ASPNC Translation machinery-associated protein 22 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=tma22 PE=3 SV=1
Length = 197
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 18/200 (9%)
Query: 1 MAEKPQPV-------RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNS 53
MAE QPV V+YC VC+LP EYCEFG +KC+ WL D +PD+ + L S
Sbjct: 1 MAEVAQPVPAESQAKHVVYCGVCTLPPEYCEFGGTAKKCEEWL----KDAHPDMYQSLYS 56
Query: 54 READKVGEQLQSTGISS----PASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKC 109
EA + L + +S+ +A K + ++K +V I++V RNKRK
Sbjct: 57 EEA--LNSNLATLSVSARERAAKDAAKKEAKAAAAEARDAERKAASKVQIKRVERNKRKH 114
Query: 110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW- 168
+T + GL+++G++ +K LGKKFATG+S+ + E+I VQGD+S D+ E++ + +
Sbjct: 115 VTVITGLDIYGLENKKIAKDLGKKFATGSSMTRSAGGTEEITVQGDVSDDVKEWLLEVYG 174
Query: 169 PDVPETAIFFIEDGKKVPAV 188
++PE I IED KK A
Sbjct: 175 KEIPEANIELIEDKKKKKAT 194
>sp|Q5ZJ39|DENR_CHICK Density-regulated protein OS=Gallus gallus GN=DENR PE=2 SV=1
Length = 198
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 100/173 (57%), Gaps = 13/173 (7%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N PD + L E + ++ VGE +
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGEGQGTA 87
Query: 67 GISSPASSAPKAEEVKHLPGGKIKKKDK---KEVVIEKVVRNKRKCITTVKGLELFGVKL 123
G + G+IK+K K ++V I K+ R K+K +T V GL F + L
Sbjct: 88 GEEEEKKKQKRGGR------GQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDL 141
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
+A + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 142 KEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 190
>sp|A1C8E3|DENR_ASPCL Translation machinery-associated protein 22 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tma22 PE=3 SV=1
Length = 194
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 18/196 (9%)
Query: 1 MAEKPQPV-------RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNS 53
M E QP +++YC VC+LP EYCEFG +KC+ WL N + Y L E
Sbjct: 1 MGEIAQPAFFESKLKQIVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHEETYQRLYSE--- 57
Query: 54 READKVGEQLQSTGIS----SPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKC 109
+ + L + +S + +A K + ++K +V I++V RNKRK
Sbjct: 58 ---EALSSNLSTLSVSVRERAAKDAAKKEAKAALAEARDAERKAAAKVQIKRVERNKRKH 114
Query: 110 ITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW- 168
+T + GLE+ G++ +K+LGKKFATG+SV K P E+I VQGD+S D+ E++ + +
Sbjct: 115 VTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLEVYG 174
Query: 169 PDVPETAIFFIEDGKK 184
++PE+ I +ED KK
Sbjct: 175 KELPESNIELVEDKKK 190
>sp|A6SIZ0|DENR_BOTFB Translation machinery-associated protein 22 OS=Botryotinia
fuckeliana (strain B05.10) GN=tma22 PE=3 SV=1
Length = 197
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 14/185 (7%)
Query: 6 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEE------LNSREADKV 59
Q V+YC VCSLP EYCE+G ++KC+ WL + P +Y L E ++ D
Sbjct: 14 QSRHVVYCGVCSLPPEYCEYGGTVKKCQEWLEKKYPSMYERLWSEDALAAATSTLSVDAQ 73
Query: 60 GEQLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELF 119
+ + + A +A++ + L KI+ I++V RNKRK +T V+GLE F
Sbjct: 74 KRAAKDATKKAAKAEALEAKQNETLASSKIR--------IKRVERNKRKYVTEVQGLEAF 125
Query: 120 GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFI 179
G++L +K+ G +FATG+SV K + ++I VQGD+S D+ EF+ + ++P+ I
Sbjct: 126 GLELKKVAKEFGSRFATGSSVTKVASGGQEITVQGDVSDDVREFLIKNYKNIPKKNIVLE 185
Query: 180 EDGKK 184
E KK
