BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029774
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O58058|PURE_PYRHO N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=purE PE=3 SV=1
Length = 177
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%)
Query: 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI 171
K++ P+VGIIM SDSDLPVM +AAR L +FGVPYEI I+S H+ + A YA A+ERGI
Sbjct: 6 KSEKPLVGIIMGSDSDLPVMKEAARILEEFGVPYEITIISAHRTPERAYEYAKKAEERGI 65
Query: 172 KIIIVGDGVEAHLSGTL 188
++II G G AHL G +
Sbjct: 66 EVIIAGAGGAAHLPGII 82
>sp|P21264|PUR6_YEAST Phosphoribosylaminoimidazole carboxylase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ADE2 PE=1
SV=1
Length = 571
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VGIIM SDSDLPVM+ A L DFGVP+E+ I+S H+ +YA+SA +RGIK II
Sbjct: 403 PLVGIIMGSDSDLPVMSAACAVLKDFGVPFEVTIVSAHRTPHRMSAYAISASKRGIKTII 462
Query: 176 VGDGVEAHLSGTL 188
G G AHL G +
Sbjct: 463 AGAGGAAHLPGMV 475
>sp|Q9UY68|PURE_PYRAB N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=purE PE=3 SV=1
Length = 174
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%)
Query: 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI 171
K P VGIIM SDSDLPVM +AA+ L DF V YE+K++S H+ + YA +A+ERGI
Sbjct: 3 KVGMPKVGIIMGSDSDLPVMKEAAKVLEDFEVDYEMKVISAHRTPERLHEYARTAEERGI 62
Query: 172 KIIIVGDGVEAHLSGTL 188
++II G G AHL G L
Sbjct: 63 EVIIAGAGGAAHLPGVL 79
>sp|Q9WYS7|PURE_THEMA N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=purE PE=1 SV=1
Length = 171
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P VGIIM SDSDLPVM AA L +FG+ YEI I+S H+ YA +A+ERGI++II
Sbjct: 2 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVII 61
Query: 176 VGDGVEAHLSGTL 188
G G AHL G +
Sbjct: 62 AGAGGAAHLPGMV 74
>sp|Q92210|PUR6_CANAL Phosphoribosylaminoimidazole carboxylase OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=ADE2 PE=3 SV=2
Length = 568
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKI 173
++P+VGIIM SDSDLPVM AR L FGVP+E+ I+S H+ YA+ A +RG+K
Sbjct: 395 ESPLVGIIMGSDSDLPVMAVGARILKQFGVPFELTIVSAHRTPHRMSEYAIEAPKRGLKC 454
Query: 174 IIVGDGVEAHLSGTL 188
II G G AHL G +
Sbjct: 455 IIAGAGGAAHLPGMV 469
>sp|Q01930|PUR6_OGAME Phosphoribosylaminoimidazole carboxylase OS=Ogataea methanolica
GN=ADE1 PE=3 SV=1
Length = 543
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 97 STVFEEENANGDSTGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 156
S EE+ G + P+VG+IM SDSDLPVM+ L F VP+E+ I+S H+
Sbjct: 383 SIPLEEQYTTDSIPGTSSKPLVGVIMGSDSDLPVMSLGCNILKQFNVPFEVTIVSAHRTP 442
Query: 157 KGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188
+ YA+ A +RG+K II G G AHL G +
Sbjct: 443 QRMAKYAIDAPKRGLKCIIAGAGGAAHLPGMV 474
>sp|P15567|PUR6_SCHPO Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ade6 PE=3 SV=1
Length = 552
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%)
Query: 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKI 173
++P+VGIIM SDSDL M DAA L +F VPYE+ I+S H+ ++YA +A RG+++
Sbjct: 384 ESPVVGIIMGSDSDLSKMKDAAVILDEFKVPYELTIVSAHRTPDRMVTYARTAASRGLRV 443
Query: 174 IIVGDGVEAHLSGTL 188
II G G AHL G +
Sbjct: 444 IIAGAGGAAHLPGMV 458
>sp|P50504|PUR6_SCHOC Phosphoribosylaminoimidazole carboxylase OS=Schwanniomyces
occidentalis GN=ADE2 PE=3 SV=1
Length = 557
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%)
Query: 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKI 173
+ P+V IIM SDSDLPVM+ A L FGVP+E+ I+S H+ YA+ A +RG+K+
Sbjct: 391 EKPLVSIIMGSDSDLPVMSVGANILKRFGVPFELTIVSAHRTPHRMTQYAIEAPKRGLKV 450
Query: 174 IIVGDGVEAHLSGTL 188
II G G AHL G +
