Query 029774
Match_columns 188
No_of_seqs 144 out of 1032
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 04:58:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b4k_A N5-carboxyaminoimidazol 100.0 2.1E-30 7.3E-35 214.6 6.8 79 110-188 17-95 (181)
2 4grd_A N5-CAIR mutase, phospho 100.0 1.1E-29 3.7E-34 209.2 7.2 78 111-188 8-85 (173)
3 1xmp_A PURE, phosphoribosylami 100.0 5E-29 1.7E-33 204.7 6.4 77 112-188 8-84 (170)
4 3lp6_A Phosphoribosylaminoimid 100.0 5.3E-29 1.8E-33 205.0 6.4 79 110-188 2-80 (174)
5 3rg8_A Phosphoribosylaminoimid 100.0 9.5E-29 3.2E-33 200.8 7.3 75 114-188 1-76 (159)
6 3oow_A Phosphoribosylaminoimid 100.0 6.1E-29 2.1E-33 203.4 6.1 76 113-188 3-78 (166)
7 3kuu_A Phosphoribosylaminoimid 99.9 9.9E-29 3.4E-33 203.5 6.7 77 112-188 9-85 (174)
8 3ors_A N5-carboxyaminoimidazol 99.9 1.2E-28 4.1E-33 201.1 6.4 74 115-188 3-76 (163)
9 3trh_A Phosphoribosylaminoimid 99.9 1.6E-28 5.4E-33 201.5 7.1 74 115-188 6-79 (169)
10 1u11_A PURE (N5-carboxyaminoim 99.9 5.1E-28 1.7E-32 200.4 6.6 74 115-188 21-94 (182)
11 1o4v_A Phosphoribosylaminoimid 99.9 6.4E-28 2.2E-32 199.9 6.1 74 115-188 13-86 (183)
12 2ywx_A Phosphoribosylaminoimid 99.9 3.1E-26 1.1E-30 186.0 5.2 69 117-188 1-69 (157)
13 2h31_A Multifunctional protein 99.9 7.9E-25 2.7E-29 198.7 8.1 74 115-188 265-339 (425)
14 3uhj_A Probable glycerol dehyd 94.7 0.043 1.5E-06 48.1 5.6 66 116-182 53-118 (387)
15 1jq5_A Glycerol dehydrogenase; 94.6 0.045 1.6E-06 46.6 5.4 67 116-182 32-98 (370)
16 3bfj_A 1,3-propanediol oxidore 93.8 0.1 3.4E-06 44.8 5.9 67 116-182 34-104 (387)
17 1o2d_A Alcohol dehydrogenase, 93.2 0.21 7.1E-06 42.9 7.0 67 116-182 41-110 (371)
18 3ce9_A Glycerol dehydrogenase; 93.0 0.14 5E-06 43.2 5.6 65 117-182 36-100 (354)
19 3okf_A 3-dehydroquinate syntha 92.7 0.32 1.1E-05 43.2 7.6 66 116-181 63-134 (390)
20 3ox4_A Alcohol dehydrogenase 2 92.3 0.16 5.5E-06 44.0 5.1 67 116-182 32-100 (383)
21 1rrm_A Lactaldehyde reductase; 91.8 0.15 5.1E-06 43.7 4.3 67 116-182 32-100 (386)
22 1vlj_A NADH-dependent butanol 91.7 0.41 1.4E-05 41.6 7.0 65 116-182 44-113 (407)
23 1ta9_A Glycerol dehydrogenase; 91.2 0.18 6.1E-06 45.2 4.3 65 117-182 93-157 (450)
24 1sg6_A Pentafunctional AROM po 91.1 0.39 1.3E-05 41.7 6.2 66 116-181 37-116 (393)
25 3l49_A ABC sugar (ribose) tran 89.8 2.9 9.8E-05 32.1 9.5 64 114-179 4-70 (291)
26 3egc_A Putative ribose operon 89.3 3.1 0.00011 32.1 9.4 64 114-179 7-73 (291)
27 1oj7_A Hypothetical oxidoreduc 88.4 0.5 1.7E-05 41.0 4.7 63 116-182 51-118 (408)
28 3s99_A Basic membrane lipoprot 88.3 2.1 7.2E-05 36.8 8.5 67 112-178 23-94 (356)
29 3lft_A Uncharacterized protein 88.2 3.2 0.00011 32.7 8.9 62 116-178 3-70 (295)
30 3hl0_A Maleylacetate reductase 87.6 0.59 2E-05 40.3 4.6 62 116-182 35-99 (353)
31 2fn9_A Ribose ABC transporter, 87.6 5.6 0.00019 30.5 9.8 64 114-179 1-67 (290)
32 2gru_A 2-deoxy-scyllo-inosose 87.4 2.2 7.4E-05 36.7 8.1 65 116-181 35-105 (368)
33 4fn4_A Short chain dehydrogena 87.0 2.4 8.3E-05 35.0 7.9 47 114-166 5-51 (254)
34 3lkv_A Uncharacterized conserv 86.7 2.3 7.9E-05 34.4 7.5 68 113-180 6-79 (302)
35 3o1i_D Periplasmic protein TOR 86.2 5.4 0.00018 30.6 9.0 66 115-182 5-75 (304)
36 3l6u_A ABC-type sugar transpor 86.0 8.7 0.0003 29.4 10.1 64 114-179 7-73 (293)
37 2qh8_A Uncharacterized protein 85.5 6.3 0.00022 31.1 9.3 63 115-178 8-77 (302)
38 3jzd_A Iron-containing alcohol 85.5 0.83 2.8E-05 39.5 4.5 62 116-182 37-101 (358)
39 3qbe_A 3-dehydroquinate syntha 85.1 1.4 4.7E-05 38.8 5.8 65 116-181 44-114 (368)
40 3msz_A Glutaredoxin 1; alpha-b 84.9 2.4 8.3E-05 27.2 5.6 48 117-166 5-52 (89)
41 1xah_A Sadhqs, 3-dehydroquinat 84.8 0.96 3.3E-05 38.5 4.5 64 116-181 32-101 (354)
42 3m9w_A D-xylose-binding peripl 84.6 9.9 0.00034 29.7 10.0 63 116-180 3-68 (313)
43 2hqb_A Transcriptional activat 84.5 5.6 0.00019 31.9 8.7 61 116-178 6-71 (296)
44 1dbq_A Purine repressor; trans 84.5 8.7 0.0003 29.3 9.4 63 115-179 7-72 (289)
45 2b99_A Riboflavin synthase; lu 83.8 1.5 5E-05 35.3 4.9 62 114-178 1-65 (156)
46 1x60_A Sporulation-specific N- 83.7 6.9 0.00024 26.0 7.6 60 116-176 8-76 (79)
47 1byk_A Protein (trehalose oper 83.5 11 0.00037 28.4 9.4 61 116-178 3-66 (255)
48 3jy6_A Transcriptional regulat 83.5 10 0.00035 29.0 9.4 64 114-179 6-72 (276)
49 3hs3_A Ribose operon repressor 83.1 13 0.00043 28.7 9.9 63 114-178 9-75 (277)
50 3miz_A Putative transcriptiona 82.8 8 0.00027 30.0 8.7 63 114-178 12-78 (301)
51 2iks_A DNA-binding transcripti 82.7 12 0.0004 29.0 9.6 64 114-179 19-85 (293)
52 3dlo_A Universal stress protei 82.7 4.7 0.00016 29.3 6.9 53 130-184 79-131 (155)
53 3c3k_A Alanine racemase; struc 82.5 9.2 0.00031 29.5 8.9 63 115-179 8-73 (285)
54 3kke_A LACI family transcripti 82.1 7.3 0.00025 30.5 8.3 63 115-179 15-80 (303)
55 2vzf_A NADH-dependent FMN redu 81.7 3.5 0.00012 31.5 6.1 59 115-177 2-76 (197)
56 3brq_A HTH-type transcriptiona 81.5 14 0.00048 28.1 9.5 64 114-179 18-86 (296)
57 3h75_A Periplasmic sugar-bindi 81.1 14 0.00046 29.6 9.7 62 115-178 3-70 (350)
58 3o74_A Fructose transport syst 81.0 15 0.00053 27.5 9.6 63 116-180 3-68 (272)
59 1nvm_A HOA, 4-hydroxy-2-oxoval 80.7 3.8 0.00013 35.0 6.6 62 120-182 111-173 (345)
60 1nyt_A Shikimate 5-dehydrogena 80.4 12 0.0004 30.3 9.2 61 116-183 119-193 (271)
61 2qv7_A Diacylglycerol kinase D 80.4 6.1 0.00021 32.9 7.7 62 115-179 24-89 (337)
62 1tjy_A Sugar transport protein 80.4 15 0.00052 29.1 9.7 64 116-181 4-71 (316)
63 3zyw_A Glutaredoxin-3; metal b 80.0 7.9 0.00027 27.7 7.2 57 117-175 17-77 (111)
64 3e61_A Putative transcriptiona 80.0 11 0.00038 28.6 8.5 62 115-178 8-72 (277)
65 3rht_A (gatase1)-like protein; 80.0 1.7 5.8E-05 36.6 4.2 42 113-157 2-43 (259)
66 3gyb_A Transcriptional regulat 79.7 3.7 0.00013 31.4 5.7 58 115-175 5-65 (280)
67 1ujn_A Dehydroquinate synthase 79.6 1.6 5.4E-05 37.4 3.9 61 116-181 29-95 (348)
68 3uug_A Multiple sugar-binding 79.4 13 0.00044 29.1 8.8 63 115-179 3-68 (330)
69 2fvy_A D-galactose-binding per 79.0 14 0.00047 28.4 8.7 61 117-178 4-67 (309)
70 2dri_A D-ribose-binding protei 79.0 19 0.00066 27.5 9.6 61 116-178 2-65 (271)
71 2vk2_A YTFQ, ABC transporter p 78.9 12 0.00042 29.1 8.6 62 116-179 3-67 (306)
72 3brs_A Periplasmic binding pro 78.6 18 0.00062 27.5 9.3 64 115-180 5-75 (289)
73 1aba_A Glutaredoxin; electron 78.6 6.1 0.00021 26.2 5.9 43 127-169 13-58 (87)
74 3ipz_A Monothiol glutaredoxin- 78.6 9 0.00031 27.0 7.1 57 117-175 19-79 (109)
75 3ksm_A ABC-type sugar transpor 78.6 7.1 0.00024 29.4 6.9 61 116-178 1-67 (276)
76 3h5o_A Transcriptional regulat 78.4 16 0.00055 29.1 9.3 62 115-178 62-126 (339)
77 3k4h_A Putative transcriptiona 77.8 10 0.00034 29.0 7.6 64 114-179 7-78 (292)
78 2q62_A ARSH; alpha/beta, flavo 77.6 14 0.00048 30.2 9.0 59 115-177 34-105 (247)
79 3hgm_A Universal stress protei 77.6 13 0.00045 25.6 7.6 53 129-185 70-125 (147)
80 1mjh_A Protein (ATP-binding do 77.5 13 0.00043 26.4 7.6 51 131-185 85-135 (162)
81 3dbi_A Sugar-binding transcrip 77.1 20 0.00068 28.4 9.4 64 114-179 60-128 (338)
82 2rjo_A Twin-arginine transloca 76.9 17 0.00059 28.7 9.0 63 115-179 5-72 (332)
83 8abp_A L-arabinose-binding pro 76.9 21 0.00071 27.4 9.2 61 116-179 3-66 (306)
84 1jx6_A LUXP protein; protein-l 76.6 26 0.00089 27.6 10.1 65 115-180 43-113 (342)
85 2fep_A Catabolite control prot 76.5 21 0.00072 27.6 9.2 61 116-178 17-80 (289)
86 3kjx_A Transcriptional regulat 76.3 24 0.00081 28.2 9.7 63 114-178 67-132 (344)
87 4g81_D Putative hexonate dehyd 76.3 12 0.0004 30.8 8.1 27 115-143 8-34 (255)
88 2rgy_A Transcriptional regulat 76.1 19 0.00066 27.8 8.9 63 115-179 8-76 (290)
89 3d02_A Putative LACI-type tran 76.0 20 0.00067 27.5 8.9 62 116-179 5-70 (303)
90 4eg0_A D-alanine--D-alanine li 76.0 2.9 0.0001 33.9 4.3 37 114-152 12-53 (317)
91 3s3t_A Nucleotide-binding prot 75.7 10 0.00034 26.2 6.5 52 131-186 71-124 (146)
92 2fqx_A Membrane lipoprotein TM 75.3 22 0.00075 28.8 9.4 60 116-178 5-70 (318)
93 3fvw_A Putative NAD(P)H-depend 75.0 15 0.00053 28.1 8.1 60 114-178 1-75 (192)
94 3tb6_A Arabinose metabolism tr 75.0 25 0.00086 26.7 9.3 62 116-179 16-80 (298)
95 3u7r_A NADPH-dependent FMN red 75.0 8.4 0.00029 30.4 6.7 63 114-178 1-75 (190)
96 3iv7_A Alcohol dehydrogenase I 74.9 2 7E-05 37.2 3.3 62 117-182 39-100 (364)
97 3ic4_A Glutaredoxin (GRX-1); s 74.6 14 0.00046 24.2 6.7 61 113-175 9-72 (92)
98 3huu_A Transcription regulator 74.1 12 0.00043 29.1 7.4 63 114-178 21-91 (305)
99 3rot_A ABC sugar transporter, 74.1 28 0.00097 26.9 9.4 62 116-179 4-70 (297)
100 3nrc_A Enoyl-[acyl-carrier-pro 74.0 14 0.00047 29.3 7.7 70 111-182 21-115 (280)
101 2fzv_A Putative arsenical resi 73.7 34 0.0012 28.9 10.5 61 113-177 56-130 (279)
102 2klx_A Glutaredoxin; thioredox 73.1 11 0.00036 24.7 5.9 56 113-174 3-59 (89)
103 1nvt_A Shikimate 5'-dehydrogen 73.1 14 0.00049 29.9 7.8 60 115-182 127-205 (287)
104 3s40_A Diacylglycerol kinase; 73.0 21 0.00072 29.3 8.9 60 116-179 9-72 (304)
105 2dum_A Hypothetical protein PH 72.7 18 0.00061 25.9 7.4 51 130-184 79-131 (170)
106 3d8u_A PURR transcriptional re 72.3 18 0.0006 27.4 7.7 61 116-178 4-67 (275)
107 1yo6_A Putative carbonyl reduc 72.2 23 0.00078 26.4 8.2 66 115-182 2-93 (250)
108 3h7a_A Short chain dehydrogena 72.2 20 0.00067 28.1 8.2 27 115-143 6-32 (252)
109 1uta_A FTSN, MSGA, cell divisi 71.8 5 0.00017 27.2 4.1 58 117-175 9-75 (81)
110 2ahe_A Chloride intracellular 71.7 11 0.00038 30.1 6.7 55 103-158 5-65 (267)
111 1ooe_A Dihydropteridine reduct 71.7 31 0.0011 26.2 9.1 63 115-181 2-83 (236)
112 1gud_A ALBP, D-allose-binding 71.6 33 0.0011 26.5 9.3 61 117-179 3-68 (288)
113 3imf_A Short chain dehydrogena 71.5 18 0.00061 28.2 7.7 29 113-143 3-31 (257)
114 3jvd_A Transcriptional regulat 71.4 23 0.00077 28.4 8.5 63 114-179 63-128 (333)
115 4e08_A DJ-1 beta; flavodoxin-l 71.4 10 0.00035 28.7 6.2 41 112-154 2-42 (190)
116 1qpz_A PURA, protein (purine n 71.3 34 0.0012 27.2 9.5 62 115-178 58-122 (340)
117 3gv0_A Transcriptional regulat 71.3 15 0.0005 28.4 7.1 63 114-178 7-74 (288)
118 1xg5_A ARPG836; short chain de 71.1 25 0.00086 27.5 8.6 28 114-143 30-57 (279)
119 3e3m_A Transcriptional regulat 71.1 31 0.0011 27.7 9.3 62 115-178 70-134 (355)
120 3k9c_A Transcriptional regulat 70.9 19 0.00065 27.9 7.7 61 115-179 12-75 (289)
121 2qu7_A Putative transcriptiona 70.5 22 0.00074 27.2 7.9 61 116-179 9-72 (288)
122 1yb1_A 17-beta-hydroxysteroid 70.4 29 0.00098 27.2 8.8 29 113-143 28-56 (272)
123 2ioy_A Periplasmic sugar-bindi 70.2 34 0.0012 26.2 9.7 60 117-178 3-65 (283)
124 1wik_A Thioredoxin-like protei 70.1 12 0.00042 25.9 5.9 57 117-175 16-76 (109)
125 3clk_A Transcription regulator 70.0 15 0.00052 28.3 7.0 63 115-179 8-74 (290)
126 3gbv_A Putative LACI-family tr 69.9 28 0.00097 26.5 8.4 66 114-179 7-78 (304)
127 3bbl_A Regulatory protein of L 69.9 14 0.00049 28.4 6.8 62 116-179 5-73 (287)
128 3p0r_A Azoreductase; structura 69.9 19 0.00066 28.0 7.7 37 112-148 1-45 (211)
129 2jah_A Clavulanic acid dehydro 69.7 31 0.0011 26.7 8.7 28 114-143 5-32 (247)
130 2yan_A Glutaredoxin-3; oxidore 69.7 20 0.00069 24.5 6.9 57 117-175 18-78 (105)
131 4gqr_A Pancreatic alpha-amylas 69.5 2.4 8.3E-05 35.4 2.4 58 118-175 12-95 (496)
132 3gx8_A Monothiol glutaredoxin- 69.3 18 0.00062 26.2 6.9 57 117-175 17-80 (121)
133 2bon_A Lipid kinase; DAG kinas 68.8 18 0.00061 30.2 7.6 61 116-179 30-91 (332)
134 3pgx_A Carveol dehydrogenase; 68.7 41 0.0014 26.4 9.7 29 113-143 12-40 (280)
135 3sju_A Keto reductase; short-c 68.7 20 0.00068 28.5 7.6 43 115-163 23-65 (279)
136 3grp_A 3-oxoacyl-(acyl carrier 68.7 19 0.00065 28.6 7.5 66 110-181 21-112 (266)
137 2qq5_A DHRS1, dehydrogenase/re 68.5 22 0.00074 27.6 7.6 27 114-142 3-29 (260)
138 2h3h_A Sugar ABC transporter, 68.4 38 0.0013 26.4 9.0 63 116-180 2-67 (313)
139 2wem_A Glutaredoxin-related pr 68.4 22 0.00076 25.9 7.3 58 116-175 20-82 (118)
140 2gm3_A Unknown protein; AT3G01 68.2 13 0.00045 26.8 5.9 51 130-184 88-138 (175)
141 2o20_A Catabolite control prot 68.1 43 0.0015 26.5 9.4 64 114-179 62-128 (332)
142 4fs3_A Enoyl-[acyl-carrier-pro 67.8 10 0.00035 30.0 5.7 31 113-143 3-33 (256)
143 1t1v_A SH3BGRL3, SH3 domain-bi 67.6 13 0.00043 25.1 5.4 45 117-165 3-53 (93)
144 3ctp_A Periplasmic binding pro 67.5 39 0.0013 26.7 9.0 61 115-178 60-123 (330)
145 3grk_A Enoyl-(acyl-carrier-pro 67.2 23 0.0008 28.5 7.8 68 113-182 28-121 (293)
146 3op4_A 3-oxoacyl-[acyl-carrier 66.9 39 0.0013 26.2 8.8 63 114-182 7-95 (248)
147 1m3s_A Hypothetical protein YC 66.9 22 0.00075 26.3 7.1 60 119-179 40-114 (186)
148 3clh_A 3-dehydroquinate syntha 66.8 1.9 6.6E-05 36.7 1.3 64 116-181 27-96 (343)
149 2q5c_A NTRC family transcripti 66.7 5.9 0.0002 31.3 4.1 62 114-183 3-64 (196)
150 3ucx_A Short chain dehydrogena 66.6 31 0.001 27.0 8.2 28 114-143 9-36 (264)
151 1zem_A Xylitol dehydrogenase; 66.5 32 0.0011 26.8 8.2 28 114-143 5-32 (262)
152 2nx9_A Oxaloacetate decarboxyl 66.4 20 0.00067 32.6 7.9 58 117-174 115-175 (464)
153 4da9_A Short-chain dehydrogena 66.3 42 0.0014 26.7 9.1 28 114-143 27-54 (280)
154 1sqs_A Conserved hypothetical 66.3 23 0.00078 27.8 7.4 36 116-153 2-42 (242)
155 3e03_A Short chain dehydrogena 66.1 46 0.0016 26.2 9.4 64 114-181 4-101 (274)
156 3rkr_A Short chain oxidoreduct 66.0 37 0.0013 26.4 8.6 47 111-163 24-70 (262)
157 3g1w_A Sugar ABC transporter; 65.9 42 0.0014 25.8 8.7 62 116-179 5-70 (305)
158 2hqb_A Transcriptional activat 65.7 35 0.0012 27.2 8.5 65 116-182 127-193 (296)
159 3rpe_A MDAB, modulator of drug 65.4 24 0.00082 28.7 7.6 59 114-177 24-90 (218)
160 4eys_A MCCC family protein; MC 65.4 35 0.0012 29.4 9.0 68 114-183 4-86 (346)
161 2x7x_A Sensor protein; transfe 65.3 36 0.0012 26.8 8.4 60 116-178 7-70 (325)
162 3tjr_A Short chain dehydrogena 65.3 40 0.0014 27.1 8.8 43 114-162 29-71 (301)
163 3hcw_A Maltose operon transcri 65.0 21 0.00071 27.7 6.9 62 115-178 7-76 (295)
164 3r5x_A D-alanine--D-alanine li 65.0 9 0.00031 30.4 4.9 55 116-178 4-63 (307)
165 3tfo_A Putative 3-oxoacyl-(acy 65.0 29 0.00099 27.7 7.9 26 116-143 4-29 (264)
166 1tq8_A Hypothetical protein RV 64.5 28 0.00097 25.3 7.2 51 128-182 80-131 (163)
167 3pk0_A Short-chain dehydrogena 64.3 41 0.0014 26.3 8.5 44 113-162 7-50 (262)
168 2wci_A Glutaredoxin-4; redox-a 64.3 23 0.0008 26.5 6.8 57 117-175 36-96 (135)
169 3sr3_A Microcin immunity prote 64.2 26 0.0009 30.0 7.9 64 117-183 15-92 (336)
170 1d4a_A DT-diaphorase, quinone 64.1 48 0.0017 26.9 9.2 35 116-150 3-41 (273)
171 3oec_A Carveol dehydrogenase ( 64.1 51 0.0018 26.7 9.3 30 112-143 42-71 (317)
172 2khp_A Glutaredoxin; thioredox 64.0 27 0.00092 22.7 8.5 56 114-173 4-59 (92)
173 3v8b_A Putative dehydrogenase, 64.0 34 0.0012 27.3 8.2 27 115-143 27-53 (283)
174 4fc7_A Peroxisomal 2,4-dienoyl 63.9 38 0.0013 26.7 8.4 28 114-143 25-52 (277)
175 3idf_A USP-like protein; unive 63.9 32 0.0011 23.5 7.7 50 130-185 67-116 (138)
176 1rvv_A Riboflavin synthase; tr 63.9 22 0.00074 28.2 6.9 60 116-178 13-79 (154)
177 4ibo_A Gluconate dehydrogenase 63.8 35 0.0012 27.1 8.1 44 114-163 24-67 (271)
178 1jeo_A MJ1247, hypothetical pr 63.7 37 0.0013 24.9 7.8 60 119-179 43-117 (180)
179 3qmx_A Glutaredoxin A, glutare 63.7 34 0.0012 23.7 8.6 57 115-175 15-73 (99)
180 3qiv_A Short-chain dehydrogena 63.6 47 0.0016 25.3 8.9 27 115-143 8-34 (253)
181 2rhc_B Actinorhodin polyketide 63.6 52 0.0018 25.9 9.1 43 113-161 19-61 (277)
182 3gdg_A Probable NADP-dependent 63.5 27 0.00093 26.9 7.3 67 114-182 18-113 (267)
183 4h15_A Short chain alcohol deh 63.1 32 0.0011 27.9 8.0 67 114-184 9-92 (261)
184 2obx_A DMRL synthase 1, 6,7-di 62.7 15 0.00053 29.1 5.8 60 116-178 12-78 (157)
185 3sx2_A Putative 3-ketoacyl-(ac 62.3 53 0.0018 25.5 9.2 29 113-143 10-38 (278)
186 3bil_A Probable LACI-family tr 62.2 36 0.0012 27.4 8.0 62 115-178 66-130 (348)
187 3pxx_A Carveol dehydrogenase; 62.2 53 0.0018 25.5 10.5 30 112-143 6-35 (287)
188 2ae2_A Protein (tropinone redu 62.1 48 0.0016 25.6 8.5 28 114-143 7-34 (260)
189 3nyw_A Putative oxidoreductase 62.0 38 0.0013 26.4 7.9 43 115-163 6-48 (250)
190 2pd4_A Enoyl-[acyl-carrier-pro 62.0 32 0.0011 27.0 7.5 67 114-182 4-96 (275)
191 1ejb_A Lumazine synthase; anal 62.0 32 0.0011 27.7 7.6 63 116-178 17-88 (168)
192 4eso_A Putative oxidoreductase 61.8 49 0.0017 25.8 8.6 64 113-182 5-94 (255)
193 1e7w_A Pteridine reductase; di 61.8 37 0.0013 27.1 8.0 60 113-177 6-66 (291)
194 3tox_A Short chain dehydrogena 61.6 40 0.0014 26.9 8.2 44 114-163 6-49 (280)
195 3lyl_A 3-oxoacyl-(acyl-carrier 61.4 41 0.0014 25.5 7.9 28 154-181 64-93 (247)
196 2zat_A Dehydrogenase/reductase 61.0 45 0.0015 25.7 8.1 28 114-143 12-39 (260)
197 2bd0_A Sepiapterin reductase; 60.9 51 0.0017 24.8 8.7 27 155-181 69-97 (244)
198 1rtt_A Conserved hypothetical 60.9 37 0.0013 25.4 7.4 60 117-178 8-80 (193)
199 1t5b_A Acyl carrier protein ph 60.8 47 0.0016 24.4 9.1 38 116-153 2-44 (201)
200 4h1h_A LMO1638 protein; MCCF-l 60.7 29 0.001 29.4 7.5 65 117-183 14-91 (327)
201 3r1i_A Short-chain type dehydr 60.6 34 0.0011 27.3 7.5 28 114-143 30-57 (276)
202 3v2h_A D-beta-hydroxybutyrate 60.6 62 0.0021 25.7 9.3 30 112-143 21-50 (281)
203 4gpa_A Glutamate receptor 4; P 60.4 46 0.0016 26.2 8.2 101 72-179 93-193 (389)
204 3ftp_A 3-oxoacyl-[acyl-carrier 60.4 30 0.001 27.4 7.2 28 114-143 26-53 (270)
205 3rd5_A Mypaa.01249.C; ssgcid, 60.3 47 0.0016 26.2 8.3 63 112-182 12-98 (291)
206 1ae1_A Tropinone reductase-I; 60.1 56 0.0019 25.6 8.6 28 114-143 19-46 (273)
207 1hqk_A 6,7-dimethyl-8-ribityll 59.7 22 0.00076 28.1 6.2 60 116-178 13-79 (154)
208 2cw6_A Hydroxymethylglutaryl-C 59.7 31 0.001 28.6 7.4 57 117-174 96-173 (298)
209 2vo9_A EAD500, L-alanyl-D-glut 59.6 7.9 0.00027 30.8 3.6 54 132-187 42-96 (179)
210 3l6e_A Oxidoreductase, short-c 59.6 47 0.0016 25.6 8.0 61 115-181 2-88 (235)
211 3uxy_A Short-chain dehydrogena 59.5 54 0.0019 25.9 8.5 66 113-182 25-106 (266)
212 3iwt_A 178AA long hypothetical 59.2 47 0.0016 25.1 7.8 65 115-182 15-93 (178)
213 3h8q_A Thioredoxin reductase 3 59.2 33 0.0011 23.9 6.5 57 117-175 18-76 (114)
214 3fg9_A Protein of universal st 59.0 35 0.0012 23.9 6.6 51 130-183 80-132 (156)
215 1di0_A Lumazine synthase; tran 58.9 15 0.00052 29.2 5.2 60 116-178 11-77 (158)
216 3fst_A 5,10-methylenetetrahydr 58.9 37 0.0013 29.0 7.9 51 130-180 70-120 (304)
217 1kq3_A Glycerol dehydrogenase; 58.7 0.98 3.4E-05 38.6 -1.9 64 116-182 42-106 (376)
218 1uzm_A 3-oxoacyl-[acyl-carrier 58.6 61 0.0021 25.0 8.8 65 114-182 13-93 (247)
219 1rqb_A Transcarboxylase 5S sub 58.6 29 0.00098 32.3 7.6 58 117-174 132-192 (539)
220 3rwb_A TPLDH, pyridoxal 4-dehy 58.6 61 0.0021 25.0 9.2 63 113-181 3-91 (247)
221 3td9_A Branched chain amino ac 58.4 24 0.00083 27.9 6.3 60 116-177 150-211 (366)
222 3p19_A BFPVVD8, putative blue 58.4 60 0.0021 25.6 8.6 65 114-182 14-99 (266)
223 3gaf_A 7-alpha-hydroxysteroid 58.2 49 0.0017 25.8 7.9 28 114-143 10-37 (256)
224 2z08_A Universal stress protei 58.2 39 0.0013 23.2 6.6 50 132-185 60-114 (137)
225 3k31_A Enoyl-(acyl-carrier-pro 58.2 27 0.00091 28.1 6.6 67 114-182 28-120 (296)
226 1qsg_A Enoyl-[acyl-carrier-pro 58.1 49 0.0017 25.7 7.9 66 115-182 8-99 (265)
227 2dtx_A Glucose 1-dehydrogenase 58.0 64 0.0022 25.3 8.7 65 114-182 6-86 (264)
228 2hsg_A Glucose-resistance amyl 57.9 39 0.0013 26.6 7.4 62 115-178 60-124 (332)
229 1geg_A Acetoin reductase; SDR 57.7 49 0.0017 25.5 7.8 26 156-181 63-90 (256)
230 1tvm_A PTS system, galactitol- 57.7 50 0.0017 23.8 8.1 58 115-181 21-80 (113)
231 1u9c_A APC35852; structural ge 57.5 24 0.00082 27.2 6.0 41 114-156 4-54 (224)
232 1iow_A DD-ligase, DDLB, D-ALA\ 57.5 16 0.00055 28.5 5.0 40 114-155 1-45 (306)
233 3t4x_A Oxidoreductase, short c 57.3 46 0.0016 26.0 7.7 43 115-163 9-51 (267)
234 2uvd_A 3-oxoacyl-(acyl-carrier 57.2 51 0.0017 25.2 7.8 28 154-181 64-93 (246)
235 1mkz_A Molybdenum cofactor bio 57.1 64 0.0022 24.8 9.3 66 115-182 10-81 (172)
236 3orf_A Dihydropteridine reduct 57.1 59 0.002 25.1 8.2 63 116-182 22-99 (251)
237 3t7c_A Carveol dehydrogenase; 56.9 74 0.0025 25.4 9.8 28 114-143 26-53 (299)
238 3i1j_A Oxidoreductase, short c 56.5 41 0.0014 25.5 7.1 29 113-143 11-39 (247)
239 2q5c_A NTRC family transcripti 56.5 23 0.0008 27.8 5.9 55 116-177 95-149 (196)
240 4imr_A 3-oxoacyl-(acyl-carrier 56.4 39 0.0013 26.9 7.2 28 114-143 31-58 (275)
241 3pzy_A MOG; ssgcid, seattle st 56.4 23 0.00078 27.3 5.7 66 114-182 6-78 (164)
242 3qk7_A Transcriptional regulat 56.3 42 0.0014 26.0 7.2 62 115-179 6-74 (294)
243 3l4e_A Uncharacterized peptida 56.2 25 0.00085 28.0 6.0 48 116-165 28-79 (206)
244 1xq1_A Putative tropinone redu 56.2 62 0.0021 24.8 8.1 26 115-142 13-38 (266)
245 1jye_A Lactose operon represso 56.2 63 0.0022 25.9 8.5 61 115-177 61-125 (349)
246 3uve_A Carveol dehydrogenase ( 56.1 71 0.0024 25.0 9.9 28 114-143 9-36 (286)
247 3loq_A Universal stress protei 55.9 71 0.0024 24.9 9.1 53 127-183 212-264 (294)
248 1xkq_A Short-chain reductase f 55.9 57 0.002 25.6 8.0 28 114-143 4-31 (280)
249 2pju_A Propionate catabolism o 55.8 27 0.00092 28.6 6.3 92 74-177 65-161 (225)
250 3dzc_A UDP-N-acetylglucosamine 55.7 7.6 0.00026 32.8 3.0 39 116-154 26-65 (396)
251 3ot1_A 4-methyl-5(B-hydroxyeth 55.6 27 0.00092 27.0 6.0 40 113-154 7-46 (208)
252 2wul_A Glutaredoxin related pr 55.6 47 0.0016 24.7 7.1 57 117-176 21-83 (118)
253 1e2b_A Enzyme IIB-cellobiose; 55.2 25 0.00085 25.4 5.4 52 117-179 5-59 (106)
254 4e6p_A Probable sorbitol dehyd 55.1 71 0.0024 24.7 8.6 65 114-182 6-94 (259)
255 4dqx_A Probable oxidoreductase 54.8 67 0.0023 25.5 8.4 63 114-182 25-113 (277)
256 1yde_A Retinal dehydrogenase/r 54.7 76 0.0026 24.9 9.0 62 114-181 7-93 (270)
257 1iy8_A Levodione reductase; ox 54.5 63 0.0022 25.0 8.0 28 114-143 11-38 (267)
258 3osu_A 3-oxoacyl-[acyl-carrier 54.3 70 0.0024 24.5 8.2 29 154-182 64-94 (246)
259 1dhr_A Dihydropteridine reduct 54.0 65 0.0022 24.5 7.9 62 116-181 7-87 (241)
260 1v95_A Nuclear receptor coacti 54.0 37 0.0013 26.2 6.5 61 114-177 7-67 (130)
261 3nsx_A Alpha-glucosidase; stru 54.0 37 0.0013 31.9 7.7 53 124-177 173-238 (666)
262 3nq4_A 6,7-dimethyl-8-ribityll 54.0 59 0.002 25.8 7.8 60 116-178 13-80 (156)
263 3tla_A MCCF; serine protease, 53.9 23 0.00079 31.1 5.9 65 117-183 45-122 (371)
264 2fqx_A Membrane lipoprotein TM 53.9 85 0.0029 25.3 9.2 65 117-181 131-199 (318)
265 4dmm_A 3-oxoacyl-[acyl-carrier 53.9 73 0.0025 25.1 8.4 28 114-143 26-53 (269)
266 1vl8_A Gluconate 5-dehydrogena 53.8 59 0.002 25.5 7.8 30 112-143 17-46 (267)
267 2pjk_A 178AA long hypothetical 53.7 49 0.0017 25.8 7.3 67 114-182 14-93 (178)
268 4dyv_A Short-chain dehydrogena 53.7 43 0.0015 26.7 7.0 62 114-181 26-113 (272)
269 3ai3_A NADPH-sorbose reductase 53.6 74 0.0025 24.5 8.2 27 115-143 6-32 (263)
270 3mt0_A Uncharacterized protein 53.5 57 0.0019 25.5 7.6 58 125-185 47-104 (290)
271 4hoj_A REGF protein; GST, glut 53.5 19 0.00064 26.8 4.6 32 129-160 13-44 (210)
272 4e5s_A MCCFLIKE protein (BA_56 53.1 34 0.0012 29.3 6.8 65 117-183 14-91 (331)
273 2ftp_A Hydroxymethylglutaryl-C 53.1 47 0.0016 27.6 7.4 48 129-176 124-178 (302)
274 4e3z_A Putative oxidoreductase 53.1 76 0.0026 24.6 8.3 26 116-143 26-51 (272)
275 3can_A Pyruvate-formate lyase- 53.0 62 0.0021 23.8 7.4 50 126-175 107-180 (182)
276 1xp2_A EAD500, PLY500, L-alany 52.9 13 0.00043 30.6 3.8 55 131-187 41-96 (179)
277 1zl0_A Hypothetical protein PA 52.9 51 0.0018 28.2 7.8 66 117-183 19-93 (311)
278 1w0m_A TIM, triosephosphate is 52.9 26 0.0009 28.9 5.8 44 135-178 78-122 (226)
279 3s55_A Putative short-chain de 52.8 80 0.0027 24.7 8.4 67 112-182 6-111 (281)
280 3un1_A Probable oxidoreductase 52.8 81 0.0028 24.7 8.6 64 115-182 27-108 (260)
281 3n74_A 3-ketoacyl-(acyl-carrie 52.5 65 0.0022 24.6 7.7 63 114-182 7-95 (261)
282 3ble_A Citramalate synthase fr 52.4 26 0.0009 29.8 5.9 58 118-175 112-187 (337)
283 3o26_A Salutaridine reductase; 52.3 43 0.0015 25.9 6.6 28 114-143 10-37 (311)
284 3kzv_A Uncharacterized oxidore 52.2 80 0.0027 24.4 8.7 62 116-181 2-89 (254)
285 3tpc_A Short chain alcohol deh 52.2 79 0.0027 24.3 8.9 64 115-182 6-93 (257)
286 2ab0_A YAJL; DJ-1/THIJ superfa 52.2 33 0.0011 26.4 6.0 40 114-155 1-40 (205)
287 2c07_A 3-oxoacyl-(acyl-carrier 52.2 84 0.0029 24.7 8.5 27 155-181 104-132 (285)
288 1oaa_A Sepiapterin reductase; 52.2 71 0.0024 24.6 7.9 28 155-182 71-104 (259)
289 3p6l_A Sugar phosphate isomera 52.1 58 0.002 24.9 7.4 46 126-175 88-133 (262)
290 4dry_A 3-oxoacyl-[acyl-carrier 52.0 24 0.00081 28.2 5.3 27 115-143 32-58 (281)
291 2h0a_A TTHA0807, transcription 52.0 33 0.0011 25.9 5.8 60 118-179 2-64 (276)
292 3ksu_A 3-oxoacyl-acyl carrier 52.0 83 0.0028 24.6 8.5 28 154-181 73-102 (262)
293 1p77_A Shikimate 5-dehydrogena 51.9 57 0.0019 26.3 7.6 60 116-182 119-192 (272)
294 1hdc_A 3-alpha, 20 beta-hydrox 51.7 69 0.0024 24.8 7.8 63 114-182 3-91 (254)
295 1nff_A Putative oxidoreductase 51.5 84 0.0029 24.5 8.4 62 114-181 5-92 (260)
296 4iiu_A 3-oxoacyl-[acyl-carrier 51.4 76 0.0026 24.6 8.0 28 114-143 24-51 (267)
297 3r3s_A Oxidoreductase; structu 51.3 80 0.0027 25.2 8.3 65 114-182 47-140 (294)
298 3kvo_A Hydroxysteroid dehydrog 51.2 79 0.0027 26.5 8.6 64 114-181 43-140 (346)
299 2fwm_X 2,3-dihydro-2,3-dihydro 51.2 82 0.0028 24.2 9.4 65 114-182 5-86 (250)
300 1di6_A MOGA, molybdenum cofact 50.8 74 0.0025 25.3 8.0 66 115-182 3-78 (195)
301 3oid_A Enoyl-[acyl-carrier-pro 50.7 79 0.0027 24.6 8.1 28 154-181 64-93 (258)
302 2dxa_A Protein YBAK; trans-edi 50.6 7.2 0.00024 29.5 1.9 40 125-164 2-45 (166)
303 3cxt_A Dehydrogenase with diff 50.6 73 0.0025 25.6 8.0 28 114-143 32-59 (291)
304 3tzq_B Short-chain type dehydr 50.5 89 0.003 24.5 8.4 64 114-181 9-96 (271)
305 3hut_A Putative branched-chain 50.4 89 0.003 24.4 9.0 63 117-179 6-81 (358)
306 2o23_A HADH2 protein; HSD17B10 50.3 81 0.0028 23.9 8.7 65 114-182 10-98 (265)
307 2ct6_A SH3 domain-binding glut 50.2 31 0.0011 24.3 5.1 45 117-165 9-59 (111)
308 2nm0_A Probable 3-oxacyl-(acyl 50.2 89 0.0031 24.4 9.1 64 114-181 19-98 (253)
309 1fov_A Glutaredoxin 3, GRX3; a 50.2 44 0.0015 20.8 7.7 47 126-174 9-55 (82)
310 3u5t_A 3-oxoacyl-[acyl-carrier 49.9 89 0.0031 24.6 8.3 62 116-181 27-116 (267)
311 2cfc_A 2-(R)-hydroxypropyl-COM 49.7 80 0.0027 23.7 8.4 24 117-142 3-26 (250)
312 2h6r_A Triosephosphate isomera 49.7 62 0.0021 25.7 7.4 45 135-179 75-120 (219)
313 3uce_A Dehydrogenase; rossmann 49.4 38 0.0013 25.6 5.8 62 114-181 4-70 (223)
314 3f1l_A Uncharacterized oxidore 49.4 70 0.0024 24.7 7.5 28 114-143 10-37 (252)
315 3gk3_A Acetoacetyl-COA reducta 49.3 60 0.0021 25.3 7.2 66 113-182 22-115 (269)
316 1mxh_A Pteridine reductase 2; 49.2 63 0.0022 25.0 7.2 28 114-143 9-36 (276)
317 3tsc_A Putative oxidoreductase 49.1 93 0.0032 24.3 8.8 28 114-143 9-36 (277)
318 1ydn_A Hydroxymethylglutaryl-C 49.1 31 0.0011 28.3 5.7 49 127-175 118-173 (295)
319 3rih_A Short chain dehydrogena 48.9 76 0.0026 25.6 7.9 45 112-162 37-81 (293)
320 3lt0_A Enoyl-ACP reductase; tr 48.9 44 0.0015 27.2 6.5 29 116-144 2-30 (329)
321 2p91_A Enoyl-[acyl-carrier-pro 48.8 55 0.0019 25.7 6.9 67 114-182 19-111 (285)
322 3l77_A Short-chain alcohol deh 48.8 77 0.0026 23.8 7.5 24 117-142 3-26 (235)
323 3svt_A Short-chain type dehydr 48.8 95 0.0032 24.3 8.7 27 115-143 10-36 (281)
324 3l4y_A Maltase-glucoamylase, i 48.5 49 0.0017 32.4 7.8 52 125-177 301-365 (875)
325 1c2y_A Protein (lumazine synth 48.3 35 0.0012 27.1 5.6 60 116-178 14-79 (156)
326 1x1t_A D(-)-3-hydroxybutyrate 48.2 87 0.003 24.1 7.8 25 116-142 4-28 (260)
327 3a28_C L-2.3-butanediol dehydr 48.2 87 0.003 24.1 7.9 26 156-181 65-92 (258)
328 3vup_A Beta-1,4-mannanase; TIM 48.1 49 0.0017 25.0 6.2 52 125-177 38-110 (351)
329 3ak4_A NADH-dependent quinucli 48.1 84 0.0029 24.2 7.7 62 114-181 10-97 (263)
330 4egf_A L-xylulose reductase; s 48.0 75 0.0026 24.8 7.5 28 114-143 18-45 (266)
331 2b4q_A Rhamnolipids biosynthes 47.9 92 0.0032 24.6 8.1 43 114-162 27-69 (276)
332 1w6u_A 2,4-dienoyl-COA reducta 47.7 97 0.0033 24.1 8.3 29 113-143 23-51 (302)
333 1yx1_A Hypothetical protein PA 47.6 44 0.0015 25.8 6.0 47 117-166 100-151 (264)
334 2x9g_A PTR1, pteridine reducta 47.5 74 0.0025 25.0 7.5 28 114-143 21-48 (288)
335 1spx_A Short-chain reductase f 47.3 72 0.0025 24.7 7.3 41 114-160 4-44 (278)
336 3s81_A Putative aspartate race 47.3 73 0.0025 26.4 7.7 63 111-176 22-105 (268)
337 1oi4_A Hypothetical protein YH 47.3 43 0.0015 25.5 5.9 42 113-156 21-62 (193)
338 2hpv_A FMN-dependent NADH-azor 47.2 87 0.003 23.4 8.4 37 116-152 2-44 (208)
339 3o38_A Short chain dehydrogena 46.9 96 0.0033 23.8 10.3 66 113-182 19-113 (266)
340 3pwz_A Shikimate dehydrogenase 46.8 1E+02 0.0035 25.4 8.5 62 116-183 120-196 (272)
341 1uay_A Type II 3-hydroxyacyl-C 46.7 87 0.003 23.2 8.0 62 116-181 2-77 (242)
342 1jub_A Dihydroorotate dehydrog 46.6 72 0.0025 25.9 7.5 35 142-177 158-192 (311)
343 1sby_A Alcohol dehydrogenase; 46.4 93 0.0032 23.7 7.7 26 116-143 5-30 (254)
344 3oig_A Enoyl-[acyl-carrier-pro 46.4 98 0.0034 23.8 8.3 67 114-182 5-99 (266)
345 2d1y_A Hypothetical protein TT 46.3 99 0.0034 23.8 9.4 65 114-182 4-89 (256)
346 1xhl_A Short-chain dehydrogena 46.1 96 0.0033 24.9 8.0 42 114-161 24-65 (297)
347 3f9i_A 3-oxoacyl-[acyl-carrier 46.0 79 0.0027 24.0 7.2 64 113-182 11-96 (249)
348 1lwj_A 4-alpha-glucanotransfer 46.0 49 0.0017 28.2 6.6 51 126-176 20-89 (441)
349 3is3_A 17BETA-hydroxysteroid d 45.8 1.1E+02 0.0036 24.0 8.9 29 113-143 15-43 (270)
350 2pju_A Propionate catabolism o 45.5 17 0.00059 29.8 3.6 66 113-183 10-76 (225)
351 3gem_A Short chain dehydrogena 45.5 60 0.002 25.5 6.6 64 114-181 25-110 (260)
352 3lpp_A Sucrase-isomaltase; gly 45.4 55 0.0019 32.1 7.6 52 125-177 329-393 (898)
353 3dii_A Short-chain dehydrogena 45.3 1E+02 0.0035 23.7 8.0 61 116-182 2-87 (247)
354 1no5_A Hypothetical protein HI 45.1 79 0.0027 22.3 7.6 81 99-186 32-112 (114)
355 1gee_A Glucose 1-dehydrogenase 44.9 86 0.003 23.8 7.3 27 156-182 69-97 (261)
356 1hg3_A Triosephosphate isomera 44.9 27 0.00091 28.8 4.6 44 135-178 81-125 (225)
357 2z1n_A Dehydrogenase; reductas 44.8 1.1E+02 0.0036 23.7 8.0 27 115-143 6-32 (260)
358 3bg3_A Pyruvate carboxylase, m 44.6 88 0.003 30.0 8.7 64 118-182 213-285 (718)
359 2bgk_A Rhizome secoisolaricire 44.3 1E+02 0.0036 23.5 8.4 63 114-182 14-104 (278)
360 3o21_A Glutamate receptor 3; p 44.0 1.2E+02 0.0042 24.8 8.5 104 69-178 90-193 (389)
361 3edm_A Short chain dehydrogena 44.0 1.1E+02 0.0038 23.7 8.3 64 114-181 6-97 (259)
362 2yv9_A Chloride intracellular 43.9 37 0.0013 27.4 5.3 49 106-156 11-69 (291)
363 2g3m_A Maltase, alpha-glucosid 43.9 76 0.0026 29.8 8.0 53 124-177 185-250 (693)
364 1pzx_A Hypothetical protein AP 43.9 54 0.0018 27.3 6.4 66 113-186 1-95 (289)
365 2i0f_A 6,7-dimethyl-8-ribityll 43.8 56 0.0019 25.9 6.2 63 116-178 13-81 (157)
366 3gvc_A Oxidoreductase, probabl 43.8 78 0.0027 25.2 7.1 62 114-181 27-114 (277)
367 3v2g_A 3-oxoacyl-[acyl-carrier 43.5 1.2E+02 0.0041 23.9 8.8 65 114-181 29-120 (271)
368 3m1a_A Putative dehydrogenase; 43.5 53 0.0018 25.5 6.0 60 116-181 5-90 (281)
369 1gz6_A Estradiol 17 beta-dehyd 43.5 1.1E+02 0.0038 25.0 8.2 33 114-150 7-39 (319)
370 1pea_A Amidase operon; gene re 43.3 1.3E+02 0.0043 24.2 9.3 64 116-179 8-84 (385)
371 1dp4_A Atrial natriuretic pept 43.3 67 0.0023 26.1 6.8 61 116-178 147-214 (435)
372 3rf7_A Iron-containing alcohol 43.2 16 0.00056 31.8 3.2 63 117-182 55-121 (375)
373 2ew8_A (S)-1-phenylethanol deh 43.0 1.1E+02 0.0038 23.4 9.4 64 114-181 5-93 (249)
374 2z1k_A (NEO)pullulanase; hydro 43.0 54 0.0018 28.1 6.4 52 126-177 47-117 (475)
375 3tem_A Ribosyldihydronicotinam 42.5 1.1E+02 0.0037 24.3 7.8 34 117-150 3-40 (228)
376 2wyu_A Enoyl-[acyl carrier pro 42.5 71 0.0024 24.7 6.6 66 115-182 7-98 (261)
377 1wdv_A Hypothetical protein AP 42.4 20 0.00067 26.3 3.1 47 131-177 2-49 (152)
378 1ydo_A HMG-COA lyase; TIM-barr 42.4 84 0.0029 26.5 7.4 58 117-175 97-175 (307)
379 1sny_A Sniffer CG10964-PA; alp 42.4 1.1E+02 0.0038 23.2 7.9 68 113-182 18-114 (267)
380 3cs3_A Sugar-binding transcrip 42.2 1.1E+02 0.0037 23.2 7.4 62 116-179 119-186 (277)
381 4g85_A Histidine-tRNA ligase, 42.2 1.1E+02 0.0037 27.1 8.4 59 115-177 419-477 (517)
382 2kok_A Arsenate reductase; bru 42.2 25 0.00086 25.3 3.6 39 127-165 14-53 (120)
383 3sc4_A Short chain dehydrogena 42.2 90 0.0031 24.7 7.2 65 114-182 7-105 (285)
384 4fgs_A Probable dehydrogenase 42.1 63 0.0022 26.8 6.6 64 115-181 28-114 (273)
385 2g2c_A Putative molybdenum cof 42.0 79 0.0027 24.0 6.6 67 113-182 3-81 (167)
386 1usg_A Leucine-specific bindin 42.0 1.2E+02 0.004 23.4 8.4 36 141-176 40-75 (346)
387 3qlj_A Short chain dehydrogena 41.8 1.4E+02 0.0046 24.1 8.9 31 111-143 22-52 (322)
388 2l82_A Designed protein OR32; 41.8 1.3E+02 0.0045 23.9 8.2 61 119-179 29-112 (162)
389 4a26_A Putative C-1-tetrahydro 41.7 89 0.0031 27.1 7.6 54 116-169 39-93 (300)
390 3u9l_A 3-oxoacyl-[acyl-carrier 41.6 1.2E+02 0.0041 24.9 8.1 27 115-143 4-30 (324)
391 4hi7_A GI20122; GST, glutathio 41.6 32 0.0011 25.9 4.3 36 129-164 13-48 (228)
392 3l18_A Intracellular protease 41.2 52 0.0018 24.0 5.3 38 116-155 3-40 (168)
393 3lzd_A DPH2; diphthamide biosy 41.2 42 0.0014 30.0 5.6 55 116-178 265-322 (378)
394 1kz1_A 6,7-dimethyl-8-ribityll 40.9 83 0.0028 25.1 6.8 60 116-178 18-85 (159)
395 1fjh_A 3alpha-hydroxysteroid d 40.9 1E+02 0.0035 23.3 7.1 59 117-182 2-74 (257)
396 2o7s_A DHQ-SDH PR, bifunctiona 40.9 72 0.0025 28.4 7.1 60 114-180 362-434 (523)
397 2ztj_A Homocitrate synthase; ( 40.7 1E+02 0.0036 26.6 8.0 56 118-174 90-161 (382)
398 2c92_A 6,7-dimethyl-8-ribityll 40.6 61 0.0021 25.8 6.0 58 116-178 18-80 (160)
399 3rbt_A Glutathione transferase 40.6 1.1E+02 0.0039 23.3 7.4 33 128-160 35-67 (246)
400 4ba0_A Alpha-glucosidase, puta 40.4 61 0.0021 31.3 7.0 51 126-177 274-342 (817)
401 1fmc_A 7 alpha-hydroxysteroid 40.4 1.1E+02 0.0039 22.8 7.5 28 155-182 71-100 (255)
402 2e6f_A Dihydroorotate dehydrog 40.4 46 0.0016 27.1 5.4 36 116-153 95-134 (314)
403 3lf2_A Short chain oxidoreduct 40.3 1.3E+02 0.0044 23.4 8.7 28 114-143 6-33 (265)
404 3lcm_A SMU.1420, putative oxid 40.1 71 0.0024 24.4 6.1 56 117-177 2-80 (196)
405 2guy_A Alpha-amylase A; (beta- 40.1 69 0.0023 27.5 6.6 51 126-176 40-117 (478)
406 2pbq_A Molybdenum cofactor bio 40.0 1.3E+02 0.0043 23.2 8.6 66 114-182 4-80 (178)
407 2wc7_A Alpha amylase, catalyti 39.7 49 0.0017 28.6 5.7 53 125-177 52-123 (488)
408 2qhx_A Pteridine reductase 1; 39.7 1.2E+02 0.004 24.9 7.7 59 114-177 44-103 (328)
409 4aie_A Glucan 1,6-alpha-glucos 39.7 64 0.0022 27.6 6.3 51 126-176 29-99 (549)
410 3l07_A Bifunctional protein fo 39.5 1E+02 0.0035 26.5 7.6 54 116-169 36-90 (285)
411 3r6w_A FMN-dependent NADH-azor 39.4 1.2E+02 0.0042 22.9 8.7 35 116-150 2-43 (212)
412 3gkx_A Putative ARSC family re 39.3 36 0.0012 24.8 4.2 41 126-166 12-53 (120)
413 3k1y_A Oxidoreductase; structu 39.3 1.3E+02 0.0046 23.3 8.2 61 116-178 12-93 (191)
414 2rk3_A Protein DJ-1; parkinson 39.2 72 0.0025 24.0 6.0 39 114-154 2-40 (197)
415 3awd_A GOX2181, putative polyo 39.2 1.2E+02 0.0042 22.8 8.2 27 156-182 74-102 (260)
416 3apt_A Methylenetetrahydrofola 39.0 99 0.0034 26.2 7.4 51 130-181 60-110 (310)
417 1z3e_A Regulatory protein SPX; 39.0 52 0.0018 23.9 5.0 39 126-164 9-48 (132)
418 1kjq_A GART 2, phosphoribosylg 38.9 1.3E+02 0.0046 24.4 8.0 61 110-179 6-83 (391)
419 3ab8_A Putative uncharacterize 38.7 1.1E+02 0.0039 23.2 7.1 47 129-181 199-245 (268)
420 4g84_A Histidine--tRNA ligase, 38.6 1E+02 0.0036 26.3 7.5 58 116-177 367-424 (464)
421 2lqo_A Putative glutaredoxin R 38.6 46 0.0016 23.3 4.5 56 116-175 4-61 (92)
422 4a5o_A Bifunctional protein fo 38.5 1.1E+02 0.0037 26.4 7.6 54 116-169 37-91 (286)
423 1wma_A Carbonyl reductase [NAD 38.3 1.2E+02 0.0042 22.6 7.4 26 156-181 66-93 (276)
424 3qay_A Endolysin; amidase A/B 38.0 82 0.0028 24.5 6.3 49 127-178 31-85 (180)
425 1rli_A Trp repressor binding p 37.8 66 0.0023 23.3 5.4 13 113-126 2-14 (184)
426 3p2o_A Bifunctional protein fo 37.7 1.2E+02 0.004 26.1 7.7 54 116-169 35-89 (285)
427 3fz4_A Putative arsenate reduc 37.4 41 0.0014 24.5 4.2 40 126-165 11-51 (120)
428 2a5l_A Trp repressor binding p 37.3 89 0.003 22.9 6.1 37 116-154 6-44 (200)
429 3rdw_A Putative arsenate reduc 37.2 36 0.0012 24.9 3.8 41 126-166 13-54 (121)
430 3ioy_A Short-chain dehydrogena 37.1 1.7E+02 0.0057 23.8 8.3 43 114-162 6-48 (319)
431 2vrn_A Protease I, DR1199; cys 37.1 79 0.0027 23.5 5.8 39 116-156 10-48 (190)
432 1f76_A Dihydroorotate dehydrog 36.9 1.1E+02 0.0038 25.3 7.2 37 142-179 211-247 (336)
433 2wte_A CSA3; antiviral protein 36.8 1.7E+02 0.0059 23.8 8.8 64 117-181 36-104 (244)
434 3ipc_A ABC transporter, substr 36.7 1.5E+02 0.0051 23.1 9.4 38 142-179 41-78 (356)
435 2dh2_A 4F2 cell-surface antige 36.5 64 0.0022 27.8 5.9 52 125-176 32-101 (424)
436 1o1x_A Ribose-5-phosphate isom 36.4 70 0.0024 25.5 5.7 71 117-187 12-93 (155)
437 3ff4_A Uncharacterized protein 36.3 50 0.0017 24.4 4.6 65 116-180 5-92 (122)
438 3fxa_A SIS domain protein; str 36.2 84 0.0029 23.5 5.9 57 119-175 48-124 (201)
439 1m53_A Isomaltulose synthase; 36.2 67 0.0023 28.7 6.1 51 126-176 42-112 (570)
440 2amj_A Modulator of drug activ 35.9 1.1E+02 0.0038 23.6 6.7 57 116-177 13-77 (204)
441 3olq_A Universal stress protei 35.9 94 0.0032 24.3 6.3 50 132-184 76-125 (319)
442 3f0i_A Arsenate reductase; str 35.9 32 0.0011 25.1 3.4 41 126-166 12-53 (119)
443 3lmz_A Putative sugar isomeras 35.8 1.5E+02 0.005 22.7 7.5 46 126-175 86-131 (257)
444 1fob_A Beta-1,4-galactanase; B 35.8 49 0.0017 27.9 5.0 44 134-177 32-80 (334)
445 3ot5_A UDP-N-acetylglucosamine 35.7 21 0.00072 30.3 2.7 38 117-154 29-68 (403)
446 3tl3_A Short-chain type dehydr 35.5 1.5E+02 0.0051 22.7 8.3 64 114-181 7-90 (257)
447 3vk9_A Glutathione S-transfera 35.5 34 0.0011 25.7 3.5 36 129-164 12-47 (216)
448 3egl_A DEGV family protein; al 35.3 51 0.0017 27.5 4.9 64 117-186 5-77 (277)
449 3c5y_A Ribose/galactose isomer 35.2 44 0.0015 28.5 4.6 77 110-187 15-107 (231)
450 1lu9_A Methylene tetrahydromet 35.2 1.7E+02 0.0058 23.3 8.6 61 114-180 117-198 (287)
451 4hp8_A 2-deoxy-D-gluconate 3-d 35.1 1.6E+02 0.0053 24.2 7.8 45 114-163 7-51 (247)
452 1wzl_A Alpha-amylase II; pullu 35.0 88 0.003 28.0 6.7 50 127-176 171-239 (585)
453 3c8f_A Pyruvate formate-lyase 35.0 1.2E+02 0.0041 22.5 6.6 43 129-171 147-192 (245)
454 3lft_A Uncharacterized protein 34.9 1.6E+02 0.0054 22.8 7.8 60 116-179 134-195 (295)
455 1a4i_A Methylenetetrahydrofola 34.9 87 0.003 27.2 6.5 54 115-168 36-90 (301)
456 2ekp_A 2-deoxy-D-gluconate 3-d 34.9 1.3E+02 0.0044 22.8 6.8 61 116-182 2-82 (239)
457 3sho_A Transcriptional regulat 34.8 1.3E+02 0.0045 21.9 8.0 57 118-174 41-118 (187)
458 3m3m_A Glutathione S-transfera 34.6 51 0.0017 24.1 4.4 25 128-152 12-36 (210)
459 2vg3_A Undecaprenyl pyrophosph 34.5 1.4E+02 0.0047 25.8 7.6 47 114-160 55-121 (284)
460 3vln_A GSTO-1, glutathione S-t 34.4 52 0.0018 24.8 4.5 33 128-160 32-64 (241)
461 3ngx_A Bifunctional protein fo 34.4 97 0.0033 26.6 6.6 53 116-169 29-82 (276)
462 2qh8_A Uncharacterized protein 34.3 1.5E+02 0.0051 23.1 7.3 60 116-179 141-202 (302)
463 2pd6_A Estradiol 17-beta-dehyd 34.3 1.1E+02 0.0039 23.1 6.4 28 114-143 5-32 (264)
464 1vim_A Hypothetical protein AF 34.2 1.2E+02 0.004 23.1 6.5 60 119-179 50-124 (200)
465 4fu0_A D-alanine--D-alanine li 34.2 34 0.0012 28.4 3.7 33 116-150 4-41 (357)
466 3afn_B Carbonyl reductase; alp 34.1 1.5E+02 0.005 22.2 7.1 25 156-180 69-95 (258)
467 1nm3_A Protein HI0572; hybrid, 34.1 50 0.0017 25.4 4.4 35 117-153 171-205 (241)
468 3ksu_A 3-oxoacyl-acyl carrier 34.1 1.7E+02 0.0057 22.8 7.8 60 114-177 9-69 (262)
469 3eaf_A ABC transporter, substr 34.0 97 0.0033 24.9 6.3 61 117-178 143-207 (391)
470 1xu9_A Corticosteroid 11-beta- 33.8 1.3E+02 0.0045 23.5 6.9 28 114-143 26-53 (286)
471 3h6g_A Glutamate receptor, ion 33.7 58 0.002 26.3 4.9 59 116-178 139-199 (395)
472 1g0o_A Trihydroxynaphthalene r 33.6 1.6E+02 0.0054 23.0 7.3 28 114-143 27-54 (283)
473 1zk4_A R-specific alcohol dehy 33.6 1.5E+02 0.0051 22.2 7.1 28 114-143 4-31 (251)
474 1u6t_A SH3 domain-binding glut 33.6 1.1E+02 0.0039 22.9 6.2 34 131-166 19-52 (121)
475 1t0i_A YLR011WP; FMN binding p 33.6 75 0.0026 23.4 5.2 25 117-141 2-30 (191)
476 1zja_A Trehalulose synthase; s 33.6 91 0.0031 27.7 6.5 51 126-176 29-99 (557)
477 1j0h_A Neopullulanase; beta-al 33.5 1E+02 0.0034 27.7 6.8 50 127-176 174-242 (588)
478 2is8_A Molybdopterin biosynthe 33.4 92 0.0031 23.6 5.8 65 116-182 2-74 (164)
479 2hq1_A Glucose/ribitol dehydro 33.3 1.5E+02 0.0051 22.1 9.0 26 156-181 67-94 (247)
480 3rhb_A ATGRXC5, glutaredoxin-C 33.2 74 0.0025 21.6 4.8 45 117-163 20-65 (113)
481 4h8e_A Undecaprenyl pyrophosph 33.1 1.4E+02 0.0048 25.5 7.4 70 114-185 24-124 (256)
482 3pam_A Transmembrane protein; 33.1 1.2E+02 0.004 23.4 6.4 56 117-179 130-185 (259)
483 3saj_A Glutamate receptor 1; r 33.1 65 0.0022 26.1 5.1 102 70-178 89-190 (384)
484 1ja9_A 4HNR, 1,3,6,8-tetrahydr 33.1 1.6E+02 0.0054 22.3 8.0 26 115-142 20-45 (274)
485 3cis_A Uncharacterized protein 32.9 1.7E+02 0.0056 23.0 7.4 50 130-185 83-137 (309)
486 2c2x_A Methylenetetrahydrofola 32.9 1E+02 0.0034 26.5 6.5 55 115-169 33-88 (281)
487 3i12_A D-alanine-D-alanine lig 32.9 32 0.0011 28.8 3.4 40 116-155 4-46 (364)
488 2dgd_A 223AA long hypothetical 32.9 1.7E+02 0.0057 22.6 7.7 64 116-182 109-184 (223)
489 4evq_A Putative ABC transporte 32.8 1.5E+02 0.0051 23.2 7.0 65 115-179 16-91 (375)
490 2h7i_A Enoyl-[acyl-carrier-pro 32.7 1E+02 0.0035 24.0 6.0 65 114-182 5-99 (269)
491 4aef_A Neopullulanase (alpha-a 32.5 89 0.003 28.3 6.4 50 127-176 237-305 (645)
492 3rfq_A Pterin-4-alpha-carbinol 32.4 1.1E+02 0.0037 24.3 6.3 66 114-182 29-101 (185)
493 1uok_A Oligo-1,6-glucosidase; 32.3 71 0.0024 28.4 5.6 52 126-177 28-99 (558)
494 1o5i_A 3-oxoacyl-(acyl carrier 32.1 1.7E+02 0.0059 22.5 7.3 61 113-181 16-92 (249)
495 3k9c_A Transcriptional regulat 32.0 1.4E+02 0.0048 22.9 6.7 64 116-179 127-194 (289)
496 1gcy_A Glucan 1,4-alpha-maltot 32.0 1.3E+02 0.0044 26.6 7.2 50 126-176 33-112 (527)
497 1y5e_A Molybdenum cofactor bio 32.0 1.7E+02 0.0057 22.2 8.6 65 115-182 13-84 (169)
498 1rw1_A Conserved hypothetical 32.0 41 0.0014 23.9 3.4 40 126-165 8-48 (114)
499 3tov_A Glycosyl transferase fa 32.0 26 0.00088 29.2 2.6 28 154-186 250-277 (349)
500 3vtz_A Glucose 1-dehydrogenase 32.0 1.8E+02 0.0063 22.7 9.4 66 113-182 11-93 (269)
No 1
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=99.96 E-value=2.1e-30 Score=214.61 Aligned_cols=79 Identities=41% Similarity=0.685 Sum_probs=72.7
Q ss_pred CCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 110 ~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
....|+|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 17 ~~~~mkp~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvv 95 (181)
T 4b4k_A 17 RGSHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMV 95 (181)
T ss_dssp -----CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHH
T ss_pred CCCCCCccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhH
Confidence 3456788999999999999999999999999999999999999999999999999999999999999999999999985
No 2
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=99.96 E-value=1.1e-29 Score=209.16 Aligned_cols=78 Identities=45% Similarity=0.771 Sum_probs=74.6
Q ss_pred CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 111 GKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 111 ~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
..+..|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+|||+|||||||
T Consensus 8 ~~~~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvv 85 (173)
T 4grd_A 8 HTHSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGML 85 (173)
T ss_dssp TCCSSCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHH
T ss_pred CCCCCCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhh
Confidence 445668999999999999999999999999999999999999999999999999999999999999999999999985
No 3
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=99.95 E-value=5e-29 Score=204.66 Aligned_cols=77 Identities=40% Similarity=0.678 Sum_probs=72.7
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
-.|+|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 8 ~~~~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 84 (170)
T 1xmp_A 8 HHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMV 84 (170)
T ss_dssp ---CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred ccCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999985
No 4
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=99.95 E-value=5.3e-29 Score=205.00 Aligned_cols=79 Identities=46% Similarity=0.786 Sum_probs=73.3
Q ss_pred CCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 110 ~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
+.++++|+|+|||||+||+|+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 2 ~~~~~~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 80 (174)
T 3lp6_A 2 TPAGERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMV 80 (174)
T ss_dssp ----CCCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHH
T ss_pred CCCCCCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHH
Confidence 3566778999999999999999999999999999999999999999999999999999999999999999999999985
No 5
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=99.95 E-value=9.5e-29 Score=200.80 Aligned_cols=75 Identities=31% Similarity=0.383 Sum_probs=71.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC-CCeEEEEecCccCcCcCCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~-GvkVIIAvAGmAAHLPGVV 188 (188)
|+|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++ |++||||+||++|||||||
T Consensus 1 ~~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~Lpgvv 76 (159)
T 3rg8_A 1 MRPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFV 76 (159)
T ss_dssp -CCEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHH
T ss_pred CCCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHH
Confidence 46799999999999999999999999999999999999999999999999999886 7999999999999999985
No 6
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=99.95 E-value=6.1e-29 Score=203.39 Aligned_cols=76 Identities=39% Similarity=0.672 Sum_probs=72.3
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
.|+|+|+|||||+||||+|+++.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 3 ~m~p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 78 (166)
T 3oow_A 3 AMSVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMV 78 (166)
T ss_dssp --CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHH
T ss_pred CCCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHH
Confidence 4668999999999999999999999999999999999999999999999999999999999999999999999985
No 7
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=99.95 E-value=9.9e-29 Score=203.50 Aligned_cols=77 Identities=34% Similarity=0.569 Sum_probs=73.8
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
-.|+|+|+|||||+|||++|+++.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 9 ~~m~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 85 (174)
T 3kuu_A 9 YAAGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGML 85 (174)
T ss_dssp SCCCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHH
T ss_pred ccCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHH
Confidence 34667999999999999999999999999999999999999999999999999999999999999999999999985
No 8
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=99.95 E-value=1.2e-28 Score=201.12 Aligned_cols=74 Identities=41% Similarity=0.670 Sum_probs=72.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
.|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 3 ~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 76 (163)
T 3ors_A 3 AMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMV 76 (163)
T ss_dssp CCCEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999985
No 9
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=99.95 E-value=1.6e-28 Score=201.45 Aligned_cols=74 Identities=39% Similarity=0.676 Sum_probs=72.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
.|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 6 ~~~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 79 (169)
T 3trh_A 6 KIFVAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTI 79 (169)
T ss_dssp CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHH
T ss_pred CCcEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999985
No 10
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=99.94 E-value=5.1e-28 Score=200.42 Aligned_cols=74 Identities=42% Similarity=0.661 Sum_probs=72.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
+++|+|||||+|||++|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 21 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 94 (182)
T 1u11_A 21 APVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMC 94 (182)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999985
No 11