Sbjct: 186 EPKKK 190
>sp|Q6DFN7|DENR_XENTR Density-regulated protein OS=Xenopus tropicalis GN=denr PE=2 SV=1
Length = 200
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 19/176 (10%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P++VLYC VCSLP EYCE+ PD+ KC+ WL +N PD + L ++ + Q T
Sbjct: 30 PLKVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPDEFSKLTLGISPK---------QET 80
Query: 67 G-ISSPASSAPKAEEVKHLPGGK--IKKKDK---KEVVIEKVVRNKRKCITTVKGLELFG 120
G + A+S + E+ K GG+ IK+K K ++V I K+ R K+K +T V GL F
Sbjct: 81 GTVEGQATSGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFE 140
Query: 121 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
++L DA + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 141 IELKDAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 192
>sp|Q2HJ47|DENR_BOVIN Density-regulated protein OS=Bos taurus GN=DENR PE=2 SV=1
Length = 198
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ + L E + ++ + E +
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTA 87
Query: 67 GISSPASSAPKAEEVKHLPGGKIKKKDK---KEVVIEKVVRNKRKCITTVKGLELFGVKL 123
G + G+IK+K K ++V I K+ R K+K +T V GL F + L
Sbjct: 88 GEEEEKKKQKRGGR------GQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDL 141
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
+A + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 142 KEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 190
>sp|O43583|DENR_HUMAN Density-regulated protein OS=Homo sapiens GN=DENR PE=1 SV=2
Length = 198
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ + L E + ++ + E +
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTA 87
Query: 67 GISSPASSAPKAEEVKHLPGGKIKKKDK---KEVVIEKVVRNKRKCITTVKGLELFGVKL 123
G + G+IK+K K ++V I K+ R K+K +T V GL F + L
Sbjct: 88 GEEEEKKKQKRGGR------GQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDL 141
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
+A + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 142 KEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 190
>sp|Q5RFP5|DENR_PONAB Density-regulated protein OS=Pongo abelii GN=DENR PE=2 SV=1
Length = 198
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ + L E + ++ + E +
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTA 87
Query: 67 GISSPASSAPKAEEVKHLPGGKIKKKDK---KEVVIEKVVRNKRKCITTVKGLELFGVKL 123
G + G+IK+K K ++V I K+ R K+K +T V GL F + L
Sbjct: 88 GEEEEKKKQKRGGR------GQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDL 141
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
+A + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 142 KEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVVDDSI 190
>sp|Q9CQJ6|DENR_MOUSE Density-regulated protein OS=Mus musculus GN=Denr PE=2 SV=1
Length = 198
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P+RVLYC VCSLP EYCE+ PD+ KC+ WL +N P+ + L E + + Q T
Sbjct: 28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPK---------QET 78
Query: 67 GIS---SPASSAPKAEEVKHLPGGKIKKKDK---KEVVIEKVVRNKRKCITTVKGLELFG 120
GI+ P + ++ K G+IK+K K ++V I K+ R K+K +T V GL F
Sbjct: 79 GITEGQGPVGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFE 138
Query: 121 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
+ L +A + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 139 IDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 190
>sp|Q6GLZ1|DENR_XENLA Density-regulated protein OS=Xenopus laevis GN=denr PE=2 SV=1