Sbjct: 451 IIAGAGGAAHLPGMV 465
>sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment)
OS=Vigna aconitifolia GN=PURKE PE=2 SV=1
Length = 557
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 91 SSVREPSTVFEEENANGDSTGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL 150
SS+ + E D T T ++G IM SDSDLPVM AA + FGVP+E++I+
Sbjct: 365 SSIESNLAILLEGKGLHDKTAVCST-LLGFIMGSDSDLPVMKSAAEMMEMFGVPHEVRIV 423
Query: 151 SPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188
S H+ + YA SA ERG ++II G G AHL G +
Sbjct: 424 SAHRTPELMFCYASSAHERGYQVIIAGAGGAAHLPGMV 461
>sp|Q87KE1|PURE_VIBPA N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=purE PE=3 SV=1
Length = 161
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 44/69 (63%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
VGIIM S SD P M AA L FGV YE K++S H+ + YA SAKERGIK+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAADMLDQFGVSYETKVVSAHRTPQLLADYASSAKERGIKVIIAG 62
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 63 AGGAAHLPG 71
>sp|O74197|PUR6_CANGA Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=ADE2 PE=3 SV=2
Length = 570
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VG+IM SDSDLPVM+ A + L F VP+E+ I+S H+ YA A RGIK+II
Sbjct: 402 PLVGVIMGSDSDLPVMSAACKMLEQFEVPFEVTIVSAHRTPYRMNKYASEAVSRGIKVII 461
Query: 176 VGDGVEAHLSGTL 188
G G AHL G +
Sbjct: 462 AGAGGAAHLPGMV 474
>sp|Q44679|PURE_CORAM N5-carboxyaminoimidazole ribonucleotide mutase OS=Corynebacterium
ammoniagenes GN=purE PE=3 SV=1
Length = 177
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKII 174
P+VG+IM SDSD P + AA L +FGVP+E+ ++S H+ + L YA A RGIK+I
Sbjct: 3 APLVGLIMGSDSDWPTVEPAAEVLDEFGVPFEVGVVSAHRTPEKMLDYAKQAHTRGIKVI 62
Query: 175 IVGDGVEAHLSGTL 188
+ G AHL G +
Sbjct: 63 VACAGGAAHLPGMV 76
>sp|Q9KVT7|PURE_VIBCH N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=purE PE=3 SV=1
Length = 161
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 43/69 (62%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
VGIIM S SD P M AA L FGV YE K++S H+ YA SAKERG+++II G
Sbjct: 3 VGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVIIAG 62
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 63 AGGAAHLPG 71
>sp|Q54QE4|PURCE_DICDI Bifunctional purine synthesis protein purC/E OS=Dictyostelium
discoideum GN=purC/E PE=1 SV=1
Length = 997
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%)
Query: 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKI 173
+ P+VGIIM S SD M AA TL+ GVP+E +I+S H+ YA +AK RG+KI
Sbjct: 362 NQPLVGIIMGSQSDWETMKLAANTLTTLGVPFETRIVSAHRTPDRLFEYAKTAKSRGLKI 421
Query: 174 IIVGDGVEAHLSG 186
+I G G AHL G
Sbjct: 422 VIAGAGGAAHLPG 434
>sp|O67239|PURE_AQUAE N5-carboxyaminoimidazole ribonucleotide mutase OS=Aquifex aeolicus
(strain VF5) GN=purE PE=3 SV=1
Length = 167
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VG+IM S SD M A L +FGVP+E+K++S H+ + YA +A+ERGI++II
Sbjct: 3 PLVGVIMGSISDWEYMKKAVEVLKEFGVPHEVKVVSAHRTPELMYEYAKTARERGIEVII 62
Query: 176 VGDGVEAHLSG 186
G G AHL G
Sbjct: 63 AGAGGSAHLPG 73
>sp|Q5E1R4|PURE_VIBF1 N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=purE PE=3 SV=1
Length = 161
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 43/69 (62%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
VGIIM S SD P M AA L F VPYE K++S H+ + YA AK+RGIK+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAAEMLDRFNVPYETKVVSAHRTPQLLADYATQAKDRGIKVIIAG 62
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 63 AGGAAHLPG 71
>sp|Q7MGL2|PURE_VIBVY N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio vulnificus
