BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029778
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3T0S0|TM128_BOVIN Transmembrane protein 128 OS=Bos taurus GN=TMEM128 PE=2 SV=1
Length = 165
Score = 37.0 bits (84), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 23/157 (14%)
Query: 28 LEDDACSRPQPFSPSIPRAKTWVEI-LENVLWIASALFIIYYGD----RHSNFIYLLWHD 82
LE + RP+ + + K + + + WI +++ + YY D NF W
Sbjct: 24 LEHEGYPRPETSTAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFQTVKENFHTSSW-- 81
Query: 83 ERIRRLPLYLGMVLVGLNVAFFFYTSM-LVW--NVRRFDEKWESFCISALPYVTLLGVVS 139
G L+ ++V+ FY + L W + +D K+ + +P T +V+
Sbjct: 82 -------FLFGSALLLVSVSIAFYCIVYLEWYRGIEDYDIKYPAL----IPITTATFIVA 130
Query: 140 FFLLSFALWPIWSFLTLPLLFTLFMASMVIFPHSMIG 176
+ ALW +WSF T LLFT FM V+ S++G
Sbjct: 131 GICFNVALWHVWSFFTPVLLFTQFMG--VVMLTSLLG 165
>sp|Q9CZB9|TM128_MOUSE Transmembrane protein 128 OS=Mus musculus GN=Tmem128 PE=2 SV=2
Length = 163
Score = 37.0 bits (84), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 23/147 (15%)
Query: 27 DLEDDACSRPQPFSPSIPRAKTWVEILENV---LWIASALFIIYYGDRHSNFIYLLWHDE 83
D ED+A +P +P+ K N+ WI +++ + YY D F E
Sbjct: 23 DCEDEA----KPETPTAVEKKERPLPRLNIHSGFWILASIVVTYYVDFFKTF------KE 72
Query: 84 RIRRLPLYL---GMVLVGLNVAFFFYTSMLVW--NVRRFDEKWESFCISALPYVTLLGVV 138
+L ++ V L++AF+ L W + +D K+ + +P T +
Sbjct: 73 NFHTNSWFLFGGALLFVSLSIAFYCIV-YLEWYRGIEEYDVKYPTL----VPITTATFIA 127
Query: 139 SFFLLSFALWPIWSFLTLPLLFTLFMA 165
+ + ALW +WSF T LLFT FM
Sbjct: 128 AGICFNLALWNVWSFFTPLLLFTQFMG 154
>sp|Q5BJH2|TM128_HUMAN Transmembrane protein 128 OS=Homo sapiens GN=TMEM128 PE=2 SV=1
Length = 165
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 25/136 (18%)
Query: 44 PRAKTWVEILENVL---------WIASALFIIYYGDRHSNFIYLLWHDERIRRLPLYL-- 92
P T VE E L WI +++ + YY D E +L
Sbjct: 32 PETSTAVEKKEKPLPRLNIHSGFWILASIVVTYYVDFFKTL------KENFHTSSWFLCG 85
Query: 93 -GMVLVGLNVAFFFYTSMLVW--NVRRFDEKWESFCISALPYVTLLGVVSFFLLSFALWP 149
++LV L++AF+ L W + +D K+ + +P T + + + ALW
Sbjct: 86 SALLLVSLSIAFYCIV-YLEWYCGIGEYDVKYPAL----IPITTASFIAAGICFNIALWH 140
Query: 150 IWSFLTLPLLFTLFMA 165
+WSF T LLFT FM
Sbjct: 141 VWSFFTPLLLFTQFMG 156
>sp|Q646F5|T2R10_PAPHA Taste receptor type 2 member 10 OS=Papio hamadryas GN=TAS2R10 PE=3
SV=1
Length = 307
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 26/128 (20%)
Query: 37 QPFSPSIPRAKTWVEIL--------ENVLWIASALFIIYYGD--RHSNFIYLLWHDERIR 86
Q FSP + + +E + ++ +W A++L I Y+ SN+I+L W RI
Sbjct: 68 QIFSPDVYASGNLIEYISYFWVITNQSSIWFATSLSIFYFLKIANFSNYIFL-WLKSRIN 126
Query: 87 R-LPLYLGMVLVGLNVAFFFYTSML---------VWNVRRFDEKWESFCISALPYVTLLG 136
R LPL +G +L+ + F + +L VW + + K E F L LG
Sbjct: 127 RVLPLLMGFLLISCLLNFAYIVKILNDLKMKNDTVWRLNMY--KSEYFIKQLLLN---LG 181
Query: 137 VVSFFLLS 144
V+ FF LS
Sbjct: 182 VIFFFTLS 189
>sp|Q873A1|SEC31_NEUCR Protein transport protein sec31 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec31 PE=3 SV=1
