Query 029759
Match_columns 188
No_of_seqs 231 out of 1779
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 04:33:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 100.0 1E-28 3.5E-33 172.6 8.4 98 74-183 3-102 (103)
2 1tq1_A AT5G66040, senescence-a 99.9 1.4E-27 4.8E-32 173.0 9.8 112 71-182 16-128 (129)
3 3gk5_A Uncharacterized rhodane 99.9 1.6E-26 5.4E-31 162.6 11.2 100 73-186 4-104 (108)
4 1urh_A 3-mercaptopyruvate sulf 99.9 3.6E-26 1.2E-30 185.2 14.0 164 21-184 65-279 (280)
5 3utn_X Thiosulfate sulfurtrans 99.9 1.3E-25 4.6E-30 185.8 16.2 163 18-180 89-319 (327)
6 3foj_A Uncharacterized protein 99.9 1.3E-26 4.6E-31 160.6 8.7 95 74-181 3-100 (100)
7 3olh_A MST, 3-mercaptopyruvate 99.9 5.5E-26 1.9E-30 186.5 13.4 162 20-181 85-299 (302)
8 3eme_A Rhodanese-like domain p 99.9 1.5E-26 5.2E-31 161.1 8.6 97 74-183 3-102 (103)
9 1rhs_A Sulfur-substituted rhod 99.9 8.5E-26 2.9E-30 184.6 14.4 165 21-185 71-290 (296)
10 3hzu_A Thiosulfate sulfurtrans 99.9 9.7E-26 3.3E-30 186.2 14.2 163 23-186 92-311 (318)
11 1gmx_A GLPE protein; transfera 99.9 6.2E-26 2.1E-30 159.3 10.3 100 73-185 5-106 (108)
12 1e0c_A Rhodanese, sulfurtransf 99.9 7.7E-26 2.6E-30 182.4 11.7 164 20-183 59-271 (271)
13 3hix_A ALR3790 protein; rhodan 99.9 8E-26 2.7E-30 158.4 8.4 97 79-186 2-102 (106)
14 3ilm_A ALR3790 protein; rhodan 99.9 3.2E-25 1.1E-29 163.1 10.2 100 75-185 2-105 (141)
15 3d1p_A Putative thiosulfate su 99.9 6.3E-25 2.2E-29 160.6 11.7 110 73-183 23-138 (139)
16 1uar_A Rhodanese; sulfurtransf 99.9 8E-25 2.7E-29 177.6 13.2 163 23-185 60-284 (285)
17 3aay_A Putative thiosulfate su 99.9 9.2E-25 3.1E-29 176.5 13.0 161 23-184 58-276 (277)
18 1qxn_A SUD, sulfide dehydrogen 99.9 6.9E-25 2.3E-29 160.5 10.5 103 72-186 22-132 (137)
19 2hhg_A Hypothetical protein RP 99.9 6.5E-25 2.2E-29 160.4 10.2 104 72-187 21-137 (139)
20 2wlr_A Putative thiosulfate su 99.9 7.2E-25 2.5E-29 187.3 10.5 161 24-184 58-251 (423)
21 1wv9_A Rhodanese homolog TT165 99.9 5.4E-25 1.8E-29 150.8 6.1 91 74-178 3-94 (94)
22 3flh_A Uncharacterized protein 99.9 1.6E-24 5.5E-29 155.8 8.3 100 73-185 15-121 (124)
23 3nhv_A BH2092 protein; alpha-b 99.9 1.3E-24 4.6E-29 160.2 7.6 101 74-186 17-123 (144)
24 2k0z_A Uncharacterized protein 99.9 6.5E-24 2.2E-28 149.6 8.2 89 86-186 15-105 (110)
25 2fsx_A RV0390, COG0607: rhodan 99.9 5.7E-23 1.9E-27 151.9 10.6 112 72-186 4-142 (148)
26 2wlr_A Putative thiosulfate su 99.9 1.8E-22 6.1E-27 172.5 13.0 162 26-187 187-410 (423)
27 1okg_A Possible 3-mercaptopyru 99.9 5.1E-23 1.8E-27 173.3 9.3 163 21-184 74-295 (373)
28 3tp9_A Beta-lactamase and rhod 99.9 1.1E-22 3.9E-27 175.7 10.9 147 24-183 309-474 (474)
29 2jtq_A Phage shock protein E; 99.9 7.6E-23 2.6E-27 137.5 6.9 75 88-175 2-79 (85)
30 1e0c_A Rhodanese, sulfurtransf 99.9 4.2E-22 1.4E-26 160.4 12.4 115 72-186 8-132 (271)
31 1t3k_A Arath CDC25, dual-speci 99.9 4.4E-23 1.5E-27 153.4 5.6 106 73-186 28-144 (152)
32 3hzu_A Thiosulfate sulfurtrans 99.9 7.8E-22 2.7E-26 162.8 11.5 113 73-185 40-161 (318)
33 3g5j_A Putative ATP/GTP bindin 99.9 2.7E-22 9.4E-27 144.9 7.6 101 74-177 6-130 (134)
34 1urh_A 3-mercaptopyruvate sulf 99.9 1E-21 3.5E-26 158.9 11.1 114 73-186 4-137 (280)
35 1vee_A Proline-rich protein fa 99.9 7.5E-22 2.6E-26 143.6 8.8 107 73-185 5-126 (134)
36 3i2v_A Adenylyltransferase and 99.9 4.2E-22 1.4E-26 142.9 6.2 103 74-180 2-122 (127)
37 3aay_A Putative thiosulfate su 99.8 3.2E-21 1.1E-25 155.8 10.2 113 74-186 7-128 (277)
38 1c25_A CDC25A; hydrolase, cell 99.8 6.7E-21 2.3E-25 142.4 9.6 102 72-184 22-148 (161)
39 1rhs_A Sulfur-substituted rhod 99.8 1.8E-20 6.3E-25 152.9 12.8 113 73-185 8-144 (296)
40 1uar_A Rhodanese; sulfurtransf 99.8 3.5E-21 1.2E-25 156.1 7.9 112 74-185 9-129 (285)
41 1qb0_A Protein (M-phase induce 99.8 2.2E-20 7.6E-25 145.8 11.7 102 72-184 43-170 (211)
42 3olh_A MST, 3-mercaptopyruvate 99.8 2.9E-20 9.8E-25 152.4 12.7 116 70-185 19-159 (302)
43 2a2k_A M-phase inducer phospha 99.8 2.2E-20 7.7E-25 141.4 10.9 102 72-184 23-150 (175)
44 2eg4_A Probable thiosulfate su 99.8 8.4E-21 2.9E-25 149.6 8.6 142 28-183 49-230 (230)
45 2vsw_A Dual specificity protei 99.8 5.2E-21 1.8E-25 141.8 6.6 112 73-184 4-134 (153)
46 1yt8_A Thiosulfate sulfurtrans 99.8 3.9E-20 1.3E-24 162.4 12.2 132 41-185 322-479 (539)
47 2ouc_A Dual specificity protei 99.8 3.4E-20 1.2E-24 135.0 8.1 110 74-185 2-140 (142)
48 1okg_A Possible 3-mercaptopyru 99.8 4.3E-20 1.5E-24 155.5 9.7 111 73-185 14-145 (373)
49 2j6p_A SB(V)-AS(V) reductase; 99.8 8.6E-20 2.9E-24 135.5 9.2 103 73-183 5-122 (152)
50 3op3_A M-phase inducer phospha 99.8 1.2E-19 4.1E-24 142.1 10.4 96 72-178 56-177 (216)
51 4f67_A UPF0176 protein LPG2838 99.8 6.2E-20 2.1E-24 147.6 8.9 101 72-178 121-223 (265)
52 1yt8_A Thiosulfate sulfurtrans 99.8 2E-19 6.7E-24 157.9 10.7 100 73-184 7-111 (539)
53 1hzm_A Dual specificity protei 99.8 5.1E-20 1.8E-24 136.4 4.6 103 73-177 16-142 (154)
54 3ics_A Coenzyme A-disulfide re 99.8 1.9E-19 6.6E-24 159.0 8.4 92 73-177 489-581 (588)
55 3f4a_A Uncharacterized protein 99.8 1.3E-19 4.3E-24 137.0 3.9 105 73-183 31-158 (169)
56 3tg1_B Dual specificity protei 99.8 3.1E-18 1.1E-22 127.7 10.8 106 72-177 10-142 (158)
57 3r2u_A Metallo-beta-lactamase 99.8 3.9E-20 1.3E-24 159.8 0.4 135 23-176 318-465 (466)
58 3ntd_A FAD-dependent pyridine 99.7 6.6E-19 2.3E-23 154.5 4.9 90 75-178 475-565 (565)
59 2eg4_A Probable thiosulfate su 99.7 2.2E-18 7.5E-23 135.7 6.2 92 87-184 6-104 (230)
60 3tp9_A Beta-lactamase and rhod 99.7 1.3E-17 4.3E-22 144.1 6.7 101 72-184 272-373 (474)
61 1whb_A KIAA0055; deubiqutinati 99.7 1.6E-16 5.4E-21 118.4 9.3 110 72-185 14-148 (157)
62 2gwf_A Ubiquitin carboxyl-term 99.7 1.7E-16 5.8E-21 118.3 8.8 110 73-185 20-153 (157)
63 3utn_X Thiosulfate sulfurtrans 99.7 4.9E-16 1.7E-20 128.5 11.8 112 73-185 28-162 (327)
64 3r2u_A Metallo-beta-lactamase 99.4 5.7E-13 2E-17 114.9 8.5 78 86-175 295-375 (466)
65 2f46_A Hypothetical protein; s 98.2 6.6E-06 2.3E-10 60.4 8.1 84 75-163 30-129 (156)
66 4erc_A Dual specificity protei 93.9 0.32 1.1E-05 34.1 8.1 84 76-163 24-117 (150)
67 1xri_A AT1G05000; structural g 92.5 0.35 1.2E-05 34.2 6.4 86 77-163 23-120 (151)
68 2img_A Dual specificity protei 91.7 0.83 2.9E-05 31.8 7.6 84 76-163 25-118 (151)
69 1ywf_A Phosphotyrosine protein 91.4 1.5 5.1E-05 35.0 9.6 100 64-163 45-201 (296)
70 1v8c_A MOAD related protein; r 91.3 0.025 8.6E-07 41.9 -0.9 21 89-113 123-143 (168)
71 2nt2_A Protein phosphatase sli 88.8 0.69 2.4E-05 32.4 5.0 80 81-163 23-110 (145)
72 2hcm_A Dual specificity protei 88.2 0.74 2.5E-05 33.0 5.0 74 85-163 35-118 (164)
73 1fpz_A Cyclin-dependent kinase 87.8 1.7 5.7E-05 32.6 6.9 83 77-163 61-163 (212)
74 1yz4_A DUSP15, dual specificit 87.0 1.2 4.1E-05 31.7 5.5 76 85-163 31-113 (160)
75 3s4o_A Protein tyrosine phosph 86.9 5.9 0.0002 27.8 9.2 88 71-163 30-138 (167)
76 3ezz_A Dual specificity protei 86.8 2.3 7.9E-05 29.5 6.8 78 85-163 27-110 (144)
77 3rz2_A Protein tyrosine phosph 86.3 5.2 0.00018 29.2 8.8 85 74-163 47-145 (189)
78 1wrm_A Dual specificity phosph 86.0 1.5 5.1E-05 31.5 5.6 78 85-163 30-112 (165)
79 2r0b_A Serine/threonine/tyrosi 85.5 2.7 9.4E-05 29.4 6.7 84 80-163 26-119 (154)
80 2esb_A Dual specificity protei 84.9 2.5 8.5E-05 31.1 6.4 77 85-163 43-126 (188)
81 3rgo_A Protein-tyrosine phosph 84.9 1.2 4E-05 31.4 4.4 81 79-163 19-118 (157)
82 2wgp_A Dual specificity protei 83.1 2.5 8.4E-05 31.2 5.7 77 85-163 49-132 (190)
83 2e0t_A Dual specificity phosph 82.1 1.5 5E-05 30.8 3.9 28 136-163 84-114 (151)
84 1zzw_A Dual specificity protei 81.3 2.2 7.5E-05 29.8 4.7 29 135-163 81-112 (149)
85 3s4e_A Dual specificity protei 81.0 4.7 0.00016 27.9 6.3 74 85-163 27-110 (144)
86 3f81_A Dual specificity protei 80.8 3.2 0.00011 30.1 5.6 27 137-163 115-144 (183)
87 2jgn_A DBX, DDX3, ATP-dependen 79.3 3.8 0.00013 29.9 5.5 46 127-172 36-81 (185)
88 2g6z_A Dual specificity protei 77.1 4.6 0.00016 30.5 5.5 29 135-163 81-112 (211)
89 2pq5_A Dual specificity protei 76.1 16 0.00056 27.0 8.4 28 136-163 130-160 (205)
90 1rxd_A Protein tyrosine phosph 75.1 18 0.0006 25.0 9.1 89 70-163 22-124 (159)
91 2y96_A Dual specificity phosph 73.1 27 0.00092 26.2 9.1 29 135-163 137-168 (219)
92 1yn9_A BVP, polynucleotide 5'- 71.7 24 0.00081 24.9 8.5 84 75-163 44-142 (169)
93 2q05_A Late protein H1, dual s 70.9 12 0.00041 27.5 6.5 75 88-163 75-154 (195)
94 1jzt_A Hypothetical 27.5 kDa p 70.0 19 0.00064 27.8 7.6 32 138-169 59-94 (246)
95 2rb4_A ATP-dependent RNA helic 68.0 8.9 0.0003 27.3 5.1 36 136-171 33-68 (175)
96 1t5i_A C_terminal domain of A 67.6 10 0.00034 27.1 5.3 45 127-172 22-66 (172)
97 1ohe_A CDC14B, CDC14B2 phospha 65.9 49 0.0017 26.8 9.6 82 77-163 207-298 (348)
98 2hjv_A ATP-dependent RNA helic 65.3 7.3 0.00025 27.5 4.1 37 136-172 34-70 (163)
99 1fuk_A Eukaryotic initiation f 63.6 13 0.00044 26.1 5.2 46 126-172 20-65 (165)
100 2c46_A MRNA capping enzyme; ph 61.2 48 0.0016 25.3 8.3 85 75-163 67-170 (241)
101 3d3j_A Enhancer of mRNA-decapp 61.0 11 0.00037 30.2 4.7 32 138-169 133-168 (306)
102 3cm3_A Late protein H1, dual s 60.7 20 0.00068 25.6 5.8 28 136-163 107-137 (176)
103 3d3k_A Enhancer of mRNA-decapp 60.0 11 0.00037 29.4 4.4 31 138-168 86-120 (259)
104 2p6n_A ATP-dependent RNA helic 59.3 12 0.00041 27.3 4.4 36 137-172 54-89 (191)
105 2i6j_A Ssoptp, sulfolobus solf 57.7 43 0.0015 23.0 8.1 82 77-163 18-118 (161)
106 2i4i_A ATP-dependent RNA helic 57.3 18 0.00063 29.0 5.6 47 126-172 265-311 (417)
107 2v1x_A ATP-dependent DNA helic 57.1 16 0.00056 31.8 5.5 36 136-171 266-301 (591)
108 2o8n_A APOA-I binding protein; 56.3 14 0.00048 28.9 4.5 32 138-169 80-115 (265)
109 4a29_A Engineered retro-aldol 53.8 27 0.00091 27.3 5.7 90 75-167 137-232 (258)
110 3czc_A RMPB; alpha/beta sandwi 51.8 15 0.00051 24.4 3.5 26 138-163 19-49 (110)
111 3rss_A Putative uncharacterize 51.6 29 0.001 29.7 6.1 47 136-182 51-110 (502)
112 3v0d_A Voltage-sensor containi 51.0 32 0.0011 27.9 6.0 84 75-162 50-146 (339)
113 3nbm_A PTS system, lactose-spe 50.0 13 0.00045 24.9 3.0 29 135-163 4-36 (108)
114 3eaq_A Heat resistant RNA depe 48.7 15 0.00052 27.1 3.5 37 136-172 30-66 (212)
115 3hh1_A Tetrapyrrole methylase 47.2 44 0.0015 22.2 5.4 92 72-169 18-116 (117)
116 2hxp_A Dual specificity protei 46.6 21 0.00072 24.9 3.8 29 135-163 83-114 (155)
117 3gxh_A Putative phosphatase (D 45.2 75 0.0026 22.1 9.7 83 75-163 28-124 (157)
118 1e2b_A Enzyme IIB-cellobiose; 42.9 13 0.00045 24.7 2.1 26 138-163 4-33 (106)
119 3to5_A CHEY homolog; alpha(5)b 42.3 49 0.0017 22.6 5.1 40 135-174 10-50 (134)
120 2l2q_A PTS system, cellobiose- 42.1 9.5 0.00033 25.4 1.3 27 137-163 4-34 (109)
121 1oyw_A RECQ helicase, ATP-depe 41.7 24 0.00083 30.1 4.1 37 136-172 235-271 (523)
122 3i32_A Heat resistant RNA depe 41.4 31 0.0011 27.2 4.5 36 137-172 28-63 (300)
123 2oud_A Dual specificity protei 41.3 31 0.0011 24.6 4.1 29 135-163 85-116 (177)
124 1xti_A Probable ATP-dependent 41.2 42 0.0014 26.5 5.3 36 136-171 249-284 (391)
125 3kwp_A Predicted methyltransfe 40.5 92 0.0032 24.5 7.1 91 72-169 28-125 (296)
126 1tvm_A PTS system, galactitol- 40.2 20 0.00069 24.0 2.7 26 138-163 22-52 (113)
127 1vkr_A Mannitol-specific PTS s 40.1 21 0.00073 24.4 2.9 26 137-162 13-43 (125)
128 3nme_A Ptpkis1 protein, SEX4 g 39.9 29 0.001 27.3 4.1 24 76-99 28-52 (294)
129 4fak_A Ribosomal RNA large sub 39.1 45 0.0016 24.1 4.6 46 128-173 65-116 (163)
130 3emu_A Leucine rich repeat and 38.4 46 0.0016 23.4 4.6 29 135-163 85-116 (161)
131 3fwz_A Inner membrane protein 34.6 50 0.0017 22.3 4.2 29 140-168 9-37 (140)
132 3tsm_A IGPS, indole-3-glycerol 34.4 74 0.0025 24.9 5.5 86 75-167 153-248 (272)
133 1hv8_A Putative ATP-dependent 32.7 46 0.0016 25.8 4.2 48 125-172 225-273 (367)
134 1wp9_A ATP-dependent RNA helic 32.5 75 0.0026 25.4 5.6 35 135-169 359-393 (494)
135 2yjt_D ATP-dependent RNA helic 38.4 9.6 0.00033 27.0 0.0 37 136-172 29-65 (170)
136 1to0_A Hypothetical UPF0247 pr 32.0 67 0.0023 23.2 4.6 47 128-174 61-113 (167)
137 1c4o_A DNA nucleotide excision 30.7 54 0.0018 28.9 4.6 38 134-171 436-473 (664)
138 2d7d_A Uvrabc system protein B 30.4 81 0.0028 27.8 5.7 38 134-171 442-479 (661)
139 3fht_A ATP-dependent RNA helic 30.0 50 0.0017 26.2 4.0 36 136-171 265-300 (412)
140 2j16_A SDP-1, tyrosine-protein 29.4 76 0.0026 22.9 4.6 29 135-163 115-146 (182)
141 4h3k_B RNA polymerase II subun 29.2 64 0.0022 24.4 4.1 28 138-165 26-54 (214)
142 1s2m_A Putative ATP-dependent 29.2 43 0.0015 26.6 3.5 37 136-172 257-293 (400)
143 1id1_A Putative potassium chan 29.1 68 0.0023 21.8 4.2 28 141-168 6-33 (153)
144 3pey_A ATP-dependent RNA helic 29.1 55 0.0019 25.7 4.1 36 136-171 242-277 (395)
145 1k92_A Argininosuccinate synth 28.4 68 0.0023 27.1 4.6 32 134-165 7-38 (455)
146 4ea9_A Perosamine N-acetyltran 27.9 98 0.0033 22.6 5.1 45 137-182 12-57 (220)
147 2j0s_A ATP-dependent RNA helic 27.9 57 0.002 26.0 4.0 36 137-172 276-311 (410)
148 3n0a_A Tyrosine-protein phosph 27.5 2.5E+02 0.0085 22.8 8.6 80 78-162 50-142 (361)
149 3i5x_A ATP-dependent RNA helic 26.8 77 0.0026 26.7 4.8 37 135-171 337-376 (563)
150 3llv_A Exopolyphosphatase-rela 25.8 87 0.003 20.8 4.2 28 141-168 9-36 (141)
151 2db3_A ATP-dependent RNA helic 25.2 1.1E+02 0.0036 25.1 5.2 33 139-171 302-334 (434)
152 3sqw_A ATP-dependent RNA helic 25.2 84 0.0029 26.8 4.8 37 135-171 286-325 (579)
153 1s4d_A Uroporphyrin-III C-meth 24.9 2.4E+02 0.0081 21.7 7.9 109 72-182 27-144 (280)
154 2fca_A TRNA (guanine-N(7)-)-me 24.5 1.3E+02 0.0045 21.7 5.2 45 123-167 132-176 (213)
155 3eiq_A Eukaryotic initiation f 24.2 89 0.003 24.8 4.5 46 126-172 270-315 (414)
156 3fpn_A Geobacillus stearotherm 24.2 1.4E+02 0.0049 20.1 4.9 49 124-172 6-58 (119)
157 4b2v_A S64; toxin, ICK; NMR {S 24.1 24 0.00083 17.6 0.6 13 21-33 7-20 (32)
158 3jux_A Protein translocase sub 24.0 82 0.0028 28.8 4.5 37 136-172 473-509 (822)
159 3ndc_A Precorrin-4 C(11)-methy 23.7 2.4E+02 0.0083 21.4 7.7 92 72-169 16-112 (264)
160 3p9y_A CG14216, LD40846P; phos 23.5 95 0.0033 23.1 4.1 28 137-164 9-37 (198)
161 2ybo_A Methyltransferase; SUMT 23.4 2.5E+02 0.0084 21.8 6.9 109 72-182 37-154 (294)
162 1o6d_A Hypothetical UPF0247 pr 22.1 76 0.0026 22.9 3.3 47 128-175 56-108 (163)
163 3ipz_A Monothiol glutaredoxin- 22.1 1.3E+02 0.0046 19.3 4.4 28 136-163 16-49 (109)
164 1tf5_A Preprotein translocase 21.9 79 0.0027 29.0 4.0 37 136-172 431-467 (844)
165 3ohg_A Uncharacterized protein 21.6 87 0.003 24.7 3.8 26 147-172 218-244 (285)
166 1wyz_A Putative S-adenosylmeth 21.1 1.4E+02 0.0049 22.3 4.9 94 75-169 21-120 (242)
167 2hma_A Probable tRNA (5-methyl 21.0 91 0.0031 25.4 4.0 29 137-165 9-37 (376)
168 4ao9_A Beta-phenylalanine amin 20.8 1E+02 0.0035 25.8 4.3 52 125-176 130-184 (454)
169 2fsf_A Preprotein translocase 20.8 98 0.0034 28.5 4.4 38 135-172 439-476 (853)
170 2der_A TRNA-specific 2-thiouri 20.7 61 0.0021 26.6 2.8 30 136-165 16-45 (380)
171 1d5r_A Phosphoinositide phosph 20.3 2.1E+02 0.0071 22.6 5.9 81 76-160 43-136 (324)
172 3o8b_A HCV NS3 protease/helica 20.2 83 0.0028 28.0 3.8 38 136-173 395-432 (666)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.95 E-value=1e-28 Score=172.58 Aligned_cols=98 Identities=20% Similarity=0.201 Sum_probs=88.9
Q ss_pred ccCHHHHHHHHhCC--CEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHH
Q 029759 74 SVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 74 ~i~~~~~~~~l~~~--~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~ 151 (188)
.|+++++++++.++ ++|||||+++||..||||||+|+|+. .+...+..++++++||+||.+|.||.
T Consensus 3 ~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivv~C~~G~rS~ 70 (103)
T 3iwh_A 3 SITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRSA 70 (103)
T ss_dssp EECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHHH
T ss_pred CcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCccc------------chhhhhhhhcCCCeEEEECCCCHHHH
Confidence 58999999988654 89999999999999999999999984 44555666889999999999999999
Q ss_pred HHHHHHHHCCCCceEecCcHHhhhhCCCcccc
Q 029759 152 MAATDLLNAVSTHANYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 152 ~a~~~L~~~G~~~v~l~GG~~~W~~~g~p~~~ 183 (188)
.++..|+..||+++++.||+.+|..+|+|+++
T Consensus 71 ~aa~~L~~~G~~~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 71 KVVEYLEANGIDAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHTTTCEEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHcCCCEEEecChHHHHHHCCCccee
Confidence 99999999999988999999999999999985
No 2
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.95 E-value=1.4e-27 Score=173.01 Aligned_cols=112 Identities=59% Similarity=0.859 Sum_probs=99.9
Q ss_pred CCcccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHH
Q 029759 71 VPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (188)
Q Consensus 71 ~~~~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a 150 (188)
....|+++++.++++++++|||||+++||..||||||+|+|+......+.+.+.+++++....++++++||+||.+|.+|
T Consensus 16 ~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G~rs 95 (129)
T 1tq1_A 16 VPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGGRS 95 (129)
T ss_dssp CCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSCSHH
T ss_pred CCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCCcHH
Confidence 34479999999998867999999999999999999999999865555666667788888877788899999999999999
Q ss_pred HHHHHHHHHCCCCce-EecCcHHhhhhCCCccc
Q 029759 151 MMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLT 182 (188)
Q Consensus 151 ~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~ 182 (188)
..+++.|..+||+++ +|.|||.+|..+|+|++
T Consensus 96 ~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 96 IKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp HHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred HHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 999999999999988 79999999999999986
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.94 E-value=1.6e-26 Score=162.59 Aligned_cols=100 Identities=23% Similarity=0.247 Sum_probs=91.0
Q ss_pred cccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHH
Q 029759 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMM 152 (188)
Q Consensus 73 ~~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~ 152 (188)
..|+++++.+++++ ++|||+|+++||..||||||+|+|+ +.+...+..++++++||+||.+|.+|..
T Consensus 4 ~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyC~~G~rs~~ 70 (108)
T 3gk5_A 4 RSINAADLYENIKA-YTVLDVREPFELIFGSIANSINIPI------------SELREKWKILERDKKYAVICAHGNRSAA 70 (108)
T ss_dssp CEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTCEECCH------------HHHHHHGGGSCTTSCEEEECSSSHHHHH
T ss_pred cEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCCEEcCH------------HHHHHHHHhCCCCCeEEEEcCCCcHHHH
Confidence 36899999999888 9999999999999999999999998 4677777788899999999999999999
Q ss_pred HHHHHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 153 AATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 153 a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
+++.|+.+|| ++ +|.||+.+|..+++|+++...
T Consensus 71 aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~ 104 (108)
T 3gk5_A 71 AVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH 104 (108)
T ss_dssp HHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred HHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence 9999999999 88 799999999999999988654
No 4
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.94 E-value=3.6e-26 Score=185.19 Aligned_cols=164 Identities=20% Similarity=0.206 Sum_probs=125.4
Q ss_pred CccCCCchhh-hhcccccccCCceeEEeecCCCcc-----------cccccccccccc---cccCCC-------------
Q 029759 21 PVLCPHGNNR-RGLLSLTVDQQRCDNIGFISSKIL-----------SFCPKASLRGNL---EAVGVP------------- 72 (188)
Q Consensus 21 ~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~---~~~~~~------------- 72 (188)
+.+.|+.+.| +++..+|++..+.+|+|+..+... ++.++..++|++ ...+.+
T Consensus 65 ~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~ 144 (280)
T 1urh_A 65 PHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEF 144 (280)
T ss_dssp SSCCCCHHHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCCCCCCCCC
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCCCCCCCcc
Confidence 4566777888 777777888899999998776541 677777777765 111211
Q ss_pred -------cccCHHHHHHHHhC-CCEEEecCChhhH-----------hcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc
Q 029759 73 -------TSVPVRVAHELLQA-GHRYLDVRTPEEF-----------SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR 133 (188)
Q Consensus 73 -------~~i~~~~~~~~l~~-~~~iIDvR~~~ef-----------~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~ 133 (188)
..++++++.+++++ +.+|||+|+++|| ..||||||+|+|+.+...++.+.+.+.+.+.+..