Length = 198
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 19/176 (10%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P++VLYC VCSLP EYCE+ PD+ KC+ WL +N PD++ L + Q T
Sbjct: 28 PLKVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPDVFAKLTLGHIPK---------QET 78
Query: 67 G-ISSPASSAPKAEEVKHLPGGKIKKKDKKEVV-----IEKVVRNKRKCITTVKGLELFG 120
G + A+S + E+ K GG+ + K KK+ V I K+ R K+K +T V GL F
Sbjct: 79 GTVEGQATSGEEEEKKKQKRGGRGQIKQKKKTVPQRITIAKIPRAKKKYVTRVCGLATFE 138
Query: 121 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
++L DA + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 139 IELKDAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 190
>sp|Q54WG0|DENR_DICDI Density-regulated protein homolog OS=Dictyostelium discoideum
GN=denr PE=3 SV=1
Length = 224
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 115/218 (52%), Gaps = 41/218 (18%)
Query: 6 QPVRVL-YCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQ 64
QP+ V+ YC +CSLP EYCE+GP ++C L +N P +P+ + S +
Sbjct: 11 QPIVVVEYCKICSLPTEYCEYGPSAKQC---LKENGP--HPNNNKNTASGKDSSNTTATT 65
Query: 65 STGISSPASSAPK---------------AEEVKHLPGGKIKKKDKK-------------- 95
+T ++ ++ ++EV H+ GK + K+
Sbjct: 66 TTTDTTTTTTTSTENTEEKLKDLKIVDDSKEVSHVDAGKSESKEATGEEKEKEKVSKKKK 125
Query: 96 ----EVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPT--EKEQ 149
+++IE RNKRK +T + GLEL+G+KLSDA+K + KKF+ G SVVK + E
Sbjct: 126 EVKPQIIIEVNQRNKRKHVTKITGLELYGIKLSDAAKVMAKKFSCGCSVVKSISNPNSED 185
Query: 150 IDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKKVPA 187
ID+QGD ++V+ I + +P VP + I+F+ED KKV A
Sbjct: 186 IDIQGDFGEELVDLIEEKYPTVPLSEIYFLEDKKKVKA 223
>sp|A5DGV3|DENR_PICGU Translation machinery-associated protein 22 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TMA22 PE=3 SV=1
Length = 201
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 10/163 (6%)
Query: 6 QPVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQS 65
+P VLYC VCS P E+CEFG ++CK WL QN +LY L E D + +
Sbjct: 5 EPKSVLYCGVCSFPPEFCEFGGSFKRCKEWLEQNDKELYEKLYSE------DALANATST 58
Query: 66 TGISSPASSAPKAEEVKHLPGGKIKKKDKKE----VVIEKVVRNKRKCITTVKGLELFGV 121
I A + E+ + K +++ KK+ V I+++ RNKRK + + GLE+F +
Sbjct: 59 LSIDKEQKIAKELEKKQAKEEAKQERELKKQLASKVTIKRIERNKRKHVIAISGLEVFDI 118
Query: 122 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+ SK KFATGASV K +K++I VQGD+S + +I
Sbjct: 119 DMKKLSKTFASKFATGASVTKNAEKKDEIIVQGDVSDEARAYI 161
>sp|Q6CA08|DENR_YARLI Translation machinery-associated protein 22 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=TMA22 PE=3 SV=1
Length = 188
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 95/179 (53%), Gaps = 30/179 (16%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P VLYC VC+LP EYCEFG ++CK WL N +L+ +L S EA +
Sbjct: 6 PRTVLYCGVCTLPPEYCEFGGAFKRCKAWLEDNDQELFA----QLYSVEA-------LTN 54
Query: 67 GISSPASSAPKAEEVKHLPGGKIKKKDKKE---------------VVIEKVVRNKRKCIT 111
+ + + SA K EE+ K++K+ +K+ VVI+++ R+KRK I
Sbjct: 55 AVQASSISAEKQEEIDR----KLQKQQQKDEAKAERELLKKLASKVVIKRIERSKRKRII 110
Query: 112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPD 170
+V GLE+F + L SK KFATGASV K KE+I +QGD+ + E IT +
Sbjct: 111 SVSGLEVFELDLKKLSKTFSSKFATGASVTKTADGKEEIVIQGDVGDGVEELITQMLKE 169
>sp|Q6BH22|DENR_DEBHA Translation machinery-associated protein 22 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=TMA22 PE=3 SV=1
Length = 189
