BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029772
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1
PE=1 SV=2
Length = 347
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 24 ESTFAS-SPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTS 82
E FA+ +PI P S+ M E +A + +L +E T AA ++ +
Sbjct: 60 EPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLL-------IEKEELKTVAAAKVEQIT 112
Query: 83 YKVQDGAKSCG-GLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRV 141
+Q G S D E +KQ F+ FKK KY + LAK QSPK+MV AC+DSRV
Sbjct: 113 AALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRV 172
Query: 142 CPSYILGLQPGETFMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
CPS++L QPG+ F++RN+AN+VPP + AA+E+AV L+V
Sbjct: 173 CPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKV 219
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1
Length = 328
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 99 EEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIR 158
E +K FL FKK KY + + LAK QSP FMV AC+DSRVCPS++L QPGE F++R
Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181
Query: 159 NVANLVPPLENGP-SETNAALEFAVNTLEVS 188
NVANLVPP + + T AA+E+AV L+VS
Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVS 212
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2
Length = 330
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 154
D E +K F+ FK K+ + LAK QSPKFMV AC+DSRVCPS++L QPGE
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 155 FMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
F++RNVAN+VPP + S AA+E+AV L+V
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 321
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 89/168 (52%), Gaps = 14/168 (8%)
Query: 24 ESTFAS-SPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTS 82
E FA+ +PI P + M E A +L E AA D+ +
Sbjct: 47 EPVFAAPTPIINPILREEMAKESYEQAIAALEKLLS-------EKGELGPIAAARVDQIT 99
Query: 83 YKVQ--DGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSR 140
++Q DG+K D E MK F+ FK KY + + L+K QSPKFMV AC+DSR
Sbjct: 100 AELQSSDGSKP---FDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSR 156
Query: 141 VCPSYILGLQPGETFMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
VCPS++L QPGE F++RN+AN+VP + S AA+E+AV L+V
Sbjct: 157 VCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKV 204
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1
Length = 330
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 154
D E +K F+ FK K+ + LAK QSPKFMV AC+DSRVCPS++L QPGE
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 155 FMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
F++RNVAN+VPP + S AA+E+AV L+V
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1
Length = 330
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 154
D E +K F+ FK K+ + LAK QSPKFMV AC+DSRVCPS++L QPGE
Sbjct: 120 FDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 179
Query: 155 FMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
F++RNVAN+VPP + S AA+E+AV L+V
Sbjct: 180 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1
Length = 329
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 95 LDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 154
D E +K F+ FK K+ + LAK QSPKFMV AC+DSRVCPS++L QPGE
Sbjct: 119 FDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEA 178
Query: 155 FMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
F++RNVAN+VPP + S AA+E+AV L+V
Sbjct: 179 FVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 212
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=CA2
PE=1 SV=2
Length = 259
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 13/132 (9%)
Query: 57 LKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEE 116
LK + +K++ ++ AA + D S+ D E +K+ F++FKK KY
Sbjct: 23 LKDVAAAKVKKITAELQAASSSDSKSF------------DPVERIKEGFVTFKKEKYETN 70
Query: 117 LEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGP-SETN 175