T Consensus 145 ~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~~~~~~~~~l~~~~~~ 224 (280)
T 1urh_A 145 NAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFG 224 (280)
T ss_dssp CCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSSSSBCCHHHHHHHHHT
T ss_pred ccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcCCccCCHHHHHHHHHH
Confidence 12899999998864 5999999999999 6899999999999776666778888888887764
Q ss_pred --cCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhhC-CCccccc
Q 029759 134 --FRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLS-NQLLTEE 184 (188)
Q Consensus 134 --l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~-g~p~~~~ 184 (188)
++++++||+||++|.+|+.++..|+.+||+++ +|.|||.+|... ++|+++.
T Consensus 225 ~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~ 279 (280)
T 1urh_A 225 RGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV 279 (280)
T ss_dssp TTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC------------
T ss_pred cCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCceec
Confidence 67899999999999999999999999999988 799999999885 9999763
No 5
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-25 Score=185.76 Aligned_cols=163 Identities=17% Similarity=0.179 Sum_probs=126.5
Q ss_pred CCCCccCCCchhh-hhcccccccCCceeEEeecCCCcc-----------cccccccccccc--cccCCC-----------
Q 029759 18 SLPPVLCPHGNNR-RGLLSLTVDQQRCDNIGFISSKIL-----------SFCPKASLRGNL--EAVGVP----------- 72 (188)
Q Consensus 18 ~~~~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~----------- 72 (188)
+-.|.+.|+.+.| +.+..+|+++++.||+||.....+ |+.++..++|+. ...+.+
T Consensus 89 ~~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg~aW~~~g~p~~~~~~~~~~p 168 (327)
T 3utn_X 89 SPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNFNQYREFKYPLDSSKVAAFSP 168 (327)
T ss_dssp SSSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCHHHHHHTTCCCBCCCCSCSCS
T ss_pred CCCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccHHHHHHhCCCcccCCccCcCC
Confidence 4467788999999 999999999999999999877654 888888887642 011110
Q ss_pred ---------------cccCHHHHHHHHhCC-----CEEEecCChhhHh-----------cCCCCCeEEcCcccccC-CCC
Q 029759 73 ---------------TSVPVRVAHELLQAG-----HRYLDVRTPEEFS-----------AGHATGAINVPYMYRVG-SGM 120 (188)
Q Consensus 73 ---------------~~i~~~~~~~~l~~~-----~~iIDvR~~~ef~-----------~ghIpgAinip~~~~~~-~~~ 120 (188)
..++.+++.+.++++ .+|||+|+++||. .||||||+|+|+.+.++ ++.
T Consensus 169 ~p~~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~ 248 (327)
T 3utn_X 169 YPKSHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETK 248 (327)
T ss_dssp SCCCCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTC
T ss_pred cCCcccccccccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCC
Confidence 026777888877653 7899999999996 59999999999988775 333
Q ss_pred -CCC-HHHHH----HHHh----ccCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCc
Q 029759 121 -TKN-LKFVE----EVST----RFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQL 180 (188)
Q Consensus 121 -~~~-~~~l~----~~~~----~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p 180 (188)
+.. .+.+. +.+. .++++++||+||++|++|+.++..|+.+||+++ +|+|+|.+|.....|
T Consensus 249 ~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 249 TYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp CCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 222 23333 3222 367889999999999999999999999999988 899999999876444
No 6
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.94 E-value=1.3e-26 Score=160.61 Aligned_cols=95 Identities=21% Similarity=0.197 Sum_probs=85.2
Q ss_pred ccCHHHHHHHHh--CCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHH
Q 029759 74 SVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 74 ~i~~~~~~~~l~--~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~ 151 (188)
.|+++++.++++ ++++|||+|+++||..||||||+|+|+. .+......++++++||+||.+|.+|.
T Consensus 3 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivvyC~~g~rs~ 70 (100)
T 3foj_A 3 SITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMN------------SIPDNLNYFNDNETYYIICKAGGRSA 70 (100)
T ss_dssp EECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGSCTTSEEEEECSSSHHHH
T ss_pred ccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhCCCCCcEEEEcCCCchHH
Confidence 588999999884 3499999999999999999999999984 44455566788999999999999999
Q ss_pred HHHHHHHHCCCCce-EecCcHHhhhhCCCcc
Q 029759 152 MAATDLLNAVSTHA-NYPSKPLTWFLSNQLL 181 (188)
Q Consensus 152 ~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~ 181 (188)
.+++.|+..|| ++ +|.||+.+|..+|+|+
T Consensus 71 ~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 71 QVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 99999999999 78 7999999999999986
No 7
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.93 E-value=5.5e-26 Score=186.45 Aligned_cols=162 Identities=17% Similarity=0.211 Sum_probs=132.2
Q ss_pred CCccCCCchhh-hhcccccccCCceeEEeecC--CCc-----------ccccccccccccc---cccCCC----------
Q 029759 20 PPVLCPHGNNR-RGLLSLTVDQQRCDNIGFIS--SKI-----------LSFCPKASLRGNL---EAVGVP---------- 72 (188)
Q Consensus 20 ~~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~~--~~~-----------~~~~~~~~~~~~~---~~~~~~---------- 72 (188)
.+...|+.+.| +++..++++.++.+|+|+.. ... +++.++..++|++ ...+.+
T Consensus 85 ~~~~lp~~~~~~~~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~ 164 (302)
T 3olh_A 85 YDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKSQPAP 164 (302)
T ss_dssp SSSCCCCHHHHHHHHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCCCCCC
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCCCcCc
Confidence 45566888899 88888899999999999853 222 2777777777765 111111
Q ss_pred ----------cccCHHHHHHHHhC-CCEEEecCChhhH-----------hcCCCCCeEEcCcccccC-CCCCCCHHHHHH
Q 029759 73 ----------TSVPVRVAHELLQA-GHRYLDVRTPEEF-----------SAGHATGAINVPYMYRVG-SGMTKNLKFVEE 129 (188)
Q Consensus 73 ----------~~i~~~~~~~~l~~-~~~iIDvR~~~ef-----------~~ghIpgAinip~~~~~~-~~~~~~~~~l~~ 129 (188)
..++.+++.+++++ +++|||+|+++|| ..||||||+|+|+.+... .+.+++.+.+++
T Consensus 165 ~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~l~~ 244 (302)
T 3olh_A 165 AEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRH 244 (302)
T ss_dssp CCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCCHHHHHH
T ss_pred CccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCCHHHHHH
Confidence 13788999888864 5899999999999 789999999999976654 578889999988
Q ss_pred HHhc--cCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcc
Q 029759 130 VSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLL 181 (188)
Q Consensus 130 ~~~~--l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~ 181 (188)
.+.. ++++++||+||++|.||+.++..|+.+||+++ +|+|||.+|..+++|.
T Consensus 245 ~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 245 LFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 8774 67889999999999999999999999999988 8999999999988774
No 8
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.93 E-value=1.5e-26 Score=161.10 Aligned_cols=97 Identities=22% Similarity=0.207 Sum_probs=86.6
Q ss_pred ccCHHHHHHHHh--CCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHH
Q 029759 74 SVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 74 ~i~~~~~~~~l~--~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~ 151 (188)
.|+++++.++++ ++.+|||+|+++||..||||||+|+|+. .+......++++++||+||.+|.+|.
T Consensus 3 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~yC~~g~rs~ 70 (103)
T 3eme_A 3 SITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRSA 70 (103)
T ss_dssp EECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHHH
T ss_pred ccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhCCCCCeEEEECCCChHHH
Confidence 588999999884 3499999999999999999999999984 34455556788999999999999999
Q ss_pred HHHHHHHHCCCCce-EecCcHHhhhhCCCcccc
Q 029759 152 MAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 152 ~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~ 183 (188)
.+++.|+..|| ++ +|.||+.+|..+|+|+++
T Consensus 71 ~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 71 KVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 99999999999 77 799999999999999875
No 9
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.93 E-value=8.5e-26 Score=184.57 Aligned_cols=165 Identities=16% Similarity=0.215 Sum_probs=134.0
Q ss_pred CccCCCchhh-hhcccccccCCceeEEeecC--CCc-----------ccccccccccccc---cccCCC-----------
Q 029759 21 PVLCPHGNNR-RGLLSLTVDQQRCDNIGFIS--SKI-----------LSFCPKASLRGNL---EAVGVP----------- 72 (188)
Q Consensus 21 ~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~~--~~~-----------~~~~~~~~~~~~~---~~~~~~----------- 72 (188)
+.+.|+.+.| +.+..++++..+.+|+|+.. +.. ++|.++..++|++ ...+.+
T Consensus 71 ~~~lp~~~~~~~~l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~ 150 (296)
T 1rhs_A 71 EVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSRPEPA 150 (296)
T ss_dssp SSCCCCHHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCCCCCC
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCCCCCCC
Confidence 4566777888 77777888888999999776 433 2677777777766 111111
Q ss_pred ---------cccCHHHHHHHHh-CCCEEEecCChhhH------------hcCCCCCeEEcCcccccC-CCCCCCHHHHHH
Q 029759 73 ---------TSVPVRVAHELLQ-AGHRYLDVRTPEEF------------SAGHATGAINVPYMYRVG-SGMTKNLKFVEE 129 (188)
Q Consensus 73 ---------~~i~~~~~~~~l~-~~~~iIDvR~~~ef------------~~ghIpgAinip~~~~~~-~~~~~~~~~l~~ 129 (188)
..++++++.++++ .+.+|||||+++|| ..||||||+|+|+.+... ++.+.+.+.++.
T Consensus 151 ~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~~~~~l~~ 230 (296)
T 1rhs_A 151 IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRA 230 (296)
T ss_dssp CCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred CcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCCCHHHHHH
Confidence 2478999999886 45899999999999 789999999999976654 577888888888
Q ss_pred HHhc--cCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhh-CCCcccccc
Q 029759 130 VSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFL-SNQLLTEEK 185 (188)
Q Consensus 130 ~~~~--l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~-~g~p~~~~~ 185 (188)
.+.. ++++++||+||++|.||+.++..|..+||+++ +|.|||.+|.. .++|+++..
T Consensus 231 ~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 231 MFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp HHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred HHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 7764 67899999999999999999999999999988 79999999998 699998754
No 10
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.93 E-value=9.7e-26 Score=186.24 Aligned_cols=163 Identities=19% Similarity=0.178 Sum_probs=134.3
Q ss_pred cCCCchhh-hhcccccccCCceeEEeecCCC-----------cccccccccccccc---cccCCC---------------
Q 029759 23 LCPHGNNR-RGLLSLTVDQQRCDNIGFISSK-----------ILSFCPKASLRGNL---EAVGVP--------------- 72 (188)
Q Consensus 23 ~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~~--------------- 72 (188)
..|+...| +++..+|++..+.+|+|+..+. .+++.++.+++|++ ...+.+
T Consensus 92 ~~~~~~~~~~~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~ 171 (318)
T 3hzu_A 92 DYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPV 171 (318)
T ss_dssp SBCCHHHHHHHHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCC
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCCCCCCCcccc
Confidence 45677888 8888888899999999987654 12777777777665 111110
Q ss_pred -------cccCHHHHHHHHhCCCEEEecCChhhHhc----------------CCCCCeEEcCcccccC-CCCCCCHHHHH
Q 029759 73 -------TSVPVRVAHELLQAGHRYLDVRTPEEFSA----------------GHATGAINVPYMYRVG-SGMTKNLKFVE 128 (188)
Q Consensus 73 -------~~i~~~~~~~~l~~~~~iIDvR~~~ef~~----------------ghIpgAinip~~~~~~-~~~~~~~~~l~ 128 (188)
..++++++.++++++ +|||+|+++||.. ||||||+|+|+.+.+. ++.+++.+.++
T Consensus 172 ~~~~~~~~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~ 250 (318)
T 3hzu_A 172 VQRNDAPIRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELE 250 (318)
T ss_dssp CCCCCTTTBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTTSCBCCHHHHH
T ss_pred ccCCCccccccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCCCcCCCHHHHH
Confidence 136789999998876 9999999999998 9999999999976554 68888989999
Q ss_pred HHHhccCCCCcEEEEcCCChHHHHHHHHHHH-CCCCce-EecCcHHhhhh-CCCccccccc
Q 029759 129 EVSTRFRKHDEIIVGCQSGKRSMMAATDLLN-AVSTHA-NYPSKPLTWFL-SNQLLTEEKL 186 (188)
Q Consensus 129 ~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~-~G~~~v-~l~GG~~~W~~-~g~p~~~~~~ 186 (188)
+.+..++++++||+||++|.||+.++..|.. +||+++ +|+|||.+|.. .++|++++..
T Consensus 251 ~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~ 311 (318)
T 3hzu_A 251 RLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEE 311 (318)
T ss_dssp HHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSS
T ss_pred HHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCCC
Confidence 9887788999999999999999999999997 999988 79999999996 5999998653
No 11
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.93 E-value=6.2e-26 Score=159.30 Aligned_cols=100 Identities=22% Similarity=0.221 Sum_probs=90.1
Q ss_pred cccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHH
Q 029759 73 TSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 73 ~~i~~~~~~~~l~~-~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~ 151 (188)
..++++++.+++++ +.+|||+|+++||..||||||+|+|+. .+...+..++++++||+||.+|.+|.
T Consensus 5 ~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivvyc~~g~rs~ 72 (108)
T 1gmx_A 5 ECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTND------------TLGAFMRDNDFDTPVMVMCYHGNSSK 72 (108)
T ss_dssp EEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHH------------HHHHHHHHSCTTSCEEEECSSSSHHH
T ss_pred cccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHH------------HHHHHHHhcCCCCCEEEEcCCCchHH
Confidence 46899999999876 499999999999999999999999983 56666666889999999999999999
Q ss_pred HHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 152 MAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 152 ~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
.+++.|+..||+++ +|.||+.+|..+ +|++++.
T Consensus 73 ~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~~ 106 (108)
T 1gmx_A 73 GAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVAY 106 (108)
T ss_dssp HHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEEC
T ss_pred HHHHHHHHcCCceEEEecCCHHHHHHh-CCccccc
Confidence 99999999999998 799999999999 9998764
No 12
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.93 E-value=7.7e-26 Score=182.35 Aligned_cols=164 Identities=18% Similarity=0.131 Sum_probs=128.9
Q ss_pred CCccCCCchhh-hhcccccccCCceeEEeecCCC-c----------ccccccccccccc---cccCCC------------
Q 029759 20 PPVLCPHGNNR-RGLLSLTVDQQRCDNIGFISSK-I----------LSFCPKASLRGNL---EAVGVP------------ 72 (188)
Q Consensus 20 ~~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~-~----------~~~~~~~~~~~~~---~~~~~~------------ 72 (188)
.+.+.|+.+.| +++..++++..+.+|+|+..+. . .++.++..++|++ ...+.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~~~~~~~ 138 (271)
T 1e0c_A 59 APGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGP 138 (271)
T ss_dssp CTTSCCCHHHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCCCCCCSC
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCCCCCCCC
Confidence 35567888899 7777777888899999987664 1 1677777777765 111111
Q ss_pred --------cccCHHHHHHHHhCC-CEEEecCChhhHh--------cCCCCCeEEcCcccccC-CCCCCCHHHHHHHHh--
Q 029759 73 --------TSVPVRVAHELLQAG-HRYLDVRTPEEFS--------AGHATGAINVPYMYRVG-SGMTKNLKFVEEVST-- 132 (188)
Q Consensus 73 --------~~i~~~~~~~~l~~~-~~iIDvR~~~ef~--------~ghIpgAinip~~~~~~-~~~~~~~~~l~~~~~-- 132 (188)
..++++++.++++++ .+|||+|+++||. .||||||+|+|+.+... ++.+..++.+++.+.
T Consensus 139 ~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~ 218 (271)
T 1e0c_A 139 VALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEEL 218 (271)
T ss_dssp CCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHT
T ss_pred ccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCCCCCCHHHHHHHHHHc
Confidence 136899999988764 8999999999999 99999999999875443 223333366666666
Q ss_pred ccCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhhC-CCcccc
Q 029759 133 RFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLS-NQLLTE 183 (188)
Q Consensus 133 ~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~-g~p~~~ 183 (188)
.++++++||+||++|.+|+.+++.|+.+||+++ +|.|||.+|... ++|+++
T Consensus 219 ~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 219 GITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp TCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred CCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 478899999999999999999999999999988 899999999998 999874
No 13
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.93 E-value=8e-26 Score=158.41 Aligned_cols=97 Identities=23% Similarity=0.277 Sum_probs=79.3
Q ss_pred HHHHHHhC---CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHHHHH
Q 029759 79 VAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAAT 155 (188)
Q Consensus 79 ~~~~~l~~---~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~ 155 (188)
+++++++. +++|||+|+++||..||||||+|+|+. ++.......++++++||+||.+|.+|..+++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~ 70 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQAVN 70 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHHHH
Confidence 55666652 489999999999999999999999995 3334444568889999999999999999999
Q ss_pred HHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 156 DLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 156 ~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
.|+.+||+++ +|.||+.+|..+++|+++...
T Consensus 71 ~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 71 LLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp HHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred HHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 9999999998 799999999999999988654
No 14
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.92 E-value=3.2e-25 Score=163.07 Aligned_cols=100 Identities=21% Similarity=0.248 Sum_probs=88.7
Q ss_pred cCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHH
Q 029759 75 VPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 75 i~~~~~~~~l~~---~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~ 151 (188)
|+++++.++++. +++|||+|++.||..||||||+|+|+. ++.......++++++||+||.+|.+|.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~rs~ 70 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTS 70 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChHHH
Confidence 789999999873 389999999999999999999999995 333334456888999999999999999
Q ss_pred HHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 152 MAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 152 ~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
.+++.|..+||+++ +|.||+.+|..+|+|+++..
T Consensus 71 ~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 105 (141)
T 3ilm_A 71 QAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGII 105 (141)
T ss_dssp HHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCC
Confidence 99999999999998 79999999999999998865
No 15
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.3e-25 Score=160.65 Aligned_cols=110 Identities=23% Similarity=0.250 Sum_probs=94.8
Q ss_pred cccCHHHHHHHHh---CCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc--cCCCCcEEEEcCCC
Q 029759 73 TSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR--FRKHDEIIVGCQSG 147 (188)
Q Consensus 73 ~~i~~~~~~~~l~---~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~--l~~~~~ivv~C~sG 147 (188)
..|+++++.++++ .+++|||||+++||..||||||+|+|+.+ +......+++.+...+.. ++++++||+||.+|
T Consensus 23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~G 101 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRS-HPDAFALDPLEFEKQIGIPKPDSAKELIFYCASG 101 (139)
T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTT-CTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSSS
T ss_pred ceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHH-hhhhccCCHHHHHHHHhccCCCCCCeEEEECCCC
Confidence 4699999999986 35899999999999999999999999864 344445566677776653 57889999999999
Q ss_pred hHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccc
Q 029759 148 KRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 148 ~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~ 183 (188)
.+|..++..|..+||+++ +|.||+.+|..+|+|+..
T Consensus 102 ~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 102 KRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp HHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred chHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 999999999999999998 799999999999999864
No 16
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.92 E-value=8e-25 Score=177.57 Aligned_cols=163 Identities=20% Similarity=0.205 Sum_probs=130.2
Q ss_pred cCCCchhh-hhcccccccCCceeEEeecCCCc-----------cccccccccccccc---ccCCC---------------
Q 029759 23 LCPHGNNR-RGLLSLTVDQQRCDNIGFISSKI-----------LSFCPKASLRGNLE---AVGVP--------------- 72 (188)
Q Consensus 23 ~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~--------------- 72 (188)
..|+.+.| +++..++++..+.+|+|+..+.. .++.++..++|++. ..+.+
T Consensus 60 ~~~~~~~~~~~~~~~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~ 139 (285)
T 1uar_A 60 DFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEV 139 (285)
T ss_dssp SBCCHHHHHHHHHHTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCCCCCCCCCC
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCCcccCCCccc
Confidence 44666778 77777778888888888765431 26767777776651 11111
Q ss_pred ------cccCHHHHHHHHh----CCCEEEecCChhhHh----------------cCCCCCeEEcCcccccC-CCCCCCHH
Q 029759 73 ------TSVPVRVAHELLQ----AGHRYLDVRTPEEFS----------------AGHATGAINVPYMYRVG-SGMTKNLK 125 (188)
Q Consensus 73 ------~~i~~~~~~~~l~----~~~~iIDvR~~~ef~----------------~ghIpgAinip~~~~~~-~~~~~~~~ 125 (188)
..++++++.++++ .+..|||+|++.||. .||||||+|+|+.+... ++.+.+.+
T Consensus 140 ~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~ 219 (285)
T 1uar_A 140 PYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAE 219 (285)
T ss_dssp CCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHH
T ss_pred ccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCCCcCCCHH
Confidence 1389999999884 446899999999998 79999999999876554 57788889
Q ss_pred HHHHHHhc--cCCCCcEEEEcCCChHHHHHHHHHH-HCCCCce-EecCcHHhhh-hCCCcccccc
Q 029759 126 FVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLL-NAVSTHA-NYPSKPLTWF-LSNQLLTEEK 185 (188)
Q Consensus 126 ~l~~~~~~--l~~~~~ivv~C~sG~~a~~a~~~L~-~~G~~~v-~l~GG~~~W~-~~g~p~~~~~ 185 (188)
.+.+.+.. ++++++||+||++|.+|+.+++.|+ .+||+++ +|+|||.+|. ..++|++++.
T Consensus 220 ~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g~ 284 (285)
T 1uar_A 220 ELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE 284 (285)
T ss_dssp HHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred HHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccCC
Confidence 99888887 7889999999999999999999999 9999988 8999999998 6799998753
No 17
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.92 E-value=9.2e-25 Score=176.55 Aligned_cols=161 Identities=20% Similarity=0.181 Sum_probs=127.5
Q ss_pred cCCCchhh-hhcccccccCCceeEEeecCCCc-----------ccccccccccccc---cccCCCc--------------
Q 029759 23 LCPHGNNR-RGLLSLTVDQQRCDNIGFISSKI-----------LSFCPKASLRGNL---EAVGVPT-------------- 73 (188)
Q Consensus 23 ~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~~-----------~~~~~~~~~~~~~---~~~~~~~-------------- 73 (188)
..|+.+.| +++..++++..+.+|+|+..+.. .++.++..++|++ ...+.+.
T Consensus 58 ~~~~~~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~ 137 (277)
T 3aay_A 58 DFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTA 137 (277)
T ss_dssp SBCCHHHHHHHHHHHTCCTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCCCCCCCCCCC
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCCCcCCCCccc
Confidence 44666778 77777778888888999776432 2677777777765 1111110
Q ss_pred -------ccCHHHHHHHHhCCCEEEecCChhhHhc----------------CCCCCeEEcCcccccC-CCCCCCHHHHHH
Q 029759 74 -------SVPVRVAHELLQAGHRYLDVRTPEEFSA----------------GHATGAINVPYMYRVG-SGMTKNLKFVEE 129 (188)
Q Consensus 74 -------~i~~~~~~~~l~~~~~iIDvR~~~ef~~----------------ghIpgAinip~~~~~~-~~~~~~~~~l~~ 129 (188)
.++++++.+++.++. |||+|+++||.. ||||||+|+|+.+... ++.+.+.+.+.+
T Consensus 138 ~~~~~~~~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~ 216 (277)
T 3aay_A 138 SPPDNTIRAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAK 216 (277)
T ss_dssp CCCCGGGEECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred cCcccchhcCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCCHHHHHH
Confidence 167899998887655 999999999985 9999999999975543 577888888888
Q ss_pred HHhc--cCCCCcEEEEcCCChHHHHHHHHHHH-CCCCce-EecCcHHhhhh-CCCccccc
Q 029759 130 VSTR--FRKHDEIIVGCQSGKRSMMAATDLLN-AVSTHA-NYPSKPLTWFL-SNQLLTEE 184 (188)
Q Consensus 130 ~~~~--l~~~~~ivv~C~sG~~a~~a~~~L~~-~G~~~v-~l~GG~~~W~~-~g~p~~~~ 184 (188)
.+.. ++++++||+||++|.+|+.+++.|+. +||+++ +|+|||.+|.. .++|++++
T Consensus 217 ~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 217 LYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp HHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred HHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 7764 68899999999999999999999995 999998 89999999999 79999874
No 18
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.92 E-value=6.9e-25 Score=160.47 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=90.3
Q ss_pred CcccCHHHHHHHHh-C-CCEEEecCChhhHhc-CC--CCCeEEcCcccccCCCCCCCHHHHHH--HHhccCCCCcEEEEc
Q 029759 72 PTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GH--ATGAINVPYMYRVGSGMTKNLKFVEE--VSTRFRKHDEIIVGC 144 (188)
Q Consensus 72 ~~~i~~~~~~~~l~-~-~~~iIDvR~~~ef~~-gh--IpgAinip~~~~~~~~~~~~~~~l~~--~~~~l~~~~~ivv~C 144 (188)
...|+++++.++++ + +++|||||+++||.. || ||||+|+|+. .+.. .+..++++++||+||
T Consensus 22 ~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~------------~l~~~~~~~~l~~~~~ivvyC 89 (137)
T 1qxn_A 22 MVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRG------------KLEPLLAKSGLDPEKPVVVFC 89 (137)
T ss_dssp SEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTT------------TSHHHHHHHCCCTTSCEEEEC
T ss_pred CcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchH------------HhhhHHhhccCCCCCeEEEEc
Confidence 34699999999987 4 499999999999999 99 9999999985 1222 345578899999999
Q ss_pred CCChHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 145 QSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 145 ~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
.+|.||..+++.|+..||+++ +|.||+.+|..+++|++++..
