BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029768
(188 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/168 (73%), Positives = 131/168 (77%), Gaps = 14/168 (8%)
Query: 1 MDRYSSYSSGGSRG-VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS SG SRG V RR+DYRVLVTGLPSSASWQDLKDHMRRAGDVCFS+VFRDRGGM
Sbjct: 90 VDRYSR--SGSSRGGVPRRTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGM 147
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP---SRSPYYSRS 116
GIVDYT+YDDMKYAIRKLD SEFRNAFSR+YVRV+EYDSR SYSRSP SR YSRS
Sbjct: 148 AGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRS 207
Query: 117 RSRSPYYSRSRSPSRSWSYSPRSR--------SYSPRGKYSRRSPSLS 156
SRSPY R RS SRS S S S SPR K+SRRS S+S
Sbjct: 208 PSRSPYRGRGRSQSRSRSRSRSRSRSYSGRSTSLSPRHKHSRRSRSVS 255
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 129/157 (82%), Gaps = 3/157 (1%)
Query: 1 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 119
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 120 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLS 156
SPY SRSRS S S SYS RSRS SP+ K+SRRS SLS
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRSFSLS 275
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/157 (75%), Positives = 129/157 (82%), Gaps = 3/157 (1%)
Query: 1 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 90 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 149
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 119
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 150 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 207
Query: 120 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLS 156
SPY SRSRS S S SYS RSRS SP+ K+SRRS SLS
Sbjct: 208 SPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRSFSLS 244
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/163 (76%), Positives = 130/163 (79%), Gaps = 8/163 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT+YDDMK+AI
Sbjct: 143 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKHAI 202
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
+KLD SEFRNAFSRSYVRVREYDSRRSYSRSPS PY RSRS SR+RS W
Sbjct: 203 KKLDDSEFRNAFSRSYVRVREYDSRRSYSRSPSCGPY---DRSRSRSRSRTRSRHSDW-- 257
Query: 136 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSG 178
SRS SP KY RS S+SP RS S RS +GS PRS S G
Sbjct: 258 ---SRSKSPGAKYHSRSLSVSPGRSVSPRSHAGSSPRSSSNLG 297
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 126/153 (82%), Gaps = 3/153 (1%)
Query: 1 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 90 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 149
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 119
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 150 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 207
Query: 120 SPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRS 152
SPY SRSRS S S SYS RSRS SP+ K+SRRS
Sbjct: 208 SPYVSRSRSCSLSHSYSGRSRSLSPKAKHSRRS 240
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/167 (70%), Positives = 125/167 (74%), Gaps = 19/167 (11%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
+DRYS SG SR D+ VLVTGLPSSASWQDLKDHMRRAGDVCFS+VFRDRGGM
Sbjct: 90 VDRYSR--SGSSR------DFAVLVTGLPSSASWQDLKDHMRRAGDVCFSEVFRDRGGMA 141
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP---SRSPYYSRSR 117
GIVDYT+YDDMKYAIRKLD SEFRNAFSR+YVRV+EYDSR SYSRSP SR YSRS
Sbjct: 142 GIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYVRVKEYDSRHSYSRSPSLDSRRSDYSRSP 201
Query: 118 SRSPYYSRSRSPSRSWSYSPRSR--------SYSPRGKYSRRSPSLS 156
SRSPY R RS SRS S S S SPR K+SRRS S+S
Sbjct: 202 SRSPYRGRGRSQSRSRSRSRSRSRSYSGRSTSLSPRHKHSRRSRSVS 248
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 172 bits (435), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 118/144 (81%), Gaps = 3/144 (2%)
Query: 1 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 119
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSR--RSYSRSR 238
Query: 120 SPYYSRSRSPSRSWSYSPRSRSYS 143
SPY SRSRS S S SYS RSR ++
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 118/144 (81%), Gaps = 3/144 (2%)
Query: 1 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 119
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 120 SPYYSRSRSPSRSWSYSPRSRSYS 143
SPY SRSRS S S SYS RSR ++
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 118/144 (81%), Gaps = 3/144 (2%)
Query: 1 MDRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+DRYS +S GSRGVSRRSDYRVLVTGLP SASWQDLKDHMR+AG VCFSQVFR+RGG+
Sbjct: 121 VDRYSRHSGRSGSRGVSRRSDYRVLVTGLPPSASWQDLKDHMRKAGHVCFSQVFRERGGL 180
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR 119
TGIVDYT+YDD+KYAIRKLD SEFRNAFSRSY+RVREYD S S S S SRSR
Sbjct: 181 TGIVDYTNYDDVKYAIRKLDDSEFRNAFSRSYIRVREYDRSHSRSPSRDSRR--SYSRSR 238
Query: 120 SPYYSRSRSPSRSWSYSPRSRSYS 143
SPY SRSRS S S SYS RSR ++
Sbjct: 239 SPYVSRSRSCSLSHSYSGRSRRFT 262
>gi|255542752|ref|XP_002512439.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548400|gb|EEF49891.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 444
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 138/195 (70%), Gaps = 20/195 (10%)
Query: 12 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 71
+ G S+ SD+RVLVTGLPSSASWQDLKDHMR+AGDVCFS+VF RGG TGIVDY +YDDM
Sbjct: 112 NHGPSKHSDHRVLVTGLPSSASWQDLKDHMRQAGDVCFSRVFPGRGGKTGIVDYKNYDDM 171
Query: 72 KYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSR-SPYYSRSRSRSPYYSRSRSPS 130
K+AI+KLD SEFRNAFSRSYVRVR+ DSRRSYS+SPS + S+SRSRS S+SRS S
Sbjct: 172 KHAIKKLDDSEFRNAFSRSYVRVRKDDSRRSYSQSPSHGTRDRSKSRSRSRSGSQSRSRS 231
Query: 131 RSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRS----------------F 174
RS + S RSRS SP KYS RS S+SP RS S S +G PRS F
Sbjct: 232 RSRNCSERSRSKSPGAKYSHRSLSVSPGRSVSPHSHAGLSPRSSSPFIDGLDHYSGAHEF 291
Query: 175 SRSGSF---ARTWGV 186
R G A TWG+
Sbjct: 292 MRVGKIWLCAATWGL 306
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 124/159 (77%), Gaps = 3/159 (1%)
Query: 2 DRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D G T
Sbjct: 117 DRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 176
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 120
GIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR RS S
Sbjct: 177 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS 235
Query: 121 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 159
SRSRS SRS SRS SP+GK S+RSP+ SPA+
Sbjct: 236 RSRSRSRSHSRS-YSPGHSRSKSPKGKSSQRSPAKSPAK 273
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/159 (64%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Query: 2 DRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D G T
Sbjct: 117 DRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 176
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 120
GIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR RS S
Sbjct: 177 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS 235
Query: 121 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 159
SRS SP+GK S+RSP+ SPA+
Sbjct: 236 -RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 273
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/159 (64%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Query: 2 DRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D G T
Sbjct: 64 DRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 123
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 120
GIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR RS S
Sbjct: 124 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS 182
Query: 121 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 159
SRS SP+GK S+RSP+ SPA+
Sbjct: 183 -RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 220
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 84/98 (85%), Positives = 89/98 (90%), Gaps = 2/98 (2%)
Query: 2 DRYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
DRYSSYSS G R GVSRRS+YRVLV+GLPSSASWQDLKDHMRRAGDVCFSQVFRD G
Sbjct: 91 DRYSSYSSAGGRSGGVSRRSEYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDSSGT 150
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 97
TGIVDYT+YDDMKYAIRKLD SEFRNAFSR Y+RV+EY
Sbjct: 151 TGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEY 188
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/159 (64%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Query: 2 DRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D G T
Sbjct: 192 DRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 251
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 120
GIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR RS S
Sbjct: 252 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS 310
Query: 121 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 159
SRS SP+GK S+RSP+ SPA+
Sbjct: 311 -RSRSRSRSHSRSYSPGHSRSKSPKGKSSQRSPAKSPAK 348
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 124/159 (77%), Gaps = 3/159 (1%)
Query: 2 DRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSS+S+G R +YRV+V GLPSSASWQDLKDHMR+AGDVCFSQVF D G T
Sbjct: 117 DRYSSHSNGRGGRGVSRRSEYRVIVNGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 176
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 120
GIVDYT+YDDMKYAI+KLD SEFRNAFS+SYVRVREYDSRR SRSP R P +SR RS S
Sbjct: 177 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKSYVRVREYDSRRD-SRSPGRGPSHSRGRSYS 235
Query: 121 PYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPAR 159
SRSRS SRS SRS SP+GK S+RSP+ SPA+
Sbjct: 236 RSRSRSRSHSRS-YSPGHSRSKSPKGKSSQRSPAKSPAK 273
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 82/88 (93%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+YDDMKYAI+KLD
Sbjct: 110 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLD 169
Query: 80 RSEFRNAFSRSYVRVREYDSRRSYSRSP 107
SEFRNAFSR+YVRVREYDS+R SRSP
Sbjct: 170 DSEFRNAFSRAYVRVREYDSKRDLSRSP 197
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 88/94 (93%), Gaps = 1/94 (1%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VS+ S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIV+YT+Y+DMKYA
Sbjct: 103 VSKHSEYRVLVTGLPPSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYA 162
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
IRKLD SEFRNAFS +Y+RVREYD RR Y+RSPS
Sbjct: 163 IRKLDDSEFRNAFSWAYIRVREYD-RRRYTRSPS 195
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 104/146 (71%), Gaps = 20/146 (13%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
DR SYSSG GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G G
Sbjct: 280 DRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVG 339
Query: 62 IVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR--------------------R 101
IVDYT+Y+DMKYAIRKLD SEFRNAFSR+Y+RVREYD R +
Sbjct: 340 IVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVREYDDRSRSRSRSYSRSRSYSRSRSPK 399
Query: 102 SYSRSPSRSPYYSRSRSRSPYYSRSR 127
S SRSPS S SRSR+P S SR
Sbjct: 400 SVSRSPSPVDERSISRSRTPVSSPSR 425
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/84 (91%), Positives = 82/84 (97%)
Query: 13 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 72
RG S+RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT+YDDMK
Sbjct: 102 RGPSKRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMK 161
Query: 73 YAIRKLDRSEFRNAFSRSYVRVRE 96
YAI+KLD SEFRNAFSR+Y+RVRE
Sbjct: 162 YAIKKLDDSEFRNAFSRAYIRVRE 185
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/138 (68%), Positives = 109/138 (78%), Gaps = 9/138 (6%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+
Sbjct: 98 AGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYE 157
Query: 70 DMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY------ 123
DMK+AIRKLD SEFRNAFSR+Y+RVREYD+RR SRS S+SP +RS SRSP
Sbjct: 158 DMKHAIRKLDDSEFRNAFSRTYIRVREYDARR--SRSQSKSPVKARSPSRSPPVSPPRDK 215
Query: 124 SRSRSPSRSWSYSPRSRS 141
S SRSP+RS S PRS S
Sbjct: 216 SISRSPARSKSL-PRSCS 232
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/82 (90%), Positives = 80/82 (97%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+ SDYRVLV+GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT+YDDMKYAI+
Sbjct: 106 KHSDYRVLVSGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIK 165
Query: 77 KLDRSEFRNAFSRSYVRVREYD 98
KLD SEFRNAFSR+Y+RVREYD
Sbjct: 166 KLDDSEFRNAFSRAYIRVREYD 187
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 88/99 (88%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRV+VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+Y+DMKYAI+K+D
Sbjct: 109 EYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKID 168
Query: 80 RSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRS 118
SEFRNAFS++YVRVREYDS+R SRSP R +SR R+
Sbjct: 169 DSEFRNAFSQAYVRVREYDSKRDSSRSPGRDRSHSRGRN 207
>gi|222618302|gb|EEE54434.1| hypothetical protein OsJ_01505 [Oryza sativa Japonica Group]
Length = 270
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/115 (73%), Positives = 94/115 (81%), Gaps = 3/115 (2%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
DR SYSSG GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G G
Sbjct: 140 DRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVG 199
Query: 62 IVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRS 116
IVDYT+Y+DMKYAIRKLD SEFRNAFSR+Y+RVRE SR SR+P SP RS
Sbjct: 200 IVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVRESISR---SRTPVSSPSRGRS 251
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLVTGLPSSASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLD 169
Query: 80 RSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS 139
SEFRNAFS+ YVRVREYDSRR SRSPS P +SR RS RS
Sbjct: 170 DSEFRNAFSKGYVRVREYDSRRDSSRSPSHGPSHSRGRS-----YSRSRSRSHSYSRDRS 224
Query: 140 RSYSPRGKYSRRSPSLSPARSASQRSPS 167
+S SP+GK S+RSP+ SP +SQRSP+
Sbjct: 225 QSKSPKGKSSQRSPAKSPKGKSSQRSPA 252
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLVTGLPSSASWQDLKDHMR+AGDVCFSQVF D G TGIVDYT+YDDMKYAI+KLD
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLD 169
Query: 80 RSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPRS 139
SEFRNAFS+ YVRVREYDSRR SRSPS P +SR RS RS
Sbjct: 170 DSEFRNAFSKGYVRVREYDSRRDSSRSPSHGPSHSRGRS-----YSRSRSRSHSYSRDRS 224
Query: 140 RSYSPRGKYSRRSPSLSPARSASQRSPS 167
+S SP+GK S+RSP+ SP +SQRSP+
Sbjct: 225 QSKSPKGKSSQRSPAKSPKGKSSQRSPA 252
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/94 (81%), Positives = 85/94 (90%)
Query: 6 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY 65
SYSSG GVSRRS+YRVLV GLPSSASWQDLKDHMRRAGDVCFS V+R+ G + GIVDY
Sbjct: 95 SYSSGRRGGVSRRSEYRVLVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGAIVGIVDY 154
Query: 66 TSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
T+YDDMKYAIRKLD +EFRNAFSRSY+RVREYD+
Sbjct: 155 TNYDDMKYAIRKLDGTEFRNAFSRSYIRVREYDA 188
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/98 (80%), Positives = 90/98 (91%), Gaps = 1/98 (1%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
GSR SRRS YRVLVTGLP SASWQDLKDHMR+AGDVCFS+VFRDRG M+G+VDY++YDD
Sbjct: 99 GSRAPSRRSAYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFRDRGRMSGVVDYSNYDD 158
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
MKYAIRKLD +EFRNAFSR+Y+RVREY+S RS SRSP+
Sbjct: 159 MKYAIRKLDDTEFRNAFSRAYIRVREYES-RSVSRSPN 195
>gi|115436242|ref|NP_001042879.1| Os01g0316600 [Oryza sativa Japonica Group]
gi|113532410|dbj|BAF04793.1| Os01g0316600, partial [Oryza sativa Japonica Group]
Length = 178
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/97 (80%), Positives = 86/97 (88%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
DR SYSSG GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G G
Sbjct: 40 DRPRSYSSGRRGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVG 99
Query: 62 IVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 98
IVDYT+Y+DMKYAIRKLD SEFRNAFSR+Y+RVREYD
Sbjct: 100 IVDYTTYEDMKYAIRKLDDSEFRNAFSRAYIRVREYD 136
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 100/126 (79%), Gaps = 8/126 (6%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 106 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 165
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSW 133
AIRKLD S+FRNAFSR+Y+RVREYD+R S S SR+P YSRSRSP +S
Sbjct: 166 AIRKLDDSQFRNAFSRAYIRVREYDARSRSRSR-------SHSYSRTPSYSRSRSP-KSV 217
Query: 134 SYSPRS 139
S SP S
Sbjct: 218 SQSPSS 223
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 87/98 (88%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
DR SS+SSG GVSRRS+YRV+V GLPSSASWQDLKDHMRRAGDVCFS V+R+ G G
Sbjct: 91 DRPSSFSSGRRGGVSRRSEYRVMVDGLPSSASWQDLKDHMRRAGDVCFSDVYREAGATVG 150
Query: 62 IVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
IVDYT+YDDMKYAIRKLD +EFRNAFSR+Y+RVREYD+
Sbjct: 151 IVDYTNYDDMKYAIRKLDGTEFRNAFSRAYIRVREYDA 188
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 79/85 (92%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+SR S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFR RGGMTGIVDYT+YDDMKY
Sbjct: 103 GLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD S F+N FSR+Y+RVREY+
Sbjct: 163 AIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 79/85 (92%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+SR S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFR RGGMTGIVDYT+YDDMKY
Sbjct: 103 GLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD S F+N FSR+Y+RVREY+
Sbjct: 163 AIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 87/99 (87%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATI 147
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y+RVREYDS
Sbjct: 148 GIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDS 186
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/79 (89%), Positives = 77/79 (97%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
DYRVLVTGLP SASWQDLKDHMR+AGDVCFSQVFR+RGGMTGIVDYT+YDDMKYAIRKLD
Sbjct: 110 DYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLD 169
Query: 80 RSEFRNAFSRSYVRVREYD 98
SEFRNAFSR+++RVREYD
Sbjct: 170 DSEFRNAFSRAFIRVREYD 188
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 87/99 (87%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 111 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATI 170
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y+RVREYDS
Sbjct: 171 GIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDS 209
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/85 (84%), Positives = 79/85 (92%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+SR S+YRVLVTGLP SASWQDLKDHMRRAGDVCFSQVFR RGGMTGIVDYT+YDDMKY
Sbjct: 103 GLSRHSEYRVLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD S F+N FSR+Y+RVREY+
Sbjct: 163 AIRKLDDSLFKNQFSRAYIRVREYE 187
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/99 (77%), Positives = 87/99 (87%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGATI 147
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
GIVDYT+Y+DMK AIRKLD SEFRNAFSR+Y+RVREYDS
Sbjct: 148 GIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYIRVREYDS 186
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 86/96 (89%), Gaps = 3/96 (3%)
Query: 2 DRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSSY GGS VSRRS+YRV++TGLPSSASWQDLKDHMRRAGDVCF+QVFR+ G T
Sbjct: 89 DRYSSYGGRGGS--VSRRSEYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGTT 146
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 96
GIVD+T+YDDMKYAI+KLD SEFRN FSRSY+RV+E
Sbjct: 147 GIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVKE 182
>gi|226496385|ref|NP_001151386.1| LOC100285019 [Zea mays]
gi|195646352|gb|ACG42644.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 275
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+D
Sbjct: 98 GQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYED 157
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
MK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 158 MKHAIRKLDDSEFRNAFSRTYVRVREYDA 186
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+D
Sbjct: 99 GQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYED 158
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
MK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 159 MKHAIRKLDDSEFRNAFSRTYVRVREYDA 187
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 106 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 165
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 166 AIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 106 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 165
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 166 AIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|52140014|gb|AAU29335.1| ASF/SF2-like pre-mRNA splicing factor SRP31'' [Zea mays]
gi|224035263|gb|ACN36707.1| unknown [Zea mays]
gi|413944990|gb|AFW77639.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 284
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+D
Sbjct: 107 GQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYED 166
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
MK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 167 MKHAIRKLDDSEFRNAFSRTYVRVREYDA 195
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/96 (79%), Positives = 86/96 (89%), Gaps = 3/96 (3%)
Query: 2 DRYSSYSS-GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYSSY GGS VSRRS+YRV++TGLPSSASWQDLKDHMRRAGDVCF+QVFR+ G T
Sbjct: 87 DRYSSYGGRGGS--VSRRSEYRVIITGLPSSASWQDLKDHMRRAGDVCFAQVFREGNGTT 144
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 96
GIVD+T+YDDMKYAI+KLD SEFRN FSRSY+RV+E
Sbjct: 145 GIVDFTNYDDMKYAIKKLDDSEFRNPFSRSYIRVKE 180
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/93 (80%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAI
Sbjct: 104 SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAI 163
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
RKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 164 RKLDATEFRNAFSSAYIRVREYES-RSVSRSPD 195
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 86/99 (86%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR +SY+S G RG RRSDYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+ G +T
Sbjct: 88 FDRPNSYTSSGRRGALRRSDYRVIVTGLPSSASWQDLKDHMRRAGDVCFSDVYPGAGAIT 147
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
GIV++ +Y+DMK+AIRKLD SEFRNAFSR+Y+RVREY++
Sbjct: 148 GIVEFPNYEDMKHAIRKLDDSEFRNAFSRTYIRVREYNA 186
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/93 (80%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAI
Sbjct: 104 SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAI 163
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
RKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 164 RKLDATEFRNAFSSAYIRVREYES-RSVSRSPD 195
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 106 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 165
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 166 AIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 118 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 177
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
+KLD +EFRNAFS YVRVREYDSR+ SRSPS
Sbjct: 178 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPS-----RGRSYSKSRSRSRGRSVSRSRS 231
Query: 136 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 170
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 232 RSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 114 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 173
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
+KLD +EFRNAFS YVRVREYDSR+ SRSPS
Sbjct: 174 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPS-----RGRSYSKSRSRSRGRSVSRSRS 227
Query: 136 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 170
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 228 RSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 80/90 (88%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+
Sbjct: 98 AGQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYE 157
Query: 70 DMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
DMK+AIRKLD SEFRNAFSR+Y+RVREYD+
Sbjct: 158 DMKHAIRKLDDSEFRNAFSRTYIRVREYDA 187
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 114 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 173
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
+KLD +EFRNAFS YVRVREYDSR+ SRSPS
Sbjct: 174 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPS-----RGRSYSKSRSRSRGRSVSRSRS 227
Query: 136 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 170
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 228 RSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 262
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 118 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 177
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
+KLD +EFRNAFS YVRVREYDSR+ SRSPS
Sbjct: 178 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPS-----RGRSYSKSRSRSRGRSVSRSRS 231
Query: 136 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 170
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 232 RSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 110/155 (70%), Gaps = 6/155 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 118 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 177
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
+KLD +EFRNAFS YVRVREYDSR+ SRSP RS S+S
Sbjct: 178 KKLDDTEFRNAFSNGYVRVREYDSRKD-----SRSPSRGRSYSKS-RSRSRGRSVSRSRS 231
Query: 136 SPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSP 170
RSRS SP+ K SRRSP+ S +RS RS S SP
Sbjct: 232 RSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSP 266
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 87/98 (88%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR S++ GG RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 91 FDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTV 150
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 98
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ ++RV+EYD
Sbjct: 151 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYD 188
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 103 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 163 AIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/93 (80%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRSDYRVLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAI
Sbjct: 104 SRRSDYRVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAI 163
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
RKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 164 RKLDATEFRNAFSSAYIRVREYES-RSVSRSPD 195
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 86/103 (83%), Gaps = 3/103 (2%)
Query: 1 MDRYSSYSSGGSRGVSR---RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 57
+DRYSS+SSGG R R DYRV ++GLPSSASWQDLKDHMRRAGDV F+QVFRD
Sbjct: 89 VDRYSSFSSGGGRRNGRLQSHCDYRVTISGLPSSASWQDLKDHMRRAGDVTFAQVFRDSN 148
Query: 58 GMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 100
G TG+VDYT+YDDMKYAIRKLD +EF+N FSRSY+RV+EY S+
Sbjct: 149 GTTGVVDYTNYDDMKYAIRKLDDTEFKNPFSRSYIRVKEYGSK 191
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+D
Sbjct: 99 GQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYED 158
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
MK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 159 MKHAIRKLDDSEFRNAFSRTYVRVREYDA 187
>gi|21954085|gb|AAK93589.2| putative SF2/ASF splicing modulator Srp30 protein [Arabidopsis
thaliana]
Length = 207
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 84/92 (91%), Gaps = 1/92 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRSDY VLVTGLP SASWQDLKDHMR+AGDVCFS+VF DR GM+G+VDY++YDDMKYAI
Sbjct: 43 SRRSDYHVLVTGLPPSASWQDLKDHMRKAGDVCFSEVFPDRKGMSGVVDYSNYDDMKYAI 102
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 107
RKLD +EFRNAFS +Y+RVREY+S RS SRSP
Sbjct: 103 RKLDATEFRNAFSSAYIRVREYES-RSVSRSP 133
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 103 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 163 AIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 80/89 (89%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+D
Sbjct: 99 GQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYED 158
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
MK+AIRKLD SEFRNAFSR+YVRVREYD+
Sbjct: 159 MKHAIRKLDDSEFRNAFSRTYVRVREYDA 187
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/100 (74%), Positives = 88/100 (88%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR S++ GG RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 91 FDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTV 150
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 100
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ ++RV+EYD +
Sbjct: 151 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYDGK 190
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 106 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 165
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 166 AIRKLDDSQFRNAFSRAYIRVREYDA 191
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 103 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 163 AIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/89 (77%), Positives = 80/89 (89%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G RG S+RSDYRV+VTGLPSSASWQDLKDHMRRAGDVCF+ V+R+ G GI DYT+Y+D
Sbjct: 99 GQRGASKRSDYRVMVTGLPSSASWQDLKDHMRRAGDVCFTDVYREAGATIGIADYTNYED 158
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
MK+AIRKLD SEFRNAFSR+Y+RVREYD+
Sbjct: 159 MKHAIRKLDDSEFRNAFSRTYIRVREYDA 187
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/86 (82%), Positives = 80/86 (93%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 103 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDS 99
AIRKLD S+FRNAFSR+Y+RVREYD+
Sbjct: 163 AIRKLDDSQFRNAFSRAYIRVREYDA 188
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 114 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 173
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 107
+KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 174 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 74/79 (93%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF D GG GIVDYT+YDDMK+AIRKLD
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLD 169
Query: 80 RSEFRNAFSRSYVRVREYD 98
SEFRNAFSR+YVRV+EYD
Sbjct: 170 DSEFRNAFSRAYVRVKEYD 188
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 118 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 177
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 107
+KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 178 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 208
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 74/79 (93%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF D GG GIVDYT+YDDMK+AIRKLD
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLD 169
Query: 80 RSEFRNAFSRSYVRVREYD 98
SEFRNAFSR+YVRV+EYD
Sbjct: 170 DSEFRNAFSRAYVRVKEYD 188
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 79/85 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR +DYRVLVTGLPSSASWQDLKDHMRRAGDVCFS+V+R+ G TGIVDYT+YDDMKYA
Sbjct: 111 VSRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYA 170
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDS 99
I+KLD +EF+NAFS+ Y+RV+EYD+
Sbjct: 171 IKKLDDTEFKNAFSKGYIRVKEYDA 195
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 74/79 (93%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF D GG GIVDYT+YDDMK+AIRKLD
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLD 169
Query: 80 RSEFRNAFSRSYVRVREYD 98
SEFRNAFSR+YVRV+EYD
Sbjct: 170 DSEFRNAFSRAYVRVKEYD 188
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/99 (74%), Positives = 87/99 (87%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR S++ GG RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 91 FDRPSNFGGGGRRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTV 150
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDS 99
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ ++RV+EYD
Sbjct: 151 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKGHIRVKEYDG 189
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 81/93 (87%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 118 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 177
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
+KLD +EFRNAFS YVRVREYDSR+ R+ +
Sbjct: 178 KKLDDTEFRNAFSNGYVRVREYDSRKDSRRAEA 210
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 78/84 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYA
Sbjct: 168 VSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYA 227
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD 98
IRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 228 IRKLDDSEFKNAFSKAYIRVKEYD 251
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 84/94 (89%), Gaps = 1/94 (1%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
+DR ++ S G + GVSRRS+YRV+VTGLPSSASWQDLKDHMRRAGDVCF+QVFRD G M
Sbjct: 90 VDRSAAESGGRAGGVSRRSEYRVMVTGLPSSASWQDLKDHMRRAGDVCFAQVFRDAGTM- 148
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 94
GIVD+T+YDDMKYAIRKLD SEFRN FSRS++RV
Sbjct: 149 GIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 182
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 78/84 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYA
Sbjct: 102 VSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYA 161
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD 98
IRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 162 IRKLDDSEFKNAFSKAYIRVKEYD 185
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/86 (79%), Positives = 78/86 (90%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 118 SRRSEFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDGRGTTGVVDYTCYEDMKYAV 177
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRR 101
+KLD +EFRNAFS YVRVREYDSR+
Sbjct: 178 KKLDDTEFRNAFSHGYVRVREYDSRK 203
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 77/84 (91%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYAI+K
Sbjct: 109 HSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKK 168
Query: 78 LDRSEFRNAFSRSYVRVREYDSRR 101
LD +EFRNAF R+Y+RV+EY+ +R
Sbjct: 169 LDDTEFRNAFGRAYIRVKEYNGKR 192
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 78/84 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYA
Sbjct: 102 VSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYA 161
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD 98
IRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 162 IRKLDDSEFKNAFSKAYIRVKEYD 185
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 75/79 (94%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+Y+DMK+AI+KLD
Sbjct: 109 EYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIKKLD 168
Query: 80 RSEFRNAFSRSYVRVREYD 98
SEFRNAFSR+YVRV+EYD
Sbjct: 169 DSEFRNAFSRAYVRVKEYD 187
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 77/83 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ G TGIVDYT+YDDMKYA
Sbjct: 107 VSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGDGTTGIVDYTNYDDMKYA 166
Query: 75 IRKLDRSEFRNAFSRSYVRVREY 97
IRKLD SEFRNAFSR+ +RV+EY
Sbjct: 167 IRKLDDSEFRNAFSRAPIRVKEY 189
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 77/83 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYA
Sbjct: 103 VSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYA 162
Query: 75 IRKLDRSEFRNAFSRSYVRVREY 97
IRKLD +EF+NAFSR+ +RV+EY
Sbjct: 163 IRKLDDTEFKNAFSRAPIRVKEY 185
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 77/83 (92%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG GIVDYT+YDDMKYA
Sbjct: 103 VSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYA 162
Query: 75 IRKLDRSEFRNAFSRSYVRVREY 97
IRKLD +EF+NAFSR+ +RV+EY
Sbjct: 163 IRKLDDTEFKNAFSRAPIRVKEY 185
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/81 (77%), Positives = 74/81 (91%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
+DYRVLVTGLPSSASWQDLKDHMRRAGDVCFS+V+R+ GG GI DYT+YDDMKYAI+K
Sbjct: 115 HTDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYAIKK 174
Query: 78 LDRSEFRNAFSRSYVRVREYD 98
LD +EF+NAFS+ Y+RV+EYD
Sbjct: 175 LDDTEFKNAFSKGYIRVKEYD 195
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 82/97 (84%), Gaps = 1/97 (1%)
Query: 2 DRYSSYSSGGSRGVSRRS-DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRY+S+S+G R +YRVLV+GLPSSASWQDLKDHMR+AGDVCFSQVF D G T
Sbjct: 91 DRYNSHSNGRGGRGVSRRSEYRVLVSGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 150
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 97
GIVDYT+YDDMKYAI+KLD SEFRNAFS+ YVRVREY
Sbjct: 151 GIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREY 187
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 75/83 (90%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
V+R +DYRVLVTGLPSSASWQDLKDHMRRAGDVC+++VFRD G G VDYT+ +DMKYA
Sbjct: 109 VTRHTDYRVLVTGLPSSASWQDLKDHMRRAGDVCYAEVFRDSNGTRGTVDYTNLEDMKYA 168
Query: 75 IRKLDRSEFRNAFSRSYVRVREY 97
IRKLD SEFRNAFSRSY++V+EY
Sbjct: 169 IRKLDDSEFRNAFSRSYIQVKEY 191
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLVT L SSASWQDLKDH+ + GDVCFSQV+RD G TG+VDYT Y+DMKYA+
Sbjct: 114 SRRSEFRVLVTWLASSASWQDLKDHIAKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYAL 173
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSP 107
+KLD +EFRNAFS YVRVREYDSR+ SRSP
Sbjct: 174 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSP 204
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 82/108 (75%), Gaps = 14/108 (12%)
Query: 1 MDRYSSY-------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDV 47
+DRYS Y G + GVSRRS+YRV VTGLPSSASWQDLKDHMRRAGDV
Sbjct: 90 VDRYSIYSSGGRGGGGSAADCGGRAGGVSRRSEYRVTVTGLPSSASWQDLKDHMRRAGDV 149
Query: 48 CFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 94
CF+QVFRD G GIVD+T+YDDMKYAIRKLD SEFRN FSRS++RV
Sbjct: 150 CFAQVFRDGTSGTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV 197
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Query: 2 D--RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
D G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 91 DRSSGFGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT 150
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRR 101
GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EY+ +R
Sbjct: 151 VGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKR 192
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 73/82 (89%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSRRS+YRV+VTGLPSSASWQDLKDHMR AGDVCF+QVFR+ G GIVD+T+YDDMK A
Sbjct: 115 VSRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNA 174
Query: 75 IRKLDRSEFRNAFSRSYVRVRE 96
IRKLD +EFRN FS SY+RVRE
Sbjct: 175 IRKLDDTEFRNPFSHSYIRVRE 196
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 73/82 (89%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSRRS+YRV+VTGLPSSASWQDLKDHMR AGDVCF+QVFR+ G GIVD+T+YDDMK A
Sbjct: 115 VSRRSEYRVVVTGLPSSASWQDLKDHMRTAGDVCFAQVFRESNGTRGIVDFTNYDDMKNA 174
Query: 75 IRKLDRSEFRNAFSRSYVRVRE 96
IRKLD +EFRN FS SY+RVRE
Sbjct: 175 IRKLDDTEFRNPFSHSYIRVRE 196
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 2 D--RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
D G RGVSR S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 91 DRSSGFGGGGGARRGVSRHSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGT 150
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRS 102
GIVDYT+YDDMKYAI+KLD +EFRNAF R+Y+RV+EY+ +R
Sbjct: 151 VGIVDYTNYDDMKYAIKKLDDTEFRNAFGRAYIRVKEYNGKRG 193
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 5 SSY-SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIV 63
+S+ G GVSR ++YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ G GIV
Sbjct: 92 NSHGGGGRRGGVSRHTEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREVVGTIGIV 151
Query: 64 DYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREY 97
DYT+YDDMKYAIRKLD +EF+NAFSR+ +RV+EY
Sbjct: 152 DYTNYDDMKYAIRKLDDTEFKNAFSRAPIRVKEY 185
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 92/139 (66%), Gaps = 30/139 (21%)
Query: 1 MDRYSSY--------------SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGD 46
+DRYS Y + G + GVSRRS+YRV VTGLPSSASWQDLKDHMRRAGD
Sbjct: 91 VDRYSIYSSGGGRGGGGSASENGGRAGGVSRRSEYRVTVTGLPSSASWQDLKDHMRRAGD 150
Query: 47 VCFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSR 105
VCF+QVFRD G GIVD+T+YDDMKYAIRKLD SEFRN FSRS++RV
Sbjct: 151 VCFAQVFRDGSAGTMGIVDFTNYDDMKYAIRKLDDSEFRNPFSRSFIRV----------- 199
Query: 106 SPSRSPYYSRSRSRSPYYS 124
++SRSRS Y+
Sbjct: 200 ----CLCVTKSRSRSRRYT 214
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 77/88 (87%), Gaps = 4/88 (4%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR AGDVC+S+V+R+ GG GIVDYT+YDDMKYA
Sbjct: 168 VSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYA 227
Query: 75 IRKLDRSEFRNAFSRSYVRVR--EYDSR 100
IRKLD SEF+NAFS++Y +R EYD +
Sbjct: 228 IRKLDDSEFKNAFSKAY--IRVKEYDGK 253
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 76/85 (89%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 223 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKY 282
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 283 AIRKLDDTEFRNPWARSYIRVRKYE 307
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/78 (80%), Positives = 71/78 (91%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYAI
Sbjct: 115 SRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAI 174
Query: 76 RKLDRSEFRNAFSRSYVR 93
+KLD +EFRNAFS YVR
Sbjct: 175 KKLDDTEFRNAFSHGYVR 192
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 71/79 (89%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 103 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 162
Query: 74 AIRKLDRSEFRNAFSRSYV 92
AIRKLD S+FRNAFSR +
Sbjct: 163 AIRKLDDSQFRNAFSRCSI 181
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 76/85 (89%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 116 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKY 175
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 176 AIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 76/85 (89%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 116 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKY 175
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++RSY+RVR+Y+
Sbjct: 176 AIRKLDDTEFRNPWARSYIRVRKYE 200
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 70/80 (87%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
R + YRV+V GLP+SASWQDLKDHMRRAGDVCFSQV+R G G+VDYTSY+DMKYAIR
Sbjct: 105 RSTGYRVIVHGLPTSASWQDLKDHMRRAGDVCFSQVYRKGSGTVGVVDYTSYEDMKYAIR 164
Query: 77 KLDRSEFRNAFSRSYVRVRE 96
KLD SEFRN FSRSY+RVRE
Sbjct: 165 KLDDSEFRNPFSRSYIRVRE 184
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 73/83 (87%), Gaps = 3/83 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYA
Sbjct: 115 SRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYA- 173
Query: 76 RKLDRSEFRNAFSRSYVRVREYD 98
LD +EFRNAFS YVRVREYD
Sbjct: 174 --LDDTEFRNAFSHEYVRVREYD 194
>gi|297816162|ref|XP_002875964.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
gi|297321802|gb|EFH52223.1| hypothetical protein ARALYDRAFT_906222 [Arabidopsis lyrata subsp.