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=99.94 E-value=6.4e-28 Score=199.94 Aligned_cols=74 Identities=54% Similarity=0.878 Sum_probs=71.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
-|.|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++|||||||
T Consensus 13 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~Lpgvv 86 (183)
T 1o4v_A 13 VPRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMV 86 (183)
T ss_dssp -CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHH
T ss_pred CCeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999985
No 12
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=99.92 E-value=3.1e-26 Score=185.95 Aligned_cols=69 Identities=32% Similarity=0.561 Sum_probs=66.0
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCcCCC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPGVV 188 (188)
+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|++++++ +||||+||++|||||||
T Consensus 1 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~---~ViIa~AG~aa~Lpgvv 69 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIAIAGLAAHLPGVV 69 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC---SEEEEEEESSCCHHHHH
T ss_pred CEEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC---CEEEEEcCchhhhHHHH
Confidence 4999999999999999999999999999999999999999999999987755 99999999999999985
No 13
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=99.91 E-value=7.9e-25 Score=198.68 Aligned_cols=74 Identities=23% Similarity=0.381 Sum_probs=71.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCC-eEEEEecCccCcCcCCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIIIVGDGVEAHLSGTL 188 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~Gv-kVIIAvAGmAAHLPGVV 188 (188)
.++|+|||||+||+|+|++|..+|++|||+||++|+||||+|+++.+|+++++++|. +||||+|||+|||||||
T Consensus 265 ~~~V~Ii~gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvv 339 (425)
T 2h31_A 265 QCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVM 339 (425)
T ss_dssp CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHH
T ss_pred CCeEEEEecCcccHHHHHHHHHHHHHcCCceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHH
Confidence 478999999999999999999999999999999999999999999999999999999 69999999999999985
No 14
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=94.65 E-value=0.043 Score=48.15 Aligned_cols=66 Identities=9% Similarity=0.031 Sum_probs=51.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++....-...+++.+.|++ |+++.+.....+-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 53 ~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~ 118 (387)
T 3uhj_A 53 KRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKT 118 (387)
T ss_dssp SEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHH
T ss_pred CEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHH
Confidence 4799999998876688999999999 99986666778888899999998888888999999999864
No 15
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=94.59 E-value=0.045 Score=46.60 Aligned_cols=67 Identities=15% Similarity=0.026 Sum_probs=54.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++..+.....++..+.|++-|+++.+.+.+-+-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 32 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv 98 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKT 98 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 4899999987766778999999999999886555566666667888888888889999999999763
No 16
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=93.77 E-value=0.1 Score=44.85 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=53.9
Q ss_pred CeEEEEeccCCCHH---HHHHHHHHHHHhCCCeeE-EEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLP---VMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlp---imekA~~vLeefGIpyDV-rVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++...... ..+++.+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 34 ~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 104 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSP 104 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHH
T ss_pred CEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcch
Confidence 47999999877655 899999999999987632 12357888899999999998999999999999763
No 17
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=93.23 E-value=0.21 Score=42.93 Aligned_cols=67 Identities=10% Similarity=0.166 Sum_probs=54.3
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeE-EEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlp--imekA~~vLeefGIpyDV-rVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++..+-.. ..++..+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.+.++|||+-|++.
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 110 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSP 110 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 47999998755333 789999999999987643 22458889999999999998889999999999763
No 18
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=93.00 E-value=0.14 Score=43.23 Aligned_cols=65 Identities=8% Similarity=-0.061 Sum_probs=53.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
+|.||++........++..+.|++-|+++.+..--.+-+.+.+.+. +.+.+.+.++|||+-|++.
T Consensus 36 ~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 36 RVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKA 100 (354)
T ss_dssp EEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHH
T ss_pred eEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHH
Confidence 7999999887667889999999999998766542466688888888 8787888999999999763
No 19
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=92.67 E-value=0.32 Score=43.25 Aligned_cols=66 Identities=12% Similarity=-0.004 Sum_probs=57.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCC---eEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~Gv---kVIIAvAGmA 181 (188)
.+|.||++....-...+++.+.|++-|+++++.++. ++.+.+.+.+..+.+.+.++ +++||+-|++
T Consensus 63 ~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGs 134 (390)
T 3okf_A 63 QKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGV 134 (390)
T ss_dssp CEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcH
Confidence 479999999987779999999999999998877665 57888999999988888888 6999998875
No 20
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=92.34 E-value=0.16 Score=44.00 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=53.8
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeE-EEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDL-PVMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDl-pimekA~~vLeefGIpyDV-rVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++..-.- ...+++.+.|++-|+++.+ .-...|-+.+.+.+.++.+++.++++|||+-|++.
T Consensus 32 ~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 100 (383)
T 3ox4_A 32 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSP 100 (383)
T ss_dssp CEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHH
Confidence 4799999864221 2578899999999998743 33568999999999999988889999999999864
No 21
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=91.83 E-value=0.15 Score=43.65 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=52.9
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeE-EEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDL-PVMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDl-pimekA~~vLeefGIpyDV-rVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++..... ...++..+.|++-|+++.+ .-...+.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 32 ~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 100 (386)
T 1rrm_A 32 QKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSP 100 (386)
T ss_dssp CEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHH
Confidence 3799999875532 3789999999999987642 22357888899999999888889999999999763
No 22
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=91.75 E-value=0.41 Score=41.60 Aligned_cols=65 Identities=15% Similarity=0.142 Sum_probs=51.9
Q ss_pred CeEEEEeccCCCH--HHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDL--PVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDl--pimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++..+=. ...+++.+.|++-|+++. +.+ ++-+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 113 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWV--EVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV 113 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEE--EECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHHcCCeEE--EecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH
Confidence 3799999854433 378999999999998764 444 4778888999999888899999999999763
No 23
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=91.25 E-value=0.18 Score=45.16 Aligned_cols=65 Identities=11% Similarity=0.056 Sum_probs=52.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
+|.||++..+.-...+++.+.|++-|+++.+.+.+-+-+-+.+.+.++.+++ +.++|||+-|++.
T Consensus 93 rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSv 157 (450)
T 1ta9_A 93 SAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKT 157 (450)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHH
T ss_pred EEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHH
Confidence 7999998877666789999999999998865666666666677777777777 8999999999763
No 24
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=91.12 E-value=0.39 Score=41.73 Aligned_cols=66 Identities=8% Similarity=0.002 Sum_probs=53.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh------CCCeeEEEEcC---CCChhHHHHHHHHHhhCC--C---eEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDF------GVPYEIKILSP---HQNRKGALSYALSAKERG--I---KIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeef------GIpyDVrVaSA---HRtP~~l~eyak~ae~~G--v---kVIIAvAGmA 181 (188)
.+|.||++....-...++..+.|++. |+.+...++.. +.+.+.+.+..+.+.+.+ + +++||+-|++
T Consensus 37 ~k~liVtd~~v~~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGs 116 (393)
T 1sg6_A 37 TTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGV 116 (393)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcH
Confidence 37999998765544788888899887 77776566666 888899999999888888 8 9999998875
No 25
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=89.80 E-value=2.9 Score=32.08 Aligned_cols=64 Identities=14% Similarity=0.114 Sum_probs=50.2
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...+|++++-+.+|- .+.+.+.+.++++|+ ++.+...+..++.-.++++.+..++++.||....
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 70 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLG 70 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESS
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 345799999877763 457788888999985 6777788889988888888888888988886643
No 26
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=89.34 E-value=3.1 Score=32.12 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|++++.+.++ ..+.+.+.+.+++.|+ ++.+...+..++...++++.+.+++++-+|....
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGY--SVLLANTAEDIVREREAVGQFFERRVDGLILAPS 73 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 34579999988877 4567778888889884 7778888999999999998888888988886553
No 27
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=88.39 E-value=0.5 Score=41.00 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=48.4
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlp--imekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||+|..+-.. ..++..+.|+ |+++ .+.+ ++.+.+.+.+.++.+.+.++++|||+-|++.
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~--g~~~--~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK--GMDV--LEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSV 118 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT--TSEE--EEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC--CCEE--EEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchH
Confidence 48999998765443 6778777776 7754 4554 5678888888888888889999999999763
No 28
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=88.31 E-value=2.1 Score=36.80 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=47.9
Q ss_pred CCCCCeEEEEec-cCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 112 KNDTPIVGIIME-SDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 112 ~~~~pkVaIIMG-S~SD----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...+.+|++|.- +.+| ..+.+.+.+..+++|-.+++.+......+++..++++.+.++|+++||+..
T Consensus 23 ~~~~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g 94 (356)
T 3s99_A 23 AEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTS 94 (356)
T ss_dssp ---CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECS
T ss_pred cCCCCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 334457988874 4567 345566667778899677888777766666778888888889999888864
No 29
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=88.22 E-value=3.2 Score=32.66 Aligned_cols=62 Identities=10% Similarity=0.151 Sum_probs=49.9
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCC---CeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGV---PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGI---pyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..|+|+. +.++ -.+++.+.+.|++.|. ...+-+..++..+++..++++...+++++.+|+..
T Consensus 3 ~~Igvi~-~~~~p~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~ 70 (295)
T 3lft_A 3 AKIGVLQ-FVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIA 70 (295)
T ss_dssp EEEEEEE-CSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEES
T ss_pred eEEEEEE-ccCChhHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 4688883 3333 3567788889999998 77777889999999999999998888899999764
No 30
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=87.59 E-value=0.59 Score=40.29 Aligned_cols=62 Identities=10% Similarity=0.064 Sum_probs=48.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++... ....+++.+.|++.++ .|.+ +|-+.+.+.+.++.+++.++++|||+-|++.
T Consensus 35 ~r~liVtd~~~-~~~~~~v~~~L~~~~~----~v~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~ 99 (353)
T 3hl0_A 35 SRALVLSTPQQ-KGDAEALASRLGRLAA----GVFSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGGGST 99 (353)
T ss_dssp CCEEEECCGGG-HHHHHHHHHHHGGGEE----EEECCCCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CEEEEEecCch-hhHHHHHHHHHhhCCc----EEecCcCCCCcHHHHHHHHHHHhccCCCEEEEeCCcHH
Confidence 36999998764 5678888888887543 3333 5667788888888888889999999999864
No 31
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=87.55 E-value=5.6 Score=30.51 Aligned_cols=64 Identities=13% Similarity=0.164 Sum_probs=45.0
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
|+.+|+++....+| ..+.+.+.+.+++.|. ++.+....-.+++..++++.+..++++-+|....
T Consensus 1 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 67 (290)
T 2fn9_A 1 MKGKMAIVISTLNNPWFVVLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPT 67 (290)
T ss_dssp --CEEEEEESCSSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CceEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 44578998876555 2456667778888885 5666677777888777887777778888877654
No 32
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=87.39 E-value=2.2 Score=36.71 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=52.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCC---CeEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERG---IKIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~G---vkVIIAvAGmA 181 (188)
.+|.||++....-...++..+.|++- +.++..+.. +|.+.+.+.+..+.+.+.| .+++||+-|++
T Consensus 35 ~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGs 105 (368)
T 2gru_A 35 DQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGL 105 (368)
T ss_dssp SEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChH
Confidence 47999999988877889999999876 777666654 6778888888887777777 69999998875
No 33
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.04 E-value=2.4 Score=34.96 Aligned_cols=47 Identities=9% Similarity=-0.065 Sum_probs=23.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA 166 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a 166 (188)
.+.||++|+|+.+ -+.+.+++.|-+-|. +|+-.+|+++++.+..++.
T Consensus 5 L~gKvalVTGas~--GIG~aiA~~la~~Ga----~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 5 LKNKVVIVTGAGS--GIGRAIAKKFALNDS----IVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp GTTCEEEEETTTS--HHHHHHHHHHHHTTC----EEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHcCC----EEEEEECCHHHHHHHHHHH
Confidence 4567888888876 234444444444443 2222344444444444333
No 34
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=86.74 E-value=2.3 Score=34.36 Aligned_cols=68 Identities=13% Similarity=0.037 Sum_probs=50.4
Q ss_pred CCCCeEEEEe-ccCCCHHHH-HHHHHHHHHhCC----CeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 113 NDTPIVGIIM-ESDSDLPVM-NDAARTLSDFGV----PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 113 ~~~pkVaIIM-GS~SDlpim-ekA~~vLeefGI----pyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
.+..+|+|+- -..--++-+ +...+.|++.|. +.++.+-.|...+..+.++++...++++++||+++--
T Consensus 6 ~~~~~igi~q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~~~~DlIiai~t~ 79 (302)
T 3lkv_A 6 AKTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATP 79 (302)
T ss_dssp -CCEEEEEEESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEESHH
T ss_pred cCCceEEEEEeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHhcCCcEEEEcCCH
Confidence 3456899873 222224433 446778888875 4788899999999999999999888999999988643
No 35
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=86.24 E-value=5.4 Score=30.64 Aligned_cols=66 Identities=18% Similarity=0.181 Sum_probs=50.3
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCC--ChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQ--NRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHR--tP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
..+|++++-+.+| ..+.+.+.+.++++|+ ++.+...+. .++.-.++++.+..++++.||.......
T Consensus 5 ~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~ 75 (304)
T 3o1i_D 5 DEKICAIYPHLKDSYWLSVNYGMVSEAEKQGV--NLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPH 75 (304)
T ss_dssp CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTC--EEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTT
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--eEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh
Confidence 3579999988777 3456677788888985 677788887 8888888888887788988887654433
No 36
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=86.03 E-value=8.7 Score=29.38 Aligned_cols=64 Identities=14% Similarity=0.128 Sum_probs=49.2
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|++++.+.+| ..+.+.+.+.+++.|+ ++.+...+..++...++++.+.+++++-+|....
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 73 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKY--EALVATSQNSRISEREQILEFVHLKVDAIFITTL 73 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 34579999988777 3456677788888886 6667788888988888888888888988887654
No 37
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=85.50 E-value=6.3 Score=31.14 Aligned_cols=63 Identities=13% Similarity=-0.004 Sum_probs=50.3
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCC----CeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGV----PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGI----pyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
+..|+|+. +-++ -++++.+.+.|++.|. +..+-+...+..+++..++++...+++++.+|+..
T Consensus 8 t~~IGvi~-~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~ 77 (302)
T 2qh8_A 8 TAKVAVSQ-IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIA 77 (302)
T ss_dssp CEEEEEEE-SSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEES
T ss_pred CcEEEEEE-eccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 45799884 4444 3456778888999987 77888889999999999999888888899998764
No 38
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=85.46 E-value=0.83 Score=39.51 Aligned_cols=62 Identities=13% Similarity=0.100 Sum_probs=47.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE---cCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL---SPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVa---SAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++... ....+++.+.|++.+ +.|. .+|-+.+.+.+.++.+++.++++|||+-|++.
T Consensus 37 ~r~liVtd~~~-~~~~~~v~~~L~~~~----~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 101 (358)
T 3jzd_A 37 KRALVLCTPNQ-QAEAERIADLLGPLS----AGVYAGAVMHVPIESARDATARAREAGADCAVAVGGGST 101 (358)
T ss_dssp SCEEEECCGGG-HHHHHHHHHHHGGGE----EEEECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred CeEEEEeCCcH-HHHHHHHHHHhccCC----EEEecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCcHH
Confidence 36999998865 567888888887653 3333 35667788888888888888999999999864
No 39
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=85.12 E-value=1.4 Score=38.78 Aligned_cols=65 Identities=9% Similarity=-0.012 Sum_probs=52.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCC---CeEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERG---IKIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~G---vkVIIAvAGmA 181 (188)
.+|.||++....- ..++..+.|++-|+++++.+.. ++.+.+.+.+..+.+.+.| .+++||+-|++
T Consensus 44 ~rvlIVtd~~v~~-~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGA 114 (368)
T ss_dssp SEEEEEECGGGHH-HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHH
T ss_pred CEEEEEECccHHH-HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChH
Confidence 4899999998754 5889999999999988777664 5667788888887776544 59999999875
No 40
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=84.94 E-value=2.4 Score=27.23 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=35.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA 166 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a 166 (188)
+|.|..-+ .=|.++++...|+++|++|++.-+.....+....++.+..
T Consensus 5 ~v~ly~~~--~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~ 52 (89)
T 3msz_A 5 KVKIYTRN--GCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQS 52 (89)
T ss_dssp CEEEEECT--TCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEEEcC--CChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHh
Confidence 35555433 4499999999999999999988877776666666766544
No 41
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=84.76 E-value=0.96 Score=38.45 Aligned_cols=64 Identities=9% Similarity=0.005 Sum_probs=45.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCC---eEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~Gv---kVIIAvAGmA 181 (188)
.+|.||++....-...++..+.| +-| .+++.+.. ++.+.+.+.+..+.+.+.++ +++||+-|++
T Consensus 32 ~~~liVtd~~~~~~~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGs 101 (354)
T 1xah_A 32 DQSFLLIDEYVNQYFANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGA 101 (354)
T ss_dssp SCEEEEEEHHHHHHHHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChH
Confidence 47999998754444677777788 777 66666664 57788999999998888888 9999999875
No 42
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=84.64 E-value=9.9 Score=29.67 Aligned_cols=63 Identities=11% Similarity=0.155 Sum_probs=48.7
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
..|++++-+.++ ..+.+.+.+.++++|+ ++.+......++.-.++++.+..++++.+|.....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 68 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN 68 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 468888876443 5667788888999985 66777888888888888888888889888876644
No 43
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=84.47 E-value=5.6 Score=31.91 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=42.9
Q ss_pred CeEEEEec-cCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIME-SDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMG-S~SD----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|++|.- ..+| ..+.+.+.+.++++|+ ++.+...+..+++..++++.+.+++++.||...
T Consensus 6 ~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~ 71 (296)
T 2hqb_A 6 GMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDV--DVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHG 71 (296)
T ss_dssp CEEEEECCCC----CCTHHHHHHHHHHHHHSCC--EEEEECCCCSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred cEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCC--eEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 47888884 3555 3456777778889985 666666666666777788888888999998864
No 44
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=84.45 E-value=8.7 Score=29.32 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=45.9
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...|++++.+.++ ..+.+.+.+.+++.|. ++.+......++...++++.+.+++++.+|....
T Consensus 7 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 72 (289)
T 1dbq_A 7 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCS 72 (289)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEec
Confidence 3479999876555 2356677778888885 5666777788888888888777788888776554
No 45
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=83.82 E-value=1.5 Score=35.33 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=48.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCee---EEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYE---IKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyD---VrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
|+.+|+|+.+.-.+-...+.|.+.|++.|++.+ +.|=+|-=.|--..++++ ..+++.+||..
T Consensus 1 m~~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~---~~~yDavIaLG 65 (156)
T 2b99_A 1 MTKKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLE---EEGCDIVMALG 65 (156)
T ss_dssp -CCEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHH---HSCCSEEEEEE
T ss_pred CCcEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 456899999998886667999999999999876 467777777777766664 45689888853
No 46
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=83.73 E-value=6.9 Score=26.03 Aligned_cols=60 Identities=17% Similarity=0.245 Sum_probs=49.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC---------eeEEEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVP---------YEIKILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIp---------yDVrVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
..-.|-.|+-+|.+-++....-|...|.+ |.|+| ++..+.++..+..+..+..|++.+|.
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~v-Gpf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQI-GAFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE-EEESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEE-CCcCCHHHHHHHHHHHHHcCCceEEE
Confidence 35789999999999999999999999987 44444 46678888888888888778887774
No 47
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=83.45 E-value=11 Score=28.44 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=46.4
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..|++++...+| ..+.+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 66 (255)
T 1byk_A 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQGY--DPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFG 66 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CEEEEEeCCCCCccHHHHHHHHHHHHHHcCC--EEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 469999877666 3556777888889985 666777777888888888888778888777654
No 48
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=83.45 E-value=10 Score=29.03 Aligned_cols=64 Identities=13% Similarity=0.215 Sum_probs=48.8
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|++++.+.+| ..+.+.+.+.+++.| |++.+...+..++...++++...+++++-+|....
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 72 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRG--YIGVLFDANADIEREKTLLRAIGSRGFDGLILQSF 72 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTT--CEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESS
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCC--CEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 34579999988766 345666777788887 47777888888888888888888888888877653
No 49
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=83.12 E-value=13 Score=28.70 Aligned_cols=63 Identities=13% Similarity=0.248 Sum_probs=50.0
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCee-EEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyD-VrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
....|++++.+.++ ..+.+.+.+.+++.|. + +.+...+..++.-.++++...+++++-+|...
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 75 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGY--TALISFSTNSDVKKYQNAIINFENNNVDGIITSA 75 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCC--CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc
Confidence 34579999988776 3456777888888885 6 77788899999988899888888898888765
No 50
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=82.77 E-value=8 Score=30.02 Aligned_cols=63 Identities=13% Similarity=0.083 Sum_probs=50.5
Q ss_pred CCCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
....|++++.+.++ ..+.+.+.+.+++.|. ++.+...+..++...++++....++++-+|...
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~ 78 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGK--TILIANTGGSSEREVEIWKMFQSHRIDGVLYVT 78 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 34579999987765 2788899999999984 677788888999888899888888888777654
No 51
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=82.69 E-value=12 Score=28.96 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=47.9
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|+++.-..+| ..+.+.+.+.+++.|+ ++.+...+..++...++++.+..++++-+|....
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 85 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGY--QLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTS 85 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 34579999876665 3556777788888885 6667777778888888888877788988887654
No 52
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=82.68 E-value=4.7 Score=29.31 Aligned_cols=53 Identities=15% Similarity=0.052 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029774 130 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 184 (188)
Q Consensus 130 imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHL 184 (188)
..+++.+.|++.|+++++.+.-.+-.| ...+++.+++.+++.+|.++-....+
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~v~~G~~--~~~I~~~a~~~~~DLIV~G~~g~~~~ 131 (155)
T 3dlo_A 79 TLSWAVSIIRKEGAEGEEHLLVRGKEP--PDDIVDFADEVDAIAIVIGIRKRSPT 131 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSSCH--HHHHHHHHHHTTCSEEEEECCEECTT
T ss_pred HHHHHHHHHHhcCCCceEEEEecCCCH--HHHHHHHHHHcCCCEEEECCCCCCCC
Confidence 455666777778999888765544444 35566667777899999987654444
No 53
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=82.53 E-value=9.2 Score=29.53 Aligned_cols=63 Identities=13% Similarity=0.134 Sum_probs=46.6
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...|++++...+| ..+.+.+.+.+++.|. ++.+......++...++++....++++-+|....
T Consensus 8 ~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 73 (285)
T 3c3k_A 8 TGMLLVMVSNIANPFCAAVVKGIEKTAEKNGY--RILLCNTESDLARSRSCLTLLSGKMVDGVITMDA 73 (285)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCC
T ss_pred CCEEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4579999976665 3456677788888885 5666677778888778888777788988887653
No 54
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=82.13 E-value=7.3 Score=30.48 Aligned_cols=63 Identities=8% Similarity=0.160 Sum_probs=49.4
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...|++++.+.+| ..+.+.+.+.+++.|. ++.+...+..++.-.++++.+.+++++-+|....
T Consensus 15 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 80 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHST--DVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRR 80 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCC
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecC
Confidence 3569999988776 5667888889999985 5667788888888888998888888988887654
No 55
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=81.68 E-value=3.5 Score=31.51 Aligned_cols=59 Identities=14% Similarity=-0.051 Sum_probs=35.5
Q ss_pred CCeEEEEeccCC----CHHHHHHHHHH-HHHhCCCeeEEEEcCCCC-----------hhHHHHHHHHHhhCCCeEEEEe
Q 029774 115 TPIVGIIMESDS----DLPVMNDAART-LSDFGVPYEIKILSPHQN-----------RKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 115 ~pkVaIIMGS~S----DlpimekA~~v-LeefGIpyDVrVaSAHRt-----------P~~l~eyak~ae~~GvkVIIAv 177 (188)
|++|.||.||.. =..+++.+.+. |++-|+ ++.++..... |+.+.++.+...+ ++.+|-+
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~--~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~--aD~ii~~ 76 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDS--QGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCN--ADGLIVA 76 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSE--EEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHH--CSEEEEE
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCC--eEEEEEccccCchhhcccccCcHHHHHHHHHHHH--CCEEEEE
Confidence 458999999963 34556666676 776675 4555554443 3466666665555 3444433
No 56
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=81.55 E-value=14 Score=28.05 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=46.1
Q ss_pred CCCeEEEEecc--CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMES--DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS--~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...+|++++.. .+| ..+.+.+.+.+++.|. ++.+......++...++++....++++.+|....
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~ 86 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 86 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTC--EEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecC
Confidence 34579999876 343 2456777788888886 5667777788888888888777778888877654
No 57
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=81.11 E-value=14 Score=29.58 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=47.5
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh--CCCeEEEEec
Q 029774 115 TPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE--RGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~--~GvkVIIAvA 178 (188)
+++|++++-+.++ ..+.+.+.+.++++|+ ++.+..+...++.-.+.++.+-. ++++.||...
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~ 70 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGL--DLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN 70 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCC--eEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 3579999998887 3556777788889986 55666888888887777777666 5888888764
No 58
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=81.02 E-value=15 Score=27.54 Aligned_cols=63 Identities=11% Similarity=0.158 Sum_probs=49.3
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
..|++++.+.+| ..+.+.+.+.+++.|. ++.+...+..++...++++.+.+++++-+|.....
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~ 68 (272)
T 3o74_A 3 RTLGFILPDLENPSYARIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCL 68 (272)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred eEEEEEeCCCcChhHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 469999988777 3456777788888876 66677888899988888888888889888876543
No 59
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=80.66 E-value=3.8 Score=34.95 Aligned_cols=62 Identities=8% Similarity=-0.008 Sum_probs=47.6
Q ss_pred EEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh-hHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 120 IIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 120 IIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP-~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.|.-+.||.+.++++.+.+++.|+.....+..++|++ +.+.++++.+.+-|+.+ |..++..+
T Consensus 111 ~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~-i~l~DT~G 173 (345)
T 1nvm_A 111 RVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC-IYMADSGG 173 (345)
T ss_dssp EEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE-EEEECTTC
T ss_pred EEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE-EEECCCcC
Confidence 3445888888899999999999998888887888874 67888888888777763 45555443
No 60
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=80.43 E-value=12 Score=30.33 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=46.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh--------------CCCeEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE--------------RGIKIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~--------------~GvkVIIAvAGmA 181 (188)
.+.++|.|. . .+.+.++..|.+.| +++.|. +|+++++.++++.... .+++++|..+|..
T Consensus 119 ~k~vlViGa-G--g~g~a~a~~L~~~G--~~V~v~--~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 119 GLRILLIGA-G--GASRGVLLPLLSLD--CAVTIT--NRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp TCEEEEECC-S--HHHHHHHHHHHHTT--CEEEEE--CSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHcC--CEEEEE--ECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCC
Confidence 457778887 3 68999999999999 466554 7999999888865321 3689999999865
Q ss_pred Cc
Q 029774 182 AH 183 (188)
Q Consensus 182 AH 183 (188)
.+
T Consensus 192 ~~ 193 (271)
T 1nyt_A 192 IS 193 (271)
T ss_dssp GG
T ss_pred CC
Confidence 43
No 61
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=80.37 E-value=6.1 Score=32.91 Aligned_cols=62 Identities=19% Similarity=0.124 Sum_probs=43.4
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
+.++.||.=..|. ....+++...|++.|+++++... ..++...++++++..++++++|++-|
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t---~~~~~a~~~~~~~~~~~~d~vvv~GG 89 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYAT---EKIGDATLEAERAMHENYDVLIAAGG 89 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEEC---CSTTHHHHHHHHHTTTTCSEEEEEEC
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEe---cCcchHHHHHHHHhhcCCCEEEEEcC
Confidence 3468888654443 46778999999999987776543 24456667777776677888887655
No 62
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=80.36 E-value=15 Score=29.09 Aligned_cols=64 Identities=14% Similarity=0.078 Sum_probs=45.7
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEE-cCCCChhHHHHHHHHHhhCCCeEEEEecCcc
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKIL-SPHQNRKGALSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVa-SAHRtP~~l~eyak~ae~~GvkVIIAvAGmA 181 (188)
.+|++++-..++- ...+.+.+.++++| |++.+. .+.-.++.-.+.++.+-.++++.||...--.
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~ 71 (316)
T 1tjy_A 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALG--IDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSP 71 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHT--CEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSS
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHhC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCH
Confidence 4799998766552 33455666778888 466666 4778888888888888788899888765433
No 63
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=80.02 E-value=7.9 Score=27.69 Aligned_cols=57 Identities=4% Similarity=-0.015 Sum_probs=38.2
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCC-CeEEE
Q 029774 117 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERG-IKIII 175 (188)
Q Consensus 117 kVaIIMGS~---SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~G-vkVII 175 (188)
.|.|.+-++ +.=|.+++|...|++.||+|+..=+..+ |+...++.+...... +.|||
T Consensus 17 ~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d--~~~~~~l~~~~g~~tvP~ifi 77 (111)
T 3zyw_A 17 PCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSD--EEVRQGLKAYSSWPTYPQLYV 77 (111)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC--HHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcCC--HHHHHHHHHHHCCCCCCEEEE
Confidence 577777543 6679999999999999999987655543 555455544322233 35665
No 64
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=80.02 E-value=11 Score=28.62 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=47.3
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++.+.+|- .+.+.+.+.+++.|. ++.+...+..++...++++.+.+++++-+|...
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~ 72 (277)
T 3e61_A 8 SKLIGLLLPDMSNPFFTLIARGVEDVALAHGY--QVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA 72 (277)
T ss_dssp --CEEEEESCTTSHHHHHHHHHHHHHHHHTTC--CEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 34699999877663 346677778888886 556788888999888899888888898888764
No 65
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=80.01 E-value=1.7 Score=36.61 Aligned_cols=42 Identities=14% Similarity=0.041 Sum_probs=23.8
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK 157 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~ 157 (188)
+.|++|.|| |+...-.-+....+.|++.|+ +|.+++.|..|.
T Consensus 2 ~~m~~vLiV-~g~~~~~~a~~l~~aL~~~g~--~V~~i~~~~~~~ 43 (259)
T 3rht_A 2 NAMTRVLYC-GDTSLETAAGYLAGLMTSWQW--EFDYIPSHVGLD 43 (259)
T ss_dssp ----CEEEE-ESSCTTTTHHHHHHHHHHTTC--CCEEECTTSCBC
T ss_pred CCCceEEEE-CCCCchhHHHHHHHHHHhCCc--eEEEeccccccc
Confidence 345689999 444344456667778888775 444455555443
No 66
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=79.68 E-value=3.7 Score=31.37 Aligned_cols=58 Identities=14% Similarity=0.246 Sum_probs=46.8
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVII 175 (188)
...|++++.+.+| ..+.+.+.+.+++.|. ++.+...+ .++...++++.+.+++++-+|
T Consensus 5 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~-~~~~~~~~~~~l~~~~vdgiI 65 (280)
T 3gyb_A 5 TQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGY--RLSVIDSL-TSQAGTDPITSALSMRPDGII 65 (280)
T ss_dssp CCEEEEEESCTTSGGGHHHHHHHHHHHGGGTC--EEEEECSS-SSCSSSCHHHHHHTTCCSEEE
T ss_pred cCEEEEEeCCCCChHHHHHHHHHHHHHHHCCC--EEEEEeCC-CchHHHHHHHHHHhCCCCEEE
Confidence 3579999988776 5667788888899985 77788888 888777788777788899888
No 67
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=79.56 E-value=1.6 Score=37.37 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=46.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCC---eEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~Gv---kVIIAvAGmA 181 (188)
.+|.||++....- ..++..+.|+ +++ + .+.. ++.+.+.+.+..+.+.+.++ +++||+-|++
T Consensus 29 ~kvliVtd~~v~~-~~~~v~~~L~-~~~--~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGs 95 (348)
T 1ujn_A 29 GPAALLFDRRVEG-FAQEVAKALG-VRH--L-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGT 95 (348)
T ss_dssp SCEEEEEEGGGHH-HHHHHHHHHT-CCC--E-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHH-HHHHHHHHhc-cCe--E-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcH
Confidence 4799999987665 8888888887 554 4 4443 67788888888887776665 8999998875
No 68
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=79.42 E-value=13 Score=29.06 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=46.6
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
+..|++++-+.++- .+.+.+.+.++++|+ ++.+...+..+++-.++++.+.+++++.||...-
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~ 68 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGY--KTDLQYADDDIPNQLSQIENMVTKGVKVLVIASI 68 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCC--EEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 35789998876652 345667778888875 6667778888888888888777778888887553
No 69
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=79.04 E-value=14 Score=28.43 Aligned_cols=61 Identities=8% Similarity=0.063 Sum_probs=43.6
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 117 IVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 117 kVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.|++++-..+|- .+.+.+.+.+++.|. +++.+...+..++...++++.+..++++.+|...
T Consensus 4 ~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~ 67 (309)
T 2fvy_A 4 RIGVTIYKYDDNFMSVVRKAIEQDAKAAPD-VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINL 67 (309)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHTCTT-EEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEEeccCCcHHHHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 688888765552 455666777778874 3677777777888877888777777888777654
No 70
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=79.02 E-value=19 Score=27.46 Aligned_cols=61 Identities=16% Similarity=0.393 Sum_probs=43.7
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
+.|++++.+.++- .+++.+.+.+++.| |++-+...+..+++-.++++....++++-+|...
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 65 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLG--YNLVVLDSQNNPAKELANVQDLTVRGTKILLINP 65 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcC--cEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4688888766553 45667777888888 5666677777777777777777777788777654
No 71
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=78.91 E-value=12 Score=29.10 Aligned_cols=62 Identities=18% Similarity=0.205 Sum_probs=44.6
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|++++.+.+| ..+.+.+.+.+++.|. ++.+......+++..++++.+..++++-+|....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 67 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPV 67 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCS
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 368898887665 2345667778888885 5666677778888778887776777888777543
No 72
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=78.62 E-value=18 Score=27.51 Aligned_cols=64 Identities=9% Similarity=0.119 Sum_probs=45.8
Q ss_pred CCeEEEEeccCC--C---HHHHHHHHHHHHHhCCCeeEEEEcC--CCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 115 TPIVGIIMESDS--D---LPVMNDAARTLSDFGVPYEIKILSP--HQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 115 ~pkVaIIMGS~S--D---lpimekA~~vLeefGIpyDVrVaSA--HRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
...|++++-+.+ | ..+.+.+.+.+++.|. ++.+... +..++...++++.+..++++.+|.....
T Consensus 5 ~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~ 75 (289)
T 3brs_A 5 QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEI--KLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAAD 75 (289)
T ss_dssp CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSC
T ss_pred CcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCC--EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 347999987665 4 2345667778888884 6666655 6788888888887777889888876543
No 73
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=78.61 E-value=6.1 Score=26.18 Aligned_cols=43 Identities=14% Similarity=0.126 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC---CChhHHHHHHHHHhhC
Q 029774 127 DLPVMNDAARTLSDFGVPYEIKILSPH---QNRKGALSYALSAKER 169 (188)
Q Consensus 127 DlpimekA~~vLeefGIpyDVrVaSAH---RtP~~l~eyak~ae~~ 169 (188)
-=|.+++|...|++.||+|+..=+..+ ..|+...++.+.....
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~ 58 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRD 58 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCS
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCC
Confidence 458999999999999999987766533 4566666666544333
No 74
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=78.56 E-value=9 Score=26.97 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=37.8
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCC-eEEE
Q 029774 117 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 175 (188)
Q Consensus 117 kVaIIMGS~---SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~Gv-kVII 175 (188)
+|.|.+-++ ..=|.+++|.+.|+++||+|+..=+.- .|+...++.+......+ .|||
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~--~~~~~~~l~~~~g~~tvP~ifi 79 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILE--NEMLRQGLKEYSNWPTFPQLYI 79 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHHHHHHTCSSSCEEEE
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCC--CHHHHHHHHHHHCCCCCCeEEE
Confidence 588887664 467899999999999999997765543 35544444433333333 5555
No 75
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=78.55 E-value=7.1 Score=29.39 Aligned_cols=61 Identities=16% Similarity=0.221 Sum_probs=42.7
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEc--CCCChhHHHHHHHHHhhCC-CeEEEEec
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILS--PHQNRKGALSYALSAKERG-IKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaS--AHRtP~~l~eyak~ae~~G-vkVIIAvA 178 (188)
++|+++.-+.++ ..+.+.+.+.+++.|. ++.+.. .+..+++..+.++.+.+++ ++-+|...
T Consensus 1 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~ 67 (276)
T 3ksm_A 1 PKLLLVLKGDSNAYWRQVYLGAQKAADEAGV--TLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAP 67 (276)
T ss_dssp CEEEEECSCSSSTHHHHHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 367888876665 3456677778888886 444554 5677877777777777777 88877765
No 76
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=78.42 E-value=16 Score=29.11 Aligned_cols=62 Identities=13% Similarity=0.157 Sum_probs=49.7
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++.+.++ ..+++.+.+.+++.|. ++.+...+..++...++++....++++-+|...