T Consensus 90 ~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 132 (137)
T 1qxn_A 90 KTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSH 132 (137)
T ss_dssp CSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred CCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccc
Confidence 999999999999999999988 799999999999999987654
No 19
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.92 E-value=6.5e-25 Score=160.40 Aligned_cols=104 Identities=18% Similarity=0.203 Sum_probs=86.4
Q ss_pred CcccCHHHHHHHHh--C-CCEEEecCChhhHhc-CCCCCeEEcCcccccCCCCCCCHHHHHHHH--------hccCCCCc
Q 029759 72 PTSVPVRVAHELLQ--A-GHRYLDVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVS--------TRFRKHDE 139 (188)
Q Consensus 72 ~~~i~~~~~~~~l~--~-~~~iIDvR~~~ef~~-ghIpgAinip~~~~~~~~~~~~~~~l~~~~--------~~l~~~~~ 139 (188)
...|+++++.++++ + +.+|||||++.||.. ||||||+|+|+. .+.... ..++++++
T Consensus 21 ~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~------------~l~~~~~~~~~~~~~~~~~~~~ 88 (139)
T 2hhg_A 21 IETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRG------------MLEFWIDPQSPYAKPIFQEDKK 88 (139)
T ss_dssp SEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGG------------GHHHHHCTTSTTCCGGGGSSSE
T ss_pred cCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChH------------HHHHhcCccchhhhccCCCCCe
Confidence 34699999999997 3 489999999999999 999999999985 222221 13578899
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccccC
Q 029759 140 IIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKLK 187 (188)
Q Consensus 140 ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~~ 187 (188)
||+||.+|.+|..+++.|+.+||++| +|.||+.+|..+|+|+++...+
T Consensus 89 ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~ 137 (139)
T 2hhg_A 89 FVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAPK 137 (139)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC-----
T ss_pred EEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCCC
Confidence 99999999999999999999999988 7999999999999999986543
No 20
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.91 E-value=7.2e-25 Score=187.29 Aligned_cols=161 Identities=11% Similarity=-0.000 Sum_probs=135.3
Q ss_pred CCCchhh-hhcccccccCCceeEEeecCC---------CcccccccccccccccccC-------CCcccCHHHHHHHHh-
Q 029759 24 CPHGNNR-RGLLSLTVDQQRCDNIGFISS---------KILSFCPKASLRGNLEAVG-------VPTSVPVRVAHELLQ- 85 (188)
Q Consensus 24 ~p~~~~~-~~~~~~~~~~~~~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~l~- 85 (188)
.|+.+.| +++..+|++.++.+|+|+... ..+|+.++..+++++.+.+ ....++++++.++++
T Consensus 58 lp~~~~f~~~~~~lgi~~~~~vVvy~~~~~a~r~~w~l~~~G~~~V~vl~Gg~~~~g~~~~~~~~~~~i~~~~l~~~~~~ 137 (423)
T 2wlr_A 58 KMSTEQLNAWIKQHNLKTDAPVALYGNDKDVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQG 137 (423)
T ss_dssp GCCHHHHHHHHHHTTCCTTSCEEEESCHHHHHHHHHHHHHTTCCCEEEBTTTTSCGGGCBCCTTGGGEECHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEECCCCCHHHHHHHHHHcCCceeEeccchhhcCCCcccCCCCCcccCHHHHHHHhhc
Confidence 5678899 888888999999999997652 2338888888888764421 123589999998886
Q ss_pred --------CCCEEEecC--ChhhHhcCCCCCeEEcCcccccC--CCCCCCHHHHHHHHhc--cCCCCcEEEEcCCChHHH
Q 029759 86 --------AGHRYLDVR--TPEEFSAGHATGAINVPYMYRVG--SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 86 --------~~~~iIDvR--~~~ef~~ghIpgAinip~~~~~~--~~~~~~~~~l~~~~~~--l~~~~~ivv~C~sG~~a~ 151 (188)
.+.+|||+| ++++|..||||||+|+|+.+... .+.+++++.+++.+.. ++++++||+||++|.+|+
T Consensus 138 ~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~ 217 (423)
T 2wlr_A 138 KEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAA 217 (423)
T ss_dssp CCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHH
T ss_pred cccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHH
Confidence 248999999 99999999999999999975543 4778888999888865 578999999999999999
Q ss_pred HHHHHHHHCCCCce-EecCcHHhhhhCCCccccc
Q 029759 152 MAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 152 ~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
.+++.|+.+||+++ +|+|||.+|...++|++++
T Consensus 218 ~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g 251 (423)
T 2wlr_A 218 RVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERG 251 (423)
T ss_dssp HHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCS
T ss_pred HHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccC
Confidence 99999999999988 8999999999999999884
No 21
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.91 E-value=5.4e-25 Score=150.84 Aligned_cols=91 Identities=20% Similarity=0.154 Sum_probs=76.0
Q ss_pred ccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHHH
Q 029759 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMA 153 (188)
Q Consensus 74 ~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a 153 (188)
.++++++.++++++.+|||+|+++||..||||||+|+|+. .+...+..+++ ++||+||.+|.+|..+
T Consensus 3 ~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gAi~ip~~------------~l~~~~~~l~~-~~ivvyC~~g~rs~~a 69 (94)
T 1wv9_A 3 KVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAEWVPLE------------KIQKGEHGLPR-RPLLLVCEKGLLSQVA 69 (94)
T ss_dssp EECGGGHHHHHHTTCEEEECCCC--CCSCCSSCCEECCHH------------HHTTTCCCCCS-SCEEEECSSSHHHHHH
T ss_pred cCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCCEECCHH------------HHHHHHHhCCC-CCEEEEcCCCChHHHH
Confidence 4788899998887899999999999999999999999984 44444555778 9999999999999999
Q ss_pred HHHHHHCCCCce-EecCcHHhhhhCC
Q 029759 154 ATDLLNAVSTHA-NYPSKPLTWFLSN 178 (188)
Q Consensus 154 ~~~L~~~G~~~v-~l~GG~~~W~~~g 178 (188)
++.|+..||+ + +|.||+.+|..+|
T Consensus 70 ~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 70 ALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 9999999999 8 7999999998754
No 22
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.91 E-value=1.6e-24 Score=155.82 Aligned_cols=100 Identities=19% Similarity=0.101 Sum_probs=88.9
Q ss_pred cccCHHHHHHHHhC---CCEEEecCChhhH-hcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCCh
Q 029759 73 TSVPVRVAHELLQA---GHRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (188)
Q Consensus 73 ~~i~~~~~~~~l~~---~~~iIDvR~~~ef-~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~ 148 (188)
..|+++++.+++++ +++|||||++.|| ..||||||+|+|+ +.+...+..++++++||+||.+|.
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~------------~~l~~~~~~l~~~~~ivvyC~~g~ 82 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPA------------KDLATRIGELDPAKTYVVYDWTGG 82 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCH------------HHHHHHGGGSCTTSEEEEECSSSS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCH------------HHHHHHHhcCCCCCeEEEEeCCCC
Confidence 46899999999864 3899999999998 9999999999998 467777777889999999999999
Q ss_pred H--HHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 149 R--SMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 149 ~--a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
+ |..+++.|+..||+ + +|.||+.+|..+++|+.+..
T Consensus 83 r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~ 121 (124)
T 3flh_A 83 TTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH 121 (124)
T ss_dssp CSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred chHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence 8 89999999999998 7 79999999999999988754
No 23
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.91 E-value=1.3e-24 Score=160.24 Aligned_cols=101 Identities=19% Similarity=0.159 Sum_probs=87.1
Q ss_pred ccCHHHHHHHHhCC---CEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCC--h
Q 029759 74 SVPVRVAHELLQAG---HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG--K 148 (188)
Q Consensus 74 ~i~~~~~~~~l~~~---~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG--~ 148 (188)
.|+++++.++++++ ++|||||+++||..||||||+|+|+.+.. ......++++++||+||.+| .
T Consensus 17 ~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~-----------~~~~~~l~~~~~ivvyC~~g~~~ 85 (144)
T 3nhv_A 17 ETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKIN-----------EDTTKRLSKEKVIITYCWGPACN 85 (144)
T ss_dssp EEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCS-----------TTTTTTCCTTSEEEEECSCTTCC
T ss_pred ccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHh-----------HHHHhhCCCCCeEEEEECCCCcc
Confidence 58999999999754 89999999999999999999999985211 11334578899999999998 7
Q ss_pred HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 149 RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 149 ~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
+|..+++.|+.+||+ + +|.||+.+|..+|+|+++...
T Consensus 86 rs~~aa~~L~~~G~~-v~~l~GG~~~W~~~g~pv~~~~~ 123 (144)
T 3nhv_A 86 GATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEGTLG 123 (144)
T ss_dssp HHHHHHHHHHHTTCE-EEEEESHHHHHHHTTCCCBSSSG
T ss_pred HHHHHHHHHHHCCCe-EEEeCCcHHHHHHCCCCccCCCC
Confidence 999999999999994 7 799999999999999998654
No 24
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.90 E-value=6.5e-24 Score=149.58 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=77.4
Q ss_pred CCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc--cCCCCcEEEEcCCChHHHHHHHHHHHCCCC
Q 029759 86 AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLLNAVST 163 (188)
Q Consensus 86 ~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~--l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~ 163 (188)
++++|||||+++||..||||||+|+|+. .+...... ++++++||+||.+|.+|..+++.|+.+||+
T Consensus 15 ~~~~liDvR~~~e~~~ghIpgAi~ip~~------------~l~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~ 82 (110)
T 2k0z_A 15 NDFIVVDVRELDEYEELHLPNATLISVN------------DQEKLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGYT 82 (110)
T ss_dssp GGSEEEEEECHHHHHHSBCTTEEEEETT------------CHHHHHHHHHSCSSSCEEEECSSSHHHHHHHHHHHHTTCC
T ss_pred CCeEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhcccCCCCEEEEEeCCCchHHHHHHHHHHCCCC
Confidence 4589999999999999999999999985 23333332 678999999999999999999999999998
Q ss_pred ceEecCcHHhhhhCCCccccccc
Q 029759 164 HANYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 164 ~v~l~GG~~~W~~~g~p~~~~~~ 186 (188)
+.+|.||+.+|..+++|++++..
T Consensus 83 ~~~l~GG~~~W~~~g~p~~~~~~ 105 (110)
T 2k0z_A 83 PYYLEGNVYDFEKYGFRMVYDDT 105 (110)
T ss_dssp CEEEESCGGGTTTTTCCCBCCCS
T ss_pred EEEecCCHHHHHHCCCcEecCCC
Confidence 86699999999999999987543
No 25
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=5.7e-23 Score=151.92 Aligned_cols=112 Identities=23% Similarity=0.246 Sum_probs=86.0
Q ss_pred CcccCHHHHHHHHhC--CCEEEecCChhhHhc-CCC------CCeEEcCcccccCCCCCCCHHHHHHHHh-----ccCCC
Q 029759 72 PTSVPVRVAHELLQA--GHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVST-----RFRKH 137 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~--~~~iIDvR~~~ef~~-ghI------pgAinip~~~~~~~~~~~~~~~l~~~~~-----~l~~~ 137 (188)
...|+++++.+++++ +.+|||||+++||.. ||| |||+|+|+.+ .. +.. .+++..++.. .++++
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~-~~~-~~~~~~~l~~~l~~~~~~~~ 80 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SD-GTH-NDNFLAELRDRIPADADQHE 80 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TT-SCB-CTTHHHHHHHHCC-------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-cc-ccc-CHHHHHHHHHHHhhccCCCC
Confidence 346899999999873 599999999999997 999 9999999964 21 111 2223333322 24788
Q ss_pred CcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcH------------HhhhhCCCccccccc
Q 029759 138 DEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKP------------LTWFLSNQLLTEEKL 186 (188)
Q Consensus 138 ~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~------------~~W~~~g~p~~~~~~ 186 (188)
++||+||++|.+|..+++.|+.+||+++ +|.||+ .+|..+|+|++...+
T Consensus 81 ~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~~ 142 (148)
T 2fsx_A 81 RPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGRS 142 (148)
T ss_dssp CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC--
T ss_pred CEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCcccc
Confidence 9999999999999999999999999988 799999 689999999987643
No 26
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.88 E-value=1.8e-22 Score=172.46 Aligned_cols=162 Identities=12% Similarity=0.052 Sum_probs=122.3
Q ss_pred Cchhh-hhcccccccCCceeEEeecCCCcc----------ccccccccccccc---------ccCC--------------
Q 029759 26 HGNNR-RGLLSLTVDQQRCDNIGFISSKIL----------SFCPKASLRGNLE---------AVGV-------------- 71 (188)
Q Consensus 26 ~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~----------~~~~~~~~~~~~~---------~~~~-------------- 71 (188)
+.+.| +.+...+++..+.+|+|+..+... ++.++..++|++. ..+.
T Consensus 187 ~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~~~~~~~~~~~~~~ 266 (423)
T 2wlr_A 187 SDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKI 266 (423)
T ss_dssp CHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSSCCCCCCCCCCSSCS
T ss_pred CHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCCCCCCCCCcCccccc
Confidence 34455 344445667778888887653211 6666666665540 0000
Q ss_pred ----CcccCHHHHHHHHhC-CCEEEecCChhhH-----------hcCCCCCeEEcCcc-------ccc-CCCCCCCHHHH
Q 029759 72 ----PTSVPVRVAHELLQA-GHRYLDVRTPEEF-----------SAGHATGAINVPYM-------YRV-GSGMTKNLKFV 127 (188)
Q Consensus 72 ----~~~i~~~~~~~~l~~-~~~iIDvR~~~ef-----------~~ghIpgAinip~~-------~~~-~~~~~~~~~~l 127 (188)
...++.+++.+++++ +.+|||+|+++|| ..||||||+|+|+. +.. .++.+++.+.+
T Consensus 267 ~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l 346 (423)
T 2wlr_A 267 PAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDI 346 (423)
T ss_dssp CSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHH
T ss_pred CCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHHHHcCCCCcCCCHHHH
Confidence 013788999888765 4899999999999 78999999999975 222 25678888888
Q ss_pred HHHHh--ccCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhh-CCCcccccccC
Q 029759 128 EEVST--RFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFL-SNQLLTEEKLK 187 (188)
Q Consensus 128 ~~~~~--~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~-~g~p~~~~~~~ 187 (188)
.+.+. .++++++||+||++|.||+.++..|+.+||+++ +|.|||.+|.. .++|+++...+
T Consensus 347 ~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~~ 410 (423)
T 2wlr_A 347 TAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERG 410 (423)
T ss_dssp HHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSCC
T ss_pred HHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCCC
Confidence 88875 468899999999999999999999999999988 79999999998 69999986654
No 27
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.88 E-value=5.1e-23 Score=173.33 Aligned_cols=163 Identities=13% Similarity=0.111 Sum_probs=121.4
Q ss_pred CccCCCchhh-hhcccccccCCceeEEee-cCCCc-----------ccccccccccccc---cccCCCcc-----cCHH-
Q 029759 21 PVLCPHGNNR-RGLLSLTVDQQRCDNIGF-ISSKI-----------LSFCPKASLRGNL---EAVGVPTS-----VPVR- 78 (188)
Q Consensus 21 ~~~~p~~~~~-~~~~~~~~~~~~~~v~~~-~~~~~-----------~~~~~~~~~~~~~---~~~~~~~~-----i~~~- 78 (188)
+...|+.+.| +++..++++..+.+|+|+ ..+.. +|| ++.+++|++ ...+.+.. ..+.
T Consensus 74 ~~~lp~~~~f~~~l~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~~~~~~ 152 (373)
T 1okg_A 74 RHPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEPSSLPRP 152 (373)
T ss_dssp SSCCCCHHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCCCSCCCC
T ss_pred cccCCCHHHHHHHHHHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCCCcCccc
Confidence 4567788889 777778889899999998 33311 277 888888877 22222211 1100
Q ss_pred ----HH---------HHHHhCCCEEEecCChhhHh-----------cCCCCCeEEcCccccc--C-CCC-CCCHHHHHHH
Q 029759 79 ----VA---------HELLQAGHRYLDVRTPEEFS-----------AGHATGAINVPYMYRV--G-SGM-TKNLKFVEEV 130 (188)
Q Consensus 79 ----~~---------~~~l~~~~~iIDvR~~~ef~-----------~ghIpgAinip~~~~~--~-~~~-~~~~~~l~~~ 130 (188)
++ .+.+..+.+|||+|+++||. .||||||+|+|+.+.. . ++. +++.+.+++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~v~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~ 232 (373)
T 1okg_A 153 ATHWPFKTAFQHHYLVDEIPPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHN 232 (373)
T ss_dssp CCCCCSCSSCCSBCCGGGSCTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHH
T ss_pred cccccccccCChHHHHHHhccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHH
Confidence 00 00113458999999999999 9999999999997654 3 455 7788888888
Q ss_pred Hhcc----CC---CCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhh-CCCccccc
Q 029759 131 STRF----RK---HDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFL-SNQLLTEE 184 (188)
Q Consensus 131 ~~~l----~~---~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~-~g~p~~~~ 184 (188)
+..+ ++ +++||+||++|.||+.++..|+.+||+++ +|.|||.+|.. .++|+++.
T Consensus 233 ~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 233 IMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp HHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred HHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 7754 77 89999999999999999999999999988 89999999987 58887653
No 28
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.88 E-value=1.1e-22 Score=175.75 Aligned_cols=147 Identities=18% Similarity=0.134 Sum_probs=113.6
Q ss_pred CCCchhh-hhcccccccCCceeEEeecCCCc---------ccccccccccccc---cccCC----CcccCHHHHHHHHhC
Q 029759 24 CPHGNNR-RGLLSLTVDQQRCDNIGFISSKI---------LSFCPKASLRGNL---EAVGV----PTSVPVRVAHELLQA 86 (188)
Q Consensus 24 ~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~~~~~~~~---~~~~~----~~~i~~~~~~~~l~~ 86 (188)
.|-...| ++...++ +.++.+|+|+..... +++.++....+++ ...+. ...++++++.+++++
T Consensus 309 i~~~~~~~~~~~~l~-~~~~~vvvy~~~~~~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~~i~~~~l~~~~~~ 387 (474)
T 3tp9_A 309 IPWNKSFVTWAGWLL-PADRPIHLLAADAIAPDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYANVSPDEVRGALAQ 387 (474)
T ss_dssp CCSSTTHHHHHHHHC-CSSSCEEEECCTTTHHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCEEECHHHHHHTTTT
T ss_pred ECcchHHHHHHHhcC-CCCCeEEEEECCCcHHHHHHHHHHcCCcceEEecCcHHHHHhcccccccccccCHHHHHHHhcC
Confidence 3444467 6666666 667777777665432 2566555422233 11121 235899999998875
Q ss_pred -CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCce
Q 029759 87 -GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA 165 (188)
Q Consensus 87 -~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v 165 (188)
+.+|||+|+++||..||||||+|+|+. .+...+..++++++||+||++|.+|+.++..|+.+||+++
T Consensus 388 ~~~~lvDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v 455 (474)
T 3tp9_A 388 QGLWLLDVRNVDEWAGGHLPQAHHIPLS------------KLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDV 455 (474)
T ss_dssp TCCEEEECSCHHHHHHCBCTTCEECCHH------------HHTTTGGGSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSE
T ss_pred CCcEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCE
Confidence 599999999999999999999999984 5555666788999999999999999999999999999988
Q ss_pred -EecCcHHhhhhCCCcccc
Q 029759 166 -NYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 166 -~l~GG~~~W~~~g~p~~~ 183 (188)
+|.|||.+|..+++|+++
T Consensus 456 ~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 456 RNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp EEETTHHHHHHHTTCCCBC
T ss_pred EEecChHHHHHhCCCCCCC
Confidence 799999999999999874
No 29
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.88 E-value=7.6e-23 Score=137.48 Aligned_cols=75 Identities=32% Similarity=0.426 Sum_probs=66.8
Q ss_pred CEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc--CCCCcEEEEcCCChHHHHHHHHHHHCCCCce
Q 029759 88 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGKRSMMAATDLLNAVSTHA 165 (188)
Q Consensus 88 ~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l--~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v 165 (188)
++|||+|+++||..||||||+|+|+. .+...+..+ +++++||+||.+|.+|..+++.|+.+||+++
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPLK------------EVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCHH------------HHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSE
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCHH------------HHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCE
Confidence 57999999999999999999999984 555555555 7889999999999999999999999999999
Q ss_pred -EecCcHHhhh
Q 029759 166 -NYPSKPLTWF 175 (188)
Q Consensus 166 -~l~GG~~~W~ 175 (188)
++ |||.+|.
T Consensus 70 ~~l-GG~~~w~ 79 (85)
T 2jtq_A 70 ENA-GGLKDIA 79 (85)
T ss_dssp EEE-EETTTCC
T ss_pred Eec-cCHHHHh
Confidence 56 9999994
No 30
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.87 E-value=4.2e-22 Score=160.41 Aligned_cols=115 Identities=16% Similarity=0.094 Sum_probs=98.2
Q ss_pred CcccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCeEEcCcccccC-----CCCCCCHHHHHHHHhc--cCCCCcEEEE
Q 029759 72 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVSTR--FRKHDEIIVG 143 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~-~~~iIDvR~~~ef~~ghIpgAinip~~~~~~-----~~~~~~~~~l~~~~~~--l~~~~~ivv~ 143 (188)
+..|+++++.+++++ +.+|||+|++.||..||||||+|+|+..... .+.+.+.+.+.+.+.. ++++++||+|
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 457999999998864 5899999999999999999999999864332 2456667777777666 6789999999
Q ss_pred cCCCh-HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 144 CQSGK-RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 144 C~sG~-~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
|.+|. +|.++++.|+.+||+++ +|.||+.+|..+++|+++...
T Consensus 88 c~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~ 132 (271)
T 1e0c_A 88 DDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 (271)
T ss_dssp CSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred cCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence 99987 99999999999999998 799999999999999987543
No 31
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.87 E-value=4.4e-23 Score=153.39 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=87.1
Q ss_pred cccCHHHHHHHHhC-CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcC-CChHH
Q 029759 73 TSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ-SGKRS 150 (188)
Q Consensus 73 ~~i~~~~~~~~l~~-~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~-sG~~a 150 (188)
..|+++++.+++++ +.+|||+|+++||..||||||+|+|+.+.. +.+.+....++++++||+||+ +|.++
T Consensus 28 ~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~~G~rs 99 (152)
T 1t3k_A 28 SYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFD--------DKISHLVQNVKDKDTLVFHSALSQVRG 99 (152)
T ss_dssp EEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSS--------TTHHHHHHTCCSCCEEEESSSCCSSSH
T ss_pred ceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCCCCcch
Confidence 46788888877753 489999999999999999999999985221 234555555678899999999 89999
Q ss_pred HHHHHHHH--------HCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 151 MMAATDLL--------NAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 151 ~~a~~~L~--------~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
..++..|. ..||+++ +|+||+.+|..+++|+++..+
T Consensus 100 ~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 100 PTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp HHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 88888774 3899988 799999999999999988654
No 32
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.87 E-value=7.8e-22 Score=162.80 Aligned_cols=113 Identities=12% Similarity=0.106 Sum_probs=97.0
Q ss_pred cccCHHHHHHHHhC-CCEEEecCChhh-HhcCCCCCeEEcCccccc---CCCCCCCHHHHHHHHhc--cCCCCcEEEEcC
Q 029759 73 TSVPVRVAHELLQA-GHRYLDVRTPEE-FSAGHATGAINVPYMYRV---GSGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 145 (188)
Q Consensus 73 ~~i~~~~~~~~l~~-~~~iIDvR~~~e-f~~ghIpgAinip~~~~~---~~~~~~~~~~l~~~~~~--l~~~~~ivv~C~ 145 (188)
..|+++++.+++++ +++|||+|++.| |..||||||+|+|+...+ ..+.+.+++.+...+.. ++++++||+||.
T Consensus 40 ~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc~ 119 (318)
T 3hzu_A 40 RLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGD 119 (318)
T ss_dssp GEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECS
T ss_pred ceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 36999999999965 489999999876 999999999999975323 24566677788887776 678999999999
Q ss_pred CCh-HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 146 SGK-RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 146 sG~-~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
+|. +|.++++.|+.+||++| +|+||+.+|..+|+|+++..
T Consensus 120 ~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 161 (318)
T 3hzu_A 120 KSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDV 161 (318)
T ss_dssp GGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCC
T ss_pred CCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCC
Confidence 887 89999999999999998 79999999999999998853
No 33
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.87 E-value=2.7e-22 Score=144.91 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=76.9
Q ss_pred ccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCC----------CC-----------CCCHHHHHHHHh
Q 029759 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS----------GM-----------TKNLKFVEEVST 132 (188)
Q Consensus 74 ~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~----------~~-----------~~~~~~l~~~~~ 132 (188)
.++++++.+ .++++|||||++.||..||||||+|+|+...... +. ......+...+.
T Consensus 6 ~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (134)
T 3g5j_A 6 VIKIEKALK--LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQAA 83 (134)
T ss_dssp EECHHHHTT--CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred ccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHHHHHH
Confidence 578888776 4569999999999999999999999998521100 00 000012333344
Q ss_pred ccCCC-CcEEEEc-CCChHHHHHHHHHHHCCCCce-EecCcHHhhhhC
Q 029759 133 RFRKH-DEIIVGC-QSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLS 177 (188)
Q Consensus 133 ~l~~~-~~ivv~C-~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~ 177 (188)
.++++ ++||+|| .+|.+|..+++.|+.+|| ++ +|.||+.+|...
T Consensus 84 ~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 84 ELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 46677 9999999 589999999999999999 78 799999999764
No 34
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.86 E-value=1e-21 Score=158.91 Aligned_cols=114 Identities=16% Similarity=0.072 Sum_probs=97.0
Q ss_pred cccCHHHHHHHHhC-CCEEEecC----------ChhhHhcCCCCCeEEcCcccccC-----CCCCCCHHHHHHHHhc--c
Q 029759 73 TSVPVRVAHELLQA-GHRYLDVR----------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVSTR--F 134 (188)
Q Consensus 73 ~~i~~~~~~~~l~~-~~~iIDvR----------~~~ef~~ghIpgAinip~~~~~~-----~~~~~~~~~l~~~~~~--l 134 (188)
..|+++++.+++++ +.+|||+| ++.||..||||||+|+|+..... .+.+.+.+.+...+.. +
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi 83 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGV 83 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTTC
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 36899999998874 58999999 78899999999999999864332 1355667777777766 5
Q ss_pred CCCCcEEEEcCCChH-HHHHHHHHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 135 RKHDEIIVGCQSGKR-SMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~-a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
+++++||+||++|.+ |.++++.|+.+||++| +|+||+.+|..+++|+++...
T Consensus 84 ~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 84 NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 789999999999988 9999999999999998 799999999999999988543
No 35
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.86 E-value=7.5e-22 Score=143.61 Aligned_cols=107 Identities=19% Similarity=0.212 Sum_probs=86.7
Q ss_pred cccCHHHHHHHHh-C-CCEEEecCChhhHhc-CCC------CCeEEcCcccccCCCCCCCHHHHHHHHhcc--CCCCcEE
Q 029759 73 TSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEII 141 (188)
Q Consensus 73 ~~i~~~~~~~~l~-~-~~~iIDvR~~~ef~~-ghI------pgAinip~~~~~~~~~~~~~~~l~~~~~~l--~~~~~iv 141 (188)
..|+++++.++++ + +++|||||+++||.. +|+ |||+|||+.+. .+.+++......+ +++++||
T Consensus 5 ~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~------~~~~~~~~l~~~~~~~~~~~iv 78 (134)
T 1vee_A 5 SSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE------DKPGFLKKLSLKFKDPENTTLY 78 (134)
T ss_dssp CBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGG------GHHHHHHHHHTTCSCGGGCEEE
T ss_pred CccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccc------cChhHHHHHHHHhCCCCCCEEE
Confidence 3689999999986 3 589999999999985 443 79999998521 1233444443333 6789999
Q ss_pred EEcCCChHHHHHHHHHHHCCCCce-EecCcH---HhhhhCCCcccccc
Q 029759 142 VGCQSGKRSMMAATDLLNAVSTHA-NYPSKP---LTWFLSNQLLTEEK 185 (188)
Q Consensus 142 v~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~---~~W~~~g~p~~~~~ 185 (188)
+||.+|.||..++..|+.+||+++ ++.||+ .+|..+|+|+++..
T Consensus 79 v~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~ 126 (134)
T 1vee_A 79 ILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPK 126 (134)
T ss_dssp EECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCC
T ss_pred EEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCC
Confidence 999999999999999999999988 799999 78999999998754
No 36
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.86 E-value=4.2e-22 Score=142.91 Aligned_cols=103 Identities=21% Similarity=0.186 Sum_probs=78.9
Q ss_pred ccCHHHHHHHHhCC--CEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHH---HHHHh----c--cCCCCcEEE
Q 029759 74 SVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV---EEVST----R--FRKHDEIIV 142 (188)
Q Consensus 74 ~i~~~~~~~~l~~~--~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l---~~~~~----~--l~~~~~ivv 142 (188)
.|+++++.++++++ ++|||||+++||..||||||+|+|+.+.... ....+ ...+. . ++++++||+
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~ivv 77 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPIYV 77 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEEEE
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeEEE
Confidence 47899999998653 8999999999999999999999998532211 11111 11111 1 234569999
Q ss_pred EcCCChHHHHHHHHHHHC------CCCce-EecCcHHhhhhCCCc
Q 029759 143 GCQSGKRSMMAATDLLNA------VSTHA-NYPSKPLTWFLSNQL 180 (188)
Q Consensus 143 ~C~sG~~a~~a~~~L~~~------G~~~v-~l~GG~~~W~~~g~p 180 (188)
||.+|.+|..+++.|..+ ||.++ +|.|||.+|..+..|
T Consensus 78 ~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 78 ICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp ECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred EcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 999999999999999998 68888 799999999987555
No 37
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.85 E-value=3.2e-21 Score=155.75 Aligned_cols=113 Identities=13% Similarity=0.138 Sum_probs=95.4
Q ss_pred ccCHHHHHHHHhC-CCEEEecCC-hhhHhcCCCCCeEEcCcccccC---CCCCCCHHHHHHHHhc--cCCCCcEEEEcCC
Q 029759 74 SVPVRVAHELLQA-GHRYLDVRT-PEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQS 146 (188)
Q Consensus 74 ~i~~~~~~~~l~~-~~~iIDvR~-~~ef~~ghIpgAinip~~~~~~---~~~~~~~~~l~~~~~~--l~~~~~ivv~C~s 146 (188)
.|+++++.+++++ +.+|||+|+ +++|..||||||+|+|+..... .+.+.+.+.+...+.. ++++++||+||.+
T Consensus 7 ~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~~ 86 (277)
T 3aay_A 7 LVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGN 86 (277)
T ss_dssp EECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEECSG
T ss_pred eEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCC
Confidence 5899999998875 489999998 8999999999999999864332 2455666777777666 6789999999998
Q ss_pred Ch-HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCccccccc
Q 029759 147 GK-RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEKL 186 (188)
Q Consensus 147 G~-~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~~ 186 (188)
|. +|.++++.|+.+||++| +|.||+.+|..+++|+++...
