Query 029771
Match_columns 188
No_of_seqs 147 out of 1261
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:53:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dxd_A Cell division protein F 100.0 2E-52 7E-57 361.1 17.2 177 1-177 111-287 (396)
2 1ofu_A FTSZ, cell division pro 100.0 1.5E-49 5.2E-54 338.7 15.8 177 1-177 105-282 (320)
3 2vxy_A FTSZ, cell division pro 100.0 3.4E-49 1.2E-53 342.6 17.9 177 1-177 105-281 (382)
4 1w5f_A Cell division protein F 100.0 8.2E-49 2.8E-53 337.7 16.2 177 1-177 115-293 (353)
5 2vap_A FTSZ, cell division pro 100.0 7.4E-48 2.5E-52 332.6 17.7 176 1-177 131-306 (364)
6 1rq2_A Cell division protein F 100.0 3.5E-48 1.2E-52 336.3 15.4 177 1-177 105-281 (382)
7 2vaw_A FTSZ, cell division pro 100.0 8.5E-48 2.9E-52 335.0 16.5 178 1-178 105-283 (394)
8 2r75_1 Cell division protein F 100.0 1.9E-47 6.6E-52 327.8 15.4 177 1-177 101-278 (338)
9 4ei7_A Plasmid replication pro 100.0 3.5E-38 1.2E-42 274.8 13.2 166 1-166 121-306 (389)
10 3v3t_A Cell division GTPase FT 100.0 1.5E-37 5E-42 265.9 12.2 160 1-175 98-265 (360)
11 3m89_A FTSZ/tubulin-related pr 100.0 1.6E-34 5.5E-39 251.4 9.9 173 1-175 157-360 (427)
12 2btq_B Tubulin btubb; structur 100.0 2.8E-33 9.5E-38 246.6 6.7 178 1-178 140-333 (426)
13 3cb2_A Gamma-1-tubulin, tubuli 100.0 2.6E-31 9E-36 236.4 11.7 177 1-177 141-339 (475)
14 3ryc_B Tubulin beta chain; alp 100.0 5.3E-31 1.8E-35 232.3 11.6 183 1-183 139-338 (445)
15 2bto_A Tubulin btuba; bacteria 100.0 2.4E-31 8.2E-36 236.7 8.7 176 1-176 143-338 (473)
16 3ryc_A Tubulin alpha chain; al 100.0 3.1E-30 1.1E-34 227.8 8.6 178 1-178 141-335 (451)
17 3r4v_A Putative uncharacterize 99.6 4.4E-16 1.5E-20 129.4 7.5 105 1-116 90-197 (315)
18 2nx2_A Hypothetical protein YP 51.2 19 0.00065 27.2 4.5 75 8-92 54-133 (181)
19 1c9k_A COBU, adenosylcobinamid 42.6 22 0.00074 26.9 3.5 36 3-39 6-42 (180)
20 3h4m_A Proteasome-activating n 39.8 1.1E+02 0.0036 23.6 7.4 61 2-63 57-119 (285)
21 3kbq_A Protein TA0487; structu 39.8 77 0.0026 23.7 6.2 45 10-60 25-69 (172)
22 1vim_A Hypothetical protein AF 37.6 39 0.0013 25.3 4.3 44 6-64 98-144 (200)
23 1y5e_A Molybdenum cofactor bio 36.2 89 0.0031 22.8 6.1 45 10-60 33-79 (169)
24 1nri_A Hypothetical protein HI 32.9 46 0.0016 26.9 4.3 43 5-62 148-193 (306)
25 2i9o_A MHB8A peptide; beta-hai 32.8 38 0.0013 18.3 2.5 10 11-20 25-34 (37)
26 3ake_A Cytidylate kinase; CMP 32.7 25 0.00087 25.7 2.5 22 1-22 7-28 (208)
27 2pjk_A 178AA long hypothetical 32.4 1.2E+02 0.004 22.6 6.2 45 10-60 42-88 (178)
28 1mkz_A Molybdenum cofactor bio 31.3 1.3E+02 0.0044 22.1 6.3 45 10-60 30-76 (172)
29 1y32_A Humanin; solution struc 30.8 12 0.0004 19.2 0.2 8 179-186 5-12 (26)
30 1t0c_A Insulin; type I beta-tu 29.3 20 0.00069 18.7 1.0 9 1-9 12-20 (31)
31 2is8_A Molybdopterin biosynthe 29.0 95 0.0033 22.6 5.1 45 10-60 23-69 (164)
32 3fdi_A Uncharacterized protein 28.9 29 0.001 26.1 2.3 25 1-25 11-35 (201)
33 1m3s_A Hypothetical protein YC 27.1 80 0.0027 22.8 4.5 37 13-64 98-134 (186)
34 3iwt_A 178AA long hypothetical 27.1 1.3E+02 0.0043 22.0 5.6 45 10-60 42-88 (178)
35 2grj_A Dephospho-COA kinase; T 26.4 47 0.0016 24.9 3.1 24 2-25 18-41 (192)
36 3rfq_A Pterin-4-alpha-carbinol 26.2 1.4E+02 0.0048 22.4 5.8 45 10-60 51-96 (185)
37 1d2n_A N-ethylmaleimide-sensit 26.1 2.2E+02 0.0075 21.7 8.0 60 2-62 70-132 (272)
38 2qz4_A Paraplegin; AAA+, SPG7, 25.7 2.1E+02 0.0072 21.4 8.2 62 2-64 45-108 (262)
39 1zuh_A Shikimate kinase; alpha 25.7 41 0.0014 23.8 2.5 25 1-25 12-36 (168)
40 3vfd_A Spastin; ATPase, microt 25.5 1.9E+02 0.0064 23.7 6.9 61 2-63 154-216 (389)
41 3o38_A Short chain dehydrogena 25.5 63 0.0022 24.8 3.8 25 3-27 29-53 (266)
42 3pzy_A MOG; ssgcid, seattle st 25.4 1.1E+02 0.0036 22.5 4.8 44 10-60 29-73 (164)
43 2j5v_A Glutamate 5-kinase; pro 25.2 2E+02 0.0069 23.9 7.1 53 13-65 87-139 (367)
44 3hdt_A Putative kinase; struct 24.6 35 0.0012 26.4 2.0 24 1-24 19-42 (223)
45 2iyv_A Shikimate kinase, SK; t 23.8 51 0.0017 23.7 2.8 25 1-25 7-31 (184)
46 3eie_A Vacuolar protein sortin 23.3 1.6E+02 0.0055 23.4 6.0 62 2-64 57-120 (322)
47 2g2c_A Putative molybdenum cof 22.9 1.3E+02 0.0044 21.9 4.9 45 10-60 27-76 (167)
48 3pp8_A Glyoxylate/hydroxypyruv 22.8 67 0.0023 26.2 3.5 54 6-60 146-200 (315)
49 2xhz_A KDSD, YRBH, arabinose 5 22.6 1E+02 0.0035 22.1 4.3 35 13-62 115-149 (183)
50 3dl0_A Adenylate kinase; phosp 22.6 74 0.0025 23.5 3.5 26 2-27 6-31 (216)
51 2h92_A Cytidylate kinase; ross 21.9 58 0.002 24.1 2.8 23 1-23 8-30 (219)
52 3trj_A Phosphoheptose isomeras 21.9 1.2E+02 0.0041 22.6 4.6 45 6-65 123-173 (201)
53 3gms_A Putative NADPH:quinone 21.6 92 0.0032 25.0 4.2 27 6-32 154-180 (340)
54 1tk9_A Phosphoheptose isomeras 21.4 1.4E+02 0.0047 21.5 4.8 37 13-64 129-165 (188)
55 3fb4_A Adenylate kinase; psych 21.3 77 0.0026 23.3 3.4 26 2-27 6-31 (216)
56 1uf9_A TT1252 protein; P-loop, 20.9 50 0.0017 24.0 2.2 24 1-25 13-36 (203)
57 3fxa_A SIS domain protein; str 20.3 1.2E+02 0.0042 22.2 4.4 43 6-63 101-146 (201)
No 1
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=100.00 E-value=2e-52 Score=361.13 Aligned_cols=177 Identities=59% Similarity=0.933 Sum_probs=173.7
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|+++++++++|+++++|||.||.+||++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 111 mGGGTGSGaapvIaeiake~g~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~af~ 190 (396)
T 4dxd_A 111 MGGGTGTGAAPVVAKIAKEMGALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMMEAFK 190 (396)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHhcCCceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcccCccccccceeeE
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~~~~~~a~~~Lv~i 160 (188)
.+|++|++++++||+++|+||.+|+||+|++++|++.|.++||+|+++|++|+.+|+++|+++|||+.++++|+++|++|
T Consensus 191 ~aN~ll~q~VsgIT~~irfpG~iNvDfaDv~t~m~~~G~A~mG~G~a~G~~ra~~A~~~Ai~sPLL~~~i~gAkgvLvnI 270 (396)
T 4dxd_A 191 EADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQGSALMGIGVSSGENRAVEAAKKAISSPLLETSIVGAQGVLMNI 270 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTBCCCHHHHHHHHTTCEECEEEEEEEESTTHHHHHHHHHHCCSSCSSCSTTCCEEEEEE
T ss_pred HHHHHHHHHHHhhhhhhccCCcccCCHHHHHHHhhcCCeEEEEEEeccCCchHHHHHHHHHhCccccCChhhhcceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHh
Q 029771 161 TGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 161 ~g~~~~~l~ev~~~~~~ 177 (188)
++++|+++.|+++++.-
T Consensus 271 tgg~dl~l~Ev~~~~~~ 287 (396)
T 4dxd_A 271 TGGESLSLFEAQEAADI 287 (396)
T ss_dssp EECTTCCHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHH
Confidence 99999999999999643
No 2
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=1.5e-49 Score=338.74 Aligned_cols=177 Identities=55% Similarity=0.854 Sum_probs=173.1
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|+++++++|+++++++|+|+||.+||++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 105 ~GGGTGSG~~~~la~~a~e~g~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~ 184 (320)
T 1ofu_A 105 MGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFA 184 (320)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHhcCCcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcc-cCccccccceee
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLD-IGIERATGIVWN 159 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~-~~~~~a~~~Lv~ 159 (188)
.+|++|++.+++||+++|+||.+|+||+|++++|+|+|.|++|+|++++++|+.+|+++|+++||++ +++++|++++++
T Consensus 185 ~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~t~l~~~g~~~~g~g~a~g~~~~~~a~~~a~~~~ll~~~d~~~ak~~l~~ 264 (320)
T 1ofu_A 185 KADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVN 264 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCCGGGCSEEEEE
T ss_pred HHHHHHHHHhcccHhhcccCCceeecHHHHHHhccCCCeeEEEEEecCcccHHHHHHHHHHhccccccCCccccceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 999999999999
Q ss_pred EecCCCCCHHHHHHHHHh
Q 029771 160 ITGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 160 i~g~~~~~l~ev~~~~~~ 177 (188)
|++++|++++|+++++.-
T Consensus 265 i~~~~d~~~~ev~~a~~~ 282 (320)
T 1ofu_A 265 ITAGPDLSLGEYSDVGNI 282 (320)
T ss_dssp EEECTTCCHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHH
