Query 029780
Match_columns 188
No_of_seqs 175 out of 1895
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 05:08:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 2.2E-33 7.6E-38 213.2 20.6 180 2-188 42-221 (242)
2 3dr5_A Putative O-methyltransf 100.0 2.6E-33 9E-38 210.1 20.1 174 3-187 36-213 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 7.9E-33 2.7E-37 209.5 21.7 186 2-188 52-237 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 2.1E-32 7.1E-37 208.4 20.8 186 2-188 61-247 (247)
5 3tr6_A O-methyltransferase; ce 100.0 4.4E-31 1.5E-35 197.8 21.7 179 2-187 46-224 (225)
6 3cbg_A O-methyltransferase; cy 100.0 6.8E-31 2.3E-35 198.2 21.8 177 2-187 54-232 (232)
7 3duw_A OMT, O-methyltransferas 100.0 1.3E-30 4.4E-35 195.1 23.2 179 2-188 40-223 (223)
8 3ntv_A MW1564 protein; rossman 100.0 6.4E-31 2.2E-35 198.4 19.4 176 4-187 55-231 (232)
9 3tfw_A Putative O-methyltransf 100.0 2.6E-30 8.8E-35 196.9 22.7 177 2-188 45-226 (248)
10 2avd_A Catechol-O-methyltransf 100.0 6.3E-30 2.2E-34 192.0 22.9 179 2-187 51-229 (229)
11 2hnk_A SAM-dependent O-methylt 100.0 4.6E-28 1.6E-32 183.3 21.5 180 2-187 42-231 (239)
12 3c3p_A Methyltransferase; NP_9 100.0 1.5E-28 5.1E-33 182.5 18.5 171 3-187 39-209 (210)
13 3u81_A Catechol O-methyltransf 100.0 1.9E-27 6.6E-32 177.9 18.3 164 2-187 40-213 (221)
14 2gpy_A O-methyltransferase; st 99.9 1.1E-26 3.9E-31 174.9 17.6 179 3-188 37-215 (233)
15 3cvo_A Methyltransferase-like 99.8 4.4E-20 1.5E-24 135.4 14.4 149 2-175 14-182 (202)
16 2wk1_A NOVP; transferase, O-me 99.8 1.5E-19 5E-24 139.1 14.1 158 5-187 87-281 (282)
17 2bm8_A Cephalosporin hydroxyla 99.8 2.3E-18 7.8E-23 129.9 9.8 116 6-132 67-188 (236)
18 3e05_A Precorrin-6Y C5,15-meth 99.8 7.3E-18 2.5E-22 124.1 12.1 121 4-133 24-144 (204)
19 2b2c_A Spermidine synthase; be 99.8 6.4E-18 2.2E-22 132.4 11.9 150 18-187 106-269 (314)
20 3p9n_A Possible methyltransfer 99.8 8E-17 2.7E-21 117.2 17.0 116 10-133 32-155 (189)
21 3fpf_A Mtnas, putative unchara 99.8 1.1E-17 3.8E-22 129.2 12.9 106 15-132 117-223 (298)
22 3njr_A Precorrin-6Y methylase; 99.8 2.4E-17 8.1E-22 121.7 14.2 117 5-133 40-156 (204)
23 4gek_A TRNA (CMO5U34)-methyltr 99.8 1.9E-17 6.4E-22 126.7 13.7 116 10-134 58-181 (261)
24 2o07_A Spermidine synthase; st 99.7 1.1E-17 3.9E-22 130.5 12.1 147 19-186 94-255 (304)
25 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.6E-17 5.6E-22 119.3 10.7 117 8-133 13-129 (178)
26 2esr_A Methyltransferase; stru 99.7 3E-17 1E-21 118.1 12.0 108 18-133 29-140 (177)
27 3jwh_A HEN1; methyltransferase 99.7 9.6E-17 3.3E-21 119.1 14.5 167 6-180 15-194 (217)
28 3jwg_A HEN1, methyltransferase 99.7 1.1E-16 3.7E-21 118.9 14.3 168 5-180 14-194 (219)
29 2fhp_A Methylase, putative; al 99.7 1.4E-16 4.7E-21 115.3 13.6 110 19-133 43-156 (187)
30 1uir_A Polyamine aminopropyltr 99.7 1.5E-16 5.2E-21 124.7 14.7 150 18-186 75-241 (314)
31 3orh_A Guanidinoacetate N-meth 99.7 3.5E-17 1.2E-21 123.4 10.4 117 11-136 49-175 (236)
32 1mjf_A Spermidine synthase; sp 99.7 2.9E-16 1E-20 121.3 15.7 148 17-187 72-239 (281)
33 1xj5_A Spermidine synthase 1; 99.7 3.2E-16 1.1E-20 123.7 15.4 119 10-134 108-239 (334)
34 1xdz_A Methyltransferase GIDB; 99.7 5.4E-16 1.8E-20 117.0 15.8 105 19-130 69-173 (240)
35 1l3i_A Precorrin-6Y methyltran 99.7 3.6E-16 1.2E-20 113.1 14.2 120 4-133 17-136 (192)
36 2ift_A Putative methylase HI07 99.7 1.6E-16 5.5E-21 116.9 12.5 118 10-134 43-166 (201)
37 3mti_A RRNA methylase; SAM-dep 99.7 5.8E-16 2E-20 112.1 15.2 103 19-131 21-135 (185)
38 1ws6_A Methyltransferase; stru 99.7 6.4E-16 2.2E-20 110.1 15.0 106 20-133 41-149 (171)
39 3ajd_A Putative methyltransfer 99.7 8.8E-16 3E-20 118.2 16.4 122 9-134 72-214 (274)
40 2fpo_A Methylase YHHF; structu 99.7 5.4E-16 1.8E-20 114.2 13.3 106 19-133 53-162 (202)
41 3dxy_A TRNA (guanine-N(7)-)-me 99.7 3.9E-16 1.3E-20 116.3 12.4 105 20-130 34-149 (218)
42 1iy9_A Spermidine synthase; ro 99.7 2.3E-15 7.8E-20 115.9 17.0 106 19-131 74-189 (275)
43 1nkv_A Hypothetical protein YJ 99.7 1.7E-16 6E-21 120.3 10.6 117 8-134 24-143 (256)
44 3f4k_A Putative methyltransfer 99.7 1.1E-16 3.7E-21 121.5 9.4 116 10-134 36-153 (257)
45 3gjy_A Spermidine synthase; AP 99.7 6.2E-16 2.1E-20 120.7 13.3 106 19-131 86-200 (317)
46 3m6w_A RRNA methylase; rRNA me 99.7 1.4E-15 4.6E-20 124.6 15.6 119 8-134 89-232 (464)
47 3lpm_A Putative methyltransfer 99.7 2.5E-16 8.5E-21 120.2 10.4 114 9-129 37-174 (259)
48 3eey_A Putative rRNA methylase 99.7 1.7E-16 6E-21 115.9 9.2 109 17-131 19-139 (197)
49 3grz_A L11 mtase, ribosomal pr 99.7 1.6E-15 5.6E-20 111.4 14.3 114 8-133 47-161 (205)
50 3kkz_A Uncharacterized protein 99.7 1.2E-16 4E-21 122.2 8.4 108 18-134 44-153 (267)
51 1inl_A Spermidine synthase; be 99.7 2.4E-15 8.3E-20 116.9 15.5 107 18-131 88-205 (296)
52 2nxc_A L11 mtase, ribosomal pr 99.7 1.2E-14 4.1E-19 110.6 19.1 115 6-133 105-220 (254)
53 2b3t_A Protein methyltransfera 99.7 3.2E-15 1.1E-19 115.0 16.0 117 5-131 92-238 (276)
54 2ozv_A Hypothetical protein AT 99.7 2.1E-16 7.1E-21 120.8 8.9 119 11-130 27-169 (260)
55 3hem_A Cyclopropane-fatty-acyl 99.7 1.7E-15 5.8E-20 117.8 14.2 114 10-135 59-187 (302)
56 2igt_A SAM dependent methyltra 99.7 8.7E-15 3E-19 115.5 18.4 109 19-133 152-274 (332)
57 3mb5_A SAM-dependent methyltra 99.7 2.9E-16 9.9E-21 119.2 9.4 116 6-131 79-194 (255)
58 3g89_A Ribosomal RNA small sub 99.7 6.8E-16 2.3E-20 117.2 11.3 104 20-130 80-183 (249)
59 2pt6_A Spermidine synthase; tr 99.7 4.1E-15 1.4E-19 116.9 16.1 107 18-131 114-230 (321)
60 2yxd_A Probable cobalt-precorr 99.7 8E-15 2.7E-19 105.3 16.4 113 6-133 21-133 (183)
61 1dus_A MJ0882; hypothetical pr 99.7 8.8E-16 3E-20 111.3 11.4 112 11-133 43-159 (194)
62 3kr9_A SAM-dependent methyltra 99.7 5E-16 1.7E-20 115.8 10.2 113 12-132 6-120 (225)
63 3lbf_A Protein-L-isoaspartate 99.7 6.1E-16 2.1E-20 114.1 10.0 112 5-130 62-173 (210)
64 3lec_A NADB-rossmann superfami 99.7 2E-15 6.7E-20 112.8 12.7 112 12-131 12-125 (230)
65 4dzr_A Protein-(glutamine-N5) 99.7 5.1E-16 1.7E-20 114.4 9.5 121 4-130 10-164 (215)
66 2fca_A TRNA (guanine-N(7)-)-me 99.6 2.4E-15 8.4E-20 111.5 13.0 105 19-130 37-152 (213)
67 3dh0_A SAM dependent methyltra 99.6 5.1E-15 1.7E-19 109.7 14.3 112 16-135 33-147 (219)
68 3adn_A Spermidine synthase; am 99.6 1.4E-15 4.8E-20 118.1 11.4 107 18-131 81-198 (294)
69 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.5E-15 5.1E-20 112.6 11.1 104 20-130 41-155 (214)
70 1zx0_A Guanidinoacetate N-meth 99.6 1.3E-15 4.4E-20 114.5 10.8 116 10-134 48-173 (236)
71 3dlc_A Putative S-adenosyl-L-m 99.6 8.4E-16 2.9E-20 113.5 9.6 116 10-134 31-151 (219)
72 3m4x_A NOL1/NOP2/SUN family pr 99.6 4.3E-15 1.5E-19 121.4 14.7 120 8-134 93-237 (456)
73 3evz_A Methyltransferase; NYSG 99.6 3.1E-15 1.1E-19 111.8 12.7 137 18-184 53-212 (230)
74 2b78_A Hypothetical protein SM 99.6 6.6E-15 2.3E-19 118.4 15.1 110 19-133 211-333 (385)
75 3a27_A TYW2, uncharacterized p 99.6 9.4E-16 3.2E-20 117.9 9.7 119 5-134 104-222 (272)
76 1nv8_A HEMK protein; class I a 99.6 4.7E-15 1.6E-19 114.7 13.6 115 5-130 105-248 (284)
77 3c0k_A UPF0064 protein YCCW; P 99.6 7.9E-15 2.7E-19 118.4 15.1 114 15-133 215-341 (396)
78 2i7c_A Spermidine synthase; tr 99.6 3E-14 1E-18 110.1 17.7 115 10-131 66-192 (283)
79 3gu3_A Methyltransferase; alph 99.6 9.2E-16 3.1E-20 118.5 9.1 113 11-133 13-128 (284)
80 1sqg_A SUN protein, FMU protei 99.6 1.4E-14 4.8E-19 118.0 16.5 121 6-134 232-377 (429)
81 1ixk_A Methyltransferase; open 99.6 2.8E-15 9.5E-20 117.6 11.7 120 7-134 105-249 (315)
82 2pbf_A Protein-L-isoaspartate 99.6 2.3E-15 8E-20 112.3 10.8 116 9-130 68-192 (227)
83 4htf_A S-adenosylmethionine-de 99.6 4.1E-15 1.4E-19 114.7 12.4 103 21-132 69-174 (285)
84 3g07_A 7SK snRNA methylphospha 99.6 1.1E-15 3.8E-20 118.6 9.3 114 19-135 45-224 (292)
85 1jsx_A Glucose-inhibited divis 99.6 2.1E-15 7.1E-20 110.9 10.2 100 20-130 65-164 (207)
86 2frn_A Hypothetical protein PH 99.6 5.2E-15 1.8E-19 114.1 12.7 105 19-134 124-228 (278)
87 2as0_A Hypothetical protein PH 99.6 6.6E-15 2.3E-19 118.8 13.6 109 20-133 217-337 (396)
88 3bus_A REBM, methyltransferase 99.6 3.2E-15 1.1E-19 114.4 11.0 119 8-135 46-170 (273)
89 3ckk_A TRNA (guanine-N(7)-)-me 99.6 4.1E-15 1.4E-19 112.0 11.2 107 18-130 44-167 (235)