T Consensus 87 g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 87 NNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp GGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred CCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 74 78999999999999988 799999999999999987543
No 38
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.84 E-value=6.7e-21 Score=142.44 Aligned_cols=102 Identities=18% Similarity=0.249 Sum_probs=83.9
Q ss_pred CcccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHh---cc-CCCCcE
Q 029759 72 PTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RF-RKHDEI 140 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~-------~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~---~l-~~~~~i 140 (188)
...|+++++.+++++ +.+|||||++.||..||||||+|+|+. +....... .+ ++++++
T Consensus 22 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~-----------~~~~~~~~~~~~~~~~~~~i 90 (161)
T 1c25_A 22 LKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHME-----------EEVEDFLLKKPIVPTDGKRV 90 (161)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHTTTSCCCCCTTSEE
T ss_pred cceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChh-----------HHHHHHHhhhhhccCCCCCe
Confidence 346999999999975 489999999999999999999999984 23333322 22 567886
Q ss_pred --EEEcC-CChHHHHHHHHHHH----------CCCCce-EecCcHHhhhhCCCccccc
Q 029759 141 --IVGCQ-SGKRSMMAATDLLN----------AVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 141 --vv~C~-sG~~a~~a~~~L~~----------~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
|+||. +|.+|..++..|.. +||+++ +|.||+.+|..++.|+...
T Consensus 91 vvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~ 148 (161)
T 1c25_A 91 IVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP 148 (161)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred EEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence 67899 99999999999986 499988 7999999999998887765
No 39
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.84 E-value=1.8e-20 Score=152.89 Aligned_cols=113 Identities=15% Similarity=0.063 Sum_probs=95.1
Q ss_pred cccCHHHHHHHHhC-----CCEEEecC--------ChhhHhcCCCCCeEEcCcccccC-----CCCCCCHHHHHHHHhc-
Q 029759 73 TSVPVRVAHELLQA-----GHRYLDVR--------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVSTR- 133 (188)
Q Consensus 73 ~~i~~~~~~~~l~~-----~~~iIDvR--------~~~ef~~ghIpgAinip~~~~~~-----~~~~~~~~~l~~~~~~- 133 (188)
..|+++++.+++++ +.+||||| ++.+|..||||||+|+|+..... ...+.+.+.+...+..
T Consensus 8 ~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~l 87 (296)
T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSL 87 (296)
T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 46899999999975 58999999 68999999999999999863322 1345566777776665
Q ss_pred -cCCCCcEEEEcCC--ChH-HHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 134 -FRKHDEIIVGCQS--GKR-SMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 134 -l~~~~~ivv~C~s--G~~-a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
++++++||+||.+ |.+ |.++++.|+.+||++| +|.||+.+|..+++|+++..
T Consensus 88 gi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 144 (296)
T 1rhs_A 88 GISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP 144 (296)
T ss_dssp TCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred CCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence 5788999999999 776 8899999999999998 79999999999999998763
No 40
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.84 E-value=3.5e-21 Score=156.11 Aligned_cols=112 Identities=14% Similarity=0.097 Sum_probs=94.9
Q ss_pred ccCHHHHHHHHhC-CCEEEecC-ChhhHhcCCCCCeEEcCcccccC---CCCCCCHHHHHHHHhc--cCCCCcEEEEcCC
Q 029759 74 SVPVRVAHELLQA-GHRYLDVR-TPEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQS 146 (188)
Q Consensus 74 ~i~~~~~~~~l~~-~~~iIDvR-~~~ef~~ghIpgAinip~~~~~~---~~~~~~~~~l~~~~~~--l~~~~~ivv~C~s 146 (188)
.|+++++.+++++ +.+|||+| ++++|..||||||+|+|+...+. .+.+.+.+.+...+.. ++++++||+||++
T Consensus 9 ~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~~ 88 (285)
T 1uar_A 9 LVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDK 88 (285)
T ss_dssp EECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECHH
T ss_pred eEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEECCC
Confidence 6899999998875 58999999 78999999999999999863222 3455566667776665 5789999999999
Q ss_pred Ch-HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 147 GK-RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 147 G~-~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
|. +|.++++.|+.+||++| +|.||+.+|..+++|+++..
T Consensus 89 g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~ 129 (285)
T 1uar_A 89 NNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEV 129 (285)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCC
T ss_pred CCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCC
Confidence 87 79999999999999998 79999999999999998743
No 41
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.83 E-value=2.2e-20 Score=145.78 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=84.2
Q ss_pred CcccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHh---ccC--CCCc
Q 029759 72 PTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KHDE 139 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~-------~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~---~l~--~~~~ 139 (188)
...|+++++.+++++ +++|||||++.||..||||||+|+|+. +.....+. .++ ++++
T Consensus 43 ~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~-----------~l~~~~~~~~~~l~~~~d~~ 111 (211)
T 1qb0_A 43 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLDKR 111 (211)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHTTTCCCSSTTSE
T ss_pred CCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCch-----------HHHHHhhhhhhhccccCCCC
Confidence 347999999999875 489999999999999999999999984 23332222 343 6788
Q ss_pred E--EEEcC-CChHHHHHHHHHHH----------CCCCce-EecCcHHhhhhCCCccccc
Q 029759 140 I--IVGCQ-SGKRSMMAATDLLN----------AVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 140 i--vv~C~-sG~~a~~a~~~L~~----------~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
| |+||. +|.+|..++..|.. +||++| +|.||+.+|..++.|+.+.
T Consensus 112 ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 112 VILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred eEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 7 78899 99999999999886 799988 7999999999998887553
No 42
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.83 E-value=2.9e-20 Score=152.38 Aligned_cols=116 Identities=16% Similarity=0.076 Sum_probs=95.1
Q ss_pred CCCcccCHHHHHHHHhC-----CCEEEecC---------ChhhHhcCCCCCeEEcCcccccC-----CCCCCCHHHHHHH
Q 029759 70 GVPTSVPVRVAHELLQA-----GHRYLDVR---------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEV 130 (188)
Q Consensus 70 ~~~~~i~~~~~~~~l~~-----~~~iIDvR---------~~~ef~~ghIpgAinip~~~~~~-----~~~~~~~~~l~~~ 130 (188)
.....|+++++.+++++ +.+|||+| +++||..||||||+|+|+..... .+.+.+.+.+++.
T Consensus 19 ~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~ 98 (302)
T 3olh_A 19 YFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEY 98 (302)
T ss_dssp -CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred CCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence 34457999999999975 68999999 78999999999999999864221 2445566777777
Q ss_pred Hhcc--CCCCcEEEEcCC---ChHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 131 STRF--RKHDEIIVGCQS---GKRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 131 ~~~l--~~~~~ivv~C~s---G~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
+..+ +++++||+||.+ +.+|.++++.|+.+||++| +|.||+.+|..+|+|+++..
T Consensus 99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 159 (302)
T 3olh_A 99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK 159 (302)
T ss_dssp HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence 7664 788999999964 3569999999999999998 79999999999999998863
No 43
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.83 E-value=2.2e-20 Score=141.44 Aligned_cols=102 Identities=17% Similarity=0.186 Sum_probs=80.9
Q ss_pred CcccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc---cC--CCCc
Q 029759 72 PTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---FR--KHDE 139 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~-------~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~---l~--~~~~ 139 (188)
...|+++++.+++++ +++|||||++.||..||||||+|+|+. +........ ++ ++++
T Consensus 23 ~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~-----------~l~~~~~~~~~~~~~~~~~~ 91 (175)
T 2a2k_A 23 LKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLDKR 91 (175)
T ss_dssp SCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHSSCCCC----CE
T ss_pred CceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChh-----------HHHHHhhhhhhhccccCCCC
Confidence 347999999999975 489999999999999999999999984 222322221 33 6788
Q ss_pred EEE--EcC-CChHHHHHHHHHHH----------CCCCce-EecCcHHhhhhCCCccccc
Q 029759 140 IIV--GCQ-SGKRSMMAATDLLN----------AVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 140 ivv--~C~-sG~~a~~a~~~L~~----------~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
||+ ||+ +|.+|..++..|+. +||++| +|.||+.+|..++.|+.++
T Consensus 92 ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~ 150 (175)
T 2a2k_A 92 VILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 150 (175)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred eEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCC
Confidence 855 599 89999999999985 599988 7999999999998887543
No 44
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.83 E-value=8.4e-21 Score=149.60 Aligned_cols=142 Identities=21% Similarity=0.173 Sum_probs=101.5
Q ss_pred hhh-hhcccccccCCceeEEeecCCC-c---------ccccccccccccccc----cCC--------------CcccCHH
Q 029759 28 NNR-RGLLSLTVDQQRCDNIGFISSK-I---------LSFCPKASLRGNLEA----VGV--------------PTSVPVR 78 (188)
Q Consensus 28 ~~~-~~~~~~~~~~~~~~v~~~~~~~-~---------~~~~~~~~~~~~~~~----~~~--------------~~~i~~~ 78 (188)
+.| +++..++. .+.+|+|+..+. . +++.++..++|+... .+. ...++++
T Consensus 49 ~~~~~~~~~l~~--~~~ivvyc~~g~~~s~~a~~~L~~G~~~v~~l~GGW~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~ 126 (230)
T 2eg4_A 49 GGLTELFQTLGL--RSPVVLYDEGLTSRLCRTAFFLGLGGLEVQLWTEGWEPYATEKEEPKPERTEVVAKLRRDWLLTAD 126 (230)
T ss_dssp HHHHHHHHHTTC--CSSEEEECSSSCHHHHHHHHHHHHTTCCEEEECSSCGGGCCBCSCCCCCCCCCCCCCCGGGBCCHH
T ss_pred HHHHHHHHhcCC--CCEEEEEcCCCCccHHHHHHHHHcCCceEEEeCCCCccCcccCCCCCcccccceecCCccceeCHH
Confidence 456 55555554 556667765544 1 255556565554211 000 0136677
Q ss_pred HHHHHHhCCCEEEecCChhhHhc----------CCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCCh
Q 029759 79 VAHELLQAGHRYLDVRTPEEFSA----------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (188)
Q Consensus 79 ~~~~~l~~~~~iIDvR~~~ef~~----------ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~ 148 (188)
++.+ +.+|||+|+++||.. ||||||+|+|+.+..... +.+.. ..++++++||+||++|.
T Consensus 127 e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-----e~~~~--~~~~~~~~iv~~C~~G~ 195 (230)
T 2eg4_A 127 EAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-----GLLER--LGLQPGQEVGVYCHSGA 195 (230)
T ss_dssp HHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-----THHHH--HTCCTTCEEEEECSSSH
T ss_pred HHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-----HHHHh--cCCCCCCCEEEEcCChH
Confidence 7665 689999999999998 999999999986443321 11211 13678999999999999
Q ss_pred HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccc
Q 029759 149 RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 149 ~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~ 183 (188)
+|+.++..|+.+| .++ +|.|||.+|..+++|+++
T Consensus 196 rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 196 RSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp HHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred HHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 9999999999999 888 799999999999999874
No 45
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.83 E-value=5.2e-21 Score=141.80 Aligned_cols=112 Identities=14% Similarity=0.051 Sum_probs=79.6
Q ss_pred cccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCeEEcCcccccC----CCCCCCHHHH-HHHHh--ccCCCCcEEE
Q 029759 73 TSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVG----SGMTKNLKFV-EEVST--RFRKHDEIIV 142 (188)
Q Consensus 73 ~~i~~~~~~~~l~~---~~~iIDvR~~~ef~~ghIpgAinip~~~~~~----~~~~~~~~~l-~~~~~--~l~~~~~ivv 142 (188)
..|+++++.+++++ +.+|||+|++.||..||||||+|+|+..... .+.....+.+ ..... .++++++||+
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iVv 83 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVVV 83 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEEE
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEEE
Confidence 46899999999973 4899999999999999999999999852210 0111100111 00001 1467899999
Q ss_pred EcCCChHHHHH------HHHHHH--CCCCce-EecCcHHhhhhCCCccccc
Q 029759 143 GCQSGKRSMMA------ATDLLN--AVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 143 ~C~sG~~a~~a------~~~L~~--~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
||++|.++..+ ++.|+. .||++| +|.||+.+|.....++.+.
T Consensus 84 yc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~ 134 (153)
T 2vsw_A 84 YDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEG 134 (153)
T ss_dssp ECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC
T ss_pred EeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcC
Confidence 99999887655 466663 399988 7999999998875555443
No 46
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.82 E-value=3.9e-20 Score=162.41 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=107.0
Q ss_pred CceeEEeecCCCcc----------cccccccccc-ccc---ccCC----------CcccCHHHHHHHHhC-CCEEEecCC
Q 029759 41 QRCDNIGFISSKIL----------SFCPKASLRG-NLE---AVGV----------PTSVPVRVAHELLQA-GHRYLDVRT 95 (188)
Q Consensus 41 ~~~~v~~~~~~~~~----------~~~~~~~~~~-~~~---~~~~----------~~~i~~~~~~~~l~~-~~~iIDvR~ 95 (188)
.+.+|+|+..+... ++ ++.+++| ++. ..+. ...++++++.+++++ +.+|||+|+
T Consensus 322 ~~~ivv~c~~g~rs~~aa~~L~~~G~-~v~~l~G~G~~~w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~ 400 (539)
T 1yt8_A 322 GARLVLVDDDGVRANMSASWLAQMGW-QVAVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTA 400 (539)
T ss_dssp TCEEEEECSSSSHHHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCCCCCCCCCCCCEECHHHHHHHTTSTTEEEEECSC
T ss_pred CCeEEEEeCCCCcHHHHHHHHHHcCC-eEEEecCCChHHHHHhhccccCCCCCCcCCccCHHHHHHHhcCCCeEEEEeCC
Confidence 45566665554322 66 6667777 651 2222 235899999999875 489999999
Q ss_pred hhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhh
Q 029759 96 PEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTW 174 (188)
Q Consensus 96 ~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W 174 (188)
+.||..||||||+|+|.. .+...+..++++++||+||.+|.+|..++..|+.+||+++ +|.|||.+|
T Consensus 401 ~~e~~~ghIpgA~~ip~~------------~l~~~l~~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W 468 (539)
T 1yt8_A 401 SANYAKRHIPGAAWVLRS------------QLKQALERLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAW 468 (539)
T ss_dssp HHHHHHCBCTTCEECCGG------------GHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHH
T ss_pred HHHhhcCcCCCchhCCHH------------HHHHHHHhCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHH
Confidence 999999999999999984 5666666678899999999999999999999999999988 899999999
Q ss_pred hhCCCcccccc
Q 029759 175 FLSNQLLTEEK 185 (188)
Q Consensus 175 ~~~g~p~~~~~ 185 (188)
..+|+|+++..
T Consensus 469 ~~~g~pv~~~~ 479 (539)
T 1yt8_A 469 VAAGLPTEDGE 479 (539)
T ss_dssp HHTTCCCBCSS
T ss_pred HhCCCCcccCC
Confidence 99999999853
No 47
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.81 E-value=3.4e-20 Score=135.00 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=76.4
Q ss_pred ccCHHHHHH--------HHhC-CCEEEecCChhhHhcCCCCCeEEcCcccccCC-----CCCCCHHHHHH-----HHhcc
Q 029759 74 SVPVRVAHE--------LLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEE-----VSTRF 134 (188)
Q Consensus 74 ~i~~~~~~~--------~l~~-~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~-----~~~~~~~~l~~-----~~~~l 134 (188)
.|+++++.+ ++++ +.+|||+|+++||..||||||+|+|+...... +....++.+.. .....
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 478889888 5543 48999999999999999999999998532210 11110111100 00000
Q ss_pred CCCCcEEEEcCCChHH---------HHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 135 RKHDEIIVGCQSGKRS---------MMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a---------~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
++++||+||++|.++ ..++..|...|| ++ +|.||+.+|..++.++.+..
T Consensus 82 -~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~ 140 (142)
T 2ouc_A 82 -FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS 140 (142)
T ss_dssp -HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred -CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence 268899999999875 457788999999 77 79999999999998887643
No 48
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.81 E-value=4.3e-20 Score=155.51 Aligned_cols=111 Identities=9% Similarity=-0.059 Sum_probs=93.0
Q ss_pred cccCHHHHHHHHhCCCEEEecCC--------hhhHhcCCCCCeEEcCcccccC--------CCCCCCHHHHHHHHhc--c
Q 029759 73 TSVPVRVAHELLQAGHRYLDVRT--------PEEFSAGHATGAINVPYMYRVG--------SGMTKNLKFVEEVSTR--F 134 (188)
Q Consensus 73 ~~i~~~~~~~~l~~~~~iIDvR~--------~~ef~~ghIpgAinip~~~~~~--------~~~~~~~~~l~~~~~~--l 134 (188)
..|+++++.+++++ .+|||+|+ ++||..||||||+|+|+...+. .+.+.+.+.+.+.+.. +
T Consensus 14 ~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~gi 92 (373)
T 1okg_A 14 VFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANGM 92 (373)
T ss_dssp CEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTTC
T ss_pred cEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcCC
Confidence 47999999998877 99999998 6999999999999999865232 2345566667666643 6
Q ss_pred CCCCcEEEEc-CCChHHH-HHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 135 RKHDEIIVGC-QSGKRSM-MAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 135 ~~~~~ivv~C-~sG~~a~-~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
+++++||+|| .+|.++. ++++.|+.+|| +| +|+||+.+|..+|+|+++..
T Consensus 93 ~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~ 145 (373)
T 1okg_A 93 AGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGE 145 (373)
T ss_dssp SSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSC
T ss_pred CCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCC
Confidence 7899999999 7787876 99999999999 88 79999999999999998753
No 49
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.81 E-value=8.6e-20 Score=135.47 Aligned_cols=103 Identities=16% Similarity=0.142 Sum_probs=77.9
Q ss_pred cccCHHHHHHHHhC-----CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc-CCC-CcEEEEc-
Q 029759 73 TSVPVRVAHELLQA-----GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKH-DEIIVGC- 144 (188)
Q Consensus 73 ~~i~~~~~~~~l~~-----~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l-~~~-~~ivv~C- 144 (188)
..|+++++.+++++ +.+|||+|++ ||..||||||+|+|+.... ...+......+ +++ +.||+||
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~-------~~~~~~l~~~l~~~~~~~vV~yC~ 76 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCT-------EEMYEKLAKTLFEEKKELAVFHCA 76 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCC-------HHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhh-------HHHHHHHHHHhcccCCCEEEEEcC
Confidence 36899999999876 6899999999 9999999999999985211 11222222222 134 4577789
Q ss_pred CCChHHHHHH----HHHHHCCC--Cce-EecCcHHhhhhCCCcccc
Q 029759 145 QSGKRSMMAA----TDLLNAVS--THA-NYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 145 ~sG~~a~~a~----~~L~~~G~--~~v-~l~GG~~~W~~~g~p~~~ 183 (188)
.+|.++..++ +.|...|| .++ +|.||+.+|..++.++..
T Consensus 77 ~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~ 122 (152)
T 2j6p_A 77 QSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP 122 (152)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred CCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence 7899998887 77888998 478 699999999988776654
No 50
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=142.05 Aligned_cols=96 Identities=19% Similarity=0.200 Sum_probs=77.5
Q ss_pred CcccCHHHHHHHHhC-------CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc---c--CCCC-
Q 029759 72 PTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---F--RKHD- 138 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~-------~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~---l--~~~~- 138 (188)
...|+++++.+++++ +++|||||.+.||..||||||+|+|+. +.+...+.. + ++++
T Consensus 56 ~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~-----------~~l~~~l~~~~~~~~~~~k~ 124 (216)
T 3op3_A 56 LKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQ-----------EELFNFFLKKPIVPLDTQKR 124 (216)
T ss_dssp SEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSH-----------HHHHHHHTSSCCCCSSTTSE
T ss_pred CCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChH-----------HHHHHHHhhccccccccCCC
Confidence 457999999999975 379999999999999999999999984 345444321 2 2344
Q ss_pred -cEEEEcC-CChHHHHHHHHHHHC----------CCCce-EecCcHHhhhhCC
Q 029759 139 -EIIVGCQ-SGKRSMMAATDLLNA----------VSTHA-NYPSKPLTWFLSN 178 (188)
Q Consensus 139 -~ivv~C~-sG~~a~~a~~~L~~~----------G~~~v-~l~GG~~~W~~~g 178 (188)
+||+||. +|.||..++..|... ||++| +|.||+.+|..+.
T Consensus 125 ~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~ 177 (216)
T 3op3_A 125 IIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY 177 (216)
T ss_dssp EEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred CEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence 4999999 999999999999876 89998 7999999998863
No 51
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.81 E-value=6.2e-20 Score=147.59 Aligned_cols=101 Identities=20% Similarity=0.161 Sum_probs=82.3
Q ss_pred CcccCHHHHHHHHhCC-CEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHH
Q 029759 72 PTSVPVRVAHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~-~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a 150 (188)
...++++++.++++++ .+|||+|++.||..||||||+|+|+....+ .++.+..... .+++++||+||.+|.+|
T Consensus 121 ~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~~-----~~~~l~~~l~-~~kdk~IVvyC~~G~RS 194 (265)
T 4f67_A 121 GTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFRE-----FPDYVQRNLI-DKKDKKIAMFCTGGIRC 194 (265)
T ss_dssp TCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGGG-----HHHHHHHHTG-GGTTSCEEEECSSSHHH
T ss_pred CceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHHh-----hHHHHHHhhh-hCCCCeEEEEeCCChHH
Confidence 4479999999999764 999999999999999999999999852110 1112222221 36789999999999999
Q ss_pred HHHHHHHHHCCCCce-EecCcHHhhhhCC
Q 029759 151 MMAATDLLNAVSTHA-NYPSKPLTWFLSN 178 (188)
Q Consensus 151 ~~a~~~L~~~G~~~v-~l~GG~~~W~~~g 178 (188)
..+++.|...||++| .|.||+.+|.++-
T Consensus 195 ~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~ 223 (265)
T 4f67_A 195 EKTTAYMKELGFEHVYQLHDGILNYLESI 223 (265)
T ss_dssp HHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred HHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence 999999999999998 7999999998763
No 52
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.80 E-value=2e-19 Score=157.95 Aligned_cols=100 Identities=20% Similarity=0.124 Sum_probs=87.3
Q ss_pred cccCHHHHHHHHhC--CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc--CCCCcEEEEcCCCh
Q 029759 73 TSVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGK 148 (188)
Q Consensus 73 ~~i~~~~~~~~l~~--~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l--~~~~~ivv~C~sG~ 148 (188)
..|+++++.+++++ +.+|||+|++.||..||||||+|+|+. .+...+..+ +++++||+||.+|.
T Consensus 7 ~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~------------~~~~~~~~l~~~~~~~iVvyc~~g~ 74 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLS------------RLELEIHARVPRRDTPITVYDDGEG 74 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGG------------GHHHHHHHHSCCTTSCEEEECSSSS
T ss_pred cccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhhCCCCCCeEEEEECCCC
Confidence 46899999999864 589999999999999999999999984 344433332 46899999999999
Q ss_pred HHHHHHHHHHHCCCCce-EecCcHHhhhhCCCccccc
Q 029759 149 RSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 149 ~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
+|.++++.|+.+||++| +|.||+.+|..+|+|++++
T Consensus 75 ~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~ 111 (539)
T 1yt8_A 75 LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRD 111 (539)
T ss_dssp HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCS
T ss_pred hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccC
Confidence 99999999999999999 7999999999999999765
No 53
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.79 E-value=5.1e-20 Score=136.39 Aligned_cols=103 Identities=17% Similarity=0.050 Sum_probs=76.7
Q ss_pred cccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCeEEcCccccc----CC------CCCCCHHHHHHHHhccCCCCc
Q 029759 73 TSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRV----GS------GMTKNLKFVEEVSTRFRKHDE 139 (188)
Q Consensus 73 ~~i~~~~~~~~l~~---~~~iIDvR~~~ef~~ghIpgAinip~~~~~----~~------~~~~~~~~l~~~~~~l~~~~~ 139 (188)
..|+++++.+++++ +.+|||+|++.||..||||||+|+|+.... .. ..+.+. .....+..++++++
T Consensus 16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~ 94 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRG-EDRDRFTRRCGTDT 94 (154)
T ss_dssp SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTS-HHHHHHHHSTTSSC
T ss_pred cccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCH-HHHHHHhccCCCCe
Confidence 46788888888764 589999999999999999999999986422 11 122222 22334445678899
Q ss_pred EEEEcCCChHH-------HHHHHHHHHC---CCCce-EecCcHHhhhhC
Q 029759 140 IIVGCQSGKRS-------MMAATDLLNA---VSTHA-NYPSKPLTWFLS 177 (188)
Q Consensus 140 ivv~C~sG~~a-------~~a~~~L~~~---G~~~v-~l~GG~~~W~~~ 177 (188)
||+||++|.++ ..+++.|+.+ ||+ + +|.||+.+|...
T Consensus 95 iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 95 VVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp EEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred EEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 99999998764 4456666654 999 7 799999999875
No 54
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.78 E-value=1.9e-19 Score=158.96 Aligned_cols=92 Identities=23% Similarity=0.338 Sum_probs=84.1
Q ss_pred cccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHH
Q 029759 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMM 152 (188)
Q Consensus 73 ~~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~ 152 (188)
..++++++.++++++.+|||+|+++||..||||||+|+|+ +.+...+..++++++||+||.+|.||..
T Consensus 489 ~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~------------~~l~~~~~~l~~~~~iv~~C~~g~rs~~ 556 (588)
T 3ics_A 489 DTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPL------------DELRDRLEEVPVDKDIYITCQLGMRGYV 556 (588)
T ss_dssp CEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCH------------HHHTTCGGGSCSSSCEEEECSSSHHHHH
T ss_pred ceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCH------------HHHHHHHhhCCCCCeEEEECCCCcHHHH
Confidence 3589999999998889999999999999999999999998 4666666678899999999999999999
Q ss_pred HHHHHHHCCCCce-EecCcHHhhhhC
Q 029759 153 AATDLLNAVSTHA-NYPSKPLTWFLS 177 (188)
Q Consensus 153 a~~~L~~~G~~~v-~l~GG~~~W~~~ 177 (188)
+++.|+..||+ + +|.|||.+|.+.
T Consensus 557 a~~~l~~~G~~-v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 557 AARMLMEKGYK-VKNVDGGFKLYGTV 581 (588)
T ss_dssp HHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred HHHHHHHcCCc-EEEEcchHHHHHhh
Confidence 99999999999 7 799999999876
No 55
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.77 E-value=1.3e-19 Score=136.97 Aligned_cols=105 Identities=18% Similarity=0.205 Sum_probs=76.4
Q ss_pred cccCHHHHHHHHhC--------CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc-----C--CC
Q 029759 73 TSVPVRVAHELLQA--------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-----R--KH 137 (188)
Q Consensus 73 ~~i~~~~~~~~l~~--------~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l-----~--~~ 137 (188)
..|+++++.+++++ +++|||||+ .||..||||||+|+|+.+... ....+.++...+ + .+
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~-----~~~~l~~l~~~~~~~~~~~~~~ 104 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQ-----DPEYLRELKHRLLEKQADGRGA 104 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHH-----CHHHHHHHHHHHHHHHHTSSSC
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhc-----ccccHHHHHHHHHhhcccccCC
Confidence 36999999999864 389999999 999999999999999852111 101122222211 1 13
Q ss_pred CcEEEEcCCC-hHHHHHHHHHHH----CC--CCce-EecCcHHhhhhCCCcccc
Q 029759 138 DEIIVGCQSG-KRSMMAATDLLN----AV--STHA-NYPSKPLTWFLSNQLLTE 183 (188)
Q Consensus 138 ~~ivv~C~sG-~~a~~a~~~L~~----~G--~~~v-~l~GG~~~W~~~g~p~~~ 183 (188)
++||+||.+| .|+..++.+|.. .| +.+| +|.||+.+|..++.|.+.