T Consensus 62 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~ 126 (339)
T 3h5o_A 62 SRTVLVLIPSLANTVFLETLTGIETVLDAAGY--QMLIGNSHYDAGQELQLLRAYLQHRPDGVLITG 126 (339)
T ss_dssp -CEEEEEESCSTTCTTHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeC
Confidence 3579999877665 5778888899999985 677788899999999999888888888777654
No 77
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=77.81 E-value=10 Score=29.02 Aligned_cols=64 Identities=16% Similarity=0.076 Sum_probs=48.0
Q ss_pred CCCeEEEEecc-----CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMES-----DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS-----~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|++++.+ .+| ..+.+.+.+.+++.|. ++.+...+-.++...++++.+.+++++-+|....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~ 78 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGY--ALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYS 78 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCC
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 34579999887 444 2556777888889985 6677778877888788888887888988887543
No 78
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=77.64 E-value=14 Score=30.22 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=39.2
Q ss_pred CCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCCh---------hHHHHHHHHHhhCCCeEEEEe
Q 029774 115 TPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQNR---------KGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 115 ~pkVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVaSAHRtP---------~~l~eyak~ae~~GvkVIIAv 177 (188)
+++|.||.||..- ...++.+.+.|++-|+ ++.++.....| +.+.++.+...+ ++.||-+
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~--eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~--AD~iI~~ 105 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGA--EVKVFDPSGLPLPDAAPVSHPKVQELRELSIW--SEGQVWV 105 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTC--EEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH--CSEEEEE
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCC--EEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH--CCEEEEE
Confidence 4589999999752 3456777777887776 55666655544 567777766665 4555544
No 79
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=77.63 E-value=13 Score=25.55 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhCCCe---eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029774 129 PVMNDAARTLSDFGVPY---EIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 129 pimekA~~vLeefGIpy---DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLP 185 (188)
...+++.+.+++.|+++ +..+..- .| ...+++.+++.+++.+|.++-....+.
T Consensus 70 ~~l~~~~~~~~~~g~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~~~ 125 (147)
T 3hgm_A 70 EIAVQAKTRATELGVPADKVRAFVKGG--RP--SRTIVRFARKRECDLVVIGAQGTNGDK 125 (147)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEES--CH--HHHHHHHHHHTTCSEEEECSSCTTCCS
T ss_pred HHHHHHHHHHHhcCCCccceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCcccc
Confidence 34566677778889998 7777643 23 455666667778999999876554443
No 80
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=77.48 E-value=13 Score=26.38 Aligned_cols=51 Identities=24% Similarity=0.326 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029774 131 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 131 mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLP 185 (188)
++++.+.++..|++++..+..- +-...+++.+++.+++.||.++-+...+.
T Consensus 85 l~~~~~~~~~~g~~~~~~v~~G----~~~~~I~~~a~~~~~dlIV~G~~g~~~~~ 135 (162)
T 1mjh_A 85 MENIKKELEDVGFKVKDIIVVG----IPHEEIVKIAEDEGVDIIIMGSHGKTNLK 135 (162)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCSSCCT
T ss_pred HHHHHHHHHHcCCceEEEEcCC----CHHHHHHHHHHHcCCCEEEEcCCCCCCcc
Confidence 4455555666799888776542 23445566666778999888876544443
No 81
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=77.12 E-value=20 Score=28.44 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=49.6
Q ss_pred CCCeEEEEecc--CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMES--DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS--~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|+++... .++ ..+.+.+.+.+++.|. ++-+...+..++.-.++++....++++-+|....
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 128 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPR 128 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTC--EEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 34579999987 444 3567788888899985 6777788889998888888888888988887653
No 82
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=76.94 E-value=17 Score=28.72 Aligned_cols=63 Identities=10% Similarity=0.096 Sum_probs=45.8
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCC--CeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERG--IKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~G--vkVIIAvAG 179 (188)
...|+++..+.+| ..+.+.+.+.+++.|+. +.+....-.++...++++.+.+++ ++.+|....
T Consensus 5 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~ 72 (332)
T 2rjo_A 5 QTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLP--YVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPN 72 (332)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCC--EEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred ccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCE--EEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCC
Confidence 3479999877665 24566777888889864 556677778888777887776777 888887543
No 83
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=76.85 E-value=21 Score=27.42 Aligned_cols=61 Identities=15% Similarity=0.205 Sum_probs=44.5
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|+++.-+.+| ..+.+.+.+.++++| |++.+... ..+++-.++++.+.+++++.||....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g--~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~ 66 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLG--FEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTP 66 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHT--EEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcC--CEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 368888887766 345666777888887 45666666 48888888888887778888877654
No 84
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=76.59 E-value=26 Score=27.63 Aligned_cols=65 Identities=9% Similarity=0.117 Sum_probs=47.6
Q ss_pred CCeEEEEecc-CC-CH--HHHHHHHHHHHHhCCCeeEEEEcCC--CChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 115 TPIVGIIMES-DS-DL--PVMNDAARTLSDFGVPYEIKILSPH--QNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 115 ~pkVaIIMGS-~S-Dl--pimekA~~vLeefGIpyDVrVaSAH--RtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
...|++++.+ .+ ++ .+.+.+.+.+++.|..+.+.+...+ -.++.-.++++.+..++++-||. .+.
T Consensus 43 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi-~~~ 113 (342)
T 1jx6_A 43 PIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIF-TLD 113 (342)
T ss_dssp CEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTCSEEEE-CCS
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEE-eCC
Confidence 3479999876 33 33 5677888889999987777665566 57777778887777788988887 443
No 85
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=76.48 E-value=21 Score=27.63 Aligned_cols=61 Identities=15% Similarity=0.153 Sum_probs=45.6
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..|++++-..+| ..+.+.+.+.+++.|. ++.+......++...++++.+..++++-+|...
T Consensus 17 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 80 (289)
T 2fep_A 17 TTVGVIIPDISSIFYSELARGIEDIATMYKY--NIILSNSDQNMEKELHLLNTMLGKQVDGIVFMG 80 (289)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CeEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec
Confidence 479999976555 3456677778888885 566667777888888888887778898887654
No 86
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=76.34 E-value=24 Score=28.16 Aligned_cols=63 Identities=13% Similarity=0.072 Sum_probs=49.2
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
....|++++.+.+| ..+.+.+.+.+++.|. ++.+...+..++...++++...+++++-+|...
T Consensus 67 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~ 132 (344)
T 3kjx_A 67 RVNLVAVIIPSLSNMVFPEVLTGINQVLEDTEL--QPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAG 132 (344)
T ss_dssp CCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSS--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEEC
Confidence 34579999987776 4567777888888875 667778888999988999888888888777754
No 87
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=76.25 E-value=12 Score=30.83 Aligned_cols=27 Identities=19% Similarity=0.095 Sum_probs=18.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.||+||+|+.+ -+.+.+++.|-+-|.
T Consensus 8 ~gKvalVTGas~--GIG~aia~~la~~Ga 34 (255)
T 4g81_D 8 TGKTALVTGSAR--GLGFAYAEGLAAAGA 34 (255)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 467889988887 345556666666664
No 88
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=76.15 E-value=19 Score=27.75 Aligned_cols=63 Identities=8% Similarity=0.010 Sum_probs=45.3
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHH---HHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS---YALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~e---yak~ae~~GvkVIIAvAG 179 (188)
...|++++-..+| ..+.+.+.+.+++.|. ++.+....-.++...+ +++.+..++++-+|....
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 76 (290)
T 2rgy_A 8 LGIIGLFVPTFFGSYYGTILKQTDLELRAVHR--HVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISH 76 (290)
T ss_dssp CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTC--EEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCeEEEEeCCCCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecC
Confidence 3579999876555 3456677778888885 5667777777777777 777777778888887643
No 89
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=76.02 E-value=20 Score=27.52 Aligned_cols=62 Identities=10% Similarity=0.050 Sum_probs=42.6
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEc-CCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaS-AHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|+++....++ ..+.+.+.+.++++| |++.+.. .+..+++..++++.+..++++.+|....
T Consensus 5 ~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~ 70 (303)
T 3d02_A 5 KTVVNISKVDGMPWFNRMGEGVVQAGKEFN--LNASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPN 70 (303)
T ss_dssp EEEEEECSCSSCHHHHHHHHHHHHHHHHTT--EEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred eEEEEEeccCCChHHHHHHHHHHHHHHHcC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 468888765544 244566677788887 4665543 6778888778887777778888776543
No 90
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=75.98 E-value=2.9 Score=33.93 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=28.5
Q ss_pred CCCeEEEEeccCCCH-----HHHHHHHHHHHHhCCCeeEEEEcC
Q 029774 114 DTPIVGIIMESDSDL-----PVMNDAARTLSDFGVPYEIKILSP 152 (188)
Q Consensus 114 ~~pkVaIIMGS~SDl-----pimekA~~vLeefGIpyDVrVaSA 152 (188)
|+.+|+|++|+.|+. ..++.+.+.|++.|. ++..+..
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~--~v~~i~~ 53 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGI--DAHPFDP 53 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTC--EEEEECT
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCC--EEEEEeC
Confidence 567899999999983 457888889999986 5555553
No 91
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=75.71 E-value=10 Score=26.23 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCC-CeeEEEEcCCCChhHHHHHHH-HHhhCCCeEEEEecCccCcCcC
Q 029774 131 MNDAARTLSDFGV-PYEIKILSPHQNRKGALSYAL-SAKERGIKIIIVGDGVEAHLSG 186 (188)
Q Consensus 131 mekA~~vLeefGI-pyDVrVaSAHRtP~~l~eyak-~ae~~GvkVIIAvAGmAAHLPG 186 (188)
++++.+.+++.|+ +++..+..- +-..++++ .+++.+++.+|.++-....+.+
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~~g----~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~ 124 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEISYG----IPKHTIEDYAKQHPEIDLIVLGATGTNSPHR 124 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEE----CHHHHHHHHHHHSTTCCEEEEESCCSSCTTT
T ss_pred HHHHHHHHHhcCCcceEEEEecC----ChHHHHHHHHHhhcCCCEEEECCCCCCCcce
Confidence 4455556666788 888777643 23445666 6667889999988765554443
No 92
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=75.28 E-value=22 Score=28.81 Aligned_cols=60 Identities=10% Similarity=0.159 Sum_probs=41.3
Q ss_pred CeEEEEe--ccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIM--ESDSDL----PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIM--GS~SDl----pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|++|. |..+|. .+.+.+.+.++++|+ ++.+...+- +.+..++++.+.+++++.||...
T Consensus 5 ~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~--~~~~~~~~~-~~~~~~~l~~l~~~~~dgIi~~~ 70 (318)
T 2fqx_A 5 FVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNA--KCKYVTAST-DAEYVPSLSAFADENMGLVVACG 70 (318)
T ss_dssp CEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTC--EEEEEECCS-GGGHHHHHHHHHHTTCSEEEEES
T ss_pred cEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCC--eEEEEeCCC-HHHHHHHHHHHHHcCCCEEEECC
Confidence 4798887 467773 345566777888985 556655543 34456777777788899998864
No 93
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=75.01 E-value=15 Score=28.12 Aligned_cols=60 Identities=13% Similarity=0.012 Sum_probs=35.0
Q ss_pred CCCeEEEEeccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCC-----------ChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSDL----PVMNDAARTLSDFGVPYEIKILSPHQ-----------NRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SDl----pimekA~~vLeefGIpyDVrVaSAHR-----------tP~~l~eyak~ae~~GvkVIIAvA 178 (188)
||++|.||.||...- ..++.+.+.|+ -| .++.++.... .|+.+.++.+..++ ++.||-++
T Consensus 1 MM~kilii~gS~r~~s~t~~la~~~~~~~~-~~--~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~--AD~iV~~s 75 (192)
T 3fvw_A 1 MSKRILFIVGSFSEGSFNRQLAKKAETIIG-DR--AQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQE--ADAIWIFS 75 (192)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHHHHT-TS--SEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHH--CSEEEEEC
T ss_pred CCCEEEEEEcCCCCCCHHHHHHHHHHHhcC-CC--CEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHh--CCEEEEEC
Confidence 456899999998643 33444444443 23 4566665543 34567777777666 55666554
No 94
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=75.00 E-value=25 Score=26.67 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=50.0
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
..|++++.+.+|. .+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-+|....
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 80 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGY--SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPT 80 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCS
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecc
Confidence 5799999887762 567788888889886 6777888889998888998888888988887654
No 95
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=74.96 E-value=8.4 Score=30.44 Aligned_cols=63 Identities=10% Similarity=0.051 Sum_probs=38.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHH-hCCCeeEEEEcCC-----------CChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSD-FGVPYEIKILSPH-----------QNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLee-fGIpyDVrVaSAH-----------RtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
|+++|+||.||.+.-..-++.++.+.+ +.-..++.++... ..|+.+.++.+..++ ++.||-+.
T Consensus 1 M~k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~--aD~~ii~t 75 (190)
T 3u7r_A 1 MVKTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEH--SDAVLAIT 75 (190)
T ss_dssp -CEEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHT--SSEEEEEC
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHh--CCcEEEec
Confidence 566899999998876555555554433 2334677776642 246677777776655 44444443
No 96
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=74.88 E-value=2 Score=37.23 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=43.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
+|.||+|... ....+++.+. |+--..+.-..+|-+.+.+.+.++.+++.++++|||+-|++.
T Consensus 39 rvliVtd~~~-~~~~~~v~~~---L~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~ 100 (364)
T 3iv7_A 39 KVMVIAGERE-MSIAHKVASE---IEVAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGST 100 (364)
T ss_dssp SEEEECCGGG-HHHHHHHTTT---SCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHH
T ss_pred EEEEEECCCH-HHHHHHHHHH---cCCCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHH
Confidence 6999999864 4444444444 441122223346778888999998888899999999999864
No 97
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=74.60 E-value=14 Score=24.17 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=37.3
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC---hhHHHHHHHHHhhCCCeEEE
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN---RKGALSYALSAKERGIKIII 175 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRt---P~~l~eyak~ae~~GvkVII 175 (188)
.++++|-|...+ .=+.++++...|+++|++|+..-+..... ++...++.+.....++-+++
T Consensus 9 ~~M~~v~ly~~~--~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~ 72 (92)
T 3ic4_A 9 QGMAEVLMYGLS--TCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVV 72 (92)
T ss_dssp TTCSSSEEEECT--TCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEE
T ss_pred CCCceEEEEECC--CChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEE
Confidence 344456666544 34899999999999999998766653221 22235555444334454444
No 98
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=74.10 E-value=12 Score=29.08 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=48.2
Q ss_pred CCCeEEEEecc-----CCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMES-----DSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS-----~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
....|++++.. .+| ..+.+.+.+.+++.|. ++.+...+..++...++++.+.+++++-+|...
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 91 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGY--STRMTVSENSGDLYHEVKTMIQSKSVDGFILLY 91 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTC--EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 34579999987 455 3556778888899985 667777888888888888888888898888654
No 99
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=74.08 E-value=28 Score=26.89 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=45.6
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCC--CChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPH--QNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAH--RtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|++++.+.+|- .+.+.+.+.++++|+ ++.+.... ..+++..++++.+..++++.||....
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~ 70 (297)
T 3rot_A 4 DKYYLITHGSQDPYWTSLFQGAKKAAEELKV--DLQILAPPGANDVPKQVQFIESALATYPSGIATTIP 70 (297)
T ss_dssp CEEEEECSCCCSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCC
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCc--EEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 3688888877552 345667778888885 56666665 68888888888888888988886544
No 100
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=73.99 E-value=14 Score=29.26 Aligned_cols=70 Identities=11% Similarity=0.023 Sum_probs=44.6
Q ss_pred CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-----------------------ChhHHHHHHHHHh
Q 029774 111 GKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ-----------------------NRKGALSYALSAK 167 (188)
Q Consensus 111 ~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHR-----------------------tP~~l~eyak~ae 167 (188)
+..++.++++|+|..+.--+...+++.|-+-|. .+-+++-.+ .++.+.++++...
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELG 98 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHH
Confidence 334556899999988765567777777777775 344443322 3445555555443
Q ss_pred h--CCCeEEEEecCccC
Q 029774 168 E--RGIKIIIVGDGVEA 182 (188)
Q Consensus 168 ~--~GvkVIIAvAGmAA 182 (188)
+ ..++++|-.||...
T Consensus 99 ~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 99 KVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp HHCSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCccCC
Confidence 2 35899999999754
No 101
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=73.71 E-value=34 Score=28.93 Aligned_cols=61 Identities=16% Similarity=0.112 Sum_probs=40.6
Q ss_pred CCCCeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEEcCCCC----------hhHHHHHHHHHhhCCCeEEEEe
Q 029774 113 NDTPIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKILSPHQN----------RKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 113 ~~~pkVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVaSAHRt----------P~~l~eyak~ae~~GvkVIIAv 177 (188)
.++++|.||.||... ...++.+.+.|++.|+ ++.++..... |+.+.++.+...+ ++.||-+
T Consensus 56 ~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~--eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~--ADgiV~a 130 (279)
T 2fzv_A 56 APPVRILLLYGSLRARSFSRLAVEEAARLLQFFGA--ETRIFDPSDLPLPDQVQSDDHPAVKELRALSEW--SEGQVWC 130 (279)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTC--EEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHH--CSEEEEE
T ss_pred CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCC--EEEEEehhcCCCCccCccCCCHHHHHHHHHHHH--CCeEEEE
Confidence 345689999999752 4567778888888887 5555555443 4667777776665 4444443
No 102
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=73.08 E-value=11 Score=24.74 Aligned_cols=56 Identities=16% Similarity=0.062 Sum_probs=36.4
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH-hhCCCeEE
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGIKII 174 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a-e~~GvkVI 174 (188)
+|+++|.+... +.=+.++++...|++.|++|+..=+. ++...++.+.. ...++-++
T Consensus 3 ~mm~~v~~y~~--~~C~~C~~~~~~L~~~~i~~~~vdv~----~~~~~~l~~~~~~~~~vP~l 59 (89)
T 2klx_A 3 GSMKEIILYTR--PNCPYCKRARDLLDKKGVKYTDIDAS----TSLRQEMVQRANGRNTFPQI 59 (89)
T ss_dssp CCCCCEEEESC--SCCTTTHHHHHHHHHHTCCEEEECSC----HHHHHHHHHHHHSSCCSCEE
T ss_pred CCcceEEEEEC--CCChhHHHHHHHHHHcCCCcEEEECC----HHHHHHHHHHhCCCCCcCEE
Confidence 34556666543 33478999999999999998654443 66666676554 44445443
No 103
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=73.07 E-value=14 Score=29.93 Aligned_cols=60 Identities=18% Similarity=0.125 Sum_probs=44.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh-------------------hCCCeEEE
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-------------------ERGIKIII 175 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae-------------------~~GvkVII 175 (188)
..+.++|+|.. .+.+.++..|.+.| ++.| .+|+++++.++++... -.+++++|
T Consensus 127 ~~k~vlV~GaG---giG~aia~~L~~~G---~V~v--~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilV 198 (287)
T 1nvt_A 127 KDKNIVIYGAG---GAARAVAFELAKDN---NIII--ANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIII 198 (287)
T ss_dssp CSCEEEEECCS---HHHHHHHHHHTSSS---EEEE--ECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEE
T ss_pred CCCEEEEECch---HHHHHHHHHHHHCC---CEEE--EECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEE
Confidence 34678888974 88999999999988 4444 5899998888765432 13579999
Q ss_pred EecCccC
Q 029774 176 VGDGVEA 182 (188)
Q Consensus 176 AvAGmAA 182 (188)
..+|...
T Consensus 199 n~ag~~~ 205 (287)
T 1nvt_A 199 NATPIGM 205 (287)
T ss_dssp ECSCTTC
T ss_pred ECCCCCC
Confidence 9998654
No 104
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=72.98 E-value=21 Score=29.34 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=42.3
Q ss_pred CeEEEEeccC----CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESD----SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~----SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.++.||.=-. .-....+++...|++.|+++++.. -..++...++++++.+ +++++|++-|
T Consensus 9 ~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~---t~~~~~a~~~~~~~~~-~~d~vv~~GG 72 (304)
T 3s40_A 9 EKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILH---TKEQGDATKYCQEFAS-KVDLIIVFGG 72 (304)
T ss_dssp SSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEE---CCSTTHHHHHHHHHTT-TCSEEEEEEC
T ss_pred CEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEE---ccCcchHHHHHHHhhc-CCCEEEEEcc
Confidence 4677775333 224677889999999999887764 3456777888877654 7888877655
No 105
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=72.66 E-value=18 Score=25.88 Aligned_cols=51 Identities=14% Similarity=0.027 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCeeE--EEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029774 130 VMNDAARTLSDFGVPYEI--KILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 184 (188)
Q Consensus 130 imekA~~vLeefGIpyDV--rVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHL 184 (188)
.++++.+.++..|++++. .+..- +-...+++.+++.+++.||.++-....+
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~~~~g----~~~~~I~~~a~~~~~DlIV~G~~g~~~~ 131 (170)
T 2dum_A 79 KLQEKAEEVKRAFRAKNVRTIIRFG----IPWDEIVKVAEEENVSLIILPSRGKLSL 131 (170)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCCCC-
T ss_pred HHHHHHHHHHHcCCceeeeeEEecC----ChHHHHHHHHHHcCCCEEEECCCCCCcc
Confidence 345555666677998887 66532 2344556666677899888887654443
No 106
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=72.28 E-value=18 Score=27.38 Aligned_cols=61 Identities=8% Similarity=0.000 Sum_probs=42.3
Q ss_pred CeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..|++++...+| ..+.+.+.+.+++.|. ++.+....-.++...++++.+..++++-+|...
T Consensus 4 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~ 67 (275)
T 3d8u_A 4 YSIALIIPSLFEKACAHFLPSFQQALNKAGY--QLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFG 67 (275)
T ss_dssp CEEEEEESCSSCHHHHHHHHHHHHHHHHTSC--EECCEECTTCHHHHHHHHHHHHTSCCCCEEEES
T ss_pred eEEEEEeCCCccccHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeC
Confidence 468888876555 3455667777888885 455556667777777788777777787766554
No 107
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=72.25 E-value=23 Score=26.41 Aligned_cols=66 Identities=14% Similarity=0.091 Sum_probs=39.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCChhHHHHHHHHHhhC---
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKER--- 169 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA----------------------HRtP~~l~eyak~ae~~--- 169 (188)
+.++++|+|..+ -+...+++.|-+-|-.+.+.+++- -..++.+.++++...+.
T Consensus 2 ~~k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 2 SPGSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp CCSEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 346888888887 456667777777663234433321 12344555555444321
Q ss_pred -CCeEEEEecCccC
Q 029774 170 -GIKIIIVGDGVEA 182 (188)
Q Consensus 170 -GvkVIIAvAGmAA 182 (188)
+++++|-.||...
T Consensus 80 ~~id~li~~Ag~~~ 93 (250)
T 1yo6_A 80 DGLSLLINNAGVLL 93 (250)
T ss_dssp GCCCEEEECCCCCC
T ss_pred CCCcEEEECCcccC
Confidence 6899999998654
No 108
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=72.20 E-value=20 Score=28.09 Aligned_cols=27 Identities=7% Similarity=0.118 Sum_probs=19.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 6 ~~k~vlVTGas~--GIG~aia~~l~~~G~ 32 (252)
T 3h7a_A 6 RNATVAVIGAGD--YIGAEIAKKFAAEGF 32 (252)
T ss_dssp CSCEEEEECCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 457889999887 456667777776674
No 109
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=71.85 E-value=5 Score=27.17 Aligned_cols=58 Identities=16% Similarity=0.005 Sum_probs=44.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCe---------eEEEEcCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPY---------EIKILSPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpy---------DVrVaSAHRtP~~l~eyak~ae~~GvkVII 175 (188)
.-.|-.|+-+|.+-++....-|...|++. .|+ +++..+.++..+..+..++.|++-+|
T Consensus 9 ~~~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~-vGpf~s~~~A~~~~~~L~~~g~~~~i 75 (81)
T 1uta_A 9 RWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVV-IGPVKGKENADSTLNRLKMAGHTNCI 75 (81)
T ss_dssp BCCCBCCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEE-ESSCBTTTHHHHHHHHHHHHCCSCCB
T ss_pred cEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEEeCCcEEEEE-ECCcCCHHHHHHHHHHHHHcCCCcEE
Confidence 46678899999999999999999999873 333 35667778888888777776764433
No 110
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=71.74 E-value=11 Score=30.06 Aligned_cols=55 Identities=13% Similarity=0.152 Sum_probs=29.8
Q ss_pred cccCCCCCCCCCCCeEEEE-ec-----cCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhH
Q 029774 103 ENANGDSTGKNDTPIVGII-ME-----SDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKG 158 (188)
Q Consensus 103 ~~~~g~~~~~~~~pkVaII-MG-----S~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~ 158 (188)
-+++|+-+..+|. .+-+. .. +...-|.+.++.-.|++.||+|+...+.....|+.
T Consensus 5 ~~~~~~~~~~~~~-~i~ly~~~~~~~~~~~~~p~~~rv~~~L~~~gi~ye~~~v~~~~~~~~ 65 (267)
T 2ahe_A 5 MPLNGLKEEDKEP-LIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAD 65 (267)
T ss_dssp -----------CC-CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTSCCHH
T ss_pred cccccccccccCC-CEEEEEecCCCccCCCCCchHHHHHHHHHHcCCCCEEEEeCcccChHH
Confidence 3567875555553 44333 22 22334889999999999999999988876433433
No 111
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=71.71 E-value=31 Score=26.25 Aligned_cols=63 Identities=6% Similarity=-0.050 Sum_probs=41.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------CChhHHHHHHHHHhh----CCCeEEE
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------QNRKGALSYALSAKE----RGIKIII 175 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH---------------RtP~~l~eyak~ae~----~GvkVII 175 (188)
+.++++|+|..+ -+...+++.|-+-|. ++.+++-. ..++.+.++++...+ .+++++|
T Consensus 2 ~~k~vlITGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv 77 (236)
T 1ooe_A 2 SSGKVIVYGGKG--ALGSAILEFFKKNGY--TVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 77 (236)
T ss_dssp CCEEEEEETTTS--HHHHHHHHHHHHTTE--EEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 457899999988 567788888888773 44444311 123445555554432 4689999
Q ss_pred EecCcc
Q 029774 176 VGDGVE 181 (188)
Q Consensus 176 AvAGmA 181 (188)
-.||..
T Consensus 78 ~~Ag~~ 83 (236)
T 1ooe_A 78 CVAGGW 83 (236)
T ss_dssp ECCCCC
T ss_pred ECCccc
Confidence 999964
No 112
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=71.62 E-value=33 Score=26.51 Aligned_cols=61 Identities=10% Similarity=0.126 Sum_probs=43.5
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEc--CCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 117 IVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILS--PHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 117 kVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaS--AHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.|+++.-+.+|- .+.+.+.+.+++.| |++.+.. .+..++.-.++++.+..++++-+|....
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~ 68 (288)
T 1gud_A 3 EYAVVLKTLSNPFWVDMKKGIEDEAKTLG--VSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPL 68 (288)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHT--CCEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHcC--CEEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 588888665552 34566777888888 4566666 6778888778887777777888776554
No 113
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=71.45 E-value=18 Score=28.23 Aligned_cols=29 Identities=21% Similarity=0.107 Sum_probs=20.0
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.++.++++|+|..+ -+...+++.|-+-|.
T Consensus 3 ~l~~k~vlVTGas~--gIG~aia~~l~~~G~ 31 (257)
T 3imf_A 3 AMKEKVVIITGGSS--GMGKGMATRFAKEGA 31 (257)
T ss_dssp TTTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 34567888898887 456666666766664
No 114
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=71.39 E-value=23 Score=28.42 Aligned_cols=63 Identities=14% Similarity=0.085 Sum_probs=48.0
Q ss_pred CCCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|+++..+.+| ..+.+.+.+.+++.|. ++.+...+. ++...++++....++++-+|....
T Consensus 63 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~ 128 (333)
T 3jvd_A 63 RSALVGVIVPDLSNEYYSESLQTIQQDLKAAGY--QMLVAEANS-VQAQDVVMESLISIQAAGIIHVPV 128 (333)
T ss_dssp -CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECCS-HHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcch
Confidence 34579999988777 3567778888899984 677777777 888888888887778888876543
No 115
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=71.36 E-value=10 Score=28.67 Aligned_cols=41 Identities=12% Similarity=0.095 Sum_probs=33.3
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ 154 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHR 154 (188)
+.|+++|+|+..-..+..-+-...++|++-| |++.++|.+.
T Consensus 2 ~~m~kkv~ill~~g~~~~e~~~~~~~l~~ag--~~v~~~s~~~ 42 (190)
T 4e08_A 2 SHMSKSALVILAPGAEEMEFIIAADVLRRAG--IKVTVAGLNG 42 (190)
T ss_dssp --CCCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCCCcEEEEEECCCchHHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 4577789999998878777778889999877 7999999987
No 116
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=71.30 E-value=34 Score=27.19 Aligned_cols=62 Identities=11% Similarity=0.169 Sum_probs=45.8
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++-..+|- .+.+.+.+.+++.|. ++.+...+..++...++++.+..++++-+|...
T Consensus 58 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 122 (340)
T 1qpz_A 58 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMC 122 (340)
T ss_dssp CSEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeC
Confidence 34799998766552 456677778888885 666677778888888888877777888877654
No 117
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=71.27 E-value=15 Score=28.42 Aligned_cols=63 Identities=10% Similarity=0.225 Sum_probs=42.7
Q ss_pred CCCeEEEEeccCCC-----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDSD-----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~SD-----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
....|++++.+.+| ..+.+.+.+.+++.| |++.+......++...++.+...+++++-+|...
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 74 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQ--YHLVVTPHIHAKDSMVPIRYILETGSADGVIISK 74 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSS--CEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEES
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcC--CEEEEecCCcchhHHHHHHHHHHcCCccEEEEec
Confidence 34579999987664 244556667777777 4666777776676666666666667787777653
No 118
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=71.13 E-value=25 Score=27.46 Aligned_cols=28 Identities=14% Similarity=0.183 Sum_probs=19.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+..++++|+|..+ -+...+++.|-+-|.
T Consensus 30 l~~k~vlVTGasg--gIG~~la~~l~~~G~ 57 (279)
T 1xg5_A 30 WRDRLALVTGASG--GIGAAVARALVQQGL 57 (279)
T ss_dssp GTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 4567889999887 455666666666663
No 119
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=71.13 E-value=31 Score=27.66 Aligned_cols=62 Identities=11% Similarity=0.157 Sum_probs=48.3
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++.+.++- .+.+.+.+.+++.|. ++-+...+..++...++++.+.+++++-+|...
T Consensus 70 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~ 134 (355)
T 3e3m_A 70 SGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGL--QLLLGYTAYSPEREEQLVETMLRRRPEAMVLSY 134 (355)
T ss_dssp -CEEEEEESCSBCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeC
Confidence 45799999887764 456677788888885 667778888999988999888888888777654
No 120
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=70.95 E-value=19 Score=27.88 Aligned_cols=61 Identities=7% Similarity=0.086 Sum_probs=43.1
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...|++++ +.+| ..+.+.+.+.+++.|. ++.+...+..++ -.++++...+++++-+|....
T Consensus 12 ~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~ 75 (289)
T 3k9c_A 12 SRLLGVVF-ELQQPFHGDLVEQIYAAATRRGY--DVMLSAVAPSRA-EKVAVQALMRERCEAAILLGT 75 (289)
T ss_dssp -CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTC--EEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETC
T ss_pred CCEEEEEE-ecCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECC
Confidence 45799999 6665 2456677788888984 666666666666 566777777778888887654
No 121
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=70.53 E-value=22 Score=27.25 Aligned_cols=61 Identities=11% Similarity=0.196 Sum_probs=44.6
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
..|++++.. ++- .+.+.+.+.+++.|+ ++.+....-.++...++++....++++-+|....
T Consensus 9 ~~Igvi~~~-~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 72 (288)
T 2qu7_A 9 NIIAFIVPD-QNPFFTEVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPV 72 (288)
T ss_dssp EEEEEEESS-CCHHHHHHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCS
T ss_pred CEEEEEECC-CCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecC
Confidence 469999977 542 455666777788885 5666677778888888888777788988887654
No 122
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=70.35 E-value=29 Score=27.19 Aligned_cols=29 Identities=10% Similarity=0.037 Sum_probs=19.8
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+++.++++|+|..+- +...+++.|-+.|.
T Consensus 28 ~l~~k~vlITGasgg--IG~~la~~L~~~G~ 56 (272)
T 1yb1_A 28 SVTGEIVLITGAGHG--IGRLTAYEFAKLKS 56 (272)
T ss_dssp CCTTCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred ccCCCEEEEECCCch--HHHHHHHHHHHCCC
Confidence 345678999998874 56666666666663
No 123
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=70.25 E-value=34 Score=26.22 Aligned_cols=60 Identities=12% Similarity=0.336 Sum_probs=41.1
Q ss_pred eEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 117 IVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 117 kVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.|++++-..+| ..+.+.+.+.+++.|. ++-+......+++-.++++.+.+++++-+|...
T Consensus 3 ~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 65 (283)
T 2ioy_A 3 TIGLVISTLNNPFFVTLKNGAEEKAKELGY--KIIVEDSQNDSSKELSNVEDLIQQKVDVLLINP 65 (283)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 57888766655 2456666777888875 556666666777777777776677787777644
No 124
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=70.09 E-value=12 Score=25.95 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=37.1
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCC-eEEE
Q 029774 117 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 175 (188)
Q Consensus 117 kVaIIMGS~---SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~Gv-kVII 175 (188)
+|.|.+-+. +.=+.+++|...|+++||+|+..=+.. .|+...++.+......+ .|||
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~--~~~~~~~l~~~~g~~~vP~ifi 76 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKTFSNWPTYPQLYV 76 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS--CHHHHHHHHHHHSCCSSCEEEC
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC--CHHHHHHHHHHhCCCCCCEEEE
Confidence 466666543 555789999999999999987666654 46555555543333444 4443
No 125
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=70.01 E-value=15 Score=28.26 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=36.7
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEE-cCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKIL-SPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVa-SAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...|++++...+| ..+.+.+.+.+++.|. ++.+. .....++...++++....++++-+|....
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 74 (290)
T 3clk_A 8 SNVIAAVVSSVRTNFAQQILDGIQEEAHKNGY--NLIIVYSGSADPEEQKHALLTAIERPVMGILLLSI 74 (290)
T ss_dssp CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTC--EEEEEC----------CHHHHHHSSCCSEEEEESC
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecc
Confidence 4579999865444 3456677778888885 66666 66666776666777776778887776543
No 126
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=69.94 E-value=28 Score=26.45 Aligned_cols=66 Identities=5% Similarity=0.040 Sum_probs=47.7
Q ss_pred CCCeEEEEeccC-CC---HHHHHHHHHHHHHh-CCCeeEEEE-cCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESD-SD---LPVMNDAARTLSDF-GVPYEIKIL-SPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~-SD---lpimekA~~vLeef-GIpyDVrVa-SAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...+|++++-.. +| ..+.+.+.+.+++. |....+... ..+-.++...++++.+..++++-||....
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCS
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 345789888775 33 34566777788888 777666665 35678888888888887888988887654
No 127
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=69.94 E-value=14 Score=28.43 Aligned_cols=62 Identities=6% Similarity=0.052 Sum_probs=43.3
Q ss_pred CeEEEEecc-C---CC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMES-D---SD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS-~---SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
..|++++-. . +| ..+.+.+.+.+++.|. ++.+......++...++++.+..++++-+|....
T Consensus 5 ~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~ 73 (287)
T 3bbl_A 5 FMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNY--FVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSI 73 (287)
T ss_dssp CEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTC--EEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSC
T ss_pred eEEEEEecccccccCChhHHHHHHHHHHHHHHcCC--EEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeec
Confidence 468888765 3 33 4567778888888884 5666666667766667777777778888777543
No 128
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=69.93 E-value=19 Score=28.05 Aligned_cols=37 Identities=5% Similarity=-0.003 Sum_probs=24.2
Q ss_pred CCCCCeEEEEeccCC--C----HHHHHHHHHHHHHh--CCCeeEE
Q 029774 112 KNDTPIVGIIMESDS--D----LPVMNDAARTLSDF--GVPYEIK 148 (188)
Q Consensus 112 ~~~~pkVaIIMGS~S--D----lpimekA~~vLeef--GIpyDVr 148 (188)
+|||++|.||.||.. + ...++.+.+.|++- |.++++.
T Consensus 1 ~~mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~ 45 (211)
T 3p0r_A 1 SNAMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVEL 45 (211)
T ss_dssp ---CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 367779999999988 4 44566777777766 6654443
No 129
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=69.69 E-value=31 Score=26.67 Aligned_cols=28 Identities=25% Similarity=0.239 Sum_probs=17.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 5 l~~k~~lVTGas~--gIG~aia~~l~~~G~ 32 (247)
T 2jah_A 5 LQGKVALITGASS--GIGEATARALAAEGA 32 (247)
T ss_dssp TTTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 4456888888876 345555555555553
No 130
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=69.65 E-value=20 Score=24.48 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=37.9
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCC-eEEE
Q 029774 117 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 175 (188)
Q Consensus 117 kVaIIMGS~---SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~Gv-kVII 175 (188)
+|.|.+-+. +.=+.++++...|+++||+|+..=+..+ |+...++.+.....++ .|||
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~~--~~~~~~l~~~~g~~~vP~v~i 78 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED--EEVRQGLKAYSNWPTYPQLYV 78 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGGC--HHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCCC--HHHHHHHHHHHCCCCCCeEEE
Confidence 466666433 6668999999999999999876665543 6555555544333444 5554
No 131
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=69.51 E-value=2.4 Score=35.39 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=39.3
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCe--------------------------eEEEEcCCCChhHHHHHHHHHhhCCC
Q 029774 118 VGIIMESDSDLPVMNDAARTLSDFGVPY--------------------------EIKILSPHQNRKGALSYALSAKERGI 171 (188)
Q Consensus 118 VaIIMGS~SDlpimekA~~vLeefGIpy--------------------------DVrVaSAHRtP~~l~eyak~ae~~Gv 171 (188)
|.+=+.+=.=-.+++++.+.|+++|+.. +.+|-+-.=++++++++++++.++|+
T Consensus 12 ~i~~~f~W~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi 91 (496)
T 4gqr_A 12 SIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGV 91 (496)
T ss_dssp EEEEETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTC
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCC
Confidence 3333333332345678888899999841 12333333378999999999999999
Q ss_pred eEEE
Q 029774 172 KIII 175 (188)
Q Consensus 172 kVII 175 (188)
+||+
T Consensus 92 ~Vil 95 (496)
T 4gqr_A 92 RIYV 95 (496)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9997
No 132
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=69.33 E-value=18 Score=26.21 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=36.7
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCC---eeEEEEcCCCChhHHHHHHHHHhhCC-CeEEE
Q 029774 117 IVGIIMESD---SDLPVMNDAARTLSDFGVP---YEIKILSPHQNRKGALSYALSAKERG-IKIII 175 (188)
Q Consensus 117 kVaIIMGS~---SDlpimekA~~vLeefGIp---yDVrVaSAHRtP~~l~eyak~ae~~G-vkVII 175 (188)
+|.|.|-++ ..=|.+++|...|+++||+ |+..=+. ..++...++.+...... ..|||
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~--~~~~~~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVL--EDPELREGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECT--TCHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEec--CCHHHHHHHHHHhCCCCCCeEEE
Confidence 588888775 3578999999999999999 6543333 34554444443322233 36666
No 133
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=68.80 E-value=18 Score=30.19 Aligned_cols=61 Identities=21% Similarity=0.370 Sum_probs=40.8
Q ss_pred CeEEEEeccCCCH-HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSDL-PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SDl-pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
+++.||.=..|.- ...+++.+.|++.|+++++.... .++...++++++..++++++|++-|
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~---~~~~~~~~~~~~~~~~~d~vvv~GG 91 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW---EKGDAARYVEEARKFGVATVIAGGG 91 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC---STTHHHHHHHHHHHHTCSEEEEEES
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec---CcchHHHHHHHHHhcCCCEEEEEcc
Confidence 4677775433321 66788999999999988776543 2445666666655556888877655
No 134
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=68.75 E-value=41 Score=26.44 Aligned_cols=29 Identities=17% Similarity=0.028 Sum_probs=19.1
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+++.++++|+|..+ -+...+++.|-+-|.
T Consensus 12 ~l~gk~~lVTGas~--gIG~a~a~~la~~G~ 40 (280)
T 3pgx_A 12 SLQGRVAFITGAAR--GQGRSHAVRLAAEGA 40 (280)
T ss_dssp TTTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred ccCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 34567888998887 445556666666564
No 135
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=68.74 E-value=20 Score=28.49 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=25.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
++++++|+|..+ -+...+++.|-+-|. . |+-..|+++++.+..
T Consensus 23 ~~k~~lVTGas~--GIG~aia~~la~~G~--~--V~~~~r~~~~~~~~~ 65 (279)
T 3sju_A 23 RPQTAFVTGVSS--GIGLAVARTLAARGI--A--VYGCARDAKNVSAAV 65 (279)
T ss_dssp --CEEEEESTTS--HHHHHHHHHHHHTTC--E--EEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHH
Confidence 467999999988 456666777766664 2 333345555444433
No 136
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=68.69 E-value=19 Score=28.57 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=40.4
Q ss_pred CCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh------------------------HHHHHHHH
Q 029774 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALS 165 (188)
Q Consensus 110 ~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~------------------------~l~eyak~ 165 (188)
.+.+++.++++|+|..+- +...+++.|-+-|. .+.+. -|.++ .+.++++.
T Consensus 21 ~m~~l~gk~vlVTGas~g--IG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 94 (266)
T 3grp_A 21 SMFKLTGRKALVTGATGG--IGEAIARCFHAQGA--IVGLH--GTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEV 94 (266)
T ss_dssp CTTCCTTCEEEESSTTSH--HHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHH
T ss_pred chhccCCCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHH
Confidence 344556789999999984 55666677766664 22222 24444 44444443
Q ss_pred Hhh--CCCeEEEEecCcc
Q 029774 166 AKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 166 ae~--~GvkVIIAvAGmA 181 (188)
..+ .+++++|-.||..
T Consensus 95 ~~~~~g~iD~lvnnAg~~ 112 (266)
T 3grp_A 95 AEREMEGIDILVNNAGIT 112 (266)
T ss_dssp HHHHHTSCCEEEECCCCC
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 322 3689999999864
No 137
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=68.46 E-value=22 Score=27.62 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=17.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFG 142 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefG 142 (188)
++.++++|+|..+ -+...+++.|-+-|
T Consensus 3 l~~k~vlVTGas~--gIG~~ia~~l~~~G 29 (260)
T 2qq5_A 3 MNGQVCVVTGASR--GIGRGIALQLCKAG 29 (260)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCC
Confidence 3456788888776 34555566665555
No 138
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=68.45 E-value=38 Score=26.39 Aligned_cols=63 Identities=17% Similarity=0.188 Sum_probs=41.7
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEc-CCCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 116 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 116 pkVaIIMGS~SD--lpimekA~~vLeefGIpyDVrVaS-AHRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
.+|+++....++ ..+.+.+.+.++++|+ ++.+.. .+..++...++++.+..++++.+|.....
T Consensus 2 ~~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~ 67 (313)
T 2h3h_A 2 LTIGVIGKSVHPYWSQVEQGVKAAGKALGV--DTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSD 67 (313)
T ss_dssp CEEEEECSCSSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSS
T ss_pred eEEEEEeCCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 367888765554 2345566677788885 455554 36677777777777777788888876543
No 139
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=68.39 E-value=22 Score=25.90 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=37.6
Q ss_pred CeEEEEeccC---CCHHHHHHHHHHHHHhCCC-eeEEEEcCCCChhHHHHHHHHHhhCC-CeEEE
Q 029774 116 PIVGIIMESD---SDLPVMNDAARTLSDFGVP-YEIKILSPHQNRKGALSYALSAKERG-IKIII 175 (188)
Q Consensus 116 pkVaIIMGS~---SDlpimekA~~vLeefGIp-yDVrVaSAHRtP~~l~eyak~ae~~G-vkVII 175 (188)
.+|.|.|-++ ..=|.+++|.+.|+++||+ |+..=+.- .|+...++.+...... +.|||
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~--d~~~~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPELRQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC--CHHHHHHHHHHhCCCCcCeEEE
Confidence 3588888764 3578999999999999996 87665553 3544444443322222 35555
No 140
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=68.15 E-value=13 Score=26.80 Aligned_cols=51 Identities=14% Similarity=0.110 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029774 130 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 184 (188)
Q Consensus 130 imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHL 184 (188)
.++++.+.++..|++++..+..- .| ...+++.+++.++++||.++-+...+
T Consensus 88 ~l~~~~~~~~~~g~~~~~~v~~G--~~--~~~I~~~a~~~~~DLIVmG~~g~~~~ 138 (175)
T 2gm3_A 88 LLEFFVNKCHEIGVGCEAWIKTG--DP--KDVICQEVKRVRPDFLVVGSRGLGRF 138 (175)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEES--CH--HHHHHHHHHHHCCSEEEEEECCCC--
T ss_pred HHHHHHHHHHHCCCceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCChh
Confidence 34455556667888888777642 23 44555666666788888876544433
No 141
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=68.09 E-value=43 Score=26.49 Aligned_cols=64 Identities=9% Similarity=0.114 Sum_probs=46.7
Q ss_pred CCCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 114 DTPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 114 ~~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
....|++++...++- .+.+.+.+.+++.|. ++.+...+-.++...++++....++++-+|....
T Consensus 62 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 128 (332)
T 2o20_A 62 RTTTVGVILPTITSTYFAAITRGVDDIASMYKY--NMILANSDNDVEKEEKVLETFLSKQVDGIVYMGS 128 (332)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSS
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCC
Confidence 345799999765552 456677778888885 5666777778888888888777788988877653
No 142
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=67.75 E-value=10 Score=30.03 Aligned_cols=31 Identities=19% Similarity=0.212 Sum_probs=23.6
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.+.||+||+|..|..-+.+.+++.|-+-|.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga 33 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA 33 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC
Confidence 3457899999977766677777777777775
No 143
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=67.64 E-value=13 Score=25.07 Aligned_cols=45 Identities=11% Similarity=0.013 Sum_probs=30.8
Q ss_pred eEEEEeccCCCHHHH------HHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHH
Q 029774 117 IVGIIMESDSDLPVM------NDAARTLSDFGVPYEIKILSPHQNRKGALSYALS 165 (188)
Q Consensus 117 kVaIIMGS~SDlpim------ekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ 165 (188)
+|.|.+- +-=+.+ ++|...|++.||+|+..=+..+ |+...++.+.
T Consensus 3 ~v~ly~~--~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~--~~~~~~l~~~ 53 (93)
T 1t1v_A 3 GLRVYST--SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD--NALRDEMRTL 53 (93)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC--HHHHHHHHHH
T ss_pred CEEEEEc--CCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHH
Confidence 5666653 334566 8999999999999987766644 5555555543
No 144
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=67.45 E-value=39 Score=26.73 Aligned_cols=61 Identities=10% Similarity=0.181 Sum_probs=45.7
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++...++- .+.+.+.+.+++.|. ++.+...+-.++...++++....++++-+| ..
T Consensus 60 ~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI-~~ 123 (330)
T 3ctp_A 60 SKTIGLMVPNISNPFFNQMASVIEEYAKNKGY--TLFLCNTDDDKEKEKTYLEVLQSHRVAGII-AS 123 (330)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEE-EE
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEE-EC
Confidence 35799999766552 456677778888885 566677777888888888887778899888 54
No 145
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=67.19 E-value=23 Score=28.45 Aligned_cols=68 Identities=7% Similarity=0.065 Sum_probs=42.1
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCChhHHHHHHHHHhh
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS------------------------PHQNRKGALSYALSAKE 168 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS------------------------AHRtP~~l~eyak~ae~ 168 (188)
.++.++++|+|..+..-+...+++.|-+-|.. +-++. =-..++.+.++++...+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 34568999999987745566666677666643 22221 12334555555654433
Q ss_pred --CCCeEEEEecCccC
Q 029774 169 --RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 --~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 106 ~~g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 106 KWGKLDFLVHAIGFSD 121 (293)
T ss_dssp HTSCCSEEEECCCCCC
T ss_pred hcCCCCEEEECCccCC
Confidence 35899999998753
No 146
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=66.88 E-value=39 Score=26.21 Aligned_cols=63 Identities=14% Similarity=0.277 Sum_probs=39.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHH------------------------HHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGAL------------------------SYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~------------------------eyak~ae~- 168 (188)
.+.++++|+|..+ -+...+++.|-+-|.. |+-..|.++.+. +++++..+
T Consensus 7 l~gk~~lVTGas~--gIG~a~a~~l~~~G~~----V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 7 LEGKVALVTGASR--GIGKAIAELLAERGAK----VIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp CTTCEEEESSCSS--HHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCCE----EEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHH
Confidence 4468999999988 4566777777777752 333345554443 33333322
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 81 ~g~iD~lv~nAg~~~ 95 (248)
T 3op4_A 81 FGGVDILVNNAGITR 95 (248)
T ss_dssp HCCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 26899999998653
No 147
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=66.86 E-value=22 Score=26.30 Aligned_cols=60 Identities=15% Similarity=-0.040 Sum_probs=46.7
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCee---------------EEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 119 GIIMESDSDLPVMNDAARTLSDFGVPYE---------------IKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 119 aIIMGS~SDlpimekA~~vLeefGIpyD---------------VrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.++.|.-+-...++.....|..+|.+.. +-++|..+...++.+.++.++++|++++ ++.+
T Consensus 40 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~ 114 (186)
T 1m3s_A 40 IFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVA-ALTI 114 (186)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEE-EEES
T ss_pred EEEEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEE-EEEC
Confidence 3455666668899999999999998632 5678888888899999999999998764 4444
No 148
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=66.76 E-value=1.9 Score=36.68 Aligned_cols=64 Identities=14% Similarity=0.004 Sum_probs=45.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---CCCChhHHHHHHHHHhhCCC---eEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---PHQNRKGALSYALSAKERGI---KIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---AHRtP~~l~eyak~ae~~Gv---kVIIAvAGmA 181 (188)
.+|.||++........++..+.|++.+ +++.+.. +|.+.+.+.+..+.+.+.++ +++||+-|++
T Consensus 27 ~~~livtd~~v~~~~~~~v~~~L~~~~--~~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGs 96 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALE--VRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGV 96 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSC--EEEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhCC--cEEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECChH
Confidence 369999876543334566666665443 4445543 57788999999988888889 9999998875
No 149
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=66.67 E-value=5.9 Score=31.32 Aligned_cols=62 Identities=10% Similarity=-0.001 Sum_probs=40.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCc
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAH 183 (188)
|..++.++.....-.+ .+.+++++++. ++.|.- -..++..+.++.. ++|++|||+--|.++.
T Consensus 3 ~~~~I~~iapy~~l~~---~~~~i~~e~~~--~i~i~~--~~l~~~v~~a~~~-~~~~dVIISRGgta~~ 64 (196)
T 2q5c_A 3 LSLKIALISQNENLLN---LFPKLALEKNF--IPITKT--ASLTRASKIAFGL-QDEVDAIISRGATSDY 64 (196)
T ss_dssp CCCEEEEEESCHHHHH---HHHHHHHHHTC--EEEEEE--CCHHHHHHHHHHH-TTTCSEEEEEHHHHHH
T ss_pred CCCcEEEEEccHHHHH---HHHHHHhhhCC--ceEEEE--CCHHHHHHHHHHh-cCCCeEEEECChHHHH
Confidence 4457777776544344 44555666766 444432 3367788888777 7899999997766543
No 150
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.56 E-value=31 Score=26.99 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=18.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+- +...+++.|-+-|.
T Consensus 9 l~~k~vlVTGas~g--IG~aia~~l~~~G~ 36 (264)
T 3ucx_A 9 LTDKVVVISGVGPA--LGTTLARRCAEQGA 36 (264)
T ss_dssp TTTCEEEEESCCTT--HHHHHHHHHHHTTC
T ss_pred cCCcEEEEECCCcH--HHHHHHHHHHHCcC
Confidence 34578888888875 44555556655553
No 151
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=66.50 E-value=32 Score=26.76 Aligned_cols=28 Identities=14% Similarity=0.077 Sum_probs=18.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 5 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (262)
T 1zem_A 5 FNGKVCLVTGAGG--NIGLATALRLAEEGT 32 (262)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 3456888888877 455666666666663
No 152
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=66.37 E-value=20 Score=32.59 Aligned_cols=58 Identities=17% Similarity=0.170 Sum_probs=46.7
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEE--EcCCC-ChhHHHHHHHHHhhCCCeEE
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKI--LSPHQ-NRKGALSYALSAKERGIKII 174 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrV--aSAHR-tP~~l~eyak~ae~~GvkVI 174 (188)
.+.-|..+.||..-++++.+.+++.|...+..+ ....| +|+.+.++++.+.+-|++.|
T Consensus 115 d~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I 175 (464)
T 2nx9_A 115 DVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSI 175 (464)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred CEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEE
Confidence 345566899999999999999999999876666 22333 78999999999999898754
No 153
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=66.35 E-value=42 Score=26.67 Aligned_cols=28 Identities=21% Similarity=0.214 Sum_probs=19.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+.++++|+|+.+ -+...+++.|-+-|.