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 6/160 (3%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL--AEELNSREADKVGEQLQ 64
P + YC VC+ P EYCEFG ++CK WL +N P+L+ L A+ L + + E+ Q
Sbjct: 6 PKNIEYCEVCTFPPEYCEFGLSFKRCKEWLQENQPELFEKLYSADALANATSTLSLEKEQ 65
Query: 65 STGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLS 124
IS EE K +++KK +V I+++ RNKRK + ++ GLE+F + +
Sbjct: 66 K--ISQEMEKKQAKEEAK--LERELQKKLSSKVTIKRIERNKRKHVISISGLEVFNIDMK 121
Query: 125 DASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+K KFATGASV K +K++I VQGD+S + ++I
Sbjct: 122 KLAKTFASKFATGASVTKNAEKKDEIIVQGDVSDEAKDYI 161
>sp|A3LSY0|DENR_PICST Translation machinery-associated protein 22 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=TMA22 PE=3 SV=1
Length = 195
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 14/161 (8%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGI- 68
V YC VCS P EYCEFG L++CK WL N +L+ + + D + Q + I
Sbjct: 9 VYYCGVCSFPPEYCEFGVSLKRCKDWLQDNNQELFDKIYSD------DALATQTSTLSIE 62
Query: 69 -----SSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
S + EE K +++KK +V+I+++ RN+RK I ++ GLE+F + +
Sbjct: 63 RQEKISQELAKKQLKEEAKQ--ERELQKKLASKVLIKRIERNRRKHIISISGLEVFNIDM 120
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+K KFATGASV K +KE+I VQGD+S + E+I
Sbjct: 121 KKLAKTFASKFATGASVTKTADKKEEILVQGDVSDEAKEYI 161
>sp|Q6DH65|DENR_DANRE Density-regulated protein OS=Danio rerio GN=denr PE=1 SV=1
Length = 208
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 13/179 (7%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL----AEELNSREADKVGEQ 62
P++VLYC VCSLPAEYCE+ P+ KCK WL +N PD++ L A + S+ +
Sbjct: 26 PLKVLYCGVCSLPAEYCEYMPEPAKCKQWLEKNFPDVFAKLTLGTAPKQESKGGGGGEDG 85
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGK--IKKKDK---KEVVIEKVVRNKRKCITTVKGLE 117
G + + E+ K GG+ IK+K K ++V I K+ R K+K +T V GL
Sbjct: 86 GGGRGRGEAPPAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLA 145
Query: 118 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAI 176
F ++L +A + +KF+ GASV T +++I +QGD + DI++ I + WP+V + +I
Sbjct: 146 TFDIELKEAQRFFAQKFSCGASV----TAEDEIIIQGDFTDDIIDVIQEKWPEVDDDSI 200
>sp|A5E3R9|DENR_LODEL Translation machinery-associated protein 22 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=TMA22 PE=3 SV=1
Length = 196
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 15/173 (8%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDL----YPDL----AEELNSREADK 58
P ++ YC VC+ P E+CEFG L +C+ WL P+L YP+ + ++ AD+
Sbjct: 6 PKQITYCGVCTWPLEFCEFGISLPRCQSWLASKHPELFSTVYPNTPNPESVSASAPSADE 65
Query: 59 VGEQLQSTGISS-PASSAPKAEEVKHLPGGKIK------KKDKKEVVIEKVVRNKRKCIT 111
+ +L+ +SS P + +AE +K ++K KK +++I+++ RNKRK I
Sbjct: 66 LASKLELATLSSDPKEAKIQAELLKKQAKHQLKQEKELTKKQNSKIIIKRIERNKRKHII 125
Query: 112 TVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
++ GLE+F ++ +K KFATGASVVK + +++ VQGD+S + E+I
Sbjct: 126 SISGLEVFQIEPKKLAKTFASKFATGASVVKNAEKLDEVVVQGDVSDEAKEYI 178
>sp|Q6CJ30|DENR_KLULA Translation machinery-associated protein 22 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TMA22 PE=3 SV=1
Length = 200
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 16/164 (9%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYP----DLAEELNSREA-----DKVG 60
V+YC VC PAEYCEF ++CK WL +N P+LY D+ E+++ + A D+
Sbjct: 6 VIYCGVCDFPAEYCEFSGKFKRCKAWLQENHPELYTKWYGDVTEDVSKQLAESSIGDERE 65
Query: 61 EQLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFG 120