lyrata]
Length = 301
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 75/85 (88%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 116 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKY 175
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++R ++RV++Y+
Sbjct: 176 AIRKLDDTEFRNPWARGFIRVKKYE 200
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 75/85 (88%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 115 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKY 174
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++R ++RV++Y+
Sbjct: 175 AIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 75/85 (88%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 115 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKY 174
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++R ++RV++Y+
Sbjct: 175 AIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 89/127 (70%), Gaps = 22/127 (17%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+Y+DMKYA
Sbjct: 111 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYA 170
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD--------------------SRRSYSRSPSRSPYYS 114
IRKLD +EFRN ++R+Y+RV+ Y+ +S RSPSRS S
Sbjct: 171 IRKLDDTEFRNPWARAYIRVKMYENSPSRSRSRSRSRSRSPRRNRSKSLERSPSRS--VS 228
Query: 115 RSRSRSP 121
+SRS SP
Sbjct: 229 KSRSASP 235
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 75/85 (88%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 115 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKY 174
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EFRN ++R ++RV++Y+
Sbjct: 175 AIRKLDDTEFRNPWARGFIRVKKYE 199
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 75/84 (89%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYA
Sbjct: 110 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 169
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD 98
IRKLD +EFRN ++R+Y+RVR+Y+
Sbjct: 170 IRKLDDAEFRNPWARAYIRVRKYE 193
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 74/87 (85%), Gaps = 6/87 (6%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY---TSYDDMKYA 74
S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG GI T+YDDMKYA
Sbjct: 110 HSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGI---VDYTNYDDMKYA 166
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRR 101
I+KLD +EFRNAF R+Y+RV+EYD +R
Sbjct: 167 IKKLDDTEFRNAFGRAYIRVKEYDGKR 193
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 76/85 (89%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+++DMKY
Sbjct: 117 GISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKY 176
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
AIRKLD +EF+N ++R+Y+RV++Y+
Sbjct: 177 AIRKLDDTEFKNPWARAYIRVKQYE 201
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 74/84 (88%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYA
Sbjct: 110 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKYA 169
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD 98
IRKLD +EFRN ++ +Y+RVR+Y+
Sbjct: 170 IRKLDDTEFRNPWAIAYIRVRKYE 193
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 71/80 (88%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
SDYRV++ GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+Y+DMKYAIRK
Sbjct: 114 HSDYRVIIRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKYAIRK 173
Query: 78 LDRSEFRNAFSRSYVRVREY 97
LD +EFRN ++R+Y+RVREY
Sbjct: 174 LDDTEFRNPWTRTYIRVREY 193
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 74/87 (85%), Gaps = 6/87 (6%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY---TSYDDMKYA 74
S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG GI T+YDDMKYA
Sbjct: 110 HSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGI---VDYTNYDDMKYA 166
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRR 101
I+KLD +EFRNAF R+Y+RV+EYD +R
Sbjct: 167 IKKLDDTEFRNAFGRAYIRVKEYDGKR 193
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 75/84 (89%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+++DMKYA
Sbjct: 107 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYA 166
Query: 75 IRKLDRSEFRNAFSRSYVRVREYD 98
IRKLD +EFRN ++R+Y+RV++++
Sbjct: 167 IRKLDDTEFRNPWARAYIRVKQHE 190
>gi|357442431|ref|XP_003591493.1| Serine/arginine-rich splicing factor [Medicago truncatula]
gi|355480541|gb|AES61744.1| Serine/arginine-rich splicing factor [Medicago truncatula]
Length = 390
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Query: 2 DRYSSYSSG-GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DRYS +S+G G RGVS S+YRVLV LPSSAS QDLKDHMR+AG VCFSQV D T
Sbjct: 144 DRYSIHSNGQGGRGVSSHSEYRVLVNRLPSSASCQDLKDHMRKAGAVCFSQVVHDGRVTT 203
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 96
GIVDYT+ DDMKYAI+ LD SEF+NAFSR + E
Sbjct: 204 GIVDYTNCDDMKYAIKNLDGSEFQNAFSRMDNLIME 239
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 71/80 (88%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S+YRV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+++DMKYAIRKL
Sbjct: 110 SEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAIRKL 169
Query: 79 DRSEFRNAFSRSYVRVREYD 98
D +EFRN ++R+Y+RV+ YD
Sbjct: 170 DDTEFRNPWARAYIRVKRYD 189
>gi|449529130|ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 158
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 67/75 (89%)
Query: 24 LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EF
Sbjct: 1 IVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEF 60
Query: 84 RNAFSRSYVRVREYD 98
RN ++R+Y+RV++YD
Sbjct: 61 RNPWARAYIRVKKYD 75
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 59/60 (98%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
DYRVLVTGLP SASWQDLKDHMR+AGDVCFSQVFR+RGGMTGIVDYT+YDDMKYA+RKLD
Sbjct: 110 DYRVLVTGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYALRKLD 169
>gi|357511861|ref|XP_003626219.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501234|gb|AES82437.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 168
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/68 (85%), Positives = 64/68 (94%), Gaps = 1/68 (1%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYDSR 100
MRRAGDVCFSQVFRDRGGMTGIV+YT+Y+DMKYAIRKLD SEFRNAFS +Y+RVREYD R
Sbjct: 1 MRRAGDVCFSQVFRDRGGMTGIVEYTNYEDMKYAIRKLDDSEFRNAFSWAYIRVREYD-R 59
Query: 101 RSYSRSPS 108
R Y+RSPS
Sbjct: 60 RRYTRSPS 67
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 6/122 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR++YRV+V+GLP+S SWQDLKDHMR AGDVC++ V RD TGIV+Y Y+DMKYA+R
Sbjct: 112 RRANYRVIVSGLPASGSWQDLKDHMREAGDVCYTDVLRD---GTGIVEYGRYEDMKYALR 168
Query: 77 KLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD ++F+ + SY+RVRE D+ S + S SRSP SR SP YS S S S S S+
Sbjct: 169 KLDDTKFKSHEGETSYIRVRE-DNGESRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSH 226
Query: 136 SP 137
SP
Sbjct: 227 SP 228
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 99/145 (68%), Gaps = 18/145 (12%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
+SR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G GIVDYT+YDDMKYA
Sbjct: 116 ISRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYA 175
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
IRKLD +EFRN ++R+Y+RVR+Y+S RS S S S S S R RS RS S SRS
Sbjct: 176 IRKLDDTEFRNPWARAYIRVRKYESSRSRSHSRSPSRSRSPKRVRSRSLERSVSRSRS-- 233
Query: 135 YSPRSRSYSPRGKYSRRSPSLSPAR 159
RS S+SP +
Sbjct: 234 ----------------RSRSVSPIK 242
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRV+V+GLP+S SWQDLKDHMR AGDVC++ V RD TGIV+Y Y+DMKYA+RKLD
Sbjct: 115 NYRVIVSGLPASGSWQDLKDHMREAGDVCYTDVLRD---GTGIVEYGRYEDMKYALRKLD 171
Query: 80 RSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 137
++F+ + SY+RV+E D+ S + S SRSP SR SP YS S S S S S+SP
Sbjct: 172 DTKFKSHEGETSYIRVKE-DNGESRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|66548276|ref|XP_393525.2| PREDICTED: serine/arginine-rich splicing factor 1-like [Apis
mellifera]
Length = 248
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 84/133 (63%), Gaps = 23/133 (17%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ Y+DMKYA+
Sbjct: 117 ARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRYEDMKYAV 173
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+KLD S FR + +Y+RV+E + S R RS R RS SR S
Sbjct: 174 KKLDDSRFRSHEGEVAYIRVKE--------------DHNSGDRGRSEDRERGRSHSR--S 217
Query: 135 YSPRSR---SYSP 144
YSPR R +YSP
Sbjct: 218 YSPRRRGSPTYSP 230
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 6/102 (5%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
GG+ G SRRSD+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+
Sbjct: 98 GGASGPSRRSDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---GTGVVEFLRYE 154
Query: 70 DMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRS 110
DMKYAIR+LD S+FR + SY+RVRE R SRS SRS
Sbjct: 155 DMKYAIRRLDDSKFRSHEGESSYIRVRE--ERAGGSRSRSRS 194
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 58/62 (93%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYAI
Sbjct: 115 SRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAI 174
Query: 76 RK 77
+K
Sbjct: 175 KK 176
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 56/61 (91%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSRRSD+RV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G GIVDYT+YDDMKY
Sbjct: 103 GVSRRSDFRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAGETIGIVDYTNYDDMKY 162
Query: 74 A 74
A
Sbjct: 163 A 163
>gi|383848005|ref|XP_003699643.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Megachile
rotundata]
Length = 248
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYA+
Sbjct: 117 ARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAV 173
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSP 121
+KLD S FR + +Y+RV+E S RS R S SRS SP
Sbjct: 174 KKLDDSRFRSHEGEVAYIRVKEDHSSGDRGRSEDRERGRSHSRSYSP 220
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 58/62 (93%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYAI
Sbjct: 113 SRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAI 172
Query: 76 RK 77
+K
Sbjct: 173 KK 174
>gi|340726341|ref|XP_003401518.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
terrestris]
gi|350423930|ref|XP_003493634.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Bombus
impatiens]
Length = 248
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 84/133 (63%), Gaps = 23/133 (17%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYA+
Sbjct: 117 ARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAV 173
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+KLD S FR + +Y+RV+E + S R RS R RS SR S
Sbjct: 174 KKLDDSRFRSHEGEVAYIRVKE--------------DHNSGDRGRSEDRERGRSHSR--S 217
Query: 135 YSPRSR---SYSP 144
YSPR R +YSP
Sbjct: 218 YSPRRRGSPTYSP 230
>gi|402581303|gb|EJW75251.1| alternative splicing regulator, partial [Wuchereria bancrofti]
Length = 217
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 102/171 (59%), Gaps = 31/171 (18%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V+GLP + SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+RKLD
Sbjct: 64 YRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRD---GTGVVEYTNYEDMKYALRKLDD 120
Query: 81 SEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP-- 137
++F+ + +Y+RV+E + SP SRSRS +P +RS S YSP
Sbjct: 121 TKFKSHEGEVTYIRVKE---------ANINSPNRSRSRSHTPRKTRS-----SPKYSPTR 166
Query: 138 ---------RSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRSGS 179
R + RR S SP S++ RSPS + ++ SRSGS
Sbjct: 167 SPSKSRSRSSRSRSHSRTSFVRR--STSPVHSSNSRSPSKTRSKTRSRSGS 215
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 57/61 (93%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLPSSASWQDLKDHMR+ G+VCFSQVFRD G TGIVDYTSY+DMKYA+
Sbjct: 115 SRRSEYRVVVSGLPSSASWQDLKDHMRKGGEVCFSQVFRDGRGTTGIVDYTSYEDMKYAV 174
Query: 76 R 76
R
Sbjct: 175 R 175
>gi|380024306|ref|XP_003695942.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Apis florea]
Length = 248
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 83/133 (62%), Gaps = 23/133 (17%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ Y+DMKYA+
Sbjct: 117 ARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRYEDMKYAV 173
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+K D S FR + +Y+RV+E + S R RS R RS SR S
Sbjct: 174 KKXDDSRFRSHEGEVAYIRVKE--------------DHNSGDRGRSEDRERGRSHSR--S 217
Query: 135 YSPRSR---SYSP 144
YSPR R +YSP
Sbjct: 218 YSPRRRGSPTYSP 230
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 11/123 (8%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS+YRVLVTGLP S SWQDLKDHMR AGDVCF+ F+D TG+V++ ++DMKYA+
Sbjct: 112 ARRSEYRVLVTGLPPSGSWQDLKDHMREAGDVCFADTFKD---GTGVVEFLRHEDMKYAV 168
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+KLD S FR + SY+RV+E RSP Y ++ SP Y+R SP S
Sbjct: 169 KKLDDSRFRSHEGEVSYIRVKEDYGSGGGGGLRDRSPEY---QAGSPSYTRRGSP----S 221
Query: 135 YSP 137
YSP
Sbjct: 222 YSP 224
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 54/57 (94%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+YRV+VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD G TGIVDYT+Y+DMKYA++
Sbjct: 111 EYRVVVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAVK 167
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/116 (56%), Positives = 82/116 (70%), Gaps = 6/116 (5%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 82
V+V+GLP+S SWQDLKDHMR AGDVC++ V RD TGIV+Y Y+DMKYA+RKLD ++
Sbjct: 118 VIVSGLPASGSWQDLKDHMREAGDVCYTDVLRD---GTGIVEYGRYEDMKYALRKLDDTK 174
Query: 83 FR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 137
F+ + SY+RV+E D+ S + S SRSP SR SP YS S S S S S+SP
Sbjct: 175 FKSHEGETSYIRVKE-DNGESRAHSRSRSPVGRASRG-SPQYSPSYSNSGSHSHSP 228
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 57/65 (87%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GVSR S++RV+V GLPSSASWQDLKDHMR+AGDVCF++V RD G G+VDYT+YDDMKY
Sbjct: 115 GVSRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDYTNYDDMKY 174
Query: 74 AIRKL 78
A+R L
Sbjct: 175 AVRNL 179
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 6/119 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
++YRV+VTGLP+S SWQDLKDHMR AGDVC++ + RD TG+V+Y DDMKYAIRKL
Sbjct: 120 TNYRVIVTGLPTSGSWQDLKDHMREAGDVCYADITRD---GTGVVEYARLDDMKYAIRKL 176
Query: 79 DRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 136
D ++F+ + +Y+RVRE D RS SRSP +R+ SP YS SRS S S
Sbjct: 177 DDTKFKSHEGETAYIRVRE-DDINGGGRSRSRSP-MARATRGSPQYSPKGGRSRSRSTS 233
>gi|170045710|ref|XP_001850441.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
gi|167868651|gb|EDS32034.1| arginine/serine-rich splicing factor [Culex quinquefasciatus]
Length = 241
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS +RV+VTGLP+S SWQDLKDHMR AGDVCF+ V++D TG+V+Y ++DMKYAI
Sbjct: 117 ARRSQFRVVVTGLPASGSWQDLKDHMREAGDVCFADVYKD---GTGVVEYLRHEDMKYAI 173
Query: 76 RKLDRSEFR-NAFSRSYVRVRE---YDSRRSYSRSPSRSPYYSRSRSRSPYYS 124
+KLD S FR + +Y+RVRE D RR RS Y R R +P YS
Sbjct: 174 KKLDDSRFRSHEGEVAYIRVREDSGNDDRRGGGEHRDRS-YSPRRRRGTPTYS 225
>gi|312074319|ref|XP_003139917.1| arginine/serine-rich splicing factor 1B [Loa loa]
gi|307764919|gb|EFO24153.1| arginine/serine-rich splicing factor 1B [Loa loa]
Length = 266
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 79/111 (71%), Gaps = 13/111 (11%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RRS YRV+++GLP + SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+R
Sbjct: 107 RRSGYRVVISGLPDTGSWQDLKDHMRDAGEICYADVFRD---GTGVVEYTNYEDMKYALR 163
Query: 77 KLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRS 126
KLD ++F+ + +Y+RVRE + SP SRSRS +P +RS
Sbjct: 164 KLDDTKFKSHEGEVTYIRVREAN---------INSPNRSRSRSYTPRKTRS 205
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 64/79 (81%), Gaps = 4/79 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YRV+V+GLPSS SWQDLKDHMR AGD+C++ V+RD TG+V+YT YDDMKYAIRKL
Sbjct: 115 SGYRVIVSGLPSSGSWQDLKDHMRDAGDICYADVYRDG---TGVVEYTKYDDMKYAIRKL 171
Query: 79 DRSEFR-NAFSRSYVRVRE 96
D ++F+ + SY+RVRE
Sbjct: 172 DDTKFKSHEGDTSYIRVRE 190
>gi|307173759|gb|EFN64546.1| Splicing factor, arginine/serine-rich 1 [Camponotus floridanus]
Length = 262
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLP + SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA+
Sbjct: 131 ARRSQYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVYKDG---TGVVEFLRHDDMKYAV 187
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 188 KKLDDSRFRSHEGEVAYIRVRE 209
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLPSS SWQDLKDHMR AGDVCF+ V++D TG+V++ Y+DMKYAI
Sbjct: 112 ARRSQYRVLVSGLPSSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRYEDMKYAI 168
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+R++E
Sbjct: 169 KKLDDSRFRSHEGEVAYIRIKE 190
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 66/84 (78%), Gaps = 4/84 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G SRRSD+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKY
Sbjct: 94 GPSRRSDFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---GTGVVEFLRYEDMKY 150
Query: 74 AIRKLDRSEFR-NAFSRSYVRVRE 96
AIR+LD S+FR + SY+RVRE
Sbjct: 151 AIRRLDDSKFRSHEGESSYIRVRE 174
>gi|156545752|ref|XP_001605411.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Nasonia
vitripennis]
Length = 257
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Query: 10 GGSRG---VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 66
G SRG +RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++
Sbjct: 116 GNSRGRGPPARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFL 172
Query: 67 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVRE 96
Y+DMKYA++KLD S FR + +Y+RV+E
Sbjct: 173 RYEDMKYAVKKLDDSRFRSHEGEVAYIRVKE 203
>gi|157113456|ref|XP_001657837.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108877724|gb|EAT41949.1| AAEL006473-PA [Aedes aegypti]
Length = 237
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 69/88 (78%), Gaps = 5/88 (5%)
Query: 11 GSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
G+RG +RRS +RV+VTGLP+S SWQDLKDHMR AGDVCF+ V++D TG+V++ ++
Sbjct: 107 GNRGPPARRSQFRVMVTGLPASGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHE 163
Query: 70 DMKYAIRKLDRSEFR-NAFSRSYVRVRE 96
DMKYAI+KLD S FR + +Y+RVRE
Sbjct: 164 DMKYAIKKLDDSRFRSHEGEVAYIRVRE 191
>gi|332027470|gb|EGI67553.1| Splicing factor, arginine/serine-rich 1 [Acromyrmex echinatior]
Length = 248
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA+
Sbjct: 117 ARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHDDMKYAV 173
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRS 110
+KLD S FR + +Y+RV+E S RS R
Sbjct: 174 KKLDDSRFRSHEGEVAYIRVKEDHSGGDRGRSEDRE 209
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 13/106 (12%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 116 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRS 120
RKLD ++FR + +Y+RV+ RSP Y RSRSRS
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK---------VDGPRSPSYGRSRSRS 209
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA+
Sbjct: 100 ARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAV 156
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + SY+RVRE
Sbjct: 157 KKLDDSRFRSHEGEVSYIRVRE 178
>gi|346471975|gb|AEO35832.1| hypothetical protein [Amblyomma maculatum]
Length = 223
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA+
Sbjct: 100 ARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAV 156
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + SY+RVRE
Sbjct: 157 KKLDDSRFRSHEGEVSYIRVRE 178
>gi|325303176|tpg|DAA34416.1| TPA_inf: alternative splicing factor ASF/SF2 [Amblyomma variegatum]
Length = 222
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA+
Sbjct: 100 ARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAV 156
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + SY+RVRE
Sbjct: 157 KKLDDSRFRSHEGEVSYIRVRE 178
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRV+VTGLP + SWQDLKDHMR AGDVC++ V++D TG+V++ Y+DMKYA+
Sbjct: 98 ARRSQYRVIVTGLPPTGSWQDLKDHMREAGDVCYADVYKD---GTGVVEFLRYEDMKYAV 154
Query: 76 RKLDRSEFRNAFSR-SYVRVRE 96
+KLD S FR+ S SYVRV+E
Sbjct: 155 KKLDDSRFRSHESEVSYVRVKE 176
>gi|289739445|gb|ADD18470.1| alternative splicing factor ASF/SF2 [Glossina morsitans morsitans]
Length = 236
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRVLVTGLPSS SWQDLKDHMR AGDVCF+ ++D TG+V++ ++DMKYAI
Sbjct: 112 TKRSQYRVLVTGLPSSGSWQDLKDHMREAGDVCFADTYKD---GTGVVEFLRHEDMKYAI 168
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + Y+RVRE
Sbjct: 169 KKLDDSRFRSHEGEVGYIRVRE 190
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 59/76 (77%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+RVLV GLP SASWQDLKDH+R+ ++ VFRDR G+TG+V++ + DDM+ IRKLD
Sbjct: 108 FRVLVKGLPMSASWQDLKDHVRQVCKPAYTNVFRDRDGVTGVVEFETADDMERTIRKLDD 167
Query: 81 SEFRNAFSRSYVRVRE 96
+EFRN F R+YVRV E
Sbjct: 168 TEFRNPFDRAYVRVVE 183
>gi|240848767|ref|NP_001155687.1| serine/arginine-rich splicing factor 1-like [Acyrthosiphon pisum]
gi|239789607|dbj|BAH71418.1| ACYPI006929 [Acyrthosiphon pisum]
Length = 244
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLVTGLP+S SWQDLKDHMR AGDVC++ V++D +G+V++ YDDMKYA+
Sbjct: 116 ARRSQYRVLVTGLPASGSWQDLKDHMREAGDVCYADVYKDG---SGVVEFLRYDDMKYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
RKLD S FR + +Y+RV++
Sbjct: 173 RKLDDSRFRSHEGEVTYIRVKD 194
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 8 SSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY 65
GG G SRR+DYRV+VTGLP S+SWQDLKDHMRRAG+V FSQV RD GM G++DY
Sbjct: 100 GGGGPNPYGPSRRTDYRVIVTGLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDY 159
Query: 66 TSYDDMKYAIRKLDRSEFRNAFS 88
+ +DM+ A+RKLD SEFRN +
Sbjct: 160 ATREDMETALRKLDGSEFRNPYD 182
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 35/111 (31%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G SRR+DYRV+VTGLP S+SWQDLKDHMRRAG+V FSQV RD GM G++DY + +DM+
Sbjct: 108 GPSRRTDYRVIVTGLPISSSWQDLKDHMRRAGEVTFSQVMRDGRGMLGLIDYATREDMET 167
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYS 124
A+RKLD SEFRN PY +
Sbjct: 168 ALRKLDGSEFRN-----------------------------------PYDT 183
>gi|91085405|ref|XP_967263.1| PREDICTED: similar to GA20008-PA [Tribolium castaneum]
gi|270009156|gb|EFA05604.1| hypothetical protein TcasGA2_TC015810 [Tribolium castaneum]
Length = 226
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS +RVLVTGLP S SWQDLKDHMR AGDVCF+ F+D +G+V++ Y+DMKYAI
Sbjct: 106 ARRSQFRVLVTGLPPSGSWQDLKDHMREAGDVCFADAFKDG---SGVVEFLRYEDMKYAI 162
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + SY+RV+E
Sbjct: 163 KKLDDSRFRSHEGEVSYIRVKE 184
>gi|321460885|gb|EFX71923.1| hypothetical protein DAPPUDRAFT_59706 [Daphnia pulex]
Length = 255
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RR++YRV+VTGLP + SWQDLKDHMR AGDVC++ ++D TG+V++ Y+DMKYAI
Sbjct: 120 ARRTNYRVIVTGLPPTGSWQDLKDHMREAGDVCYADTYKD---GTGMVEFLRYEDMKYAI 176
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + SYVRV+E
Sbjct: 177 KKLDDSRFRSHEGEVSYVRVKE 198
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 4/79 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YRVLVTGLP + SWQDLKDHMR AGD+C++ VF+D TG+V+YT DDMKYAI+KL
Sbjct: 114 SGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVFKDG---TGVVEYTRQDDMKYAIKKL 170
Query: 79 DRSEFR-NAFSRSYVRVRE 96
D ++F+ + SY+RV+E
Sbjct: 171 DDTKFKSHEGETSYIRVKE 189
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRVLV+GLP + SWQDLKDHMR AGDVCF+ VFRD TG+V++ YDDMKYA+
Sbjct: 106 SRRSEYRVLVSGLPPTGSWQDLKDHMREAGDVCFADVFRDG---TGVVEFLRYDDMKYAV 162
Query: 76 RKLDRSEFR 84
+ LD S+FR
Sbjct: 163 KHLDDSKFR 171
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%), Gaps = 4/79 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YRVLVTGLP + SWQDLKDHMR AGD+C++ VF+D TG+V+YT DDMKYAI+KL
Sbjct: 154 SGYRVLVTGLPVTGSWQDLKDHMREAGDICYADVFKDG---TGVVEYTRQDDMKYAIKKL 210
Query: 79 DRSEFR-NAFSRSYVRVRE 96
D ++F+ + SY+RV+E
Sbjct: 211 DDTKFKSHEGETSYIRVKE 229
>gi|241849002|ref|XP_002415663.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215509877|gb|EEC19330.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 223
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 4/79 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YRVLV+GLP S SWQDLKDHMR AGDVC++ VF+D TG+V++ Y+DMKYA++KL
Sbjct: 103 SQYRVLVSGLPPSGSWQDLKDHMREAGDVCYADVFKD---GTGVVEFLRYEDMKYAVKKL 159
Query: 79 DRSEFR-NAFSRSYVRVRE 96
D S FR + SY+RVRE
Sbjct: 160 DDSRFRSHEGEVSYIRVRE 178
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 59/69 (85%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRVLV+GLP + SWQDLKDHMR AGDVC++ VFRD TG+V++ +Y+DMKYA+
Sbjct: 98 SRRSEYRVLVSGLPPTGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFLNYEDMKYAV 154
Query: 76 RKLDRSEFR 84
++LD S+FR
Sbjct: 155 KQLDDSKFR 163
>gi|170591727|ref|XP_001900621.1| SF2 [Brugia malayi]
gi|158591773|gb|EDP30376.1| SF2, putative [Brugia malayi]
Length = 298
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 11/149 (7%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V+GLP + SWQDLKDHMR AG++C++ VFRD TG+V+YT+Y+DMKYA+RKLD
Sbjct: 111 YRVIVSGLPDTGSWQDLKDHMRDAGEICYADVFRDG---TGVVEYTNYEDMKYALRKLDD 167
Query: 81 SEFR-NAFSRSYVRVREYDSRR-SYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 138
++F+ + +Y+RV+E + + SRS S +P +RS SP YS +RS +
Sbjct: 168 TKFKSHEGEVTYIRVKEANINSPNRSRSRSHTPRKTRS---SPKYSPTRS-ASRSRSRSS 223
Query: 139 SRSYSPRGKYSRRSPSLSPARSASQRSPS 167
R + RRS SP S++ RSPS
Sbjct: 224 RSRSHTRTSFVRRST--SPVHSSNSRSPS 250
>gi|307203784|gb|EFN82720.1| Splicing factor, arginine/serine-rich 1 [Harpegnathos saltator]
Length = 193
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 56/69 (81%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLVTGLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA+
Sbjct: 117 ARRSQYRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHDDMKYAV 173
Query: 76 RKLDRSEFR 84
+KLD S FR
Sbjct: 174 KKLDDSRFR 182
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 6 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDY 65
+ GGS RRSD+RV V+GLP + SWQDLKDHMR AGDV F+ VF+D TG+V++
Sbjct: 81 EFPRGGSGPPPRRSDFRVQVSGLPPTGSWQDLKDHMREAGDVLFTDVFKDG---TGVVEF 137
Query: 66 TSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 95
YDDMK+AIR LD S+FR + SY+RV+
Sbjct: 138 ARYDDMKFAIRNLDDSKFRSHEGETSYIRVK 168
>gi|195038647|ref|XP_001990768.1| GH18077 [Drosophila grimshawi]
gi|193894964|gb|EDV93830.1| GH18077 [Drosophila grimshawi]
Length = 252
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 110 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAI 166
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 167 KKLDDSRFRSHEGEVAYIRVRE 188
>gi|195388956|ref|XP_002053144.1| GJ23504 [Drosophila virilis]
gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila virilis]
Length = 247
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 110 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKDG---SGVVEFLRHEDMKYAI 166
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 167 KKLDDSRFRSHEGEVAYIRVRE 188
>gi|449480417|ref|XP_002196866.2| PREDICTED: serine/arginine-rich splicing factor 1 [Taeniopygia
guttata]
Length = 210
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 73 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAV 129
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 130 RKLDNTKFRSHEGETAYIRVK 150
>gi|195451089|ref|XP_002072763.1| GK13511 [Drosophila willistoni]
gi|194168848|gb|EDW83749.1| GK13511 [Drosophila willistoni]
Length = 263
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP+S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 113 AKRSQYRVMVTGLPTSGSWQDLKDHMREAGDVCFADTYKDG---SGVVEFLRHEDMKYAI 169
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 170 KKLDDSRFRSHEGEVAYIRVRE 191
>gi|195110201|ref|XP_001999670.1| GI24651 [Drosophila mojavensis]
gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mojavensis]
Length = 246
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 110 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAI 166
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 167 KKLDDSRFRSHEGEVAYIRVRE 188
>gi|194744791|ref|XP_001954876.1| GF16525 [Drosophila ananassae]
gi|190627913|gb|EDV43437.1| GF16525 [Drosophila ananassae]
Length = 253
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 108 AKRSQYRVMVTGLPGSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAI 164
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 165 KKLDDSRFRSHEGEVAYIRVRE 186
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 6/83 (7%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
++YRV+VTGLP+S SWQDLKDHMR AGDVC++ + RD TG+V+Y DDMKYAIRKL
Sbjct: 120 TNYRVIVTGLPTSGSWQDLKDHMREAGDVCYADITRDG---TGVVEYARLDDMKYAIRKL 176
Query: 79 DRSEFR-NAF--SRSYVRVREYD 98
D ++F+ + F +Y+RVRE D
Sbjct: 177 DDTKFKSHEFQGETAYIRVREDD 199
>gi|21358097|ref|NP_652611.1| SF2, isoform A [Drosophila melanogaster]
gi|386765902|ref|NP_001247139.1| SF2, isoform B [Drosophila melanogaster]
gi|194901262|ref|XP_001980171.1| GG20059 [Drosophila erecta]
gi|195349404|ref|XP_002041235.1| GM15444 [Drosophila sechellia]
gi|7243684|gb|AAF43413.1|AF232773_1 SR family splicing factor SF2 [Drosophila melanogaster]
gi|7331146|gb|AAF60294.1|AF234157_1 SR family splicing factor [Drosophila melanogaster]
gi|7300132|gb|AAF55300.1| SF2, isoform A [Drosophila melanogaster]
gi|15292149|gb|AAK93343.1| LD40489p [Drosophila melanogaster]
gi|190651874|gb|EDV49129.1| GG20059 [Drosophila erecta]
gi|194122840|gb|EDW44883.1| GM15444 [Drosophila sechellia]
gi|220946268|gb|ACL85677.1| SF2-PA [synthetic construct]
gi|220955952|gb|ACL90519.1| SF2-PA [synthetic construct]
gi|383292748|gb|AFH06457.1| SF2, isoform B [Drosophila melanogaster]
Length = 255
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP+S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 110 AKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDG---SGVVEFLRHEDMKYAI 166
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 167 KKLDDSRFRSHEGEVAYIRVRE 188
>gi|195501014|ref|XP_002097620.1| GE26323 [Drosophila yakuba]
gi|194183721|gb|EDW97332.1| GE26323 [Drosophila yakuba]
Length = 254
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP+S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 110 AKRSQYRVMVTGLPASGSWQDLKDHMREAGDVCFADTYKDG---SGVVEFLRHEDMKYAI 166
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 167 KKLDDSRFRSHEGEVAYIRVRE 188
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 116 SRRSEYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +YVRV+
Sbjct: 173 RKLDNTKFRSHEGETAYVRVK 193
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
++RS YRV+VTGLP S SWQDLKDHMR AGDVCF+ ++D +G+V++ ++DMKYAI
Sbjct: 110 AKRSQYRVMVTGLPPSGSWQDLKDHMREAGDVCFADTYKD---GSGVVEFLRHEDMKYAI 166
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+KLD S FR + +Y+RVRE
Sbjct: 167 KKLDDSRFRSHEGEVAYIRVRE 188
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 116 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 125 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 181
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 182 RKLDNTKFRSHEGETAYIRVK 202
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 162 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 218
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 219 RKLDNTKFRSHEGETAYIRVK 239
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 115 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 171
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 172 RKLDNTKFRSHEGETAYIRVK 192
>gi|322789865|gb|EFZ15012.1| hypothetical protein SINV_14247 [Solenopsis invicta]
Length = 186
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 56/69 (81%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS YRVLV+GLP S SWQDLKDHMR AGDVCF+ V++D TG+V++ +DDMKYA+
Sbjct: 118 ARRSQYRVLVSGLPPSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHDDMKYAV 174
Query: 76 RKLDRSEFR 84
+KLD S FR
Sbjct: 175 KKLDDSRFR 183
>gi|410915734|ref|XP_003971342.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
Length = 238
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRSDYRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 110 SRRSDYRVVVSGLPQSGSWQDLKDHMREAGDVCYTDVYRDG---TGVVEFVRKEDMTYAV 166
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 167 RKLDNTKFRSHEGETAYIRVK 187
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 135 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRD---GTGVVEFVRKEDMTYAV 191
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 192 RKLDNTKFRSHEGETAYIRVK 212
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 126 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 182
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 183 RKLDNTKFRSHEGETAYIRVK 203
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 164 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 220
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 221 RKLDNTKFRSHEGETAYIRVK 241
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 151 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 207
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 208 RKLDNTKFRSHEGETAYIRVK 228
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YAI
Sbjct: 115 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAI 171
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 172 RKLDNTKFRSHEGETAYIRVK 192
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
D+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYA+RKLD
Sbjct: 112 DFRVVVTGLPPTGSWQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAVRKLD 168
Query: 80 RSEFR-NAFSRSYVRVRE 96
S+FR + SY+RVRE
Sbjct: 169 DSKFRSHEGESSYIRVRE 186
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 61/78 (78%), Gaps = 4/78 (5%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
D+RV+VTGLP + SWQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD
Sbjct: 118 DFRVIVTGLPPTGSWQDLKDHMREAGDVGYADVFRD---GTGVVEFLRYEDMKYAIRRLD 174
Query: 80 RSEFR-NAFSRSYVRVRE 96
S+FR + SY+RVRE
Sbjct: 175 DSKFRSHEGESSYIRVRE 192
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS+YR LV+GLP + SWQDLKDHMR AGDVCF+ V+RD TG+V++ Y+DMKYA
Sbjct: 112 ARRSEYRCLVSGLPPTGSWQDLKDHMREAGDVCFADVYRDG---TGVVEFLRYEDMKYAA 168
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
+ LD ++FR + SY+RV+E
Sbjct: 169 KHLDDTKFRSHEGETSYIRVKE 190
>gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio rerio]
gi|182889684|gb|AAI65510.1| Sfrs1 protein [Danio rerio]
Length = 258
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 115 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 171
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 172 RKLDNTKFRSHEGETAYIRVK 192
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T YDD+KYA+RKLD
Sbjct: 126 YRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD---GTGVVEFTRYDDVKYAVRKLDD 182
Query: 81 SEFR-NAFSRSYVRVRE 96
++FR + +Y+RVRE
Sbjct: 183 TKFRSHEGETAYIRVRE 199
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 86/146 (58%), Gaps = 13/146 (8%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS +RV+VTGLPSS SWQDLKDHMR AGDVCF+ V++D TG+V++ ++DMKYAI
Sbjct: 112 ARRSQFRVMVTGLPSSGSWQDLKDHMREAGDVCFADVYKD---GTGVVEFLRHEDMKYAI 168
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR--SRSPYYSRSRSPSRSW 133
+KLD S FR+ R R S R+ +Y S+
Sbjct: 169 KKLDDSRFRSHEVSKKTRGEREREREKERGRERESSTCERANFIPIPIFYILSQ------ 222
Query: 134 SYSPRSRSYSPRGKYSRRSPSLSPAR 159
+ SPR++SYSPR + R SP+ SP +
Sbjct: 223 TMSPRAKSYSPRRR--RGSPTYSPVQ 246
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 81/109 (74%), Gaps = 8/109 (7%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YRV+++GLP+S SWQDLKDHMR AGD+C++ V++D TG+V+YT YDDMKYA+RKL
Sbjct: 113 SGYRVIISGLPASGSWQDLKDHMRDAGDICYADVYKDG---TGVVEYTKYDDMKYAVRKL 169
Query: 79 DRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRS 126
D ++F+ + SY+RVRE S RS SR+ SRSP+ R SP YS +
Sbjct: 170 DDTKFKSHEGDTSYIRVREA-SARSRSRTRSRSPHTKRD---SPQYSPA 214
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
R D RV V LPS+ +DL+D + G +CF V RG +++ D + AIR
Sbjct: 4 RRDCRVYVGNLPSNVKQRDLEDLFDKYGRICFIDVKYSRGAPFAFLEFEDSRDAEDAIR 62
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T YDD+KYA+RKLD
Sbjct: 128 YRVIVEGLPPTGSWQDLKDHMREAGDVCYADVARD---GTGVVEFTRYDDVKYAVRKLDD 184
Query: 81 SEFR-NAFSRSYVRVRE 96
++FR + +Y+RVRE
Sbjct: 185 TKFRSHEGETAYIRVRE 201
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 86/162 (53%), Gaps = 20/162 (12%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS++RV+VTGLP S SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+
Sbjct: 107 TRRSEFRVIVTGLPPSGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFVRREDMEYAL 163
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
R+LDR+EFR + + +RV R S PY SR P R S
Sbjct: 164 RRLDRTEFRSHQGEMANIRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQS 223
Query: 135 YSPRSRSYSPRGKYSRRSPSLSPAR--SASQRSPSGSPPRSF 174
PR SR SP PAR + SP PPR +
Sbjct: 224 --------PPRRHVSRHSP---PARRHPVTHHSP---PPRHY 251
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 70/93 (75%), Gaps = 5/93 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RV+V+GLP + SWQDLKDHMR AG+V F+ V+RD TG+V++ Y D+KYA+
Sbjct: 106 ARRSDHRVIVSGLPQTGSWQDLKDHMREAGEVYFADVYRD---GTGVVEFAHYSDVKYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSP 107
+ LD S+FR + SYVRV+E D RS SRSP
Sbjct: 163 KHLDDSKFRSHEGETSYVRVKE-DRGRSRSRSP 194
>gi|354497469|ref|XP_003510842.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Cricetulus griseus]
Length = 201
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 86 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 142
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 143 RKLDDTKFRSHEGETSYIRV 162
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRVLV+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 112 SRRSEYRVLVSGLPQSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 168
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y++V+
Sbjct: 169 RKLDNTKFRSHEGETAYIQVK 189
>gi|338727750|ref|XP_001488704.3| PREDICTED: serine/arginine-rich splicing factor 9 [Equus caballus]
Length = 289
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 174 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 230
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 231 RKLDDTKFRSHEGETSYIRV 250
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 112 SRRSEYRVVVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAV 168
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 169 RKLDNTKFRSHEGETAYIRVK 189
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 111 SRRSEYRVVVSGLPQSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAV 167
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 168 RKLDNTKFRSHEGETAYIRVK 188
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 54/62 (87%)
Query: 37 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 96