90 3gnl_A Uncharacterized protein 99.6 2.7E-15 9.1E-20 113.0 10.1 112 12-131 12-125 (244)
91 3g5t_A Trans-aconitate 3-methy 99.6 6.2E-15 2.1E-19 114.5 12.4 109 19-129 35-147 (299)
92 3sso_A Methyltransferase; macr 99.6 3E-14 1E-18 113.9 16.2 153 20-187 216-392 (419)
93 1dl5_A Protein-L-isoaspartate 99.6 3E-15 1E-19 117.5 10.0 114 7-131 62-175 (317)
94 2yxl_A PH0851 protein, 450AA l 99.6 8.1E-15 2.8E-19 120.1 12.9 122 7-134 246-392 (450)
95 1u2z_A Histone-lysine N-methyl 99.6 1.2E-14 4.1E-19 117.9 13.6 115 15-136 237-364 (433)
96 3fzg_A 16S rRNA methylase; met 99.6 4.1E-14 1.4E-18 102.2 14.9 159 7-188 35-198 (200)
97 2yxe_A Protein-L-isoaspartate 99.6 4.1E-15 1.4E-19 110.0 10.0 115 6-131 63-177 (215)
98 4df3_A Fibrillarin-like rRNA/T 99.6 2.3E-15 7.9E-20 112.8 8.6 106 18-130 75-181 (233)
99 2o57_A Putative sarcosine dime 99.6 4.1E-15 1.4E-19 115.3 10.2 109 17-134 79-190 (297)
100 1wxx_A TT1595, hypothetical pr 99.6 7.9E-15 2.7E-19 117.9 12.2 107 20-133 209-327 (382)
101 1xxl_A YCGJ protein; structura 99.6 7.1E-15 2.4E-19 110.7 11.2 115 9-134 10-127 (239)
102 2fk8_A Methoxy mycolic acid sy 99.6 8E-15 2.7E-19 114.8 11.9 114 10-135 77-198 (318)
103 1kpg_A CFA synthase;, cyclopro 99.6 9.2E-15 3.1E-19 112.7 12.0 114 10-135 51-172 (287)
104 3mgg_A Methyltransferase; NYSG 99.6 3.3E-15 1.1E-19 114.6 9.4 107 19-134 36-145 (276)
105 1o54_A SAM-dependent O-methylt 99.6 3.3E-15 1.1E-19 114.9 9.3 113 10-132 102-214 (277)
106 1vl5_A Unknown conserved prote 99.6 5.9E-15 2E-19 112.3 10.5 107 17-134 34-143 (260)
107 3ocj_A Putative exported prote 99.6 1.9E-15 6.4E-20 117.9 7.8 109 18-134 116-230 (305)
108 2frx_A Hypothetical protein YE 99.6 3.4E-14 1.2E-18 117.1 15.5 120 8-134 103-249 (479)
109 3lcc_A Putative methyl chlorid 99.6 9.1E-15 3.1E-19 109.6 11.1 104 20-134 66-174 (235)
110 3gdh_A Trimethylguanosine synt 99.6 7.7E-16 2.6E-20 115.9 5.2 112 9-131 67-181 (241)
111 3vc1_A Geranyl diphosphate 2-C 99.6 2.2E-15 7.7E-20 117.8 7.7 109 18-135 115-225 (312)
112 1pjz_A Thiopurine S-methyltran 99.6 4.5E-15 1.5E-19 109.3 8.7 102 19-129 21-138 (203)
113 2gb4_A Thiopurine S-methyltran 99.6 1.1E-14 3.6E-19 110.8 11.0 115 7-130 55-190 (252)
114 3htx_A HEN1; HEN1, small RNA m 99.6 7.7E-14 2.6E-18 119.7 17.2 157 13-180 714-900 (950)
115 2vdv_E TRNA (guanine-N(7)-)-me 99.6 7.2E-15 2.4E-19 111.2 9.9 105 20-130 49-172 (246)
116 1i1n_A Protein-L-isoaspartate 99.6 5.9E-15 2E-19 110.0 9.2 114 8-131 64-182 (226)
117 3dtn_A Putative methyltransfer 99.6 3E-15 1E-19 112.1 7.4 105 18-134 42-151 (234)
118 2b25_A Hypothetical protein; s 99.6 7E-15 2.4E-19 116.1 9.9 116 9-131 94-219 (336)
119 3bwc_A Spermidine synthase; SA 99.6 2.8E-14 9.5E-19 111.4 13.0 107 19-131 94-210 (304)
120 3v97_A Ribosomal RNA large sub 99.6 4.5E-14 1.5E-18 121.3 15.3 113 13-133 532-659 (703)
121 3uwp_A Histone-lysine N-methyl 99.6 4.3E-14 1.5E-18 113.3 14.1 116 15-136 168-293 (438)
122 3ofk_A Nodulation protein S; N 99.6 3.9E-15 1.3E-19 110.2 7.6 109 10-132 41-155 (216)
123 4dmg_A Putative uncharacterize 99.6 2.6E-14 9E-19 115.0 12.9 103 20-133 214-328 (393)
124 2p7i_A Hypothetical protein; p 99.6 5.5E-15 1.9E-19 111.1 8.5 109 9-133 31-143 (250)
125 4dcm_A Ribosomal RNA large sub 99.6 5.6E-15 1.9E-19 118.4 8.8 104 18-130 220-333 (375)
126 3k6r_A Putative transferase PH 99.6 5.6E-15 1.9E-19 113.6 8.2 106 17-133 122-227 (278)
127 2pwy_A TRNA (adenine-N(1)-)-me 99.6 8.7E-15 3E-19 111.0 9.2 111 11-131 87-198 (258)
128 3h2b_A SAM-dependent methyltra 99.6 9.1E-14 3.1E-18 101.8 14.3 110 8-134 30-144 (203)
129 1nt2_A Fibrillarin-like PRE-rR 99.6 1.7E-14 5.8E-19 106.9 10.4 104 19-130 56-160 (210)
130 2ex4_A Adrenal gland protein A 99.6 7.1E-15 2.4E-19 110.7 8.5 117 8-134 63-188 (241)
131 3m70_A Tellurite resistance pr 99.6 3.8E-14 1.3E-18 109.3 12.6 110 10-133 111-225 (286)
132 1jg1_A PIMT;, protein-L-isoasp 99.6 1.3E-14 4.3E-19 109.0 9.7 113 6-131 77-189 (235)
133 1g8a_A Fibrillarin-like PRE-rR 99.6 1E-14 3.5E-19 108.9 9.0 106 18-130 71-177 (227)
134 1i9g_A Hypothetical protein RV 99.6 1.2E-14 4.1E-19 111.7 9.5 116 8-132 87-204 (280)
135 1yb2_A Hypothetical protein TA 99.6 3.5E-15 1.2E-19 114.8 6.4 108 14-132 104-212 (275)
136 3dmg_A Probable ribosomal RNA 99.6 2E-14 7E-19 115.3 11.0 114 5-130 213-339 (381)
137 3tma_A Methyltransferase; thum 99.6 2.8E-14 9.4E-19 113.5 11.7 118 5-130 188-316 (354)
138 2xvm_A Tellurite resistance pr 99.6 4.6E-14 1.6E-18 102.8 11.8 107 15-133 27-138 (199)
139 3thr_A Glycine N-methyltransfe 99.6 5.9E-14 2E-18 108.5 12.9 119 7-132 44-176 (293)
140 2yvl_A TRMI protein, hypotheti 99.6 2.1E-14 7E-19 108.3 10.0 114 6-131 77-190 (248)
141 1fbn_A MJ fibrillarin homologu 99.5 1.2E-14 4.1E-19 108.9 7.9 105 18-130 72-177 (230)
142 2kw5_A SLR1183 protein; struct 99.5 4.3E-14 1.5E-18 103.5 10.6 111 12-134 21-134 (202)
143 1r18_A Protein-L-isoaspartate( 99.5 6.3E-15 2.1E-19 110.1 6.1 113 8-130 71-193 (227)
144 1vbf_A 231AA long hypothetical 99.5 2.8E-14 9.7E-19 106.6 9.7 110 6-131 56-165 (231)
145 3bkx_A SAM-dependent methyltra 99.5 5.7E-14 2E-18 107.5 11.4 112 18-134 41-162 (275)
146 3ujc_A Phosphoethanolamine N-m 99.5 5.9E-15 2E-19 112.2 5.8 105 18-134 53-162 (266)
147 3id6_C Fibrillarin-like rRNA/T 99.5 9.4E-14 3.2E-18 104.1 12.1 106 18-130 74-180 (232)
148 1wzn_A SAM-dependent methyltra 99.5 6.9E-14 2.4E-18 105.7 11.5 110 9-131 27-145 (252)
149 3dp7_A SAM-dependent methyltra 99.5 5.3E-14 1.8E-18 112.3 11.3 110 19-136 178-292 (363)
150 4hg2_A Methyltransferase type 99.5 9E-15 3.1E-19 111.5 6.2 105 10-131 28-135 (257)
151 4fsd_A Arsenic methyltransfera 99.5 2.2E-14 7.5E-19 115.3 8.8 116 18-134 81-206 (383)
152 2dul_A N(2),N(2)-dimethylguano 99.5 1.9E-13 6.5E-18 109.5 13.9 105 18-131 45-164 (378)
153 1y8c_A S-adenosylmethionine-de 99.5 6.3E-14 2.2E-18 105.2 10.2 109 9-130 24-141 (246)
154 2p8j_A S-adenosylmethionine-de 99.5 3.5E-14 1.2E-18 104.3 8.6 118 5-133 8-130 (209)
155 3axs_A Probable N(2),N(2)-dime 99.5 1.4E-13 4.8E-18 110.5 12.7 106 19-131 51-158 (392)
156 2ipx_A RRNA 2'-O-methyltransfe 99.5 5.4E-14 1.9E-18 105.4 9.7 104 18-130 75-181 (233)
157 3r0q_C Probable protein argini 99.5 4E-14 1.4E-18 113.5 9.5 106 17-133 60-171 (376)
158 2yx1_A Hypothetical protein MJ 99.5 1.2E-13 4E-18 109.2 12.1 102 18-134 193-294 (336)
159 3q7e_A Protein arginine N-meth 99.5 6.6E-14 2.3E-18 111.2 10.6 105 17-131 63-173 (349)
160 3dli_A Methyltransferase; PSI- 99.5 3.6E-14 1.2E-18 106.7 8.6 99 18-133 39-142 (240)
161 2qfm_A Spermine synthase; sper 99.5 1.6E-13 5.4E-18 108.5 12.5 109 20-133 188-316 (364)
162 3ou2_A SAM-dependent methyltra 99.5 4.7E-14 1.6E-18 104.1 9.0 110 9-134 35-149 (218)
163 1ve3_A Hypothetical protein PH 99.5 8.7E-14 3E-18 103.4 10.5 103 19-133 37-144 (227)
164 3e8s_A Putative SAM dependent 99.5 1.6E-13 5.4E-18 101.7 11.8 105 16-133 48-154 (227)
165 2cmg_A Spermidine synthase; tr 99.5 2.6E-14 8.7E-19 109.3 7.4 97 19-130 71-170 (262)
166 2fyt_A Protein arginine N-meth 99.5 9.7E-14 3.3E-18 109.9 10.8 103 17-129 61-169 (340)
167 2r3s_A Uncharacterized protein 99.5 7E-13 2.4E-17 104.3 15.6 106 19-134 164-274 (335)
168 1o9g_A RRNA methyltransferase; 99.5 1.7E-14 5.7E-19 109.4 5.6 120 10-132 38-215 (250)
169 1ri5_A MRNA capping enzyme; me 99.5 1.5E-13 5.3E-18 106.1 11.1 106 19-132 63-175 (298)
170 1g6q_1 HnRNP arginine N-methyl 99.5 2.2E-13 7.6E-18 107.3 12.1 106 15-130 33-144 (328)
171 3mcz_A O-methyltransferase; ad 99.5 1.6E-13 5.4E-18 108.9 11.3 108 21-136 180-292 (352)
172 3hnr_A Probable methyltransfer 99.5 4.7E-14 1.6E-18 104.5 7.8 109 9-134 35-148 (220)
173 3g5l_A Putative S-adenosylmeth 99.5 4E-14 1.4E-18 107.2 7.5 98 20-130 44-144 (253)
174 2h00_A Methyltransferase 10 do 99.5 1.9E-14 6.4E-19 109.2 5.6 97 6-105 46-148 (254)
175 3pfg_A N-methyltransferase; N, 99.5 8.8E-14 3E-18 105.9 9.4 106 10-132 39-152 (263)
176 3i9f_A Putative type 11 methyl 99.5 2.9E-13 9.8E-18 96.4 11.0 100 17-135 14-116 (170)
177 2yqz_A Hypothetical protein TT 99.5 1.3E-13 4.4E-18 104.6 9.7 101 18-130 37-140 (263)
178 2p35_A Trans-aconitate 2-methy 99.5 5.5E-14 1.9E-18 106.6 7.6 99 18-131 31-132 (259)
179 3sm3_A SAM-dependent methyltra 99.5 8.4E-14 2.9E-18 103.8 8.2 105 18-132 28-142 (235)
180 3g2m_A PCZA361.24; SAM-depende 99.5 5.1E-14 1.8E-18 109.3 7.2 104 20-134 82-193 (299)
