Query 029772
Match_columns 188
No_of_seqs 183 out of 1111
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 03:25:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029772.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029772hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03019 carbonic anhydrase 100.0 1.2E-37 2.6E-42 277.4 11.9 140 43-188 75-215 (330)
2 PLN03014 carbonic anhydrase 100.0 1.3E-37 2.9E-42 278.6 11.0 143 40-188 77-220 (347)
3 PLN03006 carbonate dehydratase 100.0 3.2E-36 6.9E-41 265.9 7.4 136 47-188 36-172 (301)
4 PLN00416 carbonate dehydratase 100.0 1.4E-34 3E-39 251.1 11.1 138 42-188 2-140 (258)
5 PLN02154 carbonic anhydrase 100.0 1.1E-28 2.4E-33 217.1 10.4 110 75-188 57-166 (290)
6 COG0288 CynT Carbonic anhydras 99.9 2.4E-28 5.2E-33 206.0 8.3 90 96-188 2-92 (207)
7 cd00883 beta_CA_cladeA Carboni 99.9 6.7E-28 1.5E-32 198.8 7.0 81 105-188 1-81 (182)
8 PRK15219 carbonic anhydrase; P 99.9 1.9E-27 4.2E-32 205.1 9.4 90 92-188 51-143 (245)
9 PRK10437 carbonic anhydrase; P 99.9 2.1E-27 4.5E-32 202.2 8.2 89 97-188 3-91 (220)
10 cd00884 beta_CA_cladeB Carboni 99.9 2.7E-27 5.8E-32 197.1 6.8 85 104-188 1-87 (190)
11 cd03378 beta_CA_cladeC Carboni 99.9 7E-26 1.5E-30 183.6 8.5 88 95-188 2-92 (154)
12 KOG1578 Predicted carbonic anh 99.9 4.9E-25 1.1E-29 191.9 5.0 130 40-188 24-154 (276)
13 cd00382 beta_CA Carbonic anhyd 99.8 1.5E-21 3.3E-26 151.3 5.8 59 127-188 1-59 (119)
14 cd03379 beta_CA_cladeD Carboni 99.8 1.2E-19 2.6E-24 144.2 5.1 56 127-188 1-56 (142)
15 PF00484 Pro_CA: Carbonic anhy 99.8 1.2E-19 2.6E-24 143.6 4.3 55 131-188 1-55 (153)
16 KOG1578 Predicted carbonic anh 95.2 0.00078 1.7E-08 59.7 -5.1 64 101-167 3-82 (276)
17 KOG2882 p-Nitrophenyl phosphat 29.4 85 0.0018 28.7 4.3 48 117-183 168-216 (306)
18 KOG4780 Uncharacterized conser 20.4 47 0.001 31.8 0.9 33 135-167 390-422 (467)
No 1
>PLN03019 carbonic anhydrase
Probab=100.00 E-value=1.2e-37 Score=277.42 Aligned_cols=140 Identities=36% Similarity=0.613 Sum_probs=128.5
Q ss_pred hhhHHHHHHhhHHHhhhccccccccccccchhhhhHHhhcccccCCCCCCcHHHHHHHHHHHHHHhhhhccccchHHHHh
Q 029772 43 LEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQN 122 (188)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~t~~l~~~~~~~~~~~~~~~~~l~~Ll~gn~~F~~~~~~~~~~~~~~ 122 (188)
.+.+|++|.+|.++|++|.+++.+|+ +|+.++|+||+..... ...++++|++|++||++|+...+.+++++|..