+DHMR+AGDVCF++V RD G GIVDYT+YDDMKYAIRKLD +EFRN ++R+Y+RV++
Sbjct: 122 FQDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKK 181
Query: 97 YD 98
YD
Sbjct: 182 YD 183
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 117 SRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 173
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 174 RKLDNTKFRSHEGETAYIRVK 194
>gi|410976794|ref|XP_003994798.1| PREDICTED: serine/arginine-rich splicing factor 9 [Felis catus]
Length = 340
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 5/87 (5%)
Query: 10 GGSRGV-SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 68
GG G +RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y
Sbjct: 218 GGRNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRK 274
Query: 69 DDMKYAIRKLDRSEFR-NAFSRSYVRV 94
+DM+YA+RKLD ++FR + SY+RV
Sbjct: 275 EDMEYALRKLDDTKFRSHEGETSYIRV 301
>gi|440909520|gb|ELR59420.1| Serine/arginine-rich splicing factor 9, partial [Bos grunniens
mutus]
Length = 159
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 44 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 100
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 101 RKLDETKFRSHEGETSYIRV 120
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T Y+D+KYA+RKLD
Sbjct: 123 YRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---GTGVVEFTRYEDVKYAVRKLDD 179
Query: 81 SEFR-NAFSRSYVRVRE 96
++FR + +Y+RVRE
Sbjct: 180 TKFRSHEGETAYIRVRE 196
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 56/69 (81%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 115 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 171
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 172 RKLDNTKFR 180
>gi|171849000|pdb|3BEG|B Chain B, Crystal Structure Of Sr Protein Kinase 1 Complexed To
Its Substrate AsfSF2
Length = 115
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 12 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAV 68
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 69 RKLDNTKFRSHEGETAYIRVK 89
>gi|159163317|pdb|1WG4|A Chain A, Solution Structure Of Rrm Domain In Protein Bab31986
Length = 98
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 67
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 68 RKLDDTKFRSHEGETSYIRV 87
>gi|432092851|gb|ELK25217.1| Serine/arginine-rich splicing factor 9 [Myotis davidii]
Length = 199
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 84 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 140
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 141 RKLDDTKFRSHEGETSYIRV 160
>gi|148228289|ref|NP_001088400.1| serine/arginine-rich splicing factor 9 [Xenopus laevis]
gi|54261635|gb|AAH84289.1| LOC495254 protein [Xenopus laevis]
Length = 230
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V +D GM GIV++ +DM+YA+
Sbjct: 117 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKD--GM-GIVEFIRKEDMEYAL 173
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 174 RKLDDTKFRSHEGETSYIRV 193
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR+D+RV+V+GLP + SWQDLKDHMR AGDVC++ V+RD TG+V++ + DDM++A+
Sbjct: 105 SRRTDFRVMVSGLPPTGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVNRDDMQFAV 161
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
+ LD ++FR + +Y+RV+
Sbjct: 162 KHLDDTKFRSHEGETAYIRVK 182
>gi|296490264|tpg|DAA32377.1| TPA: splicing factor, arginine/serine-rich 9-like [Bos taurus]
Length = 221
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDETKFRSHEGETSYIRV 182
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 4/77 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V GLP + SWQDLKDHMR AGDVC++ V RD TG+V++T Y+D+KYA+RKLD
Sbjct: 123 YRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVARD---GTGVVEFTRYEDVKYAVRKLDD 179
Query: 81 SEFR-NAFSRSYVRVRE 96
++FR + +Y+RVRE
Sbjct: 180 TKFRSHEGETAYIRVRE 196
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|426247382|ref|XP_004017465.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Ovis
aries]
Length = 226
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDETKFRSHEGETSYIRV 182
>gi|134085783|ref|NP_001076867.1| serine/arginine-rich splicing factor 9 [Bos taurus]
gi|358421698|ref|XP_003585083.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Bos taurus]
gi|133777441|gb|AAI14700.1| SFRS9 protein [Bos taurus]
gi|296478484|tpg|DAA20599.1| TPA: splicing factor, arginine/serine-rich 9 [Bos taurus]
Length = 221
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDETKFRSHEGETSYIRV 182
>gi|444723179|gb|ELW63840.1| Serine/arginine-rich splicing factor 9 [Tupaia chinensis]
Length = 235
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 120 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 176
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 177 RKLDDTKFRSHEGETSYIRV 196
>gi|47086241|ref|NP_998064.1| splicing factor, arginine/serine-rich 9 [Danio rerio]
gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio]
Length = 244
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS++RV+VTGLP + SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+
Sbjct: 103 TRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYAL 159
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
R+LD +EFR + +Y+RV E
Sbjct: 160 RRLDSTEFRSHQGETAYIRVME 181
>gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Danio rerio]
Length = 246
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS++RV+VTGLP + SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+
Sbjct: 105 TRRSEFRVIVTGLPPTGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYAL 161
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
R+LD +EFR + +Y+RV E
Sbjct: 162 RRLDSTEFRSHQGETAYIRVME 183
>gi|397525476|ref|XP_003832692.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan paniscus]
Length = 274
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 159 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 215
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 216 RKLDDTKFRSHEGETSYIRV 235
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ VFRD TG+V++ +DM YA+
Sbjct: 124 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDG---TGVVEFVRKEDMTYAV 180
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 181 RKLDNTKFRSHEGETAYIRVK 201
>gi|301790878|ref|XP_002930446.1| PREDICTED: splicing factor, arginine/serine-rich 9-like [Ailuropoda
melanoleuca]
Length = 253
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 138 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 194
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 195 RKLDDTKFRSHEGETSYIRV 214
>gi|90076960|dbj|BAE88160.1| unnamed protein product [Macaca fascicularis]
Length = 182
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 45 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 101
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 102 RKLDNTKFRSHEGETAYIRVK 122
>gi|158429186|pdb|2O3D|A Chain A, Structure Of Human Sf2ASF RNA RECOGNITION MOTIF 2 (RRM2)
Length = 113
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 11 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 67
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 68 RKLDNTKFRSHEGETAYIRVK 88
>gi|344295340|ref|XP_003419370.1| PREDICTED: serine/arginine-rich splicing factor 9-like, partial
[Loxodonta africana]
Length = 174
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 59 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 115
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 116 RKLDDTKFRSHEGETSYIRV 135
>gi|281340832|gb|EFB16416.1| hypothetical protein PANDA_020890 [Ailuropoda melanoleuca]
Length = 215
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 100 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 156
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 157 RKLDDTKFRSHEGETSYIRV 176
>gi|355718943|gb|AES06437.1| splicing factor, arginine/serine-rich 9 [Mustela putorius furo]
Length = 220
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|395833916|ref|XP_003789963.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1
[Otolemur garnettii]
gi|395833918|ref|XP_003789964.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2
[Otolemur garnettii]
Length = 221
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|13385016|ref|NP_079849.1| serine/arginine-rich splicing factor 9 [Mus musculus]
gi|66774167|sp|Q9D0B0.1|SRSF9_MOUSE RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|12847866|dbj|BAB27740.1| unnamed protein product [Mus musculus]
gi|15126569|gb|AAH12217.1| Splicing factor, arginine/serine rich 9 [Mus musculus]
gi|148687919|gb|EDL19866.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Mus
musculus]
Length = 222
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 107 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 163
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 164 RKLDDTKFRSHEGETSYIRV 183
>gi|57105666|ref|XP_534706.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 1 [Canis
lupus familiaris]
Length = 221
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|149053808|gb|EDM05625.1| rCG34610, isoform CRA_d [Rattus norvegicus]
Length = 181
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 49 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 105
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 106 RKLDNTKFRSHEGETAYIRVK 126
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 107 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 163
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 164 RKLDDTKFRSHEGETSYIRV 183
>gi|12860555|dbj|BAB31986.1| unnamed protein product [Mus musculus]
Length = 190
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 75 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 131
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 132 RKLDDTKFRSHEGETSYIRV 151
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 243 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 299
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 300 RKLDNTKFRSHEGETAYIRVK 320
>gi|57164147|ref|NP_001009255.1| serine/arginine-rich splicing factor 9 [Rattus norvegicus]
gi|92058728|sp|Q5PPI1.1|SRSF9_RAT RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|56388745|gb|AAH87684.1| Splicing factor, arginine/serine rich 9 [Rattus norvegicus]
gi|149063569|gb|EDM13892.1| splicing factor, arginine/serine rich 9, isoform CRA_b [Rattus
norvegicus]
Length = 221
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|324516767|gb|ADY46629.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 210
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 56/66 (84%), Gaps = 3/66 (4%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YRV+++GLP+S SWQDLKDHMR AGD+C+++V +D TG+V+Y +YDDMKYA+RKL
Sbjct: 78 SGYRVVISGLPASGSWQDLKDHMREAGDICYAEVSKDG---TGVVEYINYDDMKYAVRKL 134
Query: 79 DRSEFR 84
D ++F+
Sbjct: 135 DDTKFK 140
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S+YR LV+GLP + SWQDLKDHMR AGDVCF+ V+RD TG+V++ Y+DMKYA + L
Sbjct: 129 SEYRCLVSGLPPTGSWQDLKDHMREAGDVCFADVYRDG---TGVVEFLRYEDMKYAAKHL 185
Query: 79 DRSEFR-NAFSRSYVRVRE 96
D ++FR + SY+RV+E
Sbjct: 186 DDTKFRSHEGETSYIRVKE 204
>gi|119614893|gb|EAW94487.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_b [Homo sapiens]
Length = 230
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 98 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 154
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 155 RKLDNTKFRSHEGETAYIRVK 175
>gi|348585449|ref|XP_003478484.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Cavia
porcellus]
gi|351702214|gb|EHB05133.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|417397369|gb|JAA45718.1| Putative splicing factor arginine/serine-rich 9-like protein
[Desmodus rotundus]
gi|431914272|gb|ELK15530.1| Splicing factor, arginine/serine-rich 9 [Pteropus alecto]
Length = 221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|307078155|ref|NP_001182495.1| splicing factor, arginine/serine-rich 9 [Sus scrofa]
Length = 221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|198436398|ref|XP_002124933.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1,
partial [Ciona intestinalis]
Length = 166
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
S+R++YRV+V GLP S SWQDLKDHMR AGDVC++ V+RD +G+V++ + +DMK+A+
Sbjct: 46 SKRTEYRVIVEGLPGSGSWQDLKDHMREAGDVCYADVYRD---GSGVVEFVNKEDMKFAL 102
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
+ +D ++FR + SY+RV+
Sbjct: 103 KHMDDTKFRSHEGETSYIRVK 123
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR V LP SASWQDLKDH R+ + VFRDRGG+ G+V++ + +D+ AIRKLD
Sbjct: 131 YRATVKNLPMSASWQDLKDHFRKVCTPNYVNVFRDRGGVLGVVEFDTPEDLARAIRKLDD 190
Query: 81 SEFRNAFSRSYVR-VREYDSRRSYSR 105
+EFRN F R+Y+R V + D +R++ +
Sbjct: 191 TEFRNPFERAYIRVVDDSDDKRNHGK 216
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 146 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 202
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 203 RKLDNTKFRSHEGETAYIRVK 223
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 75/116 (64%), Gaps = 10/116 (8%)
Query: 9 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 68
SG G RRSDYR++V GLP S SWQD+KDH+R AGD+C++ V R GIV++T
Sbjct: 147 SGRQGGPLRRSDYRLIVEGLPPSGSWQDVKDHLREAGDICYANVENGR----GIVEFTRA 202
Query: 69 DDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY 123
+DM AIRK D ++ + + +Y+RV+E D+R S SRSP SR RSRS Y
Sbjct: 203 EDMHKAIRKFDDTKLKSHKGETAYIRVKE-DTRSSRSRSPK----TSRRRSRSNTY 253
>gi|355786589|gb|EHH66772.1| hypothetical protein EGM_03825, partial [Macaca fascicularis]
Length = 159
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 44 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 100
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 101 RKLDDTKFRSHEGETSYIRV 120
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 180 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 236
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 237 RKLDNTKFRSHEGETAYIRVK 257
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD---GTGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|297263673|ref|XP_001089031.2| PREDICTED: splicing factor, arginine/serine-rich 9-like [Macaca
mulatta]
Length = 162
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 47 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 103
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 104 RKLDDTKFRSHEGETSYIRV 123
>gi|242011682|ref|XP_002426576.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
gi|212510716|gb|EEB13838.1| Splicing factor, arginine/serine-rich, putative [Pediculus humanus
corporis]
Length = 176
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 76/129 (58%), Gaps = 10/129 (7%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS +RVLVTGLP S SWQDLKDHMR AGDVCF+ VF+D TG+V++ +DMKYA+
Sbjct: 49 ARRSQFRVLVTGLPPSGSWQDLKDHMREAGDVCFADVFKD---GTGVVEFLRLEDMKYAV 105
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+KLD S FR + SYVRV+E S SR R SPS +S
Sbjct: 106 KKLDDSRFRSHEGEVSYVRVKE--DGGSSSRGSLDRGRSRSRSRSYSPRPRRGSPS--YS 161
Query: 135 YSPRSRSYS 143
P R +S
Sbjct: 162 --PVKRDFS 168
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 82
V VT LPS SWQDLKD MR+AG+V F+++ D+ G GIVD+ +DDMKYAI++LD ++
Sbjct: 98 VKVTNLPSRVSWQDLKDFMRKAGEVTFAKI--DKHG-DGIVDFKHHDDMKYAIKRLDDTK 154
Query: 83 FRNAFSRSYVRVREY 97
FRN F R+YVRV++
Sbjct: 155 FRNRFDRAYVRVKQL 169
>gi|296213104|ref|XP_002753142.1| PREDICTED: serine/arginine-rich splicing factor 9, partial
[Callithrix jacchus]
Length = 167
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 52 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 108
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 109 RKLDDTKFRSHEGETSYIRV 128
>gi|355564745|gb|EHH21245.1| hypothetical protein EGK_04262, partial [Macaca mulatta]
Length = 159
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 44 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 100
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 101 RKLDDTKFRSHEGETSYIRV 120
>gi|384950066|gb|AFI38638.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 221
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|4506903|ref|NP_003760.1| serine/arginine-rich splicing factor 9 [Homo sapiens]
gi|114647286|ref|XP_001160785.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Pan
troglodytes]
gi|297693182|ref|XP_002823915.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pongo abelii]
gi|332262536|ref|XP_003280317.1| PREDICTED: serine/arginine-rich splicing factor 9 [Nomascus
leucogenys]
gi|402887863|ref|XP_003907300.1| PREDICTED: serine/arginine-rich splicing factor 9 [Papio anubis]
gi|410047369|ref|XP_003952371.1| PREDICTED: serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|3929377|sp|Q13242.1|SRSF9_HUMAN RecName: Full=Serine/arginine-rich splicing factor 9; AltName:
Full=Pre-mRNA-splicing factor SRp30C; AltName:
Full=Splicing factor, arginine/serine-rich 9
gi|1049078|gb|AAA93069.1| SRp30c [Homo sapiens]
gi|4099429|gb|AAD00626.1| splicing factor SRp30c [Homo sapiens]
gi|62739648|gb|AAH93973.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|62740064|gb|AAH93971.1| Splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|119618600|gb|EAW98194.1| splicing factor, arginine/serine-rich 9 [Homo sapiens]
gi|261861074|dbj|BAI47059.1| splicing factor, arginine/serine-rich 9 [synthetic construct]
gi|380817540|gb|AFE80644.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|383422449|gb|AFH34438.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
gi|410227624|gb|JAA11031.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227626|gb|JAA11032.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410227628|gb|JAA11033.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263740|gb|JAA19836.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263742|gb|JAA19837.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410263744|gb|JAA19838.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305344|gb|JAA31272.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305346|gb|JAA31273.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410305348|gb|JAA31274.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340983|gb|JAA39438.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
gi|410340985|gb|JAA39439.1| serine/arginine-rich splicing factor 9 [Pan troglodytes]
Length = 221
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|395513899|ref|XP_003761159.1| PREDICTED: serine/arginine-rich splicing factor 9 [Sarcophilus
harrisii]
Length = 274
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRVLV+GLP S SWQDLKDHMR AG VC++ V +D GM G+V++ +DM+YA+
Sbjct: 159 SRRSEYRVLVSGLPPSGSWQDLKDHMREAGGVCYADVQKD--GM-GVVEFLRKEDMEYAL 215
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
R+LD S+FR + SY+RV
Sbjct: 216 RRLDDSKFRSHEGETSYIRV 235
>gi|348532825|ref|XP_003453906.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oreochromis
niloticus]
Length = 241
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRS++RV+V+GLP S SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+
Sbjct: 99 TRRSEFRVIVSGLPPSGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYAL 155
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
R+LD +EFR + +Y+RV E
Sbjct: 156 RRLDGTEFRSHQGETAYIRVYE 177
>gi|327282648|ref|XP_003226054.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Anolis
carolinensis]
Length = 245
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V++ +DM+YA+
Sbjct: 130 SRRSEFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GVVEFLRKEDMEYAL 186
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 187 RKLDDTKFRSHEGETSYIRV 206
>gi|426247384|ref|XP_004017466.1| PREDICTED: serine/arginine-rich splicing factor 9 isoform 2 [Ovis
aries]
Length = 200
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 163 RKLDETKFR 171
>gi|403281819|ref|XP_003932372.1| PREDICTED: serine/arginine-rich splicing factor 9 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 58 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 114
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSY 103
RKLD ++FR+ S ++DS Y
Sbjct: 115 RKLDDTKFRSHEESSCCFGSQFDSSGDY 142
>gi|49037494|gb|AAT49042.1| splice factor [Toxoplasma gondii]
Length = 345
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
Query: 9 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 68
+G + G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ + GG+ G+V+Y++
Sbjct: 119 NGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI---EGGV-GVVEYSNG 174
Query: 69 DDMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRS 106
DDM YA+RKL S FRN F + +RV E D+ R R
Sbjct: 175 DDMDYALRKLHGSVFRNIFHTAKIRV-ERDTERGKPRE 211
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR + RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG++++ +DM YA+
Sbjct: 168 SRRCENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVMEFVRKEDMTYAV 224
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 225 RKLDNTKFRSHEGETAYIRVK 245
>gi|52345494|ref|NP_001004795.1| serine/arginine-rich splicing factor 9 [Xenopus (Silurana)
tropicalis]
gi|49257722|gb|AAH74531.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
gi|89272901|emb|CAJ83204.1| splicing factor, arginine/serine-rich 9 [Xenopus (Silurana)
tropicalis]
Length = 225
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 79/123 (64%), Gaps = 14/123 (11%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+YRV+V+GLP S SWQDLKDHMR AGDVC++ V +D GM GIV++ +DM+YA+
Sbjct: 112 SRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVHKD--GM-GIVEFIRKEDMEYAL 168
Query: 76 RKLDRSEFR-NAFSRSYVRV----REYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPS 130
RKLD ++FR + SY+RV SR SPY SR RSP Y+ SP
Sbjct: 169 RKLDDTKFRSHEGETSYIRVCPERNTSYSRSRSRSRGRDSPYQSR---RSPRYA---SPF 222
Query: 131 RSW 133
R +
Sbjct: 223 RPY 225
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGAVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR-NAFSRSYVRVR 95
RKLD ++FR + +Y+RV+
Sbjct: 173 RKLDNTKFRSHEGETAYIRVK 193
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 148 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 204
Query: 76 RKLDRSEFRNAFSRSYVRVREYDS 99
RKLD ++FR + Y R+ +D
Sbjct: 205 RKLDNTKFR-SHEVGYTRILFFDQ 227
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 15/183 (8%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
G + G +RS+YR++V GLP S SWQD+KDH+++AG++C++ V G+V++ Y+
Sbjct: 99 GRNGGPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVH----NGEGVVEFERYE 154
Query: 70 DMKYAIRKLDRSEFR-NAFSRSYVRVRE-------YDSRRSYSRSPSRSPYYSRSRSRSP 121
D++YAIRK D ++FR + +Y+R++E + RR+ S S S+SP R S
Sbjct: 155 DLEYAIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPIRGRCSRSSS 214
Query: 122 YYSRSRSPSRSWSYSPRSRSYSPRGKYSR-RSPSLSPARSASQ-RSPSGSPPRSFSRSGS 179
S R+ S S +SRS SP + R RS S SPAR S+ RSP R+ S SG+
Sbjct: 215 RSKSSIRGRRNGSAS-KSRSRSPVSRQHRDRSESGSPARRVSRSRSPISRQRRARSESGT 273
Query: 180 FAR 182
AR
Sbjct: 274 PAR 276
>gi|158254720|dbj|BAF83333.1| unnamed protein product [Homo sapiens]
Length = 221
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGD C++ V +D GM V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDACYADVQKDGVGM---VEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 163 RKLDDTKFRSHEGETSYIRV 182
>gi|237841065|ref|XP_002369830.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211967494|gb|EEB02690.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 512
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 4/86 (4%)
Query: 9 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 68
+G + G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ + G G+V+Y++
Sbjct: 119 NGPAYGPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNG 174
Query: 69 DDMKYAIRKLDRSEFRNAFSRSYVRV 94
DDM YA+RKL S FRN F + +RV
Sbjct: 175 DDMDYALRKLHGSVFRNIFHTAKIRV 200
>gi|221504321|gb|EEE29996.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 513
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DDM Y
Sbjct: 124 GPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDY 179
Query: 74 AIRKLDRSEFRNAFSRSYVRV 94
A+RKL S FRN F + +RV
Sbjct: 180 ALRKLHGSVFRNIFHTAKIRV 200
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFRNAFSRSYVRVREYDS 99
RKLD ++FR + Y R+ +D
Sbjct: 173 RKLDNTKFR-SHEVGYTRILFFDQ 195
>gi|221483656|gb|EEE21968.1| hypothetical protein TGGT1_121760 [Toxoplasma gondii GT1]
Length = 513
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DDM Y
Sbjct: 124 GPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI----EGGVGVVEYSNGDDMDY 179
Query: 74 AIRKLDRSEFRNAFSRSYVRV 94
A+RKL S FRN F + +RV
Sbjct: 180 ALRKLHGSVFRNIFHTAKIRV 200
>gi|399216785|emb|CCF73472.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Query: 12 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 71
SRG R+DYRV+V LPSSASWQDLKDHMR+AG V +S V R + G V+Y + DM
Sbjct: 89 SRGPPMRTDYRVIVDNLPSSASWQDLKDHMRKAGPVGYSSVNRGK----GYVEYETKKDM 144
Query: 72 KYAIRKLDRSEFRNAFSRSYVRV 94
++A+ LD+SEF+N +S+S +RV
Sbjct: 145 EWALENLDKSEFKNIYSKSIIRV 167
>gi|351700803|gb|EHB03722.1| Splicing factor, arginine/serine-rich 9 [Heterocephalus glaber]
Length = 266
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 16/122 (13%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+R SD+RVLV+GLP S SWQDLKDH+ AGDVC++ V +D GM G+V++ +DM YA+
Sbjct: 151 ARGSDFRVLVSGLPPSGSWQDLKDHIPEAGDVCYADVQKD--GM-GMVEHLRKEDMDYAL 207
Query: 76 RKLDRSEFR-NAFSRSYVRVREYDSRR-----SYSRSPSR---SPYYSRSRSRSPYYSRS 126
RKLD ++FR + SY+RV Y R S+SRS SR SPY +SR PY+S
Sbjct: 208 RKLDDTKFRSHEGETSYIRV--YPERNTSYCYSWSRSGSRDLDSPY--QSRGSPPYFSPF 263
Query: 127 RS 128
RS
Sbjct: 264 RS 265
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|390336105|ref|XP_003724280.1| PREDICTED: serine/arginine-rich splicing factor 1-like
[Strongylocentrotus purpuratus]
Length = 299
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 4/76 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+V+GLPS+ SWQDLKDHMR AGDVC++ V+RD TG+V++ +DMKYA+++LD
Sbjct: 123 YRVIVSGLPSTGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFLRPEDMKYAVKQLDD 179
Query: 81 SEFR-NAFSRSYVRVR 95
++FR + SY+RV+
Sbjct: 180 TKFRSHEGDVSYIRVK 195
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 146 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 202
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 203 RKLDNTKFR 211
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
++++YRV+VTGLP SASWQDLKDHMR+AG+ ++ V +GG GIV + + DDM YA+R
Sbjct: 113 QQTEYRVIVTGLPPSASWQDLKDHMRKAGEPTYTDVDH-KGG--GIVHFRTRDDMDYALR 169
Query: 77 KLDRSEFRNAFSRSYVRV 94
KLD S+FRN F +S + V
Sbjct: 170 KLDGSDFRNPFEKSRISV 187
>gi|428170004|gb|EKX38933.1| hypothetical protein GUITHDRAFT_39633, partial [Guillardia theta
CCMP2712]
Length = 171
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RRSDYRV+++GLP SASWQDLKD R+AG++ ++ V R G GIV++ + DD YAI+
Sbjct: 97 RRSDYRVIISGLPKSASWQDLKDFFRQAGEIVYTDVDRQGG---GIVEFANEDDRDYAIK 153
Query: 77 KLDRSEFRNAFSRSYVRV 94
K D +EF N F R Y+RV
Sbjct: 154 KFDDTEFSNPFDRGYIRV 171
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 15/179 (8%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G +RS+YR++V GLP S SWQD+KDH+++AG++C++ V G+V++ Y++++Y
Sbjct: 103 GPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVH----NGEGVVEFERYENLEY 158
Query: 74 AIRKLDRSEFR-NAFSRSYVRVRE-------YDSRRSYSRSPSRSPYYSRSRSRSPYYSR 125
AIRK D ++FR + +Y+R++E + RR+ S S S+SP R S
Sbjct: 159 AIRKYDDTKFRSHKGETAYIRLKEDKSEYAKENKRRTRSISRSKSPNRGRCSRSSSRSKS 218
Query: 126 SRSPSRSWSYSPRSRSYSPRGKYSR-RSPSLSPARSASQ-RSPSGSPPRSFSRSGSFAR 182
S R+ S S +SRS SP + R RS S SPAR S+ RSP R+ S SG+ AR
Sbjct: 219 SIRGRRTGSAS-KSRSRSPVSRQHRDRSESGSPARRVSRSRSPISRQRRARSESGTPAR 276
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 105 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 161
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 162 RKLDNTKFR 170
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 42/195 (21%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
G + G +RS+YR++V GLP S SWQD+KDH+++AG++C++ V G+V++ Y+
Sbjct: 99 GRNGGPPKRSNYRLIVEGLPRSGSWQDIKDHLKQAGEICYANVH----NGEGVVEFERYE 154
Query: 70 DMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRS 128
D++YA RK D ++FR + +Y+R++E +S Y ++ R+ SRS+S
Sbjct: 155 DLEYAFRKYDDTKFRSHKGETAYIRLKE-----------DKSEYAKENKRRTRSISRSKS 203
Query: 129 PSRSWSY--------------SPRSRSYSPRGKYSR-RSPSLSPARSASQ---------- 163
P R S + +SRS SP ++ R RS S SPAR S+
Sbjct: 204 PIRGRSSSRSKSSIRGRRTGSASKSRSRSPVSRHHRDRSESGSPARRVSRSRSPISRQRP 263
Query: 164 -RSPSGSPPRSFSRS 177
RS SG+P R +RS
Sbjct: 264 ARSESGTPARRATRS 278
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS+ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG++++ +DM YA+
Sbjct: 116 SRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVMEFVRKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|401399758|ref|XP_003880627.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
gi|325115038|emb|CBZ50594.1| cDNA FLJ53078, highly similar to Splicing
factor,arginine/serine-rich 1, related [Neospora caninum
Liverpool]
Length = 448
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 5/91 (5%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G RRS++RV V GLP +ASWQDLKDHMRRAGDV ++ + G G+V+Y++ DM Y
Sbjct: 125 GPPRRSEFRVRVYGLPPTASWQDLKDHMRRAGDVGYANI----DGGVGVVEYSNGSDMDY 180
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYS 104
A+RKL S FRN F + +RV E DS YS
Sbjct: 181 ALRKLHGSVFRNIFHTAKIRV-ERDSAGDYS 210
>gi|334327169|ref|XP_003340840.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 9-like [Monodelphis domestica]
Length = 220
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 62/80 (77%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRRS++RVLV+GLP S SWQDLKDHMR AG VC++ V +D GM G+V++ +DM+YA+
Sbjct: 105 SRRSEFRVLVSGLPPSGSWQDLKDHMREAGGVCYADVQKD--GM-GVVEFLRKEDMEYAL 161
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
R+LD S+FR + SY+RV
Sbjct: 162 RRLDDSKFRSHEGETSYIRV 181
>gi|159163527|pdb|1X4C|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 2
Length = 108
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD +
Sbjct: 17 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNT 73
Query: 82 EFR-NAFSRSYVRVR 95
+FR + +Y+RV+
Sbjct: 74 KFRSHEGETAYIRVK 88
>gi|297693630|ref|XP_002824116.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Pongo
abelii]
Length = 221
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVRKDGVGM---VEYLRKEDMEYAL 162
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKL ++F + SY+RV
Sbjct: 163 RKLHDTKFHSHEGETSYIRV 182
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR++ RV+V+GLP S SWQDLKDHMR AGDVC++ V+RD TG+V+ +DM YA+
Sbjct: 116 SRRAENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVECVPKEDMTYAV 172
Query: 76 RKLDRSEFR 84
RKLD ++FR
Sbjct: 173 RKLDNTKFR 181
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 68/99 (68%), Gaps = 11/99 (11%)
Query: 10 GGSRGV-------SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGI 62
GG RG+ SRRSD RVLV+GLP S SWQDLKDHMR AG VC++ V RD +G+
Sbjct: 96 GGGRGLLETRGTSSRRSDNRVLVSGLPPSGSWQDLKDHMREAGYVCYAAVRRDG---SGV 152
Query: 63 VDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSR 100
V++ +DM YA+RKL+ ++FR + +Y+RVR ++R
Sbjct: 153 VEFVWKEDMSYAVRKLNNTKFRSHKGETAYIRVRIDEAR 191
>gi|432852804|ref|XP_004067393.1| PREDICTED: serine/arginine-rich splicing factor 9-like [Oryzias
latipes]
Length = 146
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 6/116 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR + V V GLP + SWQDLKDHMR AGDVCF+ V RD G+V++ +DM+YA+R
Sbjct: 6 RRREEDVGVPGLPPTGSWQDLKDHMREAGDVCFADVQRD---GEGVVEFLRREDMEYALR 62
Query: 77 KLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSR 131
+LDR+EFR + SY+RV ++ R + S + SRS SR R P+Y+R P R
Sbjct: 63 RLDRTEFRSHQGETSYIRV--FEDRGATSWARSRSRSRSRGRYSPPFYNRGSPPPR 116
>gi|221042258|dbj|BAH12806.1| unnamed protein product [Homo sapiens]
Length = 143
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Query: 8 SSGGS-RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 66
S GG RG + +D R+ V LP SWQDLKDHMR AGDVC++ V+RD TG+V++
Sbjct: 2 SGGGVIRGPAGNNDCRIYVGNLPPGGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFV 58
Query: 67 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 95
+DM YA+RKLD ++FR + +Y+RV+
Sbjct: 59 RKEDMTYAVRKLDNTKFRSHEGETAYIRVK 88
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RRSDYRV+V+ LP SASWQDLKDH R+ G+V ++ V R GIV++ S + + AI+
Sbjct: 89 RRSDYRVIVSNLPPSASWQDLKDHFRQVGEVVYTDVDRSLKSSGGIVEFASRSEQEAAIK 148
Query: 77 KLDRSEFRNAFSRSYVRVR 95
+LD +EF+N F + Y+RV+
Sbjct: 149 QLDDTEFKNPFDKVYIRVK 167
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 51/58 (87%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 58
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ GG
Sbjct: 88 FDRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREGGG 145
>gi|357134013|ref|XP_003568614.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Brachypodium distachyon]
Length = 169
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 47/57 (82%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 57
DR SYSS G R +R S+YRV+VTGLPSSASWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 112 FDRLRSYSSSGRREAARHSNYRVMVTGLPSSASWQDLKDHMRRAGDVCFSDVYREAG 168
>gi|405968123|gb|EKC33223.1| Splicing factor, arginine/serine-rich 1 [Crassostrea gigas]
Length = 232
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+YRVLV+GLP S SWQDLKDHMR AGDVC++ V++D TG+V++ +DMK+A+ KLD
Sbjct: 117 EYRVLVSGLPPSGSWQDLKDHMREAGDVCYTDVYKDG---TGVVEFLRKEDMKHAVSKLD 173
Query: 80 RSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR-SPYYSRSR 127
++FR + SY+RV+E RSR SP YS R
Sbjct: 174 DTKFRSHEGEVSYIRVKEDYRGGGGRSRSRSRSITPPRRSRASPRYSPVR 223
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 13 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 72
R + DY V ++ LP SWQDLKD MR+AGDV F++V RGG GIV+Y++ DMK
Sbjct: 621 RNIRGTGDYTVEISNLPPRVSWQDLKDFMRKAGDVVFTEV-DGRGG--GIVEYSNKRDMK 677
Query: 73 YAIRKLDRSEFRNAFSRSYVRVR 95
YA+ KLD SEFR SYVRVR
Sbjct: 678 YAVEKLDDSEFRGRSENSYVRVR 700
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
R+++YR +VTGLP SASWQDLKDHMR+AGDV ++ V +GG G+V + + + M YA+R
Sbjct: 190 RQTEYRAVVTGLPQSASWQDLKDHMRKAGDVNYADV-DHKGG--GVVHFNNKEGMDYALR 246
Query: 77 KLDRSEFRNAFSRSYVRV 94
KLD SEF N + + + V
Sbjct: 247 KLDGSEFSNRYDTATISV 264
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 9/69 (13%)
Query: 39 DHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA---------IRKLDRSEFRNAFSR 89
DHMR+AGDVCF++V RD G G+VDYT+++DMKYA IRKLD +EFRN ++R
Sbjct: 126 DHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKYAQLTCSSLSQIRKLDDTEFRNPWAR 185
Query: 90 SYVRVREYD 98
+Y+RV+ YD
Sbjct: 186 AYIRVKRYD 194
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 13 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 72
R + ++ V V+ LP SWQDLKD MR+AGDV F++V RGG G+V+Y++ DMK
Sbjct: 97 RNIRGNGEFTVEVSNLPPRVSWQDLKDFMRKAGDVTFTEV-DGRGG--GVVEYSNKRDMK 153
Query: 73 YAIRKLDRSEFRNAFSRSYVRVRE 96
YA+ KLD +EFR SYVRVR+
Sbjct: 154 YAVEKLDDTEFRGRSENSYVRVRQ 177
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RRS+ RVLV+GLP + SWQDLKDHMR AG+V ++ V++D T + ++ +Y+DMK+A++
Sbjct: 117 RRSENRVLVSGLPPTGSWQDLKDHMREAGEVLYADVYKDG---TAVCEFANYEDMKWAVK 173
Query: 77 KLDRSEFR-NAFSRSYVRVR 95
LD S+F+ + ++VRV+
Sbjct: 174 YLDDSKFKSHENETTFVRVK 193
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 70/122 (57%), Gaps = 32/122 (26%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
VSR ++YRVLVTGLPSSASWQDLKDHMR AGDV T ++
Sbjct: 168 VSRHTEYRVLVTGLPSSASWQDLKDHMRNAGDVV-----------------TLKCTVRVV 210
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS---------------RSRSR 119
IRKLD SEF+NAFS++Y+RV+EYD +RS S S SRS +S +
Sbjct: 211 IRKLDDSEFKNAFSKAYIRVKEYDGKRSRSYSRSRSRSRGRSYSRSRSPRSPARSQSPNT 270
Query: 120 SP 121
SP
Sbjct: 271 SP 272
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 12 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 71
S G RRS+ R ++ GLP + SWQD+KDH++ AGD+C++ V R+ GIV++ ++DM
Sbjct: 113 SHGPPRRSENRAIIEGLPPTGSWQDIKDHLKSAGDICYADVGRN---GDGIVEFEKHEDM 169
Query: 72 KYAIRKLDRSEF 83
KYAI+K D ++F
Sbjct: 170 KYAIKKFDDTKF 181
>gi|345571438|gb|EGX54252.1| hypothetical protein AOL_s00004g285 [Arthrobotrys oligospora ATCC
24927]
Length = 377
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 9/135 (6%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP+ SWQDLKD R++G DV FS+V R+R G +GIV++ + DD++ AI
Sbjct: 116 RRTPYRMNISGLPTDTSWQDLKDFARKSGVDVVFSEVSRNRDG-SGIVEFETADDLRIAI 174
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD +F+ S ++ + R SRSP P R SP R SP R Y
Sbjct: 175 NKLDNYDFKGG-RVSCTSDQQARNSRGRSRSP---PPAGRRNGYSPREGRGYSPGRRGGY 230
Query: 136 SPR---SRSYSPRGK 147
SP R YSPRG+
Sbjct: 231 SPHRGGDRGYSPRGR 245
>gi|384950064|gb|AFI38637.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 9/80 (11%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+G SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSG-----SWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 157
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 158 RKLDDTKFRSHEGETSYIRV 177
>gi|383422447|gb|AFH34437.1| serine/arginine-rich splicing factor 9 [Macaca mulatta]
Length = 216
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 9/80 (11%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
+RRSD+RVLV+G SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+
Sbjct: 106 TRRSDFRVLVSG-----SWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYAL 157
Query: 76 RKLDRSEFR-NAFSRSYVRV 94
RKLD ++FR + SY+RV
Sbjct: 158 RKLDDTKFRSHEGETSYIRV 177
>gi|339244049|ref|XP_003377950.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
gi|316973185|gb|EFV56805.1| splicing factor, arginine/serine-rich 1 [Trichinella spiralis]
Length = 300
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 9 SGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 68
+G SR + +R ++GLP+S SWQDLKDHMR AGDVCFS V+++ G+V+Y
Sbjct: 102 NGCRTNASRHTGFRCYISGLPASGSWQDLKDHMREAGDVCFSDVYKNG---NGVVEYMRA 158
Query: 69 DDMKYAIRKLDRSEFR 84
+D++YA+ L+ S FR
Sbjct: 159 EDLEYALANLNESRFR 174
>gi|148687918|gb|EDL19865.1| splicing factor, arginine/serine rich 9, isoform CRA_a [Mus
musculus]
Length = 184
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
+ + + GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKL
Sbjct: 72 AHFPFMTPGLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKL 128
Query: 79 DRSEFR-NAFSRSYVRV 94
D ++FR + SY+RV
Sbjct: 129 DDTKFRSHEGETSYIRV 145
>gi|302828648|ref|XP_002945891.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
gi|300268706|gb|EFJ52886.1| hypothetical protein VOLCADRAFT_72532 [Volvox carteri f.