T Consensus 27 ~~~k~~lVTGas~--GIG~aia~~la~~G~ 54 (280)
T 4da9_A 27 KARPVAIVTGGRR--GIGLGIARALAASGF 54 (280)
T ss_dssp CCCCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEecCCC--HHHHHHHHHHHHCCC
Confidence 3457899999887 455666666666664
No 154
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=66.28 E-value=23 Score=27.78 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=24.7
Q ss_pred CeEEEEeccCCC----HHHHHHHHHHHHHh-CCCeeEEEEcCC
Q 029774 116 PIVGIIMESDSD----LPVMNDAARTLSDF-GVPYEIKILSPH 153 (188)
Q Consensus 116 pkVaIIMGS~SD----lpimekA~~vLeef-GIpyDVrVaSAH 153 (188)
.+|.||.||... ...++.+.+.|++- |++ +.++...
T Consensus 2 mkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~--v~~~dl~ 42 (242)
T 1sqs_A 2 NKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVD--ISFRTPF 42 (242)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCE--EEEECTT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCe--EEEEEcc
Confidence 389999999753 55667777777776 764 4555543
No 155
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=66.14 E-value=46 Score=26.16 Aligned_cols=64 Identities=11% Similarity=0.061 Sum_probs=40.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------------------------CCChhHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------------------------HQNRKGALS 161 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA--------------------------------HRtP~~l~e 161 (188)
++.++++|+|+.+ -+...+++.|-+-|. .+-+++- -..++.+.+
T Consensus 4 l~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 4 LSGKTLFITGASR--GIGLAIALRAARDGA--NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHH
T ss_pred CCCcEEEEECCCC--hHHHHHHHHHHHCCC--EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 4467999999987 566677777777774 3333321 123445555
Q ss_pred HHHHHhh--CCCeEEEEecCcc
Q 029774 162 YALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 162 yak~ae~--~GvkVIIAvAGmA 181 (188)
++++..+ .+++++|-.||..
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcc
Confidence 6654433 3689999999975
No 156
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=66.02 E-value=37 Score=26.37 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=27.3
Q ss_pred CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 111 GKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 111 ~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
+.++..++++|+|..+. +...+++.|-+-|. .+. -.-|+++++.+..
T Consensus 24 m~~l~~k~vlITGas~g--IG~~la~~l~~~G~--~V~--~~~r~~~~~~~~~ 70 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRG--IGAAIARKLGSLGA--RVV--LTARDVEKLRAVE 70 (262)
T ss_dssp -CTTTTCEEEESSTTSH--HHHHHHHHHHHTTC--EEE--EEESCHHHHHHHH
T ss_pred hhccCCCEEEEECCCCh--HHHHHHHHHHHCCC--EEE--EEECCHHHHHHHH
Confidence 33455678999998874 55666666666664 232 2335555544433
No 157
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=65.93 E-value=42 Score=25.79 Aligned_cols=62 Identities=6% Similarity=-0.034 Sum_probs=44.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEE-EcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKI-LSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrV-aSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|+++.-+.+|- .+.+.+.+.++++|+ ++.+ ...+..++...++++.+.+++++-+|....
T Consensus 5 ~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~ 70 (305)
T 3g1w_A 5 ETYMMITFQSGMDYWKRCLKGFEDAAQALNV--TVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAI 70 (305)
T ss_dssp CEEEEEESSTTSTHHHHHHHHHHHHHHHHTC--EEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCS
T ss_pred ceEEEEEccCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 4677777665552 345677778888885 5555 467888888888888877778888877543
No 158
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=65.74 E-value=35 Score=27.20 Aligned_cols=65 Identities=9% Similarity=0.013 Sum_probs=46.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--cCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL--SPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVa--SAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|++|.|..... -.+--.+.|++.|.+ ++.+. +..-.|+.-.+.++..-++++++|++.++..|
T Consensus 127 ~~Ig~i~g~~~~~-r~~Gf~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~D~~a 193 (296)
T 2hqb_A 127 HKVGVIAAFPWQP-EVEGFVDGAKYMNES-EAFVRYVGEWTDADKALELFQELQKEQVDVFYPAGDGYH 193 (296)
T ss_dssp SEEEEEESCTTCH-HHHHHHHHHHHTTCC-EEEEEECSSSSCHHHHHHHHHHHHTTTCCEEECCCTTTH
T ss_pred CeEEEEcCcCchh-hHHHHHHHHHHhCCC-eEEEEeeccccCHHHHHHHHHHHHHCCCcEEEECCCCCC
Confidence 5899999976554 555667888899987 66543 23346777767666655568999999988743
No 159
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=65.39 E-value=24 Score=28.71 Aligned_cols=59 Identities=24% Similarity=0.084 Sum_probs=36.1
Q ss_pred CCCeEEEEeccCC----C----HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 114 DTPIVGIIMESDS----D----LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~S----D----lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.|++|.||.||.. + ...++.+.+.|++-|.++++.-+. .. .++.+..+..+. +++||-+
T Consensus 24 ~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~--~~-~Dv~~~~~~l~~--aD~iv~~ 90 (218)
T 3rpe_A 24 AMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD--QG-YDIESEIENYLW--ADTIIYQ 90 (218)
T ss_dssp CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG--GC-CCHHHHHHHHHH--CSEEEEE
T ss_pred cCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC--Cc-cCHHHHHHHHHh--CCEEEEE
Confidence 3458999999983 2 456788888888878765544443 32 234444544444 4555443
No 160
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=65.36 E-value=35 Score=29.38 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=47.9
Q ss_pred CCCeEEEEeccCC------CHHHHHHHHHHHHHhCCCeeEEEE-cCCCC--------hhHHHHHHHHHhhCCCeEEEEec
Q 029774 114 DTPIVGIIMESDS------DLPVMNDAARTLSDFGVPYEIKIL-SPHQN--------RKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 114 ~~pkVaIIMGS~S------DlpimekA~~vLeefGIpyDVrVa-SAHRt--------P~~l~eyak~ae~~GvkVIIAvA 178 (188)
|.-+|+||.=|.. +.+-.+.+.+.|+++|... .+. .+.+. -+++.++.+...+..++.|+++-
T Consensus 4 ~~D~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v--~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 81 (346)
T 4eys_A 4 MVSTIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNP--IFLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAI 81 (346)
T ss_dssp CCCEEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEE--EECTTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECC
T ss_pred cCcEEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEE--EECCchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 4457999975543 3567899999999999844 332 23332 35677777777777899999999
Q ss_pred CccCc
Q 029774 179 GVEAH 183 (188)
Q Consensus 179 GmAAH 183 (188)
|+-+.
T Consensus 82 GG~g~ 86 (346)
T 4eys_A 82 GGDDT 86 (346)
T ss_dssp CCSCG
T ss_pred cccCH
Confidence 98543
No 161
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=65.32 E-value=36 Score=26.85 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=39.8
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHh-CCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDF-GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeef-GIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..|++++.. +|- .+.+.+.+.+++. |+ ++.+...+..++...++++.+..++++-+|...
T Consensus 7 ~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~--~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 70 (325)
T 2x7x_A 7 FRIGVAQCS-DDSWRHKMNDEILREAMFYNGV--SVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISA 70 (325)
T ss_dssp CEEEEEESC-CSHHHHHHHHHHHHHHTTSSSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred eEEEEEecC-CCHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 468888876 442 2445555666666 54 566667777787777777777677788777654
No 162
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=65.28 E-value=40 Score=27.10 Aligned_cols=43 Identities=7% Similarity=0.023 Sum_probs=26.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 162 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ey 162 (188)
...++++|+|..+ -+....++.|-+-|. .+ +-.-|.++.+.+.
T Consensus 29 l~gk~vlVTGas~--gIG~~la~~l~~~G~--~V--~~~~r~~~~~~~~ 71 (301)
T 3tjr_A 29 FDGRAAVVTGGAS--GIGLATATEFARRGA--RL--VLSDVDQPALEQA 71 (301)
T ss_dssp STTCEEEEETTTS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHH
T ss_pred cCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EE--EEEECCHHHHHHH
Confidence 4567999999987 455666777766663 23 2233555544443
No 163
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=65.03 E-value=21 Score=27.74 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=44.6
Q ss_pred CCeEEEEec-----cCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIME-----SDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMG-----S~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++. ..+| ..+.+.+.+.+++.|. .+-+...+..++.-.++++...+++++-+|...
T Consensus 7 s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~ 76 (295)
T 3hcw_A 7 TYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGY--GTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLY 76 (295)
T ss_dssp SCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTC--EEEECCCCSHHHHHHHHHHHHHTTCCSEEEESC
T ss_pred CcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCC--EEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcC
Confidence 357999983 2333 4567778888888875 666777777777777788887778888877654
No 164
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=65.02 E-value=9 Score=30.40 Aligned_cols=55 Identities=18% Similarity=0.166 Sum_probs=33.8
Q ss_pred CeEEEEeccCCCHHH-----HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDLPV-----MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDlpi-----mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|++|+.|+..- .+.+.+.|++.| |++..+.....+..+.+. ..+++++.+.
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g--~~v~~i~~~~~~~~~~~~------~~~D~v~~~~ 63 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNK--YEIVPITLNEKMDLIEKA------KDIDFALLAL 63 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTT--EEEEEEECSSGGGHHHHT------TTCSEEEECC
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCC--CEEEEEcccCchhHHHhc------cCCCEEEEeC
Confidence 379999999886433 444555555556 677777776544443221 3467666654
No 165
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=64.98 E-value=29 Score=27.68 Aligned_cols=26 Identities=23% Similarity=0.189 Sum_probs=15.1
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 4 ~k~~lVTGas~--GIG~aia~~la~~G~ 29 (264)
T 3tfo_A 4 DKVILITGASG--GIGEGIARELGVAGA 29 (264)
T ss_dssp TCEEEESSTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCcc--HHHHHHHHHHHHCCC
Confidence 46777777776 344555555555553
No 166
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=64.48 E-value=28 Score=25.28 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCCC-eeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 128 LPVMNDAARTLSDFGVP-YEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 128 lpimekA~~vLeefGIp-yDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
...++++.+.+++.|++ ++..+..- .| ..++++.+++.+++.||.++-...
T Consensus 80 ~~~l~~~~~~~~~~gv~~v~~~v~~G--~~--~~~I~~~a~~~~~DLIV~G~~g~~ 131 (163)
T 1tq8_A 80 YEILHDAKERAHNAGAKNVEERPIVG--AP--VDALVNLADEEKADLLVVGNVGLS 131 (163)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEECS--SH--HHHHHHHHHHTTCSEEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEecC--CH--HHHHHHHHHhcCCCEEEECCCCCC
Confidence 35567777788888998 87777642 33 455666666778888888765433
No 167
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=64.34 E-value=41 Score=26.31 Aligned_cols=44 Identities=5% Similarity=0.007 Sum_probs=26.2
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHH
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 162 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ey 162 (188)
++.+++++|+|..+ -+...+++.|-+-|. .+ +-..|+++++.+.
T Consensus 7 ~l~~k~vlVTGas~--gIG~aia~~l~~~G~--~V--~~~~r~~~~~~~~ 50 (262)
T 3pk0_A 7 DLQGRSVVVTGGTK--GIGRGIATVFARAGA--NV--AVAGRSTADIDAC 50 (262)
T ss_dssp CCTTCEEEETTCSS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHH
T ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCC--EE--EEEeCCHHHHHHH
Confidence 34567899999887 455666666766664 22 2233555444443
No 168
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=64.26 E-value=23 Score=26.50 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=38.5
Q ss_pred eEEEEeccC---CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCC-eEEE
Q 029774 117 IVGIIMESD---SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGI-KIII 175 (188)
Q Consensus 117 kVaIIMGS~---SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~Gv-kVII 175 (188)
+|.|.+-|. ..=|.+++|...|+++||+|+..=+.. .|+...++.+......+ .|||
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~--d~~~~~~L~~~~G~~tvP~VfI 96 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ--NPDIRAELPKYANWPTFPQLWV 96 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG--CHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC--CHHHHHHHHHHHCCCCcCEEEE
Confidence 577777653 345789999999999999997776654 46655555543333344 6665
No 169
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=64.17 E-value=26 Score=30.03 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=47.8
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEcCCC----------ChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 117 IVGIIMESDS----DLPVMNDAARTLSDFGVPYEIKILSPHQ----------NRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 117 kVaIIMGS~S----DlpimekA~~vLeefGIpyDVrVaSAHR----------tP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
+|+||.=|.. |.+..+.+.+.|+++|....+ +.|- .-+++.++.+...+..++.|+++-|+-+
T Consensus 15 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~---~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 91 (336)
T 3sr3_A 15 TIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE---GSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMN 91 (336)
T ss_dssp EEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE---CTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE---cccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 6999986653 567899999999999985433 3331 1357777887777778999999999854
Q ss_pred c
Q 029774 183 H 183 (188)
Q Consensus 183 H 183 (188)
.
T Consensus 92 ~ 92 (336)
T 3sr3_A 92 S 92 (336)
T ss_dssp G
T ss_pred H
Confidence 3
No 170
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=64.15 E-value=48 Score=26.94 Aligned_cols=35 Identities=17% Similarity=0.077 Sum_probs=24.7
Q ss_pred CeEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEE
Q 029774 116 PIVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKIL 150 (188)
Q Consensus 116 pkVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVa 150 (188)
++|.||.||... ...++.+.+.|++-|.++++.-+
T Consensus 3 mkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~dL 41 (273)
T 1d4a_A 3 RRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDL 41 (273)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 389999999874 45677777788887765444433
No 171
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=64.08 E-value=51 Score=26.74 Aligned_cols=30 Identities=17% Similarity=0.052 Sum_probs=19.9
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
..+.+++++|+|+.+- +...++..|-+-|.
T Consensus 42 ~~l~gk~~lVTGas~G--IG~aia~~la~~G~ 71 (317)
T 3oec_A 42 NRLQGKVAFITGAARG--QGRTHAVRLAQDGA 71 (317)
T ss_dssp CTTTTCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred hccCCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 3445678888888874 45566666666664
No 172
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=64.04 E-value=27 Score=22.69 Aligned_cols=56 Identities=13% Similarity=-0.022 Sum_probs=37.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeE
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKI 173 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkV 173 (188)
|+++|.+...+ .=+.++++...|++.|++|+..=+. ..|+...++.+.....++-+
T Consensus 4 ~m~~v~ly~~~--~C~~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~~~~~vP~ 59 (92)
T 2khp_A 4 SMVDVIIYTRP--GCPYCARAKALLARKGAEFNEIDAS--ATPELRAEMQERSGRNTFPQ 59 (92)
T ss_dssp CCCCEEEEECT--TCHHHHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHHHHTSSCCCE
T ss_pred CcccEEEEECC--CChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHhCCCCcCE
Confidence 34456666543 3489999999999999998765554 45666666665444444433
No 173
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=63.95 E-value=34 Score=27.31 Aligned_cols=27 Identities=26% Similarity=0.273 Sum_probs=19.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++++++|+|..+. +...+++.|-+-|.
T Consensus 27 ~~k~~lVTGas~G--IG~aia~~la~~G~ 53 (283)
T 3v8b_A 27 PSPVALITGAGSG--IGRATALALAADGV 53 (283)
T ss_dssp CCCEEEEESCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 3579999999884 55666666666664
No 174
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=63.90 E-value=38 Score=26.69 Aligned_cols=28 Identities=18% Similarity=0.074 Sum_probs=19.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 25 l~~k~~lVTGas~--GIG~aia~~l~~~G~ 52 (277)
T 4fc7_A 25 LRDKVAFITGGGS--GIGFRIAEIFMRHGC 52 (277)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHTTTC
T ss_pred cCCCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 4567999999987 455666666666664
No 175
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=63.89 E-value=32 Score=23.46 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029774 130 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 130 imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLP 185 (188)
.++++.+.+++.|++++..+..-+ | ...+++.++ +++.+|.++-..+.+.
T Consensus 67 ~l~~~~~~~~~~g~~~~~~v~~g~--~--~~~I~~~a~--~~dliV~G~~~~~~~~ 116 (138)
T 3idf_A 67 LTQKFSTFFTEKGINPFVVIKEGE--P--VEMVLEEAK--DYNLLIIGSSENSFLN 116 (138)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEESC--H--HHHHHHHHT--TCSEEEEECCTTSTTS
T ss_pred HHHHHHHHHHHCCCCeEEEEecCC--h--HHHHHHHHh--cCCEEEEeCCCcchHH
Confidence 345566667778999888876542 2 344455554 7899888876544443
No 176
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=63.88 E-value=22 Score=28.24 Aligned_cols=60 Identities=18% Similarity=0.148 Sum_probs=48.0
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCC----eeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVP----YEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIp----yDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.|++ ..+.|-+|-=.|--..++++ ..+++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 79 (154)
T 1rvv_A 13 LKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAE---TKKYDAIITLG 79 (154)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999998 7789999999999997 35567778877877766664 45689998853
No 177
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=63.76 E-value=35 Score=27.06 Aligned_cols=44 Identities=14% Similarity=0.051 Sum_probs=26.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
++.++++|+|..+- +...+++.|-+-|. . |+-.-|.++.+.+..
T Consensus 24 l~gk~~lVTGas~g--IG~aia~~la~~G~--~--V~~~~r~~~~~~~~~ 67 (271)
T 4ibo_A 24 LGGRTALVTGSSRG--LGRAMAEGLAVAGA--R--ILINGTDPSRVAQTV 67 (271)
T ss_dssp CTTCEEEETTCSSH--HHHHHHHHHHHTTC--E--EEECCSCHHHHHHHH
T ss_pred CCCCEEEEeCCCcH--HHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHH
Confidence 44679999998874 45666666666664 2 333335555444433
No 178
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=63.70 E-value=37 Score=24.89 Aligned_cols=60 Identities=18% Similarity=0.047 Sum_probs=47.4
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe---------------eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 119 GIIMESDSDLPVMNDAARTLSDFGVPY---------------EIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 119 aIIMGS~SDlpimekA~~vLeefGIpy---------------DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.++.|.-+-...++.....|..+|.+. -+-++|..+...++.+.++.++++|++++ ++.+
T Consensus 43 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~ 117 (180)
T 1jeo_A 43 IFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNII-AIVC 117 (180)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEE-EEES
T ss_pred EEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEE-EEeC
Confidence 456677777889999999999999863 25678888888899999999999998765 4443
No 179
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=63.65 E-value=34 Score=23.68 Aligned_cols=57 Identities=21% Similarity=0.241 Sum_probs=37.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH-hhCCC-eEEE
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGI-KIII 175 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a-e~~Gv-kVII 175 (188)
...|.|... +.=|.+++|...|+++||+|+..=+.. .|+...++.+.. ....+ .|||
T Consensus 15 ~~~v~vy~~--~~Cp~C~~ak~~L~~~~i~y~~idI~~--~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 15 SAKIEIYTW--STCPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCCEEEEEC--TTCHHHHHHHHHHHHHTCCCEEEECTT--CHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CCCEEEEEc--CCChhHHHHHHHHHHCCCCCEEEEcCC--CHHHHHHHHHHhCCCCCCCEEEE
Confidence 335666654 445999999999999999998766654 355555555433 23333 4444
No 180
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=63.64 E-value=47 Score=25.33 Aligned_cols=27 Identities=26% Similarity=0.279 Sum_probs=18.4
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 8 ~~k~vlITGas~--giG~~~a~~l~~~G~ 34 (253)
T 3qiv_A 8 ENKVGIVTGSGG--GIGQAYAEALAREGA 34 (253)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 457888888877 455666666666664
No 181
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=63.60 E-value=52 Score=25.91 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=26.7
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHH
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS 161 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~e 161 (188)
.++.++++|+|..+ -+...+++.|-+-|. ++.+ .-|+++.+.+
T Consensus 19 ~l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~ 61 (277)
T 2rhc_B 19 TQDSEVALVTGATS--GIGLEIARRLGKEGL--RVFV--CARGEEGLRT 61 (277)
T ss_dssp CTTSCEEEEETCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred cCCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 34567999999987 456667777766664 3333 3355554443
No 182
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=63.51 E-value=27 Score=26.90 Aligned_cols=67 Identities=15% Similarity=0.140 Sum_probs=39.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------------------CChhHHHHHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------------------QNRKGALSYALSA 166 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH---------------------------RtP~~l~eyak~a 166 (188)
.+.++++|+|..|+--+...+++.|-+.|. .+-++..+ ..++.+.+++++.
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA--AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSC--EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 345788888888544456666666666664 33333222 2344455555444
Q ss_pred hh--CCCeEEEEecCccC
Q 029774 167 KE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 167 e~--~GvkVIIAvAGmAA 182 (188)
.+ ..++++|-.||...
T Consensus 96 ~~~~g~id~li~nAg~~~ 113 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATA 113 (267)
T ss_dssp HHHTSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 32 35799999998653
No 183
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=63.15 E-value=32 Score=27.94 Aligned_cols=67 Identities=10% Similarity=0.127 Sum_probs=46.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC---------------CCChhHHHHHHHHHhh--CCCeEEEE
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP---------------HQNRKGALSYALSAKE--RGIKIIIV 176 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA---------------HRtP~~l~eyak~ae~--~GvkVIIA 176 (188)
.+.||++|+|+.| -+.+.++..|-+-|.. |-+.+- -..++.+.++++...+ .+++++|-
T Consensus 9 L~GK~alVTGas~--GIG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn 84 (261)
T 4h15_A 9 LRGKRALITAGTK--GAGAATVSLFLELGAQ--VLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVH 84 (261)
T ss_dssp CTTCEEEESCCSS--HHHHHHHHHHHHTTCE--EEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred CCCCEEEEeccCc--HHHHHHHHHHHHcCCE--EEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999999 5677888899888864 222221 1345667777766543 35899999
Q ss_pred ecCccCcC
Q 029774 177 GDGVEAHL 184 (188)
Q Consensus 177 vAGmAAHL 184 (188)
-||.....
T Consensus 85 nAG~~~~~ 92 (261)
T 4h15_A 85 MLGGSSAA 92 (261)
T ss_dssp CCCCCCCC
T ss_pred CCCCCccC
Confidence 99975443
No 184
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=62.73 E-value=15 Score=29.13 Aligned_cols=60 Identities=7% Similarity=-0.027 Sum_probs=47.4
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpy----DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. ...+.|.+.|++.|++. .+.|-+|-=.|--..++++ ..+++.+||..
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 78 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAE---TGRYGAVLGTA 78 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---HTCCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999998 77899999999999974 4456677777777666664 45689998853
No 185
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=62.32 E-value=53 Score=25.55 Aligned_cols=29 Identities=21% Similarity=0.023 Sum_probs=19.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+..++++|+|..+ -+...+++.|-+-|.
T Consensus 10 ~l~gk~vlVTGas~--gIG~~ia~~l~~~G~ 38 (278)
T 3sx2_A 10 PLTGKVAFITGAAR--GQGRAHAVRLAADGA 38 (278)
T ss_dssp TTTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 34567899999887 445566666666664
No 186
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=62.18 E-value=36 Score=27.43 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=44.2
Q ss_pred CCeEEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|+++....+|- .+.+.+.+.+++.|. ++.+...+..++...++++....++++-+|...
T Consensus 66 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 130 (348)
T 3bil_A 66 SNTIGVIVPSLINHYFAAMVTEIQSTASKAGL--ATIITNSNEDATTMSGSLEFLTSHGVDGIICVP 130 (348)
T ss_dssp --CEEEEESCSSSHHHHHHHHHHHHHHHHTTC--CEEEEECTTCHHHHHHHHHHHHHTTCSCEEECC
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeC
Confidence 34699998766552 456777788888886 455666677788877888877777888777654
No 187
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=62.17 E-value=53 Score=25.45 Aligned_cols=30 Identities=13% Similarity=0.030 Sum_probs=21.8
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
..+++++++|+|+.+ -+...+++.|-+-|.
T Consensus 6 ~~l~gk~vlVTGas~--gIG~~ia~~l~~~G~ 35 (287)
T 3pxx_A 6 GRVQDKVVLVTGGAR--GQGRSHAVKLAEEGA 35 (287)
T ss_dssp CTTTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cccCCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 345568999999988 456677777777774
No 188
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=62.15 E-value=48 Score=25.64 Aligned_cols=28 Identities=7% Similarity=0.115 Sum_probs=18.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 7 l~~k~vlVTGas~--giG~~ia~~l~~~G~ 34 (260)
T 2ae2_A 7 LEGCTALVTGGSR--GIGYGIVEELASLGA 34 (260)
T ss_dssp CTTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 3457888888877 445566666666663
No 189
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=62.01 E-value=38 Score=26.36 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=25.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
+.++++|+|..+- +...+++.|-+-|. .+ +-.-|+++.+.+..
T Consensus 6 ~~k~~lVTGas~G--IG~aia~~l~~~G~--~V--~~~~r~~~~~~~~~ 48 (250)
T 3nyw_A 6 QKGLAIITGASQG--IGAVIAAGLATDGY--RV--VLIARSKQNLEKVH 48 (250)
T ss_dssp CCCEEEEESTTSH--HHHHHHHHHHHHTC--EE--EEEESCHHHHHHHH
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCC--EE--EEEECCHHHHHHHH
Confidence 4578999998874 45666666666664 33 32345555544433
No 190
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=61.97 E-value=32 Score=27.00 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=37.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC------------------------CCChhHHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP------------------------HQNRKGALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA------------------------HRtP~~l~eyak~ae~- 168 (188)
++.++++|+|..|.--+...+++.|-+-|. +|.+++- -..++.+.++++...+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 345678888877333456666666666663 3333321 1223444455544322
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 82 ~g~id~lv~nAg~~~ 96 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAP 96 (275)
T ss_dssp TSCEEEEEECCCCCC
T ss_pred cCCCCEEEECCccCc
Confidence 25799999999753
No 191
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=61.95 E-value=32 Score=27.70 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=49.1
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChhHHHHHHHHHh--hCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAK--ERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpy----DVrVaSAHRtP~~l~eyak~ae--~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. ...+.|.+.|++.|++- .+.|-+|-=.|--..++++..+ ..+++.+||..
T Consensus 17 ~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaLG 88 (168)
T 1ejb_A 17 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIG 88 (168)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEec
Confidence 5799999999998 78899999999999862 3457778888877777775332 45689998853
No 192
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=61.79 E-value=49 Score=25.80 Aligned_cols=64 Identities=19% Similarity=0.248 Sum_probs=39.3
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHH------------------------HHHHhh
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY------------------------ALSAKE 168 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ey------------------------ak~ae~ 168 (188)
+.++++++|+|..+- +...+++.|-+-|. . |+-..|+++.+.+. ++...+
T Consensus 5 ~l~gk~~lVTGas~g--IG~a~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 5 NYQGKKAIVIGGTHG--MGLATVRRLVEGGA--E--VLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TTTTCEEEEETCSSH--HHHHHHHHHHHTTC--E--EEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH--HHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHH
Confidence 345679999999884 56667777777774 2 33334555544443 332221
Q ss_pred --CCCeEEEEecCccC
Q 029774 169 --RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 --~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 79 ~~g~id~lv~nAg~~~ 94 (255)
T 4eso_A 79 TLGAIDLLHINAGVSE 94 (255)
T ss_dssp HHSSEEEEEECCCCCC
T ss_pred HhCCCCEEEECCCCCC
Confidence 25788998888753
No 193
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=61.75 E-value=37 Score=27.08 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=40.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh-hCCCeEEEEe
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVG 177 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae-~~GvkVIIAv 177 (188)
+++.++++|+|..+ -+...+++.|-+-|. .+-++ .+|+++.+.+..++.+ ..|.++.+..
T Consensus 6 ~l~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~ 66 (291)
T 1e7w_A 6 APTVPVALVTGAAK--RLGRSIAEGLHAEGY--AVCLH-YHRSAAEANALSATLNARRPNSAITVQ 66 (291)
T ss_dssp --CCCEEEETTCSS--HHHHHHHHHHHHTTC--EEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCCCCEEEEECCCc--hHHHHHHHHHHHCCC--eEEEE-cCCCHHHHHHHHHHHhhhcCCeeEEEE
Confidence 45568999999998 567788888888885 33332 3499999888887664 3444554433
No 194
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=61.64 E-value=40 Score=26.92 Aligned_cols=44 Identities=16% Similarity=0.158 Sum_probs=27.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
...++++|+|..+ -+...+++.|-+-|. +|+-.-|+++.+.+..
T Consensus 6 l~gk~vlVTGas~--GIG~aia~~la~~G~----~V~~~~r~~~~~~~~~ 49 (280)
T 3tox_A 6 LEGKIAIVTGASS--GIGRAAALLFAREGA----KVVVTARNGNALAELT 49 (280)
T ss_dssp TTTCEEEESSTTS--HHHHHHHHHHHHTTC----EEEECCSCHHHHHHHH
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC----EEEEEECCHHHHHHHH
Confidence 3457999999987 456667777777774 2444455555544433
No 195
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=61.35 E-value=41 Score=25.53 Aligned_cols=28 Identities=14% Similarity=0.293 Sum_probs=17.1
Q ss_pred CChhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 154 QNRKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 154 RtP~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
..++.+.+++++..+ ..++++|-.||..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 64 SDIESIQNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 345555555554432 2478888888865
No 196
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=61.02 E-value=45 Score=25.69 Aligned_cols=28 Identities=21% Similarity=0.166 Sum_probs=19.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 12 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 39 (260)
T 2zat_A 12 LENKVALVTASTD--GIGLAIARRLAQDGA 39 (260)
T ss_dssp TTTCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 4457888888887 456666666666663
No 197
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=60.95 E-value=51 Score=24.82 Aligned_cols=27 Identities=15% Similarity=0.151 Sum_probs=16.2
Q ss_pred ChhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 155 NRKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 155 tP~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
.++.+.++++...+ .+++++|-.||..
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 69 DMADVRRLTTHIVERYGHIDCLVNNAGVG 97 (244)
T ss_dssp SHHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEcCCcC
Confidence 44455555544322 2588999988864
No 198
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=60.91 E-value=37 Score=25.35 Aligned_cols=60 Identities=8% Similarity=-0.057 Sum_probs=33.9
Q ss_pred eEEEEeccCCCHHHHHHHHH-HHHHhCCCeeEEEEcCCCC------------hhHHHHHHHHHhhCCCeEEEEec
Q 029774 117 IVGIIMESDSDLPVMNDAAR-TLSDFGVPYEIKILSPHQN------------RKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~-vLeefGIpyDVrVaSAHRt------------P~~l~eyak~ae~~GvkVIIAvA 178 (188)
+|.||.||...-..-++.++ +++.+.-..++.++..... |+.+.++.+...+ ++.||-+.
T Consensus 8 kilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~--aD~ii~~s 80 (193)
T 1rtt_A 8 KVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRA--ADALLFAT 80 (193)
T ss_dssp EEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHH--CSEEEEEC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHh--CCEEEEEc
Confidence 79999999752233333333 3344432256777666553 3566666665555 45555543
No 199
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=60.81 E-value=47 Score=24.39 Aligned_cols=38 Identities=13% Similarity=-0.039 Sum_probs=25.3
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHhCCCeeEEEEcCC
Q 029774 116 PIVGIIMESDSD-----LPVMNDAARTLSDFGVPYEIKILSPH 153 (188)
Q Consensus 116 pkVaIIMGS~SD-----lpimekA~~vLeefGIpyDVrVaSAH 153 (188)
++|.||.||..- ..+++.+.+.|++-|-..++.++-..
T Consensus 2 mkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 2 SKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 489999999872 44566777777777633455555544
No 200
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=60.68 E-value=29 Score=29.44 Aligned_cols=65 Identities=17% Similarity=0.107 Sum_probs=47.1
Q ss_pred eEEEEeccC----CCHHHHHHHHHHHHHhCCCeeEEEEc-CCC-------C-hhHHHHHHHHHhhCCCeEEEEecCccCc
Q 029774 117 IVGIIMESD----SDLPVMNDAARTLSDFGVPYEIKILS-PHQ-------N-RKGALSYALSAKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 117 kVaIIMGS~----SDlpimekA~~vLeefGIpyDVrVaS-AHR-------t-P~~l~eyak~ae~~GvkVIIAvAGmAAH 183 (188)
+|+||.=|. .+-+..+.+.+.|+++|... .+.. +.+ + -+++.++.+...+..++.|+++-|+-+.
T Consensus 14 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v--~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (327)
T 4h1h_A 14 EIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKV--TFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNS 91 (327)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEE--EECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred EEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEE--EECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchhH
Confidence 799997653 36678899999999999743 3321 112 1 2577788877778889999999988543
No 201
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=60.61 E-value=34 Score=27.26 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=20.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
...++++|+|+.+ -+...++..|-+-|.
T Consensus 30 l~gk~~lVTGas~--GIG~aia~~la~~G~ 57 (276)
T 3r1i_A 30 LSGKRALITGAST--GIGKKVALAYAEAGA 57 (276)
T ss_dssp CTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 4467999999988 456667777777674
No 202
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=60.57 E-value=62 Score=25.70 Aligned_cols=30 Identities=27% Similarity=0.253 Sum_probs=20.4
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+++.++++|+|..+- +...+++.|-+-|.
T Consensus 21 ~~l~~k~~lVTGas~G--IG~~ia~~la~~G~ 50 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSG--IGLAIARTLAKAGA 50 (281)
T ss_dssp -CCTTCEEEEETCSSH--HHHHHHHHHHHTTC
T ss_pred hccCCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 3455689999999874 55566666666664
No 203
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=60.43 E-value=46 Score=26.16 Aligned_cols=101 Identities=10% Similarity=0.026 Sum_probs=59.2
Q ss_pred ceeeeeccccccccccccceeecccccceeecccCCCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc
Q 029774 72 TIPVLASSNGSATSTRKDYSSVREPSTVFEEENANGDSTGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS 151 (188)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS 151 (188)
.||.++.+.. .+.+.+|..-.-+.+. .+.-.-...- .-.+|+||.-.+.....++...+.+++.|+.......
T Consensus 93 ~ip~is~~~~--~~~~~~~~~~~~~~~~---~a~~~l~~~~-~w~~vaii~~~d~~~~~~~~~~~~~~~~g~~v~~~~~- 165 (389)
T 4gpa_A 93 HISLITPSFP--TEGESQFVLQLRPSLR---GALLSLLDHY-EWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICV- 165 (389)
T ss_dssp TCEEEECSCC--CSSCCSSEEECSCCCH---HHHHHHHHHT-TCCEEEEEECSTTCSHHHHHHHHHHHTTTCEEEEEEC-
T ss_pred CCCceecccc--ccccccCCccccCCHH---HHHHHHHHHc-CCcEEEEEEecchhhHHHHHHHHHHHhcCceEEEEee-
Confidence 5888876543 3455566543333211 0000000011 1247999988777778888888888899987654433
Q ss_pred CCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 152 PHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 152 AHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.-.........++..++.+.++||....
T Consensus 166 ~~~~~~d~~~~l~~i~~~~~~vIv~~~~ 193 (389)
T 4gpa_A 166 ENFNDVSYRQLLEELDRRQEKKFVIDCE 193 (389)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCcchhHHHHHHHhhccCCcEEEEEec
Confidence 2333445566666676777888887643
No 204
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=60.39 E-value=30 Score=27.44 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=19.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 26 l~~k~~lVTGas~--GIG~aia~~la~~G~ 53 (270)
T 3ftp_A 26 LDKQVAIVTGASR--GIGRAIALELARRGA 53 (270)
T ss_dssp TTTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 4567999999887 455666666666664
No 205
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=60.33 E-value=47 Score=26.24 Aligned_cols=63 Identities=17% Similarity=0.244 Sum_probs=40.9
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHH------------------------HHHHHh
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS------------------------YALSAK 167 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~e------------------------yak~ae 167 (188)
.++++++++|+|+.+ -+...+++.|-+-|. .+ +-.-|+++++.+ +++..
T Consensus 12 ~~l~gk~vlVTGas~--gIG~~~a~~L~~~G~--~V--~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~- 84 (291)
T 3rd5_A 12 PSFAQRTVVITGANS--GLGAVTARELARRGA--TV--IMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV- 84 (291)
T ss_dssp CCCTTCEEEEECCSS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred cCCCCCEEEEeCCCC--hHHHHHHHHHHHCCC--EE--EEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc-
Confidence 345568999999998 456778888877774 33 333455554443 33222
Q ss_pred hCCCeEEEEecCccC
Q 029774 168 ERGIKIIIVGDGVEA 182 (188)
Q Consensus 168 ~~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 85 -~~iD~lv~nAg~~~ 98 (291)
T 3rd5_A 85 -SGADVLINNAGIMA 98 (291)
T ss_dssp -CCEEEEEECCCCCS
T ss_pred -CCCCEEEECCcCCC
Confidence 25799999998754
No 206
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=60.09 E-value=56 Score=25.59 Aligned_cols=28 Identities=7% Similarity=0.118 Sum_probs=18.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 19 l~~k~vlVTGas~--gIG~aia~~l~~~G~ 46 (273)
T 1ae1_A 19 LKGTTALVTGGSK--GIGYAIVEELAGLGA 46 (273)
T ss_dssp CTTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCcc--hHHHHHHHHHHHCCC
Confidence 3457888888876 445566666666663
No 207
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=59.68 E-value=22 Score=28.13 Aligned_cols=60 Identities=13% Similarity=0.099 Sum_probs=47.3
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCC----eeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVP----YEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIp----yDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.|++ ..+.|-+|-=.|--..++++ ..+++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIalG 79 (154)
T 1hqk_A 13 LRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELAR---KEDIDAVIAIG 79 (154)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHT---CTTCCEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999998 7789999999999997 34567778777776666653 45689998853
No 208
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=59.67 E-value=31 Score=28.57 Aligned_cols=57 Identities=11% Similarity=0.024 Sum_probs=44.0
Q ss_pred eEEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEcC------CC-ChhHHHHHHHHHhhCCCeEE
Q 029774 117 IVGIIMESDSDL--------------PVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKII 174 (188)
Q Consensus 117 kVaIIMGS~SDl--------------pimekA~~vLeefGIpyDVrVaSA------HR-tP~~l~eyak~ae~~GvkVI 174 (188)
.|.| .++.||. +.+.++.+.+++.|++.++.+.-+ .| +|+.+.++++.+.+-|++.|
T Consensus 96 ~v~i-~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 96 EVVI-FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp EEEE-EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEE-EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 4554 6688887 567788889999999888777633 24 58999999999988898754
No 209
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=59.63 E-value=7.9 Score=30.80 Aligned_cols=54 Identities=9% Similarity=0.155 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh-hCCCeEEEEecCccCcCcCC
Q 029774 132 NDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVGDGVEAHLSGT 187 (188)
Q Consensus 132 ekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae-~~GvkVIIAvAGmAAHLPGV 187 (188)
+++.+.+++-|| ++.|.|.+|+.++=.++..... ..|..+.-|-.|.|.|-.|.
T Consensus 42 ~~m~~~a~~~Gi--~l~i~sgyRs~~~Q~~Ly~~~~~~~g~~~~~a~pg~S~H~~G~ 96 (179)
T 2vo9_A 42 RNVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHCCC--eEEEEEEECCHHHHHHHHHHhcccCCCceecCCCCCCCCCCcc
Confidence 334444455566 6899999999999999875432 34555555667888888774
No 210
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=59.57 E-value=47 Score=25.61 Aligned_cols=61 Identities=11% Similarity=-0.042 Sum_probs=36.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHH------------------------HHHHHHHhh--
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGA------------------------LSYALSAKE-- 168 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l------------------------~eyak~ae~-- 168 (188)
.+++++|+|+.+ -+....++.|-+-|. . |+-.-|+++++ .++++...+
T Consensus 2 s~k~vlVTGas~--GIG~a~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 2 SLGHIIVTGAGS--GLGRALTIGLVERGH--Q--VSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp -CCEEEEESTTS--HHHHHHHHHHHHTTC--E--EEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC--E--EEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 346888888887 456666777766664 2 33333444443 344433322
Q ss_pred CCCeEEEEecCcc
Q 029774 169 RGIKIIIVGDGVE 181 (188)
Q Consensus 169 ~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 76 g~id~lvnnAg~~ 88 (235)
T 3l6e_A 76 GLPELVLHCAGTG 88 (235)
T ss_dssp CSCSEEEEECCCC
T ss_pred CCCcEEEECCCCC
Confidence 3579999999874
No 211
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=59.49 E-value=54 Score=25.89 Aligned_cols=66 Identities=11% Similarity=0.117 Sum_probs=42.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC--------------CChhHHHHHHHHHhh--CCCeEEEE
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH--------------QNRKGALSYALSAKE--RGIKIIIV 176 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH--------------RtP~~l~eyak~ae~--~GvkVIIA 176 (188)
+.+.++++|+|+.+ -+...+++.|-+-|. .+-+++-. +.++.+.++++...+ .+++++|-
T Consensus 25 ~l~gk~vlVTGas~--gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 25 GFEGKVALVTGAAG--GIGGAVVTALRAAGA--RVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp -CTTCEEEESSTTS--HHHHHHHHHHHHTTC--EEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 34568999999998 567778888888785 33333211 123445555544332 36899999
Q ss_pred ecCccC
Q 029774 177 GDGVEA 182 (188)
Q Consensus 177 vAGmAA 182 (188)
.||...
T Consensus 101 nAg~~~ 106 (266)
T 3uxy_A 101 NAGVIS 106 (266)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 999754
No 212
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=59.21 E-value=47 Score=25.11 Aligned_cols=65 Identities=17% Similarity=0.111 Sum_probs=38.9
Q ss_pred CCeEEEEeccCC------------CHHHHHHHHHHHHHhCCCe-eEEEEcCCCChhHHHHHHHHH-hhCCCeEEEEecCc
Q 029774 115 TPIVGIIMESDS------------DLPVMNDAARTLSDFGVPY-EIKILSPHQNRKGALSYALSA-KERGIKIIIVGDGV 180 (188)
Q Consensus 115 ~pkVaIIMGS~S------------DlpimekA~~vLeefGIpy-DVrVaSAHRtP~~l~eyak~a-e~~GvkVIIAvAGm 180 (188)
..+|+||+=|++ |-. ..-..+.|+++|++. +..++. =.++.+.+-++.+ +.+.++++|.-.|.
T Consensus 15 ~~~v~iitvsd~~~~~~~~~g~i~D~n-g~~L~~~L~~~G~~v~~~~iV~--Dd~~~i~~al~~~~a~~~~DlVittGG~ 91 (178)
T 3iwt_A 15 SLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLVP--DDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEEC--SCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCEEEEEEEcCCCccccccCCCCCcch-HHHHHHHHHHCCCEEEEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEecCCc
Confidence 357999987763 321 234678899999864 333332 2334444433332 34568999998887
Q ss_pred cC
Q 029774 181 EA 182 (188)
Q Consensus 181 AA 182 (188)
+.
T Consensus 92 g~ 93 (178)
T 3iwt_A 92 GY 93 (178)
T ss_dssp SS
T ss_pred cc
Confidence 53
No 213
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=59.20 E-value=33 Score=23.95 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=40.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHH-HHhhCCC-eEEE
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYAL-SAKERGI-KIII 175 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak-~ae~~Gv-kVII 175 (188)
+|.|.+- +.=|.+++|...|+++|++|+..=+.-|..+..+.+.++ ......+ .|||
T Consensus 18 ~v~vy~~--~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi 76 (114)
T 3h8q_A 18 RVVIFSK--SYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV 76 (114)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEc--CCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE
Confidence 4666554 556999999999999999998888887766666666553 2222333 5665
No 214
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=59.02 E-value=35 Score=23.93 Aligned_cols=51 Identities=14% Similarity=0.068 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhCC-CeeEEEEcCCCChhHHHHHHHH-HhhCCCeEEEEecCccCc
Q 029774 130 VMNDAARTLSDFGV-PYEIKILSPHQNRKGALSYALS-AKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 130 imekA~~vLeefGI-pyDVrVaSAHRtP~~l~eyak~-ae~~GvkVIIAvAGmAAH 183 (188)
.++++.+.+++.|+ +++..+...... ..++++. +++.+++++|.++-.-..
T Consensus 80 ~l~~~~~~~~~~g~~~~~~~v~~~g~~---~~~I~~~~a~~~~~DlIV~G~~g~~~ 132 (156)
T 3fg9_A 80 VVAEYVQLAEQRGVNQVEPLVYEGGDV---DDVILEQVIPEFKPDLLVTGADTEFP 132 (156)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEECSCH---HHHHHHTHHHHHCCSEEEEETTCCCT
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCCCH---HHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 34455556677899 488888753333 3445555 556789999988754433
No 215
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=58.87 E-value=15 Score=29.18 Aligned_cols=60 Identities=8% Similarity=-0.129 Sum_probs=47.3
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCe----eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPY----EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpy----DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.|++. .++|-+|-=.|--..++++ ..+++.+||..
T Consensus 11 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 77 (158)
T 1di0_A 11 FKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLAR---TGRYAAIVGAA 77 (158)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999998 77889999999999973 4456677777776666654 45689998853
No 216
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=58.87 E-value=37 Score=29.03 Aligned_cols=51 Identities=12% Similarity=0.016 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 130 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 130 imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
..+-+..+++++|++.-.++..-.|+.+.+.+++..+...|++=|.|..|=
T Consensus 70 t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 70 THSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 445555667789999999999999999999999999999999989988874
No 217
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=58.66 E-value=0.98 Score=38.61 Aligned_cols=64 Identities=8% Similarity=0.041 Sum_probs=41.7
Q ss_pred CeEEEEeccCCCHHH-HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 116 PIVGIIMESDSDLPV-MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpi-mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+|.||++....-.. .++..+.|++-| .++.+.+-+-+.+.+.+.++.+++ +.++|||+-|++.
T Consensus 42 ~~~liVtd~~~~~~~~~~~v~~~L~~~g--~~~~~~~ge~~~~~v~~~~~~~~~-~~d~IIavGGGsv 106 (376)
T 1kq3_A 42 ERAFVVIDDFVDKNVLGENFFSSFTKVR--VNKQIFGGECSDEEIERLSGLVEE-ETDVVVGIGGGKT 106 (376)
T ss_dssp SEEEEEECHHHHHHTTCTTGGGGCSSSE--EEEEECCSSCBHHHHHHHHTTCCT-TCCEEEEEESHHH
T ss_pred CeEEEEECccHHhhccHHHHHHHHHHcC--CeEEEeCCCCCHHHHHHHHHHHhc-CCCEEEEeCCcHH
Confidence 479999986432222 445555565555 344555555555577777776667 8999999999763
No 218
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=58.63 E-value=61 Score=24.99 Aligned_cols=65 Identities=9% Similarity=0.110 Sum_probs=43.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------CCChhHHHHHHHHHhh--CCCeEEEEe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------HQNRKGALSYALSAKE--RGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA--------------HRtP~~l~eyak~ae~--~GvkVIIAv 177 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.++++...+ .+++++|-.
T Consensus 13 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 13 FVSRSVLVTGGNR--GIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4567999999988 567788888888784 4444321 1234556666655432 358999999
Q ss_pred cCccC
Q 029774 178 DGVEA 182 (188)
Q Consensus 178 AGmAA 182 (188)
||...
T Consensus 89 Ag~~~ 93 (247)
T 1uzm_A 89 AGLSA 93 (247)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 99753
No 219
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=58.58 E-value=29 Score=32.34 Aligned_cols=58 Identities=17% Similarity=0.070 Sum_probs=45.9
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--cCCC-ChhHHHHHHHHHhhCCCeEE
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL--SPHQ-NRKGALSYALSAKERGIKII 174 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVa--SAHR-tP~~l~eyak~ae~~GvkVI 174 (188)
.+.-|..+.||+.-++++.+.+++.|...+..+. ...| +|+.+.++++.+.+-|++.|
T Consensus 132 d~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I 192 (539)
T 1rqb_A 132 DVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSI 192 (539)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred CEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3555678999999999999999999997765562 2222 68999999999988898754
No 220
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=58.56 E-value=61 Score=25.04 Aligned_cols=63 Identities=11% Similarity=0.161 Sum_probs=39.3
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh------------------------HHHHHHHHHhh
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE 168 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~------------------------~l~eyak~ae~ 168 (188)
.+..++++|+|..+ -+...+++.|-+-|. . |+-..|+++ .+.++++...+
T Consensus 3 ~l~gk~vlVTGas~--gIG~a~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 3 RLAGKTALVTGAAQ--GIGKAIAARLAADGA--T--VIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76 (247)
T ss_dssp TTTTCEEEEETTTS--HHHHHHHHHHHHTTC--E--EEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCC--HHHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 34567999999987 456667777777674 2 232344444 44444443322
Q ss_pred --CCCeEEEEecCcc
Q 029774 169 --RGIKIIIVGDGVE 181 (188)
Q Consensus 169 --~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 77 ~~g~id~lv~nAg~~ 91 (247)
T 3rwb_A 77 LTGGIDILVNNASIV 91 (247)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred HCCCCCEEEECCCCC
Confidence 3689999999875
No 221
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=58.42 E-value=24 Score=27.92 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=39.2
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 116 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 116 pkVaIIMGS~SDlp--imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.+|+||.+..+|+. ..+...+.|++.|++...... ..........++...+.++++|++.
T Consensus 150 ~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~--~~~~~d~~~~~~~l~~~~~d~v~~~ 211 (366)
T 3td9_A 150 KRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFF--RSGDQDFSAQLSVAMSFNPDAIYIT 211 (366)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEE--CTTCCCCHHHHHHHHHTCCSEEEEC
T ss_pred cEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEe--CCCCccHHHHHHHHHhcCCCEEEEc
Confidence 47999987655543 456677888999997644442 2233444455666666678888874
No 222
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=58.37 E-value=60 Score=25.62 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=42.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------------CCChhHHHHHHHHHhh--CCCe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-------------------HQNRKGALSYALSAKE--RGIK 172 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA-------------------HRtP~~l~eyak~ae~--~Gvk 172 (188)
++.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ .+++
T Consensus 14 ~~~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 89 (266)
T 3p19_A 14 SMKKLVVITGASS--GIGEAIARRFSEEGHP--LLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPAD 89 (266)
T ss_dssp -CCCEEEEESTTS--HHHHHHHHHHHHTTCC--EEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence 3458999999998 4667788888877853 322221 1234555556654433 3689
Q ss_pred EEEEecCccC
Q 029774 173 IIIVGDGVEA 182 (188)
Q Consensus 173 VIIAvAGmAA 182 (188)
++|-.||...
T Consensus 90 ~lvnnAg~~~ 99 (266)
T 3p19_A 90 AIVNNAGMML 99 (266)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCcCC
Confidence 9999999753
No 223
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=58.21 E-value=49 Score=25.76 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=18.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 10 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 37 (256)
T 3gaf_A 10 LNDAVAIVTGAAA--GIGRAIAGTFAKAGA 37 (256)
T ss_dssp CTTCEEEECSCSS--HHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 4457888999887 345555566655554
No 224
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=58.15 E-value=39 Score=23.16 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=31.6
Q ss_pred HHHHHHHHH----hCC-CeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029774 132 NDAARTLSD----FGV-PYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 132 ekA~~vLee----fGI-pyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLP 185 (188)
+++.+.|++ .|+ +++..+..- . -...+++.+++.+++.+|.++-.-..+.
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~g--~--~~~~I~~~a~~~~~dliV~G~~~~~~~~ 114 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLEG--V--PAEAILQAARAEKADLIVMGTRGLGALG 114 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEES--S--HHHHHHHHHHHTTCSEEEEESSCTTCCS
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEec--C--HHHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 344444544 788 888776632 2 3445666667778999998876544443
No 225
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=58.15 E-value=27 Score=28.07 Aligned_cols=67 Identities=9% Similarity=0.100 Sum_probs=42.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCChhHHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS------------------------PHQNRKGALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS------------------------AHRtP~~l~eyak~ae~- 168 (188)
++.++++|+|..|..-+...+++.|-+-|.. |-+.+ =-..++.+.++++...+
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAE--VALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4468999999988555677777777777753 22222 12334555555554432
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 106 ~g~iD~lVnnAG~~~ 120 (296)
T 3k31_A 106 WGSLDFVVHAVAFSD 120 (296)
T ss_dssp HSCCSEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 36899999998753
No 226
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=58.12 E-value=49 Score=25.67 Aligned_cols=66 Identities=9% Similarity=0.029 Sum_probs=39.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC------------------------CCChhHHHHHHHHHhhC-
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP------------------------HQNRKGALSYALSAKER- 169 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA------------------------HRtP~~l~eyak~ae~~- 169 (188)
+.++++|+|..|.--+...+++.|-+-|. +|.+++- -..++.+.++++...++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35788889987444466677777776664 3333321 12234444555444322
Q ss_pred -CCeEEEEecCccC
Q 029774 170 -GIKIIIVGDGVEA 182 (188)
Q Consensus 170 -GvkVIIAvAGmAA 182 (188)
+++++|-.||...
T Consensus 86 g~iD~lv~~Ag~~~ 99 (265)
T 1qsg_A 86 PKFDGFVHSIGFAP 99 (265)
T ss_dssp SSEEEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 5799999999653
No 227
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=58.00 E-value=64 Score=25.27 Aligned_cols=65 Identities=17% Similarity=0.119 Sum_probs=44.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------CCChhHHHHHHHHHhh--CCCeEEEEe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------HQNRKGALSYALSAKE--RGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA--------------HRtP~~l~eyak~ae~--~GvkVIIAv 177 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.++++...+ .+++++|-.
T Consensus 6 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~ 81 (264)
T 2dtx_A 6 LRDKVVIVTGASM--GIGRAIAERFVDEGS--KVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNN 81 (264)
T ss_dssp GTTCEEEEESCSS--HHHHHHHHHHHHTTC--EEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4457999999988 567778888887775 3433321 1335667777655433 368999999
Q ss_pred cCccC
Q 029774 178 DGVEA 182 (188)
Q Consensus 178 AGmAA 182 (188)
||...
T Consensus 82 Ag~~~ 86 (264)
T 2dtx_A 82 AGIES 86 (264)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99753
No 228
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=57.89 E-value=39 Score=26.65 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=43.8
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|++++...++ ..+.+.+.+.+++.|. ++.+...+-.++...++++....++++-+|...