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~l~~~~~~----~~~~~~ale~Ll~GN~rF~~~~~~~~p~~~~~ 148 (330)
T PLN03019 75 NESYEDAIEALKKLLIEKDDLKDVAA--AKVKKITAELQAASSS----DSKSFDPVERIKEGFVTFKKEKYETNPALYGE 148 (330)
T ss_pred hhhHHHHHHHHHhhcccccccchHHH--HHHHHhhHHhhhccCC----CCchhHHHHHHHHHHHHHHhccccccHHHHHh
Confidence 34689999999999999999999999 9999999999975431 24579999999999999999998899999999
Q ss_pred hhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCC-CCcchhHHHHHHHhhcCCC
Q 029772 123 LAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEN-GPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 123 la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~-~~~s~~aSLEYAV~~L~V~ 188 (188)
++.+|+|+++||+||||||+|+.|||++|||+||+||+||+|+++|. .+.++.++|||||.+|||+
T Consensus 149 La~gQ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~p~d~~~~~~v~aSIEYAV~~L~V~ 215 (330)
T PLN03019 149 LAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVE 215 (330)
T ss_pred hccCCCCCEEEEEecccCCCHHHHhCCCCCceEEEeccccccCCcccccccccchhHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999875 3457899999999999985
No 2
>PLN03014 carbonic anhydrase
Probab=100.00 E-value=1.3e-37 Score=278.56 Aligned_cols=143 Identities=37% Similarity=0.598 Sum_probs=129.6
Q ss_pred hhhhhhHHHHHHhhHHHhhhccccccccccccchhhhhHHhhcccccCCCCCCcHHHHHHHHHHHHHHhhhhccccchHH
Q 029772 40 TMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEH 119 (188)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~t~~l~~~~~~~~~~~~~~~~~l~~Ll~gn~~F~~~~~~~~~~~ 119 (188)
.|..+.+|++|.+|+++|++|.+++.+|+ +|++++|+||+..... ...++++|++|++||++|+.+.+.+++++
T Consensus 77 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~----~~~~~~~lerL~~GN~rF~~~~~~~~~~~ 150 (347)
T PLN03014 77 EMGTEAYDEAIEALKKLLIEKEELKTVAA--AKVEQITAALQTGTSS----DKKAFDPVETIKQGFIKFKKEKYETNPAL 150 (347)
T ss_pred hhchhhHHHHHHHHHhhcccccccchHHH--HhHHHHHHHHhcccCC----CCCCcCHHHHHHHHHHHHHhhccccCHHH
Confidence 34455699999999999999999999999 9999999999974321 13568999999999999999999999999
Q ss_pred HHhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCC-CCcchhHHHHHHHhhcCCC
Q 029772 120 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEN-GPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 120 ~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~-~~~s~~aSLEYAV~~L~V~ 188 (188)
|.++++||+|+++||+|+||||+|+.|||++|||+||+||+||+|+++|. .+.++.++|||||.+|||+
T Consensus 151 ~~~La~GQ~P~alvI~CsDSRV~Pe~Ifd~~pGDlFVvRNaGNiV~~~d~~~~~~v~asLEYAV~~L~V~ 220 (347)
T PLN03014 151 YGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVE 220 (347)
T ss_pred HHhhccCCCCCEEEEEeccCCCCHHHHhCCCCCcEEEEeccccccCcccccccccchhHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999874 3457999999999999985
No 3
>PLN03006 carbonate dehydratase
Probab=100.00 E-value=3.2e-36 Score=265.93 Aligned_cols=136 Identities=51% Similarity=0.892 Sum_probs=121.2
Q ss_pred HHHHHhhHHHhhhcc-ccccccccccchhhhhHHhhcccccCCCCCCcHHHHHHHHHHHHHHhhhhccccchHHHHhhhh