nagariensis]
Length = 288
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGGMTGIVDYTSYDDMKYAIRKLD 79
+R+ V GLP SASWQDLKD +RR ++++F+D R + G+V++ S DDMK A+RKLD
Sbjct: 108 FRLYVKGLPRSASWQDLKDFVRRVCKPLYTEIFKDHRDNVLGVVEFESKDDMKAALRKLD 167
Query: 80 RSEFRNAFSRS-YVRVRE 96
SEF N F + YVR+ E
Sbjct: 168 DSEFTNPFDKGHYVRLVE 185
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 28 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 86
LP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR +
Sbjct: 94 LPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHE 150
Query: 87 FSRSYVRVR 95
+Y+RV+
Sbjct: 151 GETAYIRVK 159
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 28 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NA 86
LP S SWQDLKDHMR AGDVC++ V+RD TG+V++ +DM YA+RKLD ++FR +
Sbjct: 92 LPPSGSWQDLKDHMREAGDVCYADVYRDG---TGVVEFVRKEDMTYAVRKLDNTKFRSHE 148
Query: 87 FSRSYVRVR 95
+Y+RV+
Sbjct: 149 GETAYIRVK 157
>gi|349604033|gb|AEP99695.1| Splicing factor, arginine/serine-rich 9-like protein, partial
[Equus caballus]
Length = 105
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 27 GLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-N 85
GLP S SWQDLKDHMR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR +
Sbjct: 1 GLPPSGSWQDLKDHMREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSH 57
Query: 86 AFSRSYVRV 94
SY+RV
Sbjct: 58 EGETSYIRV 66
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
DR SSYSS G RG ++R+DYRV+VTGLPSSASWQDLKDHMRRAGDVCFS
Sbjct: 89 DRSSSYSSAGRRGAAKRTDYRVMVTGLPSSASWQDLKDHMRRAGDVCFSD 138
>gi|149390935|gb|ABR25485.1| pre mRNA splicing factor sf2 [Oryza sativa Indica Group]
Length = 154
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 39/42 (92%)
Query: 57 GGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 98
GG GIVDYT+YDDMKYAIRKLD SEF+NAFS++Y+RV+EYD
Sbjct: 2 GGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIRVKEYD 43
>gi|426374380|ref|XP_004054052.1| PREDICTED: serine/arginine-rich splicing factor 9 [Gorilla
gorilla gorilla]
Length = 115
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 25 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 84
GLP S SWQDLKDHMR AGDVC++ V +D GM V+Y +DM+YA+RKLD ++FR
Sbjct: 9 CLGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGM---VEYLRKEDMEYALRKLDDTKFR 65
Query: 85 -NAFSRSYVRV 94
+ SY+RV
Sbjct: 66 SHEGETSYIRV 76
>gi|425767261|gb|EKV05835.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum
PHI26]
gi|425780059|gb|EKV18081.1| Pre-RNA splicing factor Srp2, putative [Penicillium digitatum Pd1]
Length = 303
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP + SWQDLKD R++G DV +S+ R++G G V++ + D+K A+
Sbjct: 99 RRTMFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETASDLKTAV 155
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD+ EF+ + ++ ++ R P R PY SRS R PY P+ Y
Sbjct: 156 EKLDQREFKGSVVSCVADIQNFEER------PVRDPYRSRSPPRRPY------PATMEEY 203
Query: 136 S---PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 204 DRRIPPPRGYSPRDHYRERSP 224
>gi|401397011|ref|XP_003879960.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
gi|325114368|emb|CBZ49925.1| hypothetical protein NCLIV_004090 [Neospora caninum Liverpool]
Length = 378
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
GGS G RR+ +RVLV+ LP WQ LKDHMR+AG V F++V G+V+Y +
Sbjct: 62 GGSAGPPRRTGHRVLVSFLPPGCRWQHLKDHMRKAGPVGFAEVLSQ---GRGVVEYEHPE 118
Query: 70 DMKYAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSR 105
D++YA+R LD++E R S ++V + S R Y R
Sbjct: 119 DLQYAVRSLDKTELRVDGRGSIIKVEKDYSARDYDR 154
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 58
S+YRVLVTGLPSSASWQDLKDHMR+AGDVCFS+V+R+ GG
Sbjct: 109 HSEYRVLVTGLPSSASWQDLKDHMRKAGDVCFSEVYREGGG 149
>gi|226472962|emb|CAX71167.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 161
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 4/64 (6%)
Query: 34 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYV 92
WQDLKDHMR AGDV ++ VFRD TG+V++ Y+DMKYAIR+LD S+FR + SY+
Sbjct: 68 WQDLKDHMREAGDVGYADVFRDG---TGVVEFLRYEDMKYAIRRLDDSKFRSHEGESSYI 124
Query: 93 RVRE 96
RVRE
Sbjct: 125 RVRE 128
>gi|95007448|emb|CAJ20669.1| splicing factor, putative [Toxoplasma gondii RH]
Length = 216
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
GG+ G RR+ +R LV+ LP WQ LKDHMRRAG V F++V G+V++ +
Sbjct: 124 GGASGPPRRTGFRALVSFLPPGCRWQHLKDHMRRAGPVGFAEVLSHG---RGVVEFEHAE 180
Query: 70 DMKYAIRKLDRSEFRNAFSRSYVRVR 95
D+KYA+R LD+SE R S ++VR
Sbjct: 181 DLKYAVRSLDKSEMRVEGRGSVIKVR 206
>gi|255936927|ref|XP_002559490.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584110|emb|CAP92139.1| Pc13g10700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 301
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP + SWQDLKD R++G DV +S+ R++G G V++ + +D+K A+
Sbjct: 97 RRTIFRMQISGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETANDLKTAV 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD+ EF+ + ++ ++ R P R PY SRS R PY P Y
Sbjct: 154 EKLDQREFKGSVVSCVADIQSFEER------PMRDPYRSRSPPRRPY------PVTMDEY 201
Query: 136 S---PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 202 DRRIPPPRGYSPREHYRERSP 222
>gi|428673079|gb|EKX73992.1| pre-mRNA splicing factor, putative [Babesia equi]
Length = 325
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++++ LP WQ LKDHMR+AG V + + RG VD+ DMKYA+RK
Sbjct: 113 RTDYRLVISNLPHGCRWQHLKDHMRKAGPVGYVNIQHGRG----YVDFMHKSDMKYALRK 168
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSR 117
LD +E + + +R+++ D RRS SR R +SR R
Sbjct: 169 LDGTELSTSEDSARIRIKKDDYRRSRSRDAYRRRSHSRGR 208
>gi|159479816|ref|XP_001697982.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158273781|gb|EDO99567.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 320
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD-RGGMTGIVDYTSYD 69
G R + +R+ V LP SASWQDLKD +RR +++VF+D R + G+V++ S +
Sbjct: 123 GYRPIRNTMGFRLYVKNLPRSASWQDLKDFVRRVCKPLYTEVFKDNRDNVVGVVEFESKE 182
Query: 70 DMKYAIRKLDRSEFRNAFSRS-YVRVRE 96
DMK +RKLD +EF N F + YVR+ E
Sbjct: 183 DMKATVRKLDDTEFANPFDKGHYVRLTE 210
>gi|300121283|emb|CBK21663.2| unnamed protein product [Blastocystis hominis]
Length = 381
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
++YRV VT LP SWQDLKDHMR+ GDV + V G GIV+YT+YDDM AI+ L
Sbjct: 94 TNYRVEVTHLPYHCSWQDLKDHMRKEGDVGYCSV----DGGVGIVEYTNYDDMMRAIKYL 149
Query: 79 DRSEFRNAFSRSYVRV 94
D S+ + SY+ V
Sbjct: 150 DDSKCLSRGESSYIHV 165
>gi|328770953|gb|EGF80994.1| hypothetical protein BATDEDRAFT_36927 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 84/155 (54%), Gaps = 11/155 (7%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR DY ++V GLP+ SWQDLKD R+ GDV F+ + D G GIV++TS D AI
Sbjct: 90 RRGDYGIVVQGLPARTSWQDLKDLFRKVGDVIFTNI--DNSG-DGIVEFTSETDKNSAIE 146
Query: 77 KLDRSEFRNAF----SRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRS 132
+ D++EF+ A R ++ D+RRS R S S R SP RS SP R
Sbjct: 147 QFDKTEFQGAVISVKDRDAANGKDSDARRSPDRRGSPGRRSSPGRRSSPRRDRSVSPRRD 206
Query: 133 WSYSP-RSRSYSPRGKYS---RRSPSLSPARSASQ 163
S SP R RS SPR S RR S++P R S+
Sbjct: 207 RSVSPRRDRSVSPRRDRSVSPRRDRSITPPRHHSE 241
>gi|242782227|ref|XP_002479958.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Talaromyces
stipitatus ATCC 10500]
gi|218720105|gb|EED19524.1| electron transfer flavoprotein-ubiquinone oxidoreductase [Talaromyces
stipitatus ATCC 10500]
Length = 1100
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 12/138 (8%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+R G G V++ S+ D+K A+
Sbjct: 894 RRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDG-RGFVEFESHADLKTAV 952
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD E + + D + + R+P R PY SRS R R P +
Sbjct: 953 EKLDGRELKGSQVTCVA-----DVQPAEERAPYRDPYRSRSPPR-----RGYPPMDDYDR 1002
Query: 136 SPRSRSYSPRGKYSRRSP 153
R YSPR Y RSP
Sbjct: 1003 RGPPRGYSPRQHYRERSP 1020
>gi|119187025|ref|XP_001244119.1| hypothetical protein CIMG_03560 [Coccidioides immitis RS]
Length = 398
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G G V++ + D+K AI
Sbjct: 195 RRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAI 252
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ D R P R PY RSRSP R Y
Sbjct: 253 EKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY------------RSRSPVRRGGY 294
Query: 136 SPRS-------RSYSPRGKYSRRSP 153
P R YSPRG Y RSP
Sbjct: 295 PPMDDYDRRPPRGYSPRGHYRERSP 319
>gi|320038617|gb|EFW20552.1| pre-RNA splicing factor Srp2 [Coccidioides posadasii str. Silveira]
gi|392870837|gb|EJB12074.1| pre-RNA splicing factor Srp2 [Coccidioides immitis RS]
Length = 302
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G G V++ + D+K AI
Sbjct: 99 RRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAI 156
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ D R P R PY RSRSP R Y
Sbjct: 157 EKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY------------RSRSPVRRGGY 198
Query: 136 SPRS-------RSYSPRGKYSRRSP 153
P R YSPRG Y RSP
Sbjct: 199 PPMDDYDRRPPRGYSPRGHYRERSP 223
>gi|392870838|gb|EJB12075.1| pre-RNA splicing factor Srp2, variant [Coccidioides immitis RS]
Length = 399
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G G V++ + D+K AI
Sbjct: 196 RRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAI 253
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ D R P R PY RSRSP R Y
Sbjct: 254 EKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY------------RSRSPVRRGGY 295
Query: 136 SPRS-------RSYSPRGKYSRRSP 153
P R YSPRG Y RSP
Sbjct: 296 PPMDDYDRRPPRGYSPRGHYRERSP 320
>gi|124802534|ref|XP_001347501.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
gi|23495082|gb|AAN35414.1|AE014832_36 pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7]
Length = 538
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ RV+VT LP + WQ LKD MR+ GDV ++ + R + GIV++ SYDDM YAI K
Sbjct: 107 RTENRVIVTNLPDNCRWQHLKDIMRQCGDVGYANIERGK----GIVEFVSYDDMLYAIEK 162
Query: 78 LDRSEFRNAFSRSYVRVR 95
D +EF+ + ++VR
Sbjct: 163 FDGAEFKVYDDVTNIKVR 180
>gi|303317336|ref|XP_003068670.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108351|gb|EER26525.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ RD G G V++ + D+K AI
Sbjct: 97 RRTPYRMQISGLPET-SWQDLKDFARQSGLDVVYSETLRDHEG-RGFVEFETGADLKTAI 154
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ D R P R PY RSRSP R Y
Sbjct: 155 EKLDGREFKGSRVTCTQDIQAPDDR------PVRDPY------------RSRSPVRRGGY 196
Query: 136 SPRS-------RSYSPRGKYSRRSP 153
P R YSPRG Y RSP
Sbjct: 197 PPMDDYDRRPPRGYSPRGHYRERSP 221
>gi|212526968|ref|XP_002143641.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
gi|210073039|gb|EEA27126.1| pre-RNA splicing factor Srp2, putative [Talaromyces marneffei ATCC
18224]
Length = 261
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 12/139 (8%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ V+GLP+ SWQDLKD R++G DV +S+ R+R G G V++ S+ D+K A+
Sbjct: 57 RRTVFRMQVSGLPTETSWQDLKDFARQSGLDVVYSETTRERDGR-GFVEFESHADLKTAV 115
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD E + + D + + R P R PY SRS R R P+ +
Sbjct: 116 EKLDGRELKGSQVTCVA-----DVQPAEERPPYRDPYRSRSPPR-----RGYPPTDEYDR 165
Query: 136 SPRSRSYSPRGKYSRRSPS 154
R YSPR Y RSP
Sbjct: 166 RGPPRGYSPRPHYRERSPQ 184
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%), Gaps = 4/63 (6%)
Query: 35 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVR 93
+DLKDHMR AGDVC++ V RD TG+V++T YDD+KYAIRKLD ++FR + +Y+R
Sbjct: 113 KDLKDHMREAGDVCYADVARD---GTGVVEFTRYDDVKYAIRKLDDTKFRSHEGETAYIR 169
Query: 94 VRE 96
VRE
Sbjct: 170 VRE 172
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+ YRV+V L S SWQDLKD++R+AGDV F++ + GIVD+ +YDDMK AI K
Sbjct: 151 RTKYRVIVENLSSRVSWQDLKDYLRQAGDVSFAEAHQSVQN-EGIVDFATYDDMKAAIEK 209
Query: 78 LDRSEF 83
LD +E
Sbjct: 210 LDDTEL 215
>gi|340371197|ref|XP_003384132.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Amphimedon
queenslandica]
Length = 242
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
+S +++++TGLP + SWQD+KDH R+AGDV ++ V RD TG+V++ Y+ K A+R
Sbjct: 114 QSGHKLMITGLPPTGSWQDIKDHFRQAGDVIYANVERD---GTGVVEFARYEHAKRAVRD 170
Query: 78 LDRSEFRNAFSRS-YVRVRE 96
LD S+FR+ S Y+RV E
Sbjct: 171 LDDSKFRSHEGESAYIRVSE 190
>gi|156082103|ref|XP_001608544.1| pre-mRNA splicing factor [Plasmodium vivax Sal-1]
gi|148801115|gb|EDL42520.1| pre-mRNA splicing factor, putative [Plasmodium vivax]
Length = 544
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++++ LP S WQ LKD MR+ GDV ++ + R RG +V++ S DDM YAI K
Sbjct: 110 RTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANIERGRG----VVEFISRDDMLYAIEK 165
Query: 78 LDRSEFRNAFSRSYVRVR 95
D SEF+ + ++VR
Sbjct: 166 FDGSEFKVYDDVTNIKVR 183
>gi|389582698|dbj|GAB65435.1| pre-mRNA splicing factor, partial [Plasmodium cynomolgi strain B]
Length = 450
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++++ LP S WQ LKD MR+ GDV ++ + R +G +V++ + DDM YAI K
Sbjct: 16 RTEHRIIISNLPESCKWQHLKDAMRQCGDVGYANIERGKG----VVEFINRDDMLYAIEK 71
Query: 78 LDRSEFRNAFSRSYVRVR 95
D SEF+ + ++VR
Sbjct: 72 FDGSEFKVYDDVTNIKVR 89
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 7 YSSGGS--RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVD 64
YS+G S RG RR+DYR+ VT LP + SWQDLKD+M R G V + + R G G+V+
Sbjct: 81 YSTGDSIRRGPPRRTDYRIEVTHLPHNCSWQDLKDYMSRIGPVGYCDI---RHGY-GVVE 136
Query: 65 YTSYDDMKYAIRKLDRSEFRNAFSRSYVRV 94
+ Y+DMK A+RKLD ++ + +Y+ V
Sbjct: 137 FIHYEDMKRAVRKLDDTKMYSNGESNYIHV 166
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G + +RR+++R+ V GL S SWQDLKD R+AG V +S VF +G G+V+Y S DD
Sbjct: 78 GPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDD 137
Query: 71 MKYAIRKLDRSEFRNAFSRSYVRVRE 96
MK AIR LD + Y+RVRE
Sbjct: 138 MKAAIRTLDDTR----LGGKYIRVRE 159
>gi|384498124|gb|EIE88615.1| hypothetical protein RO3G_13326 [Rhizopus delemar RA 99-880]
Length = 429
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
D + + SG SR RS YRV++ LP +WQD+KD MR+AG V F+ V +D G G
Sbjct: 237 DLHGTKVSGSSR--EERS-YRVVIKNLPPRTTWQDVKDFMRKAGRVVFADVLKDCDG-EG 292
Query: 62 IVDYTSYDDMKYAIRKLD 79
+V++ YDDMKYA+R+LD
Sbjct: 293 VVEFAQYDDMKYALRELD 310
>gi|221053983|ref|XP_002261739.1| pre-mRNA splicing factor [Plasmodium knowlesi strain H]
gi|193808199|emb|CAQ38902.1| pre-mRNA splicing factor, putative [Plasmodium knowlesi strain H]
Length = 495
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++++ LP S WQ LKD MR+ GDV ++ V R +G +V++ S DDM YAI K
Sbjct: 110 RTEHRIIISNLPESCKWQHLKDVMRQCGDVGYANVERGKG----VVEFISRDDMLYAIEK 165
Query: 78 LDRSEFRNAFSRSYVRVR 95
D SEF+ + ++VR
Sbjct: 166 FDGSEFKVYDDVTNIKVR 183
>gi|395854494|ref|XP_003799724.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Otolemur
garnettii]
Length = 179
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
Query: 7 YSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 66
+ G G S +D + V LP SWQDLKDH R AGDVC++ +++D T +V++
Sbjct: 38 WGGGVIHGPSWNNDCSIFVGNLPPGGSWQDLKDHPREAGDVCYADIYQD---TTSVVEFV 94
Query: 67 SYDDMKYAIRKLDRSEFR-NAFSRSYVRVREYDSRRSYSRSPSRSPYYS--RSRSRSPYY 123
+D+ YAI +LD ++FR + +Y++V + RSP Y S+S S
Sbjct: 95 QKEDITYAIEELDNTKFRSHEGETAYIQV---------NVDGPRSPSYGRSPSQSHSSSR 145
Query: 124 SRSRSPSRSWSYSPRSRSYSPR 145
S SR S+S SY+PR SPR
Sbjct: 146 SGSRGNSKSPSYAPRRSRASPR 167
>gi|198432077|ref|XP_002131581.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 332
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L + +WQ+LKDH+R+AG++ ++ + R G+VD+ SYDDMK AI K
Sbjct: 121 RTEYRVIVENLSTRVAWQELKDHLRQAGEITYADAHKHRRN-EGVVDFASYDDMKNAIEK 179
Query: 78 LDRSEF 83
+ +E
Sbjct: 180 FNNTEL 185
>gi|67537616|ref|XP_662582.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|40741866|gb|EAA61056.1| hypothetical protein AN4978.2 [Aspergillus nidulans FGSC A4]
gi|259482149|tpe|CBF76354.1| TPA: pre-RNA splicing factor Srp2, putative (AFU_orthologue;
AFUA_3G10100) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R++++GLP + SWQDLKD R++G DV +S+ R+ G GIV++ + +D+K A+
Sbjct: 99 RRTIFRMIISGLPET-SWQDLKDFARQSGLDVVYSETGREPG--RGIVEFETANDLKTAV 155
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ ++ YD R P R PY SRS R Y R +S
Sbjct: 156 EKLDGREFKGTRVTCVPDIQPYDDR------PYRDPYRSRSPRRG--YPPMDEYDRRYSV 207
Query: 136 SPRSRSYSPRGKYSRRSP 153
R YSPR Y RSP
Sbjct: 208 ---PRGYSPRSHYRERSP 222
>gi|317143798|ref|XP_003189536.1| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
Length = 299
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR++V+GLP + SWQDLKD R AG DV +S+ R+ G G V++ + +D+K AI
Sbjct: 99 RRTVYRMMVSGLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAI 155
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD +F+ + ++ D R P R PY RSRSP RS P +
Sbjct: 156 EKLDGRDFKGSRVSCVADIQPVDER------PFRDPY----RSRSP--RRSYPPVDEYDR 203
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 204 RFPPPRGYSPRAHYRERSP 222
>gi|317036141|ref|XP_001397700.2| pre-RNA splicing factor Srp2 [Aspergillus niger CBS 513.88]
gi|358368362|dbj|GAA84979.1| pre-RNA splicing factor Srp2 [Aspergillus kawachii IFO 4308]
Length = 301
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 16/139 (11%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R++V+GLP + SWQDLKD R++G DV +S+ R+ G G V++ + +D+K AI
Sbjct: 99 RRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAI 155
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ Y R+ R PY RSRSP RS P +
Sbjct: 156 EKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----RSRSP--RRSYPPMDEYDR 204
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 205 RFPAPRGYSPRAHYRERSP 223
>gi|134083249|emb|CAK46820.1| unnamed protein product [Aspergillus niger]
Length = 367
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 16/139 (11%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R++V+GLP + SWQDLKD R++G DV +S+ R+ G G V++ + +D+K AI
Sbjct: 97 RRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAI 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ Y R+ R PY RSRSP RS P +
Sbjct: 154 EKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----RSRSP--RRSYPPMDEYDR 202
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 203 RFPAPRGYSPRAHYRERSP 221
>gi|341902095|gb|EGT58030.1| CBN-RSP-3 protein [Caenorhabditis brenneri]
Length = 275
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 11 GSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
G G RRSD+RV V G+P + SWQDLKDH R AG++CF+ + ++ TGIV++
Sbjct: 105 GPGGPQRRSDFRVFVEGIPQTGSWQDLKDHFRPAGEICFAMISHNK---TGIVEFEKKSS 161
Query: 71 MKYAIRKLDRSEF 83
++ +I D++EF
Sbjct: 162 VQRSIDIFDKTEF 174
>gi|83767572|dbj|BAE57711.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867601|gb|EIT76847.1| alternative splicing factor SRp55/B52/SRp75 [Aspergillus oryzae
3.042]
Length = 298
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR++V+GLP + SWQDLKD R AG DV +S+ R+ G G V++ + +D+K AI
Sbjct: 97 RRTVYRMMVSGLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAI 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD +F+ + ++ D R P R PY RSRSP RS P +
Sbjct: 154 EKLDGRDFKGSRVSCVADIQPVDER------PFRDPY----RSRSP--RRSYPPVDEYDR 201
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 202 RFPPPRGYSPRAHYRERSP 220
>gi|238487096|ref|XP_002374786.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
gi|317143800|ref|XP_001819713.2| pre-RNA splicing factor Srp2 [Aspergillus oryzae RIB40]
gi|220699665|gb|EED56004.1| pre-RNA splicing factor Srp2, putative [Aspergillus flavus
NRRL3357]
Length = 300
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR++V+GLP + SWQDLKD R AG DV +S+ R+ G G V++ + +D+K AI
Sbjct: 99 RRTVYRMMVSGLPET-SWQDLKDFARGAGLDVVYSETGREPG--RGFVEFETANDLKTAI 155
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD +F+ + ++ D R P R PY RSRSP RS P +
Sbjct: 156 EKLDGRDFKGSRVSCVADIQPVDER------PFRDPY----RSRSP--RRSYPPVDEYDR 203
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 204 RFPPPRGYSPRAHYRERSP 222
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 50/70 (71%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G R +++R+++ L S A+W+D+KD+MR+AGDV F+ + G G+VD+ +YDDMK
Sbjct: 97 GRPRNTEWRLVINNLSSRATWRDIKDYMRQAGDVTFADAHKQLGEGRGVVDFATYDDMKD 156
Query: 74 AIRKLDRSEF 83
A+++LD +E
Sbjct: 157 ALKRLDGTEL 166
>gi|350633625|gb|EHA21990.1| hypothetical protein ASPNIDRAFT_56436 [Aspergillus niger ATCC 1015]
Length = 299
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 16/139 (11%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R++V+GLP + SWQDLKD R++G DV +S+ R+ G G V++ + +D+K AI
Sbjct: 97 RRTIFRMMVSGLPET-SWQDLKDFARQSGLDVVYSETGRELG--RGFVEFETANDLKTAI 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ Y R+ R PY RSRSP RS P +
Sbjct: 154 EKLDGREFKGSRVTCIADIQTYPDERAI-----RDPY----RSRSP--RRSYPPMDEYDR 202
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 203 RFPAPRGYSPRAHYRERSP 221
>gi|156402923|ref|XP_001639839.1| predicted protein [Nematostella vectensis]
gi|156226970|gb|EDO47776.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
++YR++V L + A WQDLKD+MR+AG+V F+Q +DR G G+ D+++ DM YA++KL
Sbjct: 103 TEYRLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVG-EGVCDFSNESDMLYALKKL 161
Query: 79 DRSEF 83
D +E
Sbjct: 162 DGTEL 166
>gi|296824244|ref|XP_002850623.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
gi|238838177|gb|EEQ27839.1| pre-mRNA splicing factor [Arthroderma otae CBS 113480]
Length = 363
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 13/138 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+
Sbjct: 158 RRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAV 214
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD ++F+ + ++ R + PY SRS R P Y P+ +
Sbjct: 215 EKLDGTDFKGSRVTCTADIQPPMEDRV-----PKDPYRSRSPRRGPPYP----PAEDYDR 265
Query: 136 SPRSRSYSPRGKYSRRSP 153
R YSPRG Y RSP
Sbjct: 266 RGPPRGYSPRGHYRERSP 283
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++++ LP WQ LKDHMR+AG V + + + G VDY DMKYAIRK
Sbjct: 116 RTDYRLVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK----GFVDYMHKSDMKYAIRK 171
Query: 78 LDRSEFRNAFSRSYVRVRE 96
LD SE +RV++
Sbjct: 172 LDGSELTTPDDSCRIRVKK 190
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
Y V V+GLP + SWQDLKDHMR AG+ + VFR G G V + S DM+YAI K D
Sbjct: 104 YIVEVSGLPPTGSWQDLKDHMREAGECAHADVFR---GGVGEVSFYSRSDMEYAIDKFDG 160
Query: 81 SEFR-NAFSRSYVRVRE 96
S F+ + +S +RVRE
Sbjct: 161 STFKSHEGEKSKIRVRE 177
>gi|156356000|ref|XP_001623720.1| predicted protein [Nematostella vectensis]
gi|156210446|gb|EDO31620.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
RS++RV+V L + A W +LK+ M AG+VC++ R R G G+V++T+ +DMK AI
Sbjct: 99 RSEFRVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPG-EGVVEFTTEEDMKRAIAS 157
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSP 111
LD+ EF +R+R+ R S+S SRSP
Sbjct: 158 LDKCEFYG----KRIRLRQELPRSGTSKSRSRSP 187
>gi|83273559|ref|XP_729451.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii]
Length = 516
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V+ LP + WQ LKD MR+ GDV ++ + + GIV++ D M YAI K
Sbjct: 108 RTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK----GIVEFVDRDGMLYAIEK 163
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 114
DR+EF+ + ++VR SY + RS YYS
Sbjct: 164 FDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 199
>gi|427777415|gb|JAA54159.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 484
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYRV++ L S SWQDLKD MR+ GDV ++ R R G+V++ SY DMK AI K
Sbjct: 97 RTDYRVIIENLSSRISWQDLKDRMRQVGDVTYADAHRHRRN-EGVVEFASYSDMKRAIEK 155
Query: 78 LDRSEF 83
LD +E
Sbjct: 156 LDNTEI 161
>gi|68066368|ref|XP_675167.1| pre-mRNA splicing factor [Plasmodium berghei strain ANKA]
gi|56494193|emb|CAH97347.1| pre-mRNA splicing factor, putative [Plasmodium berghei]
Length = 457
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V+ LP + WQ LKD MR+ GDV ++ + + GIV++ D M YAI K
Sbjct: 74 RTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK----GIVEFVDRDGMLYAIEK 129
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 114
DR+EF+ + ++VR SY + RS YYS
Sbjct: 130 FDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 165
>gi|326471023|gb|EGD95032.1| pre-RNA splicing factor Srp2 [Trichophyton tonsurans CBS 112818]
Length = 317
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+
Sbjct: 112 RRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAV 168
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD ++F+ + ++ R R PY SRS R P Y P +
Sbjct: 169 EKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRGPPYP----PVDEYDR 219
Query: 136 SPRSRSYSPRGKYSRRSP 153
R YSPRG Y RSP
Sbjct: 220 RGPPRGYSPRGHYRERSP 237
>gi|326482144|gb|EGE06154.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 304
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+
Sbjct: 99 RRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAV 155
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD ++F+ + ++ R R PY SRS R P Y P +
Sbjct: 156 EKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRGPPYP----PVDEYDR 206
Query: 136 SPRSRSYSPRGKYSRRSP 153
R YSPRG Y RSP
Sbjct: 207 RGPPRGYSPRGHYRERSP 224
>gi|198415633|ref|XP_002121331.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
[Ciona intestinalis]
Length = 292
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L + SWQDLKD++R AG+V ++ + R G+VD+ +YDDMK AI K
Sbjct: 126 RTNYRVIVENLSTRVSWQDLKDYLREAGEVTYADAHKHRRN-EGVVDFATYDDMKRAIDK 184
Query: 78 LDRSEF 83
LD +E
Sbjct: 185 LDNTEI 190
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G + D++ A+R LD
Sbjct: 131 YRVVVTNLPRGASWQDLKDRMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 187
Query: 81 SEFRNAF-SRSYVRVREYDSRR 101
+E ++ F S +RV E++ +
Sbjct: 188 TEMKSHFGDTSIIRVEEFNEEK 209
>gi|340378226|ref|XP_003387629.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Amphimedon
queenslandica]
Length = 309
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+D+R+LV + S SWQDLKD MR AG++ ++ + + G GIV+Y +Y+DMK AIRK
Sbjct: 112 RTDFRILVENVSSRVSWQDLKDFMRTAGEITYADAHKQKTG-EGIVEYATYEDMKNAIRK 170
Query: 78 LDRSEF 83
L+ ++
Sbjct: 171 LNGTDL 176
>gi|315055555|ref|XP_003177152.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
gi|311338998|gb|EFQ98200.1| hypothetical protein MGYG_01236 [Arthroderma gypseum CBS 118893]
Length = 371
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ +TGLP + SWQDLKD R++G DV +S+ RDR G G V++ + +D++ A+
Sbjct: 166 RRTIYRMQITGLPET-SWQDLKDFARQSGLDVVYSET-RDRDG-KGFVEFENGNDLRTAV 222
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD ++F+ + ++ R R PY SRS R P Y P +
Sbjct: 223 EKLDGTDFKGSRVTCTADIQPPMEDRV-----PRDPYRSRSPRRGPPYP----PVDDYDR 273
Query: 136 SPRSRSYSPRGKYSRRSP 153
R YSPRG Y RSP
Sbjct: 274 RGPPRGYSPRGHYRERSP 291
>gi|70945413|ref|XP_742529.1| pre-mRNA splicing factor [Plasmodium chabaudi chabaudi]
gi|56521563|emb|CAH75989.1| pre-mRNA splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 373
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V+ LP + WQ LKD MR+ GDV ++ + + GIV++ D M YAI K
Sbjct: 107 RTEHRIIVSNLPDNCKWQHLKDIMRQCGDVGYANIEHGK----GIVEFVDRDGMLYAIEK 162
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYS 114
DR+EF+ + ++VR SY + RS YYS
Sbjct: 163 FDRAEFKVHDQVTNIKVRRDKRSLSYIK-KHRSDYYS 198
>gi|147904116|ref|NP_001079647.1| serine/arginine-rich splicing factor 6 [Xenopus laevis]
gi|28436899|gb|AAH46668.1| MGC52985 protein [Xenopus laevis]
Length = 667
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 103 RTEFRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMKRAVEK 161
Query: 78 LDRSEF 83
LD +E
Sbjct: 162 LDGTEI 167
>gi|62089298|dbj|BAD93093.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 419
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 26 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 84
Query: 78 LDRSEF 83
LD +E
Sbjct: 85 LDGTEV 90
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 103 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMKRAMEK 161
Query: 78 LDRSEF 83
LD +E
Sbjct: 162 LDGTEI 167
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|449488807|ref|XP_002189002.2| PREDICTED: serine/arginine-rich splicing factor 4 [Taeniopygia
guttata]
Length = 446
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 70 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRALEK 128
Query: 78 LDRSEF 83
LD +E
Sbjct: 129 LDGTEV 134
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++++ LP WQ LKDHMR+AG V + + + G VD+ DMKYAIRK
Sbjct: 116 RTDYRLVISNLPHGCRWQHLKDHMRKAGPVGYVNIVHGK----GFVDFLHKSDMKYAIRK 171
Query: 78 LDRSEFRNAFSRSYVRVRE 96
LD SE +RV++
Sbjct: 172 LDGSELSTPDDSCRIRVKK 190
>gi|84996527|ref|XP_952985.1| splicing factor [Theileria annulata strain Ankara]
gi|65303981|emb|CAI76360.1| splicing factor, putative [Theileria annulata]
Length = 269
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G +RR Y + VTGLP + SWQDLKDHMR AG+ + VFR G G + + S DM Y
Sbjct: 96 GTTRRGKYVLEVTGLPPTGSWQDLKDHMRDAGECGHADVFR---GGVGEITFFSRSDMDY 152
Query: 74 AIRKLDRSEFR 84
AI + D S FR
Sbjct: 153 AIERFDGSTFR 163
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|22268151|gb|AAH26944.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ SY DMK AI K
Sbjct: 105 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASYSDMKNAIDK 163
Query: 78 LDRSEF 83
LD +E
Sbjct: 164 LDDTEL 169
>gi|449273171|gb|EMC82779.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 417
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 63 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR-KNEGVIEFKSYSDMKRALEK 121
Query: 78 LDRSEF 83
LD +E
Sbjct: 122 LDGTEV 127
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
GG R R+D+R+ V+ LP SWQDLKD+ + GDV ++ V R+ G+V++ + +
Sbjct: 89 GGGRN---RTDFRLEVSDLPDRTSWQDLKDYFKPVGDVLYADVSRN---GEGVVEFATKE 142
Query: 70 DMKYAIRKLDRSEFRNAFSRSYVRVR 95
DM A RKLD S FRN F +RVR
Sbjct: 143 DMFAAKRKLDGSTFRNPFDSREIRVR 168
>gi|345793997|ref|XP_865416.2| PREDICTED: serine/arginine-rich splicing factor 4 isoform 3 [Canis
lupus familiaris]
Length = 469
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 70 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 128
Query: 78 LDRSEF 83
LD +E
Sbjct: 129 LDGTEV 134
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ SY DMK AI K
Sbjct: 115 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASYSDMKNAIDK 173
Query: 78 LDRSEF 83
LD +E
Sbjct: 174 LDDTEL 179
>gi|146323402|ref|XP_754610.2| pre-RNA splicing factor Srp2 [Aspergillus fumigatus Af293]
gi|129558308|gb|EAL92572.2| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
Af293]
gi|159127623|gb|EDP52738.1| pre-RNA splicing factor Srp2, putative [Aspergillus fumigatus
A1163]
Length = 272
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G G V++ + D+K AI
Sbjct: 72 RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETAADLKTAI 128
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ +D R R PY RSRSP RS P +
Sbjct: 129 DKLDGREFKGSRVSCVADIQPHDDRI------FRDPY----RSRSP--RRSYPPIDEYDR 176
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 177 RFPAPRGYSPRAHYRERSP 195
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|294890805|ref|XP_002773323.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239878375|gb|EER05139.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 317
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G + D++ A+R LD
Sbjct: 132 YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 188
Query: 81 SEFRNAF-SRSYVRVREY 97
+E ++ F S +RV E+
Sbjct: 189 TEMKSHFGDTSIIRVEEF 206
>gi|241846316|ref|XP_002415562.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215509774|gb|EEC19227.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 355
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYRV++ L S SWQDLKD MR+ GDV ++ R R G+V++ SY DM+ AI K
Sbjct: 115 RTDYRVIIENLSSRISWQDLKDRMRQVGDVTYADAHR-RKRNEGVVEFASYSDMRRAIDK 173
Query: 78 LDRSEF 83
LD +E
Sbjct: 174 LDNTEL 179
>gi|119491909|ref|XP_001263449.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
gi|119411609|gb|EAW21552.1| pre-RNA splicing factor Srp2, putative [Neosartorya fischeri NRRL
181]
Length = 258
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+LV+GLP + SWQDLKD R++G DV +S+ R++G G V++ + D+K AI
Sbjct: 57 RRTIFRMLVSGLPET-SWQDLKDFARQSGLDVVYSETGREQG--RGFVEFETAADLKTAI 113
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ +D R R PY RSRSP RS P +
Sbjct: 114 DKLDGREFKGSRVSCVADIQPHDDRI------FRDPY----RSRSP--RRSYPPIDEYDR 161
Query: 136 S-PRSRSYSPRGKYSRRSP 153
P R YSPR Y RSP
Sbjct: 162 RFPAPRGYSPRAHYRERSP 180
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|428162693|gb|EKX31812.1| hypothetical protein GUITHDRAFT_82780, partial [Guillardia theta
CCMP2712]
Length = 208
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RRSD+R++++GLP SASWQDLKD R AG+V FS V R G GIV++ + D +YAI
Sbjct: 105 RRSDHRIIISGLPPSASWQDLKDFFRSAGEVIFSDVDRQGG---GIVEFANKSDQEYAIS 161
Query: 77 KL 78
K+
Sbjct: 162 KV 163
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD+MR+AG+V F+ + GIV++ +Y DMK A+ K
Sbjct: 117 RTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKN-EGIVEFATYSDMKNAVEK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDGTEI 181
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|378727012|gb|EHY53471.1| hypothetical protein HMPREF1120_01663 [Exophiala dermatitidis
NIH/UT8656]
Length = 316
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 71/145 (48%), Gaps = 17/145 (11%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG--DVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
RR+ YR+ +TGL SWQDLKD R +G DV +S+ R+R G G V++ + D+K A
Sbjct: 98 RRTIYRMQITGLQPDTSWQDLKDFARNSGQLDVVYSETGRERDG-KGFVEFETQADLKTA 156
Query: 75 IRKLDRSEFRNAFSRSYVRVR-EYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSW 133
+ KLD F+ A ++ E RSY + RSP R Y+ R P R W
Sbjct: 157 VEKLDGQTFKGATVHCVADIQDERPDMRSYRQ---RSPPRGRYGPMDDYHDRRGPPQRGW 213
Query: 134 SYSPRSRSYSPRG-KYSRRSPSLSP 157
SPRG Y RSP P
Sbjct: 214 ---------SPRGSGYRERSPGRRP 229
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 35/191 (18%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 122 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 180
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSY--------------------SRSPSRSPYYSRSR 117
LD +E R+R + +R S +PS +P +
Sbjct: 181 LDDTELNGR------RIRLIEDKRQVAVVPVAAAVAVAVPNQEHIRSPNPSLNPNLRNAA 234
Query: 118 SRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFSRS 177
+ P ++ + SR+ S SP +P R SP RS +P S P+ R+
Sbjct: 235 AHVPNPNQETAQSRNLSQSP-----NPDLVLGPRLRGQSPGRSP---NPKPSLPQRIDRA 286
Query: 178 GSFARTWGVGY 188
S +G+
Sbjct: 287 ASAHEVTDLGH 297
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|355557751|gb|EHH14531.1| hypothetical protein EGK_00474, partial [Macaca mulatta]
Length = 477
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 84 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 142
Query: 78 LDRSEF 83
LD +E
Sbjct: 143 LDGTEV 148
>gi|354472339|ref|XP_003498397.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cricetulus
griseus]
Length = 476
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 86 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 144
Query: 78 LDRSEF 83
LD +E
Sbjct: 145 LDGTEV 150
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|449296860|gb|EMC92879.1| hypothetical protein BAUCODRAFT_114866 [Baudoinia compniacensis
UAMH 10762]
Length = 326
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMK 72
RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R GG G V+Y + D+
Sbjct: 105 RRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVARERDASGGGKGFVEYETAQDLA 164
Query: 73 YAIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYY 113
A+ KLD +F+ + R + + D R R SRSP Y
Sbjct: 165 SAVEKLDNHDFKGSTVRC-ISDPQADIPRPRERFRSRSPGY 204
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|294899382|ref|XP_002776614.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239883668|gb|EER08430.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 138
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YRV+VT LP ASWQDLKD MR AG+ F++V RD G+ G + D++ A+R LD
Sbjct: 41 YRVVVTNLPRGASWQDLKDKMRDAGECRFTEVTRDGVGVAG---FAGQSDVERAVRTLDD 97
Query: 81 SEFRNAF-SRSYVRVREYDSRR 101
+E ++ F S +RV E+ +
Sbjct: 98 TEMKSHFGDTSIIRVEEFTDEK 119
>gi|338721826|ref|XP_001500325.3| PREDICTED: serine/arginine-rich splicing factor 4 [Equus caballus]
Length = 497
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 97 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 155
Query: 78 LDRSEF 83
LD +E
Sbjct: 156 LDGTEV 161
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|345315998|ref|XP_001512981.2| PREDICTED: hypothetical protein LOC100082305, partial
[Ornithorhynchus anatinus]
Length = 393
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 90 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGR-KNEGVIEFVSYSDMKRALEK 148
Query: 78 LDRSEF 83
LD +E
Sbjct: 149 LDGTEV 154
>gi|403224084|dbj|BAM42214.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 259
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 8 SSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYT 66
+SGGSR RR Y + VTGLP S SWQDLKDHMR AG + VFR G G + +
Sbjct: 87 ASGGSRRHGPRRGKYVLEVTGLPPSGSWQDLKDHMRDAGHCGHADVFR---GGVGEISFF 143
Query: 67 SYDDMKYAIRKLDRSEFR 84
S DM+YAI K D S F+
Sbjct: 144 SRSDMEYAIEKYDGSTFK 161
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD+MR+AG+V F+ + GIV++ +Y DMK A+ K
Sbjct: 164 RTEFRIVVENLSSRVSWQDLKDYMRQAGEVTFADAHKQHKN-EGIVEFATYSDMKNAVEK 222
Query: 78 LDRSEF 83
LD +E
Sbjct: 223 LDGTEI 228
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 9 SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 67
SGGSR G R+++R++V L S SWQDLKD MR+ G+V F R + G+V++ S
Sbjct: 100 SGGSRYGPPVRTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTKKN-EGVVEFAS 158
Query: 68 YDDMKYAIRKLDRSEF 83
+ DMK AI KLD ++
Sbjct: 159 HSDMKNAIEKLDGTDL 174
>gi|384494440|gb|EIE84931.1| hypothetical protein RO3G_09641 [Rhizopus delemar RA 99-880]
Length = 252
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
RS YR++V + +WQDLKD MR+AG+V F+ + RDR GIV++ DDM+YA++K
Sbjct: 89 RSHYRLIVENIAPGTNWQDLKDMMRKAGEVTFADISRDRPS-EGIVEFHVRDDMEYALKK 147
Query: 78 LDRSEF 83
L+ E
Sbjct: 148 LNDREL 153
>gi|395522106|ref|XP_003765081.1| PREDICTED: serine/arginine-rich splicing factor 4 [Sarcophilus
harrisii]
Length = 338
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 96 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 154
Query: 78 LDRSEF 83
LD +E
Sbjct: 155 LDGTEV 160
>gi|386765708|ref|NP_788671.2| B52, isoform M [Drosophila melanogaster]
gi|386765712|ref|NP_001014619.2| B52, isoform O [Drosophila melanogaster]
gi|312596948|gb|ADQ89797.1| GH20537p [Drosophila melanogaster]
gi|383292689|gb|AAN13579.2| B52, isoform M [Drosophila melanogaster]
gi|383292691|gb|AAX52949.2| B52, isoform O [Drosophila melanogaster]
Length = 355
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDDTEL 181
>gi|8497|emb|CAA41556.1| SRp55 [Drosophila melanogaster]
Length = 350
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 112 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 170
Query: 78 LDRSEF 83
LD +E
Sbjct: 171 LDDTEL 176
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
+R + G R +RR YRVL+ G+ SWQDLKD R AG V FS + R+ G G
Sbjct: 78 ERGGGFEERGPRPFTRRPGYRVLIHGVSRDTSWQDLKDFGREAGAVTFSDLDRENPG-EG 136
Query: 62 IVDYTSYDDMKYAIRKLDRSEFRNAFSR-------------SYVRVREYDSRRSYSRSPS 108
I++Y + DD++ A+R L+ E R R Y R +E+ RR SRSP
Sbjct: 137 ILEYLTPDDLENALRLLNNRELRGVTVRVSRGEGGLGGSGVDYSRDKEF--RRDRSRSPG 194
Query: 109 R 109
R
Sbjct: 195 R 195
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY D+K A+ K
Sbjct: 109 RTEFRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERPN-EGVIEFRSYSDLKRAVEK 167
Query: 78 LDRSEF 83
LD +E
Sbjct: 168 LDGTEI 173
>gi|78099805|sp|P26686.4|SRR55_DROME RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName:
Full=52 kDa bracketing protein; AltName: Full=B52
protein; AltName: Full=Protein enhancer of deformed
Length = 376
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDDTEL 181
>gi|453083473|gb|EMF11519.1| hypothetical protein SEPMUDRAFT_150428 [Mycosphaerella populorum
SO2202]
Length = 359
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMK 72
RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G G V+Y + D+
Sbjct: 126 RRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPAGTGKGFVEYETAADLA 185
Query: 73 YAIRKLDRSEFRNAFSRS 90
A+ KLD SEF+ A R
Sbjct: 186 SAVEKLDNSEFKGATVRC 203
>gi|296004548|ref|XP_001351730.2| splicing factor, putative [Plasmodium falciparum 3D7]
gi|225631680|emb|CAD51537.2| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 298
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR Y V VTGLP S SWQDLKDH+R AG+ + VF+D TG V + + DDM AI