Confidence 999999999999999853
No 3
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=3.4e-49 Score=342.63 Aligned_cols=177 Identities=60% Similarity=0.977 Sum_probs=173.6
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|+++++++||++++++|||.||.|||++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 105 mGGGTGSG~apvla~~ake~g~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 184 (382)
T 2vxy_A 105 MGGGTGTGAAPVIAQIAKDLGALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPMLEAFR 184 (382)
T ss_dssp SSSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHhCCCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcccCccccccceeeE
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~~~~~~a~~~Lv~i 160 (188)
.+|++|++++++||+++|+||.+|+||+|++++|+++|.|++|+|++++++|+.+|+++|+++|++++|+++|++++++|
T Consensus 185 ~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~~l~~i 264 (382)
T 2vxy_A 185 EADNVLRQGVQGISDLIATPGLINLDFADVKTIMSNKGSALMGIGIATGENRAAEAAKKAISSPLLEAAIDGAQGVLMNI 264 (382)
T ss_dssp HHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHHTTCSSEEEEEEEEEESTTHHHHHHHHHHTCTTSCSCGGGCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCccccCHHHHHHhccCCCceEEEEEecccccHHHHHHHHHHhCcCcCCChhhcceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHh
Q 029771 161 TGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 161 ~g~~~~~l~ev~~~~~~ 177 (188)
+|++|++++|+++++.-
T Consensus 265 ~gg~dl~~~ev~~a~~~ 281 (382)
T 2vxy_A 265 TGGTNLSLYEVQEAADI 281 (382)
T ss_dssp EECTTCCHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHH
Confidence 99999999999999743
No 4
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=8.2e-49 Score=337.69 Aligned_cols=177 Identities=47% Similarity=0.764 Sum_probs=173.5
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|++++++|++++++++|+|+||.+||++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 115 ~GGGTGSG~ap~la~~~ke~g~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 194 (353)
T 1w5f_A 115 FGGGTGTGASPVIAKIAKEMGILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIKDAFL 194 (353)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHhCCcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred HHhHHHHHhhcccccceecCccccc--chHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcccCcccccccee
Q 029771 81 LADDILRQGVRGISDIITIPGLVNV--DFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVW 158 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~--D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~~~~~~a~~~Lv 158 (188)
.+|++|++++++||+++|+||.+|+ ||+|++++|+|+|.|++|+|++++++|+.+|+++|+++|++++++++|+++++
T Consensus 195 ~~N~ll~~~v~~it~~ir~pG~iNv~~D~~dv~t~L~~~g~a~~g~g~a~g~~~v~ea~~~a~~~~ll~~d~~~ak~~l~ 274 (353)
T 1w5f_A 195 KADETLHQGVKGISELITKRGYIRLTSRFARIESVMKDAGAAILGIGVGKGEHRAREAAKKAMESKLIEHPVENASSIVF 274 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCTTCCSCGGGCSEEEE
T ss_pred HHHHHHHHHhcCchhhccCCcccccccCHHHHHHhccCCCeeEEEEeecCCcchHHHHHHHHHhCCCcCCChhhcceeEE
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred eEecCCCCCHHHHHHHHHh
Q 029771 159 NITGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 159 ~i~g~~~~~l~ev~~~~~~ 177 (188)
+|+++++++++|+++++.-
T Consensus 275 ~i~~~~dl~~~ev~~a~~~ 293 (353)
T 1w5f_A 275 NITAPSNIRMEEVHEAAMI 293 (353)
T ss_dssp EEEECTTCCHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999853
No 5
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=7.4e-48 Score=332.59 Aligned_cols=176 Identities=47% Similarity=0.796 Sum_probs=172.3
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|++++.+|++++++++|+|.||.+||++|+|||.+++++|++++|++|++|||+|+++|. ++++.++|+
T Consensus 131 ~GGGTGSG~ap~lae~lke~~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i~~af~ 209 (364)
T 2vap_A 131 LGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPLKLAFK 209 (364)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCChhhhhh
Confidence 7999999999999999999999999999999999999999999999999999999999999999999998 999988999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcccCccccccceeeE
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~~~~~~a~~~Lv~i 160 (188)
.+|++|++.+++|++++|+||.+|+||+|++++|+|+|.|++|+|++++++|+.+|+++|+++|++++++++|++++++|
T Consensus 210 ~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~~~ll~~d~~~ak~~l~~i 289 (364)
T 2vap_A 210 VADEVLINAVKGLVELITKDGLINVDFADVKAVMNNGGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATGALIHV 289 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEECSTTHHHHHHHHHHTCTTCCSCGGGCCEEEEEE
T ss_pred hHHHHHHHHHhhhhHHhhcCCceeccHHHHHHhccCCCeeEEEEEecCCcchHHHHHHHHHhCcCcCcChhhcceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHh
Q 029771 161 TGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 161 ~g~~~~~l~ev~~~~~~ 177 (188)
+++++++++|+++++.-
T Consensus 290 ~~~~dl~~~ev~~a~~~ 306 (364)
T 2vap_A 290 MGPEDLTLEEAREVVAT 306 (364)
T ss_dssp EECTTCCHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHH
Confidence 99999999999999854
No 6
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=3.5e-48 Score=336.31 Aligned_cols=177 Identities=56% Similarity=0.918 Sum_probs=173.5
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|+++++++++++++++|||.||.+||++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 105 ~GGGTGSG~ap~laela~e~g~ltvsVv~~Pf~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 184 (382)
T 1rq2_A 105 EGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLMDAFR 184 (382)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHcCCcEEEEEecCcccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcccCccccccceeeE
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNI 160 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~~~~~~a~~~Lv~i 160 (188)
.+|++|++.+++||+++|+||.+|+||+|++++|+++|.+++|+|++++++|+.+|+++|+++||+++++++|++++++|
T Consensus 185 ~~N~li~~~vs~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~ak~~l~~i 264 (382)
T 1rq2_A 185 SADEVLLNGVQGITDLITTPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLEASMEGAQGVLMSI 264 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCGGGCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHccCCceeccHHHHHHhccCCCeeEEEeeecccccHHHHHHHHHHhCcCcCCChhchheEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHh
Q 029771 161 TGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 161 ~g~~~~~l~ev~~~~~~ 177 (188)
+|+++++++|+++++.-
T Consensus 265 ~gg~dl~~~ev~~a~~~ 281 (382)
T 1rq2_A 265 AGGSDLGLFEINEAASL 281 (382)
T ss_dssp EECTTCCHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHH
Confidence 99999999999999853
No 7
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=8.5e-48 Score=335.03 Aligned_cols=178 Identities=54% Similarity=0.848 Sum_probs=173.4
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|++++++|++++++++|||.||.+||++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 105 mGGGTGSG~ap~lae~~ke~g~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~~af~ 184 (394)
T 2vaw_A 105 MGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLLAAFA 184 (394)
T ss_dssp TTSSHHHHHHHHHHHHHHHHTCEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHcCCcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCcc-cCccccccceee
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLD-IGIERATGIVWN 159 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~-~~~~~a~~~Lv~ 159 (188)
.+|++|++.+++||+++|+||.+|+||+|++++|+++|.+++|+|++++++|+.+|+++|+++||++ +++++|++++++
T Consensus 185 ~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~rv~ea~~~A~~spLl~~~d~~~ak~~lv~ 264 (394)
T 2vaw_A 185 KADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSEMGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGARGILVN 264 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTTTCCBEEEEEEECSTTHHHHHHHHHHTCGGGTTCCTTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccHHHHHHhccCCCceeEEEEeccccchHHHHHHHHHhcCccCCCCccccceeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 899999999999
Q ss_pred EecCCCCCHHHHHHHHHhh
Q 029771 160 ITGGSDLTLFEVSLFLFGC 178 (188)
Q Consensus 160 i~g~~~~~l~ev~~~~~~~ 178 (188)
|+++++++++|+++++.-.