Length = 1256
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 24 SGDDLEDDACSRPQPFSPSIPRAKTWVE 51
S DD A S+PQ S S+PRA W+E
Sbjct: 342 SDDDFFSKAASQPQAASFSLPRAPAWIE 369
>sp|Q8FV59|YEDZ_BRUSU Sulfoxide reductase heme-binding subunit YedZ OS=Brucella suis
biovar 1 (strain 1330) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|A9WW03|YEDZ_BRUSI Sulfoxide reductase heme-binding subunit YedZ OS=Brucella suis
(strain ATCC 23445 / NCTC 10510) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|A5VVQ3|YEDZ_BRUO2 Sulfoxide reductase heme-binding subunit YedZ OS=Brucella ovis
(strain ATCC 25840 / 63/290 / NCTC 10512) GN=yedZ PE=3
SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|Q8YD73|YEDZ_BRUME Sulfoxide reductase heme-binding subunit YedZ OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|C0RMD3|YEDZ_BRUMB Sulfoxide reductase heme-binding subunit YedZ OS=Brucella
melitensis biotype 2 (strain ATCC 23457) GN=yedZ PE=3
SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|A9MCR7|YEDZ_BRUC2 Sulfoxide reductase heme-binding subunit YedZ OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|Q579K4|YEDZ_BRUAB Sulfoxide reductase heme-binding subunit YedZ OS=Brucella abortus
biovar 1 (strain 9-941) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|Q2YIK1|YEDZ_BRUA2 Sulfoxide reductase heme-binding subunit YedZ OS=Brucella abortus
(strain 2308) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|B2SD40|YEDZ_BRUA1 Sulfoxide reductase heme-binding subunit YedZ OS=Brucella abortus
(strain S19) GN=yedZ PE=3 SV=1
Length = 220
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 15/107 (14%)
Query: 85 IRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLLS 144
+RR + +GM+ + L V ++ W++R+ +W S + L Y+ + G FL+S
Sbjct: 119 VRRPFITIGMISLALLVPLALTSNN--WSIRKLGRRWSS--LHKLVYIAIAGSAVHFLMS 174
Query: 145 FALWPIWSFLTLPLLFTLFMASMVI------FPHSMIGTLRPQNDAF 185
WP P+++ +A++++ + + LRP+ +A
Sbjct: 175 VKSWP-----AEPVIYAAIVAALLLWRLARPYLRTRKPALRPRGEAI 216
>sp|Q23022|ACH5_CAEEL Acetylcholine receptor subunit alpha-type unc-38 OS=Caenorhabditis
elegans GN=unc-38 PE=2 SV=1
Length = 511
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 84 RIRRLPLYLGMVLVGLNVAFFFYTSMLVWNVRRFDEKWESFCISALPYVTLLGVVSFFLL 143
++RR PL+ + LV V F T ++ + EK + CIS L +T+ FFLL
Sbjct: 252 QLRRKPLFYTVNLVFPCVGISFLTILVFYLPSDSGEK-VTLCISILVALTI-----FFLL 305
Query: 144 SFALWPIWSFLTLPLLFTLFMASMVIFPHSMIGTLRPQNDAFR 186
+ P S +TLPL+ + +MV+ S++ T+ N FR
Sbjct: 306 LTEIIPATS-ITLPLIGKYLLFTMVMVTLSVVVTVISLNLHFR 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.143 0.471
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,117,922
Number of Sequences: 539616
Number of extensions: 2985586
Number of successful extensions: 8318
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 8303
Number of HSP's gapped (non-prelim): 44
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)