Sbjct: 106 SRRGRYVVEVTGLPISGSWQDLKDHLREAGECGHADVFKD---GTGEVSFFNKDDMLEAI 162
Query: 76 RKLDRSEFR 84
K + S FR
Sbjct: 163 DKFNGSIFR 171
>gi|417410943|gb|JAA51935.1| Putative serine/arginine-rich splicing factor 4, partial [Desmodus
rotundus]
Length = 467
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 65 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 123
Query: 78 LDRSEF 83
LD +E
Sbjct: 124 LDGTEV 129
>gi|195144342|ref|XP_002013155.1| GL23543 [Drosophila persimilis]
gi|194102098|gb|EDW24141.1| GL23543 [Drosophila persimilis]
Length = 358
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 111 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 169
Query: 78 LDRSEF 83
LD +E
Sbjct: 170 LDDTEL 175
>gi|7637|emb|CAA44483.1| 52-kD bracketing protein [Drosophila melanogaster]
Length = 376
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDDTEL 181
>gi|367029667|ref|XP_003664117.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
gi|347011387|gb|AEO58872.1| hypothetical protein MYCTH_2306567 [Myceliophthora thermophila ATCC
42464]
Length = 296
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R++G DV +S+ R+ GG G V++ + D++ A+
Sbjct: 96 RRTPHRMQITGLPNDTSWQDLKDFARQSGADVVYSETNRN-GGTEGFVEFETAADLRTAV 154
Query: 76 RKLDRSEFRNA 86
KLD EF+N
Sbjct: 155 EKLDGREFKNV 165
>gi|28571689|ref|NP_788665.1| B52, isoform A [Drosophila melanogaster]
gi|28571699|ref|NP_788666.1| B52, isoform C [Drosophila melanogaster]
gi|386765710|ref|NP_788667.2| B52, isoform N [Drosophila melanogaster]
gi|21064205|gb|AAM29332.1| AT29232p [Drosophila melanogaster]
gi|23171192|gb|AAF54969.2| B52, isoform A [Drosophila melanogaster]
gi|23171193|gb|AAN13575.1| B52, isoform C [Drosophila melanogaster]
gi|25012274|gb|AAN71250.1| LD30815p [Drosophila melanogaster]
gi|27820026|gb|AAO25044.1| GM10155p [Drosophila melanogaster]
gi|220950988|gb|ACL88037.1| B52-PA [synthetic construct]
gi|220957884|gb|ACL91485.1| B52-PA [synthetic construct]
gi|383292690|gb|AAN13576.2| B52, isoform N [Drosophila melanogaster]
Length = 350
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 112 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 170
Query: 78 LDRSEF 83
LD +E
Sbjct: 171 LDDTEL 176
>gi|413948773|gb|AFW81422.1| hypothetical protein ZEAMMB73_489346 [Zea mays]
Length = 446
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 57
V+VTGLPSS SWQDLKDHMRRAGDVCFS V+R+ G
Sbjct: 351 VMVTGLPSSVSWQDLKDHMRRAGDVCFSDVYREVG 385
>gi|47212671|emb|CAF94152.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1550
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 98 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEK 156
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRS 106
LD +E R RRSYSRS
Sbjct: 157 LDGTEVNGRKIRLIEDRPGAKRRRSYSRS 185
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 1270 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEK 1328
Query: 78 LDRSEF 83
LD +E
Sbjct: 1329 LDGTEV 1334
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFLSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF--RNAFSRSYVRVREYDSRRSY 103
LD +E RN +R+ EY R S+
Sbjct: 166 LDGTEINGRN------IRLIEYKPRTSH 187
>gi|198452967|ref|XP_001359013.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
gi|198132156|gb|EAL28156.2| GA10599 [Drosophila pseudoobscura pseudoobscura]
Length = 357
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 111 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 169
Query: 78 LDRSEF 83
LD +E
Sbjct: 170 LDDTEL 175
>gi|225718228|gb|ACO14960.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 355
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MRRAG+V F+ DR G+V++ S DM AI K
Sbjct: 110 RTNYRVIVENLSSRVSWQDLKDVMRRAGEVTFADAHNDRRN-EGVVEFISRRDMDRAIEK 168
Query: 78 LDRSEFR 84
D E +
Sbjct: 169 FDNHELQ 175
>gi|28571691|ref|NP_788668.1| B52, isoform B [Drosophila melanogaster]
gi|7299789|gb|AAF54968.1| B52, isoform B [Drosophila melanogaster]
Length = 329
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDDTEL 181
>gi|194741292|ref|XP_001953123.1| GF17608 [Drosophila ananassae]
gi|190626182|gb|EDV41706.1| GF17608 [Drosophila ananassae]
Length = 350
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 111 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 169
Query: 78 LDRSEF 83
LD +E
Sbjct: 170 LDDTEL 175
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 14/109 (12%)
Query: 3 RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGI 62
RY+ YS+ R+++R++++ + SS WQD+KDHM+RAG V + R G
Sbjct: 103 RYNDYSN-------TRTEHRLVISNISSSCRWQDIKDHMKRAGPVGHVCIKDGR----GY 151
Query: 63 VDYTSYDDMKYAIRKLDRSEFRNAFSRSY-VRVREYDSRRSYSRSPSRS 110
V+Y + DMKYA+ K D SE ++A RSY ++VR D RS+S S RS
Sbjct: 152 VEYINKSDMKYALEKYDGSELQSA-GRSYRIKVR-MDDHRSHSHSNERS 198
>gi|346326093|gb|EGX95689.1| Nucleotide-binding, alpha-beta plait [Cordyceps militaris CM01]
Length = 332
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R+AG DV +S+ RD G G V+Y + +D++ A+
Sbjct: 102 RRTIHRMTITGLPNETSWQDLKDFARQAGPDVVYSETARDSG--RGFVEYENANDLRTAV 159
Query: 76 RKLDRSEFR 84
KLD EF+
Sbjct: 160 EKLDGFEFK 168
>gi|341881506|gb|EGT37441.1| hypothetical protein CAEBREN_07353 [Caenorhabditis brenneri]
Length = 401
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 13 RGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMK 72
+G+ RR+D+RV V G+P + SWQD+KDH+R AG+V F+ + RG GIV++ ++
Sbjct: 106 QGIQRRTDFRVQVRGIPETGSWQDIKDHVRAAGEVVFADI---RGHGIGIVEFEEEGSVR 162
Query: 73 YAIRKLDRSEFRNAFSRSYVRVREYD 98
I +F + + + V+++ D
Sbjct: 163 KCIEMFHNQDFTSHYHET-VKLQMID 187
>gi|347972221|ref|XP_003436860.1| AGAP004592-PE [Anopheles gambiae str. PEST]
gi|333469348|gb|EGK97259.1| AGAP004592-PE [Anopheles gambiae str. PEST]
Length = 351
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 3 RYSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
+Y S S SR G R++YR++V L + SWQDLKD+MR+AG+V ++ + R G
Sbjct: 99 KYKSNSRNSSRYGPPLRTEYRLVVENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKN-EG 157
Query: 62 IVDYTSYDDMKYAIRKLDRSEF 83
+V++ + DMK AI KLD +E
Sbjct: 158 VVEFATLSDMKTAIEKLDDTEL 179
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 9/93 (9%)
Query: 6 SYSSGG--SRGV----SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
+++GG RG + S++R+ V+ LP +ASWQD+KD R AG+V F++VF D
Sbjct: 70 EFANGGRRERGARAFNGQHSEFRLRVSNLPRTASWQDVKDFCREAGEVLFAEVFHD---G 126
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYV 92
TG+V++ DDM++A+R L+ + R+ S +
Sbjct: 127 TGLVEFRREDDMEWALRNLNERKLRSHLGDSDI 159
>gi|195451842|ref|XP_002073099.1| GK13948 [Drosophila willistoni]
gi|194169184|gb|EDW84085.1| GK13948 [Drosophila willistoni]
Length = 362
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 116 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 174
Query: 78 LDRSEF 83
LD +E
Sbjct: 175 LDDTEL 180
>gi|119596372|gb|EAW75966.1| splicing factor, arginine/serine-rich 6, isoform CRA_c [Homo
sapiens]
Length = 383
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 146 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 204
Query: 78 LDRSEF 83
LD +E
Sbjct: 205 LDGTEI 210
>gi|195113427|ref|XP_002001269.1| GI22065 [Drosophila mojavensis]
gi|193917863|gb|EDW16730.1| GI22065 [Drosophila mojavensis]
Length = 361
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 116 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 174
Query: 78 LDRSEF 83
LD +E
Sbjct: 175 LDDTEL 180
>gi|193716028|ref|XP_001949124.1| PREDICTED: serine-arginine protein 55-like isoform 1 [Acyrthosiphon
pisum]
Length = 309
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ + R G+V++ SY D+K A+ K
Sbjct: 117 RTNYRLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKN-EGVVEFASYSDLKTALDK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDDTEL 181
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y+++V L S SWQDLKD+MR+AG+V F+ +R GIV++++Y DM+ A+ K
Sbjct: 110 RTNYQLIVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQ-GIVEFSNYADMRNALNK 168
Query: 78 LDRSEF 83
LD ++
Sbjct: 169 LDNTDL 174
>gi|195390405|ref|XP_002053859.1| GJ24113 [Drosophila virilis]
gi|194151945|gb|EDW67379.1| GJ24113 [Drosophila virilis]
Length = 347
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 111 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 169
Query: 78 LDRSEF 83
LD +E
Sbjct: 170 LDDTEL 175
>gi|429329410|gb|AFZ81169.1| splicing factor 1, putative [Babesia equi]
Length = 207
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
R+ Y V VTGLP + SWQDLKDH+R AG+ + VFR G G V + S DM+YAI
Sbjct: 94 RKGKYLVEVTGLPPTGSWQDLKDHLRAAGECGHANVFR---GGVGEVSFFSRGDMEYAID 150
Query: 77 KLDRSEFR-NAFSRSYVRVREYDSR 100
K D S F+ + ++ + VRE R
Sbjct: 151 KFDGSTFKSHQGEKARITVREKSHR 175
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 4 YSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGI 62
Y SY G S+ G R+++R++V L S SWQDLKD MR+AG+V F R+ G+
Sbjct: 89 YQSYGGGSSQYGPPLRTEHRLIVENLSSRVSWQDLKDFMRKAGEVTFVDAHRNNPN-EGV 147
Query: 63 VDYTSYDDMKYAIRKLDRSEF 83
V++ S DMK A+ KLD SE
Sbjct: 148 VEFASSSDMKSAMDKLDGSEL 168
>gi|344279656|ref|XP_003411603.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Loxodonta
africana]
Length = 423
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK
Sbjct: 182 GPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMKR 240
Query: 74 AIRKLDRSEF 83
A+ KLD +E
Sbjct: 241 ALDKLDGTEI 250
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 3 RYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
R+S YS GS G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 84 RFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRN-E 142
Query: 61 GIVDYTSYDDMKYAIRKLDRSEF 83
G+V++ SY DMK A+ KLD +E
Sbjct: 143 GVVEFASYSDMKSALEKLDGTEL 165
>gi|296412014|ref|XP_002835723.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629512|emb|CAZ79880.1| unnamed protein product [Tuber melanosporum]
Length = 342
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 3 RYSSYSSGGSRGVSR--RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGM 59
R+ + G R R R+ +R+ ++GL SWQDLKD R++G DV FS+V R+R G
Sbjct: 86 RHHDFPGGADRTFPRPRRTAFRMNISGLNPDTSWQDLKDFARKSGSDVVFSEVTRERDGR 145
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEFR 84
G+V++ ++DD++ A+ LDR+EF+
Sbjct: 146 -GMVEFETHDDLRRAVAFLDRTEFK 169
>gi|452989025|gb|EME88780.1| hypothetical protein MYCFIDRAFT_209897, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 209
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMK 72
RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G G V+Y + D+
Sbjct: 111 RRTIHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGFVEYETAADLA 170
Query: 73 YAIRKLDRSEFRNAFSRSY 91
A+ KLD SEF+ + R
Sbjct: 171 SAVEKLDNSEFKGSTVRCI 189
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2 [Takifugu
rubripes]
Length = 374
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 103 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEK 161
Query: 78 LDRSEF 83
LD +E
Sbjct: 162 LDGTEV 167
>gi|328714675|ref|XP_003245425.1| PREDICTED: serine-arginine protein 55-like isoform 2 [Acyrthosiphon
pisum]
Length = 309
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ + R G+V++ SY D+K A+ K
Sbjct: 117 RTNYRLIVENLSSRVSWQDLKDFMRQAGEVTYADAHKQRKN-EGVVEFASYSDLKTALDK 175
Query: 78 LDRSEF 83
LD +E
Sbjct: 176 LDDTEL 181
>gi|170284807|gb|AAI61135.1| Unknown (protein for IMAGE:7797355) [Xenopus (Silurana)
tropicalis]
Length = 428
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR+ V L S SWQDLKD MR+AG+V ++ + R G++++ SY DM+ A+ KLD
Sbjct: 2 YRLRVENLSSRCSWQDLKDFMRQAGEVTYADAHQRRQN-EGVIEFRSYSDMRRALEKLDG 60
Query: 81 SEF 83
SE
Sbjct: 61 SEI 63
>gi|209876590|ref|XP_002139737.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555343|gb|EEA05388.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 377
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R YRV V L +ASW+DLKD+ R+ G+V +S VF +G G+V+Y + ++MK A+ +
Sbjct: 107 RKHYRVCVFNLDENASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEE 166
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYS-------RSP---SRSPYYSRSRSRSP----YY 123
+ F R+ V + D + + RSP S PY R RSR P Y
Sbjct: 167 IPNLPFLGKTIRAEEDVGQLDRELAAANGYGIKRRSPPSYSSGPYGGRPRSRYPSPPRYR 226
Query: 124 SRSRSP 129
RSRSP
Sbjct: 227 QRSRSP 232
>gi|195036928|ref|XP_001989920.1| GH18528 [Drosophila grimshawi]
gi|193894116|gb|EDV92982.1| GH18528 [Drosophila grimshawi]
Length = 360
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 111 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 169
Query: 78 LDRSEF 83
LD +E
Sbjct: 170 LDDTEL 175
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|291409640|ref|XP_002721124.1| PREDICTED: splicing factor SRp55 homolog [Oryctolagus cuniculus]
Length = 284
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 51 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 109
Query: 78 LDRSEF 83
LD +E
Sbjct: 110 LDGTEI 115
>gi|1403024|emb|CAA90876.1| hnRNP protein [Chironomus tentans]
Length = 322
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + + G+V++ + DMK AI K
Sbjct: 113 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHK-QNRNEGVVEFATLKDMKTAIEK 171
Query: 78 LDRSEF 83
LD +E
Sbjct: 172 LDDTEL 177
>gi|76155295|gb|AAX26558.2| SJCHGC09454 protein [Schistosoma japonicum]
Length = 208
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 13 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 71
Query: 78 LDRSEF 83
D E
Sbjct: 72 FDGYEL 77
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y+++V L S SWQDLKD+MR+AG+V F+ +R GIV++++Y DM+ A+ K
Sbjct: 112 RTNYQLVVENLSSHVSWQDLKDYMRQAGEVTFTDAHSNRPNQ-GIVEFSNYADMRNALNK 170
Query: 78 LDRSEF 83
LD ++
Sbjct: 171 LDNTDL 176
>gi|332858668|ref|XP_003317036.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 407
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 170 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 228
Query: 78 LDRSEF 83
LD +E
Sbjct: 229 LDGTEI 234
>gi|347972223|ref|XP_315232.3| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|347972225|ref|XP_003436861.1| AGAP004592-PH [Anopheles gambiae str. PEST]
gi|333469344|gb|EAA10559.4| AGAP004592-PA [Anopheles gambiae str. PEST]
gi|333469351|gb|EGK97262.1| AGAP004592-PH [Anopheles gambiae str. PEST]
Length = 345
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L + SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI K
Sbjct: 109 RTEYRLVVENLSTRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATLSDMKTAIEK 167
Query: 78 LDRSEF 83
LD +E
Sbjct: 168 LDDTEL 173
>gi|89273959|emb|CAJ82241.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 261
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 4 YSSYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGI 62
Y +SGG R G R+++R++V L S SWQDLKD MR+AG+V + R G+
Sbjct: 98 YRQSNSGGPRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGV 156
Query: 63 VDYTSYDDMKYAIRKLDRSEF 83
V++ SY DMK A+ KLD E
Sbjct: 157 VEFASYTDMKNALDKLDGVEL 177
>gi|326931663|ref|XP_003211946.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Meleagris
gallopavo]
Length = 310
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 72 RTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 130
Query: 78 LDRSEF 83
LD +E
Sbjct: 131 LDGTEI 136
>gi|432102741|gb|ELK30220.1| Serine/arginine-rich splicing factor 6 [Myotis davidii]
Length = 306
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 9/88 (10%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 68 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 126
Query: 78 LDRSEF--RNAFSRSYVRVREYDSRRSY 103
LD +E RN +R+ E +R S+
Sbjct: 127 LDGTEINGRN------IRLIEDKARTSH 148
>gi|452839557|gb|EME41496.1| hypothetical protein DOTSEDRAFT_73793 [Dothistroma septosporum
NZE10]
Length = 327
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDR---GGMTGIVDYTSYDDMK 72
RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G G V+Y + D+
Sbjct: 100 RRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVNRERDPSGTGKGYVEYETAADLA 159
Query: 73 YAIRKLDRSEFRNAFSRS 90
A+ KLD SEF+ + R
Sbjct: 160 TAVEKLDNSEFKGSNVRC 177
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 7/88 (7%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G +R++Y+++V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK
Sbjct: 106 GPPQRTEYQLIVENLSSHVSWQDLKDYMRQAGEVTYADAHKIRPN-EGVVEFANYSDMKN 164
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRR 101
AI KLD ++ S R+R Y+ ++
Sbjct: 165 AISKLDNTDL------SGRRIRLYEEKK 186
>gi|170045194|ref|XP_001850202.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
gi|167868189|gb|EDS31572.1| 52K active chromatin boundary protein [Culex quinquefasciatus]
Length = 370
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI K
Sbjct: 115 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATSSDMKTAIEK 173
Query: 78 LDRSEF 83
LD +E
Sbjct: 174 LDDTEL 179
>gi|297259798|ref|XP_001084701.2| PREDICTED: hypothetical protein LOC696054 [Macaca mulatta]
Length = 294
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 58 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 116
Query: 78 LDRSEF 83
LD +E
Sbjct: 117 LDGTEI 122
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 130 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIEK 188
Query: 78 LDRSEF 83
LD +E
Sbjct: 189 LDDTEL 194
>gi|449664983|ref|XP_002156792.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 244
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
+D+R+++ + + SWQD+KD+ R+AG+V F++ R++ G G+V++ S DMK A+RKL
Sbjct: 112 TDFRLVIENVSTRCSWQDIKDYFRQAGEVTFAKCHREKMG-EGVVEFASSSDMKNALRKL 170
Query: 79 DRSEF 83
D SE
Sbjct: 171 DGSEL 175
>gi|345310699|ref|XP_001520239.2| PREDICTED: hypothetical protein LOC100091342 [Ornithorhynchus
anatinus]
Length = 334
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 26 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 84
Query: 78 LDRSEF 83
LD +E
Sbjct: 85 LDGTEI 90
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 104 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTNKGRKN-EGVIEFRQYSDMKRALEK 162
Query: 78 LDRSEF 83
LD +E
Sbjct: 163 LDGTEV 168
>gi|91091338|ref|XP_966697.1| PREDICTED: similar to hnRNP protein [Tribolium castaneum]
Length = 282
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + G+V++ SY D+K AI K
Sbjct: 99 RTNYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFASYSDLKNAIEK 157
Query: 78 LDRSEF 83
LD +E
Sbjct: 158 LDDTEL 163
>gi|346467797|gb|AEO33743.1| hypothetical protein [Amblyomma maculatum]
Length = 239
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y++ V L S SWQDLKD+MR+AG+V ++ R R G+V++ +Y DMK A+ K
Sbjct: 31 RTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRN-EGVVEFATYSDMKNALEK 89
Query: 78 LDRSEF 83
LD ++
Sbjct: 90 LDNTDL 95
>gi|270014159|gb|EFA10607.1| hypothetical protein TcasGA2_TC012868 [Tribolium castaneum]
Length = 424
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + G+V++ SY D+K AI K
Sbjct: 99 RTNYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFASYSDLKNAIEK 157
Query: 78 LDRSEF 83
LD +E
Sbjct: 158 LDDTEL 163
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 105 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 163
Query: 78 LDRSEF 83
LD +E
Sbjct: 164 LDGTEI 169
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 103 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 161
Query: 78 LDRSEF 83
LD +E
Sbjct: 162 LDGTEI 167
>gi|332024474|gb|EGI64672.1| Serine-arginine protein 55 [Acromyrmex echinatior]
Length = 367
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 164 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 222
Query: 78 LDRSEF 83
LD +E
Sbjct: 223 LDDTEL 228
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 101 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|406862976|gb|EKD16025.1| pre-mRNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 326
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G V++ + D+K A+
Sbjct: 118 RRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETALDLKTAV 177
Query: 76 RKLDRSEFRNAFSRSYVRVREY-DSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
KLD EF+ VRV D++ R R RSRSP R+
Sbjct: 178 EKLDGREFKG------VRVTCIADTQPDIPR--------DRGRSRSPIPRRAHLVDDYDR 223
Query: 135 YSPRSRSYSP-RGKYSRRSP 153
P SR YSP R Y RSP
Sbjct: 224 RGPPSRGYSPRRDTYRERSP 243
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus norvegicus]
Length = 339
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|289740685|gb|ADD19090.1| serine-arginine protein 55 [Glossina morsitans morsitans]
Length = 351
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 117 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 175
Query: 78 LDRSEF 83
LD ++
Sbjct: 176 LDDTDL 181
>gi|289739639|gb|ADD18567.1| arginine/serine-rich 6 splicing factor [Glossina morsitans
morsitans]
Length = 346
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G+V++ S DMK AI K
Sbjct: 116 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEK 174
Query: 78 LDRSEF 83
LD ++
Sbjct: 175 LDDTDL 180
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 184 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 242
Query: 78 LDRSEF 83
LD +E
Sbjct: 243 LDDTEL 248
>gi|119628062|gb|EAX07657.1| splicing factor, arginine/serine-rich 4, isoform CRA_a [Homo
sapiens]
Length = 484
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 65 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 124
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 125 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 155
>gi|71028610|ref|XP_763948.1| splicing factor [Theileria parva strain Muguga]
gi|68350902|gb|EAN31665.1| splicing factor, putative [Theileria parva]
Length = 257
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
Y + VTGLP S SWQDLKDHMR AG+ + VFR G G + + S DM YAI + D
Sbjct: 103 YVLEVTGLPPSGSWQDLKDHMRDAGECGHADVFR---GGVGEITFFSRSDMDYAIERFDG 159
Query: 81 SEFR 84
S FR
Sbjct: 160 STFR 163
>gi|346466769|gb|AEO33229.1| hypothetical protein [Amblyomma maculatum]
Length = 289
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y++ V L S SWQDLKD+MR+AG+V ++ R R G+V++ +Y DMK A+ K
Sbjct: 47 RTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRN-EGVVEFATYSDMKNALEK 105
Query: 78 LDRSEF 83
LD ++
Sbjct: 106 LDNTDL 111
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 141 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 199
Query: 78 LDRSEF 83
LD +E
Sbjct: 200 LDGTEI 205
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 113 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEK 171
Query: 78 LDRSEF 83
LD +E
Sbjct: 172 LDGTEV 177
>gi|363742346|ref|XP_417747.3| PREDICTED: serine/arginine-rich splicing factor 4 [Gallus gallus]
Length = 214
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + R G++++ SY DMK A+ K
Sbjct: 58 RTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKN-EGVIEFKSYSDMKRALEK 116
Query: 78 LDRSEF 83
LD +E
Sbjct: 117 LDGTEV 122
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR Y V V GLP S SWQDLKDHMR AG+ + VFR G G V + S DM AI
Sbjct: 95 RRGHYTVEVLGLPPSGSWQDLKDHMRDAGECGHADVFR---GGVGEVSFFSRRDMDAAIE 151
Query: 77 KLDRSEFR-NAFSRSYVRVRE 96
D S FR + ++ + VRE
Sbjct: 152 MFDGSTFRSHEGEKAKITVRE 172
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 184 RTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 242
Query: 78 LDRSEF 83
LD +E
Sbjct: 243 LDDTEL 248
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|281345554|gb|EFB21138.1| hypothetical protein PANDA_005614 [Ailuropoda melanoleuca]
Length = 319
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 82 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 140
Query: 78 LDRSEF 83
LD +E
Sbjct: 141 LDGTEI 146
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|301763950|ref|XP_002917433.1| PREDICTED: hypothetical protein LOC100470426 [Ailuropoda
melanoleuca]
Length = 306
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 69 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 127
Query: 78 LDRSEF 83
LD +E
Sbjct: 128 LDGTEI 133
>gi|410953846|ref|XP_003983581.1| PREDICTED: serine/arginine-rich splicing factor 6 [Felis catus]
Length = 318
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 81 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 139
Query: 78 LDRSEF 83
LD +E
Sbjct: 140 LDGTEI 145
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2 [Oreochromis
niloticus]
Length = 386
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 96 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRLYSDMKRALEK 154
Query: 78 LDRSEF 83
LD +E
Sbjct: 155 LDGTEV 160
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+R++Y+++V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK AI
Sbjct: 109 QRTEYQLIVENLSSHVSWQDLKDYMRQAGEVTYADAHKIRPN-EGVVEFANYSDMKNAIS 167
Query: 77 KLDRSEFRNAFSRSYVRVREYDSRR 101
KLD ++ S R+R Y+ ++
Sbjct: 168 KLDNTDL------SGRRIRLYEEKK 186
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1 [Oreochromis
niloticus]
Length = 390
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 100 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRLYSDMKRALEK 158
Query: 78 LDRSEF 83
LD +E
Sbjct: 159 LDGTEV 164
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 75 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 134
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 135 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ +Y DMK A+ K
Sbjct: 109 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRTYSDMKRALDK 167
Query: 78 LDRSEF 83
LD ++
Sbjct: 168 LDGTDI 173
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 184 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 242
Query: 78 LDRSEF 83
LD +E
Sbjct: 243 LDDTEL 248
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Monodelphis
domestica]
Length = 340
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|47087341|ref|NP_998631.1| serine/arginine-rich splicing factor 6a [Danio rerio]
gi|32822789|gb|AAH55238.1| Splicing factor, arginine/serine-rich 6a [Danio rerio]
Length = 347
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DM+ A+ K
Sbjct: 79 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERAN-EGVIEFRSYSDMRRALEK 137
Query: 78 LDRSEF 83
LD ++
Sbjct: 138 LDGTDI 143
>gi|346977018|gb|EGY20470.1| pre-mRNA splicing factor [Verticillium dahliae VdLs.17]
Length = 322
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+
Sbjct: 106 RRTQHRMQITGLPTDTSWQDLKDFARQSSLDVVYSETGRD-GNGRGFVEFETAADLRTAV 164
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + P P +R RSRSP R P Y
Sbjct: 165 EKLDGREFKGKPVNCVADTQ-----------PDIPPRDNRGRSRSPNGRRPPPPPPVDDY 213
Query: 136 SPRS--RSYSPRG---KYSRRSP 153
R R YSPRG Y RSP
Sbjct: 214 DRRGPPRGYSPRGYRDGYRDRSP 236
>gi|432882993|ref|XP_004074180.1| PREDICTED: uncharacterized protein LOC101163182 isoform 4 [Oryzias
latipes]
Length = 344
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 77 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEK 135
Query: 78 LDRSEF 83
LD +E
Sbjct: 136 LDGTEV 141
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1 [Oryzias
latipes]
Length = 372
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 101 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|213401865|ref|XP_002171705.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
gi|211999752|gb|EEB05412.1| pre-mRNA-splicing factor srp2 [Schizosaccharomyces japonicus
yFS275]
Length = 375
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR+ YR++V L SWQDLKD MR+AG+ F+ R++ G TG+V++++ DDMK+A+
Sbjct: 91 RRTGYRLIVENLAEDVSWQDLKDVMRKAGEPTFTDAHREQRG-TGVVEFSTEDDMKHALD 149
Query: 77 KLD 79
L+
Sbjct: 150 TLN 152
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like [Taeniopygia
guttata]
Length = 277
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 3 RYSSYS--SGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM 59
R+S Y SG SR G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 84 RFSYYQSTSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRN- 142
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEF 83
G+V++ SY DMK A+ KLD +E
Sbjct: 143 EGVVEFASYSDMKSALEKLDGTEL 166
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 75 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 134
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 135 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 69 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 128
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 129 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 159
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 75 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 134
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 135 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 184 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 242
Query: 78 LDRSEF 83
LD +E
Sbjct: 243 LDDTEL 248
>gi|338719068|ref|XP_001500385.3| PREDICTED: serine/arginine-rich splicing factor 6 [Equus
caballus]
Length = 164
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 24 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 82
Query: 78 LDRSEF 83
LD +E
Sbjct: 83 LDGTEI 88
>gi|336465804|gb|EGO53969.1| hypothetical protein NEUTE1DRAFT_118022 [Neurospora tetrasperma
FGSC 2508]
gi|350287365|gb|EGZ68612.1| hypothetical protein NEUTE2DRAFT_146011 [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R++ G G V++ + D++ A+
Sbjct: 100 RRTPHRMQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAV 158
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY---YSRSRSPSRS 132
KLD EF+ + V + D R+ R+ SRSP R R P Y R P R
Sbjct: 159 EKLDNREFKGQ-RVTCVANTQPDIPRNDHRARSRSP---RGRPYPPPMDDYDRRGPPPR- 213
Query: 133 WSYSPRSRSYSPRGKYSRRSP 153
YSPR Y R Y RSP
Sbjct: 214 -GYSPRRDGY--RDGYRDRSP 231
>gi|426241491|ref|XP_004014624.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Ovis
aries]
Length = 344
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 106 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 164
Query: 78 LDRSEF 83
LD +E
Sbjct: 165 LDGTEI 170
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 75 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 134
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 135 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|226467221|emb|CAX76091.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 108 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 166
Query: 78 LDRSEF 83
D E
Sbjct: 167 FDGYEL 172
>gi|426241493|ref|XP_004014625.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2 [Ovis
aries]
Length = 339
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 101 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEI 165
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 75 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 134
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 135 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|226467219|emb|CAX76090.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 108 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 166
Query: 78 LDRSEF 83
D E
Sbjct: 167 FDGYEL 172
>gi|89267363|emb|CAJ82789.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V + R G+V++ SY DMK A+ K
Sbjct: 86 RTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGVVEFASYTDMKNALDK 144
Query: 78 LDRSEF 83
LD E
Sbjct: 145 LDGVEL 150
>gi|336266018|ref|XP_003347779.1| hypothetical protein SMAC_03877 [Sordaria macrospora k-hell]
gi|380091314|emb|CCC11171.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R++ G G V++ + D++ A+
Sbjct: 100 RRTPHRMQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAV 158
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY---YSRSRSPSRS 132
KLD EF+ + V + D R+ R+ SRSP R R P Y R P R
Sbjct: 159 EKLDNREFKGQ-RVTCVANTQPDIPRNDHRARSRSP---RGRPYPPPVDDYDRRGPPPR- 213
Query: 133 WSYSPRSRSYSPRGKYSRRSP 153
YSPR Y R Y RSP
Sbjct: 214 -GYSPRRDGY--RDGYRDRSP 231
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 184 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 242
Query: 78 LDRSEF 83
LD +E
Sbjct: 243 LDDTEL 248
>gi|226467223|emb|CAX76092.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 108 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 166
Query: 78 LDRSEF 83
D E
Sbjct: 167 FDGYEL 172
>gi|427777529|gb|JAA54216.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 308
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y++LV L +S SWQDLKD MR+AGDV ++ + R G+V++ SY DMK A+R
Sbjct: 93 RTNYQLLVENLSTSVSWQDLKDFMRQAGDVTYTDAHKLR-RHQGVVEFASYSDMKNALRS 151
Query: 78 LD 79
LD
Sbjct: 152 LD 153
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
S YR+ L + SWQDLKD R+AG V ++ VF +RG G+++Y + +DM+ A+ KL
Sbjct: 85 SGYRIYAENLSQNTSWQDLKDFARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKL 144
Query: 79 DRSEFRNAFSRSYVRV 94
D +E RS VR+
Sbjct: 145 DGTELH----RSKVRL 156
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + G+V++ SY D+K AI K
Sbjct: 112 RTDYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFASYSDLKTAIEK 170
Query: 78 LDRSEF 83
LD ++
Sbjct: 171 LDGTDL 176
>gi|398406965|ref|XP_003854948.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
gi|339474832|gb|EGP89924.1| hypothetical protein MYCGRDRAFT_99129 [Zymoseptoria tritici IPO323]
Length = 333
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRG----GMTGIVDYTSYDDM 71
RR+ +R+ +TGLP SWQDLKD R++G DV +S+V R+R G V+Y + D+
Sbjct: 98 RRTVHRMTITGLPFETSWQDLKDFARQSGLDVVYSEVGRERDSSGTGKGSFVEYETAADL 157
Query: 72 KYAIRKLDRSEFRNAFSRS 90
A+ KLD +EF+ A R
Sbjct: 158 AAAVEKLDNNEFKGATVRC 176
>gi|85096852|ref|XP_960334.1| hypothetical protein NCU07069 [Neurospora crassa OR74A]
gi|28921822|gb|EAA31098.1| predicted protein [Neurospora crassa OR74A]
Length = 313
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R++ G G V++ + D++ A+
Sbjct: 98 RRTPHRMQISGLPNETSWQDLKDFARQSGLDVVYSETTRNQNG-EGFVEFENAADLRTAV 156
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY---YSRSRSPSRS 132
KLD EF+ + V + D R+ R+ SRSP R R P Y R P R
Sbjct: 157 EKLDNREFKGQ-RVTCVANTQPDIPRNDHRARSRSP---RGRPYPPPIDDYDRRGPPPR- 211
Query: 133 WSYSPRSRSYSPRGKYSRRSP 153
YSPR Y R Y RSP
Sbjct: 212 -GYSPRRDGY--RDGYRDRSP 229
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1 [Canis
lupus familiaris]
Length = 344
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 75 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 134
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 135 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 165
>gi|256077394|ref|XP_002574990.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229592|emb|CCD75763.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 371
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 105 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 163
Query: 78 LDRSEF 83
D E
Sbjct: 164 FDGYEL 169
>gi|256077392|ref|XP_002574989.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229591|emb|CCD75762.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 370
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 104 RTEYRVIVENLSSRVSWQDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 162
Query: 78 LDRSEF 83
D E
Sbjct: 163 FDGYEL 168
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V F R G+V++ S+ DMK AI K
Sbjct: 125 RTEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKN-EGVVEFASHSDMKNAIDK 183
Query: 78 LDRSEF 83
LD ++
Sbjct: 184 LDGTDL 189
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3 [Oryzias
latipes]
Length = 388
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 101 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRRN-EGVIEFRQYSDMKRALEK 159
Query: 78 LDRSEF 83
LD +E
Sbjct: 160 LDGTEV 165
>gi|116202487|ref|XP_001227055.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
gi|88177646|gb|EAQ85114.1| hypothetical protein CHGG_09128 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP+ SWQDLKD R++G DV +S+ R+ G G V++ + D++ A+
Sbjct: 105 RRTPHRMQISGLPNDTSWQDLKDFARQSGLDVVYSETNRN-GSNEGFVEFETAADLRSAV 163
Query: 76 RKLDRSEFRNA 86
KLD EF+NA
Sbjct: 164 EKLDNREFKNA 174
>gi|242012605|ref|XP_002427020.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511265|gb|EEB14282.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 403
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ ++R GIV+++S D+K AI K
Sbjct: 185 RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRN-EGIVEFSSSSDLKAAIDK 243
Query: 78 LDRSEF 83
LD +E
Sbjct: 244 LDGTEL 249
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 108 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 166
Query: 78 LDRSEF 83
LD +E
Sbjct: 167 LDGTEI 172
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 110 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 168
Query: 78 LDRSEF 83
LD +E
Sbjct: 169 LDGTEI 174
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|443724659|gb|ELU12563.1| hypothetical protein CAPTEDRAFT_175470 [Capitella teleta]
Length = 321
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + GIV+++S DMK A+ K
Sbjct: 115 RTEYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKQHKN-EGIVEFSSRADMKTALEK 173
Query: 78 LDRSEF 83
LD +E
Sbjct: 174 LDDTEI 179
>gi|54020785|ref|NP_001005638.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
gi|49250524|gb|AAH74634.1| keratin 5, gene 1 [Xenopus (Silurana) tropicalis]
Length = 262
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V + R G+V++ SY DMK A+ K
Sbjct: 114 RTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGVVEFASYTDMKNALDK 172
Query: 78 LDRSEF 83
LD E
Sbjct: 173 LDGVEL 178
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y++ V L S SWQDLKD+MR+AG+V ++ R R G+V++ +Y DMK A+ K
Sbjct: 100 RTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHRLRRN-EGVVEFATYSDMKNALEK 158
Query: 78 LDRSEF 83
LD ++
Sbjct: 159 LDNTDL 164
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2 [Oryzias
latipes]
Length = 373
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 117 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDK 175
Query: 78 LDRSEF 83
LD ++
Sbjct: 176 LDGTDI 181
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1 [Oryzias
latipes]
Length = 367
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 111 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNQ-GVIEFRSYSDMKRALDK 169
Query: 78 LDRSEF 83
LD ++
Sbjct: 170 LDGTDI 175
>gi|355721871|gb|AES07404.1| splicing factor SRp55-1 [Mustela putorius furo]
Length = 250
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 71 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 129
Query: 78 LDRSEF 83
LD +E
Sbjct: 130 LDGTEI 135
>gi|389584162|dbj|GAB66895.1| splicing factor arginine/serine-rich 1 [Plasmodium cynomolgi strain
B]
Length = 316
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ G+ G V + +DM AI
Sbjct: 105 SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN--GL-GEVSFFHKEDMLEAI 161
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
K + S FR + +S + +RE
Sbjct: 162 EKFNGSTFRSHEGEKSKITIRE 183
>gi|241159531|ref|XP_002408582.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
gi|215494365|gb|EEC04006.1| alternative splicing factor ASF/SF2, putative [Ixodes scapularis]
Length = 339
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y++LV L SS SWQDLKD MR+AG+V ++ + R G+V++ +Y DMK A+ K
Sbjct: 96 RTEYQLLVENLSSSVSWQDLKDFMRQAGEVTYTDAHKLRRN-EGVVEFATYSDMKNALIK 154
Query: 78 LDRSEF 83
L+ +
Sbjct: 155 LNHMDL 160
>gi|290562251|gb|ADD38522.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 331
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L + SWQDLKD MRRAG+V F+ D+ G+V++ S DM+ AI K
Sbjct: 118 RTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRN-EGVVEFISRRDMERAIDK 176
Query: 78 LDRSEF 83
D E
Sbjct: 177 FDNHEL 182
>gi|225712276|gb|ACO11984.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 329
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L + SWQDLKD MRRAG+V F+ D+ G+V++ S DM+ AI K
Sbjct: 116 RTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRN-EGVVEFISRRDMERAIDK 174
Query: 78 LDRSEF 83
D E
Sbjct: 175 FDNHEL 180
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ +
Sbjct: 107 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDR 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|322694046|gb|EFY85887.1| pre-mRNA splicing factor [Metarhizium acridum CQMa 102]
Length = 314
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 69/144 (47%), Gaps = 24/144 (16%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP+ SWQDLKD R+ G DV +S+ RD G G V+Y + D++ A+ KLD
Sbjct: 103 MQITGLPNETSWQDLKDFARQPGLDVVYSETGRDSNGR-GFVEYETAADLRTAVDKLDGR 161
Query: 82 EFRNAFSRSYV-------------RVREYDSRRSYSRSPSRSPYYSR--------SRSRS 120