E+L+ +A E + L KK +VVI + R KRKC+ + GLE+F
Sbjct: 66 EKLEKA--LEKLERKQQAREERELA-----KKLSSKVVIRREARTKRKCMIAISGLEVFE 118
Query: 121 VKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+ + SK KFATG S+ K +KE++ VQGD++ ++ +I
Sbjct: 119 IDMKKLSKTFASKFATGCSISKNAEKKEEVIVQGDLADEVEAYI 162
>sp|P0CR80|DENR_CRYNJ Translation machinery-associated protein 22 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=TMA22 PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 14/163 (8%)
Query: 8 VRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPD------LAEELNSREADKVGE 61
V YCAVCSLP EYCEFGP + KCK WL + D Y LA + + DK E
Sbjct: 13 VHPFYCAVCSLPTEYCEFGPSVSKCKAWLEEQDKDEYERVWGEGALASRIGTLSLDK-QE 71
Query: 62 QLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGV 121
+L++ +A KAE KKK++ +++I++ R KRK T ++ LELFGV
Sbjct: 72 KLEADAAKLEKKAAKKAEAEA-------KKKEQTKIIIKRSERTKRKHQTHIQNLELFGV 124
Query: 122 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
L A+K+ KFATG+SV K P +E+I +QGD+ +IVE I
Sbjct: 125 DLKKAAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMI 167
>sp|P0CR81|DENR_CRYNB Translation machinery-associated protein 22 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=TMA22 PE=3 SV=1
Length = 198
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 14/163 (8%)
Query: 8 VRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPD------LAEELNSREADKVGE 61
V YCAVCSLP EYCEFGP + KCK WL + D Y LA + + DK E
Sbjct: 13 VHPFYCAVCSLPTEYCEFGPSVSKCKAWLEEQDKDEYERVWGEGALASRIGTLSLDK-QE 71
Query: 62 QLQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGV 121
+L++ +A KAE KKK++ +++I++ R KRK T ++ LELFGV
Sbjct: 72 KLEADAAKLEKKAAKKAEAEA-------KKKEQTKIIIKRSERTKRKHQTHIQNLELFGV 124
Query: 122 KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
L A+K+ KFATG+SV K P +E+I +QGD+ +IVE I
Sbjct: 125 DLKKAAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMI 167
>sp|P47089|DENR_YEAST Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA22 PE=1
SV=1
Length = 198
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGI 68
V+YC +CS P EYCEF L++CK WL +N DLY L + N++E + V +L + I
Sbjct: 5 VIYCGICSYPPEYCEFSGKLKRCKVWLSENHADLYAKLYGTDDNTQEVEAVTNKLAESSI 64
Query: 69 SSPASSAPKAEEVK------HLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+ + +K + ++ KK +V+I++ R KRK I + GLE+F +
Sbjct: 65 GEAREEKLEKDLLKIQKKQENREQRELAKKLSSKVIIKREARTKRKFIVAISGLEVFDID 124
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+ +K +FATG SV K +KE++ +QGD+ ++ +I
Sbjct: 125 MKKLAKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEVETYI 166
>sp|A6ZPY2|DENR_YEAS7 Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain YJM789) GN=TMA22 PE=3 SV=1
Length = 198
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGI 68
V+YC +CS P EYCEF L++CK WL +N DLY L + N++E + V +L + I
Sbjct: 5 VIYCGICSYPPEYCEFSGKLKRCKVWLSENHADLYAKLYGTDDNTQEVEAVTNKLAESSI 64
Query: 69 SSPASSAPKAEEVK------HLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+ + +K + ++ KK +V+I++ R KRK I + GLE+F +
Sbjct: 65 GEAREEKLEKDLLKIQKKQENREQRELAKKLSSKVIIKREARTKRKFIVAISGLEVFDID 124
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+ +K +FATG SV K +KE++ +QGD+ ++ +I
Sbjct: 125 MKKLAKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEVETYI 166
>sp|Q75CN1|DENR_ASHGO Translation machinery-associated protein 22 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=TMA22 PE=3 SV=1
Length = 199
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 7/162 (4%)