T Consensus 265 i~~~~dl~~~ev~~a~~~I 283 (394)
T 2vaw_A 265 ITAGPDLSLGEYSDVGNII 283 (394)
T ss_dssp EEECTTCCHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHH
Confidence 9999999999999998543
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=1.9e-47 Score=327.85 Aligned_cols=177 Identities=41% Similarity=0.668 Sum_probs=172.7
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFN 80 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~ 80 (188)
||||||||++|+++++++++++++++|+|.||.+|+++|+|||.+++++|++++|++|++|||+|+++|.+++++.++|+
T Consensus 101 ~GGGTGSG~~~~ia~l~~e~g~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~~af~ 180 (338)
T 2r75_1 101 LGGGTGTGAAPVIAKTAKEMGILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIKDAFK 180 (338)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHHHHHH
T ss_pred cCCCcCCCchHHHHHHHHhcCCCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred HHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCccc-Cccccccceee
Q 029771 81 LADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDI-GIERATGIVWN 159 (188)
Q Consensus 81 ~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll~~-~~~~a~~~Lv~ 159 (188)
.+|++|++.+++||+++|+||.+|+||+|++++|.|+|.|++|+|++++++|+.+|+++|+.+|+++. ++.+|++++++
T Consensus 181 ~~N~~i~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~g~a~~g~g~a~g~~r~~~a~~~ai~s~lle~n~~~~a~~~l~~ 260 (338)
T 2r75_1 181 EVDSVLSKAVRGITSIVVTPAVINVDFADVRTTLEEGGLSIIGMGEGRGDEKADIAVEKAVTSPLLEGNTIEGARRLLVT 260 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTCEEEEEEEEEEESTTHHHHHHHHHHHCBSSBSSCGGGCSEEEEE
T ss_pred HHHHHHHHHHhhhhhhhccCCceeCCHHHhhhheeCCccceeeeccCCccchHHHHHHHHHHhhhhcccchhhhheEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 79999999999
Q ss_pred EecCCCCCHHHHHHHHHh
Q 029771 160 ITGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 160 i~g~~~~~l~ev~~~~~~ 177 (188)
++|++|++++|+++++.-
T Consensus 261 i~G~~dl~~~ev~~a~~~ 278 (338)
T 2r75_1 261 IWTSEDIPYDIVDEVMER 278 (338)
T ss_dssp EEECTTSCTTHHHHHHHH
T ss_pred EEcCCCCCHHHHHHHHHH
Confidence 999999999999999753
No 9
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=100.00 E-value=3.5e-38 Score=274.77 Aligned_cols=166 Identities=17% Similarity=0.153 Sum_probs=151.7
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHH---hcCCEEEEEeChhhHhhhc---CCCC
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLR---DNVDTLIVIPNDKLLTAVS---QSTP 74 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~---~~~D~vividN~~L~~~~~---~~~~ 74 (188)
||||||||++|++++++|++++++++|+|+||.+||++|..||..++++|+ +.+|++|++|||+|++++. +..+
T Consensus 121 ~GGGTGtGa~pvia~~~ke~~~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~ 200 (389)
T 4ei7_A 121 LGGGTGTGALLKAIEMLYEHDYNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSAL 200 (389)
T ss_dssp TTSSHHHHHHHHHHHHHHHTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCC
T ss_pred CCCCCccccHHHHHHHHHHcCCCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCC
Confidence 799999999999999999999999999999999999999999999999996 4689999999999998764 5678
Q ss_pred HHHHHHHHhHHHHHhhcccccceecC---cccccchHHHHHhhccCCccEEEeeecC-------ccchHHHHHHHHhcCC
Q 029771 75 VTEAFNLADDILRQGVRGISDIITIP---GLVNVDFADVRAIMANAGSSLMGIGTAT-------GKTRARDAALNAIQSP 144 (188)
Q Consensus 75 i~~af~~~N~~i~~~i~~it~~i~~~---g~in~D~~dl~~~L~~~g~~~ig~G~a~-------g~~~~~~A~~~Al~~~ 144 (188)
+.++|+.+|+++++.+.+|.+++..+ |++|+||+|++++|+.+|.++||+|.++ +++++.+|+++|+.+|
T Consensus 201 ~~~af~~an~~l~~~v~~i~~~~~~~~~~g~in~D~aDv~~vm~~~G~a~~G~~~~~~~~~~~~~~~~~~~a~~~ai~~~ 280 (389)
T 4ei7_A 201 ANEYTSYSNKYIADALHEINLVTSSFTPFSDTHFDASEFAQVINTPGVLSLAKLELKSNQLDTENPLGYLTQLGNALEKG 280 (389)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHTTSSEESSSCCCCHHHHHHHHTSSEEEEEEEEEEEGGGCCTTSTHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHHHHHhcCCCEEEEEeeeccccccccccchHHHHHHHHHHhcc
Confidence 99999999999999999987777654 8999999999999999999999999744 4558999999999999
Q ss_pred Ccc----cCccccccceeeEecCCCC
Q 029771 145 LLD----IGIERATGIVWNITGGSDL 166 (188)
Q Consensus 145 ll~----~~~~~a~~~Lv~i~g~~~~ 166 (188)
+++ +++++|+++|++|+++++.
T Consensus 281 ll~~~~~~~i~~A~~~ll~I~~~~~~ 306 (389)
T 4ei7_A 281 VLYDTEREELESAKKSALSIVTSPLR 306 (389)
T ss_dssp SSSBCCHHHHTTCSEEEEEEEECHHH
T ss_pred ccccccccChhhhheEEEEEEcCccc
Confidence 883 3789999999999998873
No 10
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=100.00 E-value=1.5e-37 Score=265.92 Aligned_cols=160 Identities=14% Similarity=0.125 Sum_probs=144.0
Q ss_pred CCCCcCCchHHHHHHHHHHcCC--ceEEEeecCCCchhHHhHHHHHHHHHHHHh---cCC--EEEEEeChhhHhhhcCCC
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGI--LTVGIVTTPFSFEGRRRAVQAQEGIASLRD---NVD--TLIVIPNDKLLTAVSQST 73 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~--~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~---~~D--~vividN~~L~~~~~~~~ 73 (188)
||||||||++|++++.+++.+. .+..+.+.||.+|+++|+|||.+++++|.+ ++| ++|++|||+
T Consensus 98 lGGGTGSG~~pvLae~lke~~~~k~v~~vtV~Pf~~Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea--------- 168 (360)
T 3v3t_A 98 MAGGAGSGITPPILGLAKQMYPNKHFGFVGVLPKATEDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK--------- 168 (360)
T ss_dssp TTSHHHHHHHHHHHHHHHHHCTTSEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG---------
T ss_pred cCCCccccHHHHHHHHHHHhCCCCeEEEEEEeCCCccchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC---------
Confidence 7999999999999999998663 344444599999999999999999999999 555 559999998
Q ss_pred CHHHHHHHHhHHHHHhhcccccceecCcccccchHHHHHhhccCCccEEEeeecCccchHHHHHHHHhcCCCc-ccCccc
Q 029771 74 PVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLL-DIGIER 152 (188)
Q Consensus 74 ~i~~af~~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~~g~~~ig~G~a~g~~~~~~A~~~Al~~~ll-~~~~~~ 152 (188)
.++|..+|++|++++++++.++++||.+|+||+|++++|...|.++|| +++|++|+++|+++|+++||| +.++++
T Consensus 169 --~~ay~~lN~lIaq~vs~lt~~l~~~G~iNVDfaDv~tvm~~~G~a~mg--~~~g~~ra~~A~~~Ai~spLl~~~~i~g 244 (360)
T 3v3t_A 169 --REKESDINKEFATLFNDFMNMSESHAEGVVDEDEISKLLTMKKSNVIL--EFDDKEDIQVALAKSLKESIFAEYTTNT 244 (360)
T ss_dssp --SSSHHHHHHHHHHHHHHHHGGGSCCSSCCCCHHHHHHHHHCCEEEEEE--ECCSSSCHHHHHHHHHHTCSBCCCCCCB
T ss_pred --chhHHHHHHHHHHHHHHHHHhhccCCceeeeHHHHHHHHhCCCcEEEE--EecCccHHHHHHHHHHhCcCCCCCCccC
Confidence 236999999999999999999999999999999999999999999999 478999999999999999999 589999
Q ss_pred cccceeeEecCCCCCHHHHHHHH
Q 029771 153 ATGIVWNITGGSDLTLFEVSLFL 175 (188)
Q Consensus 153 a~~~Lv~i~g~~~~~l~ev~~~~ 175 (188)
|+++|++++++ +.+.|+.+.+
T Consensus 245 a~~~linit~~--~d~~ei~~~i 265 (360)
T 3v3t_A 245 CEFMGISTTRV--VDVEAIKSIV 265 (360)
T ss_dssp CSEEEEEESSC--CCHHHHHHHH
T ss_pred CcEEEEEecCC--CCHHHHHHHh
Confidence 99999999874 7788888876
No 11
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=1.6e-34 Score=251.37 Aligned_cols=173 Identities=14% Similarity=0.141 Sum_probs=149.0
Q ss_pred CCCCcCCchHHHHHHHHHH--cCCceEEEeecCCCchhHHhHHHHHHHHHHHHh---------------cCCEEEEEeCh
Q 029771 1 MGGGTGTGGAPVIAGVAKS--MGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD---------------NVDTLIVIPND 63 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~--~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~---------------~~D~vividN~ 63 (188)
||||||||++|++++++++ +++++++++++||.+|++ +|||.+++++|++ ++|++|++|||
T Consensus 157 lGGGTGSG~gp~la~~lke~~~~~~~~~vvt~P~~~e~~--~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe 234 (427)
T 3m89_A 157 AGGGVGTGWGSLVLQLIREQFFPCPVSMLISLPSGDPDE--INNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNT 234 (427)
T ss_dssp TTSHHHHHHHHHHHHHHHTTCSSSCEEEEEEECCSCHHH--HHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHH
T ss_pred cCCCccccHHHHHHHHHHHhcCCCcEEEEEEECCCCccH--HHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehH
Confidence 7999999999999999998 369999999999999974 4999999999755 99999999999
Q ss_pred hhHhhhcCCCC---HHH---HHH-HHhHHHHHhhccccccee--cCcccccchHHHHHhhc-cCCccEEEeeecCcc--c
Q 029771 64 KLLTAVSQSTP---VTE---AFN-LADDILRQGVRGISDIIT--IPGLVNVDFADVRAIMA-NAGSSLMGIGTATGK--T 131 (188)
Q Consensus 64 ~L~~~~~~~~~---i~~---af~-~~N~~i~~~i~~it~~i~--~~g~in~D~~dl~~~L~-~~g~~~ig~G~a~g~--~ 131 (188)
+|.+.+..... +.+ +|+ .+|++|++.|++|++++. +||.+|+||+|++++|+ .+|.+.||++.+++. +
T Consensus 235 ~l~~i~~~~~~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G~a~iG~a~~~~~d~~ 314 (427)
T 3m89_A 235 QMQRIIESQKGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFLTIGKARIAKFDLH 314 (427)
T ss_dssp HHHHHHHHSSCSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCSEEEEEEEEECSCSHH
T ss_pred HHHHHHhhccccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCCeEEEEEecccccchh
Confidence 98776532211 222 899 899999999999999875 59999999999999999 479999999988776 4
Q ss_pred hHHHHHHHHhcCC-Cc-ccCccccccceeeEecCCCCCHHHHHHHH
Q 029771 132 RARDAALNAIQSP-LL-DIGIERATGIVWNITGGSDLTLFEVSLFL 175 (188)
Q Consensus 132 ~~~~A~~~Al~~~-ll-~~~~~~a~~~Lv~i~g~~~~~l~ev~~~~ 175 (188)
++++|+++|++++ |+ ++|+++|++++++|+++++..+.+..+++
T Consensus 315 ~~~~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~~~~~~~~ 360 (427)
T 3m89_A 315 SLENSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADFFKDVNTE 360 (427)
T ss_dssp HHHHHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGGGGCHHHH
T ss_pred hHHHHHHHHHhCCCcccccCcccccEEEEEEEeCchhhhhhhHHHH
Confidence 7999999999755 44 78999999999999999998887665544
No 12
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=99.98 E-value=2.8e-33 Score=246.59 Aligned_cols=178 Identities=16% Similarity=0.238 Sum_probs=144.9
Q ss_pred CCCCcCCchHHHHHHHHHHc----CCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSM----GILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~----~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~ 76 (188)
||||||||++|++++.+++. ++++++|+|.||.+|+.+|+|||.+++++|.+++|++|++|||+|+++|.++++..