T Consensus 105 ~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~ 158 (169)
T 3f4a_A 105 LNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES 158 (169)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred CeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence 7999999987 888888877654 36 5677 799999999998666543
No 56
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.76 E-value=3.1e-18 Score=127.70 Aligned_cols=106 Identities=14% Similarity=0.123 Sum_probs=76.3
Q ss_pred CcccCHHHHHHHHhC---------CCEEEecCChhhHhcCCCCCeEEcCccccc-----CCCCCCCHHHHHHH--Hhcc-
Q 029759 72 PTSVPVRVAHELLQA---------GHRYLDVRTPEEFSAGHATGAINVPYMYRV-----GSGMTKNLKFVEEV--STRF- 134 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~---------~~~iIDvR~~~ef~~ghIpgAinip~~~~~-----~~~~~~~~~~l~~~--~~~l- 134 (188)
...|+++++.++++. +.+|||+|++.||..||||||+|+|+...+ ..+.....+.+... ...+
T Consensus 10 ~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (158)
T 3tg1_B 10 IKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFK 89 (158)
T ss_dssp -CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHTCCCCSSCSST
T ss_pred CcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhcCCHHHHHHHh
Confidence 346899999999872 489999999999999999999999986322 11111000000000 0001
Q ss_pred -CCCCcEEEEcCCC---------hHHHHHHHHHHHCCCCceEecCcHHhhhhC
Q 029759 135 -RKHDEIIVGCQSG---------KRSMMAATDLLNAVSTHANYPSKPLTWFLS 177 (188)
Q Consensus 135 -~~~~~ivv~C~sG---------~~a~~a~~~L~~~G~~~v~l~GG~~~W~~~ 177 (188)
.++++||+||.+| .+|..++..|...||+.++|.|||.+|...
T Consensus 90 ~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 90 RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQN 142 (158)
T ss_dssp TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTCCEEEETTHHHHHTSS
T ss_pred ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCCcEEEeCCcHHHHHHH
Confidence 2478999999999 469999999999999644899999999765
No 57
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.76 E-value=3.9e-20 Score=159.81 Aligned_cols=135 Identities=24% Similarity=0.185 Sum_probs=20.2
Q ss_pred cCCCchhh-hhcccccccCCceeEEeecCCC---------ccccccccc-ccccccccCCCcccCHHHHHHHHhC-CCEE
Q 029759 23 LCPHGNNR-RGLLSLTVDQQRCDNIGFISSK---------ILSFCPKAS-LRGNLEAVGVPTSVPVRVAHELLQA-GHRY 90 (188)
Q Consensus 23 ~~p~~~~~-~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~l~~-~~~i 90 (188)
..|....| .|...+ .+.++.+|+|+.... ..++.++.. +++.... ... .+ +.+++++ +.+|
T Consensus 318 ~ip~~~~~~~~~~~~-~~~~~~vvly~~~~~a~~a~~~L~~~G~~~v~~~l~g~~~~-~~~-~~----~~~~~~~~~~~l 390 (466)
T 3r2u_A 318 NIPYDKNFINQIGWY-LNYDQEINLIGDYHLVSKATHTLQLIGYDDIAGYQLPQSKI-QTR-SI----HSEDITGNESHI 390 (466)
T ss_dssp ECCSSTTHHHHHTTT-CCTTSCEEEESCHHHHHHHHHHHHTTTCCCEEEEECCC--------------------------
T ss_pred ECCccHHHHHHHHhc-cCCCCeEEEEECCchHHHHHHHhhhhhcccccccccCcccc-cHH-HH----HHHHHhCCCcEE
Confidence 34555567 444433 366777777765221 124444433 2222110 000 11 4555544 4899
Q ss_pred EecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecC
Q 029759 91 LDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPS 169 (188)
Q Consensus 91 IDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~G 169 (188)
||+|+++||..||||||+|+|+. .+...+..++++++||+||++|.||+.+++.|+.+||+++ +|.|
T Consensus 391 iDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~G 458 (466)
T 3r2u_A 391 LDVRNDNEWNNGHLSQAVHVPHG------------KLLETDLPFNKNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNE 458 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeCCHHHHhcCcCCCCEECCHH------------HHHHHHhhCCCCCeEEEECCCChHHHHHHHHHHHcCCCCEEEecC
Confidence 99999999999999999999984 4555666688899999999999999999999999999988 7999
Q ss_pred cHHhhhh
Q 029759 170 KPLTWFL 176 (188)
Q Consensus 170 G~~~W~~ 176 (188)
||.+|.+
T Consensus 459 G~~~W~~ 465 (466)
T 3r2u_A 459 GYKDIQL 465 (466)
T ss_dssp -------
T ss_pred hHHHHhh
Confidence 9999974
No 58
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.74 E-value=6.6e-19 Score=154.53 Aligned_cols=90 Identities=28% Similarity=0.349 Sum_probs=77.1
Q ss_pred cCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHHHHH
Q 029759 75 VPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAA 154 (188)
Q Consensus 75 i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~ 154 (188)
++++++.++ .++.+|||+|+++||..+|||||+|+|+. .+...+..++++++||+||.+|.||..++
T Consensus 475 i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga~~ip~~------------~l~~~~~~~~~~~~iv~~c~~g~rs~~a~ 541 (565)
T 3ntd_A 475 IHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGAVNIPVD------------ELRDRMHELPKDKEIIIFSQVGLRGNVAY 541 (565)
T ss_dssp ECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTCEECCGG------------GTTTSGGGSCTTSEEEEECSSSHHHHHHH
T ss_pred eeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCcEECCHH------------HHHHHHhhcCCcCeEEEEeCCchHHHHHH
Confidence 566665555 44589999999999999999999999984 44445556889999999999999999999
Q ss_pred HHHHHCCCCce-EecCcHHhhhhCC
Q 029759 155 TDLLNAVSTHA-NYPSKPLTWFLSN 178 (188)
Q Consensus 155 ~~L~~~G~~~v-~l~GG~~~W~~~g 178 (188)
+.|+..|| ++ +|.||+.+|..+|
T Consensus 542 ~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 542 RQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999999 87 7999999998764
No 59
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.73 E-value=2.2e-18 Score=135.73 Aligned_cols=92 Identities=14% Similarity=0.055 Sum_probs=72.4
Q ss_pred CCEEEecCChhhHhcCCCCCeEEcCcc--cccCC---CCCCCHHHHHHHHhccCCCCcEEEEcCCCh-HHHHHHHHHHHC
Q 029759 87 GHRYLDVRTPEEFSAGHATGAINVPYM--YRVGS---GMTKNLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMAATDLLNA 160 (188)
Q Consensus 87 ~~~iIDvR~~~ef~~ghIpgAinip~~--~~~~~---~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~-~a~~a~~~L~~~ 160 (188)
+.+|||+|++++|..||||||+|+|+. +.... +++.+.+.+...+..++.+++||+||.+|. +|.++++.|+ +
T Consensus 6 ~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~-~ 84 (230)
T 2eg4_A 6 DAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLG-L 84 (230)
T ss_dssp TCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHH-H
T ss_pred CEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHH-c
Confidence 489999999999999999999999985 32210 111223456666666666899999999988 9999999999 9
Q ss_pred CCCce-EecCcHHhhhhCCCccccc
Q 029759 161 VSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 161 G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
||+++ +|+|| |.. +|+++.
T Consensus 85 G~~~v~~l~GG---W~~--~p~~~~ 104 (230)
T 2eg4_A 85 GGLEVQLWTEG---WEP--YATEKE 104 (230)
T ss_dssp TTCCEEEECSS---CGG--GCCBCS
T ss_pred CCceEEEeCCC---Ccc--CcccCC
Confidence 99998 79999 866 777553
No 60
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.70 E-value=1.3e-17 Score=144.11 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=83.3
Q ss_pred CcccCHHHHHHHHhCCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCChHHH
Q 029759 72 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~~a~ 151 (188)
+..++++++.++++++ +|||+|++++|..||||||+|+|+. ..+.+...+..+++++||+||++|. +.
T Consensus 272 ~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA~~i~~~----------~~~~~~~~~l~~~~~~vvvy~~~~~-~~ 339 (474)
T 3tp9_A 272 RVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGSLNIPWN----------KSFVTWAGWLLPADRPIHLLAADAI-AP 339 (474)
T ss_dssp ECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTCEECCSS----------TTHHHHHHHHCCSSSCEEEECCTTT-HH
T ss_pred CceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCeEEECcc----------hHHHHHHHhcCCCCCeEEEEECCCc-HH
Confidence 4479999999999887 9999999999999999999999984 1233333333467899999999876 66
Q ss_pred HHHHHHHHCCCCce-EecCcHHhhhhCCCccccc
Q 029759 152 MAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEE 184 (188)
Q Consensus 152 ~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~ 184 (188)
++++.|+.+||+++ .|.+|+.+|..++.++...
T Consensus 340 ~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~ 373 (474)
T 3tp9_A 340 DVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASY 373 (474)
T ss_dssp HHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECC
T ss_pred HHHHHHHHcCCcceEEecCcHHHHHhcccccccc
Confidence 79999999999998 5566999999988887654
No 61
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.68 E-value=1.6e-16 Score=118.35 Aligned_cols=110 Identities=8% Similarity=0.114 Sum_probs=75.0
Q ss_pred CcccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHH--------HHHHhccCCCCcE
Q 029759 72 PTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV--------EEVSTRFRKHDEI 140 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~---~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l--------~~~~~~l~~~~~i 140 (188)
...|+++++.+++++ +.+|||||+++||+.||||||+|||+.. +..+. ..+.+ ...+....+.+.|
T Consensus 14 ~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~-~~~~~--~~~~l~~~lp~~~~~~~~~~~~~~~V 90 (157)
T 1whb_A 14 KGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEA-ISPGV--TASWIEAHLPDDSKDTWKKRGNVEYV 90 (157)
T ss_dssp CSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSS-CCTTC--CHHHHHHSCCTTHHHHHHGGGTSSEE
T ss_pred CCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHH-ccCCC--cHHHHHHHCChHHHHHHHhcCCCCEE
Confidence 346899999999864 5899999999999999999999999853 22111 01111 1222222234559
Q ss_pred EEEcCCChH----HHHHHHHHHH----C----CCCc-e-EecCcHHhhhhCCCcccccc
Q 029759 141 IVGCQSGKR----SMMAATDLLN----A----VSTH-A-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 141 vv~C~sG~~----a~~a~~~L~~----~----G~~~-v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
|+||.++.+ +..+++.|.. . ||.+ | +|.||+.+|... +|...+.
T Consensus 91 Vvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~ 148 (157)
T 1whb_A 91 VLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN 148 (157)
T ss_dssp EEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSC
T ss_pred EEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCC
Confidence 999987743 3556666662 2 4543 6 799999999985 7776654
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.67 E-value=1.7e-16 Score=118.28 Aligned_cols=110 Identities=8% Similarity=0.068 Sum_probs=74.5
Q ss_pred cccCHHHHHHHHhC---CCEEEecCChhhHhcCCCCCeEEcCcccccCCCC-------CCCHHHHHHHHhccCCCCcEEE
Q 029759 73 TSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGM-------TKNLKFVEEVSTRFRKHDEIIV 142 (188)
Q Consensus 73 ~~i~~~~~~~~l~~---~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~-------~~~~~~l~~~~~~l~~~~~ivv 142 (188)
..|+++++.+++++ +.+|||||+++||+.||||||+|||+.. +..+. ..+ +.....+....+.+.||+
T Consensus 20 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~-l~~~~~~~~l~~~lp-~~~~~l~~~~~~~~~VVv 97 (157)
T 2gwf_A 20 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEA-ISPGVTASWIEAHLP-DDSKDTWKKRGNVEYVVL 97 (157)
T ss_dssp CEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGG-CCTTCCHHHHHHTSC-HHHHHHHHTTTTSSEEEE
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHH-cCCCCcHHHHHHHcC-HHHHHHHHhcCCCCEEEE
Confidence 46999999999874 5899999999999999999999999853 22211 011 112223333334456899
Q ss_pred EcCCChH----HHHHHHHHH----HC----CCCc-e-EecCcHHhhhhCCCcccccc
Q 029759 143 GCQSGKR----SMMAATDLL----NA----VSTH-A-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 143 ~C~sG~~----a~~a~~~L~----~~----G~~~-v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
||.+|.+ +..+++.|. .. |+.+ | +|.||+.+|... +|.....
T Consensus 98 y~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~ 153 (157)
T 2gwf_A 98 LDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN 153 (157)
T ss_dssp ECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBSC
T ss_pred EcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcCC
Confidence 9987743 344555554 32 4543 6 799999999884 7776544
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.66 E-value=4.9e-16 Score=128.49 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=91.0
Q ss_pred cccCHHHHHHHHhCC----CEEEecC--------C-hhhH-hcCCCCCeEEcCcccccC-----CCCCCCHHHHHHHHhc
Q 029759 73 TSVPVRVAHELLQAG----HRYLDVR--------T-PEEF-SAGHATGAINVPYMYRVG-----SGMTKNLKFVEEVSTR 133 (188)
Q Consensus 73 ~~i~~~~~~~~l~~~----~~iIDvR--------~-~~ef-~~ghIpgAinip~~~~~~-----~~~~~~~~~l~~~~~~ 133 (188)
..|+++++.++++.+ +++||++ . ..|| ++||||||++++++...+ ..++.+++.+++.+..
T Consensus 28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~~ 107 (327)
T 3utn_X 28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSN 107 (327)
T ss_dssp EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHHH
T ss_pred cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHHH
Confidence 369999999999642 7899986 2 3466 689999999999864322 2567788888888877
Q ss_pred --cCCCCcEEEEcCCC-hHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCcccccc
Q 029759 134 --FRKHDEIIVGCQSG-KRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLTEEK 185 (188)
Q Consensus 134 --l~~~~~ivv~C~sG-~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~~~~ 185 (188)
|+++++||+|.+.+ ..|.+++|.|+.+|+++| +|+|| .+|.++|+|++++.
T Consensus 108 lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~ 162 (327)
T 3utn_X 108 LGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSK 162 (327)
T ss_dssp TTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCC
T ss_pred cCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCC
Confidence 68899999999875 568999999999999999 67765 99999999998753
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.40 E-value=5.7e-13 Score=114.92 Aligned_cols=78 Identities=19% Similarity=0.144 Sum_probs=60.6
Q ss_pred CCCEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHh-ccCCCCcEEEEcCCChHHHHHHHHHHHCCCCc
Q 029759 86 AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST-RFRKHDEIIVGCQSGKRSMMAATDLLNAVSTH 164 (188)
Q Consensus 86 ~~~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~-~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~ 164 (188)
++.+|||+|++.+|..||||||+|+|+. ..+..... .++++++||+||+ +.++.++++.|..+||++
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~-----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~ 362 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYD-----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYDD 362 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSS-----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCCC
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCcc-----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhccc
Confidence 3479999999999999999999999984 23333333 3678899999999 568999999999999998
Q ss_pred e--EecCcHHhhh
Q 029759 165 A--NYPSKPLTWF 175 (188)
Q Consensus 165 v--~l~GG~~~W~ 175 (188)
+ ++.|++..|.
T Consensus 363 v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 363 IAGYQLPQSKIQT 375 (466)
T ss_dssp EEEEECCC-----
T ss_pred ccccccCcccccH
Confidence 8 4777665554
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.18 E-value=6.6e-06 Score=60.40 Aligned_cols=84 Identities=15% Similarity=0.119 Sum_probs=54.4
Q ss_pred cCHHHHHHHHhCC-CEEEecCChhh------------HhcC-CCCCeEEcCcccccCCCCCCCHHHHHHHHhcc-CCCCc
Q 029759 75 VPVRVAHELLQAG-HRYLDVRTPEE------------FSAG-HATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDE 139 (188)
Q Consensus 75 i~~~~~~~~l~~~-~~iIDvR~~~e------------f~~g-hIpgAinip~~~~~~~~~~~~~~~l~~~~~~l-~~~~~ 139 (188)
++++++..+.+.+ ..|||+|++.| |..+ +|+|.+|+|+.. + ..+.+.+......+ ..+.+
T Consensus 30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~----~-~~~~~~~~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTA----R-DIQKHDVETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCT----T-TCCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCC----C-CCCHHHHHHHHHHHHhCCCC
Confidence 4566666665556 78999998765 3344 599999999852 1 22344555444434 34789
Q ss_pred EEEEcCCChHHHHHHHH-HHHCCCC
Q 029759 140 IIVGCQSGKRSMMAATD-LLNAVST 163 (188)
Q Consensus 140 ivv~C~sG~~a~~a~~~-L~~~G~~ 163 (188)
|+++|.+|.|+..++.. |...|.+
T Consensus 105 VlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC
Confidence 99999999987743332 3445654
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=93.89 E-value=0.32 Score=34.13 Aligned_cols=84 Identities=12% Similarity=0.037 Sum_probs=49.0
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhHhcCCCCC--eEEcCcccccCCCCCCCHHHHHHHHhc----cCCCCcEEEEcCCCh
Q 029759 76 PVRVAHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK 148 (188)
Q Consensus 76 ~~~~~~~~l~~~-~~iIDvR~~~ef~~ghIpg--Ainip~~~~~~~~~~~~~~~l~~~~~~----l~~~~~ivv~C~sG~ 148 (188)
+++++..+.+.+ ..|||+|+..+......+| -+++|+. +....+.+.+...... +..+.+++|+|..|.
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~----d~~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~ 99 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIP----DFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGF 99 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCC----TTSCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecC----CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 355666665666 7999999976544333444 3456653 2223344444444333 245689999999985
Q ss_pred -HHH-HHHH-HHHHCCCC
Q 029759 149 -RSM-MAAT-DLLNAVST 163 (188)
Q Consensus 149 -~a~-~a~~-~L~~~G~~ 163 (188)
|+. .++. .+...|++
T Consensus 100 ~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 100 GRTGTMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 655 3333 34446664
No 67
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=92.53 E-value=0.35 Score=34.18 Aligned_cols=86 Identities=8% Similarity=-0.043 Sum_probs=46.3
Q ss_pred HHHHHHHHhCC-CEEEecCChhhHhc-------CCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc-C-CCCcEEEEcCC
Q 029759 77 VRVAHELLQAG-HRYLDVRTPEEFSA-------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-R-KHDEIIVGCQS 146 (188)
Q Consensus 77 ~~~~~~~l~~~-~~iIDvR~~~ef~~-------ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l-~-~~~~ivv~C~s 146 (188)
++++..+.+.+ ..|||.|+..+... ..| .-+++|..+..........+.+.+.+..+ + .+.+|+++|..
T Consensus 23 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi-~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~a 101 (151)
T 1xri_A 23 SANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKR 101 (151)
T ss_dssp HHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTC-EEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSS
T ss_pred ccCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCC-eEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCC
Confidence 34444443445 78999998654321 112 23667763211111112334555544443 2 46899999999
Q ss_pred Ch-HHH-HHHHHHHHCCCC
Q 029759 147 GK-RSM-MAATDLLNAVST 163 (188)
Q Consensus 147 G~-~a~-~a~~~L~~~G~~ 163 (188)
|. |+. .++..|...|++
T Consensus 102 G~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 102 GKHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSSHHHHHHHHHHHHTTBC
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 84 654 455556667764
No 68
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=91.67 E-value=0.83 Score=31.85 Aligned_cols=84 Identities=12% Similarity=0.038 Sum_probs=46.8
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhHhcCCCC--CeEEcCcccccCCCCCCCHHHHHHHHhc----cCCCCcEEEEcCCCh
Q 029759 76 PVRVAHELLQAG-HRYLDVRTPEEFSAGHAT--GAINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK 148 (188)
Q Consensus 76 ~~~~~~~~l~~~-~~iIDvR~~~ef~~ghIp--gAinip~~~~~~~~~~~~~~~l~~~~~~----l~~~~~ivv~C~sG~ 148 (188)
.++++..+.+.+ ..|||+|+..++....++ +-+++|+. +....+.+.+...... +..+.+|+|+|..|.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~----d~~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~ 100 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIP----DFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGF 100 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCC----TTCCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCC----CCCCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 455555555556 799999987654432232 34667763 2222333444433332 235789999999883
Q ss_pred -HHH-HHHHHHHHC-CCC
Q 029759 149 -RSM-MAATDLLNA-VST 163 (188)
Q Consensus 149 -~a~-~a~~~L~~~-G~~ 163 (188)
|+. .++..|... |.+
T Consensus 101 ~Rsg~~~~~~l~~~~~~~ 118 (151)
T 2img_A 101 GRTGTMLACYLVKERGLA 118 (151)
T ss_dssp SHHHHHHHHHHHHHHCCC
T ss_pred ChHHHHHHHHHHHHhCcC
Confidence 544 344444433 654
No 69
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=91.43 E-value=1.5 Score=35.03 Aligned_cols=100 Identities=15% Similarity=0.163 Sum_probs=57.6
Q ss_pred ccccccCCCcccCHHHHHHHHhCC-CEEEecCChhhHhcC----CCCCe--EEcCcccccC-CC--------C----CC-
Q 029759 64 GNLEAVGVPTSVPVRVAHELLQAG-HRYLDVRTPEEFSAG----HATGA--INVPYMYRVG-SG--------M----TK- 122 (188)
Q Consensus 64 ~~~~~~~~~~~i~~~~~~~~l~~~-~~iIDvR~~~ef~~g----hIpgA--inip~~~~~~-~~--------~----~~- 122 (188)
+.+-..+.+..++++++..+.+-+ ..|||.|++.|.... ..+|. +++|+..... .. . +.
T Consensus 45 G~lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~~~~~~~~~~~p~~~~~~~~~~~ 124 (296)
T 1ywf_A 45 GRLFRSSELSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTN 124 (296)
T ss_dssp TSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCCSCC-------------------
T ss_pred cceeccCCcccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCccccccccccccchhhHHHHHhhh
Confidence 333333444457788877766556 799999998875422 23453 5677542211 00 0 00
Q ss_pred --------C--------------------------HHHHHHHHhccCCCCcEEEEcCCC--hHHHHHHHHHHHCCCC
Q 029759 123 --------N--------------------------LKFVEEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLNAVST 163 (188)
Q Consensus 123 --------~--------------------------~~~l~~~~~~l~~~~~ivv~C~sG--~~a~~a~~~L~~~G~~ 163 (188)
+ ...+...+..+..+.|++|+|..| -+...++..|..+|.+
T Consensus 125 ~~~~g~~~~~~~~~~~~~~~~m~~~Y~~~~~~~~~~~~~~~~l~~l~~~~pvl~HC~aGkDRTG~~~alll~~~g~~ 201 (296)
T 1ywf_A 125 DGSNGESGESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAAGRPVLTHCFAGKDRTGFVVALVLEAVGLD 201 (296)
T ss_dssp ------------CCCHHHHHHHHHHHHHGGGSTTHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHTTCC
T ss_pred cccccccchhhhcccchHHHHHHHHHHHHHhcchhHHHHHHHHHHhccCCCEEEECCCCCccccHHHHHHHHHcCCC
Confidence 0 012333344332378999999987 3456677888889986
No 70
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=91.31 E-value=0.025 Score=41.87 Aligned_cols=21 Identities=19% Similarity=0.494 Sum_probs=19.6
Q ss_pred EEEecCChhhHhcCCCCCeEEcCcc
Q 029759 89 RYLDVRTPEEFSAGHATGAINVPYM 113 (188)
Q Consensus 89 ~iIDvR~~~ef~~ghIpgAinip~~ 113 (188)
++||||.++||+ |||+|+|..
T Consensus 123 ~liDvRe~~E~~----pgA~~iprg 143 (168)
T 1v8c_A 123 AVVRFREVEPLK----VGSLSIPQL 143 (168)
T ss_dssp EEEEEEEEEEEE----ETTEEEEEE
T ss_pred EEEECCChhhcC----CCCEEcChh
Confidence 899999999999 999999964
No 71
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=88.79 E-value=0.69 Score=32.41 Aligned_cols=80 Identities=15% Similarity=0.111 Sum_probs=39.9
Q ss_pred HHHHhCC-CEEEecCChhhHhcCCCCC---eEEcCcccccCCCCCCC-HHHHHHHHhccCCCCcEEEEcCCC-hHHHH--
Q 029759 81 HELLQAG-HRYLDVRTPEEFSAGHATG---AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM-- 152 (188)
Q Consensus 81 ~~~l~~~-~~iIDvR~~~ef~~ghIpg---Ainip~~~~~~~~~~~~-~~~l~~~~~~l~~~~~ivv~C~sG-~~a~~-- 152 (188)
..+.+.+ ..|||+|+..+ ...|+ -+++|..+......... .+.++........+.+|+++|..| .||..