T Consensus 60 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~ 124 (332)
T 2hsg_A 60 TTTVGVIIPDISNIFYAELARGIEDIATMYKY--NIILSNSDQNQDKELHLLNNMLGKQVDGIIFMS 124 (332)
T ss_dssp CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTC--EEEEEECCSHHHHHHHHHHHTSCCSSCCEEECC
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEec
Confidence 3579999876544 3567777888888885 555666666777777888877777888777654
No 229
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=57.72 E-value=49 Score=25.49 Aligned_cols=26 Identities=23% Similarity=0.440 Sum_probs=15.1
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
++.+.++++...+ .+++++|-.||..
T Consensus 63 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 90 (256)
T 1geg_A 63 RDQVFAAVEQARKTLGGFDVIVNNAGVA 90 (256)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4444444443322 2578899888864
No 230
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=57.67 E-value=50 Score=23.77 Aligned_cols=58 Identities=9% Similarity=0.107 Sum_probs=44.3
Q ss_pred CCeEEEEeccCCCHHH--HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCcc
Q 029774 115 TPIVGIIMESDSDLPV--MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpi--mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmA 181 (188)
+.+|.+++|+--=-.. +.+..+.+++.|++.++...+..-.++. . .++++||...-..
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~----~-----~~~DlIist~~l~ 80 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETY----M-----DGVHLICTTARVD 80 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTS----T-----TSCSEEEESSCCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhc----c-----CCCCEEEECCccc
Confidence 3479999998766555 5899999999999998888888776552 1 2478998876654
No 231
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=57.52 E-value=24 Score=27.15 Aligned_cols=41 Identities=15% Similarity=0.154 Sum_probs=29.5
Q ss_pred CCCeEEEEecc----------CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 029774 114 DTPIVGIIMES----------DSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 156 (188)
Q Consensus 114 ~~pkVaIIMGS----------~SDlpimekA~~vLeefGIpyDVrVaSAHRtP 156 (188)
|+++|+|+..+ ..++.-+-...++|++-| |++.++|.+..|
T Consensus 4 m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag--~~v~~vs~~~~~ 54 (224)
T 1u9c_A 4 MSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG--YDVKVASIQGGE 54 (224)
T ss_dssp CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT--CEEEEEESSCBC
T ss_pred CCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC--CeEEEECCCCCc
Confidence 54689999984 334445556677787766 799999988754
No 232
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=57.47 E-value=16 Score=28.55 Aligned_cols=40 Identities=13% Similarity=0.153 Sum_probs=28.3
Q ss_pred CCCeEEEEeccCCC-HH----HHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029774 114 DTPIVGIIMESDSD-LP----VMNDAARTLSDFGVPYEIKILSPHQN 155 (188)
Q Consensus 114 ~~pkVaIIMGS~SD-lp----imekA~~vLeefGIpyDVrVaSAHRt 155 (188)
|+.+|+|++|+.|. .+ ..+...+.|++.|+ ++.++.....
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~--~v~~~~~~~~ 45 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGI--DAYPVDPKEV 45 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTC--EEEEECTTTS
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCC--eEEEEecCch
Confidence 45689999999884 22 45678888999997 4566665533
No 233
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=57.33 E-value=46 Score=25.99 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=25.5
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
+.++++|+|..+- +...+++.|-+-|. . |+-..|+++.+.+..
T Consensus 9 ~~k~~lVTGas~g--IG~aia~~l~~~G~--~--V~~~~r~~~~~~~~~ 51 (267)
T 3t4x_A 9 KGKTALVTGSTAG--IGKAIATSLVAEGA--N--VLINGRREENVNETI 51 (267)
T ss_dssp TTCEEEETTCSSH--HHHHHHHHHHHTTC--E--EEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHH
Confidence 3578999998874 45566666666664 2 223345555544443
No 234
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=57.25 E-value=51 Score=25.25 Aligned_cols=28 Identities=14% Similarity=0.274 Sum_probs=17.3
Q ss_pred CChhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 154 QNRKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 154 RtP~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
..++.+.++++...+ .+++++|-.||..
T Consensus 64 ~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 64 ANAEDVTNMVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 345555555544322 3689999988864
No 235
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=57.11 E-value=64 Score=24.78 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=40.9
Q ss_pred CCeEEEEeccCC-----CHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC-CCeEEEEecCccC
Q 029774 115 TPIVGIIMESDS-----DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEA 182 (188)
Q Consensus 115 ~pkVaIIMGS~S-----DlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~-GvkVIIAvAGmAA 182 (188)
+++|+||+=|+. |-. ..-....|+++|+......+- --.++.+.+-++++.++ +++++|.-.|.+.
T Consensus 10 ~~~v~Ii~tGdE~g~i~D~n-~~~l~~~L~~~G~~v~~~~iv-~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 10 PTRIAILTVSNRRGEEDDTS-GHYLRDSAQEAGHHVVDKAIV-KENRYAIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp CCEEEEEEECSSCCGGGCHH-HHHHHHHHHHTTCEEEEEEEE-CSCHHHHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred CCEEEEEEEeCCCCcccCcc-HHHHHHHHHHCCCeEeEEEEe-CCCHHHHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 357888874432 332 234677889999864332222 23566677766666555 6899998887653
No 236
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=57.07 E-value=59 Score=25.14 Aligned_cols=63 Identities=3% Similarity=-0.027 Sum_probs=44.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCChhHHHHHHHHHhh--CCCeEEEEecCc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-------------HQNRKGALSYALSAKE--RGIKIIIVGDGV 180 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA-------------HRtP~~l~eyak~ae~--~GvkVIIAvAGm 180 (188)
.++++|+|..+ -+...+++.|-+-|.. +.+++- -..++.+.++++...+ ..++++|-.||.
T Consensus 22 ~k~vlITGas~--gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~ 97 (251)
T 3orf_A 22 SKNILVLGGSG--ALGAEVVKFFKSKSWN--TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG 97 (251)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTCE--EEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 57999999998 4667888888887853 433331 2446777777776643 357999999996
Q ss_pred cC
Q 029774 181 EA 182 (188)
Q Consensus 181 AA 182 (188)
..
T Consensus 98 ~~ 99 (251)
T 3orf_A 98 WS 99 (251)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 237
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=56.89 E-value=74 Score=25.42 Aligned_cols=28 Identities=21% Similarity=0.081 Sum_probs=20.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
..+++++|+|..+- +...++..|-+-|.
T Consensus 26 l~gk~~lVTGas~G--IG~aia~~la~~G~ 53 (299)
T 3t7c_A 26 VEGKVAFITGAARG--QGRSHAITLAREGA 53 (299)
T ss_dssp TTTCEEEEESTTSH--HHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 45689999999884 55666666666664
No 238
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=56.52 E-value=41 Score=25.47 Aligned_cols=29 Identities=17% Similarity=0.114 Sum_probs=19.2
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+..++++|+|..+- +...+++.|-+-|.
T Consensus 11 ~l~~k~vlITGas~g--IG~~ia~~l~~~G~ 39 (247)
T 3i1j_A 11 LLKGRVILVTGAARG--IGAAAARAYAAHGA 39 (247)
T ss_dssp TTTTCEEEESSTTSH--HHHHHHHHHHHTTC
T ss_pred cCCCCEEEEeCCCCh--HHHHHHHHHHHCCC
Confidence 445678999998874 45556666666563
No 239
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.51 E-value=23 Score=27.84 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=38.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.+|+|+. ..+-. ..+..+.+-||++.+.... .+++++.+.++.++++|++|+|+.
T Consensus 95 ~kIavvg-~~~~~---~~~~~~~~ll~~~i~~~~~---~~~~e~~~~i~~l~~~G~~vvVG~ 149 (196)
T 2q5c_A 95 NELALIA-YKHSI---VDKHEIEAMLGVKIKEFLF---SSEDEITTLISKVKTENIKIVVSG 149 (196)
T ss_dssp SEEEEEE-ESSCS---SCHHHHHHHHTCEEEEEEE---CSGGGHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEe-Ccchh---hHHHHHHHHhCCceEEEEe---CCHHHHHHHHHHHHHCCCeEEECC
Confidence 4788873 33333 3344555567876555444 688999999999999999999985
No 240
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=56.40 E-value=39 Score=26.88 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=20.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+.++++|+|..+ -+...++..|-+-|.
T Consensus 31 l~gk~~lVTGas~--GIG~aia~~la~~G~ 58 (275)
T 4imr_A 31 LRGRTALVTGSSR--GIGAAIAEGLAGAGA 58 (275)
T ss_dssp CTTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 3457999999887 456667777776674
No 241
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=56.37 E-value=23 Score=27.34 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=38.1
Q ss_pred CCCeEEEEeccCCCHH------HHHHHHHHHHHhCCCee-EEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 114 DTPIVGIIMESDSDLP------VMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlp------imekA~~vLeefGIpyD-VrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+++|+||+=|+.=.+ -..-....|+++|++.. ..++ .- . +.+.+-++++.+++++++|.-.|.+.
T Consensus 6 ~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv-~D-d-~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 6 TTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVV-AD-G-SPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp -CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEE-CS-S-HHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEe-CC-H-HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 3578999876543110 12345678889998642 2333 22 2 44554444444456899998888764
No 242
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=56.26 E-value=42 Score=25.99 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=41.5
Q ss_pred CCeEEEEec----cCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 115 TPIVGIIME----SDSD---LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMG----S~SD---lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
...|++++- +.+| ..+.+.+.+.+++.|. ++.+...+- ++...++++....++++-+|....
T Consensus 6 s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~ 74 (294)
T 3qk7_A 6 TDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGL--DLLLIPDEP-GEKYQSLIHLVETRRVDALIVAHT 74 (294)
T ss_dssp CCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTC--EEEEEEECT-TCCCHHHHHHHHHTCCSEEEECSC
T ss_pred cceEEEEecCCCccccChhHHHHHHHHHHHHHHCCC--EEEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCC
Confidence 347999997 4444 3467778888889986 455555443 555566666666777887776554
No 243
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=56.23 E-value=25 Score=28.05 Aligned_cols=48 Identities=13% Similarity=0.115 Sum_probs=32.4
Q ss_pred CeEEEEe-cc--CCCHHHHHHHHHHHHHhCCCeeEEEEc-CCCChhHHHHHHHH
Q 029774 116 PIVGIIM-ES--DSDLPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALS 165 (188)
Q Consensus 116 pkVaIIM-GS--~SDlpimekA~~vLeefGIpyDVrVaS-AHRtP~~l~eyak~ 165 (188)
++|++|- +| .+.-+..+...+.|+++|+ ++.++. .++.|++..+.+++
T Consensus 28 ~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~--~v~~~~i~~~~~~~~~~~l~~ 79 (206)
T 3l4e_A 28 KTVTFIPTASTVEEVTFYVEAGKKALESLGL--LVEELDIATESLGEITTKLRK 79 (206)
T ss_dssp CEEEEECGGGGGCSCCHHHHHHHHHHHHTTC--EEEECCTTTSCHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHcCC--eEEEEEecCCChHHHHHHHHh
Confidence 5788884 33 3445688999999999998 455553 22567666666653
No 244
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=56.19 E-value=62 Score=24.76 Aligned_cols=26 Identities=8% Similarity=0.198 Sum_probs=17.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFG 142 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefG 142 (188)
+.++.+|+|..+ -+...+++.|-+-|
T Consensus 13 ~~k~vlITGasg--giG~~la~~l~~~G 38 (266)
T 1xq1_A 13 KAKTVLVTGGTK--GIGHAIVEEFAGFG 38 (266)
T ss_dssp TTCEEEETTTTS--HHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCC
Confidence 456888888877 35556666666656
No 245
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=56.16 E-value=63 Score=25.88 Aligned_cols=61 Identities=7% Similarity=0.123 Sum_probs=42.0
Q ss_pred CCeEEEEeccCCC---HHHHHHHHHHHHHhCCCeeEEEEcCCCC-hhHHHHHHHHHhhCCCeEEEEe
Q 029774 115 TPIVGIIMESDSD---LPVMNDAARTLSDFGVPYEIKILSPHQN-RKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 115 ~pkVaIIMGS~SD---lpimekA~~vLeefGIpyDVrVaSAHRt-P~~l~eyak~ae~~GvkVIIAv 177 (188)
...|++++.+.++ ..+.+.+.+.+++.|. ++.+...+.. ++...++++.+..++++-+|..
T Consensus 61 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~~vdGiIi~ 125 (349)
T 1jye_A 61 SLLIGVATSSLALHAPSQIVAAILSRADQLGA--SVVVSMVERSGVEACKTAVHNLLAQRVSGLIIN 125 (349)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEE
T ss_pred CCEEEEEeCCCCcccHHHHHHHHHHHHHHcCC--EEEEEeCCCCcHHHHHHHHHHHHHCCCCEEEEe
Confidence 3579999976655 2456777788888885 5555666554 5666677777767778777765
No 246
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=56.10 E-value=71 Score=25.02 Aligned_cols=28 Identities=14% Similarity=0.057 Sum_probs=20.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
..+++++|+|+.+- +...++..|-+-|.
T Consensus 9 l~~k~~lVTGas~g--IG~aia~~la~~G~ 36 (286)
T 3uve_A 9 VEGKVAFVTGAARG--QGRSHAVRLAQEGA 36 (286)
T ss_dssp TTTCEEEEESTTSH--HHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCch--HHHHHHHHHHHCCC
Confidence 34679999999874 56667777776664
No 247
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=55.89 E-value=71 Score=24.91 Aligned_cols=53 Identities=11% Similarity=0.089 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCc
Q 029774 127 DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 127 DlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAH 183 (188)
+....+++.+.|++.|++++..+..- +....+.+.+++.+++++|.++-.-+.
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dLlV~G~~~~~~ 264 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIESG----TPHKAILAKREEINATTIFMGSRGAGS 264 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECS----CHHHHHHHHHHHTTCSEEEEECCCCSC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhcCcCEEEEeCCCCCC
Confidence 56777888888888888877777643 334455566667788888888765443
No 248
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=55.87 E-value=57 Score=25.56 Aligned_cols=28 Identities=18% Similarity=0.065 Sum_probs=18.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 4 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 31 (280)
T 1xkq_A 4 FSNKTVIITGSSN--GIGRTTAILFAQEGA 31 (280)
T ss_dssp TTTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 3456888888877 455556666666563
No 249
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=55.85 E-value=27 Score=28.58 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=55.3
Q ss_pred eeeeccccccccccccceeecccccceeecccCCC-----CCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEE
Q 029774 74 PVLASSNGSATSTRKDYSSVREPSTVFEEENANGD-----STGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIK 148 (188)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVr 148 (188)
-||-|--+.+.--|+ ..+.|+-+-..---| .++.....+|+|+ |..+-.+ .+..+.+-||++.+..
T Consensus 65 dVIISRGgta~~Lr~-----~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavV-g~~~~~~---~~~~i~~ll~~~i~~~ 135 (225)
T 2pju_A 65 DAIIAAGSNGAYLKS-----RLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVV-TYQETIP---ALVAFQKTFNLRLDQR 135 (225)
T ss_dssp SEEEEEHHHHHHHHT-----TCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEE-EESSCCH---HHHHHHHHHTCCEEEE
T ss_pred eEEEeCChHHHHHHh-----hCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEE-eCchhhh---HHHHHHHHhCCceEEE
Confidence 355555555533332 234555443322222 2333334578888 4444433 4455566688876555
Q ss_pred EEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 149 ILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 149 VaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
. -.+++++.+.++.++++|++|||+.
T Consensus 136 ~---~~~~ee~~~~i~~l~~~G~~vVVG~ 161 (225)
T 2pju_A 136 S---YITEEDARGQINELKANGTEAVVGA 161 (225)
T ss_dssp E---ESSHHHHHHHHHHHHHTTCCEEEES
T ss_pred E---eCCHHHHHHHHHHHHHCCCCEEECC
Confidence 4 3578999999999999999999985
No 250
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=55.67 E-value=7.6 Score=32.83 Aligned_cols=39 Identities=13% Similarity=0.116 Sum_probs=27.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHh-CCCeeEEEEcCCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDF-GVPYEIKILSPHQ 154 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeef-GIpyDVrVaSAHR 154 (188)
++|++|+|..++.-.+......|++- ++++.+-+.+-|+
T Consensus 26 ~ki~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~ 65 (396)
T 3dzc_A 26 KKVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHR 65 (396)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSS
T ss_pred CeEEEEEeccHhHHHHHHHHHHHHhCCCCcEEEEEecccH
Confidence 47888888888777777777777765 4555555666676
No 251
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=55.56 E-value=27 Score=27.01 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=32.6
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ 154 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHR 154 (188)
.|+++|+|+.....+..-+-...++|+.-| |++.++|.+.
T Consensus 7 ~m~~~v~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~g 46 (208)
T 3ot1_A 7 GMSKRILVPVAHGSEEMETVIIVDTLVRAG--FQVTMAAVGD 46 (208)
T ss_dssp --CCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred ccCCeEEEEECCCCcHHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence 466789999998888888888889999877 7999999873
No 252
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=55.56 E-value=47 Score=24.72 Aligned_cols=57 Identities=11% Similarity=0.069 Sum_probs=37.2
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhCC-CeeEEEEcCCCChhHHHHHHHHHhh-CC-CeEEEE
Q 029774 117 IVGIIMESDSDL---PVMNDAARTLSDFGV-PYEIKILSPHQNRKGALSYALSAKE-RG-IKIIIV 176 (188)
Q Consensus 117 kVaIIMGS~SDl---pimekA~~vLeefGI-pyDVrVaSAHRtP~~l~eyak~ae~-~G-vkVIIA 176 (188)
+|.|.|=|+-+. |.+.+|..+|+++|+ +|+..-+.. .|+ +.++++..-+ +- +.|||-
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~--~~~-~r~~l~~~sg~~TvPqIFI~ 83 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPE-LRQGIKDYSNWPTIPQVYLN 83 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTS--CHH-HHHHHHHHHTCCSSCEEEET
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccC--CHH-HHHHHHHhccCCCCCeEeEC
Confidence 588888776554 678999999999999 676655443 354 4444433322 22 377773
No 253
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=55.23 E-value=25 Score=25.36 Aligned_cols=52 Identities=10% Similarity=0.209 Sum_probs=38.9
Q ss_pred eEEEEecc---CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 117 IVGIIMES---DSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 117 kVaIIMGS---~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
+|.+++|+ +| -.+++..+.|++.|+++++.-.+..-..+. +. ++++|+.+.-
T Consensus 5 kIll~Cg~G~sTS--~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~----~~-----~~Dvil~~pq 59 (106)
T 1e2b_A 5 HIYLFSSAGMSTS--LLVSKMRAQAEKYEVPVIIEAFPETLAGEK----GQ-----NADVVLLGPQ 59 (106)
T ss_dssp EEEEECSSSTTTH--HHHHHHHHHHHHSCCSEEEEEECSSSTTHH----HH-----HCSEEEECTT
T ss_pred EEEEECCCchhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhh----cc-----CCCEEEEccc
Confidence 68888874 45 578899999999999999888887766654 22 2577776543
No 254
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=55.06 E-value=71 Score=24.70 Aligned_cols=65 Identities=12% Similarity=0.093 Sum_probs=37.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc----------------------CCCChhHHHHHHHHHhh--C
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS----------------------PHQNRKGALSYALSAKE--R 169 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS----------------------AHRtP~~l~eyak~ae~--~ 169 (188)
+..++++|+|..+- +...+++.|-+-|.. +.+++ =-..++.+.+++++..+ .
T Consensus 6 l~~k~vlVTGas~g--IG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 6 LEGKSALITGSARG--IGRAFAEAYVREGAT--VAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTTCEEEEETCSSH--HHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCcH--HHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 44578899998874 455666666666642 22221 11234444555544322 2
Q ss_pred CCeEEEEecCccC
Q 029774 170 GIKIIIVGDGVEA 182 (188)
Q Consensus 170 GvkVIIAvAGmAA 182 (188)
+++++|-.||...
T Consensus 82 ~id~lv~~Ag~~~ 94 (259)
T 4e6p_A 82 GLDILVNNAALFD 94 (259)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 5899999998753
No 255
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=54.80 E-value=67 Score=25.50 Aligned_cols=63 Identities=14% Similarity=0.169 Sum_probs=39.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh------------------------HHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~------------------------~l~eyak~ae~- 168 (188)
++.++++|+|..+ -+...+++.|-+-|. .+-+ ..|+++ .+.++++...+
T Consensus 25 l~~k~vlVTGas~--GIG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 25 LNQRVCIVTGGGS--GIGRATAELFAKNGA--YVVV--ADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4468999999988 456677777777775 2222 234444 44444443322
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 99 ~g~iD~lv~nAg~~~ 113 (277)
T 4dqx_A 99 WGRVDVLVNNAGFGT 113 (277)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 26899999998643
No 256
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=54.66 E-value=76 Score=24.92 Aligned_cols=62 Identities=10% Similarity=0.167 Sum_probs=39.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHH-----------------------HHHHHHHhh--
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGA-----------------------LSYALSAKE-- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l-----------------------~eyak~ae~-- 168 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|+++.+ .+++++..+
T Consensus 7 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (270)
T 1yde_A 7 YAGKVVVVTGGGR--GIGAGIVRAFVNSGA--RVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF 80 (270)
T ss_dssp TTTCEEEEETCSS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567999999987 456677777777774 33333 3554443 333333221
Q ss_pred CCCeEEEEecCcc
Q 029774 169 RGIKIIIVGDGVE 181 (188)
Q Consensus 169 ~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 81 g~iD~lv~nAg~~ 93 (270)
T 1yde_A 81 GRLDCVVNNAGHH 93 (270)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999999864
No 257
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=54.47 E-value=63 Score=25.05 Aligned_cols=28 Identities=25% Similarity=0.100 Sum_probs=18.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 11 l~~k~vlVTGas~--gIG~~ia~~l~~~G~ 38 (267)
T 1iy8_A 11 FTDRVVLITGGGS--GLGRATAVRLAAEGA 38 (267)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 4457888888876 345556666655553
No 258
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=54.28 E-value=70 Score=24.53 Aligned_cols=29 Identities=3% Similarity=0.169 Sum_probs=18.4
Q ss_pred CChhHHHHHHHHHhh--CCCeEEEEecCccC
Q 029774 154 QNRKGALSYALSAKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 154 RtP~~l~eyak~ae~--~GvkVIIAvAGmAA 182 (188)
..++.+.+++++..+ .+++++|-.||...
T Consensus 64 ~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 94 (246)
T 3osu_A 64 ADADEVKAMIKEVVSQFGSLDVLVNNAGITR 94 (246)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 455566666654432 36899999988753
No 259
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=54.04 E-value=65 Score=24.55 Aligned_cols=62 Identities=5% Similarity=-0.041 Sum_probs=41.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------CChhHHHHHHHHHhh----CCCeEEEE
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------QNRKGALSYALSAKE----RGIKIIIV 176 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH---------------RtP~~l~eyak~ae~----~GvkVIIA 176 (188)
.++++|+|..+ -+...+++.|-+-|. ++.+++-. ..++.+.++++...+ .+++++|-
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~ 82 (241)
T 1dhr_A 7 ARRVLVYGGRG--ALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 82 (241)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCc--HHHHHHHHHHHhCCC--EEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 46899999988 567788888888774 44443211 124455566654432 36899999
Q ss_pred ecCcc
Q 029774 177 GDGVE 181 (188)
Q Consensus 177 vAGmA 181 (188)
.||..
T Consensus 83 ~Ag~~ 87 (241)
T 1dhr_A 83 VAGGW 87 (241)
T ss_dssp CCCCC
T ss_pred ccccc
Confidence 99964
No 260
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=54.04 E-value=37 Score=26.21 Aligned_cols=61 Identities=13% Similarity=0.144 Sum_probs=45.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
-+..|.||.=++...++++++...|+..|+..|+-.. |+-+.+-.-+.+++.+++-.+|.+
T Consensus 7 ~P~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~---r~~e~Lg~kIR~a~~~kvPy~lVV 67 (130)
T 1v95_A 7 GPVDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFL---NTEVSLSQALEDVSRGGSPFAIVI 67 (130)
T ss_dssp CCCTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEEC---TTSSCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecC---CCCCcHHHHHHHHHHcCCCEEEEE
Confidence 3446888888899999999999999999998887321 224666666677777777655554
No 261
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=53.99 E-value=37 Score=31.87 Aligned_cols=53 Identities=8% Similarity=0.136 Sum_probs=44.4
Q ss_pred cCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 124 SDSDLPVMNDAARTLSDFGVPYEIKILSP-------------HQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 124 S~SDlpimekA~~vLeefGIpyDVrVaSA-------------HRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
+..|.+.+.+..+-+++.|||+|+-++.. .|-|+ ..+++++.+++|.++++-+
T Consensus 173 ~Y~~~~~v~~v~~~~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPd-p~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 173 GYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPD-FPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp TCCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTT-HHHHHHHHHTTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHhcCCCcceEEEecHHHHhhcccccChhhCCC-HHHHHHHHHHcCceEEeee
Confidence 56688889999999999999999999883 46674 7889999999999887643
No 262
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=53.98 E-value=59 Score=25.84 Aligned_cols=60 Identities=12% Similarity=0.132 Sum_probs=48.6
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhC-CC---e-eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFG-VP---Y-EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefG-Ip---y-DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.| ++ + .++|-+|.=.|--..++++ ...++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 80 (156)
T 3nq4_A 13 ARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAK---SGKYDAVVALG 80 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHH---HCSCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 4799999999998 77889999999999 84 3 4568889888888877765 45688888753
No 263
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=53.92 E-value=23 Score=31.11 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=47.8
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEc-CCC--------ChhHHHHHHHHHhhCCCeEEEEecCccCc
Q 029774 117 IVGIIMESDS----DLPVMNDAARTLSDFGVPYEIKILS-PHQ--------NRKGALSYALSAKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 117 kVaIIMGS~S----DlpimekA~~vLeefGIpyDVrVaS-AHR--------tP~~l~eyak~ae~~GvkVIIAvAGmAAH 183 (188)
+|+||.=|.. |.+..+.+.+.|+++|.... +.. +.+ .-+++.++.+...+..++.|+++-|+-+.
T Consensus 45 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~--~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga 122 (371)
T 3tla_A 45 TIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLV--SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNS 122 (371)
T ss_dssp EEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEE--ECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSCG
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEE--ECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 6999987653 66789999999999998543 221 111 13577778877777889999999998553
No 264
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=53.91 E-value=85 Score=25.27 Aligned_cols=65 Identities=11% Similarity=0.133 Sum_probs=44.0
Q ss_pred eEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEE--cCCCChhHHHHHHHHHhhCCCeEEEEecCcc
Q 029774 117 IVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKIL--SPHQNRKGALSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 117 kVaIIMGS~SD--lpimekA~~vLeefGIpyDVrVa--SAHRtP~~l~eyak~ae~~GvkVIIAvAGmA 181 (188)
+|++|.|.... ..-.+--.+.|++.|.+.++.+. +..-.|+.-.+.++..-++|+++|++.++..
T Consensus 131 ~Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~d~~ 199 (318)
T 2fqx_A 131 AVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGT 199 (318)
T ss_dssp EEEEEESCCSTTTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred EEEEEeCcccHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 89999886432 22344455778888987765543 2334577777777666566899999998864
No 265
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=53.89 E-value=73 Score=25.08 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=19.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+++++++|+|..+- +...+++.|-+-|.
T Consensus 26 l~~k~vlVTGas~g--IG~aia~~la~~G~ 53 (269)
T 4dmm_A 26 LTDRIALVTGASRG--IGRAIALELAAAGA 53 (269)
T ss_dssp TTTCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 44679999998874 45566666666664
No 266
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=53.84 E-value=59 Score=25.52 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=20.8
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
...+.++++|+|..+ -+...+++.|-+-|.
T Consensus 17 ~~l~~k~~lVTGas~--gIG~~ia~~l~~~G~ 46 (267)
T 1vl8_A 17 FDLRGRVALVTGGSR--GLGFGIAQGLAEAGC 46 (267)
T ss_dssp CCCTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 344567999999887 456666666666663
No 267
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=53.74 E-value=49 Score=25.76 Aligned_cols=67 Identities=18% Similarity=0.040 Sum_probs=41.5
Q ss_pred CCCeEEEEeccCC------------CHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC-CCeEEEEecCc
Q 029774 114 DTPIVGIIMESDS------------DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGV 180 (188)
Q Consensus 114 ~~pkVaIIMGS~S------------DlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~-GvkVIIAvAGm 180 (188)
.+++|+||+=|+. |-. ..-....|+++|+......+- -=.++.+.+-++++-++ +++++|.-.|.
T Consensus 14 ~~~rv~IittGde~~~~~~~~G~i~Dsn-~~~L~~~l~~~G~~v~~~~iv-~Dd~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 14 KSLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLV-PDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEE-CSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCCEEEEEEeCcccccccccCCeEeehH-HHHHHHHHHHCCCEEEEEEEe-CCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4578999976642 222 234567889999864333222 23466666666555444 68999988776
Q ss_pred cC
Q 029774 181 EA 182 (188)
Q Consensus 181 AA 182 (188)
+.
T Consensus 92 s~ 93 (178)
T 2pjk_A 92 GY 93 (178)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 268
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=53.69 E-value=43 Score=26.65 Aligned_cols=62 Identities=13% Similarity=0.174 Sum_probs=37.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh------------------------hHHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP------------------------~~l~eyak~ae~- 168 (188)
+++++++|+|..+ -+...+++.|-+-|. .+-+ .-|.+ +.+.++++...+
T Consensus 26 ~~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 26 TGKKIAIVTGAGS--GVGRAVAVALAGAGY--GVAL--AGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp --CCEEEETTTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 3457999999987 455666667766664 2222 23444 444444443322
Q ss_pred -CCCeEEEEecCcc
Q 029774 169 -RGIKIIIVGDGVE 181 (188)
Q Consensus 169 -~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 100 ~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 100 FGRVDVLFNNAGTG 113 (272)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 3689999999975
No 269
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=53.58 E-value=74 Score=24.51 Aligned_cols=27 Identities=22% Similarity=0.178 Sum_probs=17.2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.++++|+|..+ -+...+++.|-+-|.
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (263)
T 3ai3_A 6 SGKVAVITGSSS--GIGLAIAEGFAKEGA 32 (263)
T ss_dssp TTCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 356788888876 345556666655553
No 270
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=53.52 E-value=57 Score=25.49 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029774 125 DSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLP 185 (188)
......++++.+.++..|++++..+...+... ..+++.+++++++.+|.+.-....+.
T Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~---~~i~~~a~~~~~dliV~G~~~~~~~~ 104 (290)
T 3mt0_A 47 RDHSAALNDLAQELREEGYSVSTNQAWKDSLH---QTIIAEQQAEGCGLIIKQHFPDNPLK 104 (290)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHH---HHHHHHHHHHTCSEEEEECCCSCTTS
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHH---HHHHHHHHhcCCCEEEEecccCCchh
Confidence 44567788888888899999988887433333 34445555667888888876555443
No 271
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=53.49 E-value=19 Score=26.77 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHH
Q 029774 129 PVMNDAARTLSDFGVPYEIKILSPHQNRKGAL 160 (188)
Q Consensus 129 pimekA~~vLeefGIpyDVrVaSAHRtP~~l~ 160 (188)
|.+.++.-+|++.||+||..-+.....|+.+.
T Consensus 13 P~~~rvr~~L~e~gi~~e~~~v~~~~~~~~~~ 44 (210)
T 4hoj_A 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLA 44 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHHHH
T ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCHHHH
Confidence 88999999999999999998888666665443
No 272
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=53.14 E-value=34 Score=29.31 Aligned_cols=65 Identities=14% Similarity=0.114 Sum_probs=47.5
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHhCCCeeEEEEc-CCC--------ChhHHHHHHHHHhhCCCeEEEEecCccCc
Q 029774 117 IVGIIMESDS----DLPVMNDAARTLSDFGVPYEIKILS-PHQ--------NRKGALSYALSAKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 117 kVaIIMGS~S----DlpimekA~~vLeefGIpyDVrVaS-AHR--------tP~~l~eyak~ae~~GvkVIIAvAGmAAH 183 (188)
+|+||.=|.. |.+..+.+.+.|+++|.... +.. +.+ .-+++.++.+...+..++.|+++-|+-+.
T Consensus 14 ~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~--~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (331)
T 4e5s_A 14 EIRVISPSCSLSIVSTENRRLAVKRLTELGFHVT--FSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYNS 91 (331)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEE--ECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEE--ECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 6999975544 57889999999999998543 322 111 13577778877777789999999998543
No 273
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=53.07 E-value=47 Score=27.57 Aligned_cols=48 Identities=8% Similarity=-0.057 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcC------CC-ChhHHHHHHHHHhhCCCeEEEE
Q 029774 129 PVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 129 pimekA~~vLeefGIpyDVrVaSA------HR-tP~~l~eyak~ae~~GvkVIIA 176 (188)
+.++++.+.+++.|+..+..+..+ .| .|+.+.++++.+.+-|++.|--
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 178 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSL 178 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 567888899999999877666543 23 5899999999888889875543
No 274
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=53.06 E-value=76 Score=24.64 Aligned_cols=26 Identities=12% Similarity=0.069 Sum_probs=18.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.++++|+|..+ -+...+++.|-+-|.
T Consensus 26 ~k~vlITGas~--gIG~a~a~~l~~~G~ 51 (272)
T 4e3z_A 26 TPVVLVTGGSR--GIGAAVCRLAARQGW 51 (272)
T ss_dssp SCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 46888999887 445666666766664
No 275
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=53.00 E-value=62 Score=23.80 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHHHHh-CCCeeEEEEcCCC-------------------C--hhH--HHHHHHHHhhCCCeEEE
Q 029774 126 SDLPVMNDAARTLSDF-GVPYEIKILSPHQ-------------------N--RKG--ALSYALSAKERGIKIII 175 (188)
Q Consensus 126 SDlpimekA~~vLeef-GIpyDVrVaSAHR-------------------t--P~~--l~eyak~ae~~GvkVII 175 (188)
.+.+.+++..+.++++ |+...+.+.-.|. . +++ +.++.+.+++.|..+.|
T Consensus 107 ~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 107 ADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CSHHHHHHHHHHHHHSSSCCSEEEEEECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 4578888999999999 8633344443332 1 245 78888888888988887
No 276
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=52.94 E-value=13 Score=30.60 Aligned_cols=55 Identities=9% Similarity=0.138 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh-CCCeEEEEecCccCcCcCC
Q 029774 131 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDGVEAHLSGT 187 (188)
Q Consensus 131 mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~-~GvkVIIAvAGmAAHLPGV 187 (188)
+++..+.++.-||+ +.|.|..|++++=.++...... .|..|.-|-.|.|.|..|.
T Consensus 41 l~~m~~aA~~~Gi~--l~v~sGyRS~e~Q~~Ly~~g~s~~G~~vt~A~pg~S~H~~G~ 96 (179)
T 1xp2_A 41 TRNVIKKMAKEGIY--LCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHTTTCC--EEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHcCCe--EEEEEeecCHHHHHHHHHhhcccCCceeeeCCCCCCCcccee
Confidence 44455555667775 8999999999999888765432 3433444555889998763
No 277
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=52.89 E-value=51 Score=28.20 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=47.8
Q ss_pred eEEEEeccCC-CHHHHHHHHHHHHHhCCCeeEEEEcCCC--------ChhHHHHHHHHHhhCCCeEEEEecCccCc
Q 029774 117 IVGIIMESDS-DLPVMNDAARTLSDFGVPYEIKILSPHQ--------NRKGALSYALSAKERGIKIIIVGDGVEAH 183 (188)
Q Consensus 117 kVaIIMGS~S-DlpimekA~~vLeefGIpyDVrVaSAHR--------tP~~l~eyak~ae~~GvkVIIAvAGmAAH 183 (188)
+|+||.=|.. |.+..+.+.+.|+++|....+. -.+.+ .-+++.++.+...+..++.|+++=|+-++
T Consensus 19 ~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 93 (311)
T 1zl0_A 19 RVALIAPASAIATDVLEATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGC 93 (311)
T ss_dssp EEEEECCSBCCCHHHHHHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCG
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCH
Confidence 6999987653 6777899999999999765432 11222 24567777777778889999999998653
No 278
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=52.89 E-value=26 Score=28.91 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=38.0
Q ss_pred HHHHHHhCCCeeEEEEcCCCCh-hHHHHHHHHHhhCCCeEEEEec
Q 029774 135 ARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 135 ~~vLeefGIpyDVrVaSAHRtP-~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|+++|++|-+-..|.+|.. .++.+.++.+.+.|.++++++-
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 122 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP 122 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999999885 5788888889999999999873
No 279
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=52.80 E-value=80 Score=24.66 Aligned_cols=67 Identities=21% Similarity=0.294 Sum_probs=40.6
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------------------------------CC
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-------------------------------------HQ 154 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA-------------------------------------HR 154 (188)
.++..++++|+|..+- +...+++.|-+-|.. +-+++- -.
T Consensus 6 ~~l~~k~~lVTGas~g--IG~a~a~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 6 ADFEGKTALITGGARG--MGRSHAVALAEAGAD--IAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK 81 (281)
T ss_dssp CTTTTCEEEEETTTSH--HHHHHHHHHHHTTCE--EEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCch--HHHHHHHHHHHCCCe--EEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 3455678999998874 556666666666642 322221 13
Q ss_pred ChhHHHHHHHHHhh--CCCeEEEEecCccC
Q 029774 155 NRKGALSYALSAKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 155 tP~~l~eyak~ae~--~GvkVIIAvAGmAA 182 (188)
.++.+.+++++..+ .+++++|-.||...
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 45555666654432 36899999998753
No 280
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=52.76 E-value=81 Score=24.68 Aligned_cols=64 Identities=16% Similarity=0.068 Sum_probs=43.8
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------CCChhHHHHHHHHHhh--CCCeEEEE
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------HQNRKGALSYALSAKE--RGIKIIIV 176 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA----------------HRtP~~l~eyak~ae~--~GvkVIIA 176 (188)
+.++++|+|+.+ -+...+++.|-+-|.. +.+++- -..++.+.+++++..+ .+++++|-
T Consensus 27 ~~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQ--GIGAGLVRAYRDRNYR--VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSS--HHHHHHHHHHHHTTCE--EEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 357999999998 5667778888777753 333321 1346667777765433 36999999
Q ss_pred ecCccC
Q 029774 177 GDGVEA 182 (188)
Q Consensus 177 vAGmAA 182 (188)
.||...
T Consensus 103 nAg~~~ 108 (260)
T 3un1_A 103 NAGVFL 108 (260)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 999753
No 281
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=52.49 E-value=65 Score=24.64 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=37.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhH------------------------HHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKG------------------------ALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~------------------------l~eyak~ae~- 168 (188)
++.++++|+|..+- +...+++.|-+-|. .+.+ ..|+++. +.+++++..+
T Consensus 7 l~~k~vlITGas~g--IG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 7 LEGKVALITGAGSG--FGEGMAKRFAKGGA--KVVI--VDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp TTTCEEEEETTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch--HHHHHHHHHHHCCC--EEEE--EcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 34578999999874 45566666666663 2222 3344444 4444443322
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 81 ~g~id~li~~Ag~~~ 95 (261)
T 3n74_A 81 FGKVDILVNNAGIGH 95 (261)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCccCC
Confidence 26899999998753
No 282
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=52.36 E-value=26 Score=29.84 Aligned_cols=58 Identities=12% Similarity=-0.004 Sum_probs=43.9
Q ss_pred EEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEc---CCCC-hhHHHHHHHHHhhCCCeEEE
Q 029774 118 VGIIMESDSDL--------------PVMNDAARTLSDFGVPYEIKILS---PHQN-RKGALSYALSAKERGIKIII 175 (188)
Q Consensus 118 VaIIMGS~SDl--------------pimekA~~vLeefGIpyDVrVaS---AHRt-P~~l~eyak~ae~~GvkVII 175 (188)
+.-+..+.||. +.++++.+.+++.|....+.+.. +.|. |+.+.++++.+.+-|++.|-
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 187 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIF 187 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEE
Confidence 44457778886 67788888889999987766655 4454 78889999998888987543
No 283
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=52.27 E-value=43 Score=25.89 Aligned_cols=28 Identities=11% Similarity=0.217 Sum_probs=18.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.++++++|+|..+ -+...+++.|-+-|.
T Consensus 10 ~~~k~vlITGas~--GIG~~~a~~L~~~G~ 37 (311)
T 3o26_A 10 TKRRCAVVTGGNK--GIGFEICKQLSSNGI 37 (311)
T ss_dssp --CCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCCcEEEEecCCc--hHHHHHHHHHHHCCC
Confidence 3457899999887 455666666666664
No 284
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=52.25 E-value=80 Score=24.42 Aligned_cols=62 Identities=10% Similarity=0.043 Sum_probs=35.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh------------------------HHHHHHHHHhh--C
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE--R 169 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~------------------------~l~eyak~ae~--~ 169 (188)
+++++|+|..+- +...+++.|-+.|-.+.+ +-..|+++ .+.+++++..+ .
T Consensus 2 gk~~lVTGas~G--IG~aia~~l~~~g~~~~v--~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 2 GKVILVTGVSRG--IGKSIVDVLFSLDKDTVV--YGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CCEEEECSTTSH--HHHHHHHHHHHHCSSCEE--EEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCch--HHHHHHHHHHhcCCCeEE--EEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 467888887763 455566666555532222 22334444 44444443322 3
Q ss_pred CCeEEEEecCcc
Q 029774 170 GIKIIIVGDGVE 181 (188)
Q Consensus 170 GvkVIIAvAGmA 181 (188)
.++++|-.||..
T Consensus 78 ~id~lvnnAg~~ 89 (254)
T 3kzv_A 78 KIDSLVANAGVL 89 (254)
T ss_dssp CCCEEEEECCCC
T ss_pred CccEEEECCccc
Confidence 689999999874
No 285
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=52.24 E-value=79 Score=24.35 Aligned_cols=64 Identities=19% Similarity=0.133 Sum_probs=40.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCChhHHHHHHHHHhh--CC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKE--RG 170 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA----------------------HRtP~~l~eyak~ae~--~G 170 (188)
++++++|+|+.+- +...+++.|-+-|.. +.+++- -..++.+.++++...+ .+
T Consensus 6 ~~k~~lVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 6 KSRVFIVTGASSG--LGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TTCEEEEESTTSH--HHHHHHHHHHHTTCE--EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4579999999984 566777777777753 322221 1234455555554432 36
Q ss_pred CeEEEEecCccC
Q 029774 171 IKIIIVGDGVEA 182 (188)
Q Consensus 171 vkVIIAvAGmAA 182 (188)
++++|-.||...
T Consensus 82 id~lv~nAg~~~ 93 (257)
T 3tpc_A 82 VHGLVNCAGTAP 93 (257)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 899999999753
No 286
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=52.20 E-value=33 Score=26.39 Aligned_cols=40 Identities=10% Similarity=0.016 Sum_probs=32.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN 155 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRt 155 (188)
|+.+|+|+.....+..-+-...++|++-| |++.++|....
T Consensus 1 M~~kV~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~ 40 (205)
T 2ab0_A 1 MSASALVCLAPGSEETEAVTTIDLLVRGG--IKVTTASVASD 40 (205)
T ss_dssp -CCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEECSST
T ss_pred CCcEEEEEEcCCCcHHHHHHHHHHHHHCC--CEEEEEeCCCC
Confidence 34589999998888777777888998887 68899998764
No 287
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=52.17 E-value=84 Score=24.67 Aligned_cols=27 Identities=7% Similarity=0.218 Sum_probs=16.5
Q ss_pred ChhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 155 NRKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 155 tP~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
.++.+.++++...+ .+++++|-.||..
T Consensus 104 d~~~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 104 KKEEISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 34555555544322 3589999999865
No 288
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=52.15 E-value=71 Score=24.55 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=16.6
Q ss_pred ChhHHHHHHHHHhh----CCCe--EEEEecCccC
Q 029774 155 NRKGALSYALSAKE----RGIK--IIIVGDGVEA 182 (188)
Q Consensus 155 tP~~l~eyak~ae~----~Gvk--VIIAvAGmAA 182 (188)
.++.+.++++...+ ..++ ++|-.||...
T Consensus 71 ~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~ 104 (259)
T 1oaa_A 71 TEAGVQRLLSAVRELPRPEGLQRLLLINNAATLG 104 (259)
T ss_dssp SHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCC
T ss_pred CHHHHHHHHHHHHhccccccCCccEEEECCcccC
Confidence 34555555555443 2356 8888888643
No 289
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=52.12 E-value=58 Score=24.94 Aligned_cols=46 Identities=9% Similarity=-0.036 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVII 175 (188)
.+.+.++++.+..+++|+++-+- |=.++.+.++.+.+++.|+++.|
T Consensus 88 ~~~~~~~~~i~~A~~lGa~~v~~----~~~~~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 88 EKSSDWEKMFKFAKAMDLEFITC----EPALSDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp SSTTHHHHHHHHHHHTTCSEEEE----CCCGGGHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHHHHcCCCEEEe----cCCHHHHHHHHHHHHHhCCEEEE
Confidence 45556777777777777764332 22345566666666666665543
No 290
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=52.02 E-value=24 Score=28.24 Aligned_cols=27 Identities=19% Similarity=0.198 Sum_probs=18.3
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
..++++|+|..+ -+...+++.|-+-|.
T Consensus 32 ~gk~~lVTGas~--GIG~aia~~la~~G~ 58 (281)
T 4dry_A 32 EGRIALVTGGGT--GVGRGIAQALSAEGY 58 (281)
T ss_dssp --CEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 457888999887 456666777766664
No 291
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=52.02 E-value=33 Score=25.86 Aligned_cols=60 Identities=5% Similarity=-0.030 Sum_probs=34.0
Q ss_pred EEEEeccCCCH---HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 118 VGIIMESDSDL---PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 118 VaIIMGS~SDl---pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
|++++-+.+|- .+.+.+.+.+++.|. ++.+....-.+++..++++.+..++++.+|....
T Consensus 2 Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~ 64 (276)
T 2h0a_A 2 VSVLLPFVATEFYRRLVEGIEGVLLEQRY--DLALFPILSLARLKRYLENTTLAYLTDGLILASY 64 (276)
T ss_dssp EEEEECCSCCHHHHHHHHHHHHHHGGGTC--EEEECCCCSCCCCC---------CCCSEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecC
Confidence 67777655542 345666777788884 6666666666666666666666677887776543
No 292
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=52.00 E-value=83 Score=24.58 Aligned_cols=28 Identities=18% Similarity=0.062 Sum_probs=18.8
Q ss_pred CChhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 154 QNRKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 154 RtP~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
..++.+.++++...+ .+++++|-.||..
T Consensus 73 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 73 SNEEEVAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp CSHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 456667776655433 3578999888864
No 293
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=51.90 E-value=57 Score=26.29 Aligned_cols=60 Identities=8% Similarity=-0.001 Sum_probs=43.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh-------------C-CCeEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE-------------R-GIKIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~-------------~-GvkVIIAvAGmA 181 (188)
.+.++|.|. . ...+.++..|.+.| .++.|. .|++++..++++.... . +++++|..+|..
T Consensus 119 ~~~vlvlGa-G--g~g~a~a~~L~~~G--~~v~v~--~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 119 NQHVLILGA-G--GATKGVLLPLLQAQ--QNIVLA--NRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp TCEEEEECC-S--HHHHTTHHHHHHTT--CEEEEE--ESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHCC--CEEEEE--ECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCC
Confidence 345677787 3 57888899999999 566664 7999999888865321 2 678999888765
Q ss_pred C
Q 029774 182 A 182 (188)
Q Consensus 182 A 182 (188)
.
T Consensus 192 ~ 192 (272)
T 1p77_A 192 L 192 (272)
T ss_dssp -
T ss_pred C
Confidence 4
No 294
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=51.67 E-value=69 Score=24.78 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=38.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh------------------------hHHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP------------------------~~l~eyak~ae~- 168 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+ ..|.+ +.+.+++++..+
T Consensus 3 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 3 LSGKTVIITGGAR--GLGAEAARQAVAAGA--RVVL--ADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCSEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 4457889999887 456666777766664 2322 23443 344444433322
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 77 ~g~iD~lv~nAg~~~ 91 (254)
T 1hdc_A 77 FGSVDGLVNNAGIST 91 (254)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 26899999998653
No 295
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=51.51 E-value=84 Score=24.46 Aligned_cols=62 Identities=11% Similarity=0.130 Sum_probs=38.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHH------------------------HHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGA------------------------LSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l------------------------~eyak~ae~- 168 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+ ..|.++++ .+.++...+
T Consensus 5 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 5 LTGKVALVSGGAR--GMGASHVRAMVAEGA--KVVF--GDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHH
Confidence 4457899999988 456667777766674 3333 23444433 333433221
Q ss_pred -CCCeEEEEecCcc
Q 029774 169 -RGIKIIIVGDGVE 181 (188)
Q Consensus 169 -~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 79 ~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 79 FGGLHVLVNNAGIL 92 (260)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 2689999999864
No 296
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=51.42 E-value=76 Score=24.59 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=17.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|+.+- +...+++.|-+-|.
T Consensus 24 l~~k~vlVTGas~g--IG~~la~~l~~~G~ 51 (267)
T 4iiu_A 24 AMSRSVLVTGASKG--IGRAIARQLAADGF 51 (267)
T ss_dssp -CCCEEEETTTTSH--HHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 34578888888764 34556666666564
No 297
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=51.25 E-value=80 Score=25.20 Aligned_cols=65 Identities=20% Similarity=0.190 Sum_probs=38.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------------------------CChhHHHHHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------------------------QNRKGALSYALSA 166 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH---------------------------RtP~~l~eyak~a 166 (188)
++.++++|+|..+ -+...+++.|-+-|. .+.+..-. ..++.+.++++..
T Consensus 47 l~~k~vlVTGas~--GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 47 LKDRKALVTGGDS--GIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4568999999987 455666666666664 33333222 2234444444433
Q ss_pred hh--CCCeEEEEecCccC
Q 029774 167 KE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 167 e~--~GvkVIIAvAGmAA 182 (188)
.+ .+++++|-.||...
T Consensus 123 ~~~~g~iD~lv~nAg~~~ 140 (294)
T 3r3s_A 123 REALGGLDILALVAGKQT 140 (294)
T ss_dssp HHHHTCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCcC
Confidence 22 36899999998754
No 298
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=51.17 E-value=79 Score=26.46 Aligned_cols=64 Identities=14% Similarity=0.085 Sum_probs=38.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------------CCCChhHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS--------------------------------PHQNRKGALS 161 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS--------------------------------AHRtP~~l~e 161 (188)
.+.++++|+|..+ -+...++..|-+-|. .|-+++ =-+.++.+.+
T Consensus 43 l~gk~vlVTGas~--GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 43 LAGCTVFITGASR--GIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred CCCCEEEEeCCCh--HHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 3456888888876 345556666666564 222221 1234556666
Q ss_pred HHHHHhh--CCCeEEEEecCcc
Q 029774 162 YALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 162 yak~ae~--~GvkVIIAvAGmA 181 (188)
++++..+ .+++++|-.||..
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 6655543 3689999999864
No 299
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=51.16 E-value=82 Score=24.22 Aligned_cols=65 Identities=5% Similarity=0.005 Sum_probs=43.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC---------------CCChhHHHHHHHHHhh--CCCeEEEE
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP---------------HQNRKGALSYALSAKE--RGIKIIIV 176 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA---------------HRtP~~l~eyak~ae~--~GvkVIIA 176 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.+++++..+ .+++++|-
T Consensus 5 l~~k~vlVTGas~--giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGK--GIGYATALAFVEAGA--KVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3457999999987 566777888877774 3433321 1335667777665432 36899999
Q ss_pred ecCccC
Q 029774 177 GDGVEA 182 (188)
Q Consensus 177 vAGmAA 182 (188)
.||...
T Consensus 81 ~Ag~~~ 86 (250)
T 2fwm_X 81 AAGILR 86 (250)
T ss_dssp CCCCCC
T ss_pred CCCcCC
Confidence 999753
No 300
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=50.80 E-value=74 Score=25.35 Aligned_cols=66 Identities=11% Similarity=0.102 Sum_probs=39.0
Q ss_pred CCeEEEEeccCCCHH------HHHHHHHHHHHhCCC---eeEEEEcCCCChhHHHHHHHHHhh-CCCeEEEEecCccC
Q 029774 115 TPIVGIIMESDSDLP------VMNDAARTLSDFGVP---YEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDGVEA 182 (188)
Q Consensus 115 ~pkVaIIMGS~SDlp------imekA~~vLeefGIp---yDVrVaSAHRtP~~l~eyak~ae~-~GvkVIIAvAGmAA 182 (188)
+++|+||+=|+.=.+ -..-....|+++|+. ....++ --.++.+.+-++++.+ .+++++|.-.|.+.
T Consensus 3 ~~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV--~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~ 78 (195)
T 1di6_A 3 TLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLI--PDEQAIIEQTLCELVDEMSCHLVLTTGGTGP 78 (195)
T ss_dssp CEEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEE--ESCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CCEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 357888875543221 123467788999986 233333 2345566665555544 36899998887753
No 301
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=50.73 E-value=79 Score=24.64 Aligned_cols=28 Identities=4% Similarity=-0.008 Sum_probs=16.6
Q ss_pred CChhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 154 QNRKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 154 RtP~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
..++.+.++++...+ ..++++|-.||..