T Consensus 140 ~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~~~ 219 (426)
T 2btq_B 140 IGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLNRS 219 (426)
T ss_dssp SSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSSSC
T ss_pred cCCCccccHHHHHHHHHHHHcCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCCCC
Confidence 79999999999999999874 48899999999999999999999999999999999999999999999998777755
Q ss_pred HHHHHHhHHHHHhhcccccceecCcccccchHHHHHhhcc-CCccEEEeeecCccc---------hHHHHHHHHh--cCC
Q 029771 77 EAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMAN-AGSSLMGIGTATGKT---------RARDAALNAI--QSP 144 (188)
Q Consensus 77 ~af~~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~-~g~~~ig~G~a~g~~---------~~~~A~~~Al--~~~ 144 (188)
.+|+.+|++|++++++||+++|+||.+|+||+|++++|.| +++||+.+|+++... ...+..++.. ++.
T Consensus 220 ~~f~~~N~lia~~v~~it~~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~ 299 (426)
T 2btq_B 220 PNYMDLNNIIALIVSSVTASLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNF 299 (426)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGB
T ss_pred cHHHHHHHHHHhhhcchhhhccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccce
Confidence 6999999999999999999999999999999999999999 699999999998532 1222333333 233
Q ss_pred CcccCccccccceeeEecCCCCCHHHHHHHHHhh
Q 029771 145 LLDIGIERATGIVWNITGGSDLTLFEVSLFLFGC 178 (188)
Q Consensus 145 ll~~~~~~a~~~Lv~i~g~~~~~l~ev~~~~~~~ 178 (188)
+..+|.+.++-+-+.+..+++++.+||++.+...
T Consensus 300 m~~~dp~~g~yla~~~i~rG~v~~~~v~~~~~~i 333 (426)
T 2btq_B 300 TAAIDWQQGVYLAASALFRGDVKAKDVDENMATI 333 (426)
T ss_dssp SSCCCTTTCCEEEEEEEEECC----CTTTTHHHH
T ss_pred eEecCCCCchHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 5567777777653333333389999999887543
No 13
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=99.97 E-value=2.6e-31 Score=236.38 Aligned_cols=177 Identities=15% Similarity=0.172 Sum_probs=145.9
Q ss_pred CCCCcCCchHHHHHHHHHH-cC---CceEEEeecCC-CchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCH
Q 029771 1 MGGGTGTGGAPVIAGVAKS-MG---ILTVGIVTTPF-SFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPV 75 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~-~~---~~~isivt~Pf-~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i 75 (188)
||||||||++|++++.+++ |+ +++++|+|.|+ .+|+.+|+|||.+++++|.+++|++|++||++|+++|.+++++
T Consensus 141 lGGGTGSG~~s~l~e~l~dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i 220 (475)
T 3cb2_A 141 IAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHI 220 (475)
T ss_dssp SSSSHHHHHHHHHHHHHHHHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCC
T ss_pred CCCCCCcChHHHHHHHHHHHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCC
Confidence 7999999999999998886 53 77888888887 5789999999999999999999999999999999999889998
Q ss_pred HH-HHHHHhHHHHHhhcccccceecCcccccchHHHHHhhcc-CCccEEEeeecCccch----------HHHHHHHHhc-
Q 029771 76 TE-AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMAN-AGSSLMGIGTATGKTR----------ARDAALNAIQ- 142 (188)
Q Consensus 76 ~~-af~~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~-~g~~~ig~G~a~g~~~----------~~~A~~~Al~- 142 (188)
.+ +|+.+|++|+++|++||.++|+||.+|+||+|++++|.| +++||+..+++|...+ ..+..++..+
T Consensus 221 ~~p~f~~~N~lia~~vs~iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~ 300 (475)
T 3cb2_A 221 QNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQP 300 (475)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSG
T ss_pred CcchHHHHHHHHhhhccccccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhcc
Confidence 87 999999999999999999999999999999999999999 6999999999885422 2333444443
Q ss_pred -CCCcccCcc---ccccceeeEecCCCCCHHHHHHHHHh
Q 029771 143 -SPLLDIGIE---RATGIVWNITGGSDLTLFEVSLFLFG 177 (188)
Q Consensus 143 -~~ll~~~~~---~a~~~Lv~i~g~~~~~l~ev~~~~~~ 177 (188)
+.+..+|.+ ..+-+-+....++++...||++.+..
T Consensus 301 ~n~m~~~dp~~~~~gkyla~~~~~RG~v~~~dv~~~i~~ 339 (475)
T 3cb2_A 301 KNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQR 339 (475)
T ss_dssp GGBSSCCCCC--CCCCEEEEEEEEESSCCHHHHHHHHHH
T ss_pred ccceEecCcccccccchhhhHHhhcCCCCHHHHHHHHHH
Confidence 234456665 44444333333349999999998754
No 14
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=99.97 E-value=5.3e-31 Score=232.34 Aligned_cols=183 Identities=14% Similarity=0.207 Sum_probs=152.9
Q ss_pred CCCCcCCchHHHHHH-HHHHcC---CceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHH
Q 029771 1 MGGGTGTGGAPVIAG-VAKSMG---ILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (188)
Q Consensus 1 lGGGTGsG~~p~ia~-~a~~~~---~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~ 76 (188)
+|||||||++|++.+ +..+|+ +.+++|+|.|+.+|+.+++|||.+++++|.+++|+++++|||+|+++|.+++++.
T Consensus 139 lgGGTGSG~gs~lle~L~~ey~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~ 218 (445)
T 3ryc_B 139 LGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLT 218 (445)
T ss_dssp SSSSHHHHHHHHHHHHHHHHCTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCS
T ss_pred cCCCCCCcHHHHHHHHHHHHcCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCC
Confidence 699999999997765 666786 5688999999889999999999999999999999999999999999998889986
Q ss_pred H-HHHHHhHHHHHhhcccccceecCcccccchHHHHHhhcc-CCccEEEeeecCccc---------hHHHHHHHHhc--C
Q 029771 77 E-AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMAN-AGSSLMGIGTATGKT---------RARDAALNAIQ--S 143 (188)
Q Consensus 77 ~-af~~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~-~g~~~ig~G~a~g~~---------~~~~A~~~Al~--~ 143 (188)
+ +|+.+|++|+++++++|.++|+||.+|+|+.|+.++|.| +++||+..+++|... .+.+...+.++ +
T Consensus 219 ~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n 298 (445)
T 3ryc_B 219 TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKN 298 (445)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGG
T ss_pred CCcchhhHHHHHhcchhhccccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcC
Confidence 5 999999999999999999999999999999999999999 699999999987532 23444444443 2
Q ss_pred CCcccCccccccceeeEecCCCCCHHHHHHHHHhhhhhhh
Q 029771 144 PLLDIGIERATGIVWNITGGSDLTLFEVSLFLFGCLFVCL 183 (188)
Q Consensus 144 ~ll~~~~~~a~~~Lv~i~g~~~~~l~ev~~~~~~~~~~~~ 183 (188)
.+..+|....+-+-+.+..+++++++||++++..+-.|+.
T Consensus 299 ~m~~~dp~~gky~a~~~~~RG~v~~kdv~~~i~~ik~k~~ 338 (445)
T 3ryc_B 299 MMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNKNS 338 (445)
T ss_dssp BSSSCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHTG
T ss_pred CeeecCCCCCcceeeeeeeecCCChHHHHHHHHHHHhhCc
Confidence 2445677665555554444458999999999987766643
No 15
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=99.97 E-value=2.4e-31 Score=236.74 Aligned_cols=176 Identities=12% Similarity=0.168 Sum_probs=139.1
Q ss_pred CCCCcCCchHHHHHHHHHHc----CCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSM----GILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~----~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~ 76 (188)
||||||||++|++++.+++. .+++++|+|.|+.+|+.+++|||.+++++|.+++|++|++|||+|+++|.+++++.