181 3p2e_A 16S rRNA methylase; met 99.5 6.2E-14 2.1E-18 104.9 7.4 103 19-129 23-137 (225)
182 3gwz_A MMCR; methyltransferase 99.5 2.3E-13 8E-18 108.8 11.1 107 19-136 201-312 (369)
183 3i53_A O-methyltransferase; CO 99.5 1.4E-13 4.8E-18 108.4 9.5 106 20-136 169-279 (332)
184 3m33_A Uncharacterized protein 99.5 2.7E-14 9.2E-19 106.7 5.1 102 9-128 35-139 (226)
185 1x19_A CRTF-related protein; m 99.5 9E-13 3.1E-17 104.9 14.0 107 18-135 188-299 (359)
186 3q87_B N6 adenine specific DNA 99.5 7.5E-13 2.6E-17 94.7 12.2 105 3-131 5-123 (170)
187 3d2l_A SAM-dependent methyltra 99.5 3.2E-13 1.1E-17 101.3 10.6 107 10-130 22-136 (243)
188 2vdw_A Vaccinia virus capping 99.5 3.5E-13 1.2E-17 105.0 10.9 107 20-132 48-170 (302)
189 3bkw_A MLL3908 protein, S-aden 99.5 1.1E-13 3.9E-18 103.8 7.8 107 12-131 35-144 (243)
190 2y1w_A Histone-arginine methyl 99.5 2.6E-13 8.9E-18 107.7 10.2 102 18-130 48-154 (348)
191 3e23_A Uncharacterized protein 99.5 1.4E-13 4.9E-18 101.4 7.9 100 17-134 40-144 (211)
192 3ege_A Putative methyltransfer 99.5 6E-14 2.1E-18 106.9 5.9 110 6-133 20-132 (261)
193 2ip2_A Probable phenazine-spec 99.5 3.1E-13 1E-17 106.5 10.0 103 22-135 169-276 (334)
194 1xtp_A LMAJ004091AAA; SGPP, st 99.5 1.9E-13 6.5E-18 103.3 8.3 103 19-133 92-199 (254)
195 3bt7_A TRNA (uracil-5-)-methyl 99.4 1.2E-12 4.2E-17 104.6 13.2 123 3-132 193-327 (369)
196 1tw3_A COMT, carminomycin 4-O- 99.4 2.2E-13 7.5E-18 108.3 8.8 104 19-133 182-290 (360)
197 4hc4_A Protein arginine N-meth 99.4 5.4E-13 1.8E-17 106.6 10.9 105 17-132 80-190 (376)
198 1qzz_A RDMB, aclacinomycin-10- 99.4 3.6E-13 1.2E-17 107.6 10.0 103 19-132 181-288 (374)
199 3ccf_A Cyclopropane-fatty-acyl 99.4 1.6E-13 5.5E-18 105.5 7.6 100 16-132 53-155 (279)
200 3tm4_A TRNA (guanine N2-)-meth 99.4 6.1E-13 2.1E-17 106.5 11.2 108 5-121 203-321 (373)
201 2b9e_A NOL1/NOP2/SUN domain fa 99.4 1.4E-12 4.8E-17 101.8 12.9 119 9-133 91-236 (309)
202 2qm3_A Predicted methyltransfe 99.4 7.8E-13 2.7E-17 105.9 11.7 103 20-130 172-277 (373)
203 3l8d_A Methyltransferase; stru 99.4 3.6E-13 1.2E-17 101.0 9.2 101 18-132 51-154 (242)
204 2qe6_A Uncharacterized protein 99.4 1.6E-12 5.5E-17 99.9 12.8 110 20-134 77-199 (274)
205 2aot_A HMT, histamine N-methyl 99.4 1.1E-12 3.8E-17 101.5 11.7 109 20-131 52-172 (292)
206 3iv6_A Putative Zn-dependent a 99.4 3.5E-13 1.2E-17 102.7 8.6 103 15-131 40-148 (261)
207 2pjd_A Ribosomal RNA small sub 99.4 3.1E-13 1.1E-17 107.1 8.7 101 19-131 195-303 (343)
208 3ggd_A SAM-dependent methyltra 99.4 5.8E-13 2E-17 100.3 9.8 106 18-133 54-165 (245)
209 3bzb_A Uncharacterized protein 99.4 1.5E-12 5.2E-17 100.4 12.2 115 8-129 64-203 (281)
210 3mq2_A 16S rRNA methyltransfer 99.4 4.9E-13 1.7E-17 99.1 9.0 104 17-130 24-139 (218)
211 2jjq_A Uncharacterized RNA met 99.4 1.4E-12 4.9E-17 106.0 12.4 114 3-131 272-387 (425)
212 1wy7_A Hypothetical protein PH 99.4 3.8E-12 1.3E-16 93.4 13.3 111 4-130 30-148 (207)
213 3bgv_A MRNA CAP guanine-N7 met 99.4 8.5E-13 2.9E-17 103.1 10.2 108 20-132 34-156 (313)
214 3b3j_A Histone-arginine methyl 99.4 8.6E-13 2.9E-17 108.8 10.5 100 19-129 157-261 (480)
215 3cgg_A SAM-dependent methyltra 99.4 1E-12 3.5E-17 95.0 9.6 105 10-132 38-148 (195)
216 3bxo_A N,N-dimethyltransferase 99.4 1.1E-12 3.9E-17 98.1 10.1 99 19-134 39-144 (239)
217 2pxx_A Uncharacterized protein 99.4 2.4E-13 8.2E-18 100.0 6.2 103 19-133 41-161 (215)
218 2i62_A Nicotinamide N-methyltr 99.4 1.1E-13 3.8E-18 105.1 4.2 110 19-133 55-200 (265)
219 3tos_A CALS11; methyltransfera 99.4 1.5E-11 5.3E-16 93.0 15.7 148 19-184 68-253 (257)
220 1ej0_A FTSJ; methyltransferase 99.4 7.6E-13 2.6E-17 94.1 8.1 99 18-132 20-137 (180)
221 2gs9_A Hypothetical protein TT 99.4 3.4E-13 1.1E-17 99.3 6.4 97 20-134 36-135 (211)
222 1uwv_A 23S rRNA (uracil-5-)-me 99.4 3.1E-12 1.1E-16 104.3 12.3 117 7-131 270-389 (433)
223 1ne2_A Hypothetical protein TA 99.4 4.3E-12 1.5E-16 92.7 11.9 107 4-130 32-146 (200)
224 1zq9_A Probable dimethyladenos 99.4 3.6E-12 1.2E-16 98.5 10.3 93 5-109 13-105 (285)
225 2avn_A Ubiquinone/menaquinone 99.4 1.5E-12 5.2E-17 99.0 7.9 96 20-132 54-153 (260)
226 1p91_A Ribosomal RNA large sub 99.4 3.1E-12 1E-16 97.7 9.1 96 19-132 84-179 (269)
227 3o4f_A Spermidine synthase; am 99.3 2.9E-12 9.9E-17 98.8 8.4 108 17-131 80-198 (294)
228 2qy6_A UPF0209 protein YFCK; s 99.3 4.7E-12 1.6E-16 96.3 9.1 108 20-129 60-211 (257)
229 2a14_A Indolethylamine N-methy 99.3 4.6E-13 1.6E-17 102.2 3.3 110 19-133 54-199 (263)
230 2f8l_A Hypothetical protein LM 99.3 3E-12 1E-16 101.4 7.9 117 4-130 110-255 (344)
231 1vlm_A SAM-dependent methyltra 99.3 3.5E-12 1.2E-16 94.6 7.7 103 9-133 36-141 (219)
232 4e2x_A TCAB9; kijanose, tetron 99.3 1.9E-12 6.6E-17 104.9 6.8 101 19-132 106-209 (416)
233 2plw_A Ribosomal RNA methyltra 99.3 7.9E-12 2.7E-16 91.2 9.2 99 19-130 21-153 (201)
234 4a6d_A Hydroxyindole O-methylt 99.3 5.4E-11 1.8E-15 94.5 14.4 106 18-135 177-287 (353)
235 2g72_A Phenylethanolamine N-me 99.3 5.3E-12 1.8E-16 97.4 7.8 111 20-133 71-217 (289)
236 3dou_A Ribosomal RNA large sub 99.3 1.5E-11 5.3E-16 89.5 9.3 107 9-130 11-138 (191)
237 2h1r_A Dimethyladenosine trans 99.3 1.3E-11 4.5E-16 96.0 9.4 95 5-112 27-121 (299)
238 3opn_A Putative hemolysin; str 99.3 1.3E-12 4.3E-17 98.2 3.5 98 20-130 37-136 (232)
239 2r6z_A UPF0341 protein in RSP 99.3 3.5E-12 1.2E-16 97.2 5.9 91 9-105 72-169 (258)
240 3cc8_A Putative methyltransfer 99.3 4.9E-12 1.7E-16 93.8 6.1 99 19-133 31-132 (230)
241 3lst_A CALO1 methyltransferase 99.3 5.4E-12 1.8E-16 100.0 6.5 104 19-136 183-291 (348)
242 3c6k_A Spermine synthase; sper 99.3 6.3E-11 2.1E-15 94.1 12.4 148 18-187 203-378 (381)
243 2nyu_A Putative ribosomal RNA 99.3 5.6E-11 1.9E-15 86.3 11.1 101 18-131 20-145 (196)
244 3hp7_A Hemolysin, putative; st 99.3 7.3E-12 2.5E-16 96.7 6.6 99 20-130 85-184 (291)
245 3giw_A Protein of unknown func 99.3 3.5E-11 1.2E-15 91.9 9.9 120 13-134 71-203 (277)
246 3gru_A Dimethyladenosine trans 99.2 1E-10 3.5E-15 90.6 12.2 100 6-118 36-135 (295)
247 3reo_A (ISO)eugenol O-methyltr 99.2 3.5E-11 1.2E-15 96.1 8.8 98 20-136 203-305 (368)
248 3ll7_A Putative methyltransfer 99.2 2.5E-11 8.6E-16 97.8 7.3 77 20-105 93-171 (410)
249 3k0b_A Predicted N6-adenine-sp 99.2 3.9E-11 1.3E-15 96.6 8.3 116 6-129 187-348 (393)
250 2zfu_A Nucleomethylin, cerebra 99.2 1.4E-11 4.8E-16 90.9 5.3 95 10-133 57-153 (215)
251 3p9c_A Caffeic acid O-methyltr 99.2 1.5E-10 5.2E-15 92.3 11.6 99 19-136 200-303 (364)
252 1af7_A Chemotaxis receptor met 99.2 4.5E-11 1.5E-15 91.8 7.8 105 20-130 105-251 (274)
253 2okc_A Type I restriction enzy 99.2 1.7E-11 5.7E-16 100.4 5.6 118 4-129 155-305 (445)
254 1m6y_A S-adenosyl-methyltransf 99.2 1.5E-10 5.2E-15 89.9 10.7 87 17-108 23-109 (301)
255 3lcv_B Sisomicin-gentamicin re 99.2 1.4E-10 4.6E-15 87.6 9.9 144 19-186 131-280 (281)
256 4azs_A Methyltransferase WBDD; 99.2 1E-10 3.5E-15 98.5 10.3 103 18-129 64-171 (569)
257 2ih2_A Modification methylase 99.2 2.9E-11 9.9E-16 97.9 6.7 109 4-130 23-163 (421)
258 3ldg_A Putative uncharacterize 99.2 1.1E-10 3.6E-15 93.8 9.6 115 7-129 181-341 (384)
259 3ldu_A Putative methylase; str 99.2 5.2E-11 1.8E-15 95.7 7.4 113 9-129 184-342 (385)
260 1fp1_D Isoliquiritigenin 2'-O- 99.2 3.8E-11 1.3E-15 96.0 6.2 98 19-135 208-310 (372)
261 3tqs_A Ribosomal RNA small sub 99.2 1.8E-10 6.2E-15 87.5 9.5 103 5-118 14-117 (255)
262 1fp2_A Isoflavone O-methyltran 99.1 7.8E-11 2.7E-15 93.5 7.2 99 18-135 186-292 (352)
263 3frh_A 16S rRNA methylase; met 99.1 2.1E-09 7.2E-14 80.3 14.3 144 17-187 102-251 (253)
264 2ar0_A M.ecoki, type I restric 99.1 2.5E-10 8.6E-15 95.4 9.3 120 4-129 153-310 (541)
265 2oyr_A UPF0341 protein YHIQ; a 99.1 2.6E-11 9E-16 92.2 3.1 84 14-106 80-173 (258)
266 4fzv_A Putative methyltransfer 99.1 1.2E-09 4.2E-14 86.6 11.8 120 8-134 136-287 (359)
267 1zg3_A Isoflavanone 4'-O-methy 99.1 3.2E-10 1.1E-14 90.1 7.4 98 18-134 191-296 (358)
268 3fut_A Dimethyladenosine trans 99.0 1.2E-09 4.1E-14 83.7 9.6 111 6-130 33-144 (271)
269 1qam_A ERMC' methyltransferase 99.0 1.5E-09 5.1E-14 81.9 9.5 63 16-84 26-88 (244)
270 2xyq_A Putative 2'-O-methyl tr 99.0 7.1E-10 2.4E-14 85.6 7.2 90 18-131 61-171 (290)
271 2wa2_A Non-structural protein 99.0 7.8E-11 2.7E-15 90.6 1.6 98 19-130 81-192 (276)