Q 029772 47 RDAQQGFTPVLKRRS-FSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAK 125 (188)
Q Consensus 47 ~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~t~~l~~~~~~~~~~~~~~~~~l~~Ll~gn~~F~~~~~~~~~~~~~~la~ 125 (188)
.-++.+|...+|++. ++..+|+ +|+++||+||+.... +...+++++++|++||+.|+..++.+++++|.+|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~a~--~~~~~~~~~~~~~~~----~~~~~~~~~~~L~~rf~~f~~~~~~~~~~~~~~La~ 109 (301)
T PLN03006 36 KTTQLRIPASFRRKATNLQVMAS--GKTPGLTQEANGVAI----DRQNNTDVFDDMKQRFLAFKKLKYMDDFEHYKNLAD 109 (301)
T ss_pred ceeEecccccccccccchhhhhh--hchHHHHHHHhhccC----CCCCcccHHHHHHHHHHhchhhccccCHHHHHHhcc
Confidence 346778877776654 7779999 999999999986442 223478999999999999999999999999999999
Q ss_pred cCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhHHHHHHHhhcCCC
Q 029772 126 AQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 126 gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~aSLEYAV~~L~V~ 188 (188)
||+|+++||+||||||+|+.|||++|||+||+||+||+|+++|.+..++.++|||||.+|||+
T Consensus 110 GQ~P~~lvI~CsDSRV~Pe~Ifd~~pGDlFVVRNaGNiVpp~d~~~~~~~aSLEYAV~~L~V~ 172 (301)
T PLN03006 110 AQAPKFLVIACADSRVCPSAVLGFQPGDAFTVRNIANLVPPYESGPTETKAALEFSVNTLNVE 172 (301)
T ss_pred CCCCCEEEEEeccCCCCHHHHhCCCCCCEEEEeccccccCCccccccchhhhHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999998865567999999999999996
No 4
>PLN00416 carbonate dehydratase
Probab=100.00 E-value=1.4e-34 Score=251.13 Aligned_cols=138 Identities=40% Similarity=0.656 Sum_probs=127.7
Q ss_pred hhhhHHHHHHhhHHHhhhccccccccccccchhhhhHHhhcccccCCCCCCcHHHHHHHHHHHHHHhhhhccccchHHHH
Q 029772 42 KLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQ 121 (188)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~t~~l~~~~~~~~~~~~~~~~~l~~Ll~gn~~F~~~~~~~~~~~~~ 121 (188)
-.+.+++++.+|.++|+.++.++.+++ .+..-++..|+.+. ..+.++|+.|++||++|+...+.+++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~al~~Ll~Gn~rF~~~~~~~~~~~~~ 72 (258)
T PLN00416 2 ATESYEAAIKGLNDLLSTKADLGNVAA--AKIKALTAELKELD-------SSNSDAIERIKTGFTQFKTEKYLKNSTLFN 72 (258)
T ss_pred CcccHHHHHHHHHhhcccccccchHHH--HhHHHHHHHHHHhh-------cCHHHHHHHHHHHHHHHHhcccccCHHHHH
Confidence 345689999999999999999999999 99999999999976 358899999999999999998888899999
Q ss_pred hhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCC-CCcchhHHHHHHHhhcCCC
Q 029772 122 NLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEN-GPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 122 ~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~-~~~s~~aSLEYAV~~L~V~ 188 (188)
.++.+|+|+++|||||||||+|+.|||.+|||+||+||+||+|+++|. +..++.++|||||.+|||+
T Consensus 73 ~la~gQ~P~alvI~CsDSRV~pe~If~~~pGDlFVvRNaGNiV~~~d~~~~~~~~asLEyAv~~L~V~ 140 (258)
T PLN00416 73 HLAKTQTPKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPFDQKRHSGVGAAVEYAVVHLKVE 140 (258)
T ss_pred hhccCCCCCEEEEEecCCCCCHHHHcCCCCCCEEEEeccccccCCccccccccchhHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999874 3357899999999999985
No 5