T Consensus 143 lgGGTGSG~~~~l~e~l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~ 222 (473)
T 2bto_A 143 IGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIE 222 (473)
T ss_dssp SSSSHHHHHHHHHHHHHHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCS
T ss_pred CCCCCCcchHHHHHHHHHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccC
Confidence 79999999999999988864 37889999999889999999999999999999999999999999999998888886
Q ss_pred -HHHHHHhHHHHHhhcccccceecCcccccc--hHHHHHhhcc-CCccEEEeeecCcc---------chHHHHHHHHhc-
Q 029771 77 -EAFNLADDILRQGVRGISDIITIPGLVNVD--FADVRAIMAN-AGSSLMGIGTATGK---------TRARDAALNAIQ- 142 (188)
Q Consensus 77 -~af~~~N~~i~~~i~~it~~i~~~g~in~D--~~dl~~~L~~-~g~~~ig~G~a~g~---------~~~~~A~~~Al~- 142 (188)
.+|+.+|++|++++++||.++|+||.+|+| |+|++++|.| +++||+..|.+|.. ....+...+..+
T Consensus 223 ~~~f~~~N~lia~~v~~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~ 302 (473)
T 2bto_A 223 SPTVDDLNLLITEALAGITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDN 302 (473)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSG
T ss_pred cchHHHHHHHHhhhcccchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhccc
Confidence 599999999999999999999999999999 9999999999 69999999998732 134455555543
Q ss_pred -CCCcccCccccccceeeEecCCCCCHHHH-HHHHH
Q 029771 143 -SPLLDIGIERATGIVWNITGGSDLTLFEV-SLFLF 176 (188)
Q Consensus 143 -~~ll~~~~~~a~~~Lv~i~g~~~~~l~ev-~~~~~ 176 (188)
+.+..+|...++-+.+.+..+++++..|+ ++.+.
T Consensus 303 ~n~m~~~dp~~gkyla~~~i~RG~v~~~dv~~~~i~ 338 (473)
T 2bto_A 303 GSVFAACSPMEGRFLSTAVLYRGIMEDKPLADAALA 338 (473)
T ss_dssp GGBSSSSCGGGSCEEEEEEEEEEC----CCHHHHHH
T ss_pred ccceeecCCCCchHHHHHHhhcCCCChHHhhHHHHH
Confidence 23556788777775433333336888999 87773
No 16
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=99.96 E-value=3.1e-30 Score=227.77 Aligned_cols=178 Identities=12% Similarity=0.180 Sum_probs=149.1
Q ss_pred CCCCcCCchHHHHHH-HHHHcC---CceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHH
Q 029771 1 MGGGTGTGGAPVIAG-VAKSMG---ILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVT 76 (188)
Q Consensus 1 lGGGTGsG~~p~ia~-~a~~~~---~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~ 76 (188)
||||||||++|++.+ +..+|+ +++++|+|.|..++..+++|||.+++++|.+++|+++++|||+|+++|.+++++.
T Consensus 141 lgGGTGSG~gs~lle~L~~ey~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~ 220 (451)
T 3ryc_A 141 FGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIE 220 (451)
T ss_dssp SSSHHHHHHHHHHHHHHHHHTTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCS
T ss_pred cCCCCCccHHHHHHHHHHHhcCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCC
Confidence 699999999987766 556776 5678888888888999999999999999999999999999999999998778886
Q ss_pred H-HHHHHhHHHHHhhcccccceecCcccccchHHHHHhhcc-CCccEEEeeecCccc---------hHHHHHHHHhc--C
Q 029771 77 E-AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMAN-AGSSLMGIGTATGKT---------RARDAALNAIQ--S 143 (188)
Q Consensus 77 ~-af~~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~-~g~~~ig~G~a~g~~---------~~~~A~~~Al~--~ 143 (188)
. +|..+|++|+++++++|.++||||.+|+|++|++++|.| +++||+..+++|... ++.+...+.++ +
T Consensus 221 ~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n 300 (451)
T 3ryc_A 221 RPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 300 (451)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGG
T ss_pred CCCchhhHHHHHhcccccccccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhcccc
Confidence 5 899999999999999999999999999999999999999 699999999987531 34445555443 2
Q ss_pred CCcccCccccccceeeEecCCCCCHHHHHHHHHhh
Q 029771 144 PLLDIGIERATGIVWNITGGSDLTLFEVSLFLFGC 178 (188)
Q Consensus 144 ~ll~~~~~~a~~~Lv~i~g~~~~~l~ev~~~~~~~ 178 (188)
.+..+|.+..+-+-+.+..+++++++||++.+..+
T Consensus 301 ~m~~~dp~~gky~a~~~~~RG~v~~~dv~~~i~~i 335 (451)
T 3ryc_A 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI 335 (451)
T ss_dssp BSSCCCGGGSCEEEEEEEEEESCCHHHHHHHHHHH
T ss_pred ceEecCCCCCchheehhhcccCCCHHHHHHHHHHH
Confidence 35567777766665555545589999999998443
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.63 E-value=4.4e-16 Score=129.42 Aligned_cols=105 Identities=18% Similarity=0.260 Sum_probs=88.4
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhHHhHHH---HHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHH
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQ---AQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTE 77 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~n---A~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~ 77 (188)
||||||||++|++++++++.|++++++|+.| .|+..+..| |..+|++|.+.+|.+|+|| |++. .++++.
T Consensus 90 LGGGTGTGaAPVvAeiake~GalvVavVt~~--~E~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Len-~~~lp~-- 161 (315)
T 3r4v_A 90 LGGGSGSVLGPLITGQLADRKASFVSFVVGA--MESTDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVPN-TQGRSY-- 161 (315)
T ss_dssp SSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC--CSSHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEEC-CTTCCH--
T ss_pred cCCccccchHHHHHHHHHHcCCCEEEEEecC--CCcchhhhchHHHHHHHHHHHhccCCcEEEe---cccc-CCCCch--
Confidence 7999999999999999999999999999999 566677888 6888999999999999999 6653 455555
Q ss_pred HHHHHhHHHHHhhcccccceecCcccccchHHHHHhhcc
Q 029771 78 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMAN 116 (188)
Q Consensus 78 af~~~N~~i~~~i~~it~~i~~~g~in~D~~dl~~~L~~ 116 (188)
+.+|+.++..+..+..++. ++-..+|..|+.+...=
T Consensus 162 --~~lN~eia~rL~al~~l~~-~~~~~ld~~di~n~~~~ 197 (315)
T 3r4v_A 162 --ESINDEIAEKIRKVVLLVN-QNHGRLDVHDVANWVRF 197 (315)
T ss_dssp --HHHHHHHHHHHHHHHHHTS-SCSBTCCHHHHHHHHSG
T ss_pred --HHHHHHHHHHHHHHHHHhc-cCcccccHHHHhhHhhh
Confidence 7889999888887766554 46688999999887753
No 18
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=51.19 E-value=19 Score=27.23 Aligned_cols=75 Identities=15% Similarity=0.111 Sum_probs=43.5
Q ss_pred chHHHHHHHHHH----cC-CceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhhHhhhcCCCCHHHHHHHH
Q 029771 8 GGAPVIAGVAKS----MG-ILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLA 82 (188)
Q Consensus 8 G~~p~ia~~a~~----~~-~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L~~~~~~~~~i~~af~~~ 82 (188)
|+=.+.++.+.+ ++ +....+ +||..-+..-..........+.+.+|.+..+...... -..+|...
T Consensus 54 G~D~~aae~vl~lk~~y~~i~L~~v--~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~--------~~~~~~~r 123 (181)
T 2nx2_A 54 GVELWAAEAAYDLQEEYPDLKVAVI--TPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYE--------SPLQFKQK 123 (181)
T ss_dssp THHHHHHHHHHTTTTTCTTCEEEEE--ESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCC--------CHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCceEEEE--ecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCC--------CHHHHHHH
Confidence 443444555544 44 444444 4774333222233456788999999999988654421 13467788
Q ss_pred hHHHHHhhcc
Q 029771 83 DDILRQGVRG 92 (188)
Q Consensus 83 N~~i~~~i~~ 92 (188)
|+.+.+.-..
T Consensus 124 n~~mvd~sD~ 133 (181)
T 2nx2_A 124 NQFFIDKSDG 133 (181)
T ss_dssp HHHHHHHSSE
T ss_pred HHHHHHHCCE
Confidence 8887665443
No 19
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=42.56 E-value=22 Score=26.93 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=23.5
Q ss_pred CCcCCchHHHHHHHHHHcCCceEEEee-cCCCchhHHh
Q 029771 3 GGTGTGGAPVIAGVAKSMGILTVGIVT-TPFSFEGRRR 39 (188)
Q Consensus 3 GGTGsG~~p~ia~~a~~~~~~~isivt-~Pf~~Eg~~~ 39 (188)
||+|||=+.+-.+++++ +..++-+.| .|+..|-..|
T Consensus 6 Gg~~SGKS~~A~~la~~-~~~~~yiaT~~~~d~e~~~r 42 (180)
T 1c9k_A 6 GGARSGKSRHAEALIGD-APQVLYIATSQILDDEMAAR 42 (180)
T ss_dssp ECTTSSHHHHHHHHHCS-CSSEEEEECCCC------CH
T ss_pred CCCCCcHHHHHHHHHhc-CCCeEEEecCCCCCHHHHHH
Confidence 89999999888889887 777766777 4555554433
No 20
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=39.82 E-value=1.1e+02 Score=23.63 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=36.8
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEEeecCCC--chhHHhHHHHHHHHHHHHhcCCEEEEEeCh
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPFS--FEGRRRAVQAQEGIASLRDNVDTLIVIPND 63 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~--~Eg~~~~~nA~~~l~~L~~~~D~vividN~ 63 (188)
-|..|||=+.++..++++.+...+.+-...+. +.|.. ..+....++......-.++++|.=
T Consensus 57 ~G~~GtGKT~la~~la~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~vl~iDEi 119 (285)
T 3h4m_A 57 YGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEG-ASLVKDIFKLAKEKAPSIIFIDEI 119 (285)
T ss_dssp ESSSSSSHHHHHHHHHHHTTCEEEEEEGGGGCCCSTTHH-HHHHHHHHHHHHHTCSEEEEEETT
T ss_pred ECCCCCcHHHHHHHHHHHhCCCEEEEehHHHHHhccchH-HHHHHHHHHHHHHcCCeEEEEECH
Confidence 48899999888888899988777666443321 22211 112222334444455578889873
No 21
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=39.78 E-value=77 Score=23.68 Aligned_cols=45 Identities=9% Similarity=-0.059 Sum_probs=33.1
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vivi 60 (188)
++.+++.+++.|..+....+.|...+.. ...+++..+.+|.+|.-
T Consensus 25 ~~~l~~~L~~~G~~v~~~~iv~Dd~~~I------~~~l~~a~~~~DlVitt 69 (172)
T 3kbq_A 25 AAFIGNFLTYHGYQVRRGFVVMDDLDEI------GWAFRVALEVSDLVVSS 69 (172)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHHHH------HHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHH------HHHHHHHHhcCCEEEEc
Confidence 6889999999998888777788865533 23455555568988875
No 22
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=37.56 E-value=39 Score=25.26 Aligned_cols=44 Identities=27% Similarity=0.349 Sum_probs=31.4
Q ss_pred CCchHH---HHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 029771 6 GTGGAP---VIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (188)
Q Consensus 6 GsG~~p---~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~ 64 (188)
.||-++ -+++.||+.|+.+++|...|.+ .|.+.+|.++.++...