272 2p41_A Type II methyltransfera 99.0 5.9E-10 2E-14 86.8 5.6 96 19-130 81-190 (305)
273 2oxt_A Nucleoside-2'-O-methylt 99.0 1.1E-10 3.6E-15 89.3 1.2 99 19-131 73-185 (265)
274 3uzu_A Ribosomal RNA small sub 98.9 6.4E-09 2.2E-13 79.9 9.9 106 6-118 28-135 (279)
275 3khk_A Type I restriction-modi 98.9 8.2E-10 2.8E-14 92.3 3.6 119 4-129 229-393 (544)
276 3ftd_A Dimethyladenosine trans 98.9 1.4E-08 4.6E-13 76.9 9.8 111 6-130 17-130 (249)
277 3lkd_A Type I restriction-modi 98.9 6.6E-09 2.3E-13 86.7 8.5 121 4-129 201-356 (542)
278 1qyr_A KSGA, high level kasuga 98.9 1.3E-08 4.4E-13 77.2 9.4 105 5-118 6-111 (252)
279 1yub_A Ermam, rRNA methyltrans 98.8 1.3E-10 4.6E-15 87.7 -2.2 108 10-130 19-144 (245)
280 3v97_A Ribosomal RNA large sub 98.8 5.8E-09 2E-13 89.7 7.4 118 7-129 177-345 (703)
281 4gqb_A Protein arginine N-meth 98.8 1.4E-08 4.7E-13 85.9 7.3 99 22-129 359-465 (637)
282 3s1s_A Restriction endonucleas 98.7 6.1E-08 2.1E-12 83.5 10.7 121 3-129 298-463 (878)
283 3ua3_A Protein arginine N-meth 98.7 3.8E-08 1.3E-12 83.5 8.2 106 21-129 410-532 (745)
284 2ld4_A Anamorsin; methyltransf 98.7 7.1E-09 2.4E-13 74.0 3.0 90 18-133 10-103 (176)
285 1wg8_A Predicted S-adenosylmet 98.7 1.6E-07 5.4E-12 71.7 10.1 84 17-110 19-102 (285)
286 2oo3_A Protein involved in cat 98.7 6.1E-08 2.1E-12 74.0 7.3 112 8-129 80-196 (283)
287 2k4m_A TR8_protein, UPF0146 pr 98.6 4.2E-07 1.4E-11 62.5 9.1 85 20-130 35-120 (153)
288 3ufb_A Type I restriction-modi 98.3 1.8E-06 6.1E-11 72.0 8.1 121 4-129 201-360 (530)
289 3tka_A Ribosomal RNA small sub 98.3 4.7E-06 1.6E-10 65.1 9.3 86 18-109 55-140 (347)
290 4auk_A Ribosomal RNA large sub 98.1 1.9E-05 6.5E-10 62.6 9.5 72 18-107 209-280 (375)
291 2zig_A TTHA0409, putative modi 98.0 3.1E-05 1.1E-09 59.8 9.0 57 10-69 223-281 (297)
292 3evf_A RNA-directed RNA polyme 98.0 2.9E-06 9.8E-11 64.4 2.8 102 18-130 72-183 (277)
293 3pvc_A TRNA 5-methylaminomethy 98.0 1.6E-05 5.3E-10 68.3 7.3 109 20-130 58-210 (689)
294 1i4w_A Mitochondrial replicati 97.9 3.1E-05 1E-09 61.2 7.5 59 21-84 59-117 (353)
295 3gcz_A Polyprotein; flavivirus 97.9 5.5E-06 1.9E-10 63.0 2.7 102 18-130 88-200 (282)
296 3vyw_A MNMC2; tRNA wobble urid 97.8 0.00021 7.3E-09 55.2 10.6 106 19-129 95-224 (308)
297 3eld_A Methyltransferase; flav 97.6 5.3E-05 1.8E-09 58.0 4.6 100 19-130 80-190 (300)
298 2px2_A Genome polyprotein [con 97.6 1.3E-05 4.5E-10 60.1 1.1 96 18-130 71-182 (269)
299 3p8z_A Mtase, non-structural p 97.6 0.00058 2E-08 50.7 9.7 100 18-130 76-185 (267)
300 1g60_A Adenine-specific methyl 97.6 0.00018 6.1E-09 54.4 7.2 57 10-69 200-258 (260)
301 3b5i_A S-adenosyl-L-methionine 97.5 0.00056 1.9E-08 54.5 9.7 19 21-39 53-71 (374)
302 3ps9_A TRNA 5-methylaminomethy 97.5 0.00074 2.5E-08 57.8 10.4 107 22-130 68-218 (676)
303 2efj_A 3,7-dimethylxanthine me 97.4 0.00023 7.8E-09 56.8 5.8 77 21-104 53-156 (384)
304 1pqw_A Polyketide synthase; ro 97.4 0.00048 1.6E-08 49.6 6.8 101 17-131 35-137 (198)
305 2py6_A Methyltransferase FKBM; 97.4 0.00061 2.1E-08 55.0 8.0 49 19-67 225-274 (409)
306 1f8f_A Benzyl alcohol dehydrog 97.4 0.00069 2.4E-08 53.7 8.2 103 17-132 187-290 (371)
307 3s2e_A Zinc-containing alcohol 97.4 0.001 3.4E-08 52.1 9.0 101 17-132 163-264 (340)
308 2dph_A Formaldehyde dismutase; 97.3 0.00096 3.3E-08 53.4 8.6 107 16-132 181-300 (398)
309 3lkz_A Non-structural protein 97.2 0.0011 3.9E-08 50.7 7.6 101 18-130 92-203 (321)
310 4eez_A Alcohol dehydrogenase 1 97.2 0.0057 2E-07 47.8 11.8 104 17-132 160-264 (348)
311 3fpc_A NADP-dependent alcohol 97.2 0.0022 7.4E-08 50.4 9.3 106 16-133 162-268 (352)
312 1pl8_A Human sorbitol dehydrog 97.2 0.0039 1.3E-07 49.1 10.7 102 16-131 167-273 (356)
313 3r24_A NSP16, 2'-O-methyl tran 97.1 0.0016 5.4E-08 49.9 7.2 89 19-130 108-216 (344)
314 1m6e_X S-adenosyl-L-methionnin 97.1 7.3E-05 2.5E-09 59.2 -0.3 106 22-131 53-209 (359)
315 4a2c_A Galactitol-1-phosphate 97.1 0.0062 2.1E-07 47.5 10.8 106 16-133 156-262 (346)
316 3jv7_A ADH-A; dehydrogenase, n 97.1 0.0028 9.7E-08 49.6 8.8 104 17-133 168-272 (345)
317 4ej6_A Putative zinc-binding d 97.0 0.0019 6.6E-08 51.2 7.7 108 15-132 177-285 (370)
318 1kol_A Formaldehyde dehydrogen 97.0 0.0056 1.9E-07 48.9 10.3 106 17-132 182-301 (398)
319 3iht_A S-adenosyl-L-methionine 97.0 0.027 9.1E-07 39.0 12.0 112 11-133 29-149 (174)
320 2c0c_A Zinc binding alcohol de 97.0 0.0046 1.6E-07 48.8 9.7 98 17-132 160-262 (362)
321 1e3j_A NADP(H)-dependent ketos 97.0 0.0088 3E-07 46.9 11.2 106 16-131 164-271 (352)
322 4b7c_A Probable oxidoreductase 96.9 0.0023 7.9E-08 49.8 7.2 103 16-132 145-249 (336)
323 3ip1_A Alcohol dehydrogenase, 96.9 0.0068 2.3E-07 48.6 9.9 103 18-132 211-319 (404)
324 3gms_A Putative NADPH:quinone 96.9 0.0021 7.1E-08 50.3 6.7 102 17-132 141-244 (340)
325 1uuf_A YAHK, zinc-type alcohol 96.9 0.017 5.8E-07 45.7 12.0 97 17-131 191-288 (369)
326 3qwb_A Probable quinone oxidor 96.9 0.0019 6.4E-08 50.4 6.3 97 18-131 146-247 (334)
327 3m6i_A L-arabinitol 4-dehydrog 96.9 0.011 3.8E-07 46.5 10.8 105 16-131 175-283 (363)
328 3jyn_A Quinone oxidoreductase; 96.9 0.0021 7.2E-08 49.9 6.4 102 17-132 137-240 (325)
329 3uog_A Alcohol dehydrogenase; 96.9 0.0021 7.1E-08 50.8 6.4 100 17-133 186-289 (363)
330 1cdo_A Alcohol dehydrogenase; 96.8 0.0072 2.5E-07 47.8 9.4 99 17-132 189-295 (374)
331 2uyo_A Hypothetical protein ML 96.8 0.053 1.8E-06 41.9 13.9 111 20-133 102-220 (310)
332 4eye_A Probable oxidoreductase 96.8 0.0039 1.3E-07 48.8 7.6 98 17-131 156-257 (342)
333 1p0f_A NADP-dependent alcohol 96.8 0.0054 1.8E-07 48.5 8.5 99 17-131 188-293 (373)
334 1e3i_A Alcohol dehydrogenase, 96.8 0.0073 2.5E-07 47.8 9.1 99 17-132 192-298 (376)
335 1v3u_A Leukotriene B4 12- hydr 96.8 0.0038 1.3E-07 48.5 7.4 100 17-131 142-244 (333)
336 2vz8_A Fatty acid synthase; tr 96.8 0.00058 2E-08 66.2 3.0 102 21-132 1241-1349(2512)
337 1wly_A CAAR, 2-haloacrylate re 96.8 0.0034 1.2E-07 48.9 6.9 100 18-131 143-244 (333)
338 1g55_A DNA cytosine methyltran 96.7 0.0053 1.8E-07 48.3 7.7 76 21-106 2-77 (343)
339 2jhf_A Alcohol dehydrogenase E 96.7 0.0086 2.9E-07 47.4 9.0 99 17-132 188-294 (374)
340 1qor_A Quinone oxidoreductase; 96.7 0.0026 8.8E-08 49.4 5.7 97 18-131 138-239 (327)
341 3g7u_A Cytosine-specific methy 96.7 0.0081 2.8E-07 47.8 8.6 77 22-106 3-80 (376)
342 2fzw_A Alcohol dehydrogenase c 96.7 0.0081 2.8E-07 47.5 8.6 99 17-132 187-293 (373)
343 1rjd_A PPM1P, carboxy methyl t 96.7 0.047 1.6E-06 42.7 12.7 116 15-133 92-234 (334)
344 2hcy_A Alcohol dehydrogenase 1 96.7 0.014 5E-07 45.6 9.8 102 17-132 166-270 (347)
345 3uko_A Alcohol dehydrogenase c 96.6 0.0054 1.9E-07 48.6 7.3 104 17-133 190-297 (378)
346 2h6e_A ADH-4, D-arabinose 1-de 96.6 0.031 1.1E-06 43.6 11.5 100 17-131 168-269 (344)
347 1rjw_A ADH-HT, alcohol dehydro 96.6 0.015 5E-07 45.4 9.3 97 17-131 161-261 (339)
348 4dup_A Quinone oxidoreductase; 96.6 0.0055 1.9E-07 48.2 6.8 101 17-132 164-266 (353)
349 3two_A Mannitol dehydrogenase; 96.5 0.024 8.3E-07 44.3 10.0 93 17-132 173-266 (348)
350 2eih_A Alcohol dehydrogenase; 96.4 0.0041 1.4E-07 48.6 5.4 97 18-131 164-265 (343)
351 4dvj_A Putative zinc-dependent 96.4 0.011 3.6E-07 46.8 7.6 95 20-130 171-269 (363)
352 2d8a_A PH0655, probable L-thre 96.4 0.011 3.7E-07 46.3 7.6 96 20-131 167-267 (348)
353 2j3h_A NADP-dependent oxidored 96.4 0.0058 2E-07 47.7 6.0 101 17-131 152-255 (345)
354 1jvb_A NAD(H)-dependent alcoho 96.4 0.015 5.2E-07 45.4 8.3 100 17-131 167-271 (347)
355 1vj0_A Alcohol dehydrogenase, 96.4 0.014 4.8E-07 46.3 8.2 102 18-132 193-299 (380)
356 1yb5_A Quinone oxidoreductase; 96.3 0.01 3.5E-07 46.6 7.1 101 17-131 167-269 (351)
357 1iz0_A Quinone oxidoreductase; 96.3 0.028 9.4E-07 43.0 9.3 93 18-131 123-218 (302)
358 2zb4_A Prostaglandin reductase 96.2 0.014 4.8E-07 45.8 7.4 99 17-132 155-261 (357)
359 1boo_A Protein (N-4 cytosine-s 96.2 0.0093 3.2E-07 46.4 5.9 69 10-83 240-310 (323)
360 3gaz_A Alcohol dehydrogenase s 96.2 0.033 1.1E-06 43.5 9.2 98 17-131 147-246 (343)
361 2j8z_A Quinone oxidoreductase; 96.1 0.024 8.2E-07 44.5 8.3 100 18-131 160-261 (354)
362 2b5w_A Glucose dehydrogenase; 96.1 0.043 1.5E-06 43.0 9.7 100 16-132 162-274 (357)
363 2c7p_A Modification methylase 96.1 0.014 4.7E-07 45.6 6.6 68 21-104 11-78 (327)
364 1piw_A Hypothetical zinc-type 96.1 0.03 1E-06 44.0 8.7 99 17-131 176-276 (360)