T Consensus 64 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 64 GQPAKIKEMFQQIDETFGRLDVFVNNAASG 93 (258)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 345555555544322 3578888888854
No 302
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=50.62 E-value=7.2 Score=29.51 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=25.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEE--cC--CCChhHHHHHHH
Q 029774 125 DSDLPVMNDAARTLSDFGVPYEIKIL--SP--HQNRKGALSYAL 164 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpyDVrVa--SA--HRtP~~l~eyak 164 (188)
.||+..+..+.+.|++.||+|++.-. ++ ..+.+++.++..
T Consensus 2 ~~~~~~~t~~~~~L~~~~i~y~~~~~~h~~~~~~~~~e~a~~l~ 45 (166)
T 2dxa_A 2 SSGSSGMTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLG 45 (166)
T ss_dssp ------CCHHHHHHHHTTCCCEEEECCCCTTSCCSSCHHHHHHT
T ss_pred CCCCCchhHHHHHHHHCCCCcEEEEEecCCcccchHHHHHHHcC
Confidence 46788889999999999999998642 22 256666666653
No 303
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=50.57 E-value=73 Score=25.57 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=18.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 32 l~~k~vlVTGas~--gIG~aia~~L~~~G~ 59 (291)
T 3cxt_A 32 LKGKIALVTGASY--GIGFAIASAYAKAGA 59 (291)
T ss_dssp CTTCEEEEETCSS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 3456888888877 445556666666563
No 304
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=50.54 E-value=89 Score=24.47 Aligned_cols=64 Identities=13% Similarity=0.066 Sum_probs=40.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC----------------------CChhHHHHHHHHHhh--C
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH----------------------QNRKGALSYALSAKE--R 169 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH----------------------RtP~~l~eyak~ae~--~ 169 (188)
+..++++|+|..+ -+...+++.|-+-|. .+-+++-. ..++.+.++++...+ .
T Consensus 9 l~~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 9 LENKVAIITGACG--GIGLETSRVLARAGA--RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4467999999988 456677777777774 33333211 223444455544322 3
Q ss_pred CCeEEEEecCcc
Q 029774 170 GIKIIIVGDGVE 181 (188)
Q Consensus 170 GvkVIIAvAGmA 181 (188)
+++++|-.||..
T Consensus 85 ~id~lv~nAg~~ 96 (271)
T 3tzq_B 85 RLDIVDNNAAHS 96 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999999975
No 305
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=50.38 E-value=89 Score=24.44 Aligned_cols=63 Identities=14% Similarity=0.142 Sum_probs=43.4
Q ss_pred eEEEEeccCCC-----HHHHHHHHHHHHHh-------CCCeeEEEEcCCCChhHHHHHHHHHh-hCCCeEEEEecC
Q 029774 117 IVGIIMESDSD-----LPVMNDAARTLSDF-------GVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVGDG 179 (188)
Q Consensus 117 kVaIIMGS~SD-----lpimekA~~vLeef-------GIpyDVrVaSAHRtP~~l~eyak~ae-~~GvkVIIAvAG 179 (188)
+|+++.-.... .++.+.+...+++. |.++++.+....-.|+...+.++..- +++++.+|...+
T Consensus 6 ~IG~i~p~sg~~~~~~~~~~~g~~~a~~~~n~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~ 81 (358)
T 3hut_A 6 LLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFS 81 (358)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECSS
T ss_pred EEEEEeccCCchhhcCHHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCCC
Confidence 57777754433 23444455555554 56789999999999999888887765 677888886443
No 306
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=50.34 E-value=81 Score=23.93 Aligned_cols=65 Identities=17% Similarity=0.155 Sum_probs=38.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC----------------------CCChhHHHHHHHHHhh--C
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP----------------------HQNRKGALSYALSAKE--R 169 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA----------------------HRtP~~l~eyak~ae~--~ 169 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- ...++.+.++++...+ .
T Consensus 10 ~~~k~vlVTGasg--giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 10 VKGLVAVITGGAS--GLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG 85 (265)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCC--hHHHHHHHHHHHCCC--EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4457889999887 456666777766664 3333221 1223445555544322 3
Q ss_pred CCeEEEEecCccC
Q 029774 170 GIKIIIVGDGVEA 182 (188)
Q Consensus 170 GvkVIIAvAGmAA 182 (188)
+++++|-.||...
T Consensus 86 ~id~li~~Ag~~~ 98 (265)
T 2o23_A 86 RVDVAVNCAGIAV 98 (265)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 6899999999753
No 307
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.25 E-value=31 Score=24.28 Aligned_cols=45 Identities=11% Similarity=0.126 Sum_probs=31.0
Q ss_pred eEEEEeccCCCHHHHH------HHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHH
Q 029774 117 IVGIIMESDSDLPVMN------DAARTLSDFGVPYEIKILSPHQNRKGALSYALS 165 (188)
Q Consensus 117 kVaIIMGS~SDlpime------kA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ 165 (188)
+|.|.+- +.=+.++ +|...|++.||+|+..=+.. .|+...++.+.
T Consensus 9 ~V~vy~~--~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~--~~~~~~~l~~~ 59 (111)
T 2ct6_A 9 VIRVFIA--SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKN 59 (111)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT--CHHHHHHHHHS
T ss_pred EEEEEEc--CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHH
Confidence 4666654 4445667 89999999999998766665 46555555543
No 308
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=50.23 E-value=89 Score=24.41 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=42.4
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------CCChhHHHHHHHHHhh--CCCeEEEEe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------HQNRKGALSYALSAKE--RGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA--------------HRtP~~l~eyak~ae~--~GvkVIIAv 177 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+.+- -..++.+.++++...+ ..++++|-.
T Consensus 19 l~~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n 94 (253)
T 2nm0_A 19 HMSRSVLVTGGNR--GIGLAIARAFADAGD--KVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN 94 (253)
T ss_dssp -CCCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4467999999998 467778888887784 4433321 1235566666655432 347999999
Q ss_pred cCcc
Q 029774 178 DGVE 181 (188)
Q Consensus 178 AGmA 181 (188)
||..
T Consensus 95 Ag~~ 98 (253)
T 2nm0_A 95 AGVT 98 (253)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 9975
No 309
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=50.19 E-value=44 Score=20.82 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=32.7
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEE
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKII 174 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVI 174 (188)
+.=+.++++...|++.|++|+..-+. ..++...++.+.....++-++
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~~~~~~vP~l 55 (82)
T 1fov_A 9 ETCPYCHRAKALLSSKGVSFQELPID--GNAAKREEMIKRSGRTTVPQI 55 (82)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHHHSSCCSCEE
T ss_pred CCChhHHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHHHhCCCCcCEE
Confidence 34489999999999999998766554 356666667655444455443
No 310
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=49.86 E-value=89 Score=24.62 Aligned_cols=62 Identities=16% Similarity=0.218 Sum_probs=36.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------CCCChhHHHHHHHHHhh-
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS--------------------------PHQNRKGALSYALSAKE- 168 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS--------------------------AHRtP~~l~eyak~ae~- 168 (188)
.++++|+|..+ -+...++..|-+-|.. +-+.. =-..++.+.++++...+
T Consensus 27 ~k~~lVTGas~--GIG~aia~~la~~G~~--Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 27 NKVAIVTGASR--GIGAAIAARLASDGFT--VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp CCEEEEESCSS--HHHHHHHHHHHHHTCE--EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 57899999888 4556666666666643 22221 11234455555544432
Q ss_pred -CCCeEEEEecCcc
Q 029774 169 -RGIKIIIVGDGVE 181 (188)
Q Consensus 169 -~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 103 ~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 103 FGGVDVLVNNAGIM 116 (267)
T ss_dssp HSCEEEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 3578888888864
No 311
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=49.72 E-value=80 Score=23.71 Aligned_cols=24 Identities=21% Similarity=0.066 Sum_probs=15.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFG 142 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefG 142 (188)
++++|+|..+ -+....++.|-+-|
T Consensus 3 k~vlItGasg--giG~~~a~~l~~~G 26 (250)
T 2cfc_A 3 RVAIVTGASS--GNGLAIATRFLARG 26 (250)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHTT
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCC
Confidence 5677777776 44555666666666
No 312
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=49.70 E-value=62 Score=25.68 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=30.8
Q ss_pred HHHHHHhCCCeeEEEEcCCCCh-hHHHHHHHHHhhCCCeEEEEecC
Q 029774 135 ARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 135 ~~vLeefGIpyDVrVaSAHRtP-~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+.+.++|+++-+-..|=+|.| +++.++++.+.+.|.++++.+.-
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~ 120 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNN 120 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4667777776544423333564 57888888888889999988854
No 313
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=49.38 E-value=38 Score=25.56 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=42.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-----CCChhHHHHHHHHHhhCCCeEEEEecCcc
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-----HQNRKGALSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA-----HRtP~~l~eyak~ae~~GvkVIIAvAGmA 181 (188)
+++++++|+|..+ -+...+++.|.+-|. .+.+.+- -..++.+.++++.. .+++++|-.||..
T Consensus 4 ~~~k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~D~~~~~~v~~~~~~~--g~id~lv~nAg~~ 70 (223)
T 3uce_A 4 SDKTVYVVLGGTS--GIGAELAKQLESEHT--IVHVASRQTGLDISDEKSVYHYFETI--GAFDHLIVTAGSY 70 (223)
T ss_dssp -CCEEEEEETTTS--HHHHHHHHHHCSTTE--EEEEESGGGTCCTTCHHHHHHHHHHH--CSEEEEEECCCCC
T ss_pred CCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEecCCcccCCCCHHHHHHHHHHh--CCCCEEEECCCCC
Confidence 3468999999998 456777777766653 4444432 13466777777644 4589999999975
No 314
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=49.38 E-value=70 Score=24.70 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=19.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+.++++|+|..+ -+...+++.|-+-|.
T Consensus 10 l~~k~vlVTGas~--gIG~aia~~l~~~G~ 37 (252)
T 3f1l_A 10 LNDRIILVTGASD--GIGREAAMTYARYGA 37 (252)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 4567999999887 455666666666664
No 315
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=49.32 E-value=60 Score=25.27 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=38.0
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------------------CCChhHHHHHHHHH
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------------------HQNRKGALSYALSA 166 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA--------------------------HRtP~~l~eyak~a 166 (188)
.++.++++|+|..+- +...+++.|-+-|.. +-++.. -..++.+.++++..
T Consensus 22 ~~~~k~vlITGas~g--IG~~~a~~l~~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGG--LGAAISRRLHDAGMA--VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV 97 (269)
T ss_dssp --CCCEEEETTTTSH--HHHHHHHHHHTTTCE--EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCch--HHHHHHHHHHHCCCE--EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 345679999998874 456666667666643 322221 12344445555443
Q ss_pred hh--CCCeEEEEecCccC
Q 029774 167 KE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 167 e~--~GvkVIIAvAGmAA 182 (188)
.+ .+++++|-.||...
T Consensus 98 ~~~~g~id~li~nAg~~~ 115 (269)
T 3gk3_A 98 LADFGKVDVLINNAGITR 115 (269)
T ss_dssp HHHHSCCSEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 32 25889999888753
No 316
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=49.19 E-value=63 Score=25.03 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=17.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
|+.++++|+|..+ -+...++..|-+-|.
T Consensus 9 ~~~k~~lVTGas~--gIG~~ia~~l~~~G~ 36 (276)
T 1mxh_A 9 SECPAAVITGGAR--RIGHSIAVRLHQQGF 36 (276)
T ss_dssp --CCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 4456788888776 355566666666663
No 317
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=49.09 E-value=93 Score=24.29 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=19.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+..++++|+|..+ -+...++..|-+-|.
T Consensus 9 l~~k~~lVTGas~--GIG~a~a~~la~~G~ 36 (277)
T 3tsc_A 9 LEGRVAFITGAAR--GQGRAHAVRMAAEGA 36 (277)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCcc--HHHHHHHHHHHHcCC
Confidence 4457888999887 445666666666664
No 318
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=49.06 E-value=31 Score=28.28 Aligned_cols=49 Identities=6% Similarity=-0.033 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcC------CC-ChhHHHHHHHHHhhCCCeEEE
Q 029774 127 DLPVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 127 DlpimekA~~vLeefGIpyDVrVaSA------HR-tP~~l~eyak~ae~~GvkVII 175 (188)
+++.++++.+.+++.|++.+..|... .| +|+.+.++++.+.+-|++.|-
T Consensus 118 ~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 118 SIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 66777888889999999887666543 34 589999999888777886543
No 319
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=48.91 E-value=76 Score=25.61 Aligned_cols=45 Identities=7% Similarity=0.061 Sum_probs=28.7
Q ss_pred CCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHH
Q 029774 112 KNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 162 (188)
Q Consensus 112 ~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ey 162 (188)
.++..++++|+|+.+ -+...+++.|-+-|. .+.++ -|.++++.+.
T Consensus 37 ~~l~~k~vlVTGas~--GIG~aia~~la~~G~--~V~~~--~r~~~~~~~~ 81 (293)
T 3rih_A 37 FDLSARSVLVTGGTK--GIGRGIATVFARAGA--NVAVA--ARSPRELSSV 81 (293)
T ss_dssp TCCTTCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEE--ESSGGGGHHH
T ss_pred cCCCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHH
Confidence 344568999999998 456777777777775 33333 3554444433
No 320
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=48.89 E-value=44 Score=27.24 Aligned_cols=29 Identities=17% Similarity=-0.028 Sum_probs=23.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVP 144 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIp 144 (188)
.+|++|+|..++--+...++..|-+-|..
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~ 30 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK 30 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCE
Confidence 47999999888777788888888888853
No 321
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=48.84 E-value=55 Score=25.72 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=39.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC------------------------CCChhHHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP------------------------HQNRKGALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA------------------------HRtP~~l~eyak~ae~- 168 (188)
++.++++|+|..|.--+...++..|-+-|. +|.+++- -..++.+.++++...+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA--QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 445789999988433466777777777774 3333321 1123344444443322
Q ss_pred -CCCeEEEEecCccC
Q 029774 169 -RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 -~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 97 ~g~iD~lv~~Ag~~~ 111 (285)
T 2p91_A 97 WGSLDIIVHSIAYAP 111 (285)
T ss_dssp TSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 36899999999753
No 322
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=48.82 E-value=77 Score=23.80 Aligned_cols=24 Identities=25% Similarity=0.321 Sum_probs=15.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFG 142 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefG 142 (188)
++++|+|..+- +....++.|-+-|
T Consensus 3 k~vlITGas~g--IG~~ia~~l~~~G 26 (235)
T 3l77_A 3 KVAVITGASRG--IGEAIARALARDG 26 (235)
T ss_dssp CEEEEESCSSH--HHHHHHHHHHHTT
T ss_pred CEEEEECCCcH--HHHHHHHHHHHCC
Confidence 57777777763 4555556665555
No 323
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=48.79 E-value=95 Score=24.30 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=17.0
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.++++|+|..+- +...+++.|-+-|.
T Consensus 10 ~~k~vlVTGas~g--IG~aia~~l~~~G~ 36 (281)
T 3svt_A 10 QDRTYLVTGGGSG--IGKGVAAGLVAAGA 36 (281)
T ss_dssp TTCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 4568888888763 44555555655553
No 324
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=48.53 E-value=49 Score=32.42 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEc-------------CCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 125 DSDLPVMNDAARTLSDFGVPYEIKILS-------------PHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpyDVrVaS-------------AHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
..|.+.+++..+-+++.|||+|+.++- ..|-|+ ..+++++.++.|.++++-+
T Consensus 301 Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPd-p~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 301 YGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKG-FPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTT-HHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCceEEEccchhcCCCceeeChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 457888999999999999999999974 246675 7889999999999888743
No 325
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=48.25 E-value=35 Score=27.13 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=44.6
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCC---eeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVP---YEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIp---yDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.|++ ..++|-+|-=.|--..++++ ...++.+||..
T Consensus 14 ~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 79 (156)
T 1c2y_A 14 FRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGK---SGKYHAIVCLG 79 (156)
T ss_dssp CCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHH---TTCCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 4799999999888 7788999999999985 23456566656655555543 45689998853
No 326
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=48.17 E-value=87 Score=24.14 Aligned_cols=25 Identities=24% Similarity=0.206 Sum_probs=14.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFG 142 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefG 142 (188)
.++++|+|..+ -+...+++.|-+-|
T Consensus 4 ~k~vlVTGas~--gIG~~ia~~l~~~G 28 (260)
T 1x1t_A 4 GKVAVVTGSTS--GIGLGIATALAAQG 28 (260)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHcC
Confidence 45677777766 34555555555555
No 327
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=48.16 E-value=87 Score=24.10 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=15.4
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
++.+.++++...+ .+++++|-.||..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 92 (258)
T 3a28_C 65 KANFDSAIDEAAEKLGGFDVLVNNAGIA 92 (258)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4444444443322 2588999988864
No 328
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=48.13 E-value=49 Score=24.99 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=37.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEE-cCC--------------------CChhHHHHHHHHHhhCCCeEEEEe
Q 029774 125 DSDLPVMNDAARTLSDFGVPYEIKIL-SPH--------------------QNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpyDVrVa-SAH--------------------RtP~~l~eyak~ae~~GvkVIIAv 177 (188)
..|.+.+++..+.++++|+. -|||- +.+ ..-+.+.++++.+++.|+.|++..
T Consensus 38 ~~~~~~~~~~l~~~k~~G~N-~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 38 QRNKNRIEPEFKKLHDAGGN-SMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-EEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCc-EEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 34677889999999999998 45651 111 123556778888899999999875
No 329
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=48.11 E-value=84 Score=24.19 Aligned_cols=62 Identities=16% Similarity=0.190 Sum_probs=38.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh------------------------hHHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP------------------------~~l~eyak~ae~- 168 (188)
++.++++|+|..+ -+...++..|-+-|. ++.++ .|.+ +.+.++++...+
T Consensus 10 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 10 LSGRKAIVTGGSK--GIGAAIARALDKAGA--TVAIA--DLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 3457899999987 456677777777774 33332 3443 334444433221
Q ss_pred -CCCeEEEEecCcc
Q 029774 169 -RGIKIIIVGDGVE 181 (188)
Q Consensus 169 -~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 84 ~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 84 LGGFDLLCANAGVS 97 (263)
T ss_dssp HTCCCEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 2689999999864
No 330
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=48.01 E-value=75 Score=24.82 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=18.1
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
...++++|+|..+- +...+++.|-+-|.
T Consensus 18 l~~k~vlVTGas~g--IG~aia~~l~~~G~ 45 (266)
T 4egf_A 18 LDGKRALITGATKG--IGADIARAFAAAGA 45 (266)
T ss_dssp CTTCEEEETTTTSH--HHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 34578888888874 45556666655554
No 331
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=47.92 E-value=92 Score=24.60 Aligned_cols=43 Identities=9% Similarity=0.088 Sum_probs=27.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 162 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ey 162 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+ .-|.++.+.+.
T Consensus 27 l~~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~--~~r~~~~~~~~ 69 (276)
T 2b4q_A 27 LAGRIALVTGGSR--GIGQMIAQGLLEAGA--RVFI--CARDAEACADT 69 (276)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--ECSCHHHHHHH
T ss_pred CCCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHH
Confidence 4467999999987 566777777777774 3333 34665554433
No 332
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=47.70 E-value=97 Score=24.12 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=20.2
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+++.++++|+|..+ -+....++.|-+-|.
T Consensus 23 ~l~~k~vlITGasg--giG~~la~~L~~~G~ 51 (302)
T 1w6u_A 23 SFQGKVAFITGGGT--GLGKGMTTLLSSLGA 51 (302)
T ss_dssp TTTTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 35567899999887 456666666666663
No 333
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=47.61 E-value=44 Score=25.85 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=24.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-----ChhHHHHHHHHH
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ-----NRKGALSYALSA 166 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHR-----tP~~l~eyak~a 166 (188)
.|.+..|.....+.++++.+.+++.||..-+. .|. +++.+.++++..
T Consensus 100 ~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~lE---n~~~~~~~~~~~~~~ll~~v 151 (264)
T 1yx1_A 100 WLKVSLGLLPEQPDLAALGRRLARHGLQLLVE---NDQTPQGGRIEVLERFFRLA 151 (264)
T ss_dssp EEEEEEECCCSSCCHHHHHHHHTTSSCEEEEE---CCSSHHHHCHHHHHHHHHHH
T ss_pred EEEEecCCCCcHHHHHHHHHHHHhcCCEEEEe---cCCCCCCCCHHHHHHHHHHH
Confidence 45555555443335566666666666643332 232 345555555554
No 334
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=47.45 E-value=74 Score=25.02 Aligned_cols=28 Identities=11% Similarity=0.089 Sum_probs=19.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 21 l~~k~~lVTGas~--gIG~aia~~L~~~G~ 48 (288)
T 2x9g_A 21 MEAPAAVVTGAAK--RIGRAIAVKLHQTGY 48 (288)
T ss_dssp -CCCEEEETTCSS--HHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 4567999999987 456667777766664
No 335
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.33 E-value=72 Score=24.73 Aligned_cols=41 Identities=17% Similarity=0.123 Sum_probs=24.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGAL 160 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ 160 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|+++++.
T Consensus 4 ~~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~ 44 (278)
T 1spx_A 4 FAEKVAIITGSSN--GIGRATAVLFAREGA--KVTIT--GRHAERLE 44 (278)
T ss_dssp TTTCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHH
T ss_pred CCCCEEEEeCCCc--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHH
Confidence 4457888888887 456667777766664 33332 35554443
No 336
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=47.28 E-value=73 Score=26.38 Aligned_cols=63 Identities=11% Similarity=0.161 Sum_probs=39.6
Q ss_pred CCCCCCeEEEEeccCCCHH---HHHHHHHHH----HHhCCCeeEEEEcCCCChhHH--------------HHHHHHHhhC
Q 029774 111 GKNDTPIVGIIMESDSDLP---VMNDAARTL----SDFGVPYEIKILSPHQNRKGA--------------LSYALSAKER 169 (188)
Q Consensus 111 ~~~~~pkVaIIMGS~SDlp---imekA~~vL----eefGIpyDVrVaSAHRtP~~l--------------~eyak~ae~~ 169 (188)
...|++.++|| |+-+=+. +++++.+.. +...+|| .+.|.-.-|++. .+.++..++.
T Consensus 22 ~~~m~k~IGii-GGmg~~aT~~~~~~i~~~~~~~~D~~h~p~--~~~s~~~i~~r~~~~~~~g~~~~~~l~~~~~~L~~~ 98 (268)
T 3s81_A 22 SNAMKHTIGIL-GGMGPAATADMLEKFVELRHASCDQQHIPL--IVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDA 98 (268)
T ss_dssp ---CCCCEEEE-CCSSHHHHHHHHHHHHHHSCCSSGGGSCCE--EEEECTTSCCHHHHHHHCCCCSHHHHHHHHHHHHHT
T ss_pred ccCCCCcEEEE-ecCCHHHHHHHHHHHHHhhHhhcCCCCCCE--EEeccCCHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 34467789999 7777665 555555543 2345564 566655566666 7777888888
Q ss_pred CCeEEEE
Q 029774 170 GIKIIIV 176 (188)
Q Consensus 170 GvkVIIA 176 (188)
|++.||.
T Consensus 99 Gad~IVI 105 (268)
T 3s81_A 99 GAECIVI 105 (268)
T ss_dssp TCSEEEC
T ss_pred CCCEEEE
Confidence 9986543
No 337
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=47.26 E-value=43 Score=25.46 Aligned_cols=42 Identities=7% Similarity=0.196 Sum_probs=32.2
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 156 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP 156 (188)
.++.+|+|+.....+..-+-...+.|++.| |++.++|.+..|
T Consensus 21 ~~~~kV~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 62 (193)
T 1oi4_A 21 GLSKKIAVLITDEFEDSEFTSPADEFRKAG--HEVITIEKQAGK 62 (193)
T ss_dssp TCCCEEEEECCTTBCTHHHHHHHHHHHHTT--CEEEEEESSTTC
T ss_pred ccCCEEEEEECCCCCHHHHHHHHHHHHHCC--CEEEEEECCCCc
Confidence 345689999987766666666788888876 689999988765
No 338
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=47.24 E-value=87 Score=23.42 Aligned_cols=37 Identities=11% Similarity=0.107 Sum_probs=23.6
Q ss_pred CeEEEEeccCCC------HHHHHHHHHHHHHhCCCeeEEEEcC
Q 029774 116 PIVGIIMESDSD------LPVMNDAARTLSDFGVPYEIKILSP 152 (188)
Q Consensus 116 pkVaIIMGS~SD------lpimekA~~vLeefGIpyDVrVaSA 152 (188)
++|.||.||..- ...++.+.+.|++-|-..++.++..
T Consensus 2 ~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 2 SKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 379999999872 2335667777777772234444433
No 339
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.86 E-value=96 Score=23.82 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=36.4
Q ss_pred CCCCeEEEEeccC-CCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------CCCChhHHHHHHHH
Q 029774 113 NDTPIVGIIMESD-SDLPVMNDAARTLSDFGVPYEIKILS--------------------------PHQNRKGALSYALS 165 (188)
Q Consensus 113 ~~~pkVaIIMGS~-SDlpimekA~~vLeefGIpyDVrVaS--------------------------AHRtP~~l~eyak~ 165 (188)
.+++++++|+|.. +.+ ....++.|-+-|. .+-+++ =-..++.+.+++++
T Consensus 19 ~l~~k~vlITGasg~GI--G~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGI--GSTTARRALLEGA--DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTTTCEEEESSCSSSSH--HHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCch--HHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 3456799999986 443 3444445544453 222211 12345555555554
Q ss_pred Hhh--CCCeEEEEecCccC
Q 029774 166 AKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 166 ae~--~GvkVIIAvAGmAA 182 (188)
..+ ..++++|-.||...
T Consensus 95 ~~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHHSCCCEEEECCCCCC
T ss_pred HHHHhCCCcEEEECCCcCC
Confidence 432 25789999888643
No 340
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=46.78 E-value=1e+02 Score=25.43 Aligned_cols=62 Identities=13% Similarity=0.187 Sum_probs=44.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh-------------CCCeEEEEe--cCc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE-------------RGIKIIIVG--DGV 180 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~-------------~GvkVIIAv--AGm 180 (188)
.+.++|.|.- ...+.+...|.+.|+. ++.| +-|++++..++++.... .+++++|.. +||
T Consensus 120 ~k~~lvlGaG---g~~~aia~~L~~~G~~-~v~i--~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm 193 (272)
T 3pwz_A 120 NRRVLLLGAG---GAVRGALLPFLQAGPS-ELVI--ANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASL 193 (272)
T ss_dssp TSEEEEECCS---HHHHHHHHHHHHTCCS-EEEE--ECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGG
T ss_pred CCEEEEECcc---HHHHHHHHHHHHcCCC-EEEE--EeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCC
Confidence 3566677874 7888899999999974 4455 46999999998876431 568899876 455
Q ss_pred cCc
Q 029774 181 EAH 183 (188)
Q Consensus 181 AAH 183 (188)
...
T Consensus 194 ~~~ 196 (272)
T 3pwz_A 194 TAD 196 (272)
T ss_dssp GTC
T ss_pred CCC
Confidence 433
No 341
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=46.69 E-value=87 Score=23.23 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=41.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC-------------CChhHHHHHHHHHh-hCCCeEEEEecCcc
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH-------------QNRKGALSYALSAK-ERGIKIIIVGDGVE 181 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH-------------RtP~~l~eyak~ae-~~GvkVIIAvAGmA 181 (188)
.++++|+|..+ -+....++.|-+-|. ++.+++-. ..++.+.+++++.+ ..+++++|-.||..
T Consensus 2 ~k~vlVtGasg--giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~ 77 (242)
T 1uay_A 2 ERSALVTGGAS--GLGRAAALALKARGY--RVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVG 77 (242)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHHTC--EEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccccc
Confidence 36889999987 556777777777774 44444321 33566777776542 23689999999864
No 342
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=46.59 E-value=72 Score=25.92 Aligned_cols=35 Identities=11% Similarity=-0.048 Sum_probs=18.4
Q ss_pred CCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 142 GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 142 GIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
++|.-+++. +.-+++.+.++++.+++.|++.|++.
T Consensus 158 ~~Pv~vKi~-~~~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 158 TKPLGVKLP-PYFDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CSCEEEEEC-CCCSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCCEEEEEC-CCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 555555542 33344555555666666666655553
No 343
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=46.43 E-value=93 Score=23.72 Aligned_cols=26 Identities=15% Similarity=0.055 Sum_probs=16.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.++++|+|+.+ -+...+++.|-+-|.
T Consensus 5 ~k~vlVtGas~--gIG~~~a~~l~~~G~ 30 (254)
T 1sby_A 5 NKNVIFVAALG--GIGLDTSRELVKRNL 30 (254)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTCC
T ss_pred CcEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 45667777765 556666666666664
No 344
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=46.36 E-value=98 Score=23.77 Aligned_cols=67 Identities=16% Similarity=0.011 Sum_probs=39.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc--------------------------CCCChhHHHHHHHHHh
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS--------------------------PHQNRKGALSYALSAK 167 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS--------------------------AHRtP~~l~eyak~ae 167 (188)
++.++++|+|..+.--+...+++.|-+-|.. +-+.+ =-..++.+.+++++..
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 3457888888875534455556666555542 22221 1234566666665543
Q ss_pred h--CCCeEEEEecCccC
Q 029774 168 E--RGIKIIIVGDGVEA 182 (188)
Q Consensus 168 ~--~GvkVIIAvAGmAA 182 (188)
+ ..++++|-.||...
T Consensus 83 ~~~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFAN 99 (266)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHhCCeeEEEEcccccc
Confidence 3 35899999998754
No 345
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=46.34 E-value=99 Score=23.82 Aligned_cols=65 Identities=6% Similarity=0.110 Sum_probs=39.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC-------------------CChhHHHHHHHHHh--hCCCe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH-------------------QNRKGALSYALSAK--ERGIK 172 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH-------------------RtP~~l~eyak~ae--~~Gvk 172 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+++-. ..++.+.++++... -.+++
T Consensus 4 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 79 (256)
T 2d1y_A 4 FAGKGVLVTGGAR--GIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVD 79 (256)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 4457889999887 556677777777774 44333211 12333444444332 23689
Q ss_pred EEEEecCccC
Q 029774 173 IIIVGDGVEA 182 (188)
Q Consensus 173 VIIAvAGmAA 182 (188)
++|-.||...
T Consensus 80 ~lv~~Ag~~~ 89 (256)
T 2d1y_A 80 VLVNNAAIAA 89 (256)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 9999999753
No 346
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.12 E-value=96 Score=24.86 Aligned_cols=42 Identities=19% Similarity=0.126 Sum_probs=25.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALS 161 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~e 161 (188)
++.++++|+|..+ -+...+++.|-+-|. +|.+ .-|+++++.+
T Consensus 24 l~~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~--~~r~~~~~~~ 65 (297)
T 1xhl_A 24 FSGKSVIITGSSN--GIGRSAAVIFAKEGA--QVTI--TGRNEDRLEE 65 (297)
T ss_dssp CTTCEEEETTCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 3457899999887 456667777766664 3332 3455554443
No 347
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=45.97 E-value=79 Score=23.98 Aligned_cols=64 Identities=17% Similarity=0.285 Sum_probs=39.1
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH---------------------hh-CC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA---------------------KE-RG 170 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a---------------------e~-~G 170 (188)
....+..+|+|..+- +....++.|-+-|. . |+-.-|+++++.+..+.. ++ .+
T Consensus 11 ~~~~k~vlVTGas~g--IG~~~a~~l~~~G~--~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (249)
T 3f9i_A 11 DLTGKTSLITGASSG--IGSAIARLLHKLGS--K--VIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSN 84 (249)
T ss_dssp CCTTCEEEETTTTSH--HHHHHHHHHHHTTC--E--EEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSC
T ss_pred cCCCCEEEEECCCCh--HHHHHHHHHHHCCC--E--EEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCC
Confidence 344578999999884 56677777777774 3 333446666655543321 11 25
Q ss_pred CeEEEEecCccC
Q 029774 171 IKIIIVGDGVEA 182 (188)
Q Consensus 171 vkVIIAvAGmAA 182 (188)
++++|-.||...
T Consensus 85 id~li~~Ag~~~ 96 (249)
T 3f9i_A 85 LDILVCNAGITS 96 (249)
T ss_dssp CSEEEECCC---
T ss_pred CCEEEECCCCCC
Confidence 789998888643
No 348
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=45.97 E-value=49 Score=28.20 Aligned_cols=51 Identities=14% Similarity=0.322 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 126 SDLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpy------------------DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
-|+.-+.+-.+-|+++||.. +. .|-+..=+++++.++++++.++|++||+=
T Consensus 20 Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 89 (441)
T 1lwj_A 20 GDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLD 89 (441)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 58888877789999999951 22 34444457899999999999999999873
No 349
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=45.80 E-value=1.1e+02 Score=23.96 Aligned_cols=29 Identities=17% Similarity=0.157 Sum_probs=18.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
.+..++++|+|..+ -+...+++.|-+-|.
T Consensus 15 ~l~~k~~lVTGas~--gIG~aia~~l~~~G~ 43 (270)
T 3is3_A 15 RLDGKVALVTGSGR--GIGAAVAVHLGRLGA 43 (270)
T ss_dssp CCTTCEEEESCTTS--HHHHHHHHHHHHTTC
T ss_pred CcCCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 34457888888877 345556666666564
No 350
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=45.49 E-value=17 Score=29.77 Aligned_cols=66 Identities=15% Similarity=0.041 Sum_probs=40.8
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH-hhCCCeEEEEecCccCc
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA-KERGIKIIIVGDGVEAH 183 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a-e~~GvkVIIAvAGmAAH 183 (188)
+++..+.++.+...- .+.+.+++++++...++.|+.. ..++..+.++.. +++|++|||+--|.++.
T Consensus 10 ~~m~~ii~i~~~~~L---~~~~~~i~~e~~~~~~I~vi~~--~le~av~~a~~~~~~~~~dVIISRGgta~~ 76 (225)
T 2pju_A 10 NDDKPVIWTVSVTRL---FELFRDISLEFDHLANITPIQL--GFEKAVTYIRKKLANERCDAIIAAGSNGAY 76 (225)
T ss_dssp ---CCEEEEECCHHH---HHHHHHHHTTTTTTCEEEEECC--CHHHHHHHHHHHTTTSCCSEEEEEHHHHHH
T ss_pred ccCCCEEEEEchHHH---HHHHHHHHHhhCCCceEEEecC--cHHHHHHHHHHHHhcCCCeEEEeCChHHHH
Confidence 334456666654433 3355566678887778887653 366677766554 44579999997776543
No 351
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=45.45 E-value=60 Score=25.54 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=39.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC--------------------CChhHHHHHHHHHhh--CCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH--------------------QNRKGALSYALSAKE--RGI 171 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH--------------------RtP~~l~eyak~ae~--~Gv 171 (188)
++.++++|+|..+- +...+++.|-+-|.. |-+++-. ..++.+.++++...+ .++
T Consensus 25 l~~k~vlVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 25 LSSAPILITGASQR--VGLHCALRLLEHGHR--VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp --CCCEEESSTTSH--HHHHHHHHHHHTTCC--EEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34578999999874 567777777777753 3333211 123444555544432 358
Q ss_pred eEEEEecCcc
Q 029774 172 KIIIVGDGVE 181 (188)
Q Consensus 172 kVIIAvAGmA 181 (188)
+++|-.||..
T Consensus 101 D~lv~nAg~~ 110 (260)
T 3gem_A 101 RAVVHNASEW 110 (260)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcc
Confidence 9999999864
No 352
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=45.36 E-value=55 Score=32.15 Aligned_cols=52 Identities=17% Similarity=0.371 Sum_probs=43.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCeeEEEEc-------------CCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 125 DSDLPVMNDAARTLSDFGVPYEIKILS-------------PHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpyDVrVaS-------------AHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
..|.+.+.+..+-+++.|||+|+.++- ..|-| ...++++..++.|.++++-+
T Consensus 329 Y~s~~ev~~vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FP-dp~~mv~~Lh~~G~k~vl~i 393 (898)
T 3lpp_A 329 YKSLDVVKEVVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFN-GLPQFVQDLHDHGQKYVIIL 393 (898)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTT-THHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCceeeEeccccccCCCcceEChhhCC-CHHHHHHHHHHCCCEEEEEe
Confidence 457888999999999999999999984 24556 67889999999999888755
No 353
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=45.29 E-value=1e+02 Score=23.68 Aligned_cols=61 Identities=8% Similarity=0.060 Sum_probs=38.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh-----------------------hHHHHHHHHHhh--CC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR-----------------------KGALSYALSAKE--RG 170 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP-----------------------~~l~eyak~ae~--~G 170 (188)
.++++|+|..+ -+...+++.|-+-|. .+.++ .|++ +.+.+++++..+ .+
T Consensus 2 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 2 NRGVIVTGGGH--GIGKQICLDFLEAGD--KVCFI--DIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 46888999887 456777777777774 33332 3444 444444544322 36
Q ss_pred CeEEEEecCccC
Q 029774 171 IKIIIVGDGVEA 182 (188)
Q Consensus 171 vkVIIAvAGmAA 182 (188)
++++|-.||...
T Consensus 76 id~lv~nAg~~~ 87 (247)
T 3dii_A 76 IDVLVNNACRGS 87 (247)
T ss_dssp CCEEEECCC-CC
T ss_pred CCEEEECCCCCC
Confidence 899999998753
No 354
>1no5_A Hypothetical protein HI0073; structural genomics, nucleotidyl transferase structure 2 function project, S2F, unknown function; 1.80A {Haemophilus influenzae} SCOP: d.218.1.5
Probab=45.08 E-value=79 Score=22.35 Aligned_cols=81 Identities=14% Similarity=0.184 Sum_probs=40.2
Q ss_pred ceeecccCCCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 99 VFEEENANGDSTGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 99 ~~~~~~~~g~~~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
+|-|. +.|+....++ -.++|+....-+.....+....|++.+.++.+.++.....+..+ ..+..++|. .|-..
T Consensus 32 LFGS~-ArG~~~~~SD-IDl~V~~~~~~~~~~~~~l~~~l~~~~~~~~vDlv~~~~~~~~~---~~~I~~eg~--~ly~~ 104 (114)
T 1no5_A 32 AFGSR-VKGKAKKYSD-LDLAIISEEPLDFLARDRLKEAFSESDLPWRVDLLDWATTSEDF---REIIRKVYV--VIQEK 104 (114)
T ss_dssp EEGGG-TTTCCCTTCC-EEEEEECSSCCCHHHHHHHHHHHHHSCCSSCEEEEEGGGSCHHH---HHHHHHSCE--EEECC
T ss_pred EEecc-CCCCCCCCCC-eEEEEEeCCCCCHHHHHHHHHHHHhcCCCCcEeEEEccCCCHHH---HHHHHhceE--EEEEC
Confidence 34443 3455333333 36888887656665556677778876555555555555555444 334445553 33344
Q ss_pred CccCcCcC
Q 029774 179 GVEAHLSG 186 (188)
Q Consensus 179 GmAAHLPG 186 (188)
..+=+-||
T Consensus 105 ~~~~~~~~ 112 (114)
T 1no5_A 105 EKTVEKPT 112 (114)
T ss_dssp C-------
T ss_pred CccccCCC
Confidence 44444444
No 355
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=44.94 E-value=86 Score=23.78 Aligned_cols=27 Identities=19% Similarity=0.335 Sum_probs=16.0
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCccC
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGmAA 182 (188)
++.+.+++++..+ .+++++|-.||...
T Consensus 69 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 69 ESDVINLVQSAIKEFGKLDVMINNAGLEN 97 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 4444444443322 26899999998653
No 356
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=44.92 E-value=27 Score=28.78 Aligned_cols=44 Identities=11% Similarity=0.096 Sum_probs=37.3
Q ss_pred HHHHHHhCCCeeEEEEcCCCCh-hHHHHHHHHHhhCCCeEEEEec
Q 029774 135 ARTLSDFGVPYEIKILSPHQNR-KGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 135 ~~vLeefGIpyDVrVaSAHRtP-~~l~eyak~ae~~GvkVIIAvA 178 (188)
...|+++|++|-+-..|.+|.. .++.+.++.+.+.|.++++++-
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg 125 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN 125 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5678999999999999998875 5788888888899999999873
No 357
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=44.79 E-value=1.1e+02 Score=23.66 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=17.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+.++++|+|..+ -+...++..|-+-|.
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (260)
T 2z1n_A 6 QGKLAVVTAGSS--GLGFASALELARNGA 32 (260)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 456888888877 455666666666663
No 358
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=44.63 E-value=88 Score=30.04 Aligned_cols=64 Identities=19% Similarity=0.132 Sum_probs=47.5
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCeeEEE------EcCCC---ChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 118 VGIIMESDSDLPVMNDAARTLSDFGVPYEIKI------LSPHQ---NRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 118 VaIIMGS~SDlpimekA~~vLeefGIpyDVrV------aSAHR---tP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
+.=|..|.||++.++++.+.+++.|...+.-+ .+++| +|+.+.++++.+.+-|++. |+++-+++
T Consensus 213 ~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~-I~l~DT~G 285 (718)
T 3bg3_A 213 VFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHI-LCIKDMAG 285 (718)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSE-EEEECTTS
T ss_pred EEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCE-EEEcCcCC
Confidence 33345689999999999999999997655433 25687 5899999999888888874 44544443
No 359
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=44.34 E-value=1e+02 Score=23.48 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=37.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh--------------------------HHHHHHHHHh
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK--------------------------GALSYALSAK 167 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~--------------------------~l~eyak~ae 167 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.++ .|.++ .+.++++...
T Consensus 14 l~~k~vlITGasg--giG~~~a~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 14 LQDKVAIITGGAG--GIGETTAKLFVRYGA--KVVIA--DIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp TTTCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--cCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 4457889999887 556666777766663 33333 34433 3344443322
Q ss_pred --hCCCeEEEEecCccC
Q 029774 168 --ERGIKIIIVGDGVEA 182 (188)
Q Consensus 168 --~~GvkVIIAvAGmAA 182 (188)
-.+++++|-.||...
T Consensus 88 ~~~~~id~li~~Ag~~~ 104 (278)
T 2bgk_A 88 AKHGKLDIMFGNVGVLS 104 (278)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCcccC
Confidence 136899999998653
No 360
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=43.97 E-value=1.2e+02 Score=24.82 Aligned_cols=104 Identities=6% Similarity=-0.026 Sum_probs=56.1
Q ss_pred eeeceeeeeccccccccccccceeecccccceeecccCCCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEE
Q 029774 69 SQGTIPVLASSNGSATSTRKDYSSVREPSTVFEEENANGDSTGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIK 148 (188)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVr 148 (188)
..-.||.|..|.. +.++..|..-.-|. .....- +....-.-.+|+||.-++--...++...+.+++.|+.....
T Consensus 90 ~~~~iP~Is~s~~--~~~~~~~~~~~~p~---~~~a~~-~~~~~~gw~~vaii~d~~~g~~~~~~~~~~~~~~g~~v~~~ 163 (389)
T 3o21_A 90 GALHTSFVTPSFP--TDADVQFVIQMRPA---LKGAIL-SLLSYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQVTAR 163 (389)
T ss_dssp HHHTCCEEECSCC--CSSCCSSEEECSCC---SHHHHH-HHHHHHTCCEEEEEECSTTCSHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCCceeecCCC--CccCCceEEEEccC---HHHHHH-HHHHhCCCCEEEEEEcCcHHHHHHHHHHHHhhcCCCeEEEE
Confidence 3557899976542 24566664332222 111000 00000112479999822222356777888889999865443
Q ss_pred EEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 149 ILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 149 VaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..-.-.....+...++..++.+.+|||...
T Consensus 164 ~~~~~~~~~d~~~~l~~ik~~~~~vii~~~ 193 (389)
T 3o21_A 164 SVGNIKDVQEFRRIIEEMDRRQEKRYLIDC 193 (389)
T ss_dssp ECTTCCCTHHHHHHHHHHHTTTCCEEEEES
T ss_pred EecCCCCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 311111333577777777777888887754
No 361
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=43.97 E-value=1.1e+02 Score=23.73 Aligned_cols=64 Identities=13% Similarity=0.044 Sum_probs=36.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE--------------------------cCCCChhHHHHHHHHHh
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL--------------------------SPHQNRKGALSYALSAK 167 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVa--------------------------SAHRtP~~l~eyak~ae 167 (188)
+..++++|+|..+- +...+++.|-+-|.. +-++ .=-..++.+.+++++..
T Consensus 6 l~~k~vlVTGas~G--IG~aia~~la~~G~~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 6 FTNRTIVVAGAGRD--IGRACAIRFAQEGAN--VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTTCEEEEETTTSH--HHHHHHHHHHHTTCE--EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch--HHHHHHHHHHHCCCE--EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 34568888888773 455666666666642 2222 11133455555555443
Q ss_pred h--CCCeEEEEecCcc
Q 029774 168 E--RGIKIIIVGDGVE 181 (188)
Q Consensus 168 ~--~GvkVIIAvAGmA 181 (188)
+ .+++++|-.||..
T Consensus 82 ~~~g~id~lv~nAg~~ 97 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGL 97 (259)
T ss_dssp HHHCSEEEEEECCCCC
T ss_pred HHhCCCCEEEECCCcc
Confidence 2 2578899888854
No 362
>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans}
Probab=43.94 E-value=37 Score=27.44 Aligned_cols=49 Identities=16% Similarity=0.066 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCeEEEEeccCCC------HHHHHHHHHHH----HHhCCCeeEEEEcCCCCh
Q 029774 106 NGDSTGKNDTPIVGIIMESDSD------LPVMNDAARTL----SDFGVPYEIKILSPHQNR 156 (188)
Q Consensus 106 ~g~~~~~~~~pkVaIIMGS~SD------lpimekA~~vL----eefGIpyDVrVaSAHRtP 156 (188)
+|++ .++++...-...+.+| -|.+.++.-+| +..||+|++.-+...+.|
T Consensus 11 ~~~~--~~~~~i~Ly~~~~~~~~~~~~~cP~~~rv~~~L~lL~e~kgi~ye~~~vd~~~~p 69 (291)
T 2yv9_A 11 NGDP--QSKPLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNVNSEA 69 (291)
T ss_dssp CCCG--GGSCEEEEEEEBCSSCTTSBCCCHHHHHHHHHHHHHHHTTSCEEEEEEECTTCHH
T ss_pred cCCC--CCCCCEEEEEecCCCCcCccCcChHHHHHHHHHHHHHHhcCceeEEEEeCCCChh
Confidence 6774 3443333334454444 38899998888 788999999998876554
No 363
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=43.93 E-value=76 Score=29.85 Aligned_cols=53 Identities=11% Similarity=0.016 Sum_probs=43.8
Q ss_pred cCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------CCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 124 SDSDLPVMNDAARTLSDFGVPYEIKILSP-------------HQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 124 S~SDlpimekA~~vLeefGIpyDVrVaSA-------------HRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
+.-|.+.+.+.++-+++.|||+|+-++-. +|-|+ ..+++++.++.|.++++-+
T Consensus 185 ~y~~~~ev~~v~~~~~~~~IP~dvi~lD~~y~~~~~dft~d~~~FPd-p~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 185 SYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFPE-PKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp TCCSHHHHHHHHHHHHHTTCCEEEEEECGGGSBTTBTTCCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCCcceEEEecceecCCccceEChhhCCC-HHHHHHHHHHCCCEEEEEe
Confidence 35578888999999999999999999863 46666 6889999999999988765
No 364
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=43.88 E-value=54 Score=27.35 Aligned_cols=66 Identities=17% Similarity=0.243 Sum_probs=39.5
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCC---eeEE--------------------------EEcCCCChhHHHHHH
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVP---YEIK--------------------------ILSPHQNRKGALSYA 163 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIp---yDVr--------------------------VaSAHRtP~~l~eya 163 (188)
||| +++||+=|.+|+|. +.++++||. ..+. .-+..=+|.++.++.
T Consensus 1 ~~M-ki~IvtDSt~dl~~-----e~~~~~~I~vvPl~v~~~~~~y~D~~di~~~efy~~~~~~~~p~TSqps~~~~~~~f 74 (289)
T 1pzx_A 1 NAM-PIEIITDSGADLPQ-----SYIREHRIAFLPLVVHWNGQDYKDGITIEPKQVYDAMRQGHTVKTAQPSPLAMKELF 74 (289)
T ss_dssp --C-CCEEEEEGGGCCCH-----HHHHHTTCEEECCEEEETTEEEEBTTTBCHHHHHHHHTTTCCCEEECCCHHHHHHHH
T ss_pred CCC-CEEEEEECCCCCCH-----HHHhhCCeEEEEEEEEECCEEEecCCCCCHHHHHHHHHhCCCCeeCCCCHHHHHHHH
Confidence 345 79999999999986 346778874 1111 133445677777777
Q ss_pred HHHhhCCCeEEEEecCccCcCcC
Q 029774 164 LSAKERGIKIIIVGDGVEAHLSG 186 (188)
Q Consensus 164 k~ae~~GvkVIIAvAGmAAHLPG 186 (188)
+...++|.+|| ++ .+|..|+|
T Consensus 75 ~~l~~~g~~ii-~i-~iSs~LSG 95 (289)
T 1pzx_A 75 LPYAKENRPCL-YI-AFSSKLSG 95 (289)
T ss_dssp HHHHHTTCCEE-EE-ECCTTTCS
T ss_pred HHHHhCCCeEE-EE-ECCCchhH
Confidence 66655664433 22 24455554
No 365
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=43.77 E-value=56 Score=25.92 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=47.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCCee-EEEEcCCCChhHHHHHHHHHh--hCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAK--ERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIpyD-VrVaSAHRtP~~l~eyak~ae--~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.|.+++ +.|-+|-=.|--..++++... ...++.+||..
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG 81 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALG 81 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEee
Confidence 5899999999888 778899999999996543 456677777777777765311 14589888853
No 366
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=43.76 E-value=78 Score=25.19 Aligned_cols=62 Identities=16% Similarity=0.219 Sum_probs=37.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh------------------------HHHHHHHHHhh-
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK------------------------GALSYALSAKE- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~------------------------~l~eyak~ae~- 168 (188)
++.++++|+|..+-+ ...++..|-+-|. .+-+ ..|+++ .+.++++...+
T Consensus 27 l~gk~vlVTGas~gI--G~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGI--GLAVARRLADEGC--HVLC--ADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp CTTCEEEETTTTSTH--HHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHH--HHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 446799999999864 4556666666664 2322 234444 44444443322
Q ss_pred -CCCeEEEEecCcc
Q 029774 169 -RGIKIIIVGDGVE 181 (188)
Q Consensus 169 -~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 101 ~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 101 FGGVDKLVANAGVV 114 (277)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 3689999999875
No 367
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=43.53 E-value=1.2e+02 Score=23.94 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=35.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC-------------------------CeeEEEEcCCCChhHHHHHHHHHhh
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV-------------------------PYEIKILSPHQNRKGALSYALSAKE 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI-------------------------pyDVrVaSAHRtP~~l~eyak~ae~ 168 (188)
...++++|+|..+ -+...+++.|-+-|. .... +..=-..++.+.+++++..+
T Consensus 29 l~gk~~lVTGas~--GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGSR--GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA-IRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTTS--HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEE-EECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEE-EECCCCCHHHHHHHHHHHHH
Confidence 3456888888776 344455555544443 2111 11122445555565554432
Q ss_pred --CCCeEEEEecCcc
Q 029774 169 --RGIKIIIVGDGVE 181 (188)
Q Consensus 169 --~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 106 ~~g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 106 ALGGLDILVNSAGIW 120 (271)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCcEEEECCCCC
Confidence 2588899888864
No 368
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=43.49 E-value=53 Score=25.52 Aligned_cols=60 Identities=10% Similarity=0.029 Sum_probs=36.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh------------------------hHHHHHHHHHh--hC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR------------------------KGALSYALSAK--ER 169 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP------------------------~~l~eyak~ae--~~ 169 (188)
+++++|+|..+- +...+++.|-+-|. .+.+ ..|.+ +.+.+++++.. -.
T Consensus 5 ~k~vlVTGas~g--IG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 5 AKVWLVTGASSG--FGRAIAEAAVAAGD--TVIG--TARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp CCEEEETTTTSH--HHHHHHHHHHHTTC--EEEE--EESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCCh--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 478999999874 55666777777674 3322 23443 33444443332 13
Q ss_pred CCeEEEEecCcc
Q 029774 170 GIKIIIVGDGVE 181 (188)
Q Consensus 170 GvkVIIAvAGmA 181 (188)
+++++|-.||..
T Consensus 79 ~id~lv~~Ag~~ 90 (281)
T 3m1a_A 79 RVDVLVNNAGRT 90 (281)
T ss_dssp CCSEEEECCCCE
T ss_pred CCCEEEECCCcC
Confidence 689999999864
No 369
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=43.49 E-value=1.1e+02 Score=25.01 Aligned_cols=33 Identities=9% Similarity=0.013 Sum_probs=22.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEE
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKIL 150 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVa 150 (188)
+..++++|+|..+ -+...++..|-+-|. .|.+.