T Consensus 98 ~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s---------------~La~~ad~~l~~~~~~ 144 (200)
T 1vim_A 98 GSGETTSVVNISKKAKDIGSKLVAVTGKRDS---------------SLAKMADVVMVVKGKM 144 (200)
T ss_dssp SSSCCHHHHHHHHHHHHHTCEEEEEESCTTS---------------HHHHHCSEEEECCSSC
T ss_pred CCCCcHHHHHHHHHHHHCCCeEEEEECCCCC---------------hHHHhCCEEEEECCcc
Confidence 355444 3468888899999999655543 3677899999887654
No 23
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=36.21 E-value=89 Score=22.83 Aligned_cols=45 Identities=13% Similarity=0.106 Sum_probs=30.7
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHh--cCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD--NVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~--~~D~vivi 60 (188)
+|.+++..++.|..+....+.|...|.. ...+++..+ .+|.+|.-
T Consensus 33 ~~~l~~~L~~~G~~v~~~~iv~Dd~~~i------~~~l~~~~~~~~~DlVitt 79 (169)
T 1y5e_A 33 GQLLHELLKEAGHKVTSYEIVKDDKESI------QQAVLAGYHKEDVDVVLTN 79 (169)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECSSHHHH------HHHHHHHHTCTTCSEEEEE
T ss_pred HHHHHHHHHHCCCeEeEEEEeCCCHHHH------HHHHHHHHhcCCCCEEEEc
Confidence 6788888888888777777778765432 234555555 67877665
No 24
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=32.92 E-value=46 Score=26.90 Aligned_cols=43 Identities=30% Similarity=0.436 Sum_probs=31.2
Q ss_pred cCCchHHHH---HHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeC
Q 029771 5 TGTGGAPVI---AGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPN 62 (188)
Q Consensus 5 TGsG~~p~i---a~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN 62 (188)
+.||-+|.+ ++.||+.|+.+++|.-.|.+ .|.+.+|.++.++.
T Consensus 148 S~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S---------------~La~~AD~~I~~~~ 193 (306)
T 1nri_A 148 AASGRTPYVIAGLQYAKSLGALTISIASNPKS---------------EMAEIADIAIETIV 193 (306)
T ss_dssp CTTSCCHHHHHHHHHHHHHTCEEEEEESSTTC---------------HHHHHSSEEEECCC
T ss_pred ECCCCCHHHHHHHHHHHHCCCEEEEEECCCCC---------------hHHHhCCEEEEcCC
Confidence 346666644 57788889999999766653 35677999888864
No 25
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=32.76 E-value=38 Score=18.31 Aligned_cols=10 Identities=20% Similarity=0.305 Sum_probs=4.9
Q ss_pred HHHHHHHHHc
Q 029771 11 PVIAGVAKSM 20 (188)
Q Consensus 11 p~ia~~a~~~ 20 (188)
.+..+++..+
T Consensus 25 ayakriaeam 34 (37)
T 2i9o_A 25 AYAKRIAEAM 34 (37)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3445565543
No 26
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=32.69 E-value=25 Score=25.73 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=18.7
Q ss_pred CCCCcCCchHHHHHHHHHHcCC
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGI 22 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~ 22 (188)
+.|+.|||=+.+...+++.+|.
T Consensus 7 i~G~~GsGKst~~~~la~~lg~ 28 (208)
T 3ake_A 7 IDGPSASGKSSVARRVAAALGV 28 (208)
T ss_dssp EECSTTSSHHHHHHHHHHHHTC
T ss_pred EECCCCCCHHHHHHHHHHhcCC
Confidence 3699999999998888888884
No 27
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=32.44 E-value=1.2e+02 Score=22.56 Aligned_cols=45 Identities=16% Similarity=0.108 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhc--CCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDN--VDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~--~D~vivi 60 (188)
+|.+++.+++.|..+......|...|.. ...+++..+. +|.+|.-
T Consensus 42 ~~~L~~~l~~~G~~v~~~~iv~Dd~~~I------~~al~~a~~~~~~DlVitt 88 (178)
T 2pjk_A 42 GDIIKQLLIENGHKIIGYSLVPDDKIKI------LKAFTDALSIDEVDVIIST 88 (178)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHHHH------HHHHHHHHTCTTCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHH------HHHHHHHHhcCCCCEEEEC
Confidence 6888999999998777777778865532 2345555555 7877765
No 28
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=31.27 E-value=1.3e+02 Score=22.06 Aligned_cols=45 Identities=9% Similarity=0.084 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHh--cCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD--NVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~--~~D~vivi 60 (188)
+|.+++..++.|..+....+.|...+.. ...+++..+ .+|.+|.-
T Consensus 30 ~~~l~~~L~~~G~~v~~~~iv~Dd~~~i------~~~l~~a~~~~~~DlVitt 76 (172)
T 1mkz_A 30 GHYLRDSAQEAGHHVVDKAIVKENRYAI------RAQVSAWIASDDVQVVLIT 76 (172)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHHHH------HHHHHHHHHSSSCCEEEEE
T ss_pred HHHHHHHHHHCCCeEeEEEEeCCCHHHH------HHHHHHHHhcCCCCEEEeC
Confidence 6889999999998877777788765533 234455554 38877765
No 29
>1y32_A Humanin; solution structure, alzheimer'S disease, neuroprotection, unknown function; NMR {Synthetic} PDB: 2gd3_A
Probab=30.85 E-value=12 Score=19.15 Aligned_cols=8 Identities=63% Similarity=0.957 Sum_probs=6.4
Q ss_pred hhhhhhcc
Q 029771 179 LFVCLLLS 186 (188)
Q Consensus 179 ~~~~~~~~ 186 (188)
-|-||||+
T Consensus 5 gFsCLLL~ 12 (26)
T 1y32_A 5 GFSCLLLL 12 (26)
T ss_dssp HHHHHHHH
T ss_pred ccEEEEEE
Confidence 48899886
No 30
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=29.31 E-value=20 Score=18.68 Aligned_cols=9 Identities=56% Similarity=1.365 Sum_probs=7.4
Q ss_pred CCCCcCCch
Q 029771 1 MGGGTGTGG 9 (188)
Q Consensus 1 lGGGTGsG~ 9 (188)
||||-|.|.
T Consensus 12 lgggpgags 20 (31)
T 1t0c_A 12 LGGGPGAGS 20 (31)
T ss_dssp CCCSTTSSS
T ss_pred ecCCCCccc
Confidence 689988886
No 31
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=28.98 E-value=95 Score=22.55 Aligned_cols=45 Identities=11% Similarity=-0.027 Sum_probs=31.7
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHh--cCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD--NVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~--~~D~vivi 60 (188)
+|.+++..++.|..+....+.|...+.. ...+++..+ .+|.+|.-
T Consensus 23 ~~~l~~~l~~~G~~v~~~~iv~Dd~~~i------~~~l~~~~~~~~~DlVitt 69 (164)
T 2is8_A 23 HLAIREVLAGGPFEVAAYELVPDEPPMI------KKVLRLWADREGLDLILTN 69 (164)
T ss_dssp HHHHHHHHTTSSEEEEEEEEECSCHHHH------HHHHHHHHHTSCCSEEEEE
T ss_pred HHHHHHHHHHCCCeEeEEEEcCCCHHHH------HHHHHHHHhcCCCCEEEEc
Confidence 6889999999998777777778765543 234455555 68877765
No 32
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=28.91 E-value=29 Score=26.14 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=20.6
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceE
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTV 25 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~i 25 (188)
++|..|||-+.+-.++|+.+|...+
T Consensus 11 i~g~~GsGk~ti~~~la~~lg~~~~ 35 (201)
T 3fdi_A 11 IGREFGSGGHLVAKKLAEHYNIPLY 35 (201)
T ss_dssp EEECTTSSHHHHHHHHHHHTTCCEE
T ss_pred EeCCCCCCHHHHHHHHHHHhCcCEE
Confidence 3688999999999999999885433
No 33
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=27.13 E-value=80 Score=22.83 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=27.6
Q ss_pred HHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 029771 13 IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (188)
Q Consensus 13 ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~ 64 (188)
+++.+|+.|+.+++|...|.+ .|.+.+|.++.++...