365 1g60_A Adenine-specific methyl 96.1 0.0067 2.3E-07 45.7 4.7 52 74-130 5-73 (260)
366 3fbg_A Putative arginate lyase 96.1 0.034 1.2E-06 43.4 8.8 94 20-130 150-247 (346)
367 1boo_A Protein (N-4 cytosine-s 96.0 0.0091 3.1E-07 46.5 5.3 54 72-130 13-83 (323)
368 1eg2_A Modification methylase 95.9 0.017 5.8E-07 44.9 6.4 57 10-69 230-291 (319)
369 3fwz_A Inner membrane protein 95.9 0.051 1.7E-06 36.6 8.1 93 22-129 8-103 (140)
370 1eg2_A Modification methylase 95.8 0.017 5.7E-07 45.0 6.1 53 73-130 38-105 (319)
371 2qrv_A DNA (cytosine-5)-methyl 95.8 0.034 1.2E-06 42.7 7.5 75 20-104 15-90 (295)
372 2zig_A TTHA0409, putative modi 95.6 0.017 5.9E-07 44.3 5.3 54 72-130 20-96 (297)
373 3gqv_A Enoyl reductase; medium 95.6 0.12 4.1E-06 40.7 10.2 98 19-131 163-263 (371)
374 1yqd_A Sinapyl alcohol dehydro 95.5 0.14 4.9E-06 40.2 10.5 95 20-131 187-282 (366)
375 2dq4_A L-threonine 3-dehydroge 95.5 0.024 8.3E-07 44.2 5.8 94 20-131 164-262 (343)
376 3krt_A Crotonyl COA reductase; 95.4 0.033 1.1E-06 45.3 6.4 101 17-131 225-344 (456)
377 2cf5_A Atccad5, CAD, cinnamyl 95.2 0.1 3.5E-06 40.9 8.6 97 18-131 177-275 (357)
378 1gu7_A Enoyl-[acyl-carrier-pro 95.2 0.091 3.1E-06 41.2 8.3 107 18-132 164-276 (364)
379 1xa0_A Putative NADPH dependen 95.2 0.034 1.1E-06 43.0 5.7 92 23-132 152-247 (328)
380 3pi7_A NADH oxidoreductase; gr 95.1 0.11 3.9E-06 40.4 8.7 97 22-132 166-264 (349)
381 4h0n_A DNMT2; SAH binding, tra 95.0 0.041 1.4E-06 43.0 5.8 73 22-104 4-76 (333)
382 4a0s_A Octenoyl-COA reductase/ 95.0 0.12 4E-06 41.8 8.7 100 17-131 217-336 (447)
383 1lss_A TRK system potassium up 95.0 0.37 1.3E-05 31.6 10.0 93 22-128 5-100 (140)
384 4a27_A Synaptic vesicle membra 94.9 0.065 2.2E-06 41.8 6.6 98 17-131 139-238 (349)
385 3qv2_A 5-cytosine DNA methyltr 94.8 0.039 1.3E-06 43.0 5.2 73 21-105 10-84 (327)
386 1id1_A Putative potassium chan 94.5 0.43 1.5E-05 32.3 9.4 97 21-129 3-103 (153)
387 3llv_A Exopolyphosphatase-rela 94.5 0.25 8.6E-06 32.9 8.0 93 21-129 6-101 (141)
388 2vn8_A Reticulon-4-interacting 94.4 0.17 5.7E-06 39.9 8.0 98 18-131 181-280 (375)
389 3goh_A Alcohol dehydrogenase, 94.4 0.11 3.7E-06 39.9 6.7 89 17-130 139-228 (315)
390 4dcm_A Ribosomal RNA large sub 94.3 0.13 4.6E-06 40.7 7.3 96 20-131 38-136 (375)
391 3me5_A Cytosine-specific methy 94.3 0.16 5.4E-06 41.7 7.8 58 22-85 89-147 (482)
392 1pjc_A Protein (L-alanine dehy 94.3 0.28 9.5E-06 38.6 8.9 99 19-131 165-267 (361)
393 2vhw_A Alanine dehydrogenase; 94.1 0.23 8E-06 39.3 8.3 99 19-131 166-268 (377)
394 3c85_A Putative glutathione-re 94.1 0.28 9.5E-06 34.3 7.9 94 22-129 40-137 (183)
395 3nx4_A Putative oxidoreductase 94.1 0.064 2.2E-06 41.3 4.9 92 23-132 149-242 (324)
396 4f3n_A Uncharacterized ACR, CO 94.1 0.12 4E-06 41.8 6.4 47 21-67 138-188 (432)
397 3ubt_Y Modification methylase 94.0 0.11 3.9E-06 40.1 6.2 66 23-104 2-68 (331)
398 2cdc_A Glucose dehydrogenase g 93.9 0.17 5.8E-06 39.7 7.0 94 21-132 181-279 (366)
399 3pid_A UDP-glucose 6-dehydroge 93.8 0.8 2.7E-05 37.0 10.9 103 17-135 32-157 (432)
400 3l4b_C TRKA K+ channel protien 93.8 0.32 1.1E-05 35.1 8.0 93 23-129 2-97 (218)
401 2aef_A Calcium-gated potassium 93.7 1 3.5E-05 32.7 10.7 95 20-130 8-104 (234)
402 1h2b_A Alcohol dehydrogenase; 93.6 0.29 9.8E-06 38.3 7.9 101 16-131 182-285 (359)
403 3l9w_A Glutathione-regulated p 93.6 0.22 7.5E-06 40.1 7.2 94 21-129 4-100 (413)
404 2eez_A Alanine dehydrogenase; 93.6 0.52 1.8E-05 37.1 9.3 99 19-131 164-266 (369)
405 1jw9_B Molybdopterin biosynthe 93.4 0.81 2.8E-05 33.9 9.8 80 20-107 30-131 (249)
406 3tqh_A Quinone oxidoreductase; 93.4 0.58 2E-05 35.9 9.2 95 16-131 148-245 (321)
407 2g1u_A Hypothetical protein TM 93.3 0.53 1.8E-05 32.0 8.0 100 16-129 14-116 (155)
408 1zkd_A DUF185; NESG, RPR58, st 93.0 0.34 1.2E-05 38.6 7.3 44 23-66 83-132 (387)
409 4fgs_A Probable dehydrogenase 92.8 2.3 7.8E-05 32.1 11.4 104 17-131 25-159 (273)
410 4e21_A 6-phosphogluconate dehy 92.7 3 0.0001 32.7 12.5 92 20-129 21-113 (358)
411 3ic5_A Putative saccharopine d 92.4 1.2 4.1E-05 28.1 8.4 81 21-117 5-89 (118)
412 1lnq_A MTHK channels, potassiu 92.3 1.1 3.8E-05 34.5 9.5 93 21-129 115-209 (336)
413 4a7p_A UDP-glucose dehydrogena 92.3 1.7 5.9E-05 35.2 10.8 101 21-134 8-132 (446)
414 3iup_A Putative NADPH:quinone 92.3 0.29 9.8E-06 38.7 6.1 77 19-105 169-248 (379)
415 3ggo_A Prephenate dehydrogenas 92.2 0.44 1.5E-05 36.7 7.0 89 22-128 34-125 (314)
416 3p2y_A Alanine dehydrogenase/p 92.1 0.43 1.5E-05 38.0 6.8 103 20-138 183-309 (381)
417 1tt7_A YHFP; alcohol dehydroge 92.0 0.065 2.2E-06 41.4 2.1 94 23-132 153-248 (330)
418 2vz8_A Fatty acid synthase; tr 92.0 0.29 1E-05 48.0 6.9 104 17-130 1664-1769(2512)
419 4fn4_A Short chain dehydrogena 92.0 2.3 7.9E-05 31.7 10.5 82 19-105 5-92 (254)
420 1l7d_A Nicotinamide nucleotide 91.8 0.63 2.2E-05 36.9 7.7 42 20-63 171-213 (384)
421 3pxx_A Carveol dehydrogenase; 91.7 3.1 0.0001 30.9 11.2 110 19-131 8-153 (287)
422 3gt0_A Pyrroline-5-carboxylate 91.6 0.22 7.5E-06 36.8 4.5 87 22-128 3-94 (247)
423 3k96_A Glycerol-3-phosphate de 91.6 2 7E-05 33.6 10.2 96 21-129 29-131 (356)
424 4fs3_A Enoyl-[acyl-carrier-pro 91.5 3.2 0.00011 30.6 13.7 79 19-104 4-93 (256)
425 3abi_A Putative uncharacterize 91.3 0.63 2.2E-05 36.5 7.1 80 21-117 16-97 (365)
426 3k31_A Enoyl-(acyl-carrier-pro 91.1 3.9 0.00013 30.8 12.8 80 20-105 29-116 (296)
427 4eso_A Putative oxidoreductase 91.1 2.9 0.0001 30.7 10.3 107 19-131 6-138 (255)
428 1zsy_A Mitochondrial 2-enoyl t 91.1 0.97 3.3E-05 35.2 8.0 104 17-131 164-270 (357)
429 3tri_A Pyrroline-5-carboxylate 90.9 0.71 2.4E-05 34.9 6.9 87 22-128 4-95 (280)
430 3ijr_A Oxidoreductase, short c 90.9 3.8 0.00013 30.8 11.0 105 20-130 46-181 (291)
431 3oig_A Enoyl-[acyl-carrier-pro 90.8 3.7 0.00013 30.1 12.7 79 20-105 6-95 (266)
432 4g65_A TRK system potassium up 90.7 1.8 6.2E-05 35.2 9.4 71 21-105 3-76 (461)
433 1dlj_A UDP-glucose dehydrogena 90.5 3.6 0.00012 32.7 10.9 93 23-133 2-119 (402)
434 4ezb_A Uncharacterized conserv 90.4 4.9 0.00017 30.8 12.9 90 22-130 25-120 (317)
435 3grk_A Enoyl-(acyl-carrier-pro 90.3 4.6 0.00016 30.4 13.4 82 18-105 28-117 (293)
436 3h8v_A Ubiquitin-like modifier 90.2 2.6 8.9E-05 32.1 9.4 84 20-105 35-145 (292)
437 2y0c_A BCEC, UDP-glucose dehyd 90.1 1.7 5.9E-05 35.5 8.9 100 20-133 7-130 (478)
438 3gg2_A Sugar dehydrogenase, UD 90.0 3.5 0.00012 33.4 10.6 100 22-134 3-125 (450)
439 3vtf_A UDP-glucose 6-dehydroge 90.0 1.7 5.7E-05 35.3 8.5 39 22-62 22-61 (444)
440 3ioy_A Short-chain dehydrogena 89.9 2.3 7.9E-05 32.5 9.1 85 20-105 7-95 (319)
441 1wma_A Carbonyl reductase [NAD 89.9 4.5 0.00015 29.5 10.6 83 20-105 3-90 (276)
442 2g5c_A Prephenate dehydrogenas 89.8 0.91 3.1E-05 34.0 6.6 88 23-129 3-94 (281)
443 4dio_A NAD(P) transhydrogenase 89.7 1.1 3.8E-05 35.9 7.2 42 20-63 189-231 (405)
444 3t8y_A CHEB, chemotaxis respon 89.6 3.2 0.00011 27.9 8.9 95 29-130 9-105 (164)
445 1x13_A NAD(P) transhydrogenase 89.6 0.97 3.3E-05 36.1 6.9 42 19-62 170-212 (401)
446 3ce6_A Adenosylhomocysteinase; 89.4 1.6 5.3E-05 36.0 8.0 89 18-130 271-360 (494)
447 3slk_A Polyketide synthase ext 89.4 0.24 8.1E-06 43.3 3.3 98 17-130 342-441 (795)
448 1xg5_A ARPG836; short chain de 89.4 5.2 0.00018 29.6 12.3 86 19-105 30-119 (279)
449 3h7a_A Short chain dehydrogena 89.4 1.9 6.6E-05 31.7 8.0 83 19-105 5-91 (252)
450 3tjr_A Short chain dehydrogena 89.3 2.2 7.5E-05 32.3 8.4 84 19-105 29-116 (301)
451 1bg6_A N-(1-D-carboxylethyl)-L 89.1 3.3 0.00011 31.9 9.5 97 22-130 5-108 (359)
452 3t4x_A Oxidoreductase, short c 89.1 2.4 8.2E-05 31.4 8.4 82 20-105 9-93 (267)
453 3r3s_A Oxidoreductase; structu 89.1 5 0.00017 30.2 10.3 109 20-131 48-185 (294)
454 3trk_A Nonstructural polyprote 89.0 0.95 3.3E-05 34.1 5.8 40 95-134 209-262 (324)
455 4g65_A TRK system potassium up 88.8 3.5 0.00012 33.5 9.7 90 6-108 219-311 (461)
456 3swr_A DNA (cytosine-5)-methyl 88.6 2.3 7.9E-05 38.1 9.0 74 22-104 541-625 (1002)
457 3f9i_A 3-oxoacyl-[acyl-carrier 88.4 5.6 0.00019 28.8 10.5 78 19-105 12-92 (249)
458 3hwr_A 2-dehydropantoate 2-red 88.4 1.5 5.1E-05 33.7 7.0 95 20-129 18-118 (318)
459 3edm_A Short chain dehydrogena 88.2 6.1 0.00021 29.0 10.8 84 19-105 6-94 (259)
460 1x0v_A GPD-C, GPDH-C, glycerol 88.1 1.9 6.5E-05 33.3 7.5 94 22-129 9-122 (354)