>PLN02154 carbonic anhydrase
Probab=99.95 E-value=1.1e-28 Score=217.13 Aligned_cols=110 Identities=58% Similarity=1.003 Sum_probs=98.6
Q ss_pred hhhHHhhcccccCCCCCCcHHHHHHHHHHHHHHhhhhccccchHHHHhhhhcCCCcEEEEeccCCCCCcccccCCCCCce
Q 029772 75 ALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGET 154 (188)
Q Consensus 75 ~~t~~l~~~~~~~~~~~~~~~~~l~~Ll~gn~~F~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDl 154 (188)
+++.+|.... .++....+.|++|++||++|+..++.++++.|+.|+.+|+|+++||+|+||||+|+.|||.+|||+
T Consensus 57 ~~~~~~~~~~----~~~~~~~~~l~~Ll~gf~~f~~~~~~~~~e~f~~La~GQ~P~~lvi~C~DSRV~pe~if~~~pGdl 132 (290)
T PLN02154 57 GIREEFMDLN----RETETSYDFLDEMRHRFLKFKRQKYLPEIEKFKALAIAQSPKVMVIGCADSRVCPSYVLGFQPGEA 132 (290)
T ss_pred hhhHHHHhcc----cCcchhHHHHHHHHHHHHHHhhccccccHHHHHHhccCCCCCEEEEEecCCCCCHHHHcCCCCCCE
Confidence 3555554433 245678899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccccCCCCCCCCcchhHHHHHHHhhcCCC
Q 029772 155 FMIRNVANLVPPLENGPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 155 FVvRNaGNiV~~~d~~~~s~~aSLEYAV~~L~V~ 188 (188)
||+||+||+|++++.++.++.++|||||.+|+|+
T Consensus 133 FvvRN~GNiv~~~~~g~~~~~aslEyAv~~L~v~ 166 (290)
T PLN02154 133 FTIRNVANLVTPVQNGPTETNSALEFAVTTLQVE 166 (290)
T ss_pred EEEeccCCccCCccCCccchhhHHHHHHHHhCCC
Confidence 9999999999998766668999999999999986
No 6
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=99.95 E-value=2.4e-28 Score=206.02 Aligned_cols=90 Identities=38% Similarity=0.617 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHhhhhccccchHHHHhhhh-cCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcch
Q 029772 96 DYFEEMKQRFLSFKKNKYFEELEHFQNLAK-AQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSET 174 (188)
Q Consensus 96 ~~l~~Ll~gn~~F~~~~~~~~~~~~~~la~-gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~ 174 (188)
..+++|++||.+|.+..+..++.+|..++. +|+|+++|||||||||+||.+||.+|||+||+||+||+|++++ .++
T Consensus 2 ~~~~~ll~gn~~f~~~~~~~~~~~~~~l~~~~Q~P~~lii~C~DSRv~~e~i~~~~pGdlfV~RNaGniV~~~~---~~~ 78 (207)
T COG0288 2 SALKDLLAGNQRFAEGKFPEQSALFRKLADKGQSPKALIITCSDSRVPPELITGLGPGDLFVIRNAGNIVTHPD---GSV 78 (207)
T ss_pred cHHHHHHHHHHHHHhcccccchHHHHHHhccCCCCcEEEEEEccCCCCHHHHhCCCCccEEEEeecccccCCCc---cch
Confidence 468999999999999988888999988765 5999999999999999999999999999999999999999875 589
Q ss_pred hHHHHHHHhhcCCC
Q 029772 175 NAALEFAVNTLEVS 188 (188)
Q Consensus 175 ~aSLEYAV~~L~V~ 188 (188)
++||||||.+|||+
T Consensus 79 l~sleyAv~~L~v~ 92 (207)
T COG0288 79 LRSLEYAVYVLGVK 92 (207)
T ss_pred hHHHHHHHHHcCCC
Confidence 99999999999996
No 7
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.94 E-value=6.7e-28 Score=198.83 Aligned_cols=81 Identities=41% Similarity=0.687 Sum_probs=76.1
Q ss_pred HHHhhhhccccchHHHHhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhHHHHHHHhh
Q 029772 105 FLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNT 184 (188)
Q Consensus 105 n~~F~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~aSLEYAV~~ 184 (188)