T Consensus 98 ~~~~ak~~g~~vi~IT~~~~s---------------~l~~~ad~~l~~~~~~ 134 (186)
T 1m3s_A 98 TAAKAKSLHGIVAALTINPES---------------SIGKQADLIIRMPGSP 134 (186)
T ss_dssp HHHHHHHTTCEEEEEESCTTS---------------HHHHHCSEEEECSCCS
T ss_pred HHHHHHHCCCEEEEEECCCCC---------------chHHhCCEEEEeCCcc
Confidence 468888899999988655442 3567899999887654
No 34
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=27.08 E-value=1.3e+02 Score=21.98 Aligned_cols=45 Identities=18% Similarity=0.162 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHH--hcCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLR--DNVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~--~~~D~vivi 60 (188)
+|+|++..++.|..++...+.|...|... ..+++.. +.+|.+|.-
T Consensus 42 g~~L~~~L~~~G~~v~~~~iV~Dd~~~i~------~al~~~~a~~~~DlVitt 88 (178)
T 3iwt_A 42 GDIIKQLLIENGHKIIGYSLVPDDKIKIL------KAFTDALSIDEVDVIIST 88 (178)
T ss_dssp HHHHHHHHHHTTCEEEEEEEECSCHHHHH------HHHHHHHTCTTCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHH------HHHHHHHhcCCCCEEEec
Confidence 68999999999988888888888655322 2333332 357777764
No 35
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=26.36 E-value=47 Score=24.89 Aligned_cols=24 Identities=29% Similarity=0.374 Sum_probs=18.0
Q ss_pred CCCcCCchHHHHHHHHHHcCCceE
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTV 25 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~i 25 (188)
-||.|||=+.+...+++.+|..++
T Consensus 18 tG~~GSGKSTva~~L~~~lg~~vi 41 (192)
T 2grj_A 18 TGKIGTGKSTVCEILKNKYGAHVV 41 (192)
T ss_dssp ECSTTSSHHHHHHHHHHHHCCEEE
T ss_pred ECCCCCCHHHHHHHHHHhcCCEEE
Confidence 489999988887777776675443
No 36
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.17 E-value=1.4e+02 Score=22.40 Aligned_cols=45 Identities=16% Similarity=0.327 Sum_probs=28.3
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHH-hcCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLR-DNVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~-~~~D~vivi 60 (188)
+|.+++.+++.|..+......|...|..+ ..+++.. +.+|.+|.-
T Consensus 51 ~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~------~al~~a~~~~~DlVItt 96 (185)
T 3rfq_A 51 GPLVTELLTEAGFVVDGVVAVEADEVDIR------NALNTAVIGGVDLVVSV 96 (185)
T ss_dssp HHHHHHHHHHTTEEEEEEEEECSCHHHHH------HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHH------HHHHHHHhCCCCEEEEC
Confidence 67788888888876666666677554322 2333433 567877765
No 37
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=26.09 E-value=2.2e+02 Score=21.71 Aligned_cols=60 Identities=13% Similarity=0.180 Sum_probs=34.5
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEEeecCCCchhH---HhHHHHHHHHHHHHhcCCEEEEEeC
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSFEGR---RRAVQAQEGIASLRDNVDTLIVIPN 62 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~Eg~---~~~~nA~~~l~~L~~~~D~vividN 62 (188)
-|-+|||=+.+...++++.+...+.+.. |....|. .........++...+....++++|.
T Consensus 70 ~G~~GtGKT~la~~ia~~~~~~~~~i~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vl~iDE 132 (272)
T 1d2n_A 70 EGPPHSGKTALAAKIAEESNFPFIKICS-PDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDD 132 (272)
T ss_dssp ECSTTSSHHHHHHHHHHHHTCSEEEEEC-GGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECC
T ss_pred ECCCCCcHHHHHHHHHHHhCCCEEEEeC-HHHhcCCchHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 4889999888888888888877666643 3221111 1111112223333334567888887
No 38
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=25.71 E-value=2.1e+02 Score=21.36 Aligned_cols=62 Identities=16% Similarity=0.209 Sum_probs=36.2
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEEeecCCC--chhHHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPFS--FEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~--~Eg~~~~~nA~~~l~~L~~~~D~vividN~~ 64 (188)
-|-.|||=+.+...++++.+...+.+-...+. +.+.. ..+....++...+....++++|.=.
T Consensus 45 ~G~~GtGKT~la~~la~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~~vl~iDeid 108 (262)
T 2qz4_A 45 LGPPGCGKTLLAKAVATEAQVPFLAMAGAEFVEVIGGLG-AARVRSLFKEARARAPCIVYIDEID 108 (262)
T ss_dssp ESCTTSSHHHHHHHHHHHHTCCEEEEETTTTSSSSTTHH-HHHHHHHHHHHHHTCSEEEEEECC-
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEechHHHHhhccChh-HHHHHHHHHHHHhcCCeEEEEeCcc
Confidence 37889998888888888888776665433331 12211 1122233444444556788888743
No 39
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=25.65 E-value=41 Score=23.84 Aligned_cols=25 Identities=12% Similarity=0.255 Sum_probs=20.1
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceE
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTV 25 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~i 25 (188)
+-|+-|||=+.+-..+++.+|...+
T Consensus 12 l~G~~GsGKSTva~~La~~lg~~~i 36 (168)
T 1zuh_A 12 LIGFMGSGKSSLAQELGLALKLEVL 36 (168)
T ss_dssp EESCTTSSHHHHHHHHHHHHTCCEE
T ss_pred EECCCCCCHHHHHHHHHHHhCCCEE
Confidence 3589999999988888888886544
No 40
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=25.52 E-value=1.9e+02 Score=23.71 Aligned_cols=61 Identities=18% Similarity=0.162 Sum_probs=33.9
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEEeecCCCc--hhHHhHHHHHHHHHHHHhcCCEEEEEeCh
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPFSF--EGRRRAVQAQEGIASLRDNVDTLIVIPND 63 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isivt~Pf~~--Eg~~~~~nA~~~l~~L~~~~D~vividN~ 63 (188)
-|-+|||=+.++..++++.+...+.+-..-+.. -|... ..-...++......-.++++|.=
T Consensus 154 ~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~-~~~~~~~~~a~~~~~~il~iDEi 216 (389)
T 3vfd_A 154 FGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE-KLVRALFAVARELQPSIIFIDQV 216 (389)
T ss_dssp ESSTTSCHHHHHHHHHHHTTCEEEEECSCCC-------CH-HHHHHHHHHHHHSSSEEEEEETG
T ss_pred ECCCCCCHHHHHHHHHHhhcCcEEEeeHHHhhccccchHH-HHHHHHHHHHHhcCCeEEEEECc
Confidence 488999998888888998887766653322211 11110 11112223333444578889874
No 41
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=25.51 E-value=63 Score=24.77 Aligned_cols=25 Identities=28% Similarity=0.104 Sum_probs=17.9
Q ss_pred CCcCCchHHHHHHHHHHcCCceEEE
Q 029771 3 GGTGTGGAPVIAGVAKSMGILTVGI 27 (188)
Q Consensus 3 GGTGsG~~p~ia~~a~~~~~~~isi 27 (188)
||||+|++.-+++..-+.|..++.+
T Consensus 29 Gasg~GIG~~~a~~l~~~G~~V~~~ 53 (266)
T 3o38_A 29 AAAGTGIGSTTARRALLEGADVVIS 53 (266)
T ss_dssp SCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCchHHHHHHHHHHCCCEEEEe
Confidence 7888999887776665668765544
No 42
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=25.43 E-value=1.1e+02 Score=22.45 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHh-cCCEEEEE
Q 029771 10 APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD-NVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~-~~D~vivi 60 (188)
+|.+++.+++.|..+......|.. |... ..+++..+ .+|.+|.-
T Consensus 29 ~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~------~al~~a~~~~~DlVitt 73 (164)
T 3pzy_A 29 GPIITEWLAQQGFSSAQPEVVADG-SPVG------EALRKAIDDDVDVILTS 73 (164)
T ss_dssp HHHHHHHHHHTTCEECCCEEECSS-HHHH------HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCH-HHHH------HHHHHHHhCCCCEEEEC
Confidence 678888888888766655566776 5432 23444443 68877765
No 43
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=25.25 E-value=2e+02 Score=23.89 Aligned_cols=53 Identities=23% Similarity=0.265 Sum_probs=37.3
Q ss_pred HHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChhh
Q 029771 13 IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDKL 65 (188)
Q Consensus 13 ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~L 65 (188)
+.+...++|.....+...+..+.++.|..|+...++.|.+.---.|+-.|+.+
T Consensus 87 ~~~~l~~~G~~~~qvllt~~d~~~~~r~~n~~~~i~~LL~~g~IPIv~end~v 139 (367)
T 2j5v_A 87 WEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAV 139 (367)
T ss_dssp HHHHHHTTTCCEEEEEECGGGGSSHHHHHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred HHHHHHHcCCceEEEEEecccccCceEEEhHHHHHHHHHHCCCEEEECCCCce
Confidence 34445567877666665666677788888999999999876655566567655
No 44
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=24.59 E-value=35 Score=26.44 Aligned_cols=24 Identities=29% Similarity=0.396 Sum_probs=20.0
Q ss_pred CCCCcCCchHHHHHHHHHHcCCce
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILT 24 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~ 24 (188)
++|+.|||-+.+-..+|+++|...
T Consensus 19 i~g~~gsGk~~i~~~la~~lg~~~ 42 (223)
T 3hdt_A 19 IEREYGSGGRIVGKKLAEELGIHF 42 (223)
T ss_dssp EEECTTSCHHHHHHHHHHHHTCEE
T ss_pred EeCCCCCCHHHHHHHHHHHcCCcE
Confidence 368899999999989999988643
No 45
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=23.82 E-value=51 Score=23.67 Aligned_cols=25 Identities=24% Similarity=0.410 Sum_probs=20.1
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceE
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTV 25 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~i 25 (188)
+.|+.|||=+.+-..+++.+|...+
T Consensus 7 l~G~~GsGKsT~a~~La~~lg~~~i 31 (184)
T 2iyv_A 7 LVGLPGSGKSTIGRRLAKALGVGLL 31 (184)
T ss_dssp EECSTTSSHHHHHHHHHHHHTCCEE
T ss_pred EECCCCCCHHHHHHHHHHHcCCCEE
Confidence 3589999998888888888886554
No 46
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=23.34 E-value=1.6e+02 Score=23.38 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=34.9
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEEeecCC--CchhHHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGIVTTPF--SFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isivt~Pf--~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~ 64 (188)
-|-.|||=+.+...++++.+...+.+-...+ .+-|..+ .+-..-++...+..-+++++|.=.