(strain YJ016) GN=purE PE=3 SV=1
Length = 161
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 43/69 (62%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
VGIIM S SD P M AA L FGV YE K++S H+ YA +AKERG+K+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAAEMLDRFGVEYETKVVSAHRTPHLLAEYASTAKERGLKVIIAG 62
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 63 AGGAAHLPG 71
>sp|Q8DDD7|PURE_VIBVU N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio vulnificus
(strain CMCP6) GN=purE PE=3 SV=1
Length = 161
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 43/69 (62%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
VGIIM S SD P M AA L FGV YE K++S H+ YA +AKERG+K+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAAEMLDRFGVEYETKVVSAHRTPHLLAEYASTAKERGLKVIIAG 62
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 63 AGGAAHLPG 71
>sp|P96880|PURE_MYCTU N5-carboxyaminoimidazole ribonucleotide mutase OS=Mycobacterium
tuberculosis GN=purE PE=1 SV=1
Length = 174
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169
T + P VG+IM SDSD PVM DAA L++F +P E++++S H+ + SYA A ER
Sbjct: 2 TPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAER 61
Query: 170 GIKIIIVGDGVEAHLSGTL 188
G+++II G G AHL G +
Sbjct: 62 GLEVIIAGAGGAAHLPGMV 80
>sp|P12044|PURE_BACSU N5-carboxyaminoimidazole ribonucleotide mutase OS=Bacillus subtilis
(strain 168) GN=purE PE=3 SV=1
Length = 162
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VGIIM S SD M A L + VPYE K++S H+ YA +A+ERGIK+II
Sbjct: 3 PLVGIIMGSTSDWETMKHACDILDELNVPYEKKVVSAHRTPDFMFEYAETARERGIKVII 62
Query: 176 VGDGVEAHLSG 186
G G AHL G
Sbjct: 63 AGAGGAAHLPG 73
>sp|P46702|PURE_MYCLE N5-carboxyaminoimidazole ribonucleotide mutase OS=Mycobacterium
leprae (strain TN) GN=purE PE=3 SV=1
Length = 171
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P VG+IM SDSD VM DAA L++F +P E++++S H+ YA +A +R I +II
Sbjct: 5 PRVGVIMGSDSDWSVMQDAAHALAEFDIPIEVRVVSAHRTPAEMFDYARNAVDRSIAVII 64
Query: 176 VGDGVEAHLSGTL 188
G G AHL G +
Sbjct: 65 AGAGGAAHLPGMV 77
>sp|P0CQ37|PUR6_CRYNB Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=ADE2 PE=3
SV=1
Length = 582
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VGIIM SDSDLPVM+ A + L FGVPYE+ I S H+ + + YA +A +RG++ II
Sbjct: 412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAADRGLRAII 471
Query: 176 VGDGVEAHLSG 186
G G AHL G
Sbjct: 472 AGAGGAAHLPG 482
>sp|P0CQ36|PUR6_CRYNJ Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ADE2 PE=3 SV=1
Length = 582
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VGIIM SDSDLPVM+ A + L FGVPYE+ I S H+ + + YA +A +RG++ II
Sbjct: 412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAADRGLRAII 471
Query: 176 VGDGVEAHLSG 186
G G AHL G
Sbjct: 472 AGAGGAAHLPG 482
>sp|P0C017|PUR6_CRYNH Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=ADE2 PE=2 SV=1
Length = 582
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 48/71 (67%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P+VGIIM SDSDLPVM+ A + L FGVPYE+ I S H+ + + YA +A RG++ II
Sbjct: 412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAAGRGLRAII 471
Query: 176 VGDGVEAHLSG 186
G G AHL G
Sbjct: 472 AGAGGAAHLPG 482
>sp|P72157|PURE_PSEAE N5-carboxyaminoimidazole ribonucleotide mutase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=purE PE=3 SV=2
Length = 163
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIV 176
+VG+IM S SD ++ A L G+PYE+K++S H+ YA A+ RG+++II
Sbjct: 4 LVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIA 63
Query: 177 GDGVEAHLSG 186