|++|....+.+.+++|+.++.+|+|+++|||||||||+|+.|||.+|||+||+||+||+|++.+ .++.+||||||.+
T Consensus 1 n~~f~~~~~~~~~~~~~~l~~gQ~P~~~vi~CsDSRv~pe~if~~~~GdlFViRnaGN~v~~~~---~~~~asleyAv~~ 77 (182)
T cd00883 1 NRAWAEEKKAKDPDFFPRLAKGQTPEYLWIGCSDSRVPENTILGLLPGEVFVHRNIANLVSPTD---LNCLSVLQYAVDV 77 (182)
T ss_pred ChhhhhhccccCHHHHHHhhcCCCCCEEEEEecCCCCCHHHhcCCCCCCEEEEEeeccccCCCC---cchhhhHHHHHHh
Confidence 5788888888899999999999999999999999999999999999999999999999999865 4799999999999
Q ss_pred cCCC
Q 029772 185 LEVS 188 (188)
Q Consensus 185 L~V~ 188 (188)
|||+
T Consensus 78 L~v~ 81 (182)
T cd00883 78 LKVK 81 (182)
T ss_pred cCCC
Confidence 9986
No 8
>PRK15219 carbonic anhydrase; Provisional
Probab=99.94 E-value=1.9e-27 Score=205.12 Aligned_cols=90 Identities=26% Similarity=0.315 Sum_probs=79.7
Q ss_pred CcHHHHHHHHHHHHHHhhhhccccchHHH---HhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCC
Q 029772 92 CGGLDYFEEMKQRFLSFKKNKYFEELEHF---QNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLE 168 (188)
Q Consensus 92 ~~~~~~l~~Ll~gn~~F~~~~~~~~~~~~---~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d 168 (188)
-.+.++|++|++||++|.+..+. .++++ ..+++||+|+++||+||||||+||.|||.+|||+||+||+||+|++
T Consensus 51 ~~p~~al~~L~~GN~rF~~~~~~-~~~~~~~~~~la~gQ~P~a~vi~CsDSRV~pe~ifd~~~GdlFvvRnaGN~v~~-- 127 (245)
T PRK15219 51 MTPDQIIESLKQGNKRFRSGKPA-QHDYLAQKRASAAGQYPAAVILSCIDSRAPAEIILDTGIGETFNSRVAGNISND-- 127 (245)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcC-CchhhHHhhhhccCCCCeEEEEecccCCCCHHHHhCCCCCcEEEEeccccccCc--
Confidence 35788999999999999998764 33333 2467899999999999999999999999999999999999999975
Q ss_pred CCCcchhHHHHHHHhhcCCC
Q 029772 169 NGPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 169 ~~~~s~~aSLEYAV~~L~V~ 188 (188)
++.+||||||.+|||+
T Consensus 128 ----~~~~slEyAv~~L~v~ 143 (245)
T PRK15219 128 ----DLLGSMEFACAVAGAK 143 (245)
T ss_pred ----chhhHHHHHHHHcCCC
Confidence 6899999999999986
No 9
>PRK10437 carbonic anhydrase; Provisional
Probab=99.94 E-value=2.1e-27 Score=202.18 Aligned_cols=89 Identities=37% Similarity=0.556 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhhhhccccchHHHHhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhH
Q 029772 97 YFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNA 176 (188)
Q Consensus 97 ~l~~Ll~gn~~F~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~a 176 (188)
.+++|++||++|....+..++++|+.++.+|+|+++|||||||||+|+.|||.+|||+||+||+||+|++.| .++.+
T Consensus 3 ~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~~q~p~~~~i~C~DSRv~p~~i~~~~~Gd~fv~Rn~gn~v~~~~---~~~~~ 79 (220)
T PRK10437 3 DIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCLS 79 (220)
T ss_pred hHHHHHHHHHHHHHhhhccChHHHHhcccCCCCCEEEEEecccCCCHHHhcCCCCCcEEEEeecccccCCCC---cchHH
Confidence 478999999999998888889999999999999999999999999999999999999999999999999865 47899
Q ss_pred HHHHHHhhcCCC
Q 029772 177 ALEFAVNTLEVS 188 (188)
Q Consensus 177 SLEYAV~~L~V~ 188 (188)
+|||||.+|||+