461 3ek2_A Enoyl-(acyl-carrier-pro 88.0 6.3 0.00021 28.8 11.2 82 18-105 11-100 (271)
462 4g81_D Putative hexonate dehyd 88.0 3.7 0.00013 30.6 8.7 81 19-105 7-94 (255)
463 1zud_1 Adenylyltransferase THI 88.0 6.5 0.00022 29.0 10.1 80 19-106 26-127 (251)
464 3to5_A CHEY homolog; alpha(5)b 87.8 4 0.00014 27.1 8.0 68 44-118 11-80 (134)
465 3ucx_A Short chain dehydrogena 87.7 5.5 0.00019 29.3 9.6 81 19-105 9-96 (264)
466 4ina_A Saccharopine dehydrogen 87.7 6.2 0.00021 31.4 10.4 90 22-118 2-97 (405)
467 3sju_A Keto reductase; short-c 87.2 3.2 0.00011 31.0 8.1 82 18-105 21-109 (279)
468 2qyt_A 2-dehydropantoate 2-red 87.1 2.9 0.0001 31.6 7.9 34 96-129 82-115 (317)
469 3ojo_A CAP5O; rossmann fold, c 86.6 1.6 5.5E-05 35.2 6.4 106 21-136 11-134 (431)
470 4ft4_B DNA (cytosine-5)-methyl 86.5 1.5 5E-05 38.2 6.5 60 22-87 213-276 (784)
471 3eod_A Protein HNR; response r 86.4 4.5 0.00016 25.6 10.8 78 45-130 7-86 (130)
472 3rui_A Ubiquitin-like modifier 86.3 10 0.00035 29.6 10.6 57 20-78 33-110 (340)
473 3lyl_A 3-oxoacyl-(acyl-carrier 86.3 6.7 0.00023 28.3 9.3 83 20-105 4-90 (247)
474 3is3_A 17BETA-hydroxysteroid d 86.3 8.2 0.00028 28.4 10.8 112 19-133 16-154 (270)
475 3qiv_A Short-chain dehydrogena 86.1 5.5 0.00019 28.9 8.8 83 20-105 8-94 (253)
476 3d4o_A Dipicolinate synthase s 86.0 7.1 0.00024 29.4 9.5 89 19-129 153-242 (293)
477 3f6c_A Positive transcription 85.8 5 0.00017 25.5 8.3 76 47-130 3-81 (134)
478 3f1l_A Uncharacterized oxidore 85.7 5.9 0.0002 28.9 8.8 82 19-105 10-100 (252)
479 3eul_A Possible nitrate/nitrit 85.5 5.8 0.0002 26.0 8.9 79 45-130 15-96 (152)
480 3o38_A Short chain dehydrogena 85.5 5.1 0.00017 29.4 8.4 83 19-105 20-109 (266)
481 3r1i_A Short-chain type dehydr 85.5 5.9 0.0002 29.5 8.8 84 19-105 30-117 (276)
482 3hzh_A Chemotaxis response reg 85.4 6.1 0.00021 26.1 9.9 80 46-130 37-118 (157)
483 2wyu_A Enoyl-[acyl carrier pro 85.4 9 0.00031 28.0 10.0 83 20-105 7-94 (261)
484 1ja9_A 4HNR, 1,3,6,8-tetrahydr 85.3 8.6 0.00029 28.1 9.6 83 20-105 20-107 (274)
485 3cg0_A Response regulator rece 85.1 5.6 0.00019 25.4 9.2 78 45-130 9-89 (140)
486 2izz_A Pyrroline-5-carboxylate 85.1 3.1 0.00011 31.9 7.2 87 22-129 23-116 (322)
487 2hmt_A YUAA protein; RCK, KTN, 85.1 2.4 8.3E-05 27.6 5.9 93 21-129 6-102 (144)
488 3rkr_A Short chain oxidoreduct 85.1 5.5 0.00019 29.3 8.4 84 19-105 27-114 (262)
489 1g0o_A Trihydroxynaphthalene r 85.1 9.8 0.00034 28.2 10.2 80 20-105 28-115 (283)
490 3b1f_A Putative prephenate deh 85.0 9.4 0.00032 28.4 9.8 90 21-128 6-98 (290)
491 3o26_A Salutaridine reductase; 85.0 3.4 0.00012 30.9 7.3 86 19-106 10-100 (311)
492 2x9g_A PTR1, pteridine reducta 85.0 9.8 0.00033 28.3 9.9 83 20-105 22-114 (288)
493 2o3j_A UDP-glucose 6-dehydroge 84.9 7.7 0.00026 31.6 9.8 100 22-134 10-138 (481)
494 4imr_A 3-oxoacyl-(acyl-carrier 84.7 3 0.0001 31.1 6.8 84 19-105 31-117 (275)
495 2ew2_A 2-dehydropantoate 2-red 84.7 5.9 0.0002 29.7 8.6 94 22-129 4-106 (316)
496 4fb5_A Probable oxidoreductase 84.7 8.7 0.0003 29.8 9.8 72 19-107 23-104 (393)
497 4gsl_A Ubiquitin-like modifier 84.7 11 0.00037 31.9 10.6 58 19-78 324-402 (615)
498 3tfo_A Putative 3-oxoacyl-(acy 84.6 5.5 0.00019 29.5 8.2 83 20-105 3-89 (264)
499 3nyw_A Putative oxidoreductase 84.5 5.1 0.00017 29.3 7.9 83 19-105 5-95 (250)
500 3lua_A Response regulator rece 84.3 6.3 0.00021 25.3 9.2 79 45-131 4-89 (140)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.2e-33 Score=213.15 Aligned_cols=180 Identities=39% Similarity=0.644 Sum_probs=160.1
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...++.+++|..++...++++|||||||+|++++++|+.++++++|+++|+++++++.|+++++..++.++++++.+|+
T Consensus 42 ~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 42 MQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp TSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999988768999999999999999999999999988999999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
.+.++.+.+. ...++||+||+|+....+..+++.+.++|+|||+++++|++|.|.+.++..... ....+++|+
T Consensus 122 ~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~------~~~~~~~~~ 194 (242)
T 3r3h_A 122 LDTLHSLLNE-GGEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSG------QTREIKKLN 194 (242)
T ss_dssp HHHHHHHHHH-HCSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCH------HHHHHHHHH
T ss_pred HHHHHHHhhc-cCCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccCh------HHHHHHHHH
Confidence 8887765321 012789999999998889999999999999999999999999998877654321 456799999
Q ss_pred HHhhcCCCeEEEEeecCCceEEEEEcC
Q 029780 162 RSLADDPRVQLSHVALGDGITICRRIF 188 (188)
Q Consensus 162 ~~~~~~~~~~~~~lp~~~G~~~~~~~~ 188 (188)
+.+..+++|+++++|+++|+++++|++
T Consensus 195 ~~l~~~~~~~~~~lp~~dG~~~~~k~~ 221 (242)
T 3r3h_A 195 QVIKNDSRVFVSLLAIADGMFLVQPIA 221 (242)
T ss_dssp HHHHTCCSEEEEEESSSSCEEEEEEC-
T ss_pred HHHhhCCCEEEEEEEccCceEEEEEcC
Confidence 999999999999999999999999874
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.6e-33 Score=210.05 Aligned_cols=174 Identities=22% Similarity=0.342 Sum_probs=156.2
Q ss_pred CCcHHHHHHHHHHHHHcCCC---EEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC-CcEEEEE
Q 029780 3 GTAPDAGQLMAMLLRLVNAK---KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIE 78 (188)
Q Consensus 3 ~~~~~~~~~l~~l~~~~~~~---~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~ 78 (188)
...++++++|..++...+++ +|||||||+|++++++++.++++++|+++|+++++++.|+++++..++. +++++++
T Consensus 36 ~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~ 115 (221)
T 3dr5_A 36 APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL 115 (221)
T ss_dssp CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE
Confidence 35789999999999998888 9999999999999999999876899999999999999999999999988 7899999
Q ss_pred cchHHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHH
Q 029780 79 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 158 (188)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (188)
+|+.+.++.+. .++||+||+|+....+..+++.+.++|+|||+++++|++|.|.+.++.... + ....++
T Consensus 116 gda~~~l~~~~-----~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~----~--~~~~~~ 184 (221)
T 3dr5_A 116 SRPLDVMSRLA-----NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKD----R--DTQAAR 184 (221)
T ss_dssp SCHHHHGGGSC-----TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCC----H--HHHHHH
T ss_pred cCHHHHHHHhc-----CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCC----h--HHHHHH
Confidence 99988766541 378999999999888999999999999999999999999999887764321 1 455789
Q ss_pred HHHHHhhcCCCeEEEEeecCCceEEEEEc
Q 029780 159 DLNRSLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 159 ~~~~~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
+|++++.++|+++++++|+++|++++++-
T Consensus 185 ~~~~~l~~~~~~~~~~lp~gdGl~~~~~~ 213 (221)
T 3dr5_A 185 DADEYIRSIEGAHVARLPLGAGLTVVTKA 213 (221)
T ss_dssp HHHHHHTTCTTEEEEEESSTTCEEEEEEC
T ss_pred HHHHHHhhCCCeeEEEeeccchHHHHHHH
Confidence 99999999999999999999999999974
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=7.9e-33 Score=209.48 Aligned_cols=186 Identities=68% Similarity=1.161 Sum_probs=162.4
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...++.++++..++...++++|||||||+|+++.++++.++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 52 ~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 131 (237)
T 3c3y_A 52 MSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDA 131 (237)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999999999999999999999999999998767999999999999999999999999887899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
.+.++.+.+.+...++||+||+|++...+..+++.+.++|+|||+++++|++|.|.+..+........+. ....+++|+
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~-~~~~i~~~~ 210 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTLWGGTVAQPESEVPDFMKE-NREAVIELN 210 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTTGGGGGGSCGGGSCGGGHH-HHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCCcCCccCCCcccchhhHHH-HHHHHHHHH
Confidence 9887765432101368999999999889999999999999999999999999999887764322233344 567799999
Q ss_pred HHhhcCCCeEEEEeecCCceEEEEEcC
Q 029780 162 RSLADDPRVQLSHVALGDGITICRRIF 188 (188)
Q Consensus 162 ~~~~~~~~~~~~~lp~~~G~~~~~~~~ 188 (188)
+.+..++++.++.+|+++|+++++|+.