G G AHL G
Sbjct: 64 GAGGAAHLPG 73
>sp|O06456|PURE_SULSO N5-carboxyaminoimidazole ribonucleotide mutase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=purE PE=3 SV=1
Length = 158
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P V +IM S +D M +A L FG+ YE +++S H+ + + YA A++RGI++II
Sbjct: 2 PKVAVIMGSKNDWEYMREAVEILKQFGIDYEARVVSAHRTPEFMMQYAKEAEKRGIEVII 61
Query: 176 VGDGVEAHLSGTL 188
G G AHL G +
Sbjct: 62 AGAGGAAHLPGMV 74
>sp|Q55498|PURE_SYNY3 N5-carboxyaminoimidazole ribonucleotide mutase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=purE PE=3 SV=1
Length = 176
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%)
Query: 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKII 174
+P+VGIIM SDSDLP M A +F VP E+ I+S H+ + + YA +A +RG++II
Sbjct: 5 SPLVGIIMGSDSDLPTMAAAIAVCEEFAVPTEVAIISAHRTPERMVEYAQTAHQRGLRII 64
Query: 175 IVGDGVEAHLSG 186
I G G AHL G
Sbjct: 65 IAGAGGAAHLPG 76
>sp|Q8FYW3|PURE_BRUSU N5-carboxyaminoimidazole ribonucleotide mutase OS=Brucella suis
biovar 1 (strain 1330) GN=purE PE=3 SV=1
Length = 162
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
V IIM S SD M AA TL G+ ++ +I+S H+ +++A AK G K+II G
Sbjct: 5 VAIIMGSQSDWETMRHAAHTLEALGISFDARIVSAHRTPDRLVAFAKGAKAEGFKVIIAG 64
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 65 AGGAAHLPG 73
>sp|P52558|PURE_BRUME N5-carboxyaminoimidazole ribonucleotide mutase OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=purE PE=3 SV=2
Length = 162
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
V IIM S SD M+ AA TL G+ ++ +I+S H+ +++A AK G K+II G
Sbjct: 5 VAIIMGSQSDWETMHHAADTLEALGISFDARIVSAHRTPDRLVAFAKGAKAEGFKVIIAG 64
Query: 178 DGVEAHLSG 186
G AHL G
Sbjct: 65 AGGAAHLPG 73
>sp|P43849|PURE_HAEIN N5-carboxyaminoimidazole ribonucleotide mutase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purE PE=3 SV=1
Length = 164
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
+ ++M S SD M +A + L + VPY ++++S H+ +A +A++ G K+II G
Sbjct: 7 IAVVMGSKSDWATMQEATQILDELNVPYHVEVVSAHRTPDKLFEFAENAQKNGYKVIIAG 66
Query: 178 DGVEAHLSGTL 188
G AHL G +
Sbjct: 67 AGGAAHLPGMI 77
>sp|P0AG18|PURE_ECOLI N5-carboxyaminoimidazole ribonucleotide mutase OS=Escherichia coli
(strain K12) GN=purE PE=1 SV=2
Length = 169
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169
+ +N+ V I+M S SD M AA VP+ ++++S H+ S+A SA+E
Sbjct: 2 SSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEEN 61
Query: 170 GIKIIIVGDGVEAHLSGTL 188
G ++II G G AHL G +
Sbjct: 62 GYQVIIAGAGGAAHLPGMI 80
>sp|P0AG19|PURE_ECO57 N5-carboxyaminoimidazole ribonucleotide mutase OS=Escherichia coli
O157:H7 GN=purE PE=3 SV=2
Length = 169
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169
+ +N+ V I+M S SD M AA VP+ ++++S H+ S+A SA+E
Sbjct: 2 SSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEEN 61
Query: 170 GIKIIIVGDGVEAHLSGTL 188
G ++II G G AHL G +
Sbjct: 62 GYQVIIAGAGGAAHLPGMI 80
>sp|P22348|PURE_METSM Probable N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanobrevibacter smithii GN=purE PE=3 SV=1
Length = 339
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%)
Query: 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKII 174
TP V II+ S SD+ + + + L +PY +KI S H+ + GIK+
Sbjct: 2 TPKVMIILGSGSDIAIAEKSMKILEKLEIPYSLKIASAHRTPDLVRELVVQGTNAGIKVF 61
Query: 175 IVGDGVEAHLSGTL 188
I G+ AHL G +
Sbjct: 62 IGIAGLAAHLPGAI 75
>sp|P41654|PURE_METTH Probable N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=purE PE=3 SV=1
Length = 334
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175
P V I++ S SD + A + +PY++++ S H+ + + A + G+++ I