T Consensus 23 ~~L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~v 99 (145)
T 2nt2_A 23 EDLQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTV 99 (145)
T ss_dssp HHHHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHH
T ss_pred HHHHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHH
Confidence 3333455 68999997532 11222 35677642211111110 011111111123568999999998 67643
Q ss_pred HHHHHHHCCCC
Q 029759 153 AATDLLNAVST 163 (188)
Q Consensus 153 a~~~L~~~G~~ 163 (188)
+++.+...|++
T Consensus 100 ~ayLm~~~~~~ 110 (145)
T 2nt2_A 100 IAYAMKEYGWN 110 (145)
T ss_dssp HHHHHHHHCCC
T ss_pred HHHHHHHhCCC
Confidence 45556656654
No 72
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=88.24 E-value=0.74 Score=33.04 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=39.5
Q ss_pred hCC-CEEEecCChhhHhcCCCCC--eEEcCcccccCCCCCCCHHHHHHHHhc----cCCCCcEEEEcCCC-hHHHH--HH
Q 029759 85 QAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSG-KRSMM--AA 154 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef~~ghIpg--Ainip~~~~~~~~~~~~~~~l~~~~~~----l~~~~~ivv~C~sG-~~a~~--a~ 154 (188)
+.+ ..|||+|...+.. ...| -+++|+.+... ....+.+...... +..+.+|+++|..| .|+.. ++
T Consensus 35 ~~gI~~Vi~l~~~~~~~--~~~~~~~~~ip~~D~~~---~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~a 109 (164)
T 2hcm_A 35 RAGITLCVNVSRQQPGP--RAPGVAELRVPVFDDPA---EDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTA 109 (164)
T ss_dssp HTTEEEEEECSSSCCCC--CCTTCEEEECCCCSCTT---SCCHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHHHHHH
T ss_pred HCCCeEEEEcCCCCCCC--CCCCCEEEEEeCcCCCC---chHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHH
Confidence 445 6899999865321 1122 35666532111 1111222222221 23578999999998 56653 34
Q ss_pred HHHHHCCCC
Q 029759 155 TDLLNAVST 163 (188)
Q Consensus 155 ~~L~~~G~~ 163 (188)
..+...|++
T Consensus 110 yLm~~~~~~ 118 (164)
T 2hcm_A 110 YLMRHRGHS 118 (164)
T ss_dssp HHHHHSCCC
T ss_pred HHHHHhCCC
Confidence 566667764
No 73
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=87.79 E-value=1.7 Score=32.60 Aligned_cols=83 Identities=22% Similarity=0.257 Sum_probs=43.9
Q ss_pred HHHHHHHHhCC-CEEEecCChhhHhcCCCC---------C--eEEcCcccccCCCCCCCHHHHHHHHhc----cCCCCcE
Q 029759 77 VRVAHELLQAG-HRYLDVRTPEEFSAGHAT---------G--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEI 140 (188)
Q Consensus 77 ~~~~~~~l~~~-~~iIDvR~~~ef~~ghIp---------g--Ainip~~~~~~~~~~~~~~~l~~~~~~----l~~~~~i 140 (188)
.+++..+.+.+ ..|||+|+..|...-.++ | -+++|+. +....+.+.+...... +..+.+|
T Consensus 61 ~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~----d~~~p~~~~~~~~~~~i~~~~~~~~~V 136 (212)
T 1fpz_A 61 QKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIA----DGGTPDIASCCEIMEELTTCLKNYRKT 136 (212)
T ss_dssp HHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCC----TTCCCCHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCC----CCCCCCHHHHHHHHHHHHHHHhCCCCE
Confidence 44444444445 799999998654321111 2 3556653 2222233333333332 2357899
Q ss_pred EEEcCCCh-HH-HHHHHHHHH--CCCC
Q 029759 141 IVGCQSGK-RS-MMAATDLLN--AVST 163 (188)
Q Consensus 141 vv~C~sG~-~a-~~a~~~L~~--~G~~ 163 (188)
+|+|..|. |+ ..++..|.. .|.+
T Consensus 137 lVHC~aG~gRTg~~~a~~L~~~~~g~~ 163 (212)
T 1fpz_A 137 LIHSYGGLGRSCLVAACLLLYLSDTIS 163 (212)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHCSSCC
T ss_pred EEECCCCCCHHHHHHHHHHHHhccCCC
Confidence 99999884 44 344455544 3654
No 74
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=86.99 E-value=1.2 Score=31.72 Aligned_cols=76 Identities=9% Similarity=0.045 Sum_probs=37.8
Q ss_pred hCC-CEEEecCChhhHhcCCCCC--eEEcCcccccCCCCCCC-HHHHHHHHhccCCCCcEEEEcCCC-hHHHH--HHHHH
Q 029759 85 QAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--AATDL 157 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef~~ghIpg--Ainip~~~~~~~~~~~~-~~~l~~~~~~l~~~~~ivv~C~sG-~~a~~--a~~~L 157 (188)
+.+ ..|||+|+..+.. ..| -+++|+.+......... .+.++.....+..+.+|+++|..| .|+.. ++..+
T Consensus 31 ~~gI~~Vi~l~~~~~~~---~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~aylm 107 (160)
T 1yz4_A 31 RNKITHIISIHESPQPL---LQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVM 107 (160)
T ss_dssp HTTCCEEEEECSSCCCC---CTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHHHHHH
T ss_pred HCCCeEEEEccCCCCCc---cCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHHHHHH
Confidence 345 6899999764321 122 35666542211111101 111111111123568999999998 56653 34445
Q ss_pred HHCCCC
Q 029759 158 LNAVST 163 (188)
Q Consensus 158 ~~~G~~ 163 (188)
...|.+
T Consensus 108 ~~~~~~ 113 (160)
T 1yz4_A 108 TVTGLG 113 (160)
T ss_dssp HHHCCC
T ss_pred HHcCCC
Confidence 556654
No 75
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=86.92 E-value=5.9 Score=27.78 Aligned_cols=88 Identities=17% Similarity=0.205 Sum_probs=45.5
Q ss_pred CCcccCHHHHHHHHh-CC-CEEEecCChh----hHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc-------c---
Q 029759 71 VPTSVPVRVAHELLQ-AG-HRYLDVRTPE----EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR-------F--- 134 (188)
Q Consensus 71 ~~~~i~~~~~~~~l~-~~-~~iIDvR~~~----ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~-------l--- 134 (188)
.|..-+.++..+++. .+ -.|||++.+. .+...+| .-+++|+. ++...+.+.+...... +
T Consensus 30 ~P~~~t~~~~~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~p~~----d~~~p~~~~~~~~~~~i~~~~~~~~~~ 104 (167)
T 3s4o_A 30 APSPSNLPTYIKELQHRGVRHLVRVCGPTYDATLVKSRGI-DVHSWPFD----DGAPPTRAVLDSWLKLLDTELARQQED 104 (167)
T ss_dssp CCCGGGHHHHHHHHHTTTEEEEEECSCCCSCTHHHHTTTC-EEEECCCC----TTCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCchhhHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHCCC-eEEEeccC----CCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 344445555555554 45 7899999752 2222222 23466653 2222333333322221 1
Q ss_pred --CCCCcEEEEcCCCh-HH-HHHHHHHHHC-CCC
Q 029759 135 --RKHDEIIVGCQSGK-RS-MMAATDLLNA-VST 163 (188)
Q Consensus 135 --~~~~~ivv~C~sG~-~a-~~a~~~L~~~-G~~ 163 (188)
+++.+|+|+|..|. |+ ..++..|... |.+
T Consensus 105 ~~~~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 105 PSVPPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp TTCCCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred cccCCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 23789999999873 44 4455555554 654
No 76
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=86.79 E-value=2.3 Score=29.53 Aligned_cols=78 Identities=17% Similarity=0.099 Sum_probs=38.5
Q ss_pred hCC-CEEEecCChhhH-hcCCCCCeEEcCcccccCCCCCCCHHHHHHHHh-ccCCCCcEEEEcCCCh-HHH-H-HHHHHH
Q 029759 85 QAG-HRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVST-RFRKHDEIIVGCQSGK-RSM-M-AATDLL 158 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef-~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~-~l~~~~~ivv~C~sG~-~a~-~-a~~~L~ 158 (188)
+.+ ..|||++..... ....+ .-.++|+.+.........-+..-+... ....+.+|+|+|..|. ||. . ++..+.
T Consensus 27 ~~gI~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~ 105 (144)
T 3ezz_A 27 ALGITALLNVSSDCPNHFEGHY-QYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMM 105 (144)
T ss_dssp HTTCCEEEECSSSCCCTTTTTS-EEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred HCCCeEEEEccCCCCccCCCCc-eEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHHHHHH
Confidence 445 789999974211 11111 235677643222221121122222222 2345689999999984 554 3 344445
Q ss_pred HCCCC
Q 029759 159 NAVST 163 (188)
Q Consensus 159 ~~G~~ 163 (188)
..|++
T Consensus 106 ~~~~~ 110 (144)
T 3ezz_A 106 KKRVR 110 (144)
T ss_dssp HHTCC
T ss_pred HcCCC
Confidence 56654
No 77
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=86.32 E-value=5.2 Score=29.22 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=46.3
Q ss_pred ccCHHHHHHHHhC-C-CEEEecCChhh----HhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc------CCCCcEE
Q 029759 74 SVPVRVAHELLQA-G-HRYLDVRTPEE----FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------RKHDEII 141 (188)
Q Consensus 74 ~i~~~~~~~~l~~-~-~~iIDvR~~~e----f~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l------~~~~~iv 141 (188)
..+.++..+++.+ + ..|||++...+ +..-+| .-+++|+. ++...+.+.+......+ .++.+|+
T Consensus 47 ~~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~pi~----d~~~~~~~~~~~~~~~i~~~~~~~~~~~Vl 121 (189)
T 3rz2_A 47 NATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFD----DGAPPSNQIVDDWLSLVKIKFREEPGCCIA 121 (189)
T ss_dssp TTTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC-EEEECCCC----SSSCCCSHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc-EEEEecCC----CCCCCCHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 3455666666654 4 78999997532 222222 23455542 23333334443333322 4668999
Q ss_pred EEcCCCh-HH-HHHHHHHHHCCCC
Q 029759 142 VGCQSGK-RS-MMAATDLLNAVST 163 (188)
Q Consensus 142 v~C~sG~-~a-~~a~~~L~~~G~~ 163 (188)
|.|..|. |+ ..++..|...|++
T Consensus 122 VHC~aG~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 122 VHCVAGLGRAPVLVALALIEGGMK 145 (189)
T ss_dssp EECSSSSTTHHHHHHHHHHTTTCC
T ss_pred EECCCCCCHHHHHHHHHHHHcCCC
Confidence 9999873 44 4455555556654
No 78
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=86.05 E-value=1.5 Score=31.46 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=38.1
Q ss_pred hCC-CEEEecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc-cCCCCcEEEEcCCC-hHHHH--HHHHHHH
Q 029759 85 QAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR-FRKHDEIIVGCQSG-KRSMM--AATDLLN 159 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~-l~~~~~ivv~C~sG-~~a~~--a~~~L~~ 159 (188)
+.+ ..|||+|...+-...++ .-+++|..+.........-...-+.+.. ...+.+|+|+|..| .||.. ++..+..
T Consensus 30 ~~gI~~Vi~l~~~~~~~~~~i-~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 30 KNKVTHILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HTTEEEEEECSTTCCCCSTTC-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HCCCcEEEEecCCCCCCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 345 68999998643211111 2356665422111111100111111111 24578999999998 56554 4455555
Q ss_pred CCCC
Q 029759 160 AVST 163 (188)
Q Consensus 160 ~G~~ 163 (188)
.|++
T Consensus 109 ~~~~ 112 (165)
T 1wrm_A 109 TDFG 112 (165)
T ss_dssp SSCC
T ss_pred cCCC
Confidence 5654
No 79
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=85.49 E-value=2.7 Score=29.45 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=40.7
Q ss_pred HHHHHhCC-CEEEecCChhhHhc--CCCC-C--eEEcCcccccCCCCCCCHHHHHHHHh-ccCCCCcEEEEcCCC-hHHH
Q 029759 80 AHELLQAG-HRYLDVRTPEEFSA--GHAT-G--AINVPYMYRVGSGMTKNLKFVEEVST-RFRKHDEIIVGCQSG-KRSM 151 (188)
Q Consensus 80 ~~~~l~~~-~~iIDvR~~~ef~~--ghIp-g--Ainip~~~~~~~~~~~~~~~l~~~~~-~l~~~~~ivv~C~sG-~~a~ 151 (188)
+..+.+.+ ..|||+|+..|-.. ...+ | -+++|..+.........-....+... .+..+.+|+++|..| .||.
T Consensus 26 ~~~L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS~ 105 (154)
T 2r0b_A 26 LPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSA 105 (154)
T ss_dssp HHHHHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHH
T ss_pred HHHHHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChHH
Confidence 33333455 78999998765321 1112 2 24566532211111110011111111 123568999999998 5665
Q ss_pred H-H-HHHHHHCCCC
Q 029759 152 M-A-ATDLLNAVST 163 (188)
Q Consensus 152 ~-a-~~~L~~~G~~ 163 (188)
. + +..+...|.+
T Consensus 106 ~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 106 AFVIAYIMETFGMK 119 (154)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 3 3 4445556654
No 80
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=84.94 E-value=2.5 Score=31.10 Aligned_cols=77 Identities=13% Similarity=0.104 Sum_probs=38.6
Q ss_pred hCC-CEEEecCChhhHhcCCCCC--eEEcCcccccCCCCCCC-HHHHHHHHhccCCCCcEEEEcCCC-hHHHH--HHHHH
Q 029759 85 QAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--AATDL 157 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef~~ghIpg--Ainip~~~~~~~~~~~~-~~~l~~~~~~l~~~~~ivv~C~sG-~~a~~--a~~~L 157 (188)
+.+ ..|||+|...+ ....+| -+++|..+......... .+.++.+-..+..+.+|+++|..| .||.. ++..+
T Consensus 43 ~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm 120 (188)
T 2esb_A 43 SNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLM 120 (188)
T ss_dssp HTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHHHH
Confidence 345 68999997432 111233 34666532211111110 111111111123578999999998 56653 45556
Q ss_pred HHCCCC
Q 029759 158 LNAVST 163 (188)
Q Consensus 158 ~~~G~~ 163 (188)
...|++
T Consensus 121 ~~~~~s 126 (188)
T 2esb_A 121 KYHAMS 126 (188)
T ss_dssp HHSCCC
T ss_pred HHcCCC
Confidence 667764
No 81
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=84.85 E-value=1.2 Score=31.41 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=43.5
Q ss_pred HHHHHH-hCC-CEEEecCChhhHhc----------CCCCCeEEcCcccccCCCCCCCHHHHHHHHhc----cCCCCcEEE
Q 029759 79 VAHELL-QAG-HRYLDVRTPEEFSA----------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIV 142 (188)
Q Consensus 79 ~~~~~l-~~~-~~iIDvR~~~ef~~----------ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~----l~~~~~ivv 142 (188)
+..+++ +.+ ..|||+|+..|... ..| .-+++|+.+. ......+.+...... +..+.+|+|
T Consensus 19 ~~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi-~~~~~p~~d~---~~~~~~~~~~~~~~~i~~~~~~~~~vlV 94 (157)
T 3rgo_A 19 MTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGV-EQLRLSTVDM---TGVPTLANLHKGVQFALKYQALGQCVYV 94 (157)
T ss_dssp GHHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTC-EEEEECCCTT---TSSCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHcCCCEEEECccccccccccCCHHHHHHCCC-eEEEecCCCC---CCCChHHHHHHHHHHHHHHHHCCCEEEE
Confidence 344443 345 68999998765421 111 2356676421 112233344433332 245689999
Q ss_pred EcCCCh-HHHHH--HHHHHHCCCC
Q 029759 143 GCQSGK-RSMMA--ATDLLNAVST 163 (188)
Q Consensus 143 ~C~sG~-~a~~a--~~~L~~~G~~ 163 (188)
+|..|. |+..+ +..+...|++
T Consensus 95 HC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 95 HCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp ESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCChHHHHHHHHHHHHcCCC
Confidence 999985 66543 3444556654
No 82
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=83.09 E-value=2.5 Score=31.21 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=38.3
Q ss_pred hCC-CEEEecCChhhHhcCCCCC--eEEcCcccccCCCCCCCHHHHHHHHhc-cCCCCcEEEEcCCC-hHHHH--HHHHH
Q 029759 85 QAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR-FRKHDEIIVGCQSG-KRSMM--AATDL 157 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef~~ghIpg--Ainip~~~~~~~~~~~~~~~l~~~~~~-l~~~~~ivv~C~sG-~~a~~--a~~~L 157 (188)
+.+ ..|||+|...+ ....+| -+++|+.+.........-....+.+.. +..+.+|+|+|..| .|+.. +++.+
T Consensus 49 ~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm 126 (190)
T 2wgp_A 49 ARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLM 126 (190)
T ss_dssp HTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHH
T ss_pred HCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHH
Confidence 445 78999997532 112233 356665422111110100111111111 23578999999998 56552 45556
Q ss_pred HHCCCC
Q 029759 158 LNAVST 163 (188)
Q Consensus 158 ~~~G~~ 163 (188)
...|++
T Consensus 127 ~~~~~s 132 (190)
T 2wgp_A 127 KFHNVC 132 (190)
T ss_dssp HHHCCC
T ss_pred HHcCCC
Confidence 666654
No 83
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=82.07 E-value=1.5 Score=30.83 Aligned_cols=28 Identities=32% Similarity=0.387 Sum_probs=20.1
Q ss_pred CCCcEEEEcCCC-hHHH-H-HHHHHHHCCCC
Q 029759 136 KHDEIIVGCQSG-KRSM-M-AATDLLNAVST 163 (188)
Q Consensus 136 ~~~~ivv~C~sG-~~a~-~-a~~~L~~~G~~ 163 (188)
.+.+|+++|..| .|+. . ++..+...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999998 6665 3 44556667764
No 84
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=81.33 E-value=2.2 Score=29.83 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=19.8
Q ss_pred CCCCcEEEEcCCC-hHHHH--HHHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSG-KRSMM--AATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG-~~a~~--a~~~L~~~G~~ 163 (188)
..+.+|+++|..| .|+.. ++..+...|.+
T Consensus 81 ~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred HcCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 3578999999998 56554 33455566764
No 85
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=80.96 E-value=4.7 Score=27.94 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=37.2
Q ss_pred hCC-CEEEecCChhhHhcCCCC--CeEEcCcccccCCCCCCCHHHHHHHHh----ccCCCCcEEEEcCCCh-HHH-H-HH
Q 029759 85 QAG-HRYLDVRTPEEFSAGHAT--GAINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSGK-RSM-M-AA 154 (188)
Q Consensus 85 ~~~-~~iIDvR~~~ef~~ghIp--gAinip~~~~~~~~~~~~~~~l~~~~~----~l~~~~~ivv~C~sG~-~a~-~-a~ 154 (188)
+.+ ..||+++...+ ..... .-+++|+.+...... .+.+..... .+..+.+|+|+|..|. ||. . ++
T Consensus 27 ~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~~~---~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~a 101 (144)
T 3s4e_A 27 KNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPETNI---LSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIG 101 (144)
T ss_dssp HTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTSCG---GGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHH
T ss_pred HcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCCch---HHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHHH
Confidence 445 78999986322 11111 235667643221111 122222222 2345678999999984 654 3 34
Q ss_pred HHHHHCCCC
Q 029759 155 TDLLNAVST 163 (188)
Q Consensus 155 ~~L~~~G~~ 163 (188)
..+...|++
T Consensus 102 yLm~~~~~~ 110 (144)
T 3s4e_A 102 FLMNSEQTS 110 (144)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHcCCC
Confidence 445556654
No 86
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=80.83 E-value=3.2 Score=30.07 Aligned_cols=27 Identities=22% Similarity=0.365 Sum_probs=18.3
Q ss_pred CCcEEEEcCCCh-HHHH--HHHHHHHCCCC
Q 029759 137 HDEIIVGCQSGK-RSMM--AATDLLNAVST 163 (188)
Q Consensus 137 ~~~ivv~C~sG~-~a~~--a~~~L~~~G~~ 163 (188)
+.+|+|+|..|. |+.. ++..+...|++
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 689999999984 6543 34444556664
No 87
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=79.29 E-value=3.8 Score=29.91 Aligned_cols=46 Identities=9% Similarity=-0.055 Sum_probs=32.0
Q ss_pred HHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 127 l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+...+....++.+++|+|++-..+...+..|...|+....+.|++.
T Consensus 36 L~~ll~~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~~ 81 (185)
T 2jgn_A 36 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 81 (185)
T ss_dssp HHHHHHHC-CCSCEEEEESCHHHHHHHHHHHHHTTCCEEEEC----
T ss_pred HHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEeCCCC
Confidence 3444444445678999999888888999999999988667888764
No 88
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=77.06 E-value=4.6 Score=30.52 Aligned_cols=29 Identities=21% Similarity=0.194 Sum_probs=19.9
Q ss_pred CCCCcEEEEcCCC-hHHH--HHHHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSG-KRSM--MAATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG-~~a~--~a~~~L~~~G~~ 163 (188)
..+.+|+|+|..| .|+. .+++.+...|++
T Consensus 81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~s 112 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQFR 112 (211)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHCCC
T ss_pred hcCCeEEEECCCCCCcHHHHHHHHHHHHcCCC
Confidence 3578999999998 5654 345556656653
No 89
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=76.13 E-value=16 Score=26.98 Aligned_cols=28 Identities=25% Similarity=0.350 Sum_probs=19.5
Q ss_pred CCCcEEEEcCCC-hHHHH--HHHHHHHCCCC
Q 029759 136 KHDEIIVGCQSG-KRSMM--AATDLLNAVST 163 (188)
Q Consensus 136 ~~~~ivv~C~sG-~~a~~--a~~~L~~~G~~ 163 (188)
.+.+|+|+|..| .||.. +++.+...|++
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 160 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENMT 160 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCCC
Confidence 568999999998 56553 34456666764
No 90
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=75.06 E-value=18 Score=24.96 Aligned_cols=89 Identities=18% Similarity=0.209 Sum_probs=46.3
Q ss_pred CCCcccCHHHHHHHHh-CC-CEEEecCChh----hHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc------CCC
Q 029759 70 GVPTSVPVRVAHELLQ-AG-HRYLDVRTPE----EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------RKH 137 (188)
Q Consensus 70 ~~~~~i~~~~~~~~l~-~~-~~iIDvR~~~----ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l------~~~ 137 (188)
..|...+.++..+++. .+ ..||++++.. .+...++ .-+++|.. ++...+.+.+......+ +++
T Consensus 22 ~~p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~-~~~~~p~~----d~~~~~~~~~~~~~~~i~~~~~~~~~ 96 (159)
T 1rxd_A 22 HNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFD----DGAPPSNQIVDDWLSLVKIKFREEPG 96 (159)
T ss_dssp CCCCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC-EEEECCC------CCCCCHHHHHHHHHHHHHHHHHSTT
T ss_pred CCCccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCC-EEEeCCCc----CCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence 3344567777555554 45 6788888642 2222222 23455532 22233334333332222 346
Q ss_pred CcEEEEcCCC-hHHH-HHHHHHHHCCCC
Q 029759 138 DEIIVGCQSG-KRSM-MAATDLLNAVST 163 (188)
Q Consensus 138 ~~ivv~C~sG-~~a~-~a~~~L~~~G~~ 163 (188)
.+|+|+|..| .|+. .++..|...|.+
T Consensus 97 ~~vlVHC~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 97 CCIAVHCVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp CEEEEECSSSSTTHHHHHHHHHHHTTCC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 8999999988 3543 455555556654
No 91
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=73.14 E-value=27 Score=26.17 Aligned_cols=29 Identities=31% Similarity=0.432 Sum_probs=19.9
Q ss_pred CCCCcEEEEcCCC-hHHHH--HHHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSG-KRSMM--AATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG-~~a~~--a~~~L~~~G~~ 163 (188)
..+.+|+|+|..| .||.. +++.+...|++
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 168 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDMT 168 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 4568999999998 56553 44456666764
No 92
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=71.67 E-value=24 Score=24.93 Aligned_cols=84 Identities=13% Similarity=0.105 Sum_probs=41.1
Q ss_pred cCHHHHHHHHhCC-CEEEecCChhh-HhcCCCC--C--eEEcCcccccCCCCCCCHHHHHHHHhc----c--CCCCcEEE
Q 029759 75 VPVRVAHELLQAG-HRYLDVRTPEE-FSAGHAT--G--AINVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIV 142 (188)
Q Consensus 75 i~~~~~~~~l~~~-~~iIDvR~~~e-f~~ghIp--g--Ainip~~~~~~~~~~~~~~~l~~~~~~----l--~~~~~ivv 142 (188)
.+++++.+. +.+ ..|||++..++ |....++ | -+++|+. +....+.+.+...... + .++.+|+|
T Consensus 44 ~~~~~ll~~-~~gi~~Vi~l~~~~~~~~~~~~~~~gi~~~~~~~~----d~~~p~~~~~~~~~~~~~~~~~~~~~~~vlV 118 (169)
T 1yn9_A 44 WTAEQIVKQ-NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVP----GQTLPPESIVQEFIDTVKEFTEKCPGMLVGV 118 (169)
T ss_dssp CCHHHHHHH-CTTEEEEEECCSCSCSCCTHHHHHTTCEEEECCCC----SSSCCCHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred CCHHHHHhh-CCCcCEEEEcCCCCCCCCHHHHHhcCCEEEEEeCC----CCCCCCHHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345555443 344 78999986432 2211110 2 2455542 2222223333222221 2 25689999
Q ss_pred EcCCC-hHHH-HHHHHHHH-CCCC
Q 029759 143 GCQSG-KRSM-MAATDLLN-AVST 163 (188)
Q Consensus 143 ~C~sG-~~a~-~a~~~L~~-~G~~ 163 (188)
+|..| .|+. .++..|.. .|++
T Consensus 119 HC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 119 HCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp ECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred ECCCCCChHHHHHHHHHHHHhCCC
Confidence 99988 3443 34444443 6764
No 93
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=70.93 E-value=12 Score=27.47 Aligned_cols=75 Identities=15% Similarity=0.238 Sum_probs=35.0
Q ss_pred CEEEecCChhhHh-cCCCCCeEEcCcccccCCCCCCCHHHHHHHHhc-cCCCCcEEEEcCCC-hHHHH-H-HHHHHHCCC
Q 029759 88 HRYLDVRTPEEFS-AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR-FRKHDEIIVGCQSG-KRSMM-A-ATDLLNAVS 162 (188)
Q Consensus 88 ~~iIDvR~~~ef~-~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~-l~~~~~ivv~C~sG-~~a~~-a-~~~L~~~G~ 162 (188)
..|||+|+..+.. ..++ .-+++|..+.........-..+.+.... ...+.+|+|+|..| .|+.. + +..+...|.
T Consensus 75 ~~Vi~l~~~~~~~~~~~~-~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~ 153 (195)
T 2q05_A 75 KYVLNLTMDKYTLPNSNI-NIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKE 153 (195)
T ss_dssp SEEEECSSSCCCCTTCCC-EEEECCCCCSSSCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred CEEEEECCCCCCcccCCc-EEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHHHhCC
Confidence 3799999865321 1111 2345665321111100000112222222 23568999999998 55443 3 333344665
Q ss_pred C
Q 029759 163 T 163 (188)
Q Consensus 163 ~ 163 (188)
+
T Consensus 154 ~ 154 (195)
T 2q05_A 154 S 154 (195)
T ss_dssp S
T ss_pred C
Confidence 5
No 94
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=69.99 E-value=19 Score=27.79 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=25.3
Q ss_pred CcEEEEcCCCh---HHHHHHHHHHHCCCCce-EecC
Q 029759 138 DEIIVGCQSGK---RSMMAATDLLNAVSTHA-NYPS 169 (188)
Q Consensus 138 ~~ivv~C~sG~---~a~~a~~~L~~~G~~~v-~l~G 169 (188)
++|++.|+.|+ ....+++.|...||+.. ++.+
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 58999999875 46789999999999843 5544
No 95
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=68.04 E-value=8.9 Score=27.32 Aligned_cols=36 Identities=8% Similarity=0.165 Sum_probs=30.4
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
+..+++++|++-..+...+..|...|+....+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 356899999998888899999999998866888875
No 96
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=67.60 E-value=10 Score=27.11 Aligned_cols=45 Identities=9% Similarity=0.054 Sum_probs=34.0
Q ss_pred HHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 127 l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+...+... +..+++++|++-..+..++..|...|+....+.|++.
T Consensus 22 L~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~hg~~~ 66 (172)
T 1t5i_A 22 LFDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMP 66 (172)
T ss_dssp HHHHHHHS-CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred HHHHHHhC-CCCcEEEEECCHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 33333333 4567999999988888999999999998777888753
No 97
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=65.94 E-value=49 Score=26.79 Aligned_cols=82 Identities=13% Similarity=0.155 Sum_probs=43.0
Q ss_pred HHHHHHHH-hCC-CEEEecCCh----hhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc-CCCCcEEEEcCCC-h
Q 029759 77 VRVAHELL-QAG-HRYLDVRTP----EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSG-K 148 (188)
Q Consensus 77 ~~~~~~~l-~~~-~~iIDvR~~----~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l-~~~~~ivv~C~sG-~ 148 (188)
+++..+.+ +.+ ..|||+|.. +.+....| .-+++|+. ++...+.+.+......+ ..+.+|+|+|..| .
T Consensus 207 ~~~~~~~L~~~GI~~VInL~~~~y~~~~~~~~gi-~~~~ipi~----D~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~g 281 (348)
T 1ohe_A 207 PETYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGF-DHHDLFFA----DGSTPTDAIVKEFLDICENAEGAIAVHSKAGLG 281 (348)
T ss_dssp THHHHHHHHHTTEEEEEECSCCSSCTHHHHTTTC-EEEECCCC----TTCCCCHHHHHHHHHHHHSCSSEEEEECSSSSH
T ss_pred HHHHHHHHHHcCCCEEEECCCCcCChhhhhcCCc-EEEEecCC----CCCCCCHHHHHHHHHHHHhCCCcEEEECCCCCC
Confidence 33333333 445 689999964 22332212 13556653 22333444444444333 4578999999998 4
Q ss_pred HHH-HHHHHHHH-CCCC
Q 029759 149 RSM-MAATDLLN-AVST 163 (188)
Q Consensus 149 ~a~-~a~~~L~~-~G~~ 163 (188)
|+. .++..|.. .|++
T Consensus 282 RTGtvvaayLm~~~g~s 298 (348)
T 1ohe_A 282 RTGTLIACYIMKHYRMT 298 (348)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHcCCC
Confidence 544 33333433 6664
No 98
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=65.34 E-value=7.3 Score=27.47 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=30.8
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+..+++++|++-..+...+..|...|+....+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 3467899999888888999999999998778888753
No 99
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=63.63 E-value=13 Score=26.12 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=33.9
Q ss_pred HHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 126 ~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
.+...+... +..+++++|++-..+...+..|...|+....+.|++.
T Consensus 20 ~l~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 65 (165)
T 1fuk_A 20 CLTDLYDSI-SVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLP 65 (165)
T ss_dssp HHHHHHHHT-TCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred HHHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 344444433 4567899999888888999999999987667888753
No 100
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=61.16 E-value=48 Score=25.25 Aligned_cols=85 Identities=13% Similarity=0.093 Sum_probs=45.1
Q ss_pred cCHHHHHHHHhC---C-CEEEecCCh------hhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhcc----C--CCC
Q 029759 75 VPVRVAHELLQA---G-HRYLDVRTP------EEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF----R--KHD 138 (188)
Q Consensus 75 i~~~~~~~~l~~---~-~~iIDvR~~------~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l----~--~~~ 138 (188)
.+++++.+.++. + ..|||++.. +.|...+| --+++|+.+ .+...+.+.+......+ . ++.