T Consensus 211 ~~l~~~~~~~~~~lp~~dG~~~~~~~~ 237 (237)
T 3c3y_A 211 KLLAADPRIEIVHLPLGDGITFCRRLY 237 (237)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEECC
T ss_pred HHHhcCCCeEEEEEEeCCceEEEEEcC
Confidence 999999999999999999999999873
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=2.1e-32 Score=208.39 Aligned_cols=186 Identities=60% Similarity=1.034 Sum_probs=161.4
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...+++++++..++...++++|||||||+|+++.++++.++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 56789999999999999999999999999999999999998767899999999999999999999999878899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCc-ccchHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHF-RGSSRQAILDL 160 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~ 160 (188)
.+.++.+...+...++||+||+|+....+..+++.+.++|+|||+++++|++|.|.+..+.....+.. ++ ....+++|
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~-~~~~i~~~ 219 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRY-YRDFVLEL 219 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTTGGGGGGCCTTSCCCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCCcCCcccCCCccchhhhhhH-HHHHHHHH
Confidence 98877653210013689999999988889999999999999999999999999999887754322211 33 56679999
Q ss_pred HHHhhcCCCeEEEEeecCCceEEEEEcC
Q 029780 161 NRSLADDPRVQLSHVALGDGITICRRIF 188 (188)
Q Consensus 161 ~~~~~~~~~~~~~~lp~~~G~~~~~~~~ 188 (188)
++.+..++++....+|+++|+++++|+.
T Consensus 220 ~~~l~~~~~~~~~~lp~~dG~~l~~k~~ 247 (247)
T 1sui_A 220 NKALAVDPRIEICMLPVGDGITICRRIK 247 (247)
T ss_dssp HHHHHTCTTBCCEEECSTTCEEEECBCC
T ss_pred HHHHhhCCCeEEEEEecCCccEEEEEcC
Confidence 9999999999999999999999999863
No 5
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=4.4e-31 Score=197.84 Aligned_cols=179 Identities=37% Similarity=0.590 Sum_probs=158.7
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
+...+..++++..++...++.+|||+|||+|.++.+++..++++++|+++|+++++++.++++++..++.++++++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 56789999999999999999999999999999999999988767899999999999999999999999888899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
.+.++.+... ...++||+||+++....+..+++.+.++|+|||+++++|+.+.|.+..+..... ....+++|+
T Consensus 126 ~~~~~~~~~~-~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~------~~~~~~~~~ 198 (225)
T 3tr6_A 126 KDTLAELIHA-GQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSE------NNQLIRLFN 198 (225)
T ss_dssp HHHHHHHHTT-TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCH------HHHHHHHHH
T ss_pred HHHHHHhhhc-cCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccCh------HHHHHHHHH
Confidence 8877665321 001689999999988888999999999999999999999999998877654321 466799999
Q ss_pred HHhhcCCCeEEEEeecCCceEEEEEc
Q 029780 162 RSLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 162 ~~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
+.+..+++++.+.+|+++|+.+++|+
T Consensus 199 ~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 199 QKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 99999999999999999999999987
No 6
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=6.8e-31 Score=198.24 Aligned_cols=177 Identities=42% Similarity=0.660 Sum_probs=158.1
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...+..++++..++...++++|||+|||+|+++.+++..++++++++++|+++++++.|+++++..++.++++++.+|+
T Consensus 54 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 133 (232)
T 3cbg_A 54 MQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPA 133 (232)
T ss_dssp GSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 56789999999999998899999999999999999999988767899999999999999999999988877899999999
Q ss_pred HHHHHHHhhcccCC--CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHH
Q 029780 82 LSVLDQLLKYSENE--GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 159 (188)
Q Consensus 82 ~~~~~~~~~~~~~~--~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (188)
.+.++.+... . ++||+||+|+....+..+++.+.++|+|||+++++|+.|.|.+..+.... . ....+++
T Consensus 134 ~~~l~~l~~~---~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~-----~-~~~~~~~ 204 (232)
T 3cbg_A 134 LATLEQLTQG---KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQE-----A-QTQVLQQ 204 (232)
T ss_dssp HHHHHHHHTS---SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCS-----H-HHHHHHH
T ss_pred HHHHHHHHhc---CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCC-----h-HHHHHHH
Confidence 8877765421 2 68999999998888899999999999999999999999999887664321 1 6677999
Q ss_pred HHHHhhcCCCeEEEEeecCCceEEEEEc
Q 029780 160 LNRSLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 160 ~~~~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
|++.+..++++.++++|+++|+++++|+
T Consensus 205 ~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 205 FNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 9999999999999999999999999985
No 7
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=1.3e-30 Score=195.13 Aligned_cols=179 Identities=25% Similarity=0.428 Sum_probs=159.0
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|.+.+..++++..++...++.+|||||||+|+++.++++.++++++++++|+++++++.|++++...++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (223)
T 3duw_A 40 HDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLA 119 (223)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 55789999999999999999999999999999999999998767899999999999999999999999988899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
.+.++.+.+. ..++||+||+|.....+..+++.+.++|+|||+++++|+.+.|.+..+..... ....+++|+
T Consensus 120 ~~~~~~~~~~--~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~------~~~~~~~~~ 191 (223)
T 3duw_A 120 LDSLQQIENE--KYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDP------RVQGIRRFY 191 (223)
T ss_dssp HHHHHHHHHT--TCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCH------HHHHHHHHH
T ss_pred HHHHHHHHhc--CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccch------HHHHHHHHH
Confidence 8877765432 12579999999988888999999999999999999999999998777654321 556799999
Q ss_pred HHhhcCCCeEEEEeec-----CCceEEEEEcC
Q 029780 162 RSLADDPRVQLSHVAL-----GDGITICRRIF 188 (188)
Q Consensus 162 ~~~~~~~~~~~~~lp~-----~~G~~~~~~~~ 188 (188)
+.+..++++..+++|+ ++|+.++++++
T Consensus 192 ~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~~ 223 (223)
T 3duw_A 192 ELIAAEPRVSATALQTVGSKGYDGFIMAVVKE 223 (223)
T ss_dssp HHHHHCTTEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred HHHhhCCCeEEEEEeccCCCCCCeeEEEEEeC
Confidence 9999999999999999 99999999875
No 8
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.98 E-value=6.4e-31 Score=198.35 Aligned_cols=176 Identities=24% Similarity=0.334 Sum_probs=155.4
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
..++.++++..++...++.+|||+|||+|+++.+++...+ +.+|+++|+++++++.|+++++..++.++++++.+|+.+
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 4688999999999999999999999999999999999766 789999999999999999999999988889999999988
Q ss_pred HHH-HHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHHH
Q 029780 84 VLD-QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 162 (188)
Q Consensus 84 ~~~-~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (188)
.++ .+ .++||+||++.....+..+++.+.++|+|||+++++|++|.|.+..+.....+..+. ....+++|++
T Consensus 134 ~~~~~~------~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~-~~~~~~~~~~ 206 (232)
T 3ntv_A 134 QFENVN------DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQ-MVKKVQDYNE 206 (232)
T ss_dssp CHHHHT------TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHH-HHHHHHHHHH
T ss_pred HHHhhc------cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhH-HHHHHHHHHH
Confidence 766 44 478999999998888999999999999999999999999999887764311111222 4567999999
Q ss_pred HhhcCCCeEEEEeecCCceEEEEEc
Q 029780 163 SLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 163 ~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
.+..+++++.+.+|+++|+.+++|+
T Consensus 207 ~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 207 WLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp HHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHhcCCCeEEEEEEcCCceEEEEEC
Confidence 9999999999999999999999986
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.98 E-value=2.6e-30 Score=196.90 Aligned_cols=177 Identities=29% Similarity=0.499 Sum_probs=157.6
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...+..++++..++...++.+|||||||+|+++..++..++++++|+++|+++++++.|+++++..++.++++++.+|+
T Consensus 45 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 124 (248)
T 3tfw_A 45 HDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPA 124 (248)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 45679999999999999999999999999999999999998767899999999999999999999999988899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
.+.++.+. ..++||+||+|+....+..+++.+.++|+|||+++++|+++.|.+..+..... ....+++|+
T Consensus 125 ~~~l~~~~----~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~------~~~~~~~~~ 194 (248)
T 3tfw_A 125 LQSLESLG----ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADE------RVQGVRQFI 194 (248)
T ss_dssp HHHHHTCC----SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCH------HHHHHHHHH
T ss_pred HHHHHhcC----CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccch------HHHHHHHHH
Confidence 88776541 13589999999988888999999999999999999999999998887654321 667799999
Q ss_pred HHhhcCCCeEEEEe-ecC----CceEEEEEcC
Q 029780 162 RSLADDPRVQLSHV-ALG----DGITICRRIF 188 (188)
Q Consensus 162 ~~~~~~~~~~~~~l-p~~----~G~~~~~~~~ 188 (188)
+.+..+++|+.+.+ |++ +|+.++++++
T Consensus 195 ~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~~ 226 (248)
T 3tfw_A 195 EMMGAEPRLTATALQTVGTKGWDGFTLAWVNA 226 (248)
T ss_dssp HHHHHCTTEEEEEEEECSTTCSEEEEEEEECC
T ss_pred HHHhhCCCEEEEEeecCCCCCCCeeEEEEEeC
Confidence 99999999999988 676 9999999874
No 10
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.97 E-value=6.3e-30 Score=192.02 Aligned_cols=179 Identities=39% Similarity=0.644 Sum_probs=157.4
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
+...++.++++..++...++++|||+|||+|.++..+++.++++++++++|+++++++.|+++++..++.++++++++|+
T Consensus 51 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~ 130 (229)
T 2avd_A 51 SMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA 130 (229)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred CccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCH
Confidence 56778999999999999999999999999999999999988757899999999999999999999998878899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
.+.++.+.+.+ ..++||+||+|.....+..+++.+.++|+|||+++++|+++.|.+..+.... . ....+++|+
T Consensus 131 ~~~~~~~~~~~-~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~-----~-~~~~~~~~~ 203 (229)
T 2avd_A 131 LETLDELLAAG-EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGD-----V-AAECVRNLN 203 (229)
T ss_dssp HHHHHHHHHTT-CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTC-----H-HHHHHHHHH
T ss_pred HHHHHHHHhcC-CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCC-----h-HHHHHHHHH
Confidence 88776653210 0168999999988888889999999999999999999999999887654321 1 667799999
Q ss_pred HHhhcCCCeEEEEeecCCceEEEEEc
Q 029780 162 RSLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 162 ~~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
+.+..++++.++.+|+++|+++++|+
T Consensus 204 ~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 204 ERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp HHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHhhCCCEEEEEEecCCceEEEEEC
Confidence 99999999999999999999999985
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.96 E-value=4.6e-28 Score=183.32 Aligned_cols=180 Identities=38% Similarity=0.587 Sum_probs=156.2
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...+..++++..++...++.+|||||||+|+.+..+++.++++++++++|+++++++.|++++...++.++++++.+|+
T Consensus 42 ~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 42 MQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 56789999999999999999999999999999999999988757899999999999999999999988877899999999
Q ss_pred HHHHHHHhh--------cccCC--CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCccc
Q 029780 82 LSVLDQLLK--------YSENE--GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRG 151 (188)
Q Consensus 82 ~~~~~~~~~--------~~~~~--~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~ 151 (188)
.+.++.+.. ++... ++||+||++.....+..+++.+.++|+|||+++++++.|.|.+..+.... .