EF+ + R R RR Y+ P+R Y R +R
Sbjct: 162 EFKGNRVQCIADTQPDMPPRDGRGRSRSPGGRRPYNNMPTRFDEYDRRGPPPRGYNRDPG 221
Query: 121 PYYSRSRSPSRSWSYSPRSRSYSP 144
PY R RSP R + Y R+R SP
Sbjct: 222 PYGYRDRSPRREY-YEDRARYRSP 244
>gi|357621499|gb|EHJ73311.1| splicing factor arginine/serine-rich 6 [Danaus plexippus]
Length = 408
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD+MR+AG+V ++ + G+V++ ++ DM+ AI K
Sbjct: 109 RTEYRLIVENLSSRISWQDLKDYMRQAGEVTYADAHKQHRN-EGVVEFATHSDMRAAIEK 167
Query: 78 LDRSEF 83
LD +E
Sbjct: 168 LDGTEL 173
>gi|322792693|gb|EFZ16561.1| hypothetical protein SINV_05882 [Solenopsis invicta]
Length = 386
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y D+K AI K
Sbjct: 152 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRN-EGVVEFATYSDLKNAIDK 210
Query: 78 LDRSEF 83
LD +E
Sbjct: 211 LDDTEL 216
>gi|157133042|ref|XP_001662753.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108870967|gb|EAT35192.1| AAEL012621-PA [Aedes aegypti]
Length = 342
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+MR+AG+V ++ + R G+V++ + DMK AI K
Sbjct: 119 RTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRKN-EGVVEFATSSDMKTAIDK 177
Query: 78 LDRSEF 83
LD +E
Sbjct: 178 LDDTEL 183
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
R + YRV ++GLP++ SWQDLKD +R+ GDV S V DR G G + + D+M+ AIR
Sbjct: 85 RGTQYRVKISGLPATMSWQDLKDFLRKGGDVVHSDV--DRRG-NGTASFATSDEMRRAIR 141
Query: 77 KLDRSEFRNAFSRSYVRVREYDS 99
+LD ++ VRVRE D+
Sbjct: 142 QLDGTDLDG----ERVRVREEDA 160
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+ G+V F R G+V++ S+ DMK A+ K
Sbjct: 121 RTEHRIIVENLSSRISWQDLKDLMRKVGEVTFVDAHRTNKN-EGVVEFASHSDMKNALDK 179
Query: 78 LDRSEF 83
LD ++
Sbjct: 180 LDGTDL 185
>gi|154304025|ref|XP_001552418.1| pre-mRNA splicing factor [Botryotinia fuckeliana B05.10]
Length = 308
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G V++ + D+K A+
Sbjct: 98 RRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAV 157
Query: 76 RKLDRSEFRNA 86
KLD EF+ A
Sbjct: 158 EKLDGREFKGA 168
>gi|347441498|emb|CCD34419.1| hypothetical protein [Botryotinia fuckeliana]
Length = 324
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G V++ + D+K A+
Sbjct: 98 RRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAV 157
Query: 76 RKLDRSEFRNA 86
KLD EF+ A
Sbjct: 158 EKLDGREFKGA 168
>gi|342326382|gb|AEL23106.1| hnRNP protein [Cherax quadricarinatus]
Length = 284
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G++ R+DYR+ V L S SWQDLKD MR+AG+V ++ + R G+V++ +Y DMK
Sbjct: 89 GMAARTDYRLTVEDLSSRVSWQDLKDFMRQAGEVTYADAHKYRRN-EGVVEFATYADMKN 147
Query: 74 AIRKLDRSEF 83
A+ +LD E
Sbjct: 148 AMHRLDGKEL 157
>gi|156030683|ref|XP_001584668.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980]
gi|154700828|gb|EDO00567.1| hypothetical protein SS1G_14437 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 307
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R++ DV +S+ RDR G V++ + D+K A+
Sbjct: 97 RRTPHRMQISGLPGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLKTAV 156
Query: 76 RKLDRSEFRNA 86
KLD EF+ A
Sbjct: 157 EKLDGREFKGA 167
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu rubripes]
Length = 379
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ S+ DMK A+ K
Sbjct: 102 RTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSHSDMKRALDK 160
Query: 78 LDRSEF 83
LD ++
Sbjct: 161 LDGTDI 166
>gi|221130958|ref|XP_002164143.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Hydra magnipapillata]
Length = 264
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
DR + + RG +++R++VT L S W DLKD+ R AG+V F++ ++R G G
Sbjct: 94 DRRKGHENDRGRGRPYNTEWRLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-EG 152
Query: 62 IVDYTSYDDMKYAIRKLDRSEF 83
+V++ SY +MK A++K D SEF
Sbjct: 153 VVEFRSYREMKRALKKFDGSEF 174
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus rotundus]
Length = 345
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V ++ ++R G++++ SY DMK A+ K
Sbjct: 107 RTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEI 171
>gi|241574282|ref|XP_002403075.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502148|gb|EEC11642.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 364
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G R++Y++ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK
Sbjct: 96 GPPTRTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKLRRN-EGVVEFATYSDMKN 154
Query: 74 AIRKLDRSEF 83
A+ KLD ++
Sbjct: 155 ALDKLDNTDL 164
>gi|226288775|gb|EEH44287.1| hypothetical protein PADG_00576 [Paracoccidioides brasiliensis
Pb18]
Length = 303
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 32/148 (21%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 98 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
KLD EF+ + ++ + R+ R PY RSRSP R Y
Sbjct: 154 EKLDGREFKGSRVLCTQDIQSQEDRQ------PREPY------------RSRSPGRRGGY 195
Query: 136 SPRS---------RSYSPRGKYSRRSPS 154
P R YSPR Y RSP+
Sbjct: 196 HPYEEYDRRGAPPRGYSPRNHYRERSPA 223
>gi|148238297|ref|NP_001085381.1| serine/arginine-rich splicing factor 4 [Xenopus laevis]
gi|49257226|gb|AAH71160.1| MGC83263 protein [Xenopus laevis]
Length = 259
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 6 SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVD 64
S S G SR G R+++R++V L S SWQDLKD MR+AG+V + R G+V+
Sbjct: 98 SNSGGPSRYGPPVRTEHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRSNRN-EGVVE 156
Query: 65 YTSYDDMKYAIRKLDRSEF 83
+ SY DMK A+ KLD E
Sbjct: 157 FASYSDMKSALDKLDGVEL 175
>gi|410911522|ref|XP_003969239.1| PREDICTED: uncharacterized protein LOC101080136 isoform 1 [Takifugu
rubripes]
Length = 374
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+DYR++V L S SWQDLKD+MR+AG+V ++ + R G++++ Y DMK A+ K
Sbjct: 98 RTDYRLIVENLSSRCSWQDLKDYMRQAGEVTYADTHKGRKN-EGVIEFRQYSDMKRALEK 156
Query: 78 LDRSEFRNAFSRSYVRVRE 96
LD +E +R+ E
Sbjct: 157 LDGTEVNG----RKIRLIE 171
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+RVLVTG+ SWQDLKD R AG V F+ + RD G G+++Y S DD +A+R LDR
Sbjct: 103 FRVLVTGVSRDTSWQDLKDFGREAGSVTFADIDRDVPGQ-GVLEYMSRDDADHAVRYLDR 161
Query: 81 SEFR 84
+ R
Sbjct: 162 RDLR 165
>gi|426222714|ref|XP_004005530.1| PREDICTED: uncharacterized protein LOC101109078 [Ovis aries]
Length = 437
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 3 RYSSYSSGGSR-----------GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQ 51
R SY SG S G R++YR++V L S SWQDLKD+MR+AG+V ++
Sbjct: 61 RDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYAD 120
Query: 52 VFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ R G++++ SY DMK A+ KLD +E
Sbjct: 121 AHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 151
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y++ V L S SWQDLKD+MR+AG+V ++ + R G+V++ +Y DMK A+ K
Sbjct: 100 RTEYQLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKLRRN-EGVVEFATYSDMKNALDK 158
Query: 78 LDRSEF 83
LD ++
Sbjct: 159 LDNTDL 164
>gi|291224547|ref|XP_002732263.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 261
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+D R++V L S SWQDLKD+MR+AG+V ++ ++ G+V++ +Y DMK A+ K
Sbjct: 119 RTDNRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKEHKN-EGVVEFATYSDMKNAMSK 177
Query: 78 LDRSEF 83
LD +E
Sbjct: 178 LDGTEI 183
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ TG V + +DM AI
Sbjct: 104 SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN---GTGEVSFFHKEDMLEAI 160
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
K + S FR + ++ + +R+
Sbjct: 161 EKFNGSTFRSHEGEKAKITIRQ 182
>gi|156358473|ref|XP_001624543.1| predicted protein [Nematostella vectensis]
gi|156211330|gb|EDO32443.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R+ V L S ++WQDLK++M + G+V F+ + R G G+V++ + DDMK A++K
Sbjct: 104 RTEHRLAVENLSSRSNWQDLKEYMGKVGEVTFADAHKRRQG-EGVVEFATKDDMKTALKK 162
Query: 78 LDRSEF 83
LD +EF
Sbjct: 163 LDDTEF 168
>gi|226467225|emb|CAX76093.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 372
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQ+LKD MR+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 108 RTEYRVIVENLSSRVSWQELKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 166
Query: 78 LDRSEF 83
D E
Sbjct: 167 FDGYEL 172
>gi|355778262|gb|EHH63298.1| Adapter-related protein complex 3 subunit beta-2 [Macaca
fascicularis]
Length = 1156
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 33 SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSR-SY 91
SWQDLKDHMR DVC++ V +D GM V+Y DM+YA+RKLD +F + S SY
Sbjct: 87 SWQDLKDHMRAVWDVCYAHVQKDGVGM---VEYLRKADMEYALRKLDDIKFCSHDSETSY 143
Query: 92 VRVREYDSRRS 102
+RV Y RR+
Sbjct: 144 IRV--YPERRT 152
>gi|403166701|ref|XP_003326577.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166678|gb|EFP82158.2| hypothetical protein PGTG_07555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 258
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR +R+LV GL SWQDLKD R+AG+V + V R+ G G++++ S DD AIR
Sbjct: 90 RRGGFRLLVKGLSHETSWQDLKDFARQAGNVTRADVDRNMPG-EGLIEFASQDDADNAIR 148
Query: 77 KLDRSEFR 84
KLD +E +
Sbjct: 149 KLDGTELK 156
>gi|156095500|ref|XP_001613785.1| splicing factor, arginine/serine-rich 1 [Plasmodium vivax Sal-1]
gi|148802659|gb|EDL44058.1| splicing factor, arginine/serine-rich 1, putative [Plasmodium
vivax]
Length = 314
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ G+ G V + +DM AI
Sbjct: 105 SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN--GL-GEVSFFHKEDMLEAI 161
Query: 76 RKLDRSEFR-NAFSRSYVRVRE 96
K + S FR + +S + +R+
Sbjct: 162 EKFNGSTFRSHEGEKSKITIRQ 183
>gi|221485545|gb|EEE23826.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 351
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 13 RGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSY 68
RG++ RR + + V GLP S SWQDLKDH R GDV F++V +D + G V + S
Sbjct: 109 RGLAGRRGRFVLEVRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSK 168
Query: 69 DDMKYAIRKLDRSEFR-NAFSRSYVRVRE 96
DM AI LD S FR + +S + VRE
Sbjct: 169 RDMMEAIEVLDGSTFRSHEGEKSRISVRE 197
>gi|237844047|ref|XP_002371321.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211968985|gb|EEB04181.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|221506395|gb|EEE32030.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 351
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 13 RGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSY 68
RG++ RR + + V GLP S SWQDLKDH R GDV F++V +D + G V + S
Sbjct: 109 RGLAGRRGRFVLEVRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSK 168
Query: 69 DDMKYAIRKLDRSEFR-NAFSRSYVRVRE 96
DM AI LD S FR + +S + VRE
Sbjct: 169 RDMMEAIEVLDGSTFRSHEGEKSRISVRE 197
>gi|298707357|emb|CBJ30001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 405
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 13/95 (13%)
Query: 2 DRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTG 61
DRYS RR+DYRV ++GLPS SWQD+K R+ + + Q++ +G G
Sbjct: 131 DRYSQKKG------PRRTDYRVNLSGLPSGTSWQDIKSLFRKYAEPGYVQIYT-KG--EG 181
Query: 62 IVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVRVRE 96
+V++ S D+M++ IRKLD ++ F Y+R+ E
Sbjct: 182 LVEFNSLDEMEHVIRKLDNTK----FDGEYIRLIE 212
>gi|121705498|ref|XP_001271012.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
gi|119399158|gb|EAW09586.1| pre-RNA splicing factor Srp2, putative [Aspergillus clavatus NRRL
1]
Length = 296
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 22/150 (14%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+L++GLP + SWQDLKD R++G DV +S+ R+ G G V++ + D+K A+
Sbjct: 97 RRTVFRMLISGLPET-SWQDLKDFARQSGLDVVYSETGREPG--RGFVEFETAADLKTAV 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRS----YSRSPSRS--PY------YSRSRSRSPYY 123
KLD +F+ + ++ +D R SRSP RS P + R SP +
Sbjct: 154 DKLDGRDFKGSRVSCIADIQSHDDRALRDPYRSRSPRRSYPPMEEYDRRFPAPRGYSPRH 213
Query: 124 SRSRSPSRSWSYSPRSRSYSPRGKYSRRSP 153
R RSP P R Y R Y RRSP
Sbjct: 214 YRERSP------VPVRREYYERDGYGRRSP 237
>gi|239606902|gb|EEQ83889.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis ER-3]
gi|327351368|gb|EGE80225.1| RNA recognition domain-containing protein containing protein
[Ajellomyces dermatitidis ATCC 18188]
Length = 299
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 98 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPYYSRSRSPSR 131
KLD EF+ + ++ + R+ SR PY SRS R PY R +
Sbjct: 154 EKLDGREFKGSRVLCTQDIQSLEDRQ------SRDPYRSRSPGRRGGYHPYDDYDRRGAP 207
Query: 132 SWSYSPRS---------RSYSPRGKYSRRSP 153
YSPR+ R Y R Y RR+P
Sbjct: 208 RGGYSPRNHYRERSPGRRDYYDRDGYGRRTP 238
>gi|451996756|gb|EMD89222.1| hypothetical protein COCHEDRAFT_1158038 [Cochliobolus
heterostrophus C5]
Length = 338
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 25 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ LP SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF
Sbjct: 104 IANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKTAVEKLDRREF 162
Query: 84 R 84
+
Sbjct: 163 K 163
>gi|330941512|ref|XP_003306066.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
gi|311316625|gb|EFQ85835.1| hypothetical protein PTT_19086 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 25 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ LP SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF
Sbjct: 106 IANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKAAVEKLDRREF 164
Query: 84 RN 85
+
Sbjct: 165 KG 166
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD+MR+AG+V F+ + G+V+ S+ D+K I K
Sbjct: 143 RTEHRLIVENLSSRCSWQDLKDYMRQAGEVTFADAHKQHKN-EGVVELASHSDLKNVIAK 201
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSP 107
LD +E S +++ E +R SRSP
Sbjct: 202 LDGTE----ISGRKIKLIEDRPKRHRSRSP 227
>gi|348515955|ref|XP_003445505.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oreochromis niloticus]
Length = 258
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+D+R++V L S SWQDLKD MR+AG+V F R G+V++ S DMK AI K
Sbjct: 79 RTDHRLVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDMKNAISK 137
Query: 78 LDRSEF 83
LD +E
Sbjct: 138 LDGTEL 143
>gi|401412768|ref|XP_003885831.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
gi|325120251|emb|CBZ55805.1| Function: human SRp75 can complement a splicing-deficient extract,
related [Neospora caninum Liverpool]
Length = 353
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 13 RGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSY 68
RG++ RR + + V GLP S SWQDLKDH R GDV F++V +D + G V + S
Sbjct: 109 RGLAGRRGRFVLEVRGLPPSGSWQDLKDHFRGIGDVGFAEVRKDPDAPDSVMGKVSFFSK 168
Query: 69 DDMKYAIRKLDRSEFR-NAFSRSYVRVRE 96
DM AI LD S FR + +S + VRE
Sbjct: 169 RDMMEAIEALDGSTFRSHEGEKSRITVRE 197
>gi|451847680|gb|EMD60987.1| hypothetical protein COCSADRAFT_163394 [Cochliobolus sativus
ND90Pr]
Length = 340
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 25 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ LP SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF
Sbjct: 106 IANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKTAVEKLDRREF 164
Query: 84 R 84
+
Sbjct: 165 K 165
>gi|348515953|ref|XP_003445504.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oreochromis niloticus]
Length = 295
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+D+R++V L S SWQDLKD MR+AG+V F R G+V++ S DMK AI K
Sbjct: 116 RTDHRLVVENLSSRTSWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDMKNAISK 174
Query: 78 LDRSEF 83
LD +E
Sbjct: 175 LDGTEL 180
>gi|189211717|ref|XP_001942187.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979386|gb|EDU46012.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 340
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 25 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ LP SWQDLKD R++G DV +S+V R+R G TG V+Y + D+K A+ KLDR EF
Sbjct: 104 IANLPVETSWQDLKDFARQSGLDVVYSEVGRERDG-TGFVEYETAADLKAAVEKLDRREF 162
Query: 84 R 84
+
Sbjct: 163 K 163
>gi|112982956|ref|NP_001037676.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
gi|109706819|gb|ABG42996.1| splicing factor arginine/serine-rich 6 [Bombyx mori]
Length = 306
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 2 DRYSSYSSGG----SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 57
DR+ S GG G R++YR++V + S SWQDLKD+MR+AG+V ++ +
Sbjct: 86 DRHYERSGGGRSRYEYGPPTRTEYRLIVENVSSRISWQDLKDYMRQAGEVTYADAHKQHR 145
Query: 58 GMTGIVDYTSYDDMKYAIRKLDRSEF 83
G+V++ ++ DM+ AI KLD +E
Sbjct: 146 N-EGVVEFATHSDMRAAIEKLDGTEL 170
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ S+ D+K A+ K
Sbjct: 111 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASHSDLKNALDK 169
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 137
L E + ++ RS S S SRS SR RS S RSRSP+++ + S
Sbjct: 170 LSGKEINGRKIKLIEAAKKRSRSRSRSESSSRSRSRSRGRSASRSPRRSRSPAKAHNRS- 228
Query: 138 RSRSYSPRGKYSR-RSPSLSPARSASQRSPSGSPP 171
RSRS SP G S S S PA+ +S+ S S +PP
Sbjct: 229 RSRSGSPAGGASSPTSKSKEPAKRSSKMSKSATPP 263
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 2 DRYSSYSSGGSRGVS-RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
DR+SS G R R++ R++V L S SWQDLKD MR+AG+V F+ R +
Sbjct: 90 DRFSSRRPRGDRSAPPIRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-E 148
Query: 61 GIVDYTSYDDMKYAIRKLDRSEF 83
G+V++ SY D+K AI KL E
Sbjct: 149 GVVEFASYSDLKNAIEKLSGKEI 171
>gi|221130960|ref|XP_002164119.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Hydra magnipapillata]
Length = 264
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
+++R++VT L S W DLKD+ R AG+V F++ ++R G G+V++ SY +MK A++K
Sbjct: 111 TEWRLIVTNLSSRVGWMDLKDYFRSAGEVTFTKANKERVG-EGVVEFRSYREMKRALKKF 169
Query: 79 DRSEF 83
D SEF
Sbjct: 170 DGSEF 174
>gi|320168404|gb|EFW45303.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 239
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
R+ YRVLV L + SWQDLKD +R G +V F+ R+R G TG+V++ + DM++AIR
Sbjct: 91 RTQYRVLVENLSTRISWQDLKDFVRTCGVEVTFADAHRERDG-TGVVEFANSTDMRHAIR 149
Query: 77 KLD 79
+LD
Sbjct: 150 RLD 152
>gi|226471686|emb|CAX70924.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 371
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YRV+V L S SWQDLKD R+AG+V ++ + GIV++ +Y DMK AI K
Sbjct: 107 RTEYRVIVENLSSRVSWQDLKDLTRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEK 165
Query: 78 LDRSEF 83
D E
Sbjct: 166 FDGYEL 171
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G R++YR++V L S SWQDLKD MR+AG+V ++ ++ G++++ SY DMK
Sbjct: 105 GPPVRTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKEHTN-EGVIEFRSYSDMKR 163
Query: 74 AIRKLDRSEF 83
A+ KLD ++
Sbjct: 164 ALDKLDGTDI 173
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K A+ K
Sbjct: 109 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNALEK 167
Query: 78 LDRSEF 83
L E
Sbjct: 168 LSGKEM 173
>gi|261194216|ref|XP_002623513.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
gi|239588527|gb|EEQ71170.1| pre-RNA splicing factor Srp2 [Ajellomyces dermatitidis SLH14081]
Length = 258
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 57 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 112
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPYYSRSRSPSR 131
KLD EF+ + ++ + R+ SR PY SRS R PY R +
Sbjct: 113 EKLDGREFKGSRVLCTQDIQSLEDRQ------SRDPYRSRSPGRRGGYHPYDDYDRRGAP 166
Query: 132 SWSYSPRS---------RSYSPRGKYSRRSP 153
YSPR+ R Y R Y RR+P
Sbjct: 167 RGGYSPRNHYRERSPGRRDYYDRDGYGRRTP 197
>gi|325087601|gb|EGC40911.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 316
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 26/145 (17%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 114 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 169
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPY--YSRSRSP 129
KLD EF+ + ++ + R+ R PY SRS R PY Y R R P
Sbjct: 170 EKLDGREFKGSRVLCTQDIQSQEDRQ------PRDPYRSRSPGRRGGYHPYDDYDR-RGP 222
Query: 130 SRSWSYSPRSRSYSPRGKYSRRSPS 154
RS YSPR Y RSP+
Sbjct: 223 PRS--------GYSPRNHYRERSPA 239
>gi|225556594|gb|EEH04882.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 26/145 (17%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 112 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSETGHD---GRGFVEFETGSDLKTAV 167
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPY--YSRSRSP 129
KLD EF+ + ++ + R+ R PY SRS R PY Y R R P
Sbjct: 168 EKLDGREFKGSRVLCTQDIQSQEDRQ------PRDPYRSRSPGRRGGYHPYDDYDR-RGP 220
Query: 130 SRSWSYSPRSRSYSPRGKYSRRSPS 154
RS YSPR Y RSP+
Sbjct: 221 PRS--------GYSPRNHYRERSPA 237
>gi|147907282|ref|NP_001079543.1| keratin 5, gene 1 b [Xenopus laevis]
gi|28278124|gb|AAH44085.1| MGC52712 protein [Xenopus laevis]
Length = 261
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 6 SYSSGGSR-GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVD 64
S S G SR G R+++R++V L S SWQDLK MR+AG+V + R G+V+
Sbjct: 99 SNSGGNSRYGPPVRTEHRIIVENLSSRVSWQDLKGFMRKAGEVTYVDAHRSNRN-EGVVE 157
Query: 65 YTSYDDMKYAIRKLDRSEF 83
+ SY DMK A+ KLD E
Sbjct: 158 FASYTDMKSALDKLDGVEL 176
>gi|154284490|ref|XP_001543040.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150406681|gb|EDN02222.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 300
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 26/145 (17%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP + SWQDLKD R++G DV +S+ D G V++ + D+K A+
Sbjct: 98 RRTIYRMQISGLPET-SWQDLKDFARQSGLDVVYSEAGHD---GRGFVEFETGSDLKTAV 153
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSR----SPY--YSRSRSP 129
KLD EF+ + ++ + R+ R PY SRS R PY Y R R P
Sbjct: 154 EKLDGREFKGSRVLCTQDIQSQEDRQ------PRDPYRSRSPGRRGGYHPYDDYDR-RGP 206
Query: 130 SRSWSYSPRSRSYSPRGKYSRRSPS 154
RS YSPR Y RSP+
Sbjct: 207 PRS--------GYSPRNHYRERSPA 223
>gi|325182716|emb|CCA17171.1| splicing factor putative [Albugo laibachii Nc14]
Length = 224
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
+ YRV V+ L S SWQDLKD RR GDV + V D G +G+ + +YD+M+ AIRKL
Sbjct: 93 TQYRVTVSNLSSKISWQDLKDFFRRGGDVVHTNV--DHSG-SGVGSFATYDEMERAIRKL 149
Query: 79 DRSEF 83
DR +
Sbjct: 150 DRVKL 154
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 12 SRGVS----RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 67
SRG+ R + YRV ++GLP + SWQDLKD +R+ GDV S V DR G G + +
Sbjct: 75 SRGIDDARPRGTQYRVKISGLPDTMSWQDLKDFLRKGGDVVHSDV--DRRG-NGSASFAT 131
Query: 68 YDDMKYAIRKLDRSEFRNAFSRSYVRVREYD 98
D+M AIRKLD ++ VR+RE D
Sbjct: 132 PDEMLRAIRKLDGTDLDG----ERVRIREDD 158
>gi|221501413|gb|EEE27190.1| cold-inducible RNA binding protein, putative [Toxoplasma gondii
VEG]
Length = 1335
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 74
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 316 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQEGVRIGIIEYCSQEDMETA 375
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+ +LD +A V VR ++ SY P ++ S P S R PS
Sbjct: 376 LHELDGKRLFDA----RVEVRREEANASY-------PSFAEISSSLPPDSLIRPPSGRAP 424
Query: 135 YSPRSRSYSPRGKYSRRS 152
P+ S RG R S
Sbjct: 425 PGPKGASCRARGPPLRAS 442
>gi|221480768|gb|EEE19199.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 1335
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 74
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 316 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQEGVRIGIIEYCSQEDMETA 375
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+ +LD +A V VR ++ SY P ++ S P S R PS
Sbjct: 376 LHELDGKRLFDA----RVEVRREEANASY-------PSFAEISSSLPPDSLIRPPSGRAP 424
Query: 135 YSPRSRSYSPRGKYSRRS 152
P+ S RG R S
Sbjct: 425 PGPKGASCRARGPPLRAS 442
>gi|237845207|ref|XP_002371901.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211969565|gb|EEB04761.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1335
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 74
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 316 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQEGVRIGIIEYCSQEDMETA 375
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+ +LD +A V VR ++ SY P ++ S P S R PS
Sbjct: 376 LHELDGKRLFDA----RVEVRREEANASY-------PSFAEISSSLPPDSLIRPPSGRAP 424
Query: 135 YSPRSRSYSPRGKYSRRS 152
P+ S RG R S
Sbjct: 425 PGPKGASCRARGPPLRAS 442
>gi|221057011|ref|XP_002259643.1| Splicing factor [Plasmodium knowlesi strain H]
gi|193809715|emb|CAQ40417.1| Splicing factor, putative [Plasmodium knowlesi strain H]
Length = 312
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
Y V V+GLP S SWQDLKDH+R AG+ + VF++ G V + +DM AI K +
Sbjct: 110 YVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNG---IGEVSFFHKEDMLEAIEKFNG 166
Query: 81 SEFR-NAFSRSYVRVRE 96
S FR + +S + +RE
Sbjct: 167 STFRSHEGEKSKITIRE 183
>gi|326920602|ref|XP_003206558.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Meleagris
gallopavo]
Length = 233
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 73 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 131
Query: 78 LDRSEF 83
L E
Sbjct: 132 LSGKEI 137
>gi|320589309|gb|EFX01771.1| pre-RNA splicing factor [Grosmannia clavigera kw1407]
Length = 398
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+R+ +TGLP+ SWQDLKD RR+G +V FS+ +R G G V++ S D+ AI KLD
Sbjct: 158 HRMAITGLPNDTSWQDLKDFARRSGLEVVFSET--NRFG-DGSVEFESAQDLATAIEKLD 214
Query: 80 RSEFRNAFSRSYVRV 94
+EFR+ V V
Sbjct: 215 NTEFRDKIVTCSVGV 229
>gi|449017556|dbj|BAM80958.1| similar to Gbp1p protein [Cyanidioschyzon merolae strain 10D]
Length = 293
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
RV V L S SWQ LKDHMR+AG+V F++VF +R G G+V+Y + D AI L
Sbjct: 95 RVYVGNLAWSVSWQALKDHMRKAGEVVFAEVFTERDGRSRGCGVVEYATEADSANAIATL 154
Query: 79 DRSEFR 84
+ +E +
Sbjct: 155 NDTELQ 160
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
+++V LP S +WQDLKD R G++ + + D+ G G + + S +D + AI+ +
Sbjct: 216 KIIVWNLPYSYTWQDLKDEFRACGNIIRADILIDQEGRSRGAGTIVFESEEDAQRAIQMM 275
Query: 79 DRSEF 83
DR+E
Sbjct: 276 DRAEL 280
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 106 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 164
Query: 78 LDRSEF 83
L E
Sbjct: 165 LSGKEI 170
>gi|432936464|ref|XP_004082128.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Oryzias latipes]
Length = 289
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V F R G+V++ S D+K AI K
Sbjct: 124 RTEHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDLKNAISK 182
Query: 78 LDRSEF 83
LD +E
Sbjct: 183 LDGTEL 188
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Monodelphis
domestica]
Length = 265
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|223649236|gb|ACN11376.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 266
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ S DM+ A+ K
Sbjct: 40 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFGSRSDMRRALDK 98
Query: 78 LDRSEF 83
LD ++
Sbjct: 99 LDGTDI 104
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9 [Canis
lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like [Ailuropoda
melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15 [Canis
lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Felis
catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Felis
catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3 [Felis
catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cricetulus
griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|432936462|ref|XP_004082127.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Oryzias latipes]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V F R G+V++ S D+K AI K
Sbjct: 107 RTEHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPTKN-EGVVEFASRSDLKNAISK 165
Query: 78 LDRSEF 83
LD +E
Sbjct: 166 LDGTEL 171
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 8 SSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTS 67
SSG G R+++R++V L S SWQDLKD MR+AG+V F R G+V++ S
Sbjct: 100 SSGPRYGPPVRTEHRLIVENLSSRISWQDLKDMMRKAGEVTFVDAHRPNKN-EGVVEFAS 158
Query: 68 YDDMKYAIRKLDRSEF 83
DMK AI K D +E
Sbjct: 159 RSDMKSAISKFDGTEL 174
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|345309522|ref|XP_001517768.2| PREDICTED: serine/arginine-rich splicing factor 5-like, partial
[Ornithorhynchus anatinus]
Length = 251
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 89 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 147
Query: 78 L 78
L
Sbjct: 148 L 148
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|302894677|ref|XP_003046219.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
gi|256727146|gb|EEU40506.1| hypothetical protein NECHADRAFT_33691 [Nectria haematococca mpVI
77-13-4]
Length = 329
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+
Sbjct: 97 RRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAV 155
Query: 76 RKLDRSEF---RNAFSRS 90
KLD EF RN +RS
Sbjct: 156 EKLDGREFKGQRNMLTRS 173
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus scrofa]
Length = 221
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+RSDYR+ VT L + QDLK M++AGDV FS R R G G+V++ S DM+ A++
Sbjct: 137 QRSDYRLSVTNLSTRCDAQDLKAVMQKAGDVVFSDAHRRRVG-EGVVEFASRKDMERALK 195
Query: 77 KLDRSEF 83
KLD E
Sbjct: 196 KLDGLEI 202
>gi|340516476|gb|EGR46724.1| predicted protein [Trichoderma reesei QM6a]
Length = 311
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 20/130 (15%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ AI KLD
Sbjct: 103 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAIEKLDGR 161
Query: 82 EFRNAFSRSYVRVR-EYDSR-RSYSRSPSRSPY-------YSR--------SRSRSPYYS 124
EF+ + + V ++ + R R+ SRSP R PY Y R SR P YS
Sbjct: 162 EFKGSRVQCIVDLQPDMPPRDRARSRSPGRRPYPPPAFDNYDRRGGPHRGYSREAPPAYS 221
Query: 125 -RSRSPSRSW 133
R RSP R +
Sbjct: 222 YRDRSPRREY 231
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 104 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 162
Query: 78 LDRSEF 83
L E
Sbjct: 163 LSGKEI 168
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 104 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 162
Query: 78 LDRSEF 83
L E
Sbjct: 163 LSGKEI 168
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 104 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 162
Query: 78 LDRSEF 83
L E
Sbjct: 163 LSGKEI 168
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 105 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 163
Query: 78 LDRSEF 83
L E
Sbjct: 164 LSGKEI 169
>gi|66360300|ref|XP_627232.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
gi|46228840|gb|EAK89710.1| splicing factor SRP40 like 2x RRM domains [Cryptosporidium parvum
Iowa II]
Length = 416
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R +RV V L +ASW+DLKD+ R+ G+V +S VF +G G+V+Y + ++MK A+ +
Sbjct: 115 RKHFRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEE 174
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYS-------RSP---SRSPYYSRSRSRSPYYS--- 124
+ F R + + D + + RSP S PY + R+R Y S
Sbjct: 175 IPNLPFLGKSIRVEEDIGQLDRELAAANGYGAKRRSPPPFSSGPYNTGGRARGRYPSPSR 234
Query: 125 ---RSRSPSRSWSYSPRSRSY 142
RSRSP R Y R RS+
Sbjct: 235 FRMRSRSPRRD-PYDRRERSH 254
>gi|55824572|gb|AAV66406.1| splicing factor arginine/serine-rich protein 5 [Macaca
fascicularis]
Length = 208
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 81 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEK 139
Query: 78 LDRSEF 83
L E
Sbjct: 140 LSGKEI 145
>gi|402085268|gb|EJT80166.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 317
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 30/139 (21%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP+ SWQDLKD R++ DV +S+ R G G V++ + D+ A+
Sbjct: 105 RRTPYRMQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNG-EGFVEFETAADLATAV 163
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
LD EF+ R + + P R RSRSP
Sbjct: 164 DALDGKEFKEKVVRCVANAQ------------ADPPVRDRGRSRSP-------------- 197
Query: 136 SPRSRSYSPRG-KYSRRSP 153
P RSY+P G Y RR P
Sbjct: 198 -PGRRSYAPPGDDYDRRGP 215
>gi|449274700|gb|EMC83778.1| Splicing factor, arginine/serine-rich 5 [Columba livia]
Length = 265
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI K
Sbjct: 104 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNAIEK 162
Query: 78 LDRSEF 83
L E
Sbjct: 163 LSGKEI 168
>gi|402085269|gb|EJT80167.1| hypothetical protein GGTG_00170 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 30/139 (21%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ YR+ ++GLP+ SWQDLKD R++ DV +S+ R G G V++ + D+ A+
Sbjct: 105 RRTPYRMQISGLPNDTSWQDLKDFARQSQLDVVYSETGRSNNG-EGFVEFETAADLATAV 163
Query: 76 RKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
LD EF+ R + + P R RSRSP
Sbjct: 164 DALDGKEFKEKVVRCVANAQ------------ADPPVRDRGRSRSP-------------- 197
Query: 136 SPRSRSYSPRG-KYSRRSP 153
P RSY+P G Y RR P
Sbjct: 198 -PGRRSYAPPGDDYDRRGP 215
>gi|410897813|ref|XP_003962393.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Takifugu
rubripes]
Length = 288
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+++R++V L S SWQDLKD MR+AG+V F R G+V++ S DMK AI K
Sbjct: 110 RTEHRLIVENLSSRISWQDLKDMMRKAGEVTFVDAHRPNKN-EGVVEFASRSDMKSAISK 168
Query: 78 LDRSEF 83
D +E
Sbjct: 169 FDGTEL 174
>gi|358398894|gb|EHK48245.1| hypothetical protein TRIATDRAFT_298403 [Trichoderma atroviride IMI
206040]
Length = 312
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD
Sbjct: 103 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGR 161
Query: 82 EFRNAFSRSYVRVR-EYDSR--RSYSRSPSRSPY 112
EF+ A + V + + R R+ SRSP R PY
Sbjct: 162 EFKGARVQCLVDTQPDMPPRDPRARSRSPGRRPY 195
>gi|67624493|ref|XP_668529.1| ENSANGP00000021579 [Cryptosporidium hominis TU502]
gi|54659743|gb|EAL38308.1| ENSANGP00000021579 [Cryptosporidium hominis]
Length = 329
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R +RV V L +ASW+DLKD+ R+ G+V +S VF +G G+V+Y + ++MK A+ +
Sbjct: 28 RKHFRVCVFNLDDNASWRDLKDYGRQIGEVNYSAVFHYQGQKVGVVEYLTVEEMKRALEE 87
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYS-------RSP---SRSPYYSRSRSRSPYYS--- 124
+ F R + + D + + RSP S PY + R+R Y S
Sbjct: 88 IPNLPFLGKSIRVEEDIGQLDRELAAANGYGAKRRSPPPFSSGPYNTGGRARGRYPSPSR 147
Query: 125 ---RSRSPSRSWSYSPRSRSY 142
RSRSP R Y R RS+
Sbjct: 148 FRMRSRSPRRD-PYDRRERSH 167
>gi|213514036|ref|NP_001133737.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
gi|209155158|gb|ACI33811.1| Splicing factor, arginine/serine-rich 6 [Salmo salar]
Length = 261
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ S DM+ A+ K
Sbjct: 37 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFGSRSDMRRALDK 95
Query: 78 LDRSEF 83
LD ++
Sbjct: 96 LDGTDI 101
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 11 GSRGVSRRSD-YRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSY 68
RG R+ D +RV ++GL SWQDLKD R A DV ++ V RDR G G V++ S
Sbjct: 100 NDRGGDRKEDIFRVNISGLAPGVSWQDLKDFGRTADVDVTYTNVSRDREG-EGTVEFRSA 158
Query: 69 DDMKYAIRKLDRSEFRNAF 87
D M+ A+ KLD +EF+
Sbjct: 159 DQMEQAVSKLDGTEFKGEI 177
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+R++V G+ SWQDLKD R+AG+V + V R+ G G+++Y+S DD A+RKLD
Sbjct: 103 FRLIVKGISHETSWQDLKDFARQAGNVIRADVDRNMPG-EGLIEYSSQDDADNALRKLDG 161
Query: 81 SEFRNAFSRSYVRVREYDSRRSYSRSPS 108
++ + + R RR SRSPS
Sbjct: 162 TDLKGMVV-TLFEDRPGGGRRDRSRSPS 188
>gi|401403100|ref|XP_003881410.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325115822|emb|CBZ51377.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 1255
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYA 74
+R +RV+ L WQDLKD R AG+V F+ V ++ G+ GI++Y S +DM+ A
Sbjct: 319 GKRLPFRVVCHNLDPRVHWQDLKDFGREAGEVNFTNVLHNQDGLRIGIIEYCSQEDMETA 378
Query: 75 IRKLDRSEFRNAFSRSYVRVREYDSRRSY 103
+R+L+ +A V VR ++ SY
Sbjct: 379 LRELNGRRLFDA----RVEVRREEANASY 403
>gi|198421232|ref|XP_002126906.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 1 [Ciona intestinalis]
Length = 272
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR++V L S +WQDLKD+MR+ G+V ++ R R G+V+++S +MKYAI KL+
Sbjct: 107 YRLIVENLSSRVTWQDLKDYMRQCGEVVYADANRYRRN-EGVVEFSSRKEMKYAIEKLNG 165
Query: 81 SEF 83
+E
Sbjct: 166 TEI 168
>gi|157874667|ref|XP_001685752.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68128825|emb|CAJ05906.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 351
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 225 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLFS---GGRGMVEFAVPEDAAR 281
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
I +L SE A Y+R D+ +R R S+ R+R +SR
Sbjct: 282 CITELQASELEGA--TLYLREDREDTVLINTRRKIRDARDSQLRARKAEAEKSR 333
>gi|198421230|ref|XP_002126938.1| PREDICTED: similar to splicing factor, arginine/serine-rich 4
isoform 2 [Ciona intestinalis]
Length = 280
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR++V L S +WQDLKD+MR+ G+V ++ R R G+V+++S +MKYAI KL+
Sbjct: 115 YRLIVENLSSRVTWQDLKDYMRQCGEVVYADANRYRRN-EGVVEFSSRKEMKYAIEKLNG 173
Query: 81 SEF 83
+E
Sbjct: 174 TEI 176
>gi|46134285|ref|XP_389458.1| hypothetical protein FG09282.1 [Gibberella zeae PH-1]
Length = 330
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+
Sbjct: 99 RRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAV 157
Query: 76 RKLDRSEF---RNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSP 121
KLD EF R SR+ + V D R +P+ P+ + P
Sbjct: 158 EKLDGREFKGQRVQLSRTCLPVSVAD-RALLDDAPTLLPWTITTAVALP 205
>gi|146097473|ref|XP_001468113.1| HNRNPA [Leishmania infantum JPCM5]
gi|134072480|emb|CAM71191.1| HNRNPA [Leishmania infantum JPCM5]
Length = 327
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 201 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLFS---GGRGMVEFAVPEDAAR 257
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
I +L SE A Y+R D+ +R R ++ R+R +SR
Sbjct: 258 CITELQASELEGA--TLYLREDREDTVLINTRRKIRDARDAQLRARKAEAEKSR 309
>gi|408390763|gb|EKJ70150.1| hypothetical protein FPSE_09676 [Fusarium pseudograminearum CS3096]
Length = 312
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+
Sbjct: 99 RRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAV 157
Query: 76 RKLDRSEFR 84
KLD EF+
Sbjct: 158 EKLDGREFK 166
>gi|301118162|ref|XP_002906809.1| pre-mRNA-splicing factor SF2-like protein [Phytophthora infestans
T30-4]
gi|262108158|gb|EEY66210.1| pre-mRNA-splicing factor SF2-like protein [Phytophthora infestans
T30-4]
Length = 184
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+R+D+RV VT LP W+++KD +R G+V + + D + I ++ + +DM+ A++
Sbjct: 55 QRTDFRVRVTDLPRDVDWRNVKDFLRTGGEVTYCNIEAD---GSAIAEFQTKEDMEDAVK 111
Query: 77 KLDRSEFRNAFSRSYVRV 94
KLD +EFR SYVRV
Sbjct: 112 KLDDTEFRG----SYVRV 125
>gi|340057668|emb|CCC52014.1| HNRNPA [Trypanosoma vivax Y486]
Length = 313
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+ + RV V+GL +W LKDH+R+AG+V F ++F G +V++ + +D
Sbjct: 173 GIKKLVGQRVQVSGLSDETTWHTLKDHLRQAGEVTFCKIF---AGGRAVVEFVTPEDASR 229
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
AI +L SE A ++R D+ +R R ++ R+R R R
Sbjct: 230 AITELQASELEGA--TLFLREDREDTVLVNTRRKIREARDAQLRARKEEAERKR 281
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R G+V++ S+ D+K A+ K
Sbjct: 107 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPNLN-EGVVEFASHSDLKNALEK 165
Query: 78 LDRSEF 83
L E
Sbjct: 166 LSGKEI 171
>gi|171682128|ref|XP_001906007.1| hypothetical protein [Podospora anserina S mat+]
gi|170941023|emb|CAP66673.1| unnamed protein product [Podospora anserina S mat+]
Length = 319
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R G DV +S+ R+ G G V++ + D++ A+
Sbjct: 105 RRTPHRLQISGLPPDTSWQDLKDFARTPGLDVVYSETGRN-GSSEGFVEFETAADLRTAV 163
Query: 76 RKLDRSEFR----NAFSRSYVRVREYDSRRSYS--RSPSRSPYYSRSRSRSPYYSRSRSP 129
KL+ +F+ + + + D RS S R P R Y R R P R+ SP
Sbjct: 164 EKLNERDFKGVRVTCTANTQADIPRGDRGRSMSPRRGPGRMNDYDR---RGP--PRAYSP 218
Query: 130 SRSWSYSP--RSRSYSPRGKY--SRRSPSLSPAR 159
R+ Y P R RS PR Y R P SP R
Sbjct: 219 HRNGDYRPDYRDRSPVPRRDYYEDRARPYRSPPR 252
>gi|401427578|ref|XP_003878272.1| putative RNA binding protein rggm [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494520|emb|CBZ29822.1| putative RNA binding protein rggm [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 327
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 201 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLFS---GGRGMVEFAVPEDAAR 257
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
I +L SE A Y+R D+ +R R ++ R+R +SR
Sbjct: 258 CITELQASELEGA--TLYLREDREDTVLINTRRKIRDARDAQLRARKAEAEKSR 309
>gi|342876767|gb|EGU78325.1| hypothetical protein FOXB_11186 [Fusarium oxysporum Fo5176]
Length = 1835
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+
Sbjct: 1623 RRTPHRMQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAV 1681
Query: 76 RKLDRSEFR 84
KLD EF+
Sbjct: 1682 EKLDGREFK 1690
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++Y V+V L S SWQDLKD+ R+ G V ++ + R G G+V++ S DD+ AI K
Sbjct: 104 RTNYSVIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIG-EGVVEFESKDDLNTAIEK 162
Query: 78 LDRSEF 83
LD +E
Sbjct: 163 LDDTEL 168
>gi|440794423|gb|ELR15584.1| hypothetical protein ACA1_164640 [Acanthamoeba castellanii str.