T Consensus 67 ~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi-~y~~~p~~D---~~~~P~~~~l~~~~~~i~~~~~~~~~~ 142 (241)
T 2c46_A 67 FHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGI-KYIKLQCKG---HGECPTTENTETFIRLCERFNERNPPE 142 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTC-EEEECCCCC---TTCCCCHHHHHHHHHHHTTC-----CE
T ss_pred CCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCC-EEEEEecCC---CCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 567777666542 3 789999864 23333222 134566521 12344445554444332 2 247
Q ss_pred cEEEEcCCC-hHHH-HHHHHH-HHCCCC
Q 029759 139 EIIVGCQSG-KRSM-MAATDL-LNAVST 163 (188)
Q Consensus 139 ~ivv~C~sG-~~a~-~a~~~L-~~~G~~ 163 (188)
+|+|.|..| .|+. .++..| +..|++
T Consensus 143 ~VlVHC~aG~gRTGt~ia~yLm~~~~~s 170 (241)
T 2c46_A 143 LIGVHCTHGFNRTGFLICAFLVEKMDWS 170 (241)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHTTCCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 899999988 3433 334344 335654
No 101
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=60.98 E-value=11 Score=30.24 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=25.1
Q ss_pred CcEEEEcCCCh---HHHHHHHHHHHCCCCc-eEecC
Q 029759 138 DEIIVGCQSGK---RSMMAATDLLNAVSTH-ANYPS 169 (188)
Q Consensus 138 ~~ivv~C~sG~---~a~~a~~~L~~~G~~~-v~l~G 169 (188)
.+|+|+|+.|+ .+..+++.|...||+. +++.+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 57999999874 4678999999999984 35443
No 102
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=60.71 E-value=20 Score=25.62 Aligned_cols=28 Identities=18% Similarity=0.259 Sum_probs=18.8
Q ss_pred CCCcEEEEcCCC-hHHHH--HHHHHHHCCCC
Q 029759 136 KHDEIIVGCQSG-KRSMM--AATDLLNAVST 163 (188)
Q Consensus 136 ~~~~ivv~C~sG-~~a~~--a~~~L~~~G~~ 163 (188)
.+.+|+|+|..| .||.. ++..+...|++
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 468999999998 45443 44455556665
No 103
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=59.96 E-value=11 Score=29.44 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=24.6
Q ss_pred CcEEEEcCCCh---HHHHHHHHHHHCCCCc-eEec
Q 029759 138 DEIIVGCQSGK---RSMMAATDLLNAVSTH-ANYP 168 (188)
Q Consensus 138 ~~ivv~C~sG~---~a~~a~~~L~~~G~~~-v~l~ 168 (188)
.+|+++|+.|+ ....+++.|...||+. +++.
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEe
Confidence 57999999875 4678999999999984 3544
No 104
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=59.28 E-value=12 Score=27.34 Aligned_cols=36 Identities=6% Similarity=-0.137 Sum_probs=30.0
Q ss_pred CCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 137 HDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
..+++++|++-..+...+..|...|+....+.|++.
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~~ 89 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKD 89 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCCEEEECTTSC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 457999999988888999999999998777888753
No 105
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=57.65 E-value=43 Score=22.99 Aligned_cols=82 Identities=18% Similarity=0.198 Sum_probs=40.8
Q ss_pred HHHHHHHHhCC-CEEEecCChhhHhcC-----------CCCC--eEEcCcccccCCCCCCCHHHHHHHHhccC--CCCcE
Q 029759 77 VRVAHELLQAG-HRYLDVRTPEEFSAG-----------HATG--AINVPYMYRVGSGMTKNLKFVEEVSTRFR--KHDEI 140 (188)
Q Consensus 77 ~~~~~~~l~~~-~~iIDvR~~~ef~~g-----------hIpg--Ainip~~~~~~~~~~~~~~~l~~~~~~l~--~~~~i 140 (188)
.+++..+.+.+ ..|||+|+..|.... .-.| -+++|+. +....+.+.+......+. ....
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~----d~~~p~~~~~~~~~~~i~~~~~~~- 92 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIP----DGGVPSDSQFLTIMKWLLSEKEGN- 92 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCC----TTCCCCHHHHHHHHHHHHHCCTTE-
T ss_pred HHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCC----CCCCCChHHHHHHHHHHHHhCCCC-
Confidence 34454444445 789999998654321 1122 3556653 222233344444443331 1233
Q ss_pred EEEcCCC-hHHHH-HHHHHHH-CCCC
Q 029759 141 IVGCQSG-KRSMM-AATDLLN-AVST 163 (188)
Q Consensus 141 vv~C~sG-~~a~~-a~~~L~~-~G~~ 163 (188)
+++|..| .|+.. ++..|.. .|.+
T Consensus 93 lVHC~aG~~Rtg~~~~~~l~~~~~~~ 118 (161)
T 2i6j_A 93 LVHCVGGIGRTGTILASYLILTEGLE 118 (161)
T ss_dssp EEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 9999998 45443 3333333 3543
No 106
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=57.30 E-value=18 Score=29.04 Aligned_cols=47 Identities=11% Similarity=-0.005 Sum_probs=36.2
Q ss_pred HHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 126 ~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
.+........++.+++++|++-..+...+..|...|+....+.|++.
T Consensus 265 ~l~~~l~~~~~~~~~lVf~~~~~~~~~l~~~L~~~~~~~~~~h~~~~ 311 (417)
T 2i4i_A 265 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 311 (417)
T ss_dssp HHHHHHHTCCTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred HHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHCCCCeeEecCCCC
Confidence 44445555556788999999888888899999999988667888753
No 107
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=57.07 E-value=16 Score=31.81 Aligned_cols=36 Identities=25% Similarity=0.189 Sum_probs=31.6
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
++.++||||.+-..+..++..|...|+....|.||+
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~~~~~~h~~l 301 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANL 301 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCCCEEEecCCC
Confidence 567899999998888899999999999877888886
No 108
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=56.26 E-value=14 Score=28.95 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=25.2
Q ss_pred CcEEEEcCCCh---HHHHHHHHHHHCCCCc-eEecC
Q 029759 138 DEIIVGCQSGK---RSMMAATDLLNAVSTH-ANYPS 169 (188)
Q Consensus 138 ~~ivv~C~sG~---~a~~a~~~L~~~G~~~-v~l~G 169 (188)
++|+++|+.|+ .+..+++.|...||+. +++.+
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 58999999875 4678999999999984 35443
No 109
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=53.80 E-value=27 Score=27.34 Aligned_cols=90 Identities=10% Similarity=0.035 Sum_probs=53.6
Q ss_pred cCHHHHHHHHhC----C-CEEEecCChhhHhcCCCCCeEEcCc-ccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCCh
Q 029759 75 VPVRVAHELLQA----G-HRYLDVRTPEEFSAGHATGAINVPY-MYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (188)
Q Consensus 75 i~~~~~~~~l~~----~-~~iIDvR~~~ef~~ghIpgAinip~-~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG~ 148 (188)
++.+++.++.+- + -++|.|.+.+|.....=-|+--|-. +.++. ....+.+...++...++++ +++++.||.
T Consensus 137 L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~-tf~vdl~~t~~L~~~ip~~--~~~VsESGI 213 (258)
T 4a29_A 137 LTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFE-TGEINKENQRKLISMIPSN--VVKVAKLGI 213 (258)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTT-TCCBCHHHHHHHHTTSCTT--SEEEEEESS
T ss_pred cCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCcc-ccccCHHHHHHHHhhCCCC--CEEEEcCCC
Confidence 566666666532 3 6889999988876321112211111 01111 1112344555566556554 477889999
Q ss_pred HHHHHHHHHHHCCCCceEe
Q 029759 149 RSMMAATDLLNAVSTHANY 167 (188)
Q Consensus 149 ~a~~a~~~L~~~G~~~v~l 167 (188)
.+..-+..|...|++.+.+
T Consensus 214 ~t~~dv~~l~~~G~~a~LV 232 (258)
T 4a29_A 214 SERNEIEELRKLGVNAFLI 232 (258)
T ss_dssp CCHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHCCCCEEEE
Confidence 8888889999999986643
No 110
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=51.82 E-value=15 Score=24.44 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=18.2
Q ss_pred CcEEEEcCCChHHHH-HH----HHHHHCCCC
Q 029759 138 DEIIVGCQSGKRSMM-AA----TDLLNAVST 163 (188)
Q Consensus 138 ~~ivv~C~sG~~a~~-a~----~~L~~~G~~ 163 (188)
++|+++|++|..+.. +. ..+.+.|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 569999999965443 44 345667886
No 111
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=51.63 E-value=29 Score=29.70 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=33.2
Q ss_pred CCCcEEEEcCCCh---HHHHHHHHHHHCCCCc-eEecCc---------HHhhhhCCCccc
Q 029759 136 KHDEIIVGCQSGK---RSMMAATDLLNAVSTH-ANYPSK---------PLTWFLSNQLLT 182 (188)
Q Consensus 136 ~~~~ivv~C~sG~---~a~~a~~~L~~~G~~~-v~l~GG---------~~~W~~~g~p~~ 182 (188)
+.++|+++|+.|+ ....+++.|...||+. +++.+. +..|...+.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4578999999875 4667889999999984 455542 345666665554
No 112
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=50.96 E-value=32 Score=27.86 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=46.5
Q ss_pred cCHHHHHHHHhC----CCEEEecCChhhHhcCCCCC-eEEcCcccccCCCCCCCHHHHHHHHhc----c--CCCCcEEEE
Q 029759 75 VPVRVAHELLQA----GHRYLDVRTPEEFSAGHATG-AINVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIVG 143 (188)
Q Consensus 75 i~~~~~~~~l~~----~~~iIDvR~~~ef~~ghIpg-Ainip~~~~~~~~~~~~~~~l~~~~~~----l--~~~~~ivv~ 143 (188)
-..+++...++. .+.|++.++...|....+.+ -.++|+. +....+.+.+...... + +++.++++.
T Consensus 50 n~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~p----D~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vH 125 (339)
T 3v0d_A 50 NPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMID----DHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIH 125 (339)
T ss_dssp EEHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEEC----TTSCCCHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred CCHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccC----CCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 346666666642 38999998655565433333 3456653 3333444444333222 2 345789999
Q ss_pred cCCC-hH-HHHHHHHHHHCCC
Q 029759 144 CQSG-KR-SMMAATDLLNAVS 162 (188)
Q Consensus 144 C~sG-~~-a~~a~~~L~~~G~ 162 (188)
|..| .| +..++..|...|.
T Consensus 126 C~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 126 SKGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp CSSSSHHHHHHHHHHHHHTTS
T ss_pred eCCCCcchHHHHHHHHHHhcC
Confidence 9876 23 4445555555543
No 113
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=49.96 E-value=13 Score=24.92 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=21.1
Q ss_pred CCCCcEEEEcCCChHHHHHHHHHHH----CCCC
Q 029759 135 RKHDEIIVGCQSGKRSMMAATDLLN----AVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a~~a~~~L~~----~G~~ 163 (188)
.+..+|++.|..|..+...+..+++ .|++
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~ 36 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR 36 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc
Confidence 3556799999999887777776654 5765
No 114
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=48.69 E-value=15 Score=27.14 Aligned_cols=37 Identities=14% Similarity=0.024 Sum_probs=30.5
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+..+++++|++-..+...+..|...|+....+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~~~~lhg~~~ 66 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDLS 66 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 3568999999877788899999999998778888753
No 115
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=47.18 E-value=44 Score=22.18 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=47.0
Q ss_pred CcccCHHHHHHHHhCCCEEE-ecCChhhHhc-CCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCC--
Q 029759 72 PTSVPVRVAHELLQAGHRYL-DVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 147 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~~~iI-DvR~~~ef~~-ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG-- 147 (188)
+..++.+.+..+-+.+.++. |.+...++-. -.+++..-+.+. +....+..+.....+..++.+++.++.|
T Consensus 18 ~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~V~~l~d~GdP 91 (117)
T 3hh1_A 18 LDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYH------SFNEERAVRQVIELLEEGSDVALVTDAGTP 91 (117)
T ss_dssp GGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECC------STTHHHHHHHHHHHHHTTCCEEEEEETTSC
T ss_pred HHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccC------CccHHHHHHHHHHHHHCCCeEEEEecCCcC
Confidence 33577777666656666665 4444334332 224443222221 1111233444444455667888888433
Q ss_pred ---hHHHHHHHHHHHCCCCceEecC
Q 029759 148 ---KRSMMAATDLLNAVSTHANYPS 169 (188)
Q Consensus 148 ---~~a~~a~~~L~~~G~~~v~l~G 169 (188)
.+.......+...|++-..+.|
T Consensus 92 ~i~~~~~~l~~~~~~~gi~v~viPG 116 (117)
T 3hh1_A 92 AISDPGYTMASAAHAAGLPVVPVPG 116 (117)
T ss_dssp GGGSTTHHHHHHHHHTTCCEEEEC-
T ss_pred eEeccHHHHHHHHHHCCCcEEEeCC
Confidence 2345566677778887445554
No 116
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=46.63 E-value=21 Score=24.92 Aligned_cols=29 Identities=17% Similarity=0.185 Sum_probs=19.0
Q ss_pred CCCCcEEEEcCCC-hHHHH-H-HHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSG-KRSMM-A-ATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG-~~a~~-a-~~~L~~~G~~ 163 (188)
..+.+|+++|..| .||.. + +..+...|++
T Consensus 83 ~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~ 114 (155)
T 2hxp_A 83 SQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114 (155)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HcCCcEEEECCCCCchhHHHHHHHHHHHcCCC
Confidence 3568999999998 56553 3 3444455653
No 117
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=45.18 E-value=75 Score=22.10 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=45.8
Q ss_pred cCHHHHHHHHhCC-CEEEecCChhhHh----------cCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccC--CCCcEE
Q 029759 75 VPVRVAHELLQAG-HRYLDVRTPEEFS----------AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR--KHDEII 141 (188)
Q Consensus 75 i~~~~~~~~l~~~-~~iIDvR~~~ef~----------~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~--~~~~iv 141 (188)
++...+..+.+.| -++|+.|+..+-. ...+ ..+.+|.+ ....+.+.+.+.+..+. .+++|+
T Consensus 28 p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~-~~~~i~~D-----v~~~~~~~v~~~~~~i~~~~G~dVL 101 (157)
T 3gxh_A 28 PNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGM-DYVYIPVD-----WQNPKVEDVEAFFAAMDQHKGKDVL 101 (157)
T ss_dssp CCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTC-EEEECCCC-----TTSCCHHHHHHHHHHHHHTTTSCEE
T ss_pred CCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCC-eEEEecCC-----CCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 5677777777777 6788888654321 1001 25666652 11122355555554431 234899
Q ss_pred EEcCCChHHHH-HHHHHHHCCCC
Q 029759 142 VGCQSGKRSMM-AATDLLNAVST 163 (188)
Q Consensus 142 v~C~sG~~a~~-a~~~L~~~G~~ 163 (188)
|.|.+|.+... .+..+...|.+
T Consensus 102 VnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 102 VHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp EECSBSHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHHHcCCC
Confidence 99998865443 33344456654
No 118
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=42.94 E-value=13 Score=24.67 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=18.7
Q ss_pred CcEEEEcCCChHHHHHHHH----HHHCCCC
Q 029759 138 DEIIVGCQSGKRSMMAATD----LLNAVST 163 (188)
Q Consensus 138 ~~ivv~C~sG~~a~~a~~~----L~~~G~~ 163 (188)
++|++.|++|..+...+.. ++..|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 4699999999765555544 5567886
No 119
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=42.29 E-value=49 Score=22.62 Aligned_cols=40 Identities=8% Similarity=-0.058 Sum_probs=26.0
Q ss_pred CCCCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhh
Q 029759 135 RKHDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTW 174 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W 174 (188)
+++-+|.++.++..........|+..||..+ .-..|..++
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al 50 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTAL 50 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHH
Confidence 4555677777665555566677888888766 455665554
No 120
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=42.07 E-value=9.5 Score=25.37 Aligned_cols=27 Identities=15% Similarity=0.252 Sum_probs=17.8
Q ss_pred CCcEEEEcCCChHHHHHHHHH----HHCCCC
Q 029759 137 HDEIIVGCQSGKRSMMAATDL----LNAVST 163 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a~~~L----~~~G~~ 163 (188)
.-+|++.|++|..+..++..+ ...|++
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 345999999996543555444 456776
No 121
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=41.71 E-value=24 Score=30.05 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
++.+++|||.+-..+...+..|...|+....|.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCCEEEecCCCC
Confidence 5678999999988888999999999998668888864
No 122
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=41.39 E-value=31 Score=27.21 Aligned_cols=36 Identities=14% Similarity=0.023 Sum_probs=30.2
Q ss_pred CCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 137 HDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
..+++++|.+-..+...+..|...|+....+.|++.
T Consensus 28 ~~~~LVF~~t~~~~~~l~~~L~~~g~~~~~lhg~l~ 63 (300)
T 3i32_A 28 PDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDMS 63 (300)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHTTTCCEEEECSCCC
T ss_pred CCCEEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 678999999877788899999999998777888743
No 123
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=41.26 E-value=31 Score=24.61 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=19.5
Q ss_pred CCCCcEEEEcCCC-hHHHH--HHHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSG-KRSMM--AATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG-~~a~~--a~~~L~~~G~~ 163 (188)
..+.+|+++|..| .||.. ++..+...|++
T Consensus 85 ~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred hcCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 3578999999998 56554 33445556764
No 124
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=41.18 E-value=42 Score=26.50 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=30.7
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
+..+++++|.+-..+...+..|...|+....+.|++
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 284 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM 284 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 557899999988888889999999999877888874
No 125
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=40.54 E-value=92 Score=24.51 Aligned_cols=91 Identities=10% Similarity=0.142 Sum_probs=52.6
Q ss_pred CcccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCeEEcCcccccCCCCCCC-HHHHHHHHhccCCCCcEEEEcCCC--
Q 029759 72 PTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-- 147 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~~~iI-DvR~~~ef~~ghIpgAinip~~~~~~~~~~~~-~~~l~~~~~~l~~~~~ivv~C~sG-- 147 (188)
+..++...+..+-+.+.++. |.|...+.-...-++..-+++. ..+ .+....+...+..++.|++++++|
T Consensus 28 ~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~~~i~~~-------~~~~~~~~~~li~~l~~G~~Va~lsdaGdP 100 (296)
T 3kwp_A 28 LDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITTKQISFH-------EHNTQERIPQLIAKLKQGMQIAQVSDAGMP 100 (296)
T ss_dssp GGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCCEEEECS-------TTTHHHHHHHHHHHHHTTCEEEEECSSBCT
T ss_pred ccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeeeeeeehh-------hcchhhHhHHHHHHHhcCceEEEeccCCCC
Confidence 34688887777777778888 6675544432111232223321 112 234444444455678888887555
Q ss_pred ---hHHHHHHHHHHHCCCCceEecC
Q 029759 148 ---KRSMMAATDLLNAVSTHANYPS 169 (188)
Q Consensus 148 ---~~a~~a~~~L~~~G~~~v~l~G 169 (188)
.........+...|++-..+.|
T Consensus 101 ~i~~~g~~lv~~~~~~gi~v~viPG 125 (296)
T 3kwp_A 101 SISDPGHELVNACIDAHIPVVPLPG 125 (296)
T ss_dssp TSSHHHHHHHHHHHHTTCCEEECCC
T ss_pred CCCCCchHHHHHHHHcCCCeeeCCC
Confidence 3455677778888887546665
No 126
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=40.15 E-value=20 Score=23.96 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=18.0
Q ss_pred CcEEEEcCCChHHHH-HHHH----HHHCCCC
Q 029759 138 DEIIVGCQSGKRSMM-AATD----LLNAVST 163 (188)
Q Consensus 138 ~~ivv~C~sG~~a~~-a~~~----L~~~G~~ 163 (188)
++|+++|++|..+.. ++.. +...|++
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 579999999965433 4444 5567886
No 127
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=40.08 E-value=21 Score=24.42 Aligned_cols=26 Identities=31% Similarity=0.387 Sum_probs=17.8
Q ss_pred CCcEEEEcCCChHHHHH-HH----HHHHCCC
Q 029759 137 HDEIIVGCQSGKRSMMA-AT----DLLNAVS 162 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a-~~----~L~~~G~ 162 (188)
-..|+++|++|.-+... +. .+...|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999654443 33 3556788
No 128
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=39.93 E-value=29 Score=27.33 Aligned_cols=24 Identities=8% Similarity=0.167 Sum_probs=15.9
Q ss_pred CHHHHHHHHhCC-CEEEecCChhhH
Q 029759 76 PVRVAHELLQAG-HRYLDVRTPEEF 99 (188)
Q Consensus 76 ~~~~~~~~l~~~-~~iIDvR~~~ef 99 (188)
+++++..+.+.+ ..||+++...+.
T Consensus 28 ~~~d~~~L~~~GIt~Vlnl~~~~e~ 52 (294)
T 3nme_A 28 TPEDVDKLRKIGVKTIFCLQQDPDL 52 (294)
T ss_dssp STHHHHHHHHTTEEEEEECCCHHHH
T ss_pred CHHHHHHHHHCCCCEEEECCCCcch
Confidence 345555554556 789999987663
No 129
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=39.08 E-value=45 Score=24.06 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=32.4
Q ss_pred HHHHhccCCCCcEEEEcCCC--hHHHHHHHHHHH---CCCCce-EecCcHHh
Q 029759 128 EEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AVSTHA-NYPSKPLT 173 (188)
Q Consensus 128 ~~~~~~l~~~~~ivv~C~sG--~~a~~a~~~L~~---~G~~~v-~l~GG~~~ 173 (188)
+.++..++++..+|+.+-.| .+|...+..|.. .|..++ .+.||-.+
T Consensus 65 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~G 116 (163)
T 4fak_A 65 QRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNG 116 (163)
T ss_dssp HHHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTTB
T ss_pred HHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCCc
Confidence 33455577777788887777 568888887765 687777 78888543
No 130
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=38.44 E-value=46 Score=23.35 Aligned_cols=29 Identities=7% Similarity=0.159 Sum_probs=19.8
Q ss_pred CCCCcEEEEcCCCh-HHH--HHHHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSGK-RSM--MAATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG~-~a~--~a~~~L~~~G~~ 163 (188)
..+.+|+|.|..|. ||. .++..+...|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 35688999999984 643 345556667764
No 131
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.60 E-value=50 Score=22.31 Aligned_cols=29 Identities=10% Similarity=-0.005 Sum_probs=22.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCCceEec
Q 029759 140 IIVGCQSGKRSMMAATDLLNAVSTHANYP 168 (188)
Q Consensus 140 ivv~C~sG~~a~~a~~~L~~~G~~~v~l~ 168 (188)
-|++|+.|.-...++..|...|++-+.++
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid 37 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIE 37 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 36777778888888999999998755444
No 132
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=34.44 E-value=74 Score=24.87 Aligned_cols=86 Identities=17% Similarity=0.107 Sum_probs=50.7
Q ss_pred cCHHHHHHHHh----CC-CEEEecCChhhHhcCC-----CCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEc
Q 029759 75 VPVRVAHELLQ----AG-HRYLDVRTPEEFSAGH-----ATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGC 144 (188)
Q Consensus 75 i~~~~~~~~l~----~~-~~iIDvR~~~ef~~gh-----IpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C 144 (188)
++.+++.++++ -+ .+++++.+.+|-.... +=|--|..+. ..-.+.+...++...++.+ ++++|
T Consensus 153 L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~-----t~~~dl~~~~~L~~~ip~~--~~vIa 225 (272)
T 3tsm_A 153 VDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLR-----SFEVNLAVSERLAKMAPSD--RLLVG 225 (272)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTT-----TCCBCTHHHHHHHHHSCTT--SEEEE
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCc-----cCCCChHHHHHHHHhCCCC--CcEEE
Confidence 45556555542 23 6788888887765321 1122222221 1112334555565556543 57788
Q ss_pred CCChHHHHHHHHHHHCCCCceEe
Q 029759 145 QSGKRSMMAATDLLNAVSTHANY 167 (188)
Q Consensus 145 ~sG~~a~~a~~~L~~~G~~~v~l 167 (188)
.+|..+..-+..+...|.+.+.+
T Consensus 226 esGI~t~edv~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 226 ESGIFTHEDCLRLEKSGIGTFLI 248 (272)
T ss_dssp ESSCCSHHHHHHHHTTTCCEEEE
T ss_pred ECCCCCHHHHHHHHHcCCCEEEE
Confidence 99998888888999999886643
No 133
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=32.69 E-value=46 Score=25.83 Aligned_cols=48 Identities=13% Similarity=0.011 Sum_probs=35.0
Q ss_pred HHHHHHHhcc-CCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 125 KFVEEVSTRF-RKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 125 ~~l~~~~~~l-~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+.+......+ ....+++++|++-..+...+..|...|+....+.|++.
T Consensus 225 ~~~~~l~~~l~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 273 (367)
T 1hv8_A 225 ERFEALCRLLKNKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLS 273 (367)
T ss_dssp GHHHHHHHHHCSTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSC
T ss_pred HHHHHHHHHHhcCCCcEEEEECCHHHHHHHHHHHHhcCCCeEEeeCCCC
Confidence 3444443333 34577899999888888999999999988767887753
No 134
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=32.45 E-value=75 Score=25.45 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=29.7
Q ss_pred CCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecC
Q 029759 135 RKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPS 169 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~G 169 (188)
.++.+++|+|.+-..+......|...|+....+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCCcEEEec
Confidence 45788999999877788899999999988667887
No 135
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=38.44 E-value=9.6 Score=27.04 Aligned_cols=37 Identities=16% Similarity=0.013 Sum_probs=29.2
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
++.+++++|++-..+..++..|...|+....+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGINNCYLEGEMV 65 (170)
Confidence 3467899999888888889999988887667777754
No 136
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=32.01 E-value=67 Score=23.23 Aligned_cols=47 Identities=13% Similarity=0.081 Sum_probs=31.3
Q ss_pred HHHHhccCCCCcEEEEcCCC--hHHHHHHHHHHH---CCCCce-EecCcHHhh
Q 029759 128 EEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AVSTHA-NYPSKPLTW 174 (188)
Q Consensus 128 ~~~~~~l~~~~~ivv~C~sG--~~a~~a~~~L~~---~G~~~v-~l~GG~~~W 174 (188)
+.+...++++..+|+.+-.| .+|...+..|.. .|..++ .+.||-.+.
T Consensus 61 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~Gl 113 (167)
T 1to0_A 61 DRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLGL 113 (167)
T ss_dssp HHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSCC
T ss_pred HHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCCC
Confidence 34445565555577777777 568888888776 576667 688885443
No 137
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=30.74 E-value=54 Score=28.93 Aligned_cols=38 Identities=5% Similarity=-0.063 Sum_probs=31.3
Q ss_pred cCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 134 FRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 134 l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
+.++.+++|+|.+-.++...+..|...|+...++.|++
T Consensus 436 ~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~~~~lh~~~ 473 (664)
T 1c4o_A 436 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHEL 473 (664)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred HhcCCEEEEEECCHHHHHHHHHHHHhcCCCceeecCCC
Confidence 34567899999988888999999999999766777774
No 138
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=30.37 E-value=81 Score=27.77 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=31.4
Q ss_pred cCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 134 FRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 134 l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
+..+.+++|+|.+-.++...+..|...|+...++.|++
T Consensus 442 ~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~~~~lh~~~ 479 (661)
T 2d7d_A 442 IERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEI 479 (661)
T ss_dssp HTTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred HhcCCeEEEEECCHHHHHHHHHHHHhcCCCeEEEeCCC
Confidence 45667899999988888999999999998766777764
No 139
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=29.99 E-value=50 Score=26.25 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=30.6
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
+..+++++|++-..+...+..|...|+....+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCeEEEecCCC
Confidence 456799999988888899999999998877888874
No 140
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=29.43 E-value=76 Score=22.94 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=19.6
Q ss_pred CCCCcEEEEcCCC-hHHHH--HHHHHHHCCCC
Q 029759 135 RKHDEIIVGCQSG-KRSMM--AATDLLNAVST 163 (188)
Q Consensus 135 ~~~~~ivv~C~sG-~~a~~--a~~~L~~~G~~ 163 (188)
..+.+|+|+|..| .||.. ++..+...|++
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s 146 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNLS 146 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 4578899999998 45443 45555666664
No 141
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=29.20 E-value=64 Score=24.36 Aligned_cols=28 Identities=25% Similarity=0.061 Sum_probs=23.9
Q ss_pred CcEEEEcCCC-hHHHHHHHHHHHCCCCce
Q 029759 138 DEIIVGCQSG-KRSMMAATDLLNAVSTHA 165 (188)
Q Consensus 138 ~~ivv~C~sG-~~a~~a~~~L~~~G~~~v 165 (188)
-.+.++|.+. +||..+-..|.+.||...