+ LAK QSPK+MV AC+DSRVCPS++L PG+ F++RN+AN+VPP + +
Sbjct: 71 PALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVG 130
Query: 176 AALEFAVNTLEV 187
AA+E+AV L+V
Sbjct: 131 AAIEYAVLHLKV 142
>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 319
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 28 ASSPINRPAGSKTMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQD 87
A +PI P + M E +A +L + +LE ++S A +T + + D
Sbjct: 53 APAPIITPTLKEDMAYE---EAIAALKKLLSEKG--ELENEAASKVAQITSE-----LAD 102
Query: 88 GAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYIL 147
G + +K+ F+ FKK KY + + L+K Q+PKFMV AC+DSRVCPS++L
Sbjct: 103 GGTPSASYP-VQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVL 161
Query: 148 GLQPGETFMIRNVANLVPPLENGP-SETNAALEFAVNTLEV 187
QPGE FM+RN+AN+VP + + AA+E+AV L+V
Sbjct: 162 DFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKV 202
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1
Length = 324
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 99 EEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIR 158
E +K F FK Y ++ + F+ L Q+PK+MV ACADSRVCPS LGL+PGE F IR
Sbjct: 128 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 187
Query: 159 NVANLVPP-LENGPSETNAALEFAVNTLEV 187
N+AN+VP +N + +A+E+AV L+V
Sbjct: 188 NIANMVPAYCKNKYAGVGSAIEYAVCALKV 217
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1
Length = 190
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 120 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEN-GPSETNAAL 178
+ LAK QSPKF+V AC+DSRVCPS+IL QPGE F++RN+AN+VPP + S AA+
Sbjct: 5 YGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAI 64
Query: 179 EFAVNTLEV 187
E+AV L+V
Sbjct: 65 EYAVLHLKV 73
>sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=cynT PE=3 SV=1
Length = 220
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLV 164
FL F+++ Y + F++LA Q+PK + IAC+DSRV P + +PGE F+IRN N+V
Sbjct: 8 FLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIV 67
Query: 165 PPLENGPSETNAALEFAVNTLEVS 188
P P +A++E+AV L V
Sbjct: 68 PGYGPQPGGVSASVEYAVAVLGVG 91
>sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1
SV=1
Length = 219
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 157
+E+ FL F++ + + F+ LA QSP+ + I+C+DSR+ P + +PG+ F+I
Sbjct: 1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI 60
Query: 158 RNVANLVPPLENGPSETNAALEFAVNTLEVS 188
RN N+VP P +A++E+AV L VS
Sbjct: 61 RNAGNIVPSYGPEPGGVSASVEYAVAALRVS 91
>sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1
Length = 219
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 157
+E+ FL F++ + + F+ LA QSP+ + I+C+DSR+ P + +PG+ F+I
Sbjct: 1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVI 60
Query: 158 RNVANLVPPLENGPSETNAALEFAVNTLEVS 188
RN N+VP P +A++E+AV L VS
Sbjct: 61 RNAGNIVPSYGPEPGGVSASVEYAVAALRVS 91
>sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori (strain J99) GN=cynT PE=3
SV=1
Length = 221
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 106 LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVP 165
L F++N+Y E E +++L Q P + I+C DSRV P+ I G QPGE ++IRN+ N++P
Sbjct: 8 LEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIP 67
Query: 166 P 166
P
Sbjct: 68 P 68
>sp|P61518|CAN_SHIFL Carbonic anhydrase 2 OS=Shigella flexneri GN=can PE=3 SV=1
Length = 220
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 7/70 (10%)
Query: 120 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETN--AA 177
F+ LA+AQ P+F+ I C+DSRV + GL+PGE F+ RNVANLV ++ N +
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVI-----HTDLNCLSV 80
Query: 178 LEFAVNTLEV 187
+++AV+ LEV
Sbjct: 81 VQYAVDVLEV 90
>sp|P61517|CAN_ECOLI Carbonic anhydrase 2 OS=Escherichia coli (strain K12) GN=can PE=1
SV=1
Length = 220
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 7/70 (10%)
Query: 120 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETN--AA 177
F+ LA+AQ P+F+ I C+DSRV + GL+PGE F+ RNVANLV ++ N +