T Consensus 57 ~GppGtGKT~la~aia~~~~~~~~~v~~~~l~~~~~g~~~-~~~~~~f~~a~~~~~~vl~iDEid 120 (322)
T 3eie_A 57 YGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESE-KLVKQLFAMARENKPSIIFIDQVD 120 (322)
T ss_dssp ECSSSSCHHHHHHHHHHHHTCEEEEEEHHHHHTTTGGGHH-HHHHHHHHHHHHTSSEEEEEECGG
T ss_pred ECCCCCcHHHHHHHHHHHHCCCEEEEchHHHhhcccchHH-HHHHHHHHHHHhcCCeEEEechhh
Confidence 4889999888888888888877666532211 1111111 111122333344455788898743
No 47
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=22.92 E-value=1.3e+02 Score=21.89 Aligned_cols=45 Identities=16% Similarity=0.242 Sum_probs=28.2
Q ss_pred HHHHHHH----HHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHh-cCCEEEEE
Q 029771 10 APVIAGV----AKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRD-NVDTLIVI 60 (188)
Q Consensus 10 ~p~ia~~----a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~-~~D~vivi 60 (188)
+|.+++. +++.|..+....+.|...|.. ...+++..+ .+|.+|.-
T Consensus 27 ~~~l~~~~~~~l~~~G~~v~~~~iv~Dd~~~I------~~~l~~a~~~~~DlVitt 76 (167)
T 2g2c_A 27 LPLLQRLMSDELQDYSYELISEVVVPEGYDTV------VEAIATALKQGARFIITA 76 (167)
T ss_dssp HHHHHHHHCC----CEEEEEEEEEECSSHHHH------HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhHHhHHHHCCCEEeEEEEeCCCHHHH------HHHHHHHHhCCCCEEEEC
Confidence 6888888 888887777777778765543 234555555 48887764
No 48
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=22.80 E-value=67 Score=26.25 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=35.4
Q ss_pred CCch-HHHHHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEE
Q 029771 6 GTGG-APVIAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVI 60 (188)
Q Consensus 6 GsG~-~p~ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vivi 60 (188)
|.|. +.-+|+.++.+|..+++.=..|...++..+. .....++++.+.+|.+++-
T Consensus 146 G~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~-~~~~~l~ell~~aDiV~l~ 200 (315)
T 3pp8_A 146 GAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY-VGREELRAFLNQTRVLINL 200 (315)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE-ESHHHHHHHHHTCSEEEEC
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh-cccCCHHHHHhhCCEEEEe
Confidence 6665 6778899998998777765555543332111 1125678888899988765
No 49
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=22.60 E-value=1e+02 Score=22.08 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=26.3
Q ss_pred HHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeC
Q 029771 13 IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPN 62 (188)
Q Consensus 13 ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN 62 (188)
+++.+|+.|+.+++|...|.+ .|.+.+|.++.++.
T Consensus 115 ~~~~ak~~g~~vi~IT~~~~s---------------~la~~ad~~l~~~~ 149 (183)
T 2xhz_A 115 LIPVLKRLHVPLICITGRPES---------------SMARAADVHLCVKV 149 (183)
T ss_dssp HHHHHHTTTCCEEEEESCTTS---------------HHHHHSSEEEECCC
T ss_pred HHHHHHHCCCCEEEEECCCCC---------------hhHHhCCEEEEeCC
Confidence 367888889999988655442 35678999998885
No 50
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=22.55 E-value=74 Score=23.47 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=21.8
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEE
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGI 27 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isi 27 (188)
-|+.|||=+.+...++++++...++.
T Consensus 6 ~G~~GsGKsT~a~~L~~~~~~~~i~~ 31 (216)
T 3dl0_A 6 MGLPGAGKGTQGERIVEKYGIPHIST 31 (216)
T ss_dssp ECSTTSSHHHHHHHHHHHSSCCEEEH
T ss_pred ECCCCCCHHHHHHHHHHHhCCcEEeH
Confidence 48999999999888999998776654
No 51
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=21.93 E-value=58 Score=24.08 Aligned_cols=23 Identities=17% Similarity=0.462 Sum_probs=19.0
Q ss_pred CCCCcCCchHHHHHHHHHHcCCc
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGIL 23 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~ 23 (188)
+.|+.|||=+.+...+++.+|..
T Consensus 8 i~G~~gsGkst~~~~l~~~~g~~ 30 (219)
T 2h92_A 8 LDGPAAAGKSTIAKRVASELSMI 30 (219)
T ss_dssp EECCTTSSHHHHHHHHHHHTTCE
T ss_pred EECCCCCCHHHHHHHHHHhcCCc
Confidence 35899999999888888888853
No 52
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=21.93 E-value=1.2e+02 Score=22.64 Aligned_cols=45 Identities=13% Similarity=0.263 Sum_probs=29.6
Q ss_pred CCchHHH---HHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcC---CEEEEEeChhh
Q 029771 6 GTGGAPV---IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNV---DTLIVIPNDKL 65 (188)
Q Consensus 6 GsG~~p~---ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~---D~vividN~~L 65 (188)
.||-+|- .++.+|+.|+.+++|...|.+ .|.+.+ |.++.++.+.-
T Consensus 123 ~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s---------------~la~~a~~~d~~l~~~~~~~ 173 (201)
T 3trj_A 123 TSGDSENILSAVEEAHDLEMKVIALTGGSGG---------------ALQNMYNTDDIELRVPSDNI 173 (201)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEEEEEETTCC---------------GGGGTCCTTCEEEEESCCCH
T ss_pred CCCCCHHHHHHHHHHHHCCCcEEEEECCCCC---------------HHHHhhccCCEEEEeCCCCc
Confidence 3554442 357777888888888665553 245667 88888887654
No 53
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=21.59 E-value=92 Score=25.00 Aligned_cols=27 Identities=7% Similarity=0.172 Sum_probs=20.0
Q ss_pred CCchHHHHHHHHHHcCCceEEEeecCC
Q 029771 6 GTGGAPVIAGVAKSMGILTVGIVTTPF 32 (188)
Q Consensus 6 GsG~~p~ia~~a~~~~~~~isivt~Pf 32 (188)
|+|.+...+++++..|..++++...|.
T Consensus 154 ~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 180 (340)
T 3gms_A 154 GSAIGHLFAQLSQILNFRLIAVTRNNK 180 (340)
T ss_dssp TSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 445667778999999998777765554
No 54
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=21.35 E-value=1.4e+02 Score=21.46 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=24.1
Q ss_pred HHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeChh
Q 029771 13 IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPNDK 64 (188)
Q Consensus 13 ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~~ 64 (188)
.++.+|+.|+.+++|...|.+ .|.+.+|.++.++.+.
T Consensus 129 ~~~~ak~~g~~vi~iT~~~~s---------------~L~~~ad~~l~~~~~~ 165 (188)
T 1tk9_A 129 ALKKAKELNMLCLGLSGKGGG---------------MMNKLCDHNLVVPSDD 165 (188)
T ss_dssp HHHHHHHTTCEEEEEEEGGGT---------------THHHHCSEEEEESCSC
T ss_pred HHHHHHHCCCEEEEEeCCCCc---------------chHHcCCEEEEeCCCC
Confidence 356777778888877554331 2456688888777554
No 55
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=21.28 E-value=77 Score=23.32 Aligned_cols=26 Identities=15% Similarity=0.203 Sum_probs=21.5
Q ss_pred CCCcCCchHHHHHHHHHHcCCceEEE
Q 029771 2 GGGTGTGGAPVIAGVAKSMGILTVGI 27 (188)
Q Consensus 2 GGGTGsG~~p~ia~~a~~~~~~~isi 27 (188)
-|+.|||=+.+...+++++|...++.
T Consensus 6 ~G~~GsGKsT~a~~L~~~~~~~~i~~ 31 (216)
T 3fb4_A 6 MGLPGAGKGTQAEQIIEKYEIPHIST 31 (216)
T ss_dssp ECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred ECCCCCCHHHHHHHHHHHhCCcEeeH
Confidence 58999999998888989888776653
No 56
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=20.87 E-value=50 Score=23.96 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=18.1
Q ss_pred CCCCcCCchHHHHHHHHHHcCCceE
Q 029771 1 MGGGTGTGGAPVIAGVAKSMGILTV 25 (188)
Q Consensus 1 lGGGTGsG~~p~ia~~a~~~~~~~i 25 (188)
+.|+.|||=+.+...+++. |..++
T Consensus 13 i~G~~GsGKST~~~~La~~-g~~~i 36 (203)
T 1uf9_A 13 ITGNIGSGKSTVAALLRSW-GYPVL 36 (203)
T ss_dssp EEECTTSCHHHHHHHHHHT-TCCEE
T ss_pred EECCCCCCHHHHHHHHHHC-CCEEE
Confidence 3589999998888888876 65443
No 57
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=20.29 E-value=1.2e+02 Score=22.15 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=30.6
Q ss_pred CCchHHH---HHHHHHHcCCceEEEeecCCCchhHHhHHHHHHHHHHHHhcCCEEEEEeCh
Q 029771 6 GTGGAPV---IAGVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIASLRDNVDTLIVIPND 63 (188)
Q Consensus 6 GsG~~p~---ia~~a~~~~~~~isivt~Pf~~Eg~~~~~nA~~~l~~L~~~~D~vividN~ 63 (188)
.||-++- +++.+|+.|+.+++|...|.+ .|.+.+|.++.++..
T Consensus 101 ~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s---------------~l~~~ad~~l~~~~~ 146 (201)
T 3fxa_A 101 KGGNTGELLNLIPACKTKGSTLIGVTENPDS---------------VIAKEADIFFPVSVS 146 (201)
T ss_dssp SSSCCHHHHTTHHHHHHHTCEEEEEESCTTS---------------HHHHHCSEEEECCCS
T ss_pred CCCCCHHHHHHHHHHHHcCCeEEEEECCCCC---------------hhHHhCCEEEEcCCC
Confidence 3554442 368888999999999665543 356789999998764
Done!