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf~V~ 54 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGFSVR 54 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTCEEE
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCCceE
Confidence 4589999985 899999999999999643
No 142
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=29.20 E-value=43 Score=26.63 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=30.5
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+..+++++|++-..+...+..|...|+....+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCCeEEecCCCC
Confidence 4568999999878888899999999988767888753
No 143
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.13 E-value=68 Score=21.85 Aligned_cols=28 Identities=7% Similarity=0.033 Sum_probs=21.3
Q ss_pred EEEcCCChHHHHHHHHHHHCCCCceEec
Q 029759 141 IVGCQSGKRSMMAATDLLNAVSTHANYP 168 (188)
Q Consensus 141 vv~C~sG~~a~~a~~~L~~~G~~~v~l~ 168 (188)
|++|+.|.-....+..|...|++-+.++
T Consensus 6 vlI~G~G~vG~~la~~L~~~g~~V~vid 33 (153)
T 1id1_A 6 FIVCGHSILAINTILQLNQRGQNVTVIS 33 (153)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 5666778888889999999998755443
No 144
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=29.11 E-value=55 Score=25.72 Aligned_cols=36 Identities=8% Similarity=-0.080 Sum_probs=30.4
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
++.+++++|++-..+...+..|...|+....+.|++
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 277 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDL 277 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECTTS
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCCC
Confidence 457899999987888889999999998876888875
No 145
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=28.35 E-value=68 Score=27.15 Aligned_cols=32 Identities=9% Similarity=-0.040 Sum_probs=26.4
Q ss_pred cCCCCcEEEEcCCChHHHHHHHHHHHCCCCce
Q 029759 134 FRKHDEIIVGCQSGKRSMMAATDLLNAVSTHA 165 (188)
Q Consensus 134 l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v 165 (188)
+.+.++|++...+|..|..++.+|++.|++.+
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e~G~eVi 38 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQKGAVPY 38 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHHTTCEEE
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHHcCCEEE
Confidence 55667888888889999999999988898754
No 146
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=27.89 E-value=98 Score=22.63 Aligned_cols=45 Identities=11% Similarity=0.040 Sum_probs=28.4
Q ss_pred CCcEEEEcCCChHHHHHHHHHHHCCCCce-EecCcHHhhhhCCCccc
Q 029759 137 HDEIIVGCQSGKRSMMAATDLLNAVSTHA-NYPSKPLTWFLSNQLLT 182 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a~~~L~~~G~~~v-~l~GG~~~W~~~g~p~~ 182 (188)
.+++++|.. |..+..++..|+..||+.+ .++.....+.-.+.|+-
T Consensus 12 ~k~v~IiGA-Gg~g~~v~~~l~~~~~~~vgfiDd~~~~~~~~g~~Vl 57 (220)
T 4ea9_A 12 IGGVVIIGG-GGHAKVVIESLRACGETVAAIVDADPTRRAVLGVPVV 57 (220)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECSCC---CBTTBCEE
T ss_pred CCCEEEEcC-CHHHHHHHHHHHhCCCEEEEEEeCCcccCcCCCeeEE
Confidence 367888866 4557777888888898876 67655433333355543
No 147
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=27.87 E-value=57 Score=26.03 Aligned_cols=36 Identities=8% Similarity=0.084 Sum_probs=30.1
Q ss_pred CCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 137 HDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
..+++++|++-..+...+..|...|+....+.|++.
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~~~~~~h~~~~ 311 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP 311 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSC
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCCceEEeeCCCC
Confidence 457899999878888899999999998778888753
No 148
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=27.47 E-value=2.5e+02 Score=22.80 Aligned_cols=80 Identities=9% Similarity=0.148 Sum_probs=45.3
Q ss_pred HHHHHHHh----CCCEEEecCChhhHhcCCCCCe-EEcCcccccCCCCCCCHHHHHHHHhc----c--CCCCcEEEEcCC
Q 029759 78 RVAHELLQ----AGHRYLDVRTPEEFSAGHATGA-INVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIVGCQS 146 (188)
Q Consensus 78 ~~~~~~l~----~~~~iIDvR~~~ef~~ghIpgA-inip~~~~~~~~~~~~~~~l~~~~~~----l--~~~~~ivv~C~s 146 (188)
+++...++ +.+.|++.+. ..|......+. .++|+. ++...+.+.+...... + +++.+++++|..
T Consensus 50 ~~v~~~L~~~H~~~y~V~NLse-~~Yd~~~f~~~V~~~~~p----D~~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~a 124 (361)
T 3n0a_A 50 DDIRSFLDSRHLDHYTVYNLSP-KSYRTAKFHSRVSECSWP----IRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLD 124 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEECSS-SCCGGGSCGGGEEECCCC----SSSCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECS
T ss_pred HHHHHHHHHhCCCeEEEEECCC-CCCChhhcCCcEEEeecC----CCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 45555553 3489999964 56765554443 456653 3444444444332222 2 456789999987
Q ss_pred C-hH-HHHHHHHHHHCCC
Q 029759 147 G-KR-SMMAATDLLNAVS 162 (188)
Q Consensus 147 G-~~-a~~a~~~L~~~G~ 162 (188)
| .| +..++..|...|.
T Consensus 125 G~GRtg~~ia~~Li~~~~ 142 (361)
T 3n0a_A 125 GRAASSILVGAMFIFCNL 142 (361)
T ss_dssp CTHHHHHHHHHHHHHTTS
T ss_pred CCccHHHHHHHHHHHhcC
Confidence 6 33 4455566666554
No 149
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=26.82 E-value=77 Score=26.72 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=29.5
Q ss_pred CCCCcEEEEcCCChHHHHHHHHHHHC---CCCceEecCcH
Q 029759 135 RKHDEIIVGCQSGKRSMMAATDLLNA---VSTHANYPSKP 171 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a~~a~~~L~~~---G~~~v~l~GG~ 171 (188)
.++.+++|+|.+-..+..++..|... |+....+.|++
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~~v~~~h~~~ 376 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKI 376 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTSCEEEESTTS
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCceEEEecCCC
Confidence 45678999999877788888888876 77655788875
No 150
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=25.77 E-value=87 Score=20.80 Aligned_cols=28 Identities=11% Similarity=-0.072 Sum_probs=20.2
Q ss_pred EEEcCCChHHHHHHHHHHHCCCCceEec
Q 029759 141 IVGCQSGKRSMMAATDLLNAVSTHANYP 168 (188)
Q Consensus 141 vv~C~sG~~a~~a~~~L~~~G~~~v~l~ 168 (188)
|++|+.|.-....+..|...|++-+.++
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 5566667777788888888888755443
No 151
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=25.22 E-value=1.1e+02 Score=25.09 Aligned_cols=33 Identities=12% Similarity=-0.000 Sum_probs=28.6
Q ss_pred cEEEEcCCChHHHHHHHHHHHCCCCceEecCcH
Q 029759 139 EIIVGCQSGKRSMMAATDLLNAVSTHANYPSKP 171 (188)
Q Consensus 139 ~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~ 171 (188)
.++++|++-..+...+..|...|+....+.|+.
T Consensus 302 ~~lVF~~t~~~a~~l~~~L~~~~~~~~~lhg~~ 334 (434)
T 2db3_A 302 GTIVFVETKRGADFLASFLSEKEFPTTSIHGDR 334 (434)
T ss_dssp TEEEECSSHHHHHHHHHHHHHTTCCEEEESTTS
T ss_pred CEEEEEeCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 489999988888899999999999877888874
No 152
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=25.16 E-value=84 Score=26.80 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=29.6
Q ss_pred CCCCcEEEEcCCChHHHHHHHHHHHC---CCCceEecCcH
Q 029759 135 RKHDEIIVGCQSGKRSMMAATDLLNA---VSTHANYPSKP 171 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a~~a~~~L~~~---G~~~v~l~GG~ 171 (188)
.++.+++|+|.+-..+..++..|... |+....+.|++
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~~v~~~hg~~ 325 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKI 325 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTSCEEEESTTS
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 45678999999877788888888876 77655788875
No 153
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=24.87 E-value=2.4e+02 Score=21.66 Aligned_cols=109 Identities=17% Similarity=0.030 Sum_probs=56.6
Q ss_pred CcccCHHHHHHHHhCCCEEEecCChhhHhcCCC-CCeEEcCcccccCCCCCCCHHHHHH-HHhccCCCCcEEEEcCCC--
Q 029759 72 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHA-TGAINVPYMYRVGSGMTKNLKFVEE-VSTRFRKHDEIIVGCQSG-- 147 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghI-pgAinip~~~~~~~~~~~~~~~l~~-~~~~l~~~~~ivv~C~sG-- 147 (188)
+..++.+.+..+-+.+.++.|.|...+.-. ++ +++.-++...... ....+.+.+.+ .......++.|++.+.+.
T Consensus 27 ~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~~~~~~~k~~~-~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~ 104 (280)
T 1s4d_A 27 PGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGAVLEFAGKRGG-KPSPKQRDISLRLVELARAGNRVLRLKGGDPF 104 (280)
T ss_dssp TTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTCCEEECSCCC---CCCCHHHHHHHHHHHHHTTCCEEEEESBCTT
T ss_pred HHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCCEEEecccccc-ccccCHHHHHHHHHHHHhCCCeEEEEcCCCCc
Confidence 345777777777677888889886555443 33 2332222211000 01112333333 333334567778877632
Q ss_pred --hHHHHHHHHHHHCCCCceEecCc---HHhhhhCCCccc
Q 029759 148 --KRSMMAATDLLNAVSTHANYPSK---PLTWFLSNQLLT 182 (188)
Q Consensus 148 --~~a~~a~~~L~~~G~~~v~l~GG---~~~W~~~g~p~~ 182 (188)
.+.......|...|++-..+.|= ..+....|.|++
T Consensus 105 i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~ 144 (280)
T 1s4d_A 105 VFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVT 144 (280)
T ss_dssp SSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSC
T ss_pred cccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCcc
Confidence 34556677788888774455541 223344466664
No 154
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=24.52 E-value=1.3e+02 Score=21.72 Aligned_cols=45 Identities=7% Similarity=-0.076 Sum_probs=31.9
Q ss_pred CHHHHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEe
Q 029759 123 NLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANY 167 (188)
Q Consensus 123 ~~~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l 167 (188)
...++......+.++-.+++.++...........+...||..+..
T Consensus 132 ~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 132 YSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred cHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccccc
Confidence 456777777778788888888876445556667788889876543
No 155
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=24.22 E-value=89 Score=24.76 Aligned_cols=46 Identities=2% Similarity=-0.071 Sum_probs=31.4
Q ss_pred HHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 126 ~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
.+....... +..+++++|.+-..+..++..|...|+....+.|++.
T Consensus 270 ~l~~~~~~~-~~~~~lvf~~~~~~~~~l~~~l~~~~~~~~~~h~~~~ 315 (414)
T 3eiq_A 270 TLCDLYETL-TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMD 315 (414)
T ss_dssp HHHHHHHSS-CCSSCEEECSCHHHHHHHHHHHHTTTCCCEEC---CH
T ss_pred HHHHHHHhC-CCCcEEEEeCCHHHHHHHHHHHHhcCCeEEEecCCCC
Confidence 344444433 3457899999877888899999999988778888754
No 156
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=24.17 E-value=1.4e+02 Score=20.08 Aligned_cols=49 Identities=2% Similarity=-0.035 Sum_probs=32.4
Q ss_pred HHHHHHHHhccCCCCcEEEEcCC----ChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 124 LKFVEEVSTRFRKHDEIIVGCQS----GKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 124 ~~~l~~~~~~l~~~~~ivv~C~s----G~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
.+.+-.....++.++++.+.+.- ...-......|+..||..+.++|-+.
T Consensus 6 ~~qivd~il~~~egtri~iLAPvv~~rKg~~~~ll~~l~~~Gf~RvrvDGe~~ 58 (119)
T 3fpn_A 6 IEQMVDRLLSYPERTKMQILAPIVSGKKGTHAKTLEDIRKQGYVRVRIDREMR 58 (119)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEEEEEEECSCCHHHHHHHHHTTCCEEEETTEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEEEEeeCCCCcHHHHHHHHHhCCCeEEEECCEEE
Confidence 34444444456777887777642 12345678889999999988877543
No 157
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=24.15 E-value=24 Score=17.58 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=9.7
Q ss_pred CccCCCchhh-hhc
Q 029759 21 PVLCPHGNNR-RGL 33 (188)
Q Consensus 21 ~~~~p~~~~~-~~~ 33 (188)
.-+||+++.+ .|-
T Consensus 7 ggfcpdpekmgdwc 20 (32)
T 4b2v_A 7 GGFCPDPEKMGDWC 20 (32)
T ss_dssp TCBCCCTTTTCCCC
T ss_pred CCcCCChHHhcchh
Confidence 3489999887 654
No 158
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=23.99 E-value=82 Score=28.77 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=32.4
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+.+|++|.|.+-..+...+..|...|+....+.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGIPHQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTCCCEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCEEEeeCCch
Confidence 4689999999988899999999999999878888744
No 159
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=23.73 E-value=2.4e+02 Score=21.41 Aligned_cols=92 Identities=10% Similarity=-0.011 Sum_probs=48.7
Q ss_pred CcccCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCC---
Q 029759 72 PTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG--- 147 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~~~iI-DvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG--- 147 (188)
+..++.+.+..+-+.+.++. |.+-..+......+++.-++.. .+...+..+...+....++.|++.+.+.
T Consensus 16 ~~lLT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~Va~L~~GDP~i 89 (264)
T 3ndc_A 16 ADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTA------PMSLDAIIDTIAEAHAAGQDVARLHSGDLSI 89 (264)
T ss_dssp GGGSBHHHHHHHHHCSEEEECSTTSCGGGGGGSCTTCEEEECT------TSCHHHHHHHHHHHHHHTCCEEEEESBCTTS
T ss_pred hHHHHHHHHHHHHcCCEEEEECCCCCHHHHhhcCCCCEEEecC------CCCHHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 34577777776666776666 6665444332222354444321 1111122333333334567777777431
Q ss_pred -hHHHHHHHHHHHCCCCceEecC
Q 029759 148 -KRSMMAATDLLNAVSTHANYPS 169 (188)
Q Consensus 148 -~~a~~a~~~L~~~G~~~v~l~G 169 (188)
.........|...|++-..+.|
T Consensus 90 yg~~~~l~~~l~~~gi~veviPG 112 (264)
T 3ndc_A 90 WSAMGEQLRRLRALNIPYDVTPG 112 (264)
T ss_dssp SCSHHHHHHHHHHTTCCEEEECC
T ss_pred ccHHHHHHHHHHhCCCCEEEeCC
Confidence 2345677778888887445654
No 160
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=23.54 E-value=95 Score=23.13 Aligned_cols=28 Identities=25% Similarity=-0.022 Sum_probs=23.7
Q ss_pred CCcEEEEcCC-ChHHHHHHHHHHHCCCCc
Q 029759 137 HDEIIVGCQS-GKRSMMAATDLLNAVSTH 164 (188)
Q Consensus 137 ~~~ivv~C~s-G~~a~~a~~~L~~~G~~~ 164 (188)
.-.+.++|.| -+||..+-..|.+.||..
T Consensus 9 ~l~~avVCaSN~NRSMEaH~~L~k~G~~V 37 (198)
T 3p9y_A 9 KLAVAVVDSSNMNRSMEAHNFLAKKGFNV 37 (198)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHTTCEE
T ss_pred CceEEEEcCCCCcccHHHHHHHHhCCCce
Confidence 4568899988 489999999999999963
No 161
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=23.37 E-value=2.5e+02 Score=21.78 Aligned_cols=109 Identities=17% Similarity=0.060 Sum_probs=53.0
Q ss_pred CcccCHHHHHHHHhCCCEEEecCChhhHhcCCCC-CeEEcCcccccCCCCCCCHHHHHH-HHhccCCCCcEEEEcCCC--
Q 029759 72 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEE-VSTRFRKHDEIIVGCQSG-- 147 (188)
Q Consensus 72 ~~~i~~~~~~~~l~~~~~iIDvR~~~ef~~ghIp-gAinip~~~~~~~~~~~~~~~l~~-~~~~l~~~~~ivv~C~sG-- 147 (188)
+..++.+.+..+-+.+.++.|.|...+.-. +++ ++..++...... ....+.+.+.+ +......++.|++.+.+.
T Consensus 37 p~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~i~~~k~~~-~~~~~~~~i~~~l~~~~~~G~~Vv~L~~GDP~ 114 (294)
T 2ybo_A 37 PGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESCQRIYVGKRCG-HHSLPQEEINELLVRLARQQRRVVRLKGGDPF 114 (294)
T ss_dssp GGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTSEEEECC---------CHHHHHHHHHHHHHTTCCEEEEEEBCTT
T ss_pred HHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCCeEEecccccc-cccCCHHHHHHHHHHHHHCCCeEEEEcCCCCC
Confidence 345777766666566788888886555433 222 222222110000 00112233332 333334556677775431
Q ss_pred --hHHHHHHHHHHHCCCCceEecCc--HH-hhhhCCCccc
Q 029759 148 --KRSMMAATDLLNAVSTHANYPSK--PL-TWFLSNQLLT 182 (188)
Q Consensus 148 --~~a~~a~~~L~~~G~~~v~l~GG--~~-~W~~~g~p~~ 182 (188)
.+.......|...|++-..+.|= +. .....|.|++
T Consensus 115 i~g~g~~l~~~l~~~gi~vevIPGiSS~~aa~a~~Giplt 154 (294)
T 2ybo_A 115 IFGRGAEELERLLEAGVDCQVVPGVTAASGCSTYAGIPLT 154 (294)
T ss_dssp SSSSHHHHHHHHHHTTCCEEEECCCCHHHHHHHHTTCCSC
T ss_pred ccCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHcCCCcc
Confidence 33556677788888774456652 22 3344466664
No 162
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=22.14 E-value=76 Score=22.88 Aligned_cols=47 Identities=17% Similarity=0.052 Sum_probs=30.7
Q ss_pred HHHHhccCCCCcEEEEcCCC--hHHHHHHHHHHH---CCCCce-EecCcHHhhh
Q 029759 128 EEVSTRFRKHDEIIVGCQSG--KRSMMAATDLLN---AVSTHA-NYPSKPLTWF 175 (188)
Q Consensus 128 ~~~~~~l~~~~~ivv~C~sG--~~a~~a~~~L~~---~G~~~v-~l~GG~~~W~ 175 (188)
+.+...++++..+|+.+-.| .+|...+..|.. .| .++ .+.||-.++.
T Consensus 56 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl~ 108 (163)
T 1o6d_A 56 EDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGLN 108 (163)
T ss_dssp HHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCCC
T ss_pred HHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCCC
Confidence 34455565555577777777 567788877765 47 666 7888865543
No 163
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=22.11 E-value=1.3e+02 Score=19.29 Aligned_cols=28 Identities=11% Similarity=-0.007 Sum_probs=21.9
Q ss_pred CCCcEEEEcCC------ChHHHHHHHHHHHCCCC
Q 029759 136 KHDEIIVGCQS------GKRSMMAATDLLNAVST 163 (188)
Q Consensus 136 ~~~~ivv~C~s------G~~a~~a~~~L~~~G~~ 163 (188)
...+|++|..+ +..+.++-..|...|.+
T Consensus 16 ~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~ 49 (109)
T 3ipz_A 16 NSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVP 49 (109)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCC
T ss_pred ccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCC
Confidence 55678999874 56677888899999876
No 164
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=21.93 E-value=79 Score=29.02 Aligned_cols=37 Identities=19% Similarity=0.144 Sum_probs=32.4
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
+.++++|.|.+-..+...+..|...|+....|.|...
T Consensus 431 ~~~pvLVft~s~~~se~Ls~~L~~~gi~~~vLhg~~~ 467 (844)
T 1tf5_A 431 TGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNH 467 (844)
T ss_dssp HTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCH
T ss_pred cCCcEEEEECCHHHHHHHHHHHHHCCCCEEEeeCCcc
Confidence 4688999999988899999999999999878888754
No 165
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=21.60 E-value=87 Score=24.67 Aligned_cols=26 Identities=19% Similarity=-0.037 Sum_probs=21.8
Q ss_pred ChHHHHHHHHHHHCCCCce-EecCcHH
Q 029759 147 GKRSMMAATDLLNAVSTHA-NYPSKPL 172 (188)
Q Consensus 147 G~~a~~a~~~L~~~G~~~v-~l~GG~~ 172 (188)
|.+-...+..|+.+|..+. +|+||-+
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGgS 244 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGGS 244 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCcc
Confidence 5667889999999999976 8999854
No 166
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=21.08 E-value=1.4e+02 Score=22.32 Aligned_cols=94 Identities=9% Similarity=-0.069 Sum_probs=44.4
Q ss_pred cCHHHHHHHHhCCCEEE-ecCChhhHhcCCCCCeEEcCcccccCCCCCCCHHHHHHHHhccCCCCcEEEEcCCC-----h
Q 029759 75 VPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-----K 148 (188)
Q Consensus 75 i~~~~~~~~l~~~~~iI-DvR~~~ef~~ghIpgAinip~~~~~~~~~~~~~~~l~~~~~~l~~~~~ivv~C~sG-----~ 148 (188)
++.+.+..+-+.+.++. |.|...+.-...-++..-+.. ...........+..+.....+..++.+++.|.+| .
T Consensus 21 lTlrA~~~L~~aDvI~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~G~~Va~ls~~GdP~i~~ 99 (242)
T 1wyz_A 21 LPSYNTEIIRGIRHFIVEDVRSARRFLKKVDREIDIDSL-TFYPLNKHTSPEDISGYLKPLAGGASMGVISEAGCPAVAD 99 (242)
T ss_dssp SCTHHHHHHTTCCEEEESCHHHHHHHHHHHCSSSCTTCC-CCEECCSSCCHHHHHHHHHHHHTTCCEEEECC-------C
T ss_pred cCHHHHHHHHhCCEEEEeCCcchHHHHHhcCCCCceeee-eeecccccCHHHHHHHHHHHHHcCCEEEEEecCCCCcccC
Confidence 56665555555566666 655444432211111110000 0000111122344455555555678899998544 2
Q ss_pred HHHHHHHHHHHCCCCceEecC
Q 029759 149 RSMMAATDLLNAVSTHANYPS 169 (188)
Q Consensus 149 ~a~~a~~~L~~~G~~~v~l~G 169 (188)
+.......+...|++-..+.|
T Consensus 100 ~g~~l~~~l~~~gi~vevIPG 120 (242)
T 1wyz_A 100 PGADVVAIAQRQKLKVIPLVG 120 (242)
T ss_dssp HHHHHHHHHHHTTCCEEECCC
T ss_pred cHHHHHHHHHHCCCCEEEeCc
Confidence 334566677788877445554
No 167
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=20.96 E-value=91 Score=25.41 Aligned_cols=29 Identities=21% Similarity=0.188 Sum_probs=24.2
Q ss_pred CCcEEEEcCCChHHHHHHHHHHHCCCCce
Q 029759 137 HDEIIVGCQSGKRSMMAATDLLNAVSTHA 165 (188)
Q Consensus 137 ~~~ivv~C~sG~~a~~a~~~L~~~G~~~v 165 (188)
.+++++...+|..|..++..|.+.||+.+
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~V~ 37 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYDVI 37 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCcEE
Confidence 45678888889999999999999998854
No 168
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=20.75 E-value=1e+02 Score=25.85 Aligned_cols=52 Identities=10% Similarity=-0.093 Sum_probs=33.2
Q ss_pred HHHHHHHhccCCCCcEEEEcCCChHHHHHHHHHHH--CCCCce-EecCcHHhhhh
Q 029759 125 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLLN--AVSTHA-NYPSKPLTWFL 176 (188)
Q Consensus 125 ~~l~~~~~~l~~~~~ivv~C~sG~~a~~a~~~L~~--~G~~~v-~l~GG~~~W~~ 176 (188)
..+.+.+.+.-+.-.-|++|+||..|..++..|.. -|-+.+ ...|++.+|..
T Consensus 130 ~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~ 184 (454)
T 4ao9_A 130 GRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVL 184 (454)
T ss_dssp HHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTC
T ss_pred HHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccc
Confidence 34555444432344458889999888877766544 255556 68888887654
No 169
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=20.75 E-value=98 Score=28.45 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHH
Q 029759 135 RKHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPL 172 (188)
Q Consensus 135 ~~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~ 172 (188)
.+.+|++|.|.+-..|...+..|...|+....+.|...
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~~~vLnak~~ 476 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFH 476 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCCCEECCTTCH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEecCChh
Confidence 45689999999988899999999999999777877654
No 170
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=20.75 E-value=61 Score=26.58 Aligned_cols=30 Identities=23% Similarity=0.185 Sum_probs=23.7
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCce
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHA 165 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v 165 (188)
+..++++-..+|..|..++..|.+.||+.+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~V~ 45 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQVE 45 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCeEE
Confidence 346777777788999999999999998744
No 171
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=20.30 E-value=2.1e+02 Score=22.55 Aligned_cols=81 Identities=11% Similarity=0.273 Sum_probs=39.4
Q ss_pred CHHHHHHHHhC----CCEEEecCChhhHhcCCCC-CeEEcCcccccCCCCCCCHHHHHHHHh----cc--CCCCcEEEEc
Q 029759 76 PVRVAHELLQA----GHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEEVST----RF--RKHDEIIVGC 144 (188)
Q Consensus 76 ~~~~~~~~l~~----~~~iIDvR~~~ef~~ghIp-gAinip~~~~~~~~~~~~~~~l~~~~~----~l--~~~~~ivv~C 144 (188)
..+.+..++++ ...|++......|...... .-+++|+. +....+.+.+..... .+ +++.+|+|+|
T Consensus 43 ~i~~Vv~~l~~~~~~~~~v~nl~~e~~y~~~~~~~~~~~~~~~----D~~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC 118 (324)
T 1d5r_A 43 NIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFE----DHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHC 118 (324)
T ss_dssp BHHHHHHHHHHHSSSCEEEEEEESSCCCCTTSCSSCEEEEEEC----TTSCCCHHHHHHHHHHHHHHHTTTSCSEEEEEC
T ss_pred CHHHHHHHHHhcCCCcEEEEEcCCCCCCChHHhCCeEEEEeec----CCCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 34555555532 3778888543334432222 23456653 222233333332222 12 3457899999
Q ss_pred CCC-hH-HHHHHHHHHHC
Q 029759 145 QSG-KR-SMMAATDLLNA 160 (188)
Q Consensus 145 ~sG-~~-a~~a~~~L~~~ 160 (188)
..| .| +..++..|...
T Consensus 119 ~aG~gRTGt~ia~yL~~~ 136 (324)
T 1d5r_A 119 KAGKGRTGVMICAYLLHR 136 (324)
T ss_dssp SSSSHHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHHh
Confidence 987 34 33444444443
No 172
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=20.21 E-value=83 Score=27.97 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=31.7
Q ss_pred CCCcEEEEcCCChHHHHHHHHHHHCCCCceEecCcHHh
Q 029759 136 KHDEIIVGCQSGKRSMMAATDLLNAVSTHANYPSKPLT 173 (188)
Q Consensus 136 ~~~~ivv~C~sG~~a~~a~~~L~~~G~~~v~l~GG~~~ 173 (188)
+..+++++|++-..+...+..|+..|+....+.|++..
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~~v~~lHG~l~q 432 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGINAVAYYRGLDV 432 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTCCEEEECTTSCG
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCCcEEEecCCCCH
Confidence 45789999998888889999999999886678887653
Done!