Sbjct: 26 FEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVI-----HTDLNCLSV 80
Query: 178 LEFAVNTLEV 187
+++AV+ LEV
Sbjct: 81 VQYAVDVLEV 90
>sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942)
GN=icfA PE=3 SV=1
Length = 272
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 108 FKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPL 167
F+ + Y + F+ AK Q P+ + I C+DSR+ P+ I GE F+IRN NL+PP
Sbjct: 11 FRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPF 70
Query: 168 ENGPSETNAALEFAVNTLEV 187
A++E+A+ L +
Sbjct: 71 GAANGGEGASIEYAIAALNI 90
>sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1805 PE=1
SV=2
Length = 228
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 104 RFLSFKKNKYFE------------ELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQP 151
R+L +K FE + E F LA QSP+++ I C+DSRV + I+GL
Sbjct: 12 RYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDA 71
Query: 152 GETFMIRNVANLVPPLENGPSETNAALEFAVNTLEV 187
GE F+ RN+AN+VP ++ + + + +AV L+V
Sbjct: 72 GEVFVHRNIANVVPTID---LSSMSVINYAVGHLKV 104
>sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=icfA PE=1 SV=1
Length = 274
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 108 FKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPL 167
F++ + + F+ L+ Q P+ + I C+DSRV P+ I + G+ F+IRN N++PP
Sbjct: 11 FREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPY 70
Query: 168 ENGPSETNAALEFAVNTLEVS 188
AA+E+A+ LE++
Sbjct: 71 GAANGGEGAAMEYALVALEIN 91
>sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBP8B7.05c PE=1 SV=2
Length = 328
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 93 GGLDYFEEMK---QRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGL 149
G +D E+K +R L++ + + F Q+P+ + I C+DSRV + IL L
Sbjct: 117 GKIDQNGEIKDLLERNLTWSQQTSRKYPSFFTATKDIQTPQVLWIGCSDSRVPETTILNL 176
Query: 150 QPGETFMIRNVANLVPPLENGPSETN--AALEFAVNTLEV 187
PGE F+ RN+AN+VP S+ N A +E++V L+V
Sbjct: 177 LPGEVFVHRNIANVVP-----RSDINALAVMEYSVTVLKV 211
>sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=can PE=1 SV=1
Length = 229
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 119 HFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETN--A 176
+F+ LA Q+P ++ I C+DSRV + L+PGE F+ RNVAN V ++ N +
Sbjct: 25 YFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVI-----HTDFNCLS 79
Query: 177 ALEFAVNTLEV 187
+++AV+ L++
Sbjct: 80 VVQYAVDVLKI 90
>sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=cynT PE=3 SV=1
Length = 221
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 106 LSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVP 165
L F++N+Y E E +++L Q P + I+C DSRV P+ I G +PGE ++I N+ N+ P
Sbjct: 8 LEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNP 67
Query: 166 P 166
P
Sbjct: 68 P 68
>sp|O53573|MTCA2_MYCTU Carbonic anhydrase 2 OS=Mycobacterium tuberculosis GN=mtcA2 PE=1
SV=1
Length = 207
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 157
+E +RF++ + + ++H LA Q P ++ CADSRV I G+ F++
Sbjct: 13 LKEGNERFVAGRPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVV 72
Query: 158 RNVANLVPPLENGPSETNAALEFAVNTLEV 187
R +++ S ++E+AV L V
Sbjct: 73 RTAGHVI------DSAVLGSIEYAVTVLNV 96
>sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=NCE103 PE=1 SV=1
Length = 221
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 124 AKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVN 183
AK QSP + I C+DSR LG+ PGE F +NVAN+ + A LEFA+
Sbjct: 45 AKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANIC---HSEDLTLKATLEFAII 100
Query: 184 TLEVS 188
L+V+
Sbjct: 101 CLKVN 105
>sp|Q22460|BCA1_CAEEL Beta carbonic anhydrase 1 OS=Caenorhabditis elegans GN=bca-1 PE=3
SV=1
Length = 270
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 117 LEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVP--PLENGPSET 174
++ F+ + SP ++ C DSR+ P+ Q G+ F++RN N++P P SE
Sbjct: 20 VKQFEEIKNNPSPTAVMFTCMDSRMLPTRFTQSQVGDMFVVRNAGNMIPDAPNYGAFSEV 79