T Consensus 7 l~gk~~lVTGas~--GIG~~~a~~La~~Ga--~Vv~~ 39 (319)
T 1gz6_A 7 FDGRVVLVTGAGG--GLGRAYALAFAERGA--LVVVN 39 (319)
T ss_dssp CTTCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEE
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE
Confidence 4457899999887 466677777777774 44443
No 370
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=43.32 E-value=1.3e+02 Score=24.16 Aligned_cols=64 Identities=16% Similarity=0.212 Sum_probs=42.5
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh-------CCCeeEEEEcCCCChhHHHHHHHHHhh-CCCeEEEEecC
Q 029774 116 PIVGIIMESDSD-----LPVMNDAARTLSDF-------GVPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD-----lpimekA~~vLeef-------GIpyDVrVaSAHRtP~~l~eyak~ae~-~GvkVIIAvAG 179 (188)
.+|+++.-.... .++.+.+...+++. |.++++.+....-.|+...+.++..-+ ++++.+|...+
T Consensus 8 ~~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~N~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~ 84 (385)
T 1pea_A 8 PLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYM 84 (385)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHTTTTBTTBCCEEEEECCTTCHHHHHHHHHHHHHTTCCCEEEECCS
T ss_pred eEEEEEECCCCcchhcCHHHHHHHHHHHHHhccccCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhhCCcEEEECCCc
Confidence 468888754322 23445555666665 666788888777888888777776654 77888886543
No 371
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=43.27 E-value=67 Score=26.09 Aligned_cols=61 Identities=3% Similarity=0.070 Sum_probs=37.1
Q ss_pred CeEEEEe-----ccCCCH-HHHHHHHHHHHH-hCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIM-----ESDSDL-PVMNDAARTLSD-FGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIM-----GS~SDl-pimekA~~vLee-fGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+||. .++.|. ..++...+.|++ .|+.......- ......+..+++..++ +.+|||...
T Consensus 147 ~~v~ii~~~d~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~-~~~~~d~~~~l~~i~~-~~~viv~~~ 214 (435)
T 1dp4_A 147 EHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFV-EGDPDHYPKLLRAVRR-KGRVIYICS 214 (435)
T ss_dssp CSEEEEEEECCSSSCCHHHHHHHHHHHHHHHHHCCEEEEEEEC-TTCGGGHHHHHHHHHH-HCSEEEEES
T ss_pred cEEEEEEEccCCCCcchHHHHHHHHHHHHHhhcCeEEEEEEEe-cCchhhHHHHHHHHHh-hCceEEEec
Confidence 4799992 333333 245566677777 99876554432 2345566666666666 677777654
No 372
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=43.19 E-value=16 Score=31.81 Aligned_cols=63 Identities=8% Similarity=-0.024 Sum_probs=41.7
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeE-EEEcCCCChhHHHHHHHHHhhCC---CeEEEEecCccC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEI-KILSPHQNRKGALSYALSAKERG---IKIIIVGDGVEA 182 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDV-rVaSAHRtP~~l~eyak~ae~~G---vkVIIAvAGmAA 182 (188)
++.||++..-.- ....+.|+.-|+++.+ .-...+-+.+.+.+.++.+++.+ +++|||+-|++.
T Consensus 55 ~~liVtd~~~~~---~~l~~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~ 121 (375)
T 3rf7_A 55 FVVFLVDDVHQH---KPLAARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGST 121 (375)
T ss_dssp CEEEEEEGGGTT---SHHHHHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHH
T ss_pred eEEEEECchhhh---hHHHHHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 577787643211 1344455555776632 12347777888888888887777 999999999864
No 373
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=43.01 E-value=1.1e+02 Score=23.43 Aligned_cols=64 Identities=11% Similarity=0.116 Sum_probs=36.9
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-----------------------CCChhHHHHHHHHHhh--
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-----------------------HQNRKGALSYALSAKE-- 168 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA-----------------------HRtP~~l~eyak~ae~-- 168 (188)
++.++++|+|..+ -+...+++.|-+-|. ++.+++- -..++.+.++++...+
T Consensus 5 l~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 5 LKDKLAVITGGAN--GIGRAIAERFAVEGA--DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 3457888888877 455666666666663 3333221 1223444444443322
Q ss_pred CCCeEEEEecCcc
Q 029774 169 RGIKIIIVGDGVE 181 (188)
Q Consensus 169 ~GvkVIIAvAGmA 181 (188)
.+++++|-.||..
T Consensus 81 g~id~lv~nAg~~ 93 (249)
T 2ew8_A 81 GRCDILVNNAGIY 93 (249)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689999999864
No 374
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=42.95 E-value=54 Score=28.09 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 126 SDLPVMNDAARTLSDFGVPY------------------E-IKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpy------------------D-VrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
-|+.-+.+-.+-|+++||.. + ..|-+..=+++++.++++++.++|++||+=+
T Consensus 47 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 47 GTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 47777777779999999951 2 2333344578999999999999999998743
No 375
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=42.51 E-value=1.1e+02 Score=24.34 Aligned_cols=34 Identities=24% Similarity=0.155 Sum_probs=25.7
Q ss_pred eEEEEeccCCC----HHHHHHHHHHHHHhCCCeeEEEE
Q 029774 117 IVGIIMESDSD----LPVMNDAARTLSDFGVPYEIKIL 150 (188)
Q Consensus 117 kVaIIMGS~SD----lpimekA~~vLeefGIpyDVrVa 150 (188)
+|.||.||..- ...++.+.+.|++-|.++++.=+
T Consensus 3 kiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 3 KVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp EEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 79999999875 46678888888888875554443
No 376
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=42.48 E-value=71 Score=24.73 Aligned_cols=66 Identities=12% Similarity=0.127 Sum_probs=36.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc------------------------CCCChhHHHHHHHHHhh--
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS------------------------PHQNRKGALSYALSAKE-- 168 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS------------------------AHRtP~~l~eyak~ae~-- 168 (188)
+.++++|+|..|.--+...+++.|-+-|. ++.+++ =-..++.+.++++...+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45688888887333455666666666663 333322 11223444444443322
Q ss_pred CCCeEEEEecCccC
Q 029774 169 RGIKIIIVGDGVEA 182 (188)
Q Consensus 169 ~GvkVIIAvAGmAA 182 (188)
.+++++|-.||...
T Consensus 85 g~iD~lv~~Ag~~~ 98 (261)
T 2wyu_A 85 GGLDYLVHAIAFAP 98 (261)
T ss_dssp SSEEEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 25899999998653
No 377
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=42.41 E-value=20 Score=26.28 Aligned_cols=47 Identities=13% Similarity=0.172 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCC-CChhHHHHHHHHHhhCCCeEEEEe
Q 029774 131 MNDAARTLSDFGVPYEIKILSPH-QNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 131 mekA~~vLeefGIpyDVrVaSAH-RtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.+++.+.|++.||+|+..-...- ++-+++.++..--.++-+|-++.-
T Consensus 2 ~~~~~~~L~~~~i~~~~~~~p~~~~t~~~~a~~lg~~~~~~~Ktlv~~ 49 (152)
T 1wdv_A 2 LEKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIVL 49 (152)
T ss_dssp -CHHHHHHHHHTCCCEEEECSSCCSSHHHHHHHHTSCGGGBEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEcCCCCCCHHHHHHHcCCCHHHeEEEEEEE
Confidence 46789999999999988766555 677777776643333334554443
No 378
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=42.39 E-value=84 Score=26.46 Aligned_cols=58 Identities=9% Similarity=0.066 Sum_probs=42.8
Q ss_pred eEEEEeccCCCH--------------HHHHHHHHHHHHhCCCeeEEEEcC------CC-ChhHHHHHHHHHhhCCCeEEE
Q 029774 117 IVGIIMESDSDL--------------PVMNDAARTLSDFGVPYEIKILSP------HQ-NRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 117 kVaIIMGS~SDl--------------pimekA~~vLeefGIpyDVrVaSA------HR-tP~~l~eyak~ae~~GvkVII 175 (188)
.|. +..|.||. +.++++.+.+++.|...+..+.-+ .| +|+.+.++++.+.+-|++.|.
T Consensus 97 ~v~-i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 97 EAC-VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEE-EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEE-EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 344 44588885 677888889999999877766654 23 578899999888888886543
No 379
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=42.35 E-value=1.1e+02 Score=23.24 Aligned_cols=68 Identities=9% Similarity=0.099 Sum_probs=38.8
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCC-eeEEEEcCC------------------------CChhHHHHHHHHHh
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVP-YEIKILSPH------------------------QNRKGALSYALSAK 167 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIp-yDVrVaSAH------------------------RtP~~l~eyak~ae 167 (188)
..+.++++|+|..+ -+...+++.|-+.|-. +.+.+++-. ..++.+.++++...
T Consensus 18 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 18 GSHMNSILITGCNR--GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp --CCSEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred CCCCCEEEEECCCC--cHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 34456888999877 4556677777766622 344433211 22344555554332
Q ss_pred hC----CCeEEEEecCccC
Q 029774 168 ER----GIKIIIVGDGVEA 182 (188)
Q Consensus 168 ~~----GvkVIIAvAGmAA 182 (188)
+. +++++|-.||...
T Consensus 96 ~~~g~~~id~li~~Ag~~~ 114 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAP 114 (267)
T ss_dssp HHHGGGCCSEEEECCCCCC
T ss_pred HhcCCCCccEEEECCCcCC
Confidence 21 5899999998654
No 380
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=42.23 E-value=1.1e+02 Score=23.23 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=40.2
Q ss_pred CeEEEEeccCCCHHH---HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh---CCCeEEEEecC
Q 029774 116 PIVGIIMESDSDLPV---MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE---RGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SDlpi---mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~---~GvkVIIAvAG 179 (188)
.+|+++.|...+... .+.-.+.|++.|++++ +....-+++...+.+++.-+ ..++.|++...
T Consensus 119 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d 186 (277)
T 3cs3_A 119 KKVLLLSGPEKGYDSQERLAVSTRELTRFGIPYE--IIQGDFTEPSGYAAAKKILSQPQTEPVDVFAFND 186 (277)
T ss_dssp SCEEEEECCTTSHHHHHHHHHHHHHHHHTTCCEE--EEECCSSHHHHHHHHHHHTTSCCCSSEEEEESSH
T ss_pred ceEEEEeCCccCccHHHHHHHHHHHHHHcCCCee--EEeCCCChhHHHHHHHHHHhcCCCCCcEEEEcCh
Confidence 479999998765433 3445577889999877 44444456665555544422 35788888654
No 381
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=42.21 E-value=1.1e+02 Score=27.14 Aligned_cols=59 Identities=17% Similarity=0.112 Sum_probs=40.9
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
...|.|+.-+...++.+.+....|.+-||..|+- |+.-..+.+-++.|+..|+..+|.+
T Consensus 419 ~~~V~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 477 (517)
T 4g85_A 419 ETQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 477 (517)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHTTCCEEEC----SSSSCCHHHHHHHHHHHCCCEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 3468888888888999999999999999988763 3222234444555666777555443
No 382
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=42.21 E-value=25 Score=25.26 Aligned_cols=39 Identities=15% Similarity=0.196 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCC-CChhHHHHHHHH
Q 029774 127 DLPVMNDAARTLSDFGVPYEIKILSPH-QNRKGALSYALS 165 (188)
Q Consensus 127 DlpimekA~~vLeefGIpyDVrVaSAH-RtP~~l~eyak~ 165 (188)
.=+.+++|...|++.||+|+.+=+..+ -+.+++.++.+.
T Consensus 14 ~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~~ 53 (120)
T 2kok_A 14 NCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKT 53 (120)
T ss_dssp SCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHHH
Confidence 448999999999999999987766533 244777777753
No 383
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=42.19 E-value=90 Score=24.71 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=39.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC--------------------------------CCChhHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP--------------------------------HQNRKGALS 161 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA--------------------------------HRtP~~l~e 161 (188)
++.++++|+|..+- +...+++.|-+-|. .+-+++- -..++.+.+
T Consensus 7 l~~k~vlVTGas~G--IG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 7 LRGKTMFISGGSRG--IGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp CTTCEEEEESCSSH--HHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 34578999998874 55667777766664 3333221 123444555
Q ss_pred HHHHHhh--CCCeEEEEecCccC
Q 029774 162 YALSAKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 162 yak~ae~--~GvkVIIAvAGmAA 182 (188)
++++..+ ..++++|-.||...
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~~ 105 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAIN 105 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 5554432 36899999998753
No 384
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=42.13 E-value=63 Score=26.75 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=36.7
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC---------------------CeeEEEEcCCCChhHHHHHHHHHhh--CCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV---------------------PYEIKILSPHQNRKGALSYALSAKE--RGI 171 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI---------------------pyDVrVaSAHRtP~~l~eyak~ae~--~Gv 171 (188)
+.||+||+|+.+- +.+.+++.|-+-|. ... .+..=-..++.+.++++...+ .++
T Consensus 28 ~gKvalVTGas~G--IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~-~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSG--IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAV-GIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCE-EEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999884 44555555555554 211 111223455566666654432 346
Q ss_pred eEEEEecCcc
Q 029774 172 KIIIVGDGVE 181 (188)
Q Consensus 172 kVIIAvAGmA 181 (188)
+++|--||..
T Consensus 105 DiLVNNAG~~ 114 (273)
T 4fgs_A 105 DVLFVNAGGG 114 (273)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 7888888764
No 385
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=41.99 E-value=79 Score=24.02 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=37.7
Q ss_pred CCCCeEEEEeccC-------CCHHHHHHHHHH----HHHhCCCe-eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCc
Q 029774 113 NDTPIVGIIMESD-------SDLPVMNDAART----LSDFGVPY-EIKILSPHQNRKGALSYALSAKERGIKIIIVGDGV 180 (188)
Q Consensus 113 ~~~pkVaIIMGS~-------SDlpimekA~~v----LeefGIpy-DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGm 180 (188)
.|+++|+||+=|+ -|-.- .-.... |+++|+.. ...+ .-=.++.+.+-++++.+++++++|.-.|.
T Consensus 3 ~m~~~v~Ii~~GdEl~~G~i~D~n~-~~l~~~~~~~l~~~G~~v~~~~i--v~Dd~~~I~~~l~~a~~~~~DlVittGG~ 79 (167)
T 2g2c_A 3 AMHIKSAIIVVSDRISTGTRENKAL-PLLQRLMSDELQDYSYELISEVV--VPEGYDTVVEAIATALKQGARFIITAGGT 79 (167)
T ss_dssp -CEEEEEEEEECHHHHHTSSCCCHH-HHHHHHHCC----CEEEEEEEEE--ECSSHHHHHHHHHHHHHTTCSEEEEESCC
T ss_pred CCccEEEEEEECCcccCCceeccHH-HHHHHhHHhHHHHCCCEEeEEEE--eCCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 3567898887443 23222 234555 88888753 2233 33456666666666655568999988887
Q ss_pred cC
Q 029774 181 EA 182 (188)
Q Consensus 181 AA 182 (188)
+.
T Consensus 80 g~ 81 (167)
T 2g2c_A 80 GI 81 (167)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 386
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=41.98 E-value=1.2e+02 Score=23.44 Aligned_cols=36 Identities=22% Similarity=0.074 Sum_probs=21.9
Q ss_pred hCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 141 FGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 141 fGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
.|.++++.+....-.|+...+.++..-+++++.+|.
T Consensus 40 ~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig 75 (346)
T 1usg_A 40 KGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIG 75 (346)
T ss_dssp TTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEc
Confidence 455556666666666666666665554556666664
No 387
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=41.84 E-value=1.4e+02 Score=24.11 Aligned_cols=31 Identities=13% Similarity=-0.026 Sum_probs=21.5
Q ss_pred CCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 111 GKNDTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 111 ~~~~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+..++.++++|+|..+ -+...+++.|-+-|.
T Consensus 22 m~~l~gk~vlVTGas~--GIG~aia~~la~~G~ 52 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGG--GIGRAHALAFAAEGA 52 (322)
T ss_dssp CCTTTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred hcccCCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 3345568999999987 455666777766664
No 388
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=41.78 E-value=1.3e+02 Score=23.94 Aligned_cols=61 Identities=18% Similarity=0.348 Sum_probs=44.2
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCC-----------------------eeEEEEcCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 119 GIIMESDSDLPVMNDAARTLSDFGVP-----------------------YEIKILSPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 119 aIIMGS~SDlpimekA~~vLeefGIp-----------------------yDVrVaSAHRtP~~l~eyak~ae~~GvkVII 175 (188)
.++.=|+-|..--.+-.+.+++-|+. .|+-|+-..-.-+...+|+++++++|+.||+
T Consensus 29 vvllysdqdekrrrerleefekqgvdvrtvedkedfrenireiwerypqldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 29 VVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp EEEEECCSCHHHHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecCchHHHHHHHHHHHHHcCCceeeeccHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 34555666666666666666666662 4677777777788899999999999999998
Q ss_pred EecC
Q 029774 176 VGDG 179 (188)
Q Consensus 176 AvAG 179 (188)
.-..
T Consensus 109 vynn 112 (162)
T 2l82_A 109 VYNN 112 (162)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7643
No 389
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=41.66 E-value=89 Score=27.05 Aligned_cols=54 Identities=9% Similarity=0.017 Sum_probs=45.2
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC
Q 029774 116 PIVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169 (188)
Q Consensus 116 pkVaIIMGS~SD-lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~ 169 (188)
.+..|+.|.+.| .-+++.-.+.++++||.++.....+.-+.+++.+.++...++
T Consensus 39 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 93 (300)
T 4a26_A 39 GLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNND 93 (300)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 457778887643 566888899999999999999999999999999999887654
No 390
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=41.65 E-value=1.2e+02 Score=24.87 Aligned_cols=27 Identities=19% Similarity=0.139 Sum_probs=16.6
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++++++|+|..+- +...+++.|-+-|.
T Consensus 4 ~~k~vlVTGas~G--IG~aia~~L~~~G~ 30 (324)
T 3u9l_A 4 SKKIILITGASSG--FGRLTAEALAGAGH 30 (324)
T ss_dssp -CCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCC
Confidence 3467888887764 45556666655563
No 391
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=41.59 E-value=32 Score=25.85 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHH
Q 029774 129 PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYAL 164 (188)
Q Consensus 129 pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak 164 (188)
|.++++.-+|++.||+||...+.......+-.+|.+
T Consensus 13 p~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 48 (228)
T 4hi7_A 13 PPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLK 48 (228)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHH
Confidence 788999999999999999998876554444445554
No 392
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=41.22 E-value=52 Score=23.97 Aligned_cols=38 Identities=11% Similarity=0.002 Sum_probs=31.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQN 155 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRt 155 (188)
.+|+|+.....+..-+-...+.|++-| |++.++|.+..
T Consensus 3 ~ki~il~~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~ 40 (168)
T 3l18_A 3 MKVLFLSADGFEDLELIYPLHRIKEEG--HEVYVASFQRG 40 (168)
T ss_dssp CEEEEECCTTBCHHHHHHHHHHHHHTT--CEEEEEESSSE
T ss_pred cEEEEEeCCCccHHHHHHHHHHHHHCC--CEEEEEECCCC
Confidence 479999999888888888889998876 68888887653
No 393
>3lzd_A DPH2; diphthamide biosynthesis, radical SAM enzyme, gene triplicat iron-sulfur cluster, biosynthetic protein; 2.10A {Pyrococcus horikoshii} PDB: 3lzc_A
Probab=41.21 E-value=42 Score=30.02 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=44.6
Q ss_pred CeEEEEecc---CCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMES---DSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS---~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
..++||+|+ ..-+.+++...+.|++.|.++.+-+.+ .=+|++|..| + +++||-+|
T Consensus 265 ~~~GIIvgTLg~Q~~~~~~~~L~~ll~~~Gkk~y~i~vg-~inp~KLanF-~------iD~fV~va 322 (378)
T 3lzd_A 265 KKFGVIVSIKKGQLRLAEAKRIVKLLKKHGREARLIVMN-DVNYHKLEGF-P------FEAYVVVA 322 (378)
T ss_dssp CEEEEEEECSTTTCCHHHHHHHHHHHHHTTCEEEEEEES-SCCHHHHTTS-C------CSEEEECS
T ss_pred CEEEEEEeCCccCCCHHHHHHHHHHHHHcCCcEEEEEeC-CCCHHHHhCC-C------CCEEEEec
Confidence 579999987 567889999999999999998877776 6688888766 2 67777665
No 394
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=40.93 E-value=83 Score=25.06 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=46.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHH-hCCC-e---eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSD-FGVP-Y---EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLee-fGIp-y---DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++ .|++ . .++|-+|-=.|--..++++ ...++.+||..
T Consensus 18 ~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 85 (159)
T 1kz1_A 18 LRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRASIA---RNTYDAVIGIG 85 (159)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSGGGHHHHHHHHHH---HSCCSEEEEEE
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEec
Confidence 4799999999888 778899999999 9986 2 3456667777766666654 45689998853
No 395
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=40.91 E-value=1e+02 Score=23.32 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=37.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh--------------HHHHHHHHHhhCCCeEEEEecCccC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK--------------GALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~--------------~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
++++|+|..+ -+...+++.|.+-|. +|.+++ |+++ .+.++++.. ..+++++|-.||...
T Consensus 2 k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~~--r~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCAT--GIGAATRKVLEAAGH--QIVGID--IRDAEVIADLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEE--SSSSSEECCTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCCT
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEe--CCchhhccccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCCC
Confidence 5889999988 567788888888774 444433 4332 222222211 135799999999653
No 396
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=40.87 E-value=72 Score=28.44 Aligned_cols=60 Identities=10% Similarity=0.066 Sum_probs=42.6
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh----------h---CCCeEEEEecCc
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK----------E---RGIKIIIVGDGV 180 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae----------~---~GvkVIIAvAGm 180 (188)
...++++|+|+ + .+.+.++..|.+.|. ++.|+ -|+++++.++++... + ..++++|-.||.
T Consensus 362 l~~k~vlV~Ga-G--Gig~aia~~L~~~G~--~V~i~--~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agv 434 (523)
T 2o7s_A 362 LASKTVVVIGA-G--GAGKALAYGAKEKGA--KVVIA--NRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSM 434 (523)
T ss_dssp ----CEEEECC-S--HHHHHHHHHHHHHCC---CEEE--ESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSST
T ss_pred cCCCEEEEECC-c--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCC
Confidence 34567889998 4 899999999999996 45444 699999888875431 1 136999999885
No 397
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=40.69 E-value=1e+02 Score=26.63 Aligned_cols=56 Identities=5% Similarity=0.014 Sum_probs=41.2
Q ss_pred EEEEeccCCC-------------HHHHHHHHHHHHHhC--CCeeEEEEcCCCC-hhHHHHHHHHHhhCCCeEE
Q 029774 118 VGIIMESDSD-------------LPVMNDAARTLSDFG--VPYEIKILSPHQN-RKGALSYALSAKERGIKII 174 (188)
Q Consensus 118 VaIIMGS~SD-------------lpimekA~~vLeefG--IpyDVrVaSAHRt-P~~l~eyak~ae~~GvkVI 174 (188)
+.-+..|.|| ++.+.++.+.+++.| +...+....+.|+ |+.+.++++.+.+- ++.|
T Consensus 90 ~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i 161 (382)
T 2ztj_A 90 GIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRV 161 (382)
T ss_dssp EEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEE
T ss_pred EEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEE
Confidence 3344557888 688899999999999 7777777778885 78888899888776 6543
No 398
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=40.63 E-value=61 Score=25.82 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=44.5
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHHHHhCCC-e-eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDL---PVMNDAARTLSDFGVP-Y-EIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDl---pimekA~~vLeefGIp-y-DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+|+.+.-.+. .-.+.|.+.|++.|++ + .+.|-+|-=.|--..++++ .++.+||..
T Consensus 18 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~-----~yDavIaLG 80 (160)
T 2c92_A 18 VRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR-----NHDAVVALG 80 (160)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT-----SCSEEEEEE
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh-----cCCEEEEEe
Confidence 4799999999998 7789999999999984 3 3456677766766655553 488888753
No 399
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=40.56 E-value=1.1e+02 Score=23.26 Aligned_cols=33 Identities=18% Similarity=0.105 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHH
Q 029774 128 LPVMNDAARTLSDFGVPYEIKILSPHQNRKGAL 160 (188)
Q Consensus 128 lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ 160 (188)
-+.+.++.-+|+..||+|++..+..-..++.+.
T Consensus 35 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~ 67 (246)
T 3rbt_A 35 NPYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFR 67 (246)
T ss_dssp CHHHHHHHHHHHHTTBCEEEEECCSSSCCHHHH
T ss_pred CccHHHHHHHHHHcCCCceEEEeCcccCCHHHH
Confidence 378999999999999999999888765555443
No 400
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=40.44 E-value=61 Score=31.31 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcC------------------CCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKILSP------------------HQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVaSA------------------HRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.|.+.+.+..+-+++.|||+|+-++.. .|-|+ ..+++++.+++|.++++-+
T Consensus 274 ~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d~~~~~gdftwd~~~FPd-p~~mv~~Lh~~G~k~vl~i 342 (817)
T 4ba0_A 274 RSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPT-PLDMMADFKQQGVKTVLIT 342 (817)
T ss_dssp CSHHHHHHHHHHHHHHTCCCCEEEECGGGSCSSSSSCTTCCSCCTTTCSC-HHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEcccccCCccccccCccccccccCCC-HHHHHHHHHHCCCEEEEEe
Confidence 377888899999999999999999874 24455 4788998999999888754
No 401
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=40.42 E-value=1.1e+02 Score=22.84 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=16.6
Q ss_pred ChhHHHHHHHHHhh--CCCeEEEEecCccC
Q 029774 155 NRKGALSYALSAKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 155 tP~~l~eyak~ae~--~GvkVIIAvAGmAA 182 (188)
.++.+.+.++...+ .+++++|-.||...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 71 SEQELSALADFAISKLGKVDILVNNAGGGG 100 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 34445554443322 36899999888754
No 402
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=40.39 E-value=46 Score=27.14 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=16.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCC----eeEEEEcCC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVP----YEIKILSPH 153 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIp----yDVrVaSAH 153 (188)
|.++-|.| ++.+...++++.+++.|++ .|+.+.|++
T Consensus 95 p~~~~i~g--~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~ 134 (314)
T 2e6f_A 95 PLFLSISG--LSVEENVAMVRRLAPVAQEKGVLLELNLSCPN 134 (314)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
T ss_pred cEEEEeCC--CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCC
Confidence 33444443 3444445555555544444 445444433
No 403
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=40.28 E-value=1.3e+02 Score=23.38 Aligned_cols=28 Identities=14% Similarity=0.159 Sum_probs=19.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
+..++++|+|..+- +...+++.|-+-|.
T Consensus 6 l~~k~~lVTGas~G--IG~aia~~l~~~G~ 33 (265)
T 3lf2_A 6 LSEAVAVVTGGSSG--IGLATVELLLEAGA 33 (265)
T ss_dssp CTTCEEEEETCSSH--HHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCCh--HHHHHHHHHHHCCC
Confidence 44578888888873 55666666666664
No 404
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=40.13 E-value=71 Score=24.44 Aligned_cols=56 Identities=9% Similarity=0.006 Sum_probs=31.7
Q ss_pred eEEEEeccCCCH----HHHHHHHHHHHHhCCCeeEEEEcCCCC-------------------hhHHHHHHHHHhhCCCeE
Q 029774 117 IVGIIMESDSDL----PVMNDAARTLSDFGVPYEIKILSPHQN-------------------RKGALSYALSAKERGIKI 173 (188)
Q Consensus 117 kVaIIMGS~SDl----pimekA~~vLeefGIpyDVrVaSAHRt-------------------P~~l~eyak~ae~~GvkV 173 (188)
+|.||.||...- ..++.+.+.| +-|. ++.++-.... ++.+.++.+..++ ++.
T Consensus 2 kiLiI~gspr~~s~t~~l~~~~~~~~-~~g~--~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~--AD~ 76 (196)
T 3lcm_A 2 KILIVYTHPNPTSFNAEILKQVQTNL-SKEH--TVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTW--ADH 76 (196)
T ss_dssp EEEEEECCSCTTSHHHHHHHHHHHHS-CTTS--EEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHH--CSE
T ss_pred EEEEEEeCCCCCChHHHHHHHHHHHh-cCCC--eEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHh--CCE
Confidence 799999998753 3344444444 3354 4444443322 3567777776666 455
Q ss_pred EEEe
Q 029774 174 IIVG 177 (188)
Q Consensus 174 IIAv 177 (188)
||-+
T Consensus 77 iV~~ 80 (196)
T 3lcm_A 77 LIFI 80 (196)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 405
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=40.06 E-value=69 Score=27.52 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHhCCC-------ee--------------------EEEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 126 SDLPVMNDAARTLSDFGVP-------YE--------------------IKILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 126 SDlpimekA~~vLeefGIp-------yD--------------------VrVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
-|+.-+.+-.+-|+++||. ++ ..|-+..=+++++.++++++.++|++||+=
T Consensus 40 G~~~gi~~~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 117 (478)
T 2guy_A 40 GTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVD 117 (478)
T ss_dssp BCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5677777777899999985 12 122223346899999999999999999973
No 406
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=39.95 E-value=1.3e+02 Score=23.20 Aligned_cols=66 Identities=15% Similarity=0.245 Sum_probs=38.4
Q ss_pred CCCeEEEEeccC-------CCHHHHHHHHHHHH---HhCCCeeEEEEcCCCChhHHHHHHHHHhh-CCCeEEEEecCccC
Q 029774 114 DTPIVGIIMESD-------SDLPVMNDAARTLS---DFGVPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDGVEA 182 (188)
Q Consensus 114 ~~pkVaIIMGS~-------SDlpimekA~~vLe---efGIpyDVrVaSAHRtP~~l~eyak~ae~-~GvkVIIAvAGmAA 182 (188)
.+++|+||+=|+ -|-.- .-....|+ ++|+..+..+ .-=.++.+.+-++++-+ .+++++|.-.|.+.
T Consensus 4 ~~~rv~IistGdE~~~G~i~Dsn~-~~l~~~l~~l~~~G~~v~~~i--v~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 4 KKAVIGVVTISDRASKGIYEDISG-KAIIDYLKDVIITPFEVEYRV--IPDERDLIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp -CCEEEEEEECHHHHHTSSCCHHH-HHHHHHHHHHBCSCCEEEEEE--ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CCCEEEEEEeCCcCCCCCeecchH-HHHHHHHHHHHhCCCEEEEEE--cCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 356898887433 24332 23555566 8898653332 22345566666655544 26899998887653
No 407
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=39.71 E-value=49 Score=28.62 Aligned_cols=53 Identities=15% Similarity=0.225 Sum_probs=39.1
Q ss_pred CCCHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 125 DSDLPVMNDAARTLSDFGVPY------------------E-IKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpy------------------D-VrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.-|+.-+.+-.+-|+++||.. + ..|-+.-=+.+++.++++++.++|++||+=+
T Consensus 52 ~Gdl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 123 (488)
T 2wc7_A 52 GGDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDG 123 (488)
T ss_dssp CCCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 357777777789999999951 2 2233333468899999999999999998743
No 408
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=39.70 E-value=1.2e+02 Score=24.86 Aligned_cols=59 Identities=17% Similarity=0.131 Sum_probs=39.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh-hCCCeEEEEe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae-~~GvkVIIAv 177 (188)
++.++++|+|..+ -+...+++.|-+-|. .+.++ .+|+++.+.+..++.+ ..+.++.+..
T Consensus 44 l~~k~~lVTGas~--GIG~aia~~La~~G~--~Vv~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~ 103 (328)
T 2qhx_A 44 PTVPVALVTGAAK--RLGRSIAEGLHAEGY--AVCLH-YHRSAAEANALSATLNARRPNSAITVQ 103 (328)
T ss_dssp -CCCEEEETTCSS--HHHHHHHHHHHHTTC--EEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE-cCCCHHHHHHHHHHHHhhcCCeEEEEE
Confidence 4567999999998 567788888888884 33332 3389998888877654 3344554433
No 409
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=39.69 E-value=64 Score=27.57 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 126 SDLPVMNDAARTLSDFGVPY-------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpy-------------------DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
-|+.=+.+-.+-|++|||.. +. .|-..-=+++++.++++++.++|++||+=
T Consensus 29 Gdl~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD 99 (549)
T 4aie_A 29 GDLQGIISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMD 99 (549)
T ss_dssp CCHHHHHTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 47776666678999999952 11 22233347899999999999999999973
No 410
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=39.53 E-value=1e+02 Score=26.53 Aligned_cols=54 Identities=15% Similarity=0.253 Sum_probs=44.7
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC
Q 029774 116 PIVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169 (188)
Q Consensus 116 pkVaIIMGS~SD-lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~ 169 (188)
....|+.|.+.+ .-+++.-.+.++++||.++.....+.-+.+++.+.++.+.++
T Consensus 36 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 90 (285)
T 3l07_A 36 KLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNND 90 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 356777787754 446788889999999999999999999999999999887654
No 411
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=39.39 E-value=1.2e+02 Score=22.93 Aligned_cols=35 Identities=3% Similarity=-0.109 Sum_probs=24.4
Q ss_pred CeEEEEeccCCC-----HHHHHHHHHHHHHh--CCCeeEEEE
Q 029774 116 PIVGIIMESDSD-----LPVMNDAARTLSDF--GVPYEIKIL 150 (188)
Q Consensus 116 pkVaIIMGS~SD-----lpimekA~~vLeef--GIpyDVrVa 150 (188)
++|.||.||..- ...++.+.+.|++- |.++++.=+
T Consensus 2 mkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 2 SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 379999999764 34567777777776 776554443
No 412
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=39.34 E-value=36 Score=24.81 Aligned_cols=41 Identities=10% Similarity=0.134 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChhHHHHHHHHH
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALSA 166 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVr-VaSAHRtP~~l~eyak~a 166 (188)
+.=+.+++|...|++.||+|+.+ |..-.=+.+++.++++..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 12 PACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHHc
Confidence 34579999999999999999865 444555677777777644
No 413
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=39.32 E-value=1.3e+02 Score=23.32 Aligned_cols=61 Identities=8% Similarity=0.062 Sum_probs=35.0
Q ss_pred CeEEEEeccCCCHHHH----HHHHH----HHHHhCCCeeEEEEcCC-------------CChhHHHHHHHHHhhCCCeEE
Q 029774 116 PIVGIIMESDSDLPVM----NDAAR----TLSDFGVPYEIKILSPH-------------QNRKGALSYALSAKERGIKII 174 (188)
Q Consensus 116 pkVaIIMGS~SDlpim----ekA~~----vLeefGIpyDVrVaSAH-------------RtP~~l~eyak~ae~~GvkVI 174 (188)
.+|.+|.||...-..- +.+.+ .|++-|-..++.++... -.++.+.++.+...+ ++.|
T Consensus 12 ~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~--AD~i 89 (191)
T 3k1y_A 12 RTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSA--SDGL 89 (191)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHH--CSEE
T ss_pred ceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHH--CCEE
Confidence 4899999999875443 33344 44444323344444322 134777788877766 4555
Q ss_pred EEec
Q 029774 175 IVGD 178 (188)
Q Consensus 175 IAvA 178 (188)
|-++
T Consensus 90 vi~s 93 (191)
T 3k1y_A 90 VVAT 93 (191)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5443
No 414
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=39.23 E-value=72 Score=24.03 Aligned_cols=39 Identities=5% Similarity=0.025 Sum_probs=31.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ 154 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHR 154 (188)
|+.+|+|+..-..+..-+-...++|++-| |++.++|...
T Consensus 2 m~~~v~ill~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~ 40 (197)
T 2rk3_A 2 ASKRALVILAKGAEEMETVIPVDVMRRAG--IKVTVAGLAG 40 (197)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTT--CEEEEEETTC
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHHCC--CEEEEEEcCC
Confidence 44589999987777777777888998887 6888999875
No 415
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=39.16 E-value=1.2e+02 Score=22.82 Aligned_cols=27 Identities=15% Similarity=0.227 Sum_probs=15.9
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCccC
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGVEA 182 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGmAA 182 (188)
++.+.+.++...+ .+++++|-.||...
T Consensus 74 ~~~~~~~~~~~~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 74 TESVQNAVRSVHEQEGRVDILVACAGICI 102 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 4444454443322 36899999988643
No 416
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=39.05 E-value=99 Score=26.18 Aligned_cols=51 Identities=18% Similarity=0.168 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCcc
Q 029774 130 VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 130 imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmA 181 (188)
.+.-+.. ++++|++.-.++..--|+.+.+.+++..+...|++=|.|..|=.
T Consensus 60 t~~~a~~-i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~ 110 (310)
T 3apt_A 60 SVAWAQR-IQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDP 110 (310)
T ss_dssp HHHHHHH-HHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred HHHHHHH-HHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 4444444 44899999999999999999999999999999999999988864
No 417
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=39.02 E-value=52 Score=23.95 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCC-CChhHHHHHHH
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKILSPH-QNRKGALSYAL 164 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVaSAH-RtP~~l~eyak 164 (188)
+.=+.+++|...|++.||+|+++=+.-+ -+.+++.++.+
T Consensus 9 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 9 PSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence 4458999999999999999987655533 34466666654
No 418
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=38.89 E-value=1.3e+02 Score=24.43 Aligned_cols=61 Identities=10% Similarity=0.027 Sum_probs=36.9
Q ss_pred CCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC-----------------CChhHHHHHHHHHhhCCCe
Q 029774 110 TGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH-----------------QNRKGALSYALSAKERGIK 172 (188)
Q Consensus 110 ~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH-----------------RtP~~l~eyak~ae~~Gvk 172 (188)
++.+++++|+|+ |+. +........++++|+. +.++... ..++.+.+++ ++.+++
T Consensus 6 pm~~~~~~ili~-g~g---~~~~~~~~a~~~~G~~--v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~---~~~~~d 76 (391)
T 1kjq_A 6 ALRPAATRVMLL-GSG---ELGKEVAIECQRLGVE--VIAVDRYADAPAMHVAHRSHVINMLDGDALRRVV---ELEKPH 76 (391)
T ss_dssp TTSTTCCEEEEE-SCS---HHHHHHHHHHHTTTCE--EEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHH---HHHCCS
T ss_pred CCCCCCCEEEEE-CCC---HHHHHHHHHHHHcCCE--EEEEECCCCCchhhhccceEECCCCCHHHHHHHH---HHcCCC
Confidence 344555688888 443 4678888899999984 3333321 2334444444 345688
Q ss_pred EEEEecC
Q 029774 173 IIIVGDG 179 (188)
Q Consensus 173 VIIAvAG 179 (188)
+++..-+
T Consensus 77 ~v~~~~e 83 (391)
T 1kjq_A 77 YIVPEIE 83 (391)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 8887543
No 419
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=38.73 E-value=1.1e+02 Score=23.18 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCcc
Q 029774 129 PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 129 pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmA 181 (188)
...+++.+.|++.|++++..+.. -. -...+.+.+++. +.++.++|..
T Consensus 199 ~~l~~~~~~l~~~~~~~~~~~~~--g~--~~~~i~~~a~~~--dliV~G~~~~ 245 (268)
T 3ab8_A 199 AWALEAEAYLRDHGVEASALVLG--GD--AADHLLRLQGPG--DLLALGAPVR 245 (268)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEC--SC--HHHHHHHHCCTT--EEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCceEEEEeC--CC--hHHHHHHHHHhC--CEEEECCccc
Confidence 34455555666666666655542 12 223334433333 6666655333
No 420
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=38.65 E-value=1e+02 Score=26.26 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=39.8
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
..|.|+..+..-++.+.+....|.+-||..|+- |+....+.+-++.|+..|+..+|.+
T Consensus 367 ~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 424 (464)
T 4g84_A 367 TQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 424 (464)
T ss_dssp CCEEEECSSSSCHHHHHHHHHHHHHTTCCEECC----SCSSCCHHHHHHHHHHHTCCEEEEC
T ss_pred ceEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 458888888888899999999999999987762 3222234444455666677655543
No 421
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=38.61 E-value=46 Score=23.27 Aligned_cols=56 Identities=14% Similarity=0.071 Sum_probs=37.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh-hCCC-eEEE
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK-ERGI-KIII 175 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae-~~Gv-kVII 175 (188)
+.|-|.+ .+.=|.+++|...|++.||+|+..=+ -..|+...++.+... .+.+ .|||
T Consensus 4 a~I~vYs--~~~Cp~C~~aK~~L~~~gi~y~~idi--~~d~~~~~~~~~~~~G~~tVP~I~i 61 (92)
T 2lqo_A 4 AALTIYT--TSWCGYCLRLKTALTANRIAYDEVDI--EHNRAAAEFVGSVNGGNRTVPTVKF 61 (92)
T ss_dssp SCEEEEE--CTTCSSHHHHHHHHHHTTCCCEEEET--TTCHHHHHHHHHHSSSSSCSCEEEE
T ss_pred CcEEEEc--CCCCHhHHHHHHHHHhcCCceEEEEc--CCCHHHHHHHHHHcCCCCEeCEEEE
Confidence 3454544 56778999999999999999975544 467877766665321 2344 4444
No 422
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=38.52 E-value=1.1e+02 Score=26.39 Aligned_cols=54 Identities=9% Similarity=0.118 Sum_probs=44.5
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC
Q 029774 116 PIVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169 (188)
Q Consensus 116 pkVaIIMGS~SD-lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~ 169 (188)
.+..|+.|.+.+ .-+++.-.+.++++||.++.....+.-+.+++.+.++.+.++
T Consensus 37 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 91 (286)
T 4a5o_A 37 GLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDD 91 (286)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 356777776644 455788889999999999999999999999999999887654
No 423
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=38.35 E-value=1.2e+02 Score=22.63 Aligned_cols=26 Identities=8% Similarity=0.240 Sum_probs=15.2
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
++.+.++++...+ .+++++|-.||..
T Consensus 66 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 66 LQSIRALRDFLRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence 4444444443322 2588899888864
No 424
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=37.96 E-value=82 Score=24.47 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHHHhCCCeeEEEEcCCCC------hhHHHHHHHHHhhCCCeEEEEec
Q 029774 127 DLPVMNDAARTLSDFGVPYEIKILSPHQN------RKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 127 DlpimekA~~vLeefGIpyDVrVaSAHRt------P~~l~eyak~ae~~GvkVIIAvA 178 (188)
.|.++++..+.|++.|+.+++... |. ...+.+-++.+.+.++++||.+=
T Consensus 31 ~l~ia~~l~~~L~~~G~~V~v~lt---R~d~~~~~~~~L~~R~~~An~~~aDlfISIH 85 (180)
T 3qay_A 31 NKSLAPVLADTFRKEGHKVDVIIC---PEKQFKTKNEEKSYKIPRVNSGGYDLLIELH 85 (180)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECC---CSSCCSSTTHHHHHHHHHHHHSCCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCcceEEEC---CCCCccccccCHHHHHHHHHhcCCCEEEEee
Confidence 478899999999999975433222 32 12466666667778899999873
No 425
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=37.75 E-value=66 Score=23.29 Aligned_cols=13 Identities=15% Similarity=0.225 Sum_probs=8.7
Q ss_pred CCCCeEEEEeccCC
Q 029774 113 NDTPIVGIIMESDS 126 (188)
Q Consensus 113 ~~~pkVaIIMGS~S 126 (188)
+|| +|.||.||..
T Consensus 2 ~mM-kilii~~S~r 14 (184)
T 1rli_A 2 NAM-KIAVINGGTR 14 (184)
T ss_dssp ----CEEEEESSCS
T ss_pred CCc-EEEEEECCCC
Confidence 344 7999999964
No 426
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=37.68 E-value=1.2e+02 Score=26.13 Aligned_cols=54 Identities=9% Similarity=0.146 Sum_probs=44.6
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC
Q 029774 116 PIVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169 (188)
Q Consensus 116 pkVaIIMGS~SD-lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~ 169 (188)
....|+.|.+.+ .-+++.-.+.++++||.++.....+.-+.+++.+.++.+.++
T Consensus 35 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 89 (285)
T 3p2o_A 35 CLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHD 89 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 356777776644 456888889999999999999999999999999999887654
No 427
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=37.42 E-value=41 Score=24.49 Aligned_cols=40 Identities=10% Similarity=0.059 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEE-cCCCChhHHHHHHHH
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKIL-SPHQNRKGALSYALS 165 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVa-SAHRtP~~l~eyak~ 165 (188)
+.=+.+++|...|++.||+|+.+=+ .-.=+.+++.++++.
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~ 51 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN 51 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence 3457999999999999999976544 344566777777754
No 428
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=37.26 E-value=89 Score=22.90 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=24.6
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCC
Q 029774 116 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQ 154 (188)
Q Consensus 116 pkVaIIMGS~SD--lpimekA~~vLeefGIpyDVrVaSAHR 154 (188)
++|.||.||..- ..+++.+.+.|++-|+ ++.++....
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~~g~--~v~~~~l~~ 44 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQGGF--EARVRTVPA 44 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHHTTC--EEEEEBCCC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhhCCC--EEEEEEhhh
Confidence 489999999743 3456677777777675 445555443
No 429
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=37.19 E-value=36 Score=24.88 Aligned_cols=41 Identities=5% Similarity=0.004 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChhHHHHHHHHH
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALSA 166 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVr-VaSAHRtP~~l~eyak~a 166 (188)
+.=+.+++|...|++.||+|+.+ |..-.-+.+++.++++..
T Consensus 13 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 54 (121)
T 3rdw_A 13 PRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQL 54 (121)
T ss_dssp TTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc
Confidence 34579999999999999999765 333445667777777543
No 430
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=37.14 E-value=1.7e+02 Score=23.76 Aligned_cols=43 Identities=7% Similarity=-0.001 Sum_probs=24.0
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSY 162 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ey 162 (188)
+.+++++|+|..+-+ ...+++.|-+-|. . |+-.-|+++++.+.
T Consensus 6 l~~k~vlVTGas~gI--G~~la~~l~~~G~--~--Vv~~~r~~~~~~~~ 48 (319)
T 3ioy_A 6 FAGRTAFVTGGANGV--GIGLVRQLLNQGC--K--VAIADIRQDSIDKA 48 (319)
T ss_dssp CTTCEEEEETTTSTH--HHHHHHHHHHTTC--E--EEEEESCHHHHHHH
T ss_pred CCCCEEEEcCCchHH--HHHHHHHHHHCCC--E--EEEEECCHHHHHHH
Confidence 445788888888764 4455555555553 2 33334555444433
No 431
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=37.12 E-value=79 Score=23.46 Aligned_cols=39 Identities=8% Similarity=0.135 Sum_probs=31.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCCh
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNR 156 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP 156 (188)
.+|+|+.....+..-+-...++|++-| |++.++|.+..|
T Consensus 10 ~~v~il~~~g~~~~e~~~~~~~l~~ag--~~v~~vs~~~~~ 48 (190)
T 2vrn_A 10 KKIAILAADGVEEIELTSPRAAIEAAG--GTTELISLEPGE 48 (190)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHTT--CEEEEEESSSSE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHCC--CEEEEEecCCCc
Confidence 579999988777777777788888876 688899987654
No 432
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=36.92 E-value=1.1e+02 Score=25.25 Aligned_cols=37 Identities=24% Similarity=0.297 Sum_probs=30.1
Q ss_pred CCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 142 GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 142 GIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
++|.-+++ ++.-+.+++.++++.+++.|++.|++..+
T Consensus 211 ~~Pv~vKi-~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 211 YVPIAVKI-APDLSEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCCEEEEC-CSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cCceEEEe-cCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 78999985 56667778899999999999998887654
No 433
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=36.82 E-value=1.7e+02 Score=23.82 Aligned_cols=64 Identities=13% Similarity=-0.104 Sum_probs=42.1
Q ss_pred eEEEEeccCCCH---HHHHHHHHHHHHhC-CCeeEEEEcCCCChhHH-HHHHHHHhhCCCeEEEEecCcc
Q 029774 117 IVGIIMESDSDL---PVMNDAARTLSDFG-VPYEIKILSPHQNRKGA-LSYALSAKERGIKIIIVGDGVE 181 (188)
Q Consensus 117 kVaIIMGS~SDl---pimekA~~vLeefG-IpyDVrVaSAHRtP~~l-~eyak~ae~~GvkVIIAvAGmA 181 (188)
+|.++..++-|. ..++++.+.|+.+| +++++.-+.. +.+.+. .++.+...+..-+++|-++|+.
T Consensus 36 ~ViLv~~~~~~~~~~~A~~~i~~~l~~~~~i~~e~~~vd~-~df~~~v~~i~~~i~~~~~~iivnlsGG~ 104 (244)
T 2wte_A 36 SLVIVVPSPIVSGTRAAIESLRAQISRLNYPPPRIYEIEI-TDFNLALSKILDIILTLPEPIISDLTMGM 104 (244)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHHHHHTCCCEEEEEECC-CSHHHHHHHHHHHHTTSCSSEEEECSSSC
T ss_pred EEEEEeCCCcchhHHHHHHHHHHHHHHcCCCceEEEEECC-ccHHHHHHHHHHHHhhcCCcEEEEecCCc
Confidence 688888776543 44667777788887 4888888875 565554 3344444432228999888874
No 434
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=36.66 E-value=1.5e+02 Score=23.11 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.8
Q ss_pred CCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 142 GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 142 GIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
|.++++.+....-.|+...+.++..-+++++.+|...+
T Consensus 41 G~~~~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~ 78 (356)
T 3ipc_A 41 GEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHAN 78 (356)
T ss_dssp TBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEEEecCCCCHHHHHHHHHHHHHCCCcEEEcCCC
Confidence 56678888888888888777777666677877776543
No 435
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=36.50 E-value=64 Score=27.80 Aligned_cols=52 Identities=21% Similarity=0.249 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCe-----------------eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 125 DSDLPVMNDAARTLSDFGVPY-----------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 125 ~SDlpimekA~~vLeefGIpy-----------------DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
.-|+.-+.+-.+-|+++||.. |. .|-...=+++++.++++++.++|++||+=
T Consensus 32 ~Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD 101 (424)
T 2dh2_A 32 AGNLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILD 101 (424)
T ss_dssp CCSHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 358888777788999999951 22 34444557899999999999999999874
No 436
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=36.43 E-value=70 Score=25.55 Aligned_cols=71 Identities=18% Similarity=0.208 Sum_probs=47.4
Q ss_pred eEEEEeccCCC-HHHHHHHHHHHHHhCCCe-eEEEEcCCC--ChhHHHHHHHHHhhC--CCeEEEEecCc-----cCcCc
Q 029774 117 IVGIIMESDSD-LPVMNDAARTLSDFGVPY-EIKILSPHQ--NRKGALSYALSAKER--GIKIIIVGDGV-----EAHLS 185 (188)
Q Consensus 117 kVaIIMGS~SD-lpimekA~~vLeefGIpy-DVrVaSAHR--tP~~l~eyak~ae~~--GvkVIIAvAGm-----AAHLP 185 (188)
.|-|..||+-. ++.=+...+.|++.|.++ |++.-+..+ -|+...+.++...+. +.-|+|++.|. ++-.|
T Consensus 12 ~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~siaANKv~ 91 (155)
T 1o1x_A 12 HVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGTGLGMSIAANRYR 91 (155)
T ss_dssp CCEEEEEECSTTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHTTST
T ss_pred ceeEEEeeCchHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHHHHhhcCC
Confidence 57889999877 777788888999999763 454444333 356555555554332 25788998884 55555
Q ss_pred CC
Q 029774 186 GT 187 (188)
Q Consensus 186 GV 187 (188)
|+
T Consensus 92 GI 93 (155)
T 1o1x_A 92 GI 93 (155)
T ss_dssp TC
T ss_pred Ce
Confidence 54
No 437
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=36.34 E-value=50 Score=24.44 Aligned_cols=65 Identities=17% Similarity=0.057 Sum_probs=45.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCe-----------------------eEEEEcCCCChhHHHHHHHHHhhCCCe
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPY-----------------------EIKILSPHQNRKGALSYALSAKERGIK 172 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpy-----------------------DVrVaSAHRtP~~l~eyak~ae~~Gvk 172 (188)
..|+||=.|...-.....+.+-|.+.|.+. ++.++..-+.|+.+.++++++.+.|++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p~~~v~~~v~e~~~~g~k 84 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYINPQNQLSEYNYILSLKPK 84 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSCHHHHGGGHHHHHHHCCS
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeCHHHHHHHHHHHHhcCCC
Confidence 358888666666667888888888777531 134555566777888888888777888
Q ss_pred EEEEecCc
Q 029774 173 IIIVGDGV 180 (188)
Q Consensus 173 VIIAvAGm 180 (188)
.+|--+|.
T Consensus 85 ~v~~~~G~ 92 (122)
T 3ff4_A 85 RVIFNPGT 92 (122)
T ss_dssp EEEECTTC
T ss_pred EEEECCCC
Confidence 77765554
No 438
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=36.22 E-value=84 Score=23.54 Aligned_cols=57 Identities=12% Similarity=0.124 Sum_probs=42.6
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe--------------------eEEEEcCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 119 GIIMESDSDLPVMNDAARTLSDFGVPY--------------------EIKILSPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 119 aIIMGS~SDlpimekA~~vLeefGIpy--------------------DVrVaSAHRtP~~l~eyak~ae~~GvkVII 175 (188)
.++.|.-+-...++.....|.++|++. -+-++|.-....++.+.++.++++|++++.