Sbjct: 3 PRVMILLGSASDFRIAEKAMEIFEELRIPYDLRVASAHRTHEKVKAIVSEAVKAGVEVFI 62
Query: 176 VGDGVEAHLSGTL 188
G+ AHL G +
Sbjct: 63 GIAGLSAHLPGMI 75
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIK 172
D P+V +I S SD+ + L G+ Y++ ++SP + + Y K +K
Sbjct: 186 QDDPMVSVIPGSYSDMKIAKKTTMFLERMGISYDLNVISPIRYPERFERYL--EKMENVK 243
Query: 173 IIIVGDGVEAHLSGTL 188
+ I G+ AH++G +
Sbjct: 244 LFIAISGLSAHVTGAV 259
>sp|Q58033|PURE_METJA N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=purE PE=1
SV=1
Length = 157
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIV 176
++ IIM S+SDL + A L +FGV +E+++ S H+ + ++K + I
Sbjct: 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIA 57
Query: 177 GDGVEAHLSGTL 188
G+ AHL G +
Sbjct: 58 IAGLAAHLPGVV 69
>sp|A6UQQ6|SYH_METVS Histidine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=hisS PE=3 SV=1
Length = 418
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 13/60 (21%)
Query: 128 LPVMNDA---------ARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178
+PV ND A+TL DFG P EI ++ N+ AL+YA S + ++II+G+
Sbjct: 332 IPVKNDIFLLKECLKIAKTLRDFGNPVEIDLMGRKLNK--ALNYANSKNIK--RVIIIGE 387
>sp|B9E7A4|K6PF_MACCJ 6-phosphofructokinase OS=Macrococcus caseolyticus (strain JCSC5402)
GN=pfkA PE=3 SV=1
Length = 319
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 121 IMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 180
++ S D P MN A R + + Y+I++ +Q +G ++ + ERG VGD +
Sbjct: 6 VLTSGGDAPGMNAAVRAVVRKAMYYDIEVYGVYQGYQGLINNNIKKMERG----TVGDKI 61
Query: 181 E 181
+
Sbjct: 62 Q 62
>sp|Q71XX5|MURE_LISMF UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Listeria monocytogenes serotype 4b (strain
F2365) GN=murE PE=3 SV=1
Length = 491
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 142 GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVE 181
GVPY + H+NR+ A+ +A++ E G I+I G G E
Sbjct: 424 GVPYSDSYVV-HENRRDAIRFAVNEAEAGDVILIAGKGHE 462
>sp|Q929X9|MURE_LISIN UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate
ligase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=murE PE=3 SV=1
Length = 491
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 153 HQNRKGALSYALSAKERGIKIIIVGDGVEAH 183
H+NR+ A+ YA++ E G I+I G G E +
Sbjct: 434 HENRRDAIRYAVNMAEAGDVILIAGKGHEDY 464
>sp|Q5RB59|PUR6_PONAB Multifunctional protein ADE2 OS=Pongo abelii GN=PAICS PE=2 SV=3
Length = 425
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
V ++M S SDL + +FG+P E+++ S H+ L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
>sp|P51583|PUR6_RAT Multifunctional protein ADE2 OS=Rattus norvegicus GN=Paics PE=2
SV=3
Length = 425
Score = 30.0 bits (66), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
V ++M S SDL + +FG+P E+++ S H+ L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
>sp|P22234|PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapiens GN=PAICS PE=1 SV=3
Length = 425
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177
V ++M S SDL + +FG+P E+++ S H+ L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
>sp|Q9DCL9|PUR6_MOUSE Multifunctional protein ADE2 OS=Mus musculus GN=Paics PE=1 SV=4
Length = 425
Score = 30.0 bits (66), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIV 176
V ++M S SDL + +FG+P E+++ S H+ L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,096,348
Number of Sequences: 539616
Number of extensions: 2517696
Number of successful extensions: 7780
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 7729
Number of HSP's gapped (non-prelim): 76
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)