Neff]
Length = 212
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 8/69 (11%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIR-- 76
RV V LP SWQDLKDHMR+AG+V + VF D G GIV+Y++ ++ + AI+
Sbjct: 26 RVYVGNLPWQTSWQDLKDHMRKAGNVTRADVFIDETGRSKGCGIVEYSTPEEAQNAIKTL 85
Query: 77 ---KLDRSE 82
KLD +E
Sbjct: 86 NDTKLDETE 94
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKLD 79
V + LP + SWQDLKD R+AG++ + V D G + G V + S D + AIR D
Sbjct: 135 VFIGNLPYTTSWQDLKDRFRQAGNIIRADVLLDTTGRSKGQGTVLFESPGDAQKAIRMFD 194
Query: 80 RSEFR 84
++F+
Sbjct: 195 NTDFQ 199
>gi|19115482|ref|NP_594570.1| mRNA export factor Srp2 [Schizosaccharomyces pombe 972h-]
gi|26399937|sp|P78814.2|SRP2_SCHPO RecName: Full=Pre-mRNA-splicing factor srp2
gi|2749972|gb|AAC39357.1| putative pre-mRNA splicing factor [Schizosaccharomyces pombe]
gi|6013092|emb|CAB57400.1| mRNA export factor Srp2 [Schizosaccharomyces pombe]
Length = 365
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR+ +R++V L SWQDLKD MR+AG+ F+ R+ G G+V++++ +DM+ A+
Sbjct: 94 RRTGFRLIVENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALT 152
Query: 77 KLD 79
L+
Sbjct: 153 SLN 155
>gi|1749534|dbj|BAA13825.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR+ +R++V L SWQDLKD MR+AG+ F+ R+ G G+V++++ +DM+ A+
Sbjct: 90 RRTGFRLIVENLSEDVSWQDLKDVMRKAGEPTFTDAHRENPG-AGVVEFSTEEDMRNALT 148
Query: 77 KLD 79
L+
Sbjct: 149 SLN 151
>gi|440637919|gb|ELR07838.1| hypothetical protein GMDG_00459 [Geomyces destructans 20631-21]
Length = 296
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GL SWQDLKD R++ DV +S+ RDR G V++ + D++ A+
Sbjct: 97 RRTPHRMQISGLSGETSWQDLKDFARQSSLDVVYSETGRDRDGKGSFVEFETAADLRTAV 156
Query: 76 RKLDRSEFRNA 86
KLD EF+ A
Sbjct: 157 EKLDGREFKGA 167
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Metaseiulus
occidentalis]
Length = 303
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MDRYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGM 59
MD+Y + +R+DYRV+V L + SWQDLKD MR+ G +VC++ + R
Sbjct: 96 MDKYGPF---------KRTDYRVIVGNLSTRVSWQDLKDMMRKVGCEVCYADAHKHRKN- 145
Query: 60 TGIVDYTSYDDMKYAIRKLDRSEF 83
++++ + DMK AI+K D E
Sbjct: 146 EAVIEFATRSDMKRAIQKYDGHEV 169
>gi|398021379|ref|XP_003863852.1| RNA binding protein rggm, putative [Leishmania donovani]
gi|322502086|emb|CBZ37169.1| RNA binding protein rggm, putative [Leishmania donovani]
Length = 279
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 153 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLF---SGGRGMVEFAVPEDAAR 209
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
I +L SE A Y+R D+ +R R ++ R+R +SR
Sbjct: 210 CITELQASELEGA--TLYLREDREDTVLINTRRKIRDARDAQLRARKAEAEKSR 261
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+R+ +R++V L S W++LK +MR+AG+V F+ RDR G+V++ S DMK A++
Sbjct: 88 QRTYHRLIVENLSSRIDWRELKAYMRKAGNVTFADAHRDRMN-EGVVEFASRHDMKQALK 146
Query: 77 KLDRSEFRNAFSRSY 91
D +E + R Y
Sbjct: 147 MFDDTELNGRYIRLY 161
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD--RGGMTGIVDYTSYDDMKYA 74
RR+++ V+V LP ASWQDLKD RR+G V ++ F D G G VD+ D + A
Sbjct: 138 RRTEFCVVVRNLPPRASWQDLKDFFRRSGKVTYANAFIDSNTGEQIGEVDFEYLTDAENA 197
Query: 75 IRKLDRSEFRNAFSRSYVRV 94
D EF N F S ++
Sbjct: 198 CDDCDGIEFENRFGVSKIQC 217
>gi|427777525|gb|JAA54214.1| Putative alternative splicing factor asf/sf2 [Rhipicephalus
pulchellus]
Length = 333
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 24/86 (27%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFS-------------QVFRDRGGMT---- 60
R++Y++LV L +S SWQDLKD MR+AGDV ++ R G +T
Sbjct: 93 RTNYQLLVENLSTSVSWQDLKDFMRQAGDVTYTXNLSTSVSWQDLKDFMRQAGDVTYTDA 152
Query: 61 -------GIVDYTSYDDMKYAIRKLD 79
G+V++ SY DMK A+R LD
Sbjct: 153 HKLRRHQGVVEFASYSDMKNALRSLD 178
>gi|308482317|ref|XP_003103362.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
gi|308260152|gb|EFP04105.1| hypothetical protein CRE_27700 [Caenorhabditis remanei]
Length = 201
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G R+ ++R+ VT LP W DLKD+M+ D+ F GIV++TSY D+KY
Sbjct: 57 GPQRKFNFRIRVTNLPRPTRWHDLKDYMQSIKDIVF-----------GIVEFTSY-DVKY 104
Query: 74 AIRKLDRSEFR 84
AIRK D +FR
Sbjct: 105 AIRKFDGRKFR 115
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR+LV L S+ SW++LKD M +AG+VCF+ V+ R GIV++ S M+ A++KL+
Sbjct: 121 YRLLVENLSSAISWRELKDFMNQAGEVCFTDVYPQR--REGIVEFESSSAMENALKKLNG 178
Query: 81 SEF 83
E
Sbjct: 179 EEL 181
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Oreochromis
niloticus]
Length = 342
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 5 SSYSSGG--SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGI 62
SS++ G G R+++R++V L S SWQDLKD MR+AG+V ++ + R G+
Sbjct: 91 SSWNRTGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKGRAN-EGV 149
Query: 63 VDYTSYDDMKYAIRKLDRSEF 83
+++ S DMK A+ KLD ++
Sbjct: 150 IEFRSRSDMKRALEKLDGTDI 170
>gi|71748492|ref|XP_823301.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832969|gb|EAN78473.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 320
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+ + RV V+GL +W LKDH+R+AG+V F +VF G +V++ + +D
Sbjct: 185 GIKKLVGQRVQVSGLSDETTWHTLKDHLRQAGEVTFCKVF---SGGRAVVEFVTPEDAAR 241
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
AI +L SE A ++R D+ +R R ++ R+R + R
Sbjct: 242 AITELQASELEGA--TLFLREDREDTVLVNTRRKIREVRDAQLRARKEEMEKKR 293
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K AI KL
Sbjct: 109 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKL 164
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G + R+ Y+V +TGLP W +LKD +R+AGDV ++ V G G+ ++++ DDM
Sbjct: 118 GAAPRTGYKVRITGLPEGMRWSELKDFVRKAGDVTYADVR----GDEGVAEFSNRDDMSR 173
Query: 74 AIRKLDRSEF 83
A+R+LD + F
Sbjct: 174 AVRELDDTYF 183
>gi|336367304|gb|EGN95649.1| hypothetical protein SERLA73DRAFT_186792 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380022|gb|EGO21176.1| hypothetical protein SERLADRAFT_441550 [Serpula lacrymans var.
lacrymans S7.9]
Length = 324
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 3 RYSSYSSGGSRGVS-----RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 57
R Y GG RG R R++V+G+ SWQDLKD R AG V F+ + RD
Sbjct: 95 RRDVYEGGGERGFGSARSRRPPGIRLIVSGISRDTSWQDLKDFGREAGSVSFADIDRDFP 154
Query: 58 GMTGIVDYTSYDDMKYAIRKLDRSEFR 84
G GI++Y S DD A++ LD + R
Sbjct: 155 GQ-GILEYLSRDDADRAVKDLDGKDLR 180
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM-TGIVDYTSYDDMKYAIR 76
R+DYR+ + L S SWQDLKD++R D+ S + + IV++ S DD++YAI+
Sbjct: 111 RTDYRLYINNLSSRVSWQDLKDYIRNKTDISVSYADAHKQSVGQAIVEFDSKDDLRYAIK 170
Query: 77 KLDRSEF 83
KLD +E
Sbjct: 171 KLDNTEI 177
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 82
++++ LP WQ LKDHMR+AG V + + + G VD+ DMKYA+RK+D SE
Sbjct: 112 LVISNLPHGCRWQHLKDHMRKAGPVGYVNISHGK----GYVDFIHKSDMKYALRKMDGSE 167
Query: 83 F 83
Sbjct: 168 L 168
>gi|261333219|emb|CBH16214.1| HNRNPA [Trypanosoma brucei gambiense DAL972]
Length = 340
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G+ + RV V+GL +W LKDH+R+AG+V F +VF G +V++ + +D
Sbjct: 205 GIKKLVGQRVQVSGLSDETTWHTLKDHLRQAGEVTFCKVF---SGGRAVVEFVTPEDAAR 261
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
AI +L SE A ++R D+ +R R ++ R+R + R
Sbjct: 262 AITELQASELEGA--TLFLREDREDTVLVNTRRKIREVRDAQLRARKEEMEKKR 313
>gi|56797744|ref|NP_001008732.1| serine/arginine-rich splicing factor 6b [Danio rerio]
gi|56541079|gb|AAH86820.1| Splicing factor, arginine/serine-rich 6b [Danio rerio]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR++V L S SWQDLKD MR+AG+V ++ ++R G++++ S+ DM+ A+ K
Sbjct: 111 RTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTN-EGVIEFRSHSDMRRALDK 169
Query: 78 LDRSEFRNAFSRSYVR 93
LD ++ N V
Sbjct: 170 LDVTDI-NGRKIRLVE 184
>gi|349802333|gb|AEQ16639.1| putative serine arginine-rich splicing factor 6 [Pipa carvalhoi]
Length = 93
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 28 LPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
L + SWQDLKD MRRAG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 3 LSTRCSWQDLKDFMRRAGEVTYADAHKERTN-EGVIEFRSYSDMKRALEKLDGTEI 57
>gi|443710288|gb|ELU04543.1| hypothetical protein CAPTEDRAFT_220292 [Capitella teleta]
Length = 291
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 4 YSSYSS------GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG 57
Y+SY+ G R+ YR++V L S SWQDLKD+MR+AG+V ++ + +
Sbjct: 97 YNSYAPPRRSARDSRYGPPVRTQYRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKSKR 156
Query: 58 GMTGIVDYTSYDDMKYAIRKLDRSEF 83
GIV++ + DM AIRKL+++E
Sbjct: 157 N-EGIVEFATRSDMDNAIRKLNKTEI 181
>gi|389640647|ref|XP_003717956.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
gi|351640509|gb|EHA48372.1| hypothetical protein MGG_11457 [Magnaporthe oryzae 70-15]
Length = 331
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R++ DV +S+ R+ G G V++ + D+ A+
Sbjct: 111 RRTAFRMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNG-EGFVEFETAADLASAV 169
Query: 76 RKLDRSEFRNAFSRSYVRVR 95
LD EF++ R +
Sbjct: 170 EALDGKEFKDKIVRCVANTQ 189
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+R+DYRV VT LP W+++KD +R G+V + + D + I ++ + DDM+ AI+
Sbjct: 110 QRTDYRVRVTDLPRDVDWRNVKDFLRTGGEVTYCNIEADG---SAIAEFQTKDDMEDAIK 166
Query: 77 KLDRSEF 83
KLD +EF
Sbjct: 167 KLDDTEF 173
>gi|389640645|ref|XP_003717955.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
gi|351640508|gb|EHA48371.1| hypothetical protein, variant [Magnaporthe oryzae 70-15]
Length = 330
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAI 75
RR+ +R+ ++GLP SWQDLKD R++ DV +S+ R+ G G V++ + D+ A+
Sbjct: 109 RRTAFRMQISGLPVDTSWQDLKDFARQSQLDVVYSETGRNNNG-EGFVEFETAADLASAV 167
Query: 76 RKLDRSEFRNAFSRSYVRVR 95
LD EF++ R +
Sbjct: 168 EALDGKEFKDKIVRCVANTQ 187
>gi|403418011|emb|CCM04711.1| predicted protein [Fibroporia radiculosa]
Length = 328
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+R++V+G+ SWQDLKD R AG V ++ + RD G GI++Y S DD + A+++LD
Sbjct: 95 FRLVVSGISRDTSWQDLKDFGREAGSVSYADIDRDAAG-EGILEYLSRDDAERAVKELDG 153
Query: 81 SEFR 84
+ R
Sbjct: 154 KDLR 157
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
R++V+G+ SWQDLKD R AG++ F+ + RD G G+++Y S DD +A++ LD
Sbjct: 101 RLIVSGISRDTSWQDLKDFGREAGNITFADIDRDVPG-QGVLEYMSRDDADHAVKTLDGK 159
Query: 82 EFR 84
+ R
Sbjct: 160 DLR 162
>gi|325179817|emb|CCA14220.1| RNA binding protein putative [Albugo laibachii Nc14]
Length = 360
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKL 78
RV V LP + WQ LKDHM++AG V + V + GG + G+V++++ D+ + AI L
Sbjct: 159 RVYVGNLPWTVKWQALKDHMKQAGTVIHADVLEEAGGWSKGCGLVEFSTPDEAQNAIDML 218
Query: 79 DRSEF--RNAFSRS 90
+ +E RN F R
Sbjct: 219 NDTELEGRNIFVRE 232
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
RV V L WQDLKDHMR AGDV + V + GG GIV Y + + + AI L
Sbjct: 71 RVYVGNLSWKVKWQDLKDHMRSAGDVEHA-VIMEVGGRSKGCGIVTYATESEAQNAIETL 129
Query: 79 DRSEF--RNAFSRS 90
+ +E R F R
Sbjct: 130 NDTELDGRKIFVRE 143
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF-RDRGGMTGIVDYTSYDDMK 72
G ++ + V V L S SWQDLKD MR+AG+V + D G G+V Y DD K
Sbjct: 142 GAPEKTRWTVEVDNLSSRCSWQDLKDFMRKAGEVTYGDAHGSDIGRNRGVVCYEREDDAK 201
Query: 73 YAIRKLDRSEFRNAFSRSYVRVRE 96
AI +LD EF + +VRE
Sbjct: 202 RAIEELDGREFNGRDVKLAFKVRE 225
>gi|154343704|ref|XP_001567796.1| putative RNA-binding protein RGGm [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065130|emb|CAM40556.1| putative RNA-binding protein RGGm [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 183
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 58 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLF---SGGRGMVEFAVPEDAAR 114
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
I +L SE A Y+R D+ +R R ++ R+R ++R
Sbjct: 115 CITELQGSELEGA--TLYLREDREDTVLINTRRKIRDARDAQLRARKEEAEKAR 166
>gi|156402467|ref|XP_001639612.1| predicted protein [Nematostella vectensis]
gi|156226741|gb|EDO47549.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+ +R+ V L S SWQDLKD+ R+ GDV + + + G G++++ + D+K A+RK
Sbjct: 98 RTPWRMTVENLSSRVSWQDLKDYCRQIGDVTYGDAHKQKQG-EGVIEFATKKDLKKALRK 156
Query: 78 LDRSEFR 84
LD E +
Sbjct: 157 LDGKELK 163
>gi|328771467|gb|EGF81507.1| hypothetical protein BATDEDRAFT_87457 [Batrachochytrium
dendrobatidis JAM81]
Length = 557
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF-RD-RGGMTGIVDYTSYDDMKYAIRKLD 79
RV V L WQDLKD+MR+ G+V F+ + RD R G+V+Y+S DD + AIR+L
Sbjct: 150 RVYVGNLAFGCGWQDLKDYMRKCGNVLFADIIMRDGRSLGCGVVEYSSPDDAQRAIRELH 209
Query: 80 RSEFRNAFSRSYV--RVREYDSRR 101
S N R+ + RE DSRR
Sbjct: 210 DS---NHMGRTLLVREDREADSRR 230
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
++ V LP +W+DLKD R+ V ++VF D G G V++ + + AI
Sbjct: 297 KIFVGNLPFVVNWKDLKDLFRKVASVVRAEVFEDHDGRSKGVGTVEFETPQLARNAISMF 356
Query: 79 DRSEFR 84
D E+
Sbjct: 357 DGYEWH 362
>gi|126274640|ref|XP_001388006.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213876|gb|EAZ63983.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 271
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAG--DVCFSQVFRD--RGGMTGIVDYTSYDDMKY 73
R YRV +T LP +A+WQDLKD +R F+++ RD G ++G +++ S ++++
Sbjct: 82 RGKYRVKITNLPDNAAWQDLKDFVREKTGYQGLFAKINRDYESGEVSGSLEFASAEELER 141
Query: 74 AIRKLDRSEFRNA 86
AI LD++EF++A
Sbjct: 142 AIPLLDKAEFQDA 154
>gi|353242017|emb|CCA73791.1| hypothetical protein PIIN_11698 [Piriformospora indica DSM 11827]
Length = 262
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
R++VTG+ SWQDLKD R+AG+V F+ + RD G+++Y++ ++ AIR LD
Sbjct: 108 IRLVVTGVSRDTSWQDLKDFARQAGNVTFADIDRDVPNQ-GVIEYSTREEADQAIRDLDG 166
Query: 81 SEFR 84
E R
Sbjct: 167 KEIR 170
>gi|448111013|ref|XP_004201740.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359464729|emb|CCE88434.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 281
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVC--FSQVFR--DRGGMTGIVDYTSYDDMKY 73
R +RV VT LP +WQD KD +R ++ F++VFR D G + G +++ S +++
Sbjct: 81 RGQFRVKVTNLPDGTAWQDFKDFVRDKTELAPTFAKVFRNYDTGEVIGALEFASAEELAQ 140
Query: 74 AIRKLDRSEFRNAF 87
A+ L+ SEF+ A
Sbjct: 141 AVPLLNESEFQEAI 154
>gi|448096991|ref|XP_004198563.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359379985|emb|CCE82226.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 280
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVC--FSQVFR--DRGGMTGIVDYTSYDDMKY 73
R +RV VT LP +WQD KD +R ++ F++VFR D G + G +++ S +++
Sbjct: 81 RGQFRVKVTNLPDGTAWQDFKDFVRDKTELAPTFAKVFRNYDTGEVIGALEFASAEELAQ 140
Query: 74 AIRKLDRSEFRNAF 87
A+ L+ SEF+ A
Sbjct: 141 AVPLLNESEFQEAI 154
>gi|154342210|ref|XP_001567053.1| RNA binding protein rggm [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064382|emb|CAM42473.1| RNA binding protein rggm [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 183
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
GV + RV V+GL +W LKDH+R+AGD+ F ++F G G+V++ +D
Sbjct: 58 GVKKLVGQRVQVSGLSDETTWHTLKDHLRQAGDITFCRLF---SGGRGMVEFAVPEDAAR 114
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSR 127
I +L SE A Y+R D+ +R R ++ R+R + R
Sbjct: 115 CITELQGSELEGA--TLYLREDREDTVLINTRRKIRDARDAQLRARKEEAEKVR 166
>gi|310798588|gb|EFQ33481.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 312
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD
Sbjct: 105 MQITGLPTDTSWQDLKDFARQSSLDVVYSETGRD-GNGRGFVEFETAADLRTAVEKLDGR 163
Query: 82 EFRN----AFSRSYVRVREYDSRRSYSRSP--SRSPYYSRSRSRSPYYSRSRSPSRSWSY 135
EF+ + + + D R + SRSP R PY Y R R P R Y
Sbjct: 164 EFKGSRVICVADTQPDMPPRDLRGARSRSPGGGRRPYPPPVDD----YDR-RGPPR--GY 216
Query: 136 SPRSRSYSPRGKYSRRSP 153
SPR Y R Y RSP
Sbjct: 217 SPRRDGY--RDGYRERSP 232
>gi|380482542|emb|CCF41176.1| pre-mRNA splicing factor [Colletotrichum higginsianum]
Length = 312
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD
Sbjct: 105 MQITGLPTDTSWQDLKDFARQSSLDVVYSETGRD-GNGRGFVEFETAADLRTAVEKLDGR 163
Query: 82 EFRNA 86
EF+ +
Sbjct: 164 EFKGS 168
>gi|323448546|gb|EGB04443.1| hypothetical protein AURANDRAFT_32583 [Aureococcus anophagefferens]
Length = 240
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V L SWQDLKDH R+ G V + V +R G GIV++ S D+ AI L
Sbjct: 26 RVFVGNLSWQTSWQDLKDHFRQCGTVVHASVMEERPGRSKGCGIVEFESADEAALAIETL 85
Query: 79 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYY 123
E V+VRE R +P+++P R ++P +
Sbjct: 86 HDVELDG----RPVQVRE--DREDRDLAPAKAPGGKRPAVQAPAW 124
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKL 78
RV V L SWQDLKDH R+ G V ++V +R G + GIV++ + ++ AI +L
Sbjct: 159 RVYVGNLAWGTSWQDLKDHFRQCGSVVHAKVMEERPGRSKGWGIVEFEAPEEAVAAIEQL 218
Query: 79 DRSEF 83
+ S+
Sbjct: 219 NDSDL 223
>gi|449547249|gb|EMD38217.1| hypothetical protein CERSUDRAFT_82463 [Ceriporiopsis
subvermispora B]
Length = 224
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR++V+G+ SWQDLKD R AG V ++ + RD G G+++Y S +D + A+++LD
Sbjct: 34 YRLIVSGISRDTSWQDLKDFGREAGSVSYADIDRDVPG-EGVLEYLSREDAERAVKELDG 92
Query: 81 SEFR 84
+ R
Sbjct: 93 RDLR 96
>gi|401406638|ref|XP_003882768.1| putative Gbp1p protein [Neospora caninum Liverpool]
gi|325117184|emb|CBZ52736.1| putative Gbp1p protein [Neospora caninum Liverpool]
Length = 294
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
RV V L WQ LKDHM++AG+V + VF D G GIV+YT+ +D + AI++L
Sbjct: 24 RVYVGNLSWKVRWQHLKDHMKQAGEVLRADVFEDFQGRSKGCGIVEYTNVEDAQKAIKEL 83
Query: 79 DRSEFRNAFSRSYVRVRE 96
+E F R + VRE
Sbjct: 84 TDTEL---FDR-LIFVRE 97
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF 53
+V V+ LP SWQDLKD R GDV + V
Sbjct: 217 QVFVSNLPWRTSWQDLKDLFRECGDVVRADVM 248
>gi|299115572|emb|CBN75775.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 555
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMR-RAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAI 75
+ RV V L +WQDLKDHMR G+V + V D+GG GIV+Y + AI
Sbjct: 150 NARVYVGNLAWDVAWQDLKDHMRGLGGEVIRADVMTDQGGRSRGCGIVEYAEPEQATQAI 209
Query: 76 RKLDRSEFRN 85
+L+ SE +N
Sbjct: 210 EQLNNSELKN 219
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDD 70
GV RV V L WQDLKDHMR AG+V + V RD G GIV+Y + +
Sbjct: 42 GVMTTGITRVYVGNLSWETEWQDLKDHMRTAGEVVRADVMRDASGRSKGCGIVEYRTPAE 101
Query: 71 MKYAIRKLDRSEFR 84
+ AI L +E +
Sbjct: 102 AQEAINTLLDTELK 115
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
R+ V L + WQ+LKDHMR G V + V +D G GIV+Y AIR+L
Sbjct: 315 RIYVGNLAWTVEWQELKDHMRTVGKVVHADVLQDGDGRSKGCGIVEYEDIRGANRAIREL 374
Query: 79 DRSEF 83
+ +
Sbjct: 375 NNTAL 379
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 25 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRD---RGGMTGIVDYTSYDDMKYAIRKLDRS 81
V L +W DLKDH R AG+V + V D R G V + + ++ + AI++L+ +
Sbjct: 430 VGNLSFETTWADLKDHFRTAGEVERADVMMDGSRRSKGWGTVRFRTQEEAQSAIQELNGT 489
Query: 82 EF 83
E
Sbjct: 490 EL 491
>gi|396459915|ref|XP_003834570.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
gi|312211119|emb|CBX91205.1| hypothetical protein LEMA_P062390.1 [Leptosphaeria maculans JN3]
Length = 493
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 18/79 (22%)
Query: 25 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGI-----------------VDYT 66
+T LP SWQDLKD R++G DV +S+V R+R G + V+Y
Sbjct: 236 ITSLPVETSWQDLKDFARQSGLDVVYSEVGRERDGTGSVLYMSALARPRLTCACRFVEYE 295
Query: 67 SYDDMKYAIRKLDRSEFRN 85
+ D+K A+ KLDR EF+
Sbjct: 296 TAADLKAAVEKLDRREFKG 314
>gi|66362402|ref|XP_628165.1| Gbp1/Gbp2p-like single stranded G-strand telomeric DNA-binding
protein [Cryptosporidium parvum Iowa
gi|67605728|ref|XP_666700.1| single-stranded G-strand telomeric DNA-binding protein
[Cryptosporidium hominis TU502]
gi|28395327|gb|AAO39067.1| putative single stranded G-strand telomeric DNA-binding protein
[Cryptosporidium parvum]
gi|46227370|gb|EAK88305.1| Gbp1/Gbp2p-like, putative single stranded G-strand telomeric
DNA-binding protein [Cryptosporidium parvum Iowa II]
gi|54657743|gb|EAL36470.1| single-stranded G-strand telomeric DNA-binding protein
[Cryptosporidium hominis]
gi|323508647|dbj|BAJ77217.1| cgd1_3530 [Cryptosporidium parvum]
Length = 198
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIR 76
+ RV V LP A W DLKDHMR+AG+V + VF D G G+V+Y+ ++ + AI
Sbjct: 6 NCRVYVGNLPWKAKWHDLKDHMRQAGNVIRADVFEDEVGRSRGCGVVEYSFPEEAQRAIN 65
Query: 77 KLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSR---SPYYSRSRSRSP 121
+L+ + + +VR D Y R ++ Y R+R+ +P
Sbjct: 66 ELNNTTLLDRL--IFVREDREDESSRYGRRSNKWNNRGYGMRTRTHAP 111
>gi|327284522|ref|XP_003226986.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 195
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
++YR++ L +WQDLKD+M +AG+V ++ R G++++ SY DMK A+
Sbjct: 100 HTEYRLIDENLTGCCNWQDLKDYMHQAGEVTYADAHNGRKN-EGVIEFKSYSDMKRALEN 158
Query: 78 LDRSEFR 84
LD +E
Sbjct: 159 LDGTEVN 165
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRA-GDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
+ S++RVL+ GLP +ASWQD+KD + DV F+ V RD GM ++ + +DM +A
Sbjct: 89 GKHSEFRVLIKGLPRTASWQDVKDFFKDERLDVVFTDVNRDGVGMA---EFGNQEDMNFA 145
Query: 75 IRKLD 79
+ K++
Sbjct: 146 LDKMN 150
>gi|237832129|ref|XP_002365362.1| Gbp1p protein, putative [Toxoplasma gondii ME49]
gi|211963026|gb|EEA98221.1| Gbp1p protein, putative [Toxoplasma gondii ME49]
gi|221486778|gb|EEE25024.1| gbp1p protein, putative [Toxoplasma gondii GT1]
gi|221506480|gb|EEE32097.1| gbp1p protein, putative [Toxoplasma gondii VEG]
Length = 293
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
RV V L WQ LKDHM++AG+V + VF D G GIV+YT+ +D + AI++L
Sbjct: 23 RVYVGNLSWKVRWQHLKDHMKQAGEVLRADVFEDFQGRSKGCGIVEYTNVEDAQKAIKEL 82
Query: 79 DRSEFRNAFSRSYVRVRE 96
+E F R + VRE
Sbjct: 83 TDTEL---FDR-LIFVRE 96
>gi|402586916|gb|EJW80852.1| hypothetical protein WUBG_08240, partial [Wuchereria bancrofti]
Length = 246
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G +++ YR++V L S SWQDLKD MR AG+V F+ + GIV + + DD++
Sbjct: 58 GPPQQTRYRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHPN-EGIVCFLTRDDLER 116
Query: 74 AIRKLDRSEF 83
A+ KL E
Sbjct: 117 ALDKLQGKEV 126
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+RV+V+G+ SWQDLKD R AG V ++ + RD G GI++Y S +D + A++ LD
Sbjct: 95 FRVIVSGISRDTSWQDLKDFGREAGSVSYADIDRDNPG-EGILEYLSREDSERAVKDLDG 153
Query: 81 SEFR 84
+ R
Sbjct: 154 RDLR 157
>gi|146414105|ref|XP_001483023.1| hypothetical protein PGUG_04978 [Meyerozyma guilliermondii ATCC
6260]
Length = 251
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDV--CFSQVFRD--RGGMTGIVDYTSYDDMKY 73
R +RV VT LP +WQD KD +R ++ F++VFRD G + G +++ S +++
Sbjct: 45 RGQFRVKVTNLPDGTAWQDFKDFVRDKTELTPTFAKVFRDYESGEVIGALEFGSREELDK 104
Query: 74 AIRKLDRSEFRNAFSRSYVRVREYD 98
A+ LD++EF++ V V E D
Sbjct: 105 AVPLLDKAEFQDV-----VLVAEED 124
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
R++V+G+ SWQDLKD R AG+V ++ + RD G GI++Y + +D A+R+LD
Sbjct: 96 RLIVSGVSRDTSWQDLKDFGREAGNVSYADIDRDHPG-EGILEYLTREDADRAVRELDGK 154
Query: 82 EFR 84
+ R
Sbjct: 155 DLR 157
>gi|358387407|gb|EHK25002.1| hypothetical protein TRIVIDRAFT_145450 [Trichoderma virens Gv29-8]
Length = 311
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD
Sbjct: 101 MQITGLPNDTSWQDLKDFARQSSLDVVYSETGRDSNG-RGFVEFETAADLRTAVEKLDGR 159
Query: 82 EFRNAFSRSYV 92
EF+ + + V
Sbjct: 160 EFKGSRVQCLV 170
>gi|209882353|ref|XP_002142613.1| RNA recognition domain-containing protein [Cryptosporidium muris
RN66]
gi|209558219|gb|EEA08264.1| RNA recognition domain-containing protein [Cryptosporidium muris
RN66]
Length = 199
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 24/127 (18%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V LP A W DLKDHMR+AG V + VF D G G+V+Y++ ++ + AI +L
Sbjct: 8 RVYVGNLPWKAKWHDLKDHMRQAGSVVRADVFEDEVGRSRGCGVVEYSAPEEAQRAIAEL 67
Query: 79 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSPR 138
+ S + + VRE D +R +S + +R +S R
Sbjct: 68 NNSTILDRL----IFVRE-DREEETNRFGRKSGKWGHNR----------------GHSSR 106
Query: 139 SRSYSPR 145
+R+++PR
Sbjct: 107 TRTHAPR 113
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
R++V+G+ SWQDLKD R AG V F+ + RD G G+++Y + +D + A++ LD
Sbjct: 94 IRIIVSGISRDTSWQDLKDFGREAGSVSFADIERDVPGQ-GVLEYLAREDAERAVKDLDG 152
Query: 81 SEFR 84
+ R
Sbjct: 153 KDLR 156
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
R++VTG+ SWQDLKD R AG V F+ + R+ G G+++Y + +D A+R+LD
Sbjct: 98 RLVVTGVSRDTSWQDLKDFGRDAGSVSFADIDRESPGQ-GVLEYLNREDADRAVRELDGK 156
Query: 82 EFR 84
E R
Sbjct: 157 ELR 159
>gi|393912529|gb|EFO18201.2| Sfrs5 protein [Loa loa]
Length = 287
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G +++ YR++V L S SWQDLKD MR AG+V F+ + GIV + + DD++
Sbjct: 100 GPPQQTRYRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHPN-EGIVCFLTRDDLER 158
Query: 74 AIRKLDRSEF 83
A+ KL E
Sbjct: 159 ALDKLQGKEV 168
>gi|254565999|ref|XP_002490110.1| Poly(A+) RNA-binding protein, involved in the export of mRNAs from
the nucleus to the cytoplasm [Komagataella pastoris
GS115]
gi|238029906|emb|CAY67829.1| Poly(A+) RNA-binding protein, involved in the export of mRNAs from
the nucleus to the cytoplasm [Komagataella pastoris
GS115]
Length = 445
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG---GMTGIVDYTSYDDMKYAIRKLD 79
V + LP SWQ LKDH G+V + + +RG GM G V++ + +D+K AI KLD
Sbjct: 119 VFIGNLPFQCSWQQLKDHFSSIGEVHRADIVTERGRSRGM-GTVEFVNEEDVKLAIEKLD 177
Query: 80 RSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWS 134
+ F + RE R+ Y + +R R +P R P R +
Sbjct: 178 HTIFLD---------REIFVRQDYPPPDKNRVFETRPRRDTPENRDYREPPRDGT 223
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 3 RYSSYSSGGSR--GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
R+S YS GS G R+++R++V L S SWQDLKD MR+AG+V + R+
Sbjct: 84 RFSYYSQSGSSRYGPPVRTEHRIIVENLSSRISWQDLKDVMRKAGEVTYVDAHRNNRN-E 142
Query: 61 GIVDYTSYDDMK 72
G+V++ SY D++
Sbjct: 143 GVVEFASYSDIE 154
>gi|393216709|gb|EJD02199.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 270
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
R+ V + SWQDLKD R AG V F+ + R+ G GI++Y S DD + A+++LD
Sbjct: 95 IRISVDNISKDTSWQDLKDFGREAGSVSFADIDREVPG-RGILEYASRDDAEQAVKELDG 153
Query: 81 SEFR 84
E R
Sbjct: 154 KELR 157
>gi|324517555|gb|ADY46854.1| Serine/arginine-rich splicing factor 6 [Ascaris suum]
Length = 266
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 14 GVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
G +++ +R++V L S SWQDLKD MR AG+V F+ + G+V + S +D++
Sbjct: 90 GPPQQTRHRLIVENLSSRCSWQDLKDIMRTAGEVTFADAHKQHAN-EGVVCFQSREDLER 148
Query: 74 AIRKLDRSEF 83
A+ KL E
Sbjct: 149 ALDKLQGKEV 158
>gi|340939264|gb|EGS19886.1| splicing factor srp2-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 307
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 39/142 (27%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
+ +TGLP SWQ AG DV +++ R GIV++ + DM+ AI KLD
Sbjct: 106 MEITGLPDGCSWQ--------AGVDVVYTETSRRGNSWEGIVEFETPADMRTAIEKLDGR 157
Query: 82 EFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPY----------YSRSRSPSR 131
EF+N S + PS P Y R RSRSP Y R P R
Sbjct: 158 EFKN----------------SRTAQPSEPPRYDRGRSRSPIRRYPPPPLDDYDRRGPPPR 201
Query: 132 SWSYSPRSRSYSPRGKYSRRSP 153
YSPR Y R Y R+P
Sbjct: 202 --GYSPRRDGY--RDAYRERTP 219
>gi|115396156|ref|XP_001213717.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193286|gb|EAU34986.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 189
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
Query: 35 QDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNAFSRSYVR 93
QDLKD R++G DV +S+ R+ G G V++ + +D+K A+ KLD EF+ +
Sbjct: 9 QDLKDFARQSGLDVVYSETGREIG--RGFVEFETANDLKTAVEKLDGREFKGSRVSCIAD 66
Query: 94 VREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS-PRSRSYSPRGKYSRRS 152
++ YD R SR PY RSRSP RS P + P R YSPR Y RS
Sbjct: 67 IQAYDDRF------SRDPY----RSRSP--RRSYPPIDEYDRRFPPPRGYSPRAHYRERS 114
Query: 153 P 153
P
Sbjct: 115 P 115
>gi|429859457|gb|ELA34237.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 328
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 25 VTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+TGLP+ SWQDLKD R++ DV +S+ RD G G V++ + D++ A+ KLD EF
Sbjct: 113 ITGLPTDTSWQDLKDFARQSSLDVVYSETGRDGNG-RGFVEFETAADLRTAVEKLDGREF 171
Query: 84 R 84
+
Sbjct: 172 K 172
>gi|156396829|ref|XP_001637595.1| predicted protein [Nematostella vectensis]
gi|156224708|gb|EDO45532.1| predicted protein [Nematostella vectensis]
Length = 548
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRR-AGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAI 75
+ +V V+ +P + WQ+LKDHM + GDV F+++F D G G+V++TS + + I
Sbjct: 92 EKKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSKGCGVVEFTSSESAERCI 151
Query: 76 RKLDRSEF--RNAFSR 89
+ +F RN R
Sbjct: 152 SLCNGQDFNGRNLLVR 167
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
+V V LP +WQDLKD R AG V + + + G GIV + + ++ + AI
Sbjct: 471 QVFVRNLPWKYTWQDLKDKFRPAGKVMRADILTEPSGRSKGCGIVVFETQEEAQMAISAF 530
Query: 79 DRSEF 83
+ + F
Sbjct: 531 NGASF 535
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR+ YR+ V L S ASWQDLKD+ R GD+ ++ + R G+V++ M+ A+
Sbjct: 111 RRTQYRIRVENLSSRASWQDLKDYFRSCGDITYTNAHKPRNN-EGVVEFGDKRAMENALD 169
Query: 77 KLDRSEF 83
+LD +E
Sbjct: 170 RLDDTEL 176
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 4 YSSYSSGGSRGVSRR---SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT 60
Y + GG G R R++V+G+ SWQDLKD R AG V F+ + RD G
Sbjct: 81 YDNDRGGGGHGAPRSRRPPGIRLIVSGVSRDTSWQDLKDFGRDAGSVSFADIDRDVPGQ- 139
Query: 61 GIVDYTSYDDMKYAIRKLDRSEFR 84
G+++Y S +D A+++LD + R
Sbjct: 140 GVLEYLSREDADRAVKELDGKDLR 163
>gi|124802073|ref|XP_001347353.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23494932|gb|AAN35266.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 246
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V LP +W LK+HM++AGDV +F D G GIV+Y +Y++ + AI L
Sbjct: 13 RVYVGNLPWKVTWPILKNHMKKAGDVVRVDIFEDTQGRSKGCGIVEYATYEEAQEAISSL 72
Query: 79 DRSEFRN 85
+ S+ +
Sbjct: 73 NDSKLED 79
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG 58
SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++ G
Sbjct: 104 SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKNGTG 146
>gi|344249201|gb|EGW05305.1| Splicing factor, arginine/serine-rich 9 [Cricetulus griseus]
Length = 91
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRV 94
MR AGDVC++ V +D GM G+V+Y +DM+YA+RKLD ++FR + SY+RV
Sbjct: 1 MREAGDVCYADVQKD--GM-GMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRV 52
>gi|156096683|ref|XP_001614375.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148803249|gb|EDL44648.1| RNA binding protein, putative [Plasmodium vivax]
Length = 250
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V LP +W LK HM++AGDV +F D G GIV+Y +Y++ + AI L
Sbjct: 22 RVYVGNLPWKVTWPVLKTHMKKAGDVVRVDIFEDTQGRSKGCGIVEYATYEEAQEAINSL 81
Query: 79 DRSEFRN 85
+ S+ +
Sbjct: 82 NDSKLED 88
>gi|389583265|dbj|GAB66000.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 241
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V LP +W LK HM++AGDV +F D G GIV+Y +Y++ + AI L
Sbjct: 14 RVYVGNLPWKVTWPVLKTHMKKAGDVVRVDIFEDTQGRSKGCGIVEYATYEEAQEAINSL 73
Query: 79 DRSEFRN 85
+ S+ +
Sbjct: 74 NDSKLED 80
>gi|70947849|ref|XP_743501.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56523027|emb|CAH75823.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 283
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD 55
SRR Y V V+GLP S SWQDLKDH+R AG+ + VF++
Sbjct: 104 SRRGRYVVEVSGLPLSGSWQDLKDHLREAGECGHADVFKN 143
>gi|403338343|gb|EJY68407.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 371
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRK 77
Y+V VT L + W+ LKDHM++ G V + +F D G TG+V++ + +D AIR+
Sbjct: 134 YKVYVTNLAFATDWRSLKDHMKKCGFVVRADIFEDDKGRSKGTGVVEFRNQNDAIRAIRE 193
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPS 108
++ ++ V V+EY + S SR+
Sbjct: 194 VNSTQ----LDGRTVYVKEYHEQGSRSRAQQ 220
>gi|427793957|gb|JAA62430.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 390
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 31 SASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
S QDLKD MR+ GDV ++ R R G+V++ SY DMK AI KLD +E
Sbjct: 16 SLPHQDLKDRMRQVGDVTYADAHRHRRN-EGVVEFASYSDMKRAIEKLDNTEI 67
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++ R++V L S SWQDLKD MR+AG+V F+ R + G+V++ SY D+K A+ K
Sbjct: 117 RTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYSDLKNALEK 175
Query: 78 LDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYSP 137
L E R + R S SRS S S SRSRSR+ SRSR+P RS S+SP
Sbjct: 176 LSGKEIN---GRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSHSP 232
Query: 138 RSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPP 171
+SR SP+ Y+R A + + GSPP
Sbjct: 233 KSR--SPKRDYNRSHSRSHSGSPAPRGAAPGSPP 264
>gi|299753075|ref|XP_001833047.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
gi|298410132|gb|EAU88736.2| hypothetical protein CC1G_01109 [Coprinopsis cinerea okayama7#130]
Length = 279
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
R++V+G+ SWQDLKD R V F+ + RD G G+++Y S +D A++ LD
Sbjct: 91 RLIVSGISRDTSWQDLKDFGREVASVSFADIDRDVPGQ-GVLEYLSREDADRAVKDLDGR 149
Query: 82 EFRNAFSRSYV 92
E R R +
Sbjct: 150 ELRGKLVRVVL 160
>gi|157125001|ref|XP_001654204.1| splicing factor pTSR1, putative [Aedes aegypti]
gi|108882733|gb|EAT46958.1| AAEL001889-PA [Aedes aegypti]
Length = 208
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