T Consensus 48 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~ 124 (201)
T 3fxa_A 48 IVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIG 124 (201)
T ss_dssp EEEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEE
T ss_pred EEEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEE
Confidence 355565555889999999999999863 245667777778888888888888877653
No 439
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=36.16 E-value=67 Score=28.72 Aligned_cols=51 Identities=18% Similarity=0.303 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHHhCCC----------------e---eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 126 SDLPVMNDAARTLSDFGVP----------------Y---EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 126 SDlpimekA~~vLeefGIp----------------y---DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
-|+.-+.+-.+.|+++||. | +. .|-+..=+++++.++++++.++|++||+=
T Consensus 42 Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD 112 (570)
T 1m53_A 42 GDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMID 112 (570)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 5788777777999999994 1 33 24444557899999999999999999974
No 440
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=35.92 E-value=1.1e+02 Score=23.58 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=34.6
Q ss_pred CeEEEEeccCC-CH-------HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 116 PIVGIIMESDS-DL-------PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 116 pkVaIIMGS~S-Dl-------pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
.+|.||.||.. .. ..++.+.+.|++-|. ++.++.... .+.+.++.+..++ ++.||-+
T Consensus 13 ~~iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~g~--~v~~~dL~~-~~d~~~~~~~l~~--AD~iV~~ 77 (204)
T 2amj_A 13 SNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGH--DVRIVRADS-DYDVKAEVQNFLW--ADVVIWQ 77 (204)
T ss_dssp CEEEEEECCC------CHHHHHHHHHHHHHHHHTTC--EEEEEESSS-CCCHHHHHHHHHH--CSEEEEE
T ss_pred cCEEEEEcCCCcccCcCcHHHHHHHHHHHHHHHcCC--EEEEEeCCc-cccHHHHHHHHHh--CCEEEEE
Confidence 58999999987 21 256677777777775 555555444 3456666666655 4555543
No 441
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=35.91 E-value=94 Score=24.27 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcC
Q 029774 132 NDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHL 184 (188)
Q Consensus 132 ekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHL 184 (188)
+++.+.+..-|++++..+....... ..+++.+++.+++++|.+.-....+
T Consensus 76 ~~~~~~~~~~~v~~~~~~~~~g~~~---~~i~~~a~~~~~DLiV~G~~g~~~~ 125 (319)
T 3olq_A 76 KQQARYYLEAGIQIDIKVIWHNRPY---EAIIEEVITDKHDLLIKMAHQHDKL 125 (319)
T ss_dssp HHHHHHHHHTTCCEEEEEEECSCHH---HHHHHHHHHHTCSEEEEEEBCC--C
T ss_pred HHHHHHHhhcCCeEEEEEEecCChH---HHHHHHHHhcCCCEEEEecCcCchh
Confidence 3444444567999888886333333 3444545556788888876554444
No 442
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=35.86 E-value=32 Score=25.08 Aligned_cols=41 Identities=7% Similarity=0.041 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEE-EEcCCCChhHHHHHHHHH
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIK-ILSPHQNRKGALSYALSA 166 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVr-VaSAHRtP~~l~eyak~a 166 (188)
+.=+.+++|...|++.||+|+.+ |..-.=+.+++.++++..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 12 PKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 34679999999999999999865 545556778888888654
No 443
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=35.82 E-value=1.5e+02 Score=22.72 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVII 175 (188)
.+++.++++.+..+++|+++-+- |-..+.+.++.+.+++.|+++.|
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~----~p~~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIVG----VPNYELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEE----EECGGGHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEe----cCCHHHHHHHHHHHHHcCCEEEE
Confidence 67888999999999999987552 22346777777777777877654
No 444
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=35.82 E-value=49 Score=27.87 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=33.3
Q ss_pred HHHHHHHhCCC-eeEEEE----cCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 134 AARTLSDFGVP-YEIKIL----SPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 134 A~~vLeefGIp-yDVrVa----SAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
..++|+++|++ +.+||- .-+=..+.+.++++.+++.|.+|++-.
T Consensus 32 ~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 32 LETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp HHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEe
Confidence 46889999998 455553 223446788888899999999999974
No 445
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=35.71 E-value=21 Score=30.31 Aligned_cols=38 Identities=16% Similarity=0.090 Sum_probs=19.3
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHh--CCCeeEEEEcCCC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDF--GVPYEIKILSPHQ 154 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeef--GIpyDVrVaSAHR 154 (188)
+|++|+|..++.-.+......|++- ++++.+-+.+.|+
T Consensus 29 kI~~v~Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~ 68 (403)
T 3ot5_A 29 KVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR 68 (403)
T ss_dssp EEEEEECSHHHHHHHHHHHHHHHTCTTTEEEEEEECC---
T ss_pred eEEEEEecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcH
Confidence 5666666666666666666666554 2333344444554
No 446
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=35.54 E-value=1.5e+02 Score=22.75 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=39.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcC-------------------CCChhHHHHHHHHHh-hCCCeE
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSP-------------------HQNRKGALSYALSAK-ERGIKI 173 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSA-------------------HRtP~~l~eyak~ae-~~GvkV 173 (188)
++.++++|+|..+ -+...+++.|-+-|. .+.+++- -..++.+.++++..+ -.++++
T Consensus 7 l~~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~ 82 (257)
T 3tl3_A 7 IRDAVAVVTGGAS--GLGLATTKRLLDAGA--QVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRI 82 (257)
T ss_dssp ---CEEEEETTTS--HHHHHHHHHHHHHTC--EEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred ecCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCE
Confidence 3457999999998 456777777777775 3333321 123444555554332 246899
Q ss_pred EEEecCcc
Q 029774 174 IIVGDGVE 181 (188)
Q Consensus 174 IIAvAGmA 181 (188)
+|-.||..
T Consensus 83 lv~nAg~~ 90 (257)
T 3tl3_A 83 VVNCAGTG 90 (257)
T ss_dssp EEECGGGS
T ss_pred EEECCCCC
Confidence 99999964
No 447
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=35.48 E-value=34 Score=25.66 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHH
Q 029774 129 PVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYAL 164 (188)
Q Consensus 129 pimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak 164 (188)
+.+.++.-+|++.||+||+..+........-.+|.+
T Consensus 12 ~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~ 47 (216)
T 3vk9_A 12 APCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLK 47 (216)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHH
T ss_pred hhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHH
Confidence 667889999999999999998876544444445543
No 448
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=35.27 E-value=51 Score=27.53 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=40.6
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCC---eeEEE-----EcCCCChhHHHHHHHHH-hhCCCeEEEEecCccCcCcC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVP---YEIKI-----LSPHQNRKGALSYALSA-KERGIKIIIVGDGVEAHLSG 186 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIp---yDVrV-----aSAHRtP~~l~eyak~a-e~~GvkVIIAvAGmAAHLPG 186 (188)
+++||+=|.+|+|. +.++++||. ..+.+ -+..=+|.++.++.++. ++.|++=+|++ .+|..|+|
T Consensus 5 ki~IvtDSt~dL~~-----e~~~~~~I~vvPL~v~~~~~~p~TSqps~~~~~~~f~~~~~~~~~d~Ii~I-~iSs~LSG 77 (277)
T 3egl_A 5 PVRVIVDSSACLPT-----HVAEDLDITVINLHVMNNGEERSTSGLSSLELAASYARQLERGGDDGVLAL-HISXELSS 77 (277)
T ss_dssp CCEEEEEGGGCCCH-----HHHHHTTEEEECCEEEECSSCEEEECCCHHHHHHHHHHHHHHTTTSCEEEE-CSCTTTCS
T ss_pred cEEEEEECCCCCCH-----HHHHHCCeEEEEEEEEECCcccccCCcCHHHHHHHHHHHHHhCCCCcEEEE-EeCcchhh
Confidence 69999999999984 567788874 33332 44566788888766543 44445433333 24455554
No 449
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=35.19 E-value=44 Score=28.46 Aligned_cols=77 Identities=10% Similarity=0.128 Sum_probs=46.7
Q ss_pred CCCCCCCeEEEEeccCCCHH---HHHHHHHHHHHhCCCe-eEEEEc---CCC--ChhHHHHHHHHHhhC--CCeEEEEec
Q 029774 110 TGKNDTPIVGIIMESDSDLP---VMNDAARTLSDFGVPY-EIKILS---PHQ--NRKGALSYALSAKER--GIKIIIVGD 178 (188)
Q Consensus 110 ~~~~~~pkVaIIMGS~SDlp---imekA~~vLeefGIpy-DVrVaS---AHR--tP~~l~eyak~ae~~--GvkVIIAvA 178 (188)
.+...| +|+++.|++-+.. +-+...+.|++.|.++ |++.-| ..+ -|+-....++...+. +.-|+|++.
T Consensus 15 ~~~~~m-kiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGT 93 (231)
T 3c5y_A 15 LYFQGM-KIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGT 93 (231)
T ss_dssp ----CC-EEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESS
T ss_pred HHhhcc-eEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCC
Confidence 334443 8999999999854 5566778899999752 444333 122 466666666554433 247889988
Q ss_pred Cc-----cCcCcCC
Q 029774 179 GV-----EAHLSGT 187 (188)
Q Consensus 179 Gm-----AAHLPGV 187 (188)
|. ++-.||+
T Consensus 94 GiG~sIAANKv~GI 107 (231)
T 3c5y_A 94 GMGSMLAANAMPGV 107 (231)
T ss_dssp SHHHHHHHHTSTTC
T ss_pred cHHHHHHHhcCCCe
Confidence 84 4445554
No 450
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=35.15 E-value=1.7e+02 Score=23.31 Aligned_cols=61 Identities=16% Similarity=0.205 Sum_probs=41.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh---------------------hCCCe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK---------------------ERGIK 172 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae---------------------~~Gvk 172 (188)
.+.+.++|+|+.+ .+...+...|.+.|. ++.+ .-|++++..++++... -+.++
T Consensus 117 l~gk~vlVtGaaG--GiG~aia~~L~~~G~--~V~i--~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~D 190 (287)
T 1lu9_A 117 VKGKKAVVLAGTG--PVGMRSAALLAGEGA--EVVL--CGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAH 190 (287)
T ss_dssp CTTCEEEEETCSS--HHHHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCcC--EEEE--EECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCC
Confidence 3457889999666 677888888988885 3444 4578877776654321 12368
Q ss_pred EEEEecCc
Q 029774 173 IIIVGDGV 180 (188)
Q Consensus 173 VIIAvAGm 180 (188)
++|-.||.
T Consensus 191 vlVn~ag~ 198 (287)
T 1lu9_A 191 FVFTAGAI 198 (287)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 88888864
No 451
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.09 E-value=1.6e+02 Score=24.24 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=30.8
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHH
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYA 163 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eya 163 (188)
-+.||+||+|+.| -+.+.++..|-+-|.. |-+. ..+.++++.+.+
T Consensus 7 L~GKvalVTGas~--GIG~aiA~~la~~Ga~--Vvi~-~r~~~~~~~~~~ 51 (247)
T 4hp8_A 7 LEGRKALVTGANT--GLGQAIAVGLAAAGAE--VVCA-ARRAPDETLDII 51 (247)
T ss_dssp CTTCEEEETTTTS--HHHHHHHHHHHHTTCE--EEEE-ESSCCHHHHHHH
T ss_pred CCCCEEEEeCcCC--HHHHHHHHHHHHcCCE--EEEE-eCCcHHHHHHHH
Confidence 3468999999998 5678888888888864 3232 344455554444
No 452
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=35.01 E-value=88 Score=28.05 Aligned_cols=50 Identities=28% Similarity=0.274 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 127 DLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 127 DlpimekA~~vLeefGIpy------------------DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
|+.-+.+-.+-|+++||.. +. .|-+..=+++++.++++++.++|++||+=
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD 239 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILD 239 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 6766655579999999951 22 34444457999999999999999999974
No 453
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=34.96 E-value=1.2e+02 Score=22.47 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhCCCeeEEEE-cCC--CChhHHHHHHHHHhhCCC
Q 029774 129 PVMNDAARTLSDFGVPYEIKIL-SPH--QNRKGALSYALSAKERGI 171 (188)
Q Consensus 129 pimekA~~vLeefGIpyDVrVa-SAH--RtP~~l~eyak~ae~~Gv 171 (188)
+.+.++.+.|.+.|++..++.. ... -+++.+.++++.+++.|.
T Consensus 147 ~~~~~~i~~l~~~g~~v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 147 HRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcCC
Confidence 5556666677777776655532 221 235666666666655553
No 454
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=34.89 E-value=1.6e+02 Score=22.83 Aligned_cols=60 Identities=13% Similarity=0.106 Sum_probs=39.5
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD--lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|++|.|.... ..-.+...+.|+++|++++..... +.+...+.++.... +++.|++...
T Consensus 134 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~~---~~~~~~~~~~~l~~-~~dai~~~~D 195 (295)
T 3lft_A 134 KTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAVP---STNEIASTVTVMTS-KVDAIWVPID 195 (295)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEES---SGGGHHHHHHHHTT-TCSEEEECSC
T ss_pred cEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEecC---CHHHHHHHHHHHHh-cCCEEEECCc
Confidence 479999997432 123567778889999987554332 35566666655543 5888888654
No 455
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=34.88 E-value=87 Score=27.17 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=44.2
Q ss_pred CCeEEEEeccCCCHH-HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhh
Q 029774 115 TPIVGIIMESDSDLP-VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKE 168 (188)
Q Consensus 115 ~pkVaIIMGS~SDlp-imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~ 168 (188)
+.++.|+.|.+.|-. +++.-.+.+++.||.++..-..+.-+.+++.+.+++..+
T Consensus 36 P~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~ 90 (301)
T 1a4i_A 36 PRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNE 90 (301)
T ss_dssp CEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 345777888765544 577788899999999999999999999999999987754
No 456
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=34.85 E-value=1.3e+02 Score=22.85 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=37.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhH------------------HHHHHHHHh--hCCCeEEE
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKG------------------ALSYALSAK--ERGIKIII 175 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~------------------l~eyak~ae--~~GvkVII 175 (188)
.++++|+|..+ -+...+++.|-+-|. ++.++ .|++++ +.++++... -.+++++|
T Consensus 2 ~k~vlVTGas~--giG~~~a~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv 75 (239)
T 2ekp_A 2 ERKALVTGGSR--GIGRAIAEALVARGY--RVAIA--SRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLV 75 (239)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESSCHHHHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEE
Confidence 36788999887 566777777777774 33333 344433 233333322 23689999
Q ss_pred EecCccC
Q 029774 176 VGDGVEA 182 (188)
Q Consensus 176 AvAGmAA 182 (188)
-.||...
T Consensus 76 ~~Ag~~~ 82 (239)
T 2ekp_A 76 HAAAVNV 82 (239)
T ss_dssp ECCCCCC
T ss_pred ECCCCCC
Confidence 9999653
No 457
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=34.75 E-value=1.3e+02 Score=21.92 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=41.1
Q ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCe---------------------eEEEEcCCCChhHHHHHHHHHhhCCCeEE
Q 029774 118 VGIIMESDSDLPVMNDAARTLSDFGVPY---------------------EIKILSPHQNRKGALSYALSAKERGIKII 174 (188)
Q Consensus 118 VaIIMGS~SDlpimekA~~vLeefGIpy---------------------DVrVaSAHRtP~~l~eyak~ae~~GvkVI 174 (188)
-.++.|.-+-...++.....|..+|++. -+-++|.-+...++.+.++.++++|++++
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi 118 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTM 118 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEE
Confidence 4566677777788888888888888763 23456666667778888888888887654
No 458
>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}
Probab=34.60 E-value=51 Score=24.11 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcC
Q 029774 128 LPVMNDAARTLSDFGVPYEIKILSP 152 (188)
Q Consensus 128 lpimekA~~vLeefGIpyDVrVaSA 152 (188)
-+.+.++.-+|+..||+|+...+..
T Consensus 12 s~~~~~v~~~L~~~gi~~e~~~v~~ 36 (210)
T 3m3m_A 12 SGNCYKIKLMLNLLGLPYEWQAVDI 36 (210)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCcHHHHHHHHHHcCCCCEEEEecC
Confidence 3678999999999999999998876
No 459
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=34.49 E-value=1.4e+02 Score=25.83 Aligned_cols=47 Identities=17% Similarity=0.212 Sum_probs=32.1
Q ss_pred CCCeEEEEeccC----------------CCHHHHHHHHHHHHHhCCCe-eEEEEc---CCCChhHHH
Q 029774 114 DTPIVGIIMESD----------------SDLPVMNDAARTLSDFGVPY-EIKILS---PHQNRKGAL 160 (188)
Q Consensus 114 ~~pkVaIIMGS~----------------SDlpimekA~~vLeefGIpy-DVrVaS---AHRtP~~l~ 160 (188)
.+..|||||-+- --.+.+.++.+.+.++||++ .+...| --|.++++.
T Consensus 55 iP~HVAIIMDGN~RwAk~rgl~r~~GH~~G~~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~ 121 (284)
T 2vg3_A 55 LPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVR 121 (284)
T ss_dssp SCSEEEEECCCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHH
T ss_pred CCCEEEEEecCChHHHHHcCCchhHHHHHHHHHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHH
Confidence 345799999873 34567788888888999996 344444 456666533
No 460
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=34.43 E-value=52 Score=24.78 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHH
Q 029774 128 LPVMNDAARTLSDFGVPYEIKILSPHQNRKGAL 160 (188)
Q Consensus 128 lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~ 160 (188)
-+.++++.-+|++.|++|++..+.....++.+.
T Consensus 32 sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~ 64 (241)
T 3vln_A 32 SPFAERTRLVLKAKGIRHEVININLKNKPEWFF 64 (241)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEEBCTTSCCTTHH
T ss_pred CcHHHHHHHHHHHcCCCCeEEecCcccCCHHHH
Confidence 378999999999999999999888665555443
No 461
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=34.35 E-value=97 Score=26.57 Aligned_cols=53 Identities=9% Similarity=-0.080 Sum_probs=43.3
Q ss_pred CeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC
Q 029774 116 PIVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169 (188)
Q Consensus 116 pkVaIIMGS~SD-lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~ 169 (188)
....|+.|.+.+ .-+++.-.+.++++|| ++.....+.-+.+++.+.+++..++
T Consensus 29 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D 82 (276)
T 3ngx_A 29 SLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKD 82 (276)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHC
T ss_pred cEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCC
Confidence 356677776654 4568888899999999 9999999999999999999877543
No 462
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=34.34 E-value=1.5e+02 Score=23.15 Aligned_cols=60 Identities=10% Similarity=0.090 Sum_probs=39.4
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 116 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD--lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+|++|.|.... ..-.+...+.|+++|++++.... .+.+...+.++.... +++.|++...
T Consensus 141 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~---~~~~~~~~~~~~l~~-~~dai~~~~D 202 (302)
T 2qh8_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATA---LKSADVQSATQAIAE-KSDVIYALID 202 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEEC---SSGGGHHHHHHHHGG-GCSEEEECSC
T ss_pred cEEEEEecCCCcchHHHHHHHHHHHHHcCCEEEEEec---CChHHHHHHHHHHhc-cCCEEEECCc
Confidence 479999987532 23356777888999998754432 235666666655543 5788887654
No 463
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=34.29 E-value=1.1e+02 Score=23.05 Aligned_cols=28 Identities=11% Similarity=0.149 Sum_probs=19.2
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+- +...+++.|-+-|.
T Consensus 5 ~~~k~vlITGasgg--iG~~la~~l~~~G~ 32 (264)
T 2pd6_A 5 LRSALALVTGAGSG--IGRAVSVRLAGEGA 32 (264)
T ss_dssp CTTCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 44578889998874 55666666666663
No 464
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=34.16 E-value=1.2e+02 Score=23.06 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=44.4
Q ss_pred EEEeccCCCHHHHHHHHHHHHHhCCCe---------------eEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 119 GIIMESDSDLPVMNDAARTLSDFGVPY---------------EIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 119 aIIMGS~SDlpimekA~~vLeefGIpy---------------DVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.++.|.-+=..+++.....|..+|.+. -+-++|.-+...++.+.++.++++|+++| ++.+
T Consensus 50 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI-~IT~ 124 (200)
T 1vim_A 50 IFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLV-AVTG 124 (200)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEE-EEES
T ss_pred EEEEEecHHHHHHHHHHHHHHhcCCeEEEeCCccccCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEE-EEEC
Confidence 344555555778888888888888753 25678888888889999999999898764 4444
No 465
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=34.16 E-value=34 Score=28.44 Aligned_cols=33 Identities=9% Similarity=0.151 Sum_probs=21.9
Q ss_pred CeEEEEeccCCCHH-----HHHHHHHHHHHhCCCeeEEEE
Q 029774 116 PIVGIIMESDSDLP-----VMNDAARTLSDFGVPYEIKIL 150 (188)
Q Consensus 116 pkVaIIMGS~SDlp-----imekA~~vLeefGIpyDVrVa 150 (188)
++|+||+|+.|-.- -+..+.+.|++.| |++-.+
T Consensus 4 kkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~g--y~v~~i 41 (357)
T 4fu0_A 4 KKIAVIFGGNSTEYEVSLQSASAVFENINTNK--FDIIPI 41 (357)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTT--EEEEEE
T ss_pred CEEEEEECCCccchHHHHHHHHHHHHHHhHhC--CEEEEE
Confidence 47999999998743 2445566666665 555544
No 466
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=34.13 E-value=1.5e+02 Score=22.21 Aligned_cols=25 Identities=16% Similarity=0.190 Sum_probs=14.9
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCc
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGV 180 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGm 180 (188)
++.+.+.+++..+ .+++++|-.||.
T Consensus 69 ~~~~~~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 69 SEACQQLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3444444443322 268999999986
No 467
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=34.12 E-value=50 Score=25.38 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=27.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH 153 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH 153 (188)
.|-+.+ .+.=+.+++|...|++.||+|+..-+..+
T Consensus 171 ~i~ly~--~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~ 205 (241)
T 1nm3_A 171 SISIFT--KPGCPFCAKAKQLLHDKGLSFEEIILGHD 205 (241)
T ss_dssp CEEEEE--CSSCHHHHHHHHHHHHHTCCCEEEETTTT
T ss_pred eEEEEE--CCCChHHHHHHHHHHHcCCceEEEECCCc
Confidence 455554 34569999999999999999988777655
No 468
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=34.08 E-value=1.7e+02 Score=22.84 Aligned_cols=60 Identities=13% Similarity=0.070 Sum_probs=35.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc-CCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS-PHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS-AHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
++.++++|+|..+- +...+++.|-+-|. .+-++. .-|..+.+.+..++.+..|.++....
T Consensus 9 l~~k~vlVTGas~G--IG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (262)
T 3ksu_A 9 LKNKVIVIAGGIKN--LGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ 69 (262)
T ss_dssp CTTCEEEEETCSSH--HHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCEEEEECCCch--HHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 44568888888764 45666666666664 333332 23456667777766665565655443
No 469
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=34.04 E-value=97 Score=24.89 Aligned_cols=61 Identities=7% Similarity=0.083 Sum_probs=0.0
Q ss_pred eEEEEeccCCCHHH--HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHH--HhhCCCeEEEEec
Q 029774 117 IVGIIMESDSDLPV--MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALS--AKERGIKIIIVGD 178 (188)
Q Consensus 117 kVaIIMGS~SDlpi--mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~--ae~~GvkVIIAvA 178 (188)
+|+||.++.+++.. .+...+.|++.|++. +...............+.. ..+.++++|++..
T Consensus 143 ~iaii~~~~~~~g~~~~~~~~~~l~~~G~~v-~~~~~~~~~~~d~~~~~~~~~l~~~~~dav~~~~ 207 (391)
T 3eaf_A 143 KLALAYDSKVAYSRSPIGAIKKAAPSLGLQV-VGDYDLPLRATEADAERIAREMLAADPDYVWCGN 207 (391)
T ss_dssp EEEEEECTTCHHHHTTHHHHHHHTGGGTEEE-EEEEECCTTCCHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEEEecCChhHHHHHHHHHHHHHHcCCce-eeeeccCCCCcCHHHHHHHHHHHHcCCCEEEEec
No 470
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=33.79 E-value=1.3e+02 Score=23.46 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=19.3
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+....++.|-+.|.
T Consensus 26 ~~~k~vlITGasg--gIG~~la~~l~~~G~ 53 (286)
T 1xu9_A 26 LQGKKVIVTGASK--GIGREMAYHLAKMGA 53 (286)
T ss_dssp GTTCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 3456888999887 456666666666663
No 471
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=33.74 E-value=58 Score=26.28 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=36.6
Q ss_pred CeEEEEeccCCCHH--HHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 116 PIVGIIMESDSDLP--VMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 116 pkVaIIMGS~SDlp--imekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
.+|+||. +.|+. .++...+.+++.|+...... .......+..+++..++.+.++||...
T Consensus 139 ~~v~ii~--d~~~g~~~~~~~~~~~~~~g~~v~~~~--~~~~~~d~~~~l~~i~~~~~~vi~~~~ 199 (395)
T 3h6g_A 139 KTVTVVY--DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKEMKRGKEFHVIFDC 199 (395)
T ss_dssp SEEEEEE--SSTHHHHHTHHHHTGGGTSSCEEEEEE--CCSSGGGGHHHHHHHHHTTCCEEEEES
T ss_pred eEEEEEE--EChhHHHHHHHHHHhhhcCCceEEEEE--eCCCchhHHHHHHHHhhcCCeEEEEEC
Confidence 4799985 44543 34455555667787654432 223345667777777777888877654
No 472
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=33.64 E-value=1.6e+02 Score=23.04 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=19.5
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+...+++.|-+-|.
T Consensus 27 ~~~k~vlVTGas~--gIG~~ia~~l~~~G~ 54 (283)
T 1g0o_A 27 LEGKVALVTGAGR--GIGREMAMELGRRGC 54 (283)
T ss_dssp CTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 4457899999887 456666666666664
No 473
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=33.63 E-value=1.5e+02 Score=22.20 Aligned_cols=28 Identities=18% Similarity=0.048 Sum_probs=19.7
Q ss_pred CCCeEEEEeccCCCHHHHHHHHHHHHHhCC
Q 029774 114 DTPIVGIIMESDSDLPVMNDAARTLSDFGV 143 (188)
Q Consensus 114 ~~pkVaIIMGS~SDlpimekA~~vLeefGI 143 (188)
++.++++|+|..+ -+....++.|-+-|.
T Consensus 4 ~~~k~vlVtGasg--giG~~~a~~l~~~G~ 31 (251)
T 1zk4_A 4 LDGKVAIITGGTL--GIGLAIATKFVEEGA 31 (251)
T ss_dssp TTTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCcEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 4457888999887 456667777766664
No 474
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=33.60 E-value=1.1e+02 Score=22.91 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHH
Q 029774 131 MNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSA 166 (188)
Q Consensus 131 mekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~a 166 (188)
...|...|+..||+|+..=++. .|+.-.++.+.+
T Consensus 19 c~~aK~lL~~kgV~feEidI~~--d~~~r~eM~~~~ 52 (121)
T 1u6t_A 19 QQDVLGFLEANKIGFEEKDIAA--NEENRKWMRENV 52 (121)
T ss_dssp HHHHHHHHHHTTCCEEEEECTT--CHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCceEEEECCC--CHHHHHHHHHhc
Confidence 4799999999999998877764 677777777665
No 475
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=33.57 E-value=75 Score=23.44 Aligned_cols=25 Identities=32% Similarity=0.283 Sum_probs=17.3
Q ss_pred eEEEEeccCC----CHHHHHHHHHHHHHh
Q 029774 117 IVGIIMESDS----DLPVMNDAARTLSDF 141 (188)
Q Consensus 117 kVaIIMGS~S----DlpimekA~~vLeef 141 (188)
+|.||.||.. =..+++.+.+.|++-
T Consensus 2 kilii~gS~r~~~~t~~la~~~~~~l~~~ 30 (191)
T 1t0i_A 2 KVGIIMGSVRAKRVCPEIAAYVKRTIENS 30 (191)
T ss_dssp EEEEEECCCCSSCSHHHHHHHHHHHHHTC
T ss_pred eEEEEeCCCCCCCchHHHHHHHHHHHHHh
Confidence 7999999974 244556666666654
No 476
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=33.56 E-value=91 Score=27.68 Aligned_cols=51 Identities=12% Similarity=0.270 Sum_probs=39.5
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 126 SDLPVMNDAARTLSDFGVPY-------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpy-------------------DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
-|+.-+.+-.+.|+++||.. +. .|-+..=+++++.++++++.++|++||+=
T Consensus 29 Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD 99 (557)
T 1zja_A 29 GDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVD 99 (557)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57877766678999999951 22 34445567899999999999999999863
No 477
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=33.47 E-value=1e+02 Score=27.70 Aligned_cols=50 Identities=18% Similarity=0.318 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------e-EEEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 127 DLPVMNDAARTLSDFGVPY------------------E-IKILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 127 DlpimekA~~vLeefGIpy------------------D-VrVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
|+.-+.+-.+-|+++||.. + ..|-+..=+++++.++++++.++|++||+=
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD 242 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLD 242 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 7776666679999999951 2 234444557899999999999999999973
No 478
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=33.44 E-value=92 Score=23.56 Aligned_cols=65 Identities=18% Similarity=0.109 Sum_probs=38.0
Q ss_pred CeEEEEeccCC-------CHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC-CCeEEEEecCccC
Q 029774 116 PIVGIIMESDS-------DLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER-GIKIIIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~S-------DlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~-GvkVIIAvAGmAA 182 (188)
++|+||+=|+. |-. ..-....|+++|+......+ .--.++.+.+-++++-++ +++++|.-.|.+.
T Consensus 2 ~~v~Ii~tGdEl~~G~i~D~n-~~~l~~~l~~~G~~v~~~~i-v~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 2 FRVGILTVSDKGFRGERQDTT-HLAIREVLAGGPFEVAAYEL-VPDEPPMIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp EEEEEEEECHHHHHTSSCCCH-HHHHHHHHTTSSEEEEEEEE-ECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred cEEEEEEEcCcccCCCcccch-HHHHHHHHHHCCCeEeEEEE-cCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 47877763332 322 22356778888875432222 223456666666665543 6899998877653
No 479
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=33.34 E-value=1.5e+02 Score=22.13 Aligned_cols=26 Identities=15% Similarity=0.277 Sum_probs=12.9
Q ss_pred hhHHHHHHHHHhh--CCCeEEEEecCcc
Q 029774 156 RKGALSYALSAKE--RGIKIIIVGDGVE 181 (188)
Q Consensus 156 P~~l~eyak~ae~--~GvkVIIAvAGmA 181 (188)
++.+.+.++...+ .+++++|-.||..
T Consensus 67 ~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 67 PEDVENMVKTAMDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC---
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3444444433221 2688999888864
No 480
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=33.24 E-value=74 Score=21.61 Aligned_cols=45 Identities=11% Similarity=-0.011 Sum_probs=31.5
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCC-ChhHHHHHH
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQ-NRKGALSYA 163 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHR-tP~~l~eya 163 (188)
+|.|.+. +.=|.++++...|+++|++|+..-+..+. ....+.+++
T Consensus 20 ~v~vy~~--~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l 65 (113)
T 3rhb_A 20 TVVIYSK--TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVL 65 (113)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHH
T ss_pred CEEEEEC--CCChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHH
Confidence 3656554 45699999999999999999877776552 223444444
No 481
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=33.13 E-value=1.4e+02 Score=25.47 Aligned_cols=70 Identities=20% Similarity=0.305 Sum_probs=44.4
Q ss_pred CCCeEEEEeccCC----------------CHHHHHHHHHHHHHhCCCe-eEEEEc---CCCChhHHHHH-----------
Q 029774 114 DTPIVGIIMESDS----------------DLPVMNDAARTLSDFGVPY-EIKILS---PHQNRKGALSY----------- 162 (188)
Q Consensus 114 ~~pkVaIIMGS~S----------------DlpimekA~~vLeefGIpy-DVrVaS---AHRtP~~l~ey----------- 162 (188)
.+..|||||=+-- -...++++.+.+.++||++ .+...| -.|.++++..+
T Consensus 24 iP~HVAiIMDGN~RwAk~rgl~r~~GH~~G~~~~~~iv~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~ 103 (256)
T 4h8e_A 24 IPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTF 103 (256)
T ss_dssp CCSEEEEECCCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEETTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEEchhhhCCCHHHHHHHHHHHHHHHHHH
Confidence 3457999995543 2345678888889999996 566666 56877775532
Q ss_pred HHHHhhCCCeEEEEecCccCcCc
Q 029774 163 ALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 163 ak~ae~~GvkVIIAvAGmAAHLP 185 (188)
++...++|++|-+. |--..||
T Consensus 104 ~~~l~~~~vrvr~i--Gd~~~Lp 124 (256)
T 4h8e_A 104 LPELIEKNVKVETI--GFTDKLP 124 (256)
T ss_dssp HHHHHHTTCEEEEE--SCGGGSC
T ss_pred HHHHHHcCeEEEEe--cCcccCC
Confidence 23344566666554 4444455
No 482
>3pam_A Transmembrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.31A {Bartonella henselae}
Probab=33.11 E-value=1.2e+02 Score=23.41 Aligned_cols=56 Identities=20% Similarity=0.134 Sum_probs=38.4
Q ss_pred eEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecC
Q 029774 117 IVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDG 179 (188)
Q Consensus 117 kVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAG 179 (188)
.+-++..+.....+++-+.+.|+++||..+++... ...|.+...+..+++++..-+
T Consensus 130 ~l~~~~~~~~~~~~a~~iq~~l~~iGI~v~i~~~~-------~~~~~~~~~~~~~d~~~~~w~ 185 (259)
T 3pam_A 130 QFEIMTQSLEEEKVALAFQSNLSRLGIHAEIRTVD-------DSQYQNRLGMFNYDMIIGKLK 185 (259)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHTTTCEEEEEECC-------HHHHHHHHHHTCCSEEEEEEC
T ss_pred EEEEEeCCchHHHHHHHHHHHHHHcCCEEEEEecC-------HHHHHHHHhcCCeeEEEeccC
Confidence 46666665444567888889999999988888764 233444444567898887544
No 483
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=33.09 E-value=65 Score=26.09 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=54.3
Q ss_pred eeceeeeeccccccccccccceeecccccceeecccCCCCCCCCCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEE
Q 029774 70 QGTIPVLASSNGSATSTRKDYSSVREPSTVFEEENANGDSTGKNDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKI 149 (188)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrV 149 (188)
.-.||.|..+... .++.+|..-..|. .....- +....-.-.+|+||.-.+--...++...+.+++.|+......
T Consensus 89 ~~~iP~is~~~~~--~~~~~~~~~~~p~---~~~a~~-~~~~~~g~~~v~ii~d~~~g~~~~~~~~~~~~~~g~~v~~~~ 162 (384)
T 3saj_A 89 ALHVCFITPSFPV--DTSNQFVLQLRPE---LQEALI-SIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVN 162 (384)
T ss_dssp HHTCCEEECSCCC--SSCCTTEEECSCC---CHHHHH-HHHHHTTCCEEEEEECSTTCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCCCCeEeccccC--cCccCceEEeccc---HHHHHH-HHHHHCCCcEEEEEEeCchhHHHHHHHHHHhhhcCceEEEEE
Confidence 3468888765332 3456665433332 111100 000011224799998333334567777888899998654444
Q ss_pred EcCCCChhHHHHHHHHHhhCCCeEEEEec
Q 029774 150 LSPHQNRKGALSYALSAKERGIKIIIVGD 178 (188)
Q Consensus 150 aSAHRtP~~l~eyak~ae~~GvkVIIAvA 178 (188)
........+..++...++.+.+|||...
T Consensus 163 -~~~~~~~d~~~~l~~ik~~~~~vii~~~ 190 (384)
T 3saj_A 163 -ILTTTEEGYRMLFQDLEKKKERLVVVDC 190 (384)
T ss_dssp -GGGCCHHHHHHTTTTCCSCSEEEEEEEC
T ss_pred -eccCCchhHHHHHHHHhccCCcEEEEEc
Confidence 2222344555566666666777777654
No 484
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=33.06 E-value=1.6e+02 Score=22.31 Aligned_cols=26 Identities=15% Similarity=0.100 Sum_probs=15.4
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHHHhC
Q 029774 115 TPIVGIIMESDSDLPVMNDAARTLSDFG 142 (188)
Q Consensus 115 ~pkVaIIMGS~SDlpimekA~~vLeefG 142 (188)
+.++.+|+|..+ -+....++.|-+-|
T Consensus 20 ~~k~vlItGasg--giG~~la~~l~~~G 45 (274)
T 1ja9_A 20 AGKVALTTGAGR--GIGRGIAIELGRRG 45 (274)
T ss_dssp TTCEEEETTTTS--HHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCC
Confidence 346777787765 34455555555555
No 485
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=32.94 E-value=1.7e+02 Score=23.02 Aligned_cols=50 Identities=12% Similarity=0.150 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHh-----CCCeeEEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccCcCc
Q 029774 130 VMNDAARTLSDF-----GVPYEIKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEAHLS 185 (188)
Q Consensus 130 imekA~~vLeef-----GIpyDVrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAAHLP 185 (188)
.++++.+.+++. |++++..+..- . -...+++.++ +++++|.++-....+.
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g--~--~~~~I~~~a~--~~DliV~G~~g~~~~~ 137 (309)
T 3cis_A 83 LIDDALKVVEQASLRAGPPTVHSEIVPA--A--AVPTLVDMSK--DAVLMVVGCLGSGRWP 137 (309)
T ss_dssp HHHHHHHHHHHHCSSSCCSCEEEEEESS--C--HHHHHHHHGG--GEEEEEEESSCTTCCT
T ss_pred HHHHHHHHHHHhcccCCCceEEEEEecC--C--HHHHHHHHhc--CCCEEEECCCCCcccc
Confidence 345556666665 88888877632 2 2334444443 5888888876554443
No 486
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=32.93 E-value=1e+02 Score=26.55 Aligned_cols=55 Identities=7% Similarity=0.013 Sum_probs=44.4
Q ss_pred CCeEEEEeccCCC-HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHhhC
Q 029774 115 TPIVGIIMESDSD-LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAKER 169 (188)
Q Consensus 115 ~pkVaIIMGS~SD-lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae~~ 169 (188)
+..+.|+.|.+.+ .-+++.-.+.++++||.++..-..+.-+.+++.+.+++..++
T Consensus 33 P~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D 88 (281)
T 2c2x_A 33 PGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNAN 88 (281)
T ss_dssp CEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred ceEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 3456777776654 445777888999999999999999999999999999877543
No 487
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=32.89 E-value=32 Score=28.76 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=25.3
Q ss_pred CeEEEEeccCCCHHH--HHHHHHHHHHhCC-CeeEEEEcCCCC
Q 029774 116 PIVGIIMESDSDLPV--MNDAARTLSDFGV-PYEIKILSPHQN 155 (188)
Q Consensus 116 pkVaIIMGS~SDlpi--mekA~~vLeefGI-pyDVrVaSAHRt 155 (188)
.+|+|++|+.|-..- ..-+..+++.+.- .|++..+..+|.
T Consensus 4 ~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~~ 46 (364)
T 3i12_A 4 LRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDKA 46 (364)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTT
T ss_pred cEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEECCC
Confidence 479999999997644 2334444444432 277777776654
No 488
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=32.88 E-value=1.7e+02 Score=22.55 Aligned_cols=64 Identities=5% Similarity=-0.217 Sum_probs=39.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCC---------CChhHHHHHHHHHhhC--CCeE-EEEecCccC
Q 029774 116 PIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPH---------QNRKGALSYALSAKER--GIKI-IIVGDGVEA 182 (188)
Q Consensus 116 pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAH---------RtP~~l~eyak~ae~~--GvkV-IIAvAGmAA 182 (188)
.+|+|++ ..-...-+.-.+.|++.|++... +.+.- -.++.+.+.++.+.+. |+++ |+++.++..
T Consensus 109 ~rvgvlt--~~~~~~~~~~~~~l~~~G~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~gadaIvLgCT~l~~ 184 (223)
T 2dgd_A 109 RKLWIGT--PYIKERTLEEVEWWRNKGFEIVG-YDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKADAVYIACTALST 184 (223)
T ss_dssp CEEEEEE--SSCHHHHHHHHHHHHTTTCEEEE-EEECCCCSHHHHHTCCHHHHHHHHHTTHHHHTTSSEEEECCTTSCC
T ss_pred CeEEEEe--CCchHHHHHHHHHHHhCCcEEec-ccCCCCCCcchhhccCHHHHHHHHHHHhcccCCCCEEEEeCCcccH
Confidence 4899996 33344455666788889986422 22222 2466777777777666 7765 456666653
No 489
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=32.80 E-value=1.5e+02 Score=23.23 Aligned_cols=65 Identities=8% Similarity=0.045 Sum_probs=45.6
Q ss_pred CCeEEEEeccCCC-----HHHHHHHHHHHHHhC-----CCeeEEEEcCCCChhHHHHHHHHHhh-CCCeEEEEecC
Q 029774 115 TPIVGIIMESDSD-----LPVMNDAARTLSDFG-----VPYEIKILSPHQNRKGALSYALSAKE-RGIKIIIVGDG 179 (188)
Q Consensus 115 ~pkVaIIMGS~SD-----lpimekA~~vLeefG-----IpyDVrVaSAHRtP~~l~eyak~ae~-~GvkVIIAvAG 179 (188)
.-+|+++.--... .++.+.+...+++.| .++++.+....-.|++..+.++..-+ ++++.+|...+
T Consensus 16 ~i~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~ng~~~g~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~ 91 (375)
T 4evq_A 16 ALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVH 91 (375)
T ss_dssp CEEEEEEECSSSTTHHHHHHHHHHHHHHHHHTTTEETTEEEEEEEEECTTCHHHHHHHHHCCCCCSCCSEEEECSS
T ss_pred CeEEEEEeCCCCcchhcCHHHHHHHHHHHHHhCCCcCCEEEEEEEecCCCCHHHHHHHHHHHHhcCCceEEEcCCc
Confidence 3468888753322 244556666777774 45888888899999999888877755 47888887644
No 490
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=32.72 E-value=1e+02 Score=23.96 Aligned_cols=65 Identities=17% Similarity=0.088 Sum_probs=38.3
Q ss_pred CCCeEEEEecc--CCCHHHHHHHHHHHHHhCCCeeEEEEcC-----------------------CCChhHHHHHHHHHhh
Q 029774 114 DTPIVGIIMES--DSDLPVMNDAARTLSDFGVPYEIKILSP-----------------------HQNRKGALSYALSAKE 168 (188)
Q Consensus 114 ~~pkVaIIMGS--~SDlpimekA~~vLeefGIpyDVrVaSA-----------------------HRtP~~l~eyak~ae~ 168 (188)
++.++++|+|. .+- +...+++.|-+-|. .+.+++- -..++.+.++++...+
T Consensus 5 l~~k~vlVTGa~~s~g--IG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 5 LDGKRILVSGIITDSS--IAFHIARVAQEQGA--QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTCEEEECCCSSTTS--HHHHHHHHHHHTTC--EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCc--hHHHHHHHHHHCCC--EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHH
Confidence 34578999997 554 56666777766664 3333221 1223444555544432
Q ss_pred C-----CCeEEEEecCccC
Q 029774 169 R-----GIKIIIVGDGVEA 182 (188)
Q Consensus 169 ~-----GvkVIIAvAGmAA 182 (188)
. +++++|-.||...
T Consensus 81 ~~g~~~~iD~lv~nAg~~~ 99 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMP 99 (269)
T ss_dssp HHCTTCCEEEEEECCCCCC
T ss_pred HhCCCCCceEEEECCccCc
Confidence 1 6899999999653
No 491
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=32.51 E-value=89 Score=28.31 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHhCCCe------------------eE-EEEcCCCChhHHHHHHHHHhhCCCeEEEE
Q 029774 127 DLPVMNDAARTLSDFGVPY------------------EI-KILSPHQNRKGALSYALSAKERGIKIIIV 176 (188)
Q Consensus 127 DlpimekA~~vLeefGIpy------------------DV-rVaSAHRtP~~l~eyak~ae~~GvkVIIA 176 (188)
|+.=+.+=.+-|++|||.. +. .|-+.-=+++++.++++++.++|++||+=
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD 305 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILD 305 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEE
Confidence 6776666678999999951 22 23344457999999999999999999974
No 492
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=32.43 E-value=1.1e+02 Score=24.29 Aligned_cols=66 Identities=11% Similarity=0.102 Sum_probs=40.8
Q ss_pred CCCeEEEEeccCC------CHHHHHHHHHHHHHhCCCee-EEEEcCCCChhHHHHHHHHHhhCCCeEEEEecCccC
Q 029774 114 DTPIVGIIMESDS------DLPVMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAKERGIKIIIVGDGVEA 182 (188)
Q Consensus 114 ~~pkVaIIMGS~S------DlpimekA~~vLeefGIpyD-VrVaSAHRtP~~l~eyak~ae~~GvkVIIAvAGmAA 182 (188)
.+++|+||+=|+. |- -..-....|+++|+... ..++ -=.++.+.+-++++-.++++++|.-.|.+.
T Consensus 29 ~~~rvaIistGdEl~~G~~Ds-n~~~L~~~L~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~DlVIttGGts~ 101 (185)
T 3rfq_A 29 VVGRALVVVVDDRTAHGDEDH-SGPLVTELLTEAGFVVDGVVAV--EADEVDIRNALNTAVIGGVDLVVSVGGTGV 101 (185)
T ss_dssp CCEEEEEEEECHHHHTTCCCS-HHHHHHHHHHHTTEEEEEEEEE--CSCHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred CCCEEEEEEECcccCCCCcCc-HHHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4568988875532 22 23456778899997533 2233 234566666665554456899998888764
No 493
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=32.28 E-value=71 Score=28.41 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHhCCCe-------------------eEE-EEcCCCChhHHHHHHHHHhhCCCeEEEEe
Q 029774 126 SDLPVMNDAARTLSDFGVPY-------------------EIK-ILSPHQNRKGALSYALSAKERGIKIIIVG 177 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpy-------------------DVr-VaSAHRtP~~l~eyak~ae~~GvkVIIAv 177 (188)
-|+.-+.+-.+.|+++||.. +.. |-+..=+.+++.++++++.++|++||+=+
T Consensus 28 Gdl~gi~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 28 GDLRGIISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 57877777778999999851 323 44444578899999999999999998743
No 494
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=32.14 E-value=1.7e+02 Score=22.47 Aligned_cols=61 Identities=16% Similarity=0.172 Sum_probs=39.6
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEcCCCChh----------------HHHHHHHHHhhCCCeEEEE
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILSPHQNRK----------------GALSYALSAKERGIKIIIV 176 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaSAHRtP~----------------~l~eyak~ae~~GvkVIIA 176 (188)
....++++|+|..+ -+...+++.|-+-|. ++.++ .|.++ .+.++++... +++++|-
T Consensus 16 ~~~~k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~iD~lv~ 87 (249)
T 1o5i_A 16 GIRDKGVLVLAASR--GIGRAVADVLSQEGA--EVTIC--ARNEELLKRSGHRYVVCDLRKDLDLLFEKVK--EVDILVL 87 (249)
T ss_dssp CCTTCEEEEESCSS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHTCSEEEECCTTTCHHHHHHHSC--CCSEEEE
T ss_pred ccCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--cCCHHHHHhhCCeEEEeeHHHHHHHHHHHhc--CCCEEEE
Confidence 34457999999998 566777777877774 34333 34443 3334443332 6899999
Q ss_pred ecCcc
Q 029774 177 GDGVE 181 (188)
Q Consensus 177 vAGmA 181 (188)
.||..
T Consensus 88 ~Ag~~ 92 (249)
T 1o5i_A 88 NAGGP 92 (249)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99864
No 495
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=32.03 E-value=1.4e+02 Score=22.89 Aligned_cols=64 Identities=5% Similarity=-0.017 Sum_probs=44.6
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHHHHhCCCeeEEEEcCCCChhHHHHHHHHHh--hCCCeEEEEecC
Q 029774 116 PIVGIIMESDSD--LPVMNDAARTLSDFGVPYEIKILSPHQNRKGALSYALSAK--ERGIKIIIVGDG 179 (188)
Q Consensus 116 pkVaIIMGS~SD--lpimekA~~vLeefGIpyDVrVaSAHRtP~~l~eyak~ae--~~GvkVIIAvAG 179 (188)
.+|+++.|.... ..-.+.-.+.|++.|++++..+....-+++...+.+++.- ...++.|++...
T Consensus 127 ~~I~~i~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d 194 (289)
T 3k9c_A 127 RNIAHIDGADAPGGADRRAGFLAAMDRHGLSASATVVTGGTTETEGAEGMHTLLEMPTPPTAVVAFND 194 (289)
T ss_dssp CSEEEECCTTSTTHHHHHHHHHHHHHHTTCGGGEEEECCCSSHHHHHHHHHHHHTSSSCCSEEEESSH
T ss_pred CcEEEEeCCCCccHHHHHHHHHHHHHHCCCCCCccEEECCCCHHHHHHHHHHHHcCCCCCCEEEECCh
Confidence 479999997754 2234556678899999987677777777777666665442 345788888654
No 496
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=32.02 E-value=1.3e+02 Score=26.59 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=37.3
Q ss_pred CCH-HHHHHHHHHHHHhCCCeeEEEE-----------------------------cCCCChhHHHHHHHHHhhCCCeEEE
Q 029774 126 SDL-PVMNDAARTLSDFGVPYEIKIL-----------------------------SPHQNRKGALSYALSAKERGIKIII 175 (188)
Q Consensus 126 SDl-pimekA~~vLeefGIpyDVrVa-----------------------------SAHRtP~~l~eyak~ae~~GvkVII 175 (188)
-|+ .-+.+-.+.|+++||.+ |.+. +.-=+++++.++++++.++|++||+
T Consensus 33 Gd~~~gi~~~LdyLk~LGvt~-IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~Vil 111 (527)
T 1gcy_A 33 NDWYNILRQQAATIAADGFSA-IWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLY 111 (527)
T ss_dssp TTHHHHHHHHHHHHHHTTCSE-EEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCE-EEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 467 88888889999999962 1111 1112477899999999999999987
Q ss_pred E
Q 029774 176 V 176 (188)
Q Consensus 176 A 176 (188)
=
T Consensus 112 D 112 (527)
T 1gcy_A 112 D 112 (527)
T ss_dssp E
T ss_pred E
Confidence 3
No 497
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=32.01 E-value=1.7e+02 Score=22.21 Aligned_cols=65 Identities=14% Similarity=0.206 Sum_probs=39.6
Q ss_pred CCeEEEEeccC-----CCHHHHHHHHHHHHHhCCCee-EEEEcCCCChhHHHHHHHHHhh-CCCeEEEEecCccC
Q 029774 115 TPIVGIIMESD-----SDLPVMNDAARTLSDFGVPYE-IKILSPHQNRKGALSYALSAKE-RGIKIIIVGDGVEA 182 (188)
Q Consensus 115 ~pkVaIIMGS~-----SDlpimekA~~vLeefGIpyD-VrVaSAHRtP~~l~eyak~ae~-~GvkVIIAvAGmAA 182 (188)
+++|+||+=|+ -|-. ..-....|+++|+... ..++ --.++.+.+-++++.+ ++++++|.-.|.+.
T Consensus 13 ~~rv~Ii~tGdElg~i~Dsn-~~~l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 13 EVRCKIVTISDTRTEETDKS-GQLLHELLKEAGHKVTSYEIV--KDDKESIQQAVLAGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp CCEEEEEEECSSCCTTTCHH-HHHHHHHHHHHTCEEEEEEEE--CSSHHHHHHHHHHHHTCTTCSEEEEECCCSS
T ss_pred CCEEEEEEEcCccCeeccCh-HHHHHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 46898887443 3433 2346677899998643 3333 2345566665655544 36899998887754
No 498
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=31.99 E-value=41 Score=23.90 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHHHHHhCCCeeEEEEcC-CCChhHHHHHHHH
Q 029774 126 SDLPVMNDAARTLSDFGVPYEIKILSP-HQNRKGALSYALS 165 (188)
Q Consensus 126 SDlpimekA~~vLeefGIpyDVrVaSA-HRtP~~l~eyak~ 165 (188)
+.=+.+++|...|++.||+|+..=+.. .=+.+.+.++++.
T Consensus 8 ~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~ 48 (114)
T 1rw1_A 8 KACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHh
Confidence 445889999999999999997765553 3344777777753
No 499
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=31.96 E-value=26 Score=29.19 Aligned_cols=28 Identities=11% Similarity=-0.009 Sum_probs=17.1
Q ss_pred CChhHHHHHHHHHhhCCCeEEEEecCccCcCcC
Q 029774 154 QNRKGALSYALSAKERGIKIIIVGDGVEAHLSG 186 (188)
Q Consensus 154 RtP~~l~eyak~ae~~GvkVIIAvAGmAAHLPG 186 (188)
-+..++..+++ ..+++|+.-.+..||+.
T Consensus 250 ~sl~e~~ali~-----~a~~~i~~DsG~~HlAa 277 (349)
T 3tov_A 250 FQLGPLAAAMN-----RCNLLITNDSGPMHVGI 277 (349)
T ss_dssp CCHHHHHHHHH-----TCSEEEEESSHHHHHHH
T ss_pred CCHHHHHHHHH-----hCCEEEECCCCHHHHHH
Confidence 34445555554 26788888777766643
No 500
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=31.96 E-value=1.8e+02 Score=22.73 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=45.2
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHhCCCeeEEEEc---------------CCCChhHHHHHHHHHhh--CCCeEEE
Q 029774 113 NDTPIVGIIMESDSDLPVMNDAARTLSDFGVPYEIKILS---------------PHQNRKGALSYALSAKE--RGIKIII 175 (188)
Q Consensus 113 ~~~pkVaIIMGS~SDlpimekA~~vLeefGIpyDVrVaS---------------AHRtP~~l~eyak~ae~--~GvkVII 175 (188)
....++++|+|..+ -+...+++.|-+-|.. +-+++ =-..++.+.++++...+ .+++++|
T Consensus 11 ~~~~k~vlVTGas~--GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 86 (269)
T 3vtz_A 11 EFTDKVAIVTGGSS--GIGLAVVDALVRYGAK--VVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV 86 (269)
T ss_dssp TTTTCEEEESSTTS--HHHHHHHHHHHHTTCE--EEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34467999999998 5677788888887853 33322 12345667777765543 3689999
Q ss_pred EecCccC
Q 029774 176 VGDGVEA 182 (188)
Q Consensus 176 AvAGmAA 182 (188)
-.||...
T Consensus 87 ~nAg~~~ 93 (269)
T 3vtz_A 87 NNAGIEQ 93 (269)
T ss_dssp ECCCCCC
T ss_pred ECCCcCC
Confidence 9999753
Done!