Query: 175 N-----AALEFAV 182
+ AALE AV
Sbjct: 80 SVNTEPAALELAV 92
>sp|A8XKV0|BCA1_CAEBR Beta carbonic anhydrase 1 OS=Caenorhabditis briggsae GN=bca-1 PE=3
SV=2
Length = 270
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 117 LEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETN- 175
++ F++++ +P ++ C DSR+ P+ G+ F++RN N++P N S +
Sbjct: 20 VKQFEHVSDHPNPTAVMFTCMDSRMLPTRFTQSAVGDMFVVRNAGNMIPAAPNYGSYSEV 79
Query: 176 ------AALEFAV 182
AALE AV
Sbjct: 80 SINTEPAALELAV 92
>sp|A0R566|CYNT_MYCS2 Carbonic anhydrase OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=cynT PE=1 SV=1
Length = 206
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 98 FEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 157
++ RF++ + + +E +L +AQ P +V C DSRV + G+ F++
Sbjct: 13 LKDGNARFVAGQPLHPSQGIERRASLTQAQRPTAVVFGCGDSRVAAEILFDQGLGDMFVV 72
Query: 158 RNVANLVPPLENGPSETNAALEFAVNTLEV 187
R +++ + ++E+AV L+V
Sbjct: 73 RTAGHVI------DNAVLGSIEYAVTVLKV 96
>sp|Q7MX26|RPOC_PORGI DNA-directed RNA polymerase subunit beta' OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=rpoC PE=3 SV=1
Length = 1433
Score = 33.5 bits (75), Expect = 0.92, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 39 KTMKLEKIRDAQQGF-TPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDY 97
K +K+ K+RDA+ + +L+ + + L+T S +AA+ + + KV + A CG DY
Sbjct: 1317 KDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASF---QETTKVLNEAAICGKTDY 1373
Query: 98 FEEMKQRFL 106
E +K+ +
Sbjct: 1374 LEGLKENVI 1382
>sp|B2RL44|RPOC_PORG3 DNA-directed RNA polymerase subunit beta' OS=Porphyromonas gingivalis
(strain ATCC 33277 / DSM 20709 / JCM 12257) GN=rpoC PE=3
SV=1
Length = 1433
Score = 33.5 bits (75), Expect = 0.92, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 39 KTMKLEKIRDAQQGF-TPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDY 97
K +K+ K+RDA+ + +L+ + + L+T S +AA+ + + KV + A CG DY
Sbjct: 1317 KDLKIVKVRDAKSATASQILQGITRAALQTKSFMSAASF---QETTKVLNEAAICGKTDY 1373
Query: 98 FEEMKQRFL 106
E +K+ +
Sbjct: 1374 LEGLKENVI 1382
>sp|Q6GNK9|NDNF_XENLA Protein NDNF OS=Xenopus laevis GN=ndnf PE=2 SV=1
Length = 569
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 60 RSFSKLETSSSSTAAAL-TRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSF--------KK 110
++F KL T SS+T A L T++R + + K DY EE K+R + K
Sbjct: 455 KAFDKLRTCSSATVAWLGTQERNKFCI---YKKEVDDDYTEEHKKRDQNQCLGPDTRKKS 511
Query: 111 NKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 157
K + H QN+ KA V I GLQPG+++M+
Sbjct: 512 EKVLCKYFHSQNIHKA--------------VTTETIKGLQPGKSYML 544
>sp|A4IIK7|NDNF_XENTR Protein NDNF OS=Xenopus tropicalis GN=ndnf PE=2 SV=2
Length = 570
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 26/107 (24%)
Query: 60 RSFSKLETSSSSTAAAL-TRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSF--------KK 110
++F KL T SS T A L T++R + V K DY EE K+R + K
Sbjct: 456 KAFDKLRTCSSVTVAWLGTQERNKFCV---YKKEVDDDYTEEHKKREQNQCLGPDTRKKT 512
Query: 111 NKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMI 157
K + H QN+ KA V I GLQPG+++M+
Sbjct: 513 EKVLCKYFHSQNIHKA--------------VTTETIKGLQPGKSYML 545
>sp|C7YGZ0|VPS10_NECH7 Vacuolar protein sorting/targeting protein 10 OS=Nectria
haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596
/ MPVI) GN=VPS10 PE=3 SV=1
Length = 1516
Score = 30.4 bits (67), Expect = 8.0, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 61 SFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLD 96
+F L SSTA LT+DR YK +D KS D
Sbjct: 86 AFLYLHPFESSTAFVLTKDRKHYKTEDRGKSWTEFD 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.127 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,511,559
Number of Sequences: 539616
Number of extensions: 2129930
Number of successful extensions: 6078
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6048
Number of HSP's gapped (non-prelim): 38
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)