T Consensus 80 ~leyAV~~L~v~ 91 (220)
T PRK10437 80 VVQYAVDVLEVE 91 (220)
T ss_pred HHHHHHHHcCCC
Confidence 999999999985
No 10
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.94 E-value=2.7e-27 Score=197.12 Aligned_cols=85 Identities=54% Similarity=0.825 Sum_probs=78.7
Q ss_pred HHHHhhhhccccchHHHHhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCC--CCcchhHHHHHH
Q 029772 104 RFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEN--GPSETNAALEFA 181 (188)
Q Consensus 104 gn~~F~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~--~~~s~~aSLEYA 181 (188)
||++|+...+.+++++|++++.+|+|+++||+||||||+|+.|||.+|||+||+||+||+|++++. ++.++.++||||
T Consensus 1 G~~~f~~~~~~~~~~~~~~l~~gQ~P~~~~i~C~DsRv~~~~i~~~~~Gd~fv~Rn~gn~v~~~~~~~~~~~~~asleya 80 (190)
T cd00884 1 GFRRFRKEYFPEERELFEKLAKGQSPKALFIACSDSRVVPALITQTQPGELFVVRNVGNLVPPYEPDGGFHGTSAAIEYA 80 (190)
T ss_pred ChHHHHhhhhhhhHHHHHHhccCCCCCeEEEeeeCCCCCHHHHcCCCCCCEEEEeccCCcCCcccccccccchhhhHHHH
Confidence 688898888888899999999999999999999999999999999999999999999999999754 446899999999
Q ss_pred HhhcCCC
Q 029772 182 VNTLEVS 188 (188)
Q Consensus 182 V~~L~V~ 188 (188)
|.+|+|+
T Consensus 81 v~~l~v~ 87 (190)
T cd00884 81 VAVLKVE 87 (190)
T ss_pred HHHhCCC
Confidence 9999985
No 11
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.93 E-value=7e-26 Score=183.59 Aligned_cols=88 Identities=32% Similarity=0.508 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhhhhcccc---chHHHHhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCC
Q 029772 95 LDYFEEMKQRFLSFKKNKYFE---ELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGP 171 (188)
Q Consensus 95 ~~~l~~Ll~gn~~F~~~~~~~---~~~~~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~ 171 (188)
.+++++|++||++|.+.++.. .++.|..++++|+|+++|||||||||+|+.+||.+|||+||+||+||++++
T Consensus 2 ~~~~~~Ll~gN~~f~~~~~~~~~~~~~~~~~l~~~q~P~~~vitC~DsRv~~~~i~~~~~Gd~fviRn~gn~v~~----- 76 (154)
T cd03378 2 DEALERLKEGNKRFVSGKPLHPDQDLARRRELAKGQKPFAVILSCSDSRVPPEIIFDQGLGDLFVVRVAGNIVDD----- 76 (154)
T ss_pred hHHHHHHHHHHHHHHhcCccCccccHHHHHHhccCCCCcEEEEEcCCCCCCHHHHcCCCCCCEEEEeccccccCh-----
Confidence 478999999999999875421 256688899999999999999999999999999999999999999999987
Q ss_pred cchhHHHHHHHhhcCCC
Q 029772 172 SETNAALEFAVNTLEVS 188 (188)
Q Consensus 172 ~s~~aSLEYAV~~L~V~ 188 (188)
++.++|||||.+|||+
T Consensus 77 -~~~~sl~yav~~l~v~ 92 (154)
T cd03378 77 -DVLGSLEYAVEVLGVP 92 (154)
T ss_pred -hHHHHHHHHHHHhCCC
Confidence 6899999999999985
No 12
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=99.91 E-value=4.9e-25 Score=191.93 Aligned_cols=130 Identities=37% Similarity=0.522 Sum_probs=118.1
Q ss_pred hhhhhhHHHHHHhhHHHhhhccccccccccccchhhhhHHhhcccccCCCCCCcHHHHHHHHHHHHHHhhhhccccchHH
Q 029772 40 TMKLEKIRDAQQGFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEH 119 (188)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~t~~l~~~~~~~~~~~~~~~~~l~~Ll~gn~~F~~~~~~~~~~~ 119 (188)
.|....++..+..+.++|-.+..+ +|+ +++.++|++ .+.++++.++|..|+.+.+.++|..