Query: 9 RVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQL--QST 66
+V+YC VCSLP EYCEF + +CK WL ++ +L+ L + + + D V +L S
Sbjct: 4 KVVYCGVCSLPPEYCEFTGKIRRCKVWLHEHDQELFAQLYGD-DKEDVDGVAARLGQSSI 62
Query: 67 GISSPASSAPKAEEVKHLPGGK----IKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
G K ++++ K + +K VVI + R KRKC+ V GLE+F +
Sbjct: 63 GEEREEQLEKKLQKLQAREESKEQRELARKLSSRVVIRREARTKRKCMVVVAGLEVFEID 122
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+ +K KFATG SV K +KE++ VQGDI+ ++ +I
Sbjct: 123 MKKLAKTFASKFATGCSVSKNVEKKEEVVVQGDIADEVEAYI 164
>sp|A7TES6|DENR_VANPO Translation machinery-associated protein 22 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=TMA22 PE=3
SV=1
Length = 206
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIS 69
V+YC +CS P EYCEF L++CK WL +N +LY L E +L S+ I
Sbjct: 5 VVYCGICSYPPEYCEFSGKLKRCKVWLSENDTELYAKLYGNEIDEEVANAANKLGSSSIG 64
Query: 70 SPASSAPKAEEVK------HLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKL 123
+ + ++ + ++ KK +VVI++ R KRK I + GLE+F + +
Sbjct: 65 EAREEKLEKDLLRLQAKQENREQRELAKKLSSKVVIKREARTKRKFIVAISGLEVFEIDM 124
Query: 124 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+K KFATG SV K +K++I +QGD+ ++ ++I
Sbjct: 125 KKLAKTFASKFATGCSVSKNAEKKDEIVIQGDVLEEVEKYI 165
>sp|Q6FXQ4|DENR_CANGA Translation machinery-associated protein 22 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=TMA22 PE=3 SV=1
Length = 196
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 15/165 (9%)
Query: 10 VLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIS 69
V+YC VC+ P +YCEF L++CK WL +N DLY L E D L +
Sbjct: 5 VVYCGVCTYPIDYCEFSGKLKRCKVWLKENHADLYDKLYSE-----DDAAAASLSAKLAE 59
Query: 70 SPASSAPKAEEVKHLPGGKIKKKDKKE----------VVIEKVVRNKRKCITTVKGLELF 119
S A + + K L + K+++K++ V++++ R KRK I + GLE+F
Sbjct: 60 SSIGEAREEKLEKDLQKLQTKQENKEQRELAKKLSSKVIVKREARTKRKYIVAISGLEVF 119
Query: 120 GVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
+ + +K KFATG SV K +KE++ VQGD+ ++V +I
Sbjct: 120 EIDMKKLAKTFASKFATGCSVSKNAEKKEEVVVQGDVLDEVVAYI 164
>sp|Q9NAH4|DENR_CAEEL Density-regulated protein homolog OS=Caenorhabditis elegans
GN=Y47D3A.21 PE=3 SV=1
Length = 192
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 8/178 (4%)
Query: 7 PVRVLYCAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQST 66
P++++YC CS+P EYC++ + C+ W QN P+L L S E G++ +
Sbjct: 23 PLKMVYCGQCSMPPEYCDYSGQTDVCRAWATQNAPELLEGLE---ISDEPAADGDEKKKQ 79
Query: 67 GISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDA 126
S A GGK K ++V +++ R K K +T +KGL F + L A
Sbjct: 80 KRGGKGSKTGAAAAQAAASGGKKKGGGPQKVTLQREPRGK-KSVTVIKGLATFDIDLKVA 138
Query: 127 SKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 184
SK +KFA G+SV T ++I +QGD+ D+++ I + W V + I + D K+
Sbjct: 139 SKLFAQKFACGSSV----TGADEIVIQGDVKDDLLDLIPEKWKQVTDEQIDDLGDKKR 192
>sp|P56330|SUI1_MAIZE Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3
SV=1
Length = 115
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 68 ISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDAS 127
I P + P AE G KD V I++ RN RK +TTV+GL+ S
Sbjct: 6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQ--RNGRKSLTTVQGLKK-EFSYSKIL 62
Query: 128 KKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K L K+F +VV+ P + I +QGD ++ F+
Sbjct: 63 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFL 99
>sp|Q0D5W6|SUI1_ORYSJ Protein translation factor SUI1 homolog OS=Oryza sativa subsp.