+R+ +R++V L S W+DLK HMR ++ F+ RDR G+V++ S DMK ++
Sbjct: 52 QRTYHRLIVENLSSRIDWRDLKAHMR---NITFADAHRDRMN-EGVVEFASRYDMKRVLK 107
Query: 77 KLDRSEFRNAFSRSY 91
D +E + R Y
Sbjct: 108 MFDDTELNGTYIRLY 122
>gi|83317885|ref|XP_731355.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491371|gb|EAA22920.1| Gbp1p protein-related [Plasmodium yoelii yoelii]
Length = 233
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V LP +W LK+HM++AGDV +F D G GIV+Y+S ++ + AI +L
Sbjct: 13 RVYVGNLPWKVTWPILKEHMKKAGDVLRVDIFEDTQGRSKGCGIVEYSSCEEAQEAINRL 72
Query: 79 DRSEFRN 85
+ S+ +
Sbjct: 73 NDSKLED 79
>gi|225709420|gb|ACO10556.1| Serine-arginine protein 55 [Caligus rogercresseyi]
Length = 244
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
+++YRV+V L S SWQDLKD+ R AGD+ ++ R G GIV++ S + YA+
Sbjct: 109 KTNYRVVVENLSSRTSWQDLKDYFRAAGDITYTNAHTPRQG-EGIVEFASSKGLDYALDH 167
Query: 78 LDRSEF 83
+ E
Sbjct: 168 QNELEL 173
>gi|68067995|ref|XP_675916.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495364|emb|CAH97030.1| conserved hypothetical protein [Plasmodium berghei]
Length = 227
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V LP +W LKDHM++ GDV +F D G GIV+Y+S ++ + AI +L
Sbjct: 7 RVYVGNLPWKVTWPVLKDHMKKVGDVLRVDIFEDTQGRSKGCGIVEYSSCEEAQEAINRL 66
Query: 79 DRSEFRN 85
+ S+ +
Sbjct: 67 NDSKLED 73
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
+ +RV ++ +P S SWQDLKD +R G V + V DR G G+ +T+ +M+ AIRKL
Sbjct: 117 TQFRVELSNIPRSVSWQDLKDFLRIGGVVVHADV--DRRG-NGVASFTNQQEMERAIRKL 173
>gi|405963003|gb|EKC28616.1| Splicing factor, arginine/serine-rich 4 [Crassostrea gigas]
Length = 553
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 32/97 (32%)
Query: 18 RSDYRVLVTGLPSSASWQ-------------------------------DLKDHMRRAGD 46
R++YR++V L S SWQ DLKD+MR+AG+
Sbjct: 346 RTEYRLIVENLSSRVSWQVSWFHCEDELGNHATTLTVGGAFRVQSTAVEDLKDYMRQAGE 405
Query: 47 VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
V ++ ++ GIV++ SY DMK A+ KLD +E
Sbjct: 406 VTYADAHKEHKN-EGIVEFASYSDMKNAVSKLDGTEI 441
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R++YR+ V L S SWQDLKD+ R AG++ ++ R G G+V++ S + YAI
Sbjct: 117 RTNYRITVQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQG-EGVVEFASSRGLDYAIDH 175
Query: 78 LDRSEF 83
D E
Sbjct: 176 QDELEL 181
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL 78
+ +RV ++ +P S SWQDLKD +R G V + V DR G G+ +T+ +M+ AIRKL
Sbjct: 117 TQFRVELSNIPRSVSWQDLKDFLRIGGVVVHADV--DRRG-NGVASFTNQQEMERAIRKL 173
>gi|390457607|ref|XP_003731973.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1-like [Callithrix jacchus]
Length = 373
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 15 VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYA 74
++R S RV+V+ LP S Q+LK HM G V +++V+++ +G+++ +DM +
Sbjct: 116 LTRWSXNRVVVSWLPPDGSXQELKXHMHETGGVYYAEVYQNG---SGVMEDVKKEDMNFL 172
Query: 75 IRKLDRSEFR 84
RKLD ++FR
Sbjct: 173 ARKLDNTKFR 182
>gi|70943756|ref|XP_741887.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520548|emb|CAH80503.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 562
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 6 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT----G 61
+YS + +++ R++V + SWQDLKD R G V ++ V + G G
Sbjct: 243 NYSDNKFESIEKKNSLRIVVKNIDEKVSWQDLKDFGREVGSVNYANVIYNNNGNNKEWYG 302
Query: 62 IVDYTSYDDMKYAIRKLDRSEF 83
I++Y +Y+ MK A+ L+ +F
Sbjct: 303 IIEYYNYETMKRAVEVLNGKKF 324
>gi|259481715|tpe|CBF75495.1| TPA: RNP domain protein (AFU_orthologue; AFUA_6G12300) [Aspergillus
nidulans FGSC A4]
Length = 484
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 16 SRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMK 72
S + D RV V L W LKD MR+AGDV F+ V GM+ GIV+Y + + +
Sbjct: 106 SSQQDRRVYVGNLSYDVKWHHLKDFMRQAGDVIFADVLLLPNGMSKGCGIVEYATREQAQ 165
Query: 73 YAIRKLDRSEFRNAFSRSYVRVRE 96
A+ L N V VRE
Sbjct: 166 NAVNTLSNQNLMNRL----VYVRE 185
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRA---GDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAI 75
++ V+ LP + WQDLKD R+A G V + V D G +GIV + S DD + AI
Sbjct: 223 QLYVSNLPFNVGWQDLKDLFRQAAQQGTVIRADVHTDASGRPKGSGIVAFESPDDARNAI 282
Query: 76 RKLD 79
++ +
Sbjct: 283 QQFN 286
>gi|403224331|dbj|BAM42461.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 182
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRKL 78
RV V L WQDLKDHM++ GDV + + DR G GIV++ + + AI +L
Sbjct: 8 RVYVGNLSWKVKWQDLKDHMKQVGDVVRADIIEDRDGKSKGCGIVEFANEESAVRAISEL 67
Query: 79 DRSEF--RNAFSR----SYVRVREYDS-RRSYSRSP 107
+ + R F R +Y R Y+ +R YS SP
Sbjct: 68 NDTSILDRQIFVREDRENYTPFRGYNRYQRGYSDSP 103
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 3 RYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 55
R ++ GG R S R + +R+++ L + SWQD+KDH+R+ G + +S+ +
Sbjct: 88 REPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHK- 146
Query: 56 RGGMTGIVDYTSYDDMKYAIRKL 78
R IV +TS+DD++ A+ KL
Sbjct: 147 RNVNQAIVCFTSHDDLRDAMNKL 169
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+R +V+ LP + SWQDLKD R G V F+ V R G+++Y + DD + A+ K++
Sbjct: 122 FRCIVSNLPPNTSWQDLKDIGREHGSVSFADVDAARPD-EGVIEYDNRDDYERALDKIEG 180
Query: 81 SEFR 84
+E R
Sbjct: 181 TELR 184
>gi|298713553|emb|CBJ27081.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
+V V L WQDLKDHMR AG V F +F++ GG +V+Y + + AIR L
Sbjct: 263 KVYVGNLSWECQWQDLKDHMRAAGSVKFVDLFQEPGGRSKGCAVVEYETPQEAHSAIRDL 322
Query: 79 DRSEF 83
+E
Sbjct: 323 HDTEL 327
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 19 SDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVF-----RDRGGMTGIVDYTSYDDMKY 73
++ +V V+ L WQDLKDHM+ AG V + VF R +G G V+++ + +
Sbjct: 168 ANCKVFVSNLAYDVQWQDLKDHMKNAGSVIRADVFVGPDGRSKG--LGTVEFSKPYEARN 225
Query: 74 AIRKLDRSEF 83
AI +L +E
Sbjct: 226 AISQLSETEL 235
>gi|388578968|gb|EIM19299.1| hypothetical protein WALSEDRAFT_66518 [Wallemia sebi CBS 633.66]
Length = 305
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 12 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 71
RG Y+V V G+ SWQDLKD R G V + V RD G GI++Y S D
Sbjct: 159 KRGPKPNQGYKVFVQGIDRDTSWQDLKDFGRDGGPVIRADVDRDVPGQ-GIIEYPSKFDA 217
Query: 72 KYAIRKLDRSEFR 84
A+ +LD E +
Sbjct: 218 DDAVVRLDNKELK 230
>gi|50880296|emb|CAH05070.1| Hrp59 protein [Chironomus tentans]
Length = 525
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 10 GGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYD 69
GGS ++ +LV LPSS +WQ+L+D R G+V F+++ RG TG+V ++
Sbjct: 445 GGSSSSRKQQSDTILVRNLPSSWTWQNLRDKFRDVGEVKFAEI---RGLDTGVVRFSKER 501
Query: 70 DMKYAIRKLDRSEF 83
+ AI+ LD S F
Sbjct: 502 EADVAIKLLDGSRF 515
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 22 RVLVTGLPSSASWQDLKDHMRR-AGDVCFSQVFRDRGGM---TGIVDYTSYDDMKYAIRK 77
R+ V+ + WQDLKD R+ G+V F ++F D G GI+++ S D ++ A+ K
Sbjct: 25 RIYVSNIAYEVRWQDLKDLFRKEVGEVAFVELFNDESGKPRGCGIIEFVSADSVRIALDK 84
Query: 78 LDR 80
++R
Sbjct: 85 MNR 87
>gi|164655307|ref|XP_001728784.1| hypothetical protein MGL_4119 [Malassezia globosa CBS 7966]
gi|159102668|gb|EDP41570.1| hypothetical protein MGL_4119 [Malassezia globosa CBS 7966]
Length = 389
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
YR++V LP SWQDLKD R G V FS + ++ G +++ S DD + A+ +++
Sbjct: 52 YRLIVFNLPPGTSWQDLKDVGREHGHVTFSDINPNQPD-EGALEFESRDDYERALARIEG 110
Query: 81 SEFRNAFSRS 90
++ R A R+
Sbjct: 111 TDLRGAILRA 120
>gi|443899862|dbj|GAC77190.1| alternative splicing factor SRp55/B52/SRp75 [Pseudozyma antarctica
T-34]
Length = 260
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+R +V+ LP + SWQDLKD R G + F+ V R G+++Y + DD + A+ K++
Sbjct: 119 FRCIVSNLPPNTSWQDLKDIGREHGSISFADVDPSRPD-EGVIEYDNRDDYERALDKIEG 177
Query: 81 SEFR 84
E R
Sbjct: 178 IELR 181
>gi|224009309|ref|XP_002293613.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971013|gb|EED89349.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 189
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGG---MTGIVDYTSYDDMKYAIRKL 78
RV V L S W+DLKDHM+ GDV + + + G GIV+Y+S ++ A+ +L
Sbjct: 1 RVYVGNLSWSTGWRDLKDHMKACGDVLRADIMQTHDGRSKGCGIVEYSSPEEAARAVEEL 60
Query: 79 DRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRS 132
+ SE S + VRE + + S + ++ RS + Y + SP+
Sbjct: 61 NNSE----LSGRQIFVREDREQTTGSNNRHGGGGFNNQRSHNTSYMQG-SPAEE 109
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT---GIVDYTSYDDMKYAIRKL 78
++ V L W++LKDH R+ G+V ++V G G+V + S D + AIRKL
Sbjct: 112 QLFVGNLSWETGWRELKDHFRQCGEVDRAEVAEGNDGRKRGFGLVRFHSAKDAQAAIRKL 171
Query: 79 DRSEF 83
+ +F
Sbjct: 172 NGVDF 176
>gi|428186342|gb|EKX55192.1| hypothetical protein GUITHDRAFT_160399 [Guillardia theta CCMP2712]
Length = 321
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
RV V G+ SWQDLKD R+AG+ ++ D G G+++Y + +D A R LD +
Sbjct: 69 RVYVDGIDEKTSWQDLKDFARKAGNPAYTDTVMDSKGKYGVIEYRTAEDCYSACRMLDGT 128
Query: 82 EFRNAFSRSY 91
+ R Y
Sbjct: 129 MIGSCKVRVY 138
>gi|221122641|ref|XP_002154006.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Hydra
magnipapillata]
Length = 259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+ + + V L S SWQDLKD+ R +V ++ R G+ I ++Y+DMK IRK
Sbjct: 109 RTKWMLRVENLSSRVSWQDLKDYCRPHAEVTYADAHRKERGVACIC-TSTYEDMKNLIRK 167
Query: 78 LDRSEF 83
+D +E
Sbjct: 168 IDNTEL 173
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 3 RYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 55
R ++ GG R S R + +R+++ L + SWQD+KDH+R+ G + +S+ +
Sbjct: 88 REPTFRRGGERQFSNRYSRPCSTRFRLVIDNLSTRFSWQDIKDHIRKLGIEPTYSEAHK- 146
Query: 56 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
R +V ++++DD++ A+ KL E
Sbjct: 147 RNVNQALVCFSTHDDLREAMNKLQGEEL 174
>gi|321263009|ref|XP_003196223.1| mRNA binding protein [Cryptococcus gattii WM276]
gi|317462698|gb|ADV24436.1| mRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 275
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKL--- 78
R+ V+G S+ SWQDLKD+ R G+ R G+++Y + ++ + AIR+L
Sbjct: 92 RINVSGFSSATSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRRLAGV 151
Query: 79 -------------DRSEFRNAFSRSYVRVREYDSRRS----YSRSPSRSPYY 113
+EF F R R+YD RR+ Y R P R YY
Sbjct: 152 DINGAPVTLEIAPAEAEFDRDFDRRPPPPRDYDDRRAPRDYYDRPPPRD-YY 202
>gi|242016244|ref|XP_002428739.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1,
putative [Pediculus humanus corporis]
gi|212513424|gb|EEB16001.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1,
putative [Pediculus humanus corporis]
Length = 508
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRR-AGDVCFSQVF---RDRGGMTGIVDYTSYDDMKYAI 75
D RV V+ LP WQDLKD R+ G+V F ++F D+ GIV++ + +K AI
Sbjct: 38 DCRVFVSNLPYDYRWQDLKDLFRKEIGEVAFVELFSDENDKSKGCGIVEFELPESVKKAI 97
Query: 76 RKLDR 80
KL R
Sbjct: 98 EKLHR 102
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 3 RYSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGI 62
R + SSGG + S V+V LP + +WQ+LKD R G++ F+++ RG + G+
Sbjct: 427 RNNIMSSGGPK-----SSDTVIVDNLPHNFTWQNLKDKFRDVGNIKFAEM---RGKL-GL 477
Query: 63 VDYTSYDDMKYAIRKLDRS 81
+ + S + A+ +D S
Sbjct: 478 IRFASEWEAHRAVSLMDNS 496
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR+ YR+ V L + SWQDLKD+ R G++ ++ + R G+V++ M+ A+
Sbjct: 107 RRTQYRIRVENLSTRTSWQDLKDYFRSCGEITYTNAHKPRNN-EGVVEFGDKRAMENALD 165
Query: 77 KLDRSEF 83
+LD ++
Sbjct: 166 RLDDTDL 172
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 3 RYSSYSSGGSRGVSRR------SDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRD 55
R ++ GG R S R + +R++V L + SWQD+KDH+R+ G + +S+ +
Sbjct: 88 REPTFRRGGERQFSNRYSRPCSTRFRLVVDNLSTRYSWQDIKDHIRKLGIEPTYSEAHK- 146
Query: 56 RGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
R +V ++++DD++ A+ KL E
Sbjct: 147 RNVNQALVCFSTHDDLRDAMNKLQGEEL 174
>gi|405122601|gb|AFR97367.1| mRNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 274
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
R+ V+G S+ SWQDLKD+ R G+ R G+++Y + ++ + AIR+L
Sbjct: 92 RINVSGFSSATSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRRLAGV 151
Query: 82 EFRNA------------FSRSYVR---VREYDSRRS----YSRSPSRS 110
+ A F R + R R+YD RR+ Y R P R
Sbjct: 152 DINGAPVTLEIAPAEPEFDREFDRRPPPRDYDDRRAPRDYYDRPPPRD 199
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDD 70
+++YR+ V L S SWQDLKD+ R AGD+ ++ R G G+V++ S D
Sbjct: 121 KTNYRITVQNLSSRTSWQDLKDYFRAAGDITYTNAHTPRQG-EGVVEFASSQD 172
>gi|58260304|ref|XP_567562.1| mRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134116248|ref|XP_773078.1| hypothetical protein CNBJ0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255699|gb|EAL18431.1| hypothetical protein CNBJ0730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229612|gb|AAW46045.1| mRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 274
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 22 RVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRS 81
R+ V+G S SWQDLKD+ R G+ R G+++Y + ++ + AIR+L
Sbjct: 92 RINVSGFSSETSWQDLKDYGRLGGNTIIYADVDKRNPGHGVIEYRNMEEAQEAIRRLAGV 151
Query: 82 EFRNA------------FSRSYVR---VREYDSRRS----YSRSPSRS 110
+ A F R + R R+YD RR+ Y R P R
Sbjct: 152 DINGAPVTLEIAPADPEFDREFDRRPPPRDYDDRRAPRDYYDRPPPRD 199
>gi|268575776|ref|XP_002642868.1| Hypothetical protein CBG15138 [Caenorhabditis briggsae]
Length = 339
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 30/161 (18%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQV-FR-DRGGMTGIVDYTSYDDM---KYAI 75
+ V+V LPSSASWQD+KDHMR + + V F+ DR Y ++D +YA+
Sbjct: 149 FLVIVDNLPSSASWQDVKDHMRDTHGIKSTNVDFKTDRA-------YVEFEDQRGAEYAV 201
Query: 76 RKLDRSEFRNAFSRS-YVRVR----------EYDSRRSYSRSPSRSPYYSRSRSRSPYYS 124
++ +S FR+ + Y+ VR + RS++R S SP S R
Sbjct: 202 KRYHQSLFRSHRGETRYINVRLGTPNPHKFADNIKNRSFTRQRSMSPIRRSSGGRDLKRV 261
Query: 125 RSRSPSRSWSYS-PRSRSYSPRGKYSRRSPSL--SPARSAS 162
R RS S PR + SP RR PSL SP R +S
Sbjct: 262 AFRDERRSVSCKRPREHNRSP----IRRRPSLEDSPIRRSS 298
>gi|343426008|emb|CBQ69540.1| related to pre-mrna splicing factor srp55 [Sporisorium reilianum
SRZ2]
Length = 248
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDR 80
+R +++ LP + SWQDLKD R G + F+ V + G ++Y + DD + A+ K++
Sbjct: 120 FRCVISNLPPNTSWQDLKDIGREHGSISFADVDPNNPD-EGFIEYDNRDDYERALDKIEG 178
Query: 81 SEFR 84
E R
Sbjct: 179 IELR 182
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 23/77 (29%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMT-----------GIVDYT 66
R+++R++V L S SWQDLKD MR+ G +T G++++
Sbjct: 108 RTEHRLIVENLSSRCSWQDLKDFMRQ------------AGEVTYADAHKERTNEGVIEFR 155
Query: 67 SYDDMKYAIRKLDRSEF 83
SY DMK A+ KLD +E
Sbjct: 156 SYSDMKRALDKLDGTEI 172
>gi|256077396|ref|XP_002574991.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229593|emb|CCD75764.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 283
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 35 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+DLKD MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 34 EDLKDLMRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFDGYEL 81
>gi|443926862|gb|ELU45418.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 362
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 35 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFRNA 86
QDLKD R AG V F+ V RD TGI++Y S D + A+R LD + R A
Sbjct: 208 QDLKDFAREAGSVSFADVDRDSPN-TGIIEYVSQSDAENAVRTLDGRDLRGA 258
>gi|62089194|dbj|BAD93041.1| CS0DF038YO05 variant [Homo sapiens]
Length = 326
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 25 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+ L + +DLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 166 LLCLTQLSCVKDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 223
>gi|444319050|ref|XP_004180182.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
gi|387513224|emb|CCH60663.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
Length = 420
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQV-FRDRGGMTGIVDYTSYDDMKYAIRKL 78
YR+ + LP +SWQDLKD R + FS V RD G TG +++ S + M + KL
Sbjct: 182 YRITLRNLPEGSSWQDLKDLARENSLETTFSSVNTRDFDG-TGALEFPSEEAMNDGLEKL 240
Query: 79 DRSEFR 84
+ E+R
Sbjct: 241 NNIEYR 246
>gi|90081130|dbj|BAE90045.1| unnamed protein product [Macaca fascicularis]
Length = 189
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 25 VTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR 84
+ L + +DLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 29 LLCLTQLSCVKDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEIN 87
>gi|148670739|gb|EDL02686.1| mCG7614, isoform CRA_b [Mus musculus]
gi|148670744|gb|EDL02691.1| mCG7614, isoform CRA_b [Mus musculus]
Length = 151
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 34 WQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
+DLKD MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 3 IKDLKDFMRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 51
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 48 CFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEFR-NAFSRSYVRVR 95
C++ VFRD TG+V++ +DM YA+RKLD ++FR + +Y+RV+
Sbjct: 114 CYADVFRD---GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 159
>gi|374107494|gb|AEY96402.1| FADR183Cp [Ashbya gossypii FDAG1]
Length = 320
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+R+ + LP +WQ+LKD R + FS V TG ++++S + ++ A+ KL+
Sbjct: 112 FRIKIRNLPEGIAWQELKDLARENNLETTFSSVDTSNFDGTGALEFSSEEILEEALEKLN 171
Query: 80 RSEFR 84
EFR
Sbjct: 172 NYEFR 176
>gi|440471047|gb|ELQ40084.1| hypothetical protein OOU_Y34scaffold00462g38 [Magnaporthe oryzae
Y34]
Length = 905
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 17 RRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIR 76
RR+ +R+ ++GLP SWQ DV +S+ R+ G G V++ + D+ A+
Sbjct: 694 RRTAFRMQISGLPVDTSWQ---------LDVVYSETGRNNNG-EGFVEFETAADLASAVE 743
Query: 77 KLDRSEFRNAFSRS 90
LD EF++ R
Sbjct: 744 ALDGKEFKDKIVRC 757
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 37 LKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
L D+MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 90 LSDYMRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 135
>gi|384500606|gb|EIE91097.1| hypothetical protein RO3G_15808 [Rhizopus delemar RA 99-880]
Length = 163
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V F+ + RDR GIV++ +DM+YA+RKL+ E
Sbjct: 2 MRKAGEVTFADISRDR-PTEGIVEFHVREDMEYALRKLNDREL 43
>gi|391343504|ref|XP_003746049.1| PREDICTED: serine-arginine protein 55-like [Metaseiulus
occidentalis]
Length = 296
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 20 DYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDR-GGMTGIVDYTSYDDMKYAIRKL 78
+Y+++V L S SW+D KD +RR D+ V + GIV + ++ D+K AI+K
Sbjct: 99 EYQIVVENLSSRISWKDFKDMIRRE-DIEVVHVDAHKLHKHQGIVKFRTHSDLKRAIKKF 157
Query: 79 DRSEF 83
E
Sbjct: 158 QNREI 162
>gi|344245044|gb|EGW01148.1| Splicing factor, arginine/serine-rich 4 [Cricetulus griseus]
Length = 368
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + R G++++ SY DMK A+ KLD +E
Sbjct: 1 MRQAGEVTYADAHKGRKN-EGVIEFVSYSDMKRALEKLDGTEV 42
>gi|391339441|ref|XP_003744058.1| PREDICTED: uncharacterized protein LOC100905097 [Metaseiulus
occidentalis]
Length = 355
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 12 SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDM 71
+RG RR+DY++ + L + SWQDLKD V ++ R GIV++ + ++M
Sbjct: 97 TRGPPRRTDYQISIKNLSTRVSWQDLKDIFGEVAKVVYADAHNKRRNY-GIVEFDTKEEM 155
Query: 72 KYAIRKLDRSEF 83
K + F
Sbjct: 156 NRCYEKFNGKSF 167
>gi|157930920|gb|ABW04629.1| splicing factor arginine/serine-rich 4 [Haliotis diversicolor
supertexta]
Length = 159
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V F+ + + GIV++ +Y DMK A+ KLD +E
Sbjct: 1 MRQAGEVTFADAHK-KHKNEGIVEFATYSDMKNAMEKLDNTEI 42
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+ + + V L S SW DLKD MR+AG+V ++ + G G V + + +D++ A +K
Sbjct: 107 RTRFTLEVENLSSRVSWADLKDMMRKAGEVTYTDAHQRMGKNRGEVCFANSEDLRAAYKK 166
Query: 78 LD 79
D
Sbjct: 167 FD 168
>gi|82595824|ref|XP_726007.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481235|gb|EAA17572.1| similar to splicing factor, arginine/serine-rich 4, putative
[Plasmodium yoelii yoelii]
Length = 715
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 6 SYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDRGGMTG 61
+YS + +++ R++V + SWQDLKD R G + G
Sbjct: 363 NYSDNKFESIEKKNSLRIVVKNIDEKVSWQDLKDFGREVGLVNYANVVYNNNGNNKEYYG 422
Query: 62 IVDYTSYDDMKYAIRKLDRSEF 83
I++Y +Y+ MK AI L+ +F
Sbjct: 423 IIEYYNYETMKRAIDVLNGKKF 444
>gi|347972227|ref|XP_003436862.1| AGAP004592-PI [Anopheles gambiae str. PEST]
gi|333469352|gb|EGK97263.1| AGAP004592-PI [Anopheles gambiae str. PEST]
Length = 214
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + R G+V++ + DMK AI KLD +E
Sbjct: 1 MRQAGEVTYADAHKQRKN-EGVVEFATLSDMKTAIEKLDDTEL 42
>gi|17861940|gb|AAL39447.1| HL03687p [Drosophila melanogaster]
gi|25010013|gb|AAN71172.1| GH12433p [Drosophila melanogaster]
gi|25012830|gb|AAN71505.1| RH01580p [Drosophila melanogaster]
gi|28416383|gb|AAO42664.1| GH08123p [Drosophila melanogaster]
Length = 216
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 1 MRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 42
>gi|195500861|ref|XP_002097555.1| GE26286 [Drosophila yakuba]
gi|194183656|gb|EDW97267.1| GE26286 [Drosophila yakuba]
Length = 218
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 1 MRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 42
>gi|194901398|ref|XP_001980239.1| GG19774 [Drosophila erecta]
gi|190651942|gb|EDV49197.1| GG19774 [Drosophila erecta]
Length = 217
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 1 MRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 42
>gi|388260157|ref|YP_006347685.1| hypothetical protein [European catfish virus]
gi|387119516|gb|AFJ52377.1| hypothetical protein [European catfish virus]
Length = 758
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 77/139 (55%), Gaps = 15/139 (10%)
Query: 53 FRDRGGMTGIVDYTSY--DDMKYAIRKLDR-SEFRNAFSRSYVR---VREYDSR---RSY 103
R GI Y++ +++ AIR R SE R A R R VR+ +R RS
Sbjct: 7 LRATAKNLGIRGYSTMRKAELEEAIRDHGRVSEARVASPRRSPRQSPVRKSPARSPRRSP 66
Query: 104 SRSPSRSPYYSRSRS--RSPYYSRSRSPSRSWSYSPR---SRSYSPRGKYSRRSPSLSPA 158
S+SP +SP S +RS RSP S +SP+RS + SPR S+S + R +R+SPS SPA
Sbjct: 67 SKSPRKSPARSPARSPRRSPSKSPRKSPARSPARSPRRSPSKSPAVRKSPARKSPSRSPA 126
Query: 159 RSASQRSPS-GSPPRSFSR 176
R + RSP+ SP RS +R
Sbjct: 127 RKSPSRSPARKSPSRSPAR 145
>gi|195329206|ref|XP_002031302.1| GM24119 [Drosophila sechellia]
gi|195571103|ref|XP_002103543.1| GD18918 [Drosophila simulans]
gi|194120245|gb|EDW42288.1| GM24119 [Drosophila sechellia]
gi|194199470|gb|EDX13046.1| GD18918 [Drosophila simulans]
Length = 191
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + R G+V++ S DMK AI KLD +E
Sbjct: 1 MRQAGEVTYADAHKQRRN-EGVVEFASLSDMKTAIEKLDDTEL 42
>gi|268559888|ref|XP_002646089.1| C. briggsae CBR-RSR-1 protein [Caenorhabditis briggsae]
Length = 572
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 98 DSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSP--SRSWSYSPRSRSYSPRGKYSRRSPSL 155
++RR S SP R ++ P S S SP R S SPR R+ SP + RRSPS
Sbjct: 296 EARRRQSGSPPRGARKGSPEAKKPGRSPSGSPRGPRKLSGSPRRRAASPEARKPRRSPSG 355
Query: 156 SPAR----SASQRSPSGSPPR 172
SP R A++R PSGSPPR
Sbjct: 356 SPKRRQAFPAARRPPSGSPPR 376
>gi|119596371|gb|EAW75965.1| splicing factor, arginine/serine-rich 6, isoform CRA_b [Homo
sapiens]
Length = 215
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 1 MRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 42
>gi|354479738|ref|XP_003502066.1| PREDICTED: serine/arginine-rich splicing factor 6-like
[Cricetulus griseus]
gi|344251611|gb|EGW07715.1| Splicing factor, arginine/serine-rich 6 [Cricetulus griseus]
Length = 210
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 1 MRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 42
>gi|26342054|dbj|BAC34689.1| unnamed protein product [Mus musculus]
gi|149043027|gb|EDL96601.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_b [Rattus
norvegicus]
Length = 210
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ ++R G++++ SY DMK A+ KLD +E
Sbjct: 1 MRQAGEVTYADAHKERTN-EGVIEFRSYSDMKRALDKLDGTEI 42
>gi|313232321|emb|CBY09430.1| unnamed protein product [Oikopleura dioica]
Length = 344
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRK 77
R+ Y + V+ L + SW DLK+ MRRAG+V ++ G G V + + A++K
Sbjct: 108 RTKYTISVSNLSTRFSWADLKNFMRRAGEVTYTDAHVRSGEGNGEVCFKDRKGLYRAMQK 167
Query: 78 LD 79
L+
Sbjct: 168 LN 169
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
R D + +T L + SWQDLKD +R D C + + DR V + S DM+
Sbjct: 123 RDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDR---IATVSFRSSSDMRK 179
Query: 74 AIRKLDRSEF 83
A+ ++D E
Sbjct: 180 AVDRMDGFEI 189
>gi|313241655|emb|CBY33880.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 18 RSDYRVLVTGLPSSASWQDLKDHMRRAG----DVCFSQVFRDRGGMTGIVDYTSYDDMKY 73
R D + +T L + SWQDLKD +R D C + + DR V + S DM+
Sbjct: 105 RDDATISITNLSTRCSWQDLKDFIRDNARVEPDFCDAHKYEDR---IATVSFRSSGDMRK 161
Query: 74 AIRKLDRSEF 83
A+ ++D E
Sbjct: 162 AVDRMDGFEI 171
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 36/64 (56%), Gaps = 14/64 (21%)
Query: 116 SRSRSPYYSRSRSPSRSWSYSPRSRSYSPRGKYSRRSPSLSPARSASQRSPSGSPPRSFS 175
SRSRSP+Y R RSPSRS SYS RSP +P +RS SGSP S S
Sbjct: 140 SRSRSPHYYRGRSPSRSQSYS--------------RSPPQNPRHRLRERSYSGSPVDSRS 185
Query: 176 RSGS 179
RSGS
Sbjct: 186 RSGS 189
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 2 DRYSSYSSGG--------SRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAG-DVCFSQV 52
DRY + GG R S R +RVLV L S SWQDLKD +RR G + +++
Sbjct: 100 DRYDRFDRGGPPRRESRYGRPYSTR--HRVLVENLSSRISWQDLKDQVRRQGVEPTYAEA 157
Query: 53 FRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+ ++ + + D+K I K D
Sbjct: 158 HKRPN--EALLCFATPSDLKRCIEKCD 182
>gi|149025036|gb|EDL81403.1| splicing factor, arginine/serine-rich 5, isoform CRA_d [Rattus
norvegicus]
Length = 142
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 1 MRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 42
>gi|119601414|gb|EAW81008.1| splicing factor, arginine/serine-rich 5, isoform CRA_d [Homo
sapiens]
Length = 144
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 1 MRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 42
>gi|28193160|emb|CAD62322.1| unnamed protein product [Homo sapiens]
gi|119601410|gb|EAW81004.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Homo
sapiens]
gi|119601413|gb|EAW81007.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Homo
sapiens]
gi|119601415|gb|EAW81009.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Homo
sapiens]
Length = 145
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 1 MRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 42
>gi|170594581|ref|XP_001902042.1| Splicing factor, arginine/serine-rich 4 [Brugia malayi]
gi|158590986|gb|EDP29601.1| Splicing factor, arginine/serine-rich 4, putative [Brugia malayi]
Length = 347
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 10 GGSRG-VSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSY 68
GGSR V + YR V L DLKD MR AG+V F+ + GIV + +
Sbjct: 160 GGSRELVQLKMVYRWCVGVL-----LLDLKDIMRTAGEVTFADAHKQHPN-EGIVCFLTR 213
Query: 69 DDMKYAIRKLDRSEF 83
DD++ A+ KL E
Sbjct: 214 DDLERALDKLQGKEV 228
>gi|226467215|emb|CAX76088.1| Splicing factor, arginine/serine-rich 4 [Schistosoma japonicum]
Length = 242
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
MR+AG+V ++ + GIV++ +Y DMK AI K D
Sbjct: 1 MRKAGEVTYADAHKS-AKNDGIVEFAAYADMKEAIEKFD 38
>gi|256077398|ref|XP_002574992.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|353229594|emb|CCD75765.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 244
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V ++ + GIV++ +Y DMK AI K D E
Sbjct: 1 MRKAGEVTYADAHK-SAKNDGIVEFAAYADMKEAIEKFDGYEL 42
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 20/94 (21%)
Query: 4 YSSYSSGG--------SRGVSRRSD---------YRVLVTGLPSSASWQDLKDHMRRAG- 45
SSYS GG RG RR +RVLV L S SWQDLKD +RR G
Sbjct: 92 VSSYSGGGGRDRFDRYDRGPPRRESRYGRPYSTRHRVLVENLSSRISWQDLKDQVRRQGV 151
Query: 46 DVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
+ +++ + ++ + + D+K I K D
Sbjct: 152 EPTYAEAHKRPN--EALLCFATPSDLKRCIDKCD 183
>gi|242023374|ref|XP_002432109.1| Cylicin-1, putative [Pediculus humanus corporis]
gi|212517483|gb|EEB19371.1| Cylicin-1, putative [Pediculus humanus corporis]
Length = 1100
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 105 RSPSR--SPYYSRSRSRSPYYSRSRSPSRSWSYSPRSRSYSP 144
RSP+R SPY SRSRS Y R RSP WS+SPR RS SP
Sbjct: 277 RSPNRKRSPYTRFSRSRSKSYERRRSP---WSFSPRRRSKSP 315
>gi|343958296|dbj|BAK63003.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 145
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 41 MRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSEF 83
MR+AG+V F+ R + G+V++ SY D+K AI KL E
Sbjct: 1 MRQAGEVTFADAHRPKLN-EGVVEFASYGDLKNAIEKLSGKEI 42
>gi|312088457|ref|XP_003145870.1| Sfrs5 protein [Loa loa]
Length = 370
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 35 QDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLDRSE 82
DLKD MR AG+V F+ + GIV + + DD++ A+ KL E
Sbjct: 204 MDLKDIMRTAGEVTFADAHKQHPN-EGIVCFLTRDDLERALDKLQGKE 250
>gi|321260002|ref|XP_003194721.1| hypothetical protein CGB_F2170C [Cryptococcus gattii WM276]
gi|317461193|gb|ADV22934.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 728
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 4 YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG------ 57
+++ +GGS G S + ++ LP S + L H + G V ++ RG
Sbjct: 187 LAAWETGGS-GFDHES-TNLFISNLPQEISEEILGMHFAKQGPVATVKIMWPRGDEVFSQ 244
Query: 58 -----GMTGIVDYTSYDDMKYAIRKLDRSEF 83
G+TG V Y D + A+++LD SE+
Sbjct: 245 ASARRGLTGFVSYMERKDAERAVKELDGSEW 275
>gi|58268904|ref|XP_571608.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227843|gb|AAW44301.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 708
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 4 YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG------ 57
+++ +GGS G S + ++ LP + + L H + G V ++ RG
Sbjct: 188 LAAWETGGS-GFDHES-TNLFISNLPQEITEEILGLHFAKQGPVATVKIMWPRGDEAFSQ 245
Query: 58 -----GMTGIVDYTSYDDMKYAIRKLDRSEF 83
G+TG V Y D + A+++LD SE+
Sbjct: 246 ASARRGLTGFVSYMERKDAERAVKELDGSEW 276
>gi|170090824|ref|XP_001876634.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648127|gb|EDR12370.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 271
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 21 YRVLVTGLPSSASWQDLKDHMRRAGD-VCFSQVFRDRGGMTGIVDYTSYDDMKYAIRKLD 79
Y V++ L WQ+LKD R G V + + R R G G ++Y + D + AIR LD
Sbjct: 73 YPVIIMNLHRDVRWQELKDFGRLTGCLVAYCDLDRGRNG-RGFIEYFTRKDAEKAIRTLD 131
>gi|223944069|gb|ACN26118.1| unknown [Zea mays]
gi|413956219|gb|AFW88868.1| hypothetical protein ZEAMMB73_204329 [Zea mays]
Length = 315
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 23 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRD------RGGMTGIVDYTSYDDMKYAIR 76
+ VTGL + + +DL+ H G+V + V D RG G V + D I+
Sbjct: 42 LYVTGLSARVTDRDLEKHFSTEGEVIDASVVYDPWTRESRG--FGFVTMAAVKDADRCIK 99
Query: 77 KLDRSEFRNAFSRSYVRVREYDSRRSYSRSPSRSPYYSRSRSRSPYYSRSRSPSRSWSYS 136
LDRS + + V + RR R+P+ Y SR YS S SP R YS
Sbjct: 100 YLDRSVLQGRV----ITVEKAKRRRG--RTPTPGKYLGTKSSRGRRYSTSYSPDRRGRYS 153
Query: 137 PRSRSYSP 144
R YSP
Sbjct: 154 SR---YSP 158
>gi|134112882|ref|XP_774984.1| hypothetical protein CNBF1480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257632|gb|EAL20337.1| hypothetical protein CNBF1480 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 710
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 4 YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG------ 57
+++ +GGS G S + ++ LP + + L H + G V ++ RG
Sbjct: 188 LAAWETGGS-GFDHES-TNLFISNLPQEITEEILGLHFAKQGPVATVKIMWPRGDEAFSQ 245
Query: 58 -----GMTGIVDYTSYDDMKYAIRKLDRSEF 83
G+TG V Y D + A+++LD SE+
Sbjct: 246 ASARRGLTGFVSYMERKDAERAVKELDGSEW 276
>gi|405121203|gb|AFR95972.1| hypothetical protein CNAG_06685 [Cryptococcus neoformans var.
grubii H99]
Length = 708
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 4 YSSYSSGGSRGVSRRSDYRVLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRG------ 57
+++ +GGS G S + ++ LP + + L H + G V ++ RG
Sbjct: 169 LAAWETGGS-GFDHES-TNLFISNLPQEITEEILGLHFAKQGPVATVKIMWPRGDEAFSQ 226
Query: 58 -----GMTGIVDYTSYDDMKYAIRKLDRSEF 83
G+TG V Y D + A+++LD SE+
Sbjct: 227 ASTRRGLTGFVSYMERKDAERAVKELDGSEW 257
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.128 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,058,970,844
Number of Sequences: 23463169
Number of extensions: 127869879
Number of successful extensions: 882400
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4320
Number of HSP's successfully gapped in prelim test: 7916
Number of HSP's that attempted gapping in prelim test: 656711
Number of HSP's gapped (non-prelim): 101829
length of query: 188
length of database: 8,064,228,071
effective HSP length: 134
effective length of query: 54
effective length of database: 9,215,130,721
effective search space: 497617058934
effective search space used: 497617058934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)