T Consensus 24 ~mp~~~~~~~~~~dsrml~~r~~~--~~~--~~~~~~~~~---------------~~~~~~i~~~Fv~~~~~~~~~~p~~ 84 (276)
T KOG1578|consen 24 DMPSPTAVMFTCMDSRMLPTRYNL--VAA--AKIKKLTAE---------------FDTLEDIGDMFVVRNSGNYIPNPTL 84 (276)
T ss_pred hCCCHHHHHHHHHHhhccchhhhh--hhh--hhhhhhhhc---------------cchHHHHHhhHhhhccccCCCChhh
Confidence 444566788888888999888888 788 999999983 4678899999999999999999999
Q ss_pred HHhhhhcCCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCC-CCcchhHHHHHHHhhcCCC
Q 029772 120 FQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLEN-GPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 120 ~~~la~gQ~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~-~~~s~~aSLEYAV~~L~V~ 188 (188)
|..++++|+|+.+||+|+||||+|++|++++|||.|++||++|+++|.|+ ++..+.++|||||.+|+|+
T Consensus 85 f~~~~~~qsp~~l~i~csdsRv~~shIL~~~pge~f~irniaNlv~p~~~~~~~~~~AalE~aV~~lkve 154 (276)
T KOG1578|consen 85 FGALAKSQSPEPLALECSDSRVCISHILVCGPGECFAIRNIANLVPPPDKSKPTNVGAALEYAVTTLKVE 154 (276)
T ss_pred hHHHhccCCCcceEEEeccccCCCceEEEecCchHhHHHHHHhccCcccccCcccccchHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999876 5678999999999999985
No 13
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.84 E-value=1.5e-21 Score=151.28 Aligned_cols=59 Identities=51% Similarity=0.916 Sum_probs=56.2
Q ss_pred CCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhHHHHHHHhhcCCC
Q 029772 127 QSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 127 Q~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~aSLEYAV~~L~V~ 188 (188)
|+|+++||||+|||++|+.+||.+|||+||+||+||++++++ .++.+|||||+.+|||+
T Consensus 1 q~p~~~vltC~DsRv~~~~~~~~~~Gd~fv~Rn~Gn~v~~~~---~~~~~sl~~av~~l~v~ 59 (119)
T cd00382 1 QKPKALIIGCSDSRVPPELIFGLGPGDLFVVRNAGNLVPPYD---LDVLASLEYAVEVLGVK 59 (119)
T ss_pred CCCeEEEEEeeCCCCCHHHHhCCCCCCEEEEeccCCcCCCCc---ccHHHHHHHHHHhhCCC
Confidence 799999999999999999999999999999999999999865 58999999999999985
No 14
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=99.78 E-value=1.2e-19 Score=144.23 Aligned_cols=56 Identities=29% Similarity=0.478 Sum_probs=53.1
Q ss_pred CCCcEEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhHHHHHHHhhcCCC
Q 029772 127 QSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 127 Q~P~~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~aSLEYAV~~L~V~ 188 (188)
+.++++|||||||||+|+.+||.+|||+||+||+||+|++ ++.+|||||+.+|||+
T Consensus 1 ~~~~~~vitC~DsRv~~e~i~~~~~GdlfviRnaGn~V~~------~~~~sl~~av~~l~~~ 56 (142)
T cd03379 1 PARKLAIVTCMDARLDPEKALGLKLGDAKVIRNAGGRVTD------DAIRSLVVSVYLLGTR 56 (142)
T ss_pred CCceEEEEEEeCCCCCHHHHcCCCCCcEEEEeccCCccCH------hHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999999999997 6899999999999985
No 15
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=99.78 E-value=1.2e-19 Score=143.64 Aligned_cols=55 Identities=51% Similarity=0.844 Sum_probs=46.6
Q ss_pred EEEEeccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhHHHHHHHhhcCCC
Q 029772 131 FMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVS 188 (188)
Q Consensus 131 ~lvItCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~aSLEYAV~~L~V~ 188 (188)
++||||||||++|+.+||.+|||+||+||+||++++.+ .++.++|||||.+|||+
T Consensus 1 a~vi~C~DsR~~~~~~~~~~~Gd~fviRnaGn~v~~~~---~~~~~sle~av~~l~v~ 55 (153)
T PF00484_consen 1 ALVITCSDSRVPPEEIFGLKPGDLFVIRNAGNRVPPPD---DSALASLEYAVYHLGVK 55 (153)
T ss_dssp EEEEEETTTTSTHHHHHTS-TTSEEEEEETTG---TT----HHHHHHHHHHHHTST-S
T ss_pred CEEEEEcCCCCCHHHHhCCCCcceeeeeEEeeecCccc---cchhhheeeeeecCCCC
Confidence 58999999999999999999999999999999998864 58999999999999985
No 16
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=95.23 E-value=0.00078 Score=59.69 Aligned_cols=64 Identities=22% Similarity=0.448 Sum_probs=52.6
Q ss_pred HHHHHHHhhhhccccchHHHHhhhhcCCCcEEEEeccCCCCCcccc----------------cCCCCCceeeeeeccccC
Q 029772 101 MKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYI----------------LGLQPGETFMIRNVANLV 164 (188)
Q Consensus 101 Ll~gn~~F~~~~~~~~~~~~~~la~gQ~P~~lvItCsDSRV~pe~I----------------fg~~pGDlFVvRNaGNiV 164 (188)
|+.|..+|+.+.+.+ .-.++..-++|.+..++|+|||.-|..- +..+.||.|++||.||..