japonica GN=GOS2 PE=3 SV=1
Length = 115
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 68 ISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDAS 127
I P + P AE G KD V I++ RN RK +TTV+GL+ +
Sbjct: 6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQ--RNGRKSLTTVQGLKK-EFSYNKIL 62
Query: 128 KKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K L K+F +VV+ P + I +QGD ++ F+
Sbjct: 63 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFL 99
>sp|A6MZM2|SUI1_ORYSI Protein translation factor SUI1 homolog OS=Oryza sativa subsp.
indica GN=GOS2 PE=2 SV=1
Length = 115
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 68 ISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDAS 127
I P + P AE G KD V I++ RN RK +TTV+GL+ +
Sbjct: 6 IQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQ--RNGRKSLTTVQGLKK-EFSYNKIL 62
Query: 128 KKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K L K+F +VV+ P + I +QGD ++ F+
Sbjct: 63 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFL 99
>sp|P42678|SUI1_ANOGA Protein translation factor SUI1 homolog OS=Anopheles gambiae
GN=AGAP006459 PE=3 SV=1
Length = 110
Score = 37.0 bits (84), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 104 RNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEF 163
RN RK +TTV+GL L + K+FA +V++ P E + +QGD +I ++
Sbjct: 35 RNGRKTLTTVQGLSA-EYDLKKIVRACKKEFACNGTVIEHPEYGEVLQLQGDQRENICQW 93
Query: 164 ITDTWPDVPE 173
+T + PE
Sbjct: 94 LTKSGLAKPE 103
>sp|P32911|SUI1_YEAST Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SUI1 PE=1
SV=1
Length = 108
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 104 RNKRKCITTVKGL-ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVE 162
RN RK +TTV+G+ E + +K K L K FA ++VK P E I +QGD + E
Sbjct: 33 RNGRKTLTTVQGVPEEYDLK--RILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCE 90
Query: 163 FI 164
F+
Sbjct: 91 FM 92
>sp|Q9SM41|SUI1_SPOST Protein translation factor SUI1 homolog OS=Sporobolus stapfianus
PE=3 SV=1
Length = 115
Score = 36.6 bits (83), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 68 ISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDAS 127
I P + P +E G KD V I++ RN RK +TTV+GL+ +
Sbjct: 6 IQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQ--RNGRKSLTTVQGLKK-EFSYNKIL 62
Query: 128 KKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K L K+F +VV+ P + I +QGD ++ F+
Sbjct: 63 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFL 99
>sp|P79060|SUI1_SCHPO Protein translation factor sui1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sui1 PE=3 SV=3
Length = 109
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 104 RNKRKCITTVKGL-ELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVE 162
RN RK +TTV+GL F K + L K FA ++VK E I +QGD ++E
Sbjct: 34 RNGRKTLTTVQGLPREFDQKR--ILRALKKDFACNGTIVKDDDLGEVIQLQGDQRIKVME 91
Query: 163 FIT 165
F+T
Sbjct: 92 FLT 94
>sp|Q9VZS3|SUI1_DROME Protein translation factor SUI1 homolog OS=Drosophila melanogaster
GN=CG17737 PE=1 SV=1
Length = 110
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 104 RNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEF 163
RN RK +TTV+GL L + K+FA +V++ P E + +QGD +I ++
Sbjct: 35 RNGRKTLTTVQGLSA-EYDLKKIVRSCKKEFACNGTVIEHPEYGEVLQLQGDQRENICQW 93
Query: 164 IT 165
+T
Sbjct: 94 LT 95
>sp|Q5RFF4|EIF1_PONAB Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1
PE=3 SV=1
Length = 113
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+Q+ P + A K +++ LP G +D + I++ RN RK +TTV+G+
Sbjct: 4 IQNLHSFDPFADASKGDDL--LPAGT---EDYIHIRIQQ--RNGRKTLTTVQGIAD-DYD 55
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITD 166
K KKFA +V++ P E I +QGD +I +F+ +
Sbjct: 56 KKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVE 99
>sp|P41567|EIF1_HUMAN Eukaryotic translation initiation factor 1 OS=Homo sapiens GN=EIF1
PE=1 SV=1
Length = 113
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+Q+ P + A K +++ LP G +D + I++ RN RK +TTV+G+
Sbjct: 4 IQNLHSFDPFADASKGDDL--LPAGT---EDYIHIRIQQ--RNGRKTLTTVQGIAD-DYD 55
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITD 166
K KKFA +V++ P E I +QGD +I +F+ +
Sbjct: 56 KKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVE 99
>sp|Q5E938|EIF1_BOVIN Eukaryotic translation initiation factor 1 OS=Bos taurus GN=EIF1
PE=3 SV=1
Length = 113
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+Q+ P + A K +++ LP G +D + I++ RN RK +TTV+G+
Sbjct: 4 IQNLHSFDPFADASKGDDL--LPAGT---EDYIHIRIQQ--RNGRKTLTTVQGIAD-DYD 55
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITD 166
K KKFA +V++ P E I +QGD +I +F+ +
Sbjct: 56 KKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVE 99
>sp|P48024|EIF1_MOUSE Eukaryotic translation initiation factor 1 OS=Mus musculus GN=Eif1
PE=2 SV=2
Length = 113
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+Q+ P + A K +++ LP G +D + I++ RN RK +TTV+G+
Sbjct: 4 IQNLHSFDPFADASKGDDL--LPAGT---EDYIHIRIQQ--RNGRKTLTTVQGIAD-DYD 55
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K KKFA +V++ P E I +QGD +I +F+
Sbjct: 56 KKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFL 97
>sp|O48650|SUI1_SALBA Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1
Length = 113
Score = 33.9 bits (76), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 92 KDKKEVVIEKVVRNKRKCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQID 151
KD V +++ RN RK +TTV+GL+ + K L K+F +VV+ P + I
Sbjct: 28 KDYVHVRVQQ--RNGRKSLTTVQGLKK-DYSYNKILKDLKKEFCCNGTVVQDPELGQVIQ 84
Query: 152 VQGDISYDIVEFI 164
+QGD ++ F+
Sbjct: 85 LQGDQRKNVSSFL 97
>sp|Q02785|PDR12_YEAST ATP-dependent permease PDR12 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PDR12 PE=1 SV=1
Length = 1511
Score = 33.9 bits (76), Expect = 0.68, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 14/104 (13%)
Query: 61 EQLQSTGISSPASSAPKAEE----VKHLPGGKIKKKDKK-EVVIEKVVRNKRKCITTVKG 115
+ L + G+ + A+ P EE + +P I K KK +V + +++N C V+
Sbjct: 117 KNLTAVGVDASAAYGPSVEEMFRNIASIPAHLISKFTKKSDVPLRNIIQN---CTGVVES 173
Query: 116 LELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYD 159
E+ V + G +T + G T E +DVQG+ SYD
Sbjct: 174 GEMLFV-----VGRPGAGCSTFLKCLSGETS-ELVDVQGEFSYD 211
>sp|P61220|EIF1B_PIG Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B
PE=3 SV=1
Length = 113
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+Q+ P + A K +++ LP G +D + I++ RN RK +TTV+G+
Sbjct: 4 IQNLQSFDPFADATKGDDL--LPAGT---EDYIHIRIQQ--RNGRKTLTTVQGIAD-DYD 55
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K KKFA +V++ P E I +QGD +I +F+
Sbjct: 56 KKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFL 97
>sp|Q9CXU9|EIF1B_MOUSE Eukaryotic translation initiation factor 1b OS=Mus musculus
GN=Eif1b PE=2 SV=2
Length = 113
Score = 33.9 bits (76), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 63 LQSTGISSPASSAPKAEEVKHLPGGKIKKKDKKEVVIEKVVRNKRKCITTVKGLELFGVK 122
+Q+ P + A K +++ LP G +D + I++ RN RK +TTV+G+
Sbjct: 4 IQNLQSFDPFADATKGDDL--LPAGT---EDYIHIRIQQ--RNGRKTLTTVQGIAD-DYD 55
Query: 123 LSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI 164
K KKFA +V++ P E I +QGD +I +F+
Sbjct: 56 KKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFL 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,675,917
Number of Sequences: 539616
Number of extensions: 3184296
Number of successful extensions: 7761
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 7609
Number of HSP's gapped (non-prelim): 142
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)