T Consensus 3 i~~~~~~~~~t~~~~---~~~~~~~mp~~~~~~~~~~dsrml~~r~~~~~~~~~~~~~~~~~~~~~i~~~Fv~~~~~~~~ 79 (276)
T KOG1578|consen 3 ILRGVIRFRNTTRKD---LVEEIRDMPSPTAVMFTCMDSRMLPTRYNLVAAAKIKKLTAEFDTLEDIGDMFVVRNSGNYI 79 (276)
T ss_pred cccccchhhhhhHHH---hHHHHHhCCCHHHHHHHHHHhhccchhhhhhhhhhhhhhhhccchHHHHHhhHhhhccccCC
Confidence 566778888776532 2256667789999999999999999776 667999999999999999
Q ss_pred CCC
Q 029772 165 PPL 167 (188)
Q Consensus 165 ~~~ 167 (188)
+..
T Consensus 80 ~~p 82 (276)
T KOG1578|consen 80 PNP 82 (276)
T ss_pred CCh
Confidence 974
No 17
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=29.38 E-value=85 Score=28.66 Aligned_cols=48 Identities=23% Similarity=0.358 Sum_probs=31.4
Q ss_pred hHHHHhhhhcCCCcEEEE-eccCCCCCcccccCCCCCceeeeeeccccCCCCCCCCcchhHHHHHHHh
Q 029772 117 LEHFQNLAKAQSPKFMVI-ACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVN 183 (188)
Q Consensus 117 ~~~~~~la~gQ~P~~lvI-tCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~d~~~~s~~aSLEYAV~ 183 (188)
+++-..+..-|.|.++++ ||.|+..||. +|+..| +..+..++|+.+..
T Consensus 168 ~KL~kA~~yLqnP~clflatn~D~~~p~~----------------~~~~ip---G~G~~v~av~~~t~ 216 (306)
T KOG2882|consen 168 PKLMKALNYLQNPGCLFLATNRDATTPPT----------------PGVEIP---GAGSFVAAVKFATG 216 (306)
T ss_pred HHHHHHHHHhCCCCcEEEeccCccccCCC----------------CCeecc---CCccHHHHHHHHhc
Confidence 444455567789998777 8899998864 233333 22477788887764
No 18
>KOG4780 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.36 E-value=47 Score=31.82 Aligned_cols=33 Identities=27% Similarity=0.117 Sum_probs=30.9
Q ss_pred eccCCCCCcccccCCCCCceeeeeeccccCCCC
Q 029772 135 ACADSRVCPSYILGLQPGETFMIRNVANLVPPL 167 (188)
Q Consensus 135 tCsDSRV~pe~Ifg~~pGDlFVvRNaGNiV~~~ 167 (188)
.-.|||.+...+-+-+.||+--+||.+|.+.|.
T Consensus 390 s~~~s~~~~w~~~~~~~~e~~~~r~~~~a~~pl 422 (467)
T KOG4780|consen 390 SKKLSRSVTWADQNDGRGELCEVRNNDNAAGPL 422 (467)
T ss_pred cccccccchhhhccccccchhheeccCceeccc
Confidence 678899999999999999999999999999985
Done!