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~-----~ 196 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQE-----P 196 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCC-----H
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccc-----h
Confidence 887665421 00111 68999999988888889999999999999999999999999877654321 1
Q ss_pred chHHHHHHHHHHhhcCCCeEEEEeecCCceEEEEEc
Q 029780 152 SSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
....++.|++.+..++++.+..+|+++|+.+++|+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 197 -STVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp -HHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred -HHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 66779999999999999999999999999999986
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.96 E-value=1.5e-28 Score=182.46 Aligned_cols=171 Identities=20% Similarity=0.286 Sum_probs=144.9
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchH
Q 029780 3 GTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 82 (188)
Q Consensus 3 ~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 82 (188)
...+..++++..++...++.+|||+|||+|+++.++++.++++++|+++|+++++++.|+++++..++.++++++.+|+.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 35788899999998888999999999999999999999886578999999999999999999998888778999999998
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHHH
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 162 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (188)
+.++.+ .+ ||+||++.....+..+++.+.++|+|||+++++|+.|.|.+.++ . ... ....+++|.+
T Consensus 119 ~~~~~~------~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~-~-~~~-----~~~~~~~~~~ 184 (210)
T 3c3p_A 119 GIAAGQ------RD-IDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRGSVAES-H-EDP-----ETAALREFNH 184 (210)
T ss_dssp HHHTTC------CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEESSSSCC-------------------CCCHHHH
T ss_pred HHhccC------CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEECccccCcccCc-c-cch-----HHHHHHHHHH
Confidence 766543 35 99999998888889999999999999999999999998876643 1 111 3334889999
Q ss_pred HhhcCCCeEEEEeecCCceEEEEEc
Q 029780 163 SLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 163 ~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
.+..++++....+|+++|+.+++|+
T Consensus 185 ~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 185 HLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp HHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred HHhhCCCeEEEEEecCCceEEEEeC
Confidence 9999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=1.9e-27 Score=177.88 Aligned_cols=164 Identities=22% Similarity=0.375 Sum_probs=140.7
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
|...++.++++..++...++.+|||+|||+|.++.++++.++++++|+++|+++++++.|+++++..++.++++++++|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 56789999999999999999999999999999999999987668899999999999999999999999888899999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHH---HHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHH
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCN---YHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAIL 158 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~---~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 158 (188)
.+.++.+... ...++||+||+|+....+.. +++.+ ++|+|||+++++|+.+++ .+
T Consensus 120 ~~~l~~~~~~-~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~--------------------~~ 177 (221)
T 3u81_A 120 QDLIPQLKKK-YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPG--------------------TP 177 (221)
T ss_dssp HHHGGGTTTT-SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCC--------------------CH
T ss_pred HHHHHHHHHh-cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcc--------------------hH
Confidence 8876654210 01168999999987766654 44555 999999999999988744 46
Q ss_pred HHHHHhhcCCCeEEEEee-------cCCceEEEEEc
Q 029780 159 DLNRSLADDPRVQLSHVA-------LGDGITICRRI 187 (188)
Q Consensus 159 ~~~~~~~~~~~~~~~~lp-------~~~G~~~~~~~ 187 (188)
.|.+++.++++|.+..+| +++|+.+++++
T Consensus 178 ~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 178 DFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp HHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred HHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 788889999999999998 79999999875
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.95 E-value=1.1e-26 Score=174.88 Aligned_cols=179 Identities=25% Similarity=0.387 Sum_probs=138.3
Q ss_pred CCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchH
Q 029780 3 GTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 82 (188)
Q Consensus 3 ~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 82 (188)
...+..++++..++...++.+|||+|||+|..+..+++.++ +.+++++|+++++++.|++++...++.++++++.+|+.
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 115 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDAL 115 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGG
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH
Confidence 35688899999999988999999999999999999999987 78999999999999999999999998778999999998
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHHH
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNR 162 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (188)
+.++... ..++||+|+++.....+..+++.+.++|+|||.++++|+++.|.+..++. ..+..+. ....+++|+.
T Consensus 116 ~~~~~~~----~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~ 189 (233)
T 2gpy_A 116 QLGEKLE----LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDNVLFRGLVAETDI-EHKRHKQ-LATKIDTYNQ 189 (233)
T ss_dssp GSHHHHT----TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEETTTC---------------------------C
T ss_pred HHHHhcc----cCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEcCCcCCccCCccc-cccchhH-HHHHHHHHHH
Confidence 7655431 13689999999877788899999999999999999999999886654321 1111111 3455788888
Q ss_pred HhhcCCCeEEEEeecCCceEEEEEcC
Q 029780 163 SLADDPRVQLSHVALGDGITICRRIF 188 (188)
Q Consensus 163 ~~~~~~~~~~~~lp~~~G~~~~~~~~ 188 (188)
.+..++.+.+.++|+++|+.+++|++
T Consensus 190 ~l~~~~~~~~~~~p~~dG~~~~~~~~ 215 (233)
T 2gpy_A 190 WLLEHPQYDTRIFPVGDGIAISIKRE 215 (233)
T ss_dssp TTTTCTTEEEEEECSTTCEEEEEEC-
T ss_pred HHHhCCCeEEEEEEcCCeEEEEEEcC
Confidence 99999999999999999999999763
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.84 E-value=4.4e-20 Score=135.35 Aligned_cols=149 Identities=13% Similarity=0.087 Sum_probs=113.3
Q ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC--CCcEEEEEc
Q 029780 2 MGTAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--DHKINFIES 79 (188)
Q Consensus 2 ~~~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--~~~~~~~~~ 79 (188)
+..+++++++|.. ...++++|||||| |+||+++|+. + +++|+++|.+++..+.|++++++.|+ .++++++.+
T Consensus 14 ~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~g 87 (202)
T 3cvo_A 14 LTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWT 87 (202)
T ss_dssp CCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEEC
T ss_pred ccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEe
Confidence 4567899999988 5567899999998 6899999984 4 78999999999999999999999998 789999999
Q ss_pred chHHH--------------HHHHh----hcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccccCccccCC
Q 029780 80 EALSV--------------LDQLL----KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVP 141 (188)
Q Consensus 80 d~~~~--------------~~~~~----~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~ 141 (188)
|+.+. ++.+. +. ...++||+||+|+.+. ...+..+.++|++||+|+++|+.++....
T Consensus 88 da~~~~~wg~p~~~~~~~~l~~~~~~i~~~-~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~DNv~~r~~y~-- 162 (202)
T 3cvo_A 88 DIGPTGDWGHPVSDAKWRSYPDYPLAVWRT-EGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLFDDYSQRRWQH-- 162 (202)
T ss_dssp CCSSBCGGGCBSSSTTGGGTTHHHHGGGGC-TTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEETTGGGCSSGG--
T ss_pred CchhhhcccccccchhhhhHHHHhhhhhcc-ccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEEeCCcCCcchH--
Confidence 96432 22211 11 0136899999999765 36677788999999999999977543211
Q ss_pred CCCCCCCcccchHHHHHHHHHHhhcCCCeEEEEe
Q 029780 142 EEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHV 175 (188)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 175 (188)
.+.+|.+.+...++.-...+
T Consensus 163 --------------~v~~~~~~~~~~~~~a~f~~ 182 (202)
T 3cvo_A 163 --------------QVEEFLGAPLMIGRLAAFQV 182 (202)
T ss_dssp --------------GGHHHHCCCEEETTEEEEEE
T ss_pred --------------HHHHHHhHHhhcCceEEEEe
Confidence 15667666666666544433
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.82 E-value=1.5e-19 Score=139.13 Aligned_cols=158 Identities=12% Similarity=0.094 Sum_probs=125.0
Q ss_pred cHHHHHHHHHHHHH----cCCCEEEEEcccchHHHHHHHhhCC----CCCEEEEEeCCc---------------------
Q 029780 5 APDAGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNR--------------------- 55 (188)
Q Consensus 5 ~~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~~~~la~~~~----~~~~v~~iD~~~--------------------- 55 (188)
.++....|+.++.. ..+..|||+|++.|+++++++..++ ++.+|+++|..+
T Consensus 87 ~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~ 166 (282)
T 2wk1_A 87 GIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRR 166 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGG
T ss_pred CHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccc
Confidence 35566667666654 5588999999999999999988763 268999999642
Q ss_pred -----hhHHHHHHHHHhcCCC-CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-cchHHHHHHHHhccCcCeEEE
Q 029780 56 -----ETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAV 128 (188)
Q Consensus 56 -----~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-~~~~~~~~~~~~~L~~gG~lv 128 (188)
..++.+++++++.|+. ++++++.|++.+.++++. .++||+||+|++. ..+..+++.+.++|+|||+|+
T Consensus 167 ~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~-----~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 167 NSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP-----IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp HHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC-----CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEE
T ss_pred cccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC-----CCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEE
Confidence 1467789999999984 899999999999887642 4689999999986 456788999999999999999
Q ss_pred Eecccc-CccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEEeecCCceEEEEEc
Q 029780 129 YDNTLW-GGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITICRRI 187 (188)
Q Consensus 129 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~G~~~~~~~ 187 (188)
+||+.+ +| ...++++|.+. .++...+++++.+..+.+|.
T Consensus 242 ~DD~~~~~G----------------~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 242 VDDYMMCPP----------------CKDAVDEYRAK----FDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp ESSCTTCHH----------------HHHHHHHHHHH----TTCCSCCEECSSSCEEEECC
T ss_pred EcCCCCCHH----------------HHHHHHHHHHh----cCCceEEEEecCEEEEEEeC
Confidence 999854 22 55667777555 46777788999888887763
No 17
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.76 E-value=2.3e-18 Score=129.94 Aligned_cols=116 Identities=21% Similarity=0.309 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhh---CCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALT---IPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 82 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~---~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 82 (188)
+++..++..++...++.+|||||||+|+++..+++. +.++++|+++|+++++++.|+ ++.++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 788888888888888899999999999999999987 334789999999999998887 12357999999987
Q ss_pred HH--HHHHhhcccCCCceeEEEEeCCccchHHHHHHHHh-ccCcCeEEEEecc
Q 029780 83 SV--LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMK-LLKVGGIAVYDNT 132 (188)
Q Consensus 83 ~~--~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~-~L~~gG~lv~~~~ 132 (188)
+. ++.+ ...+||+|++++.+..+..++.++.+ +|+|||++++.+.
T Consensus 141 ~~~~l~~~-----~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHL-----REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGG-----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhh-----ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 63 2322 12479999999877788889999996 9999999999875
No 18
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.76 E-value=7.3e-18 Score=124.08 Aligned_cols=121 Identities=19% Similarity=0.193 Sum_probs=100.3
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
+..+....+...+...++.+|||+|||+|..+..+++..+ ..+++++|+++++++.++++++..++ ++++++.+|+.+
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~ 101 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPE 101 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhh
Confidence 3445544444445666778999999999999999999875 78999999999999999999998887 579999999865
Q ss_pred HHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 84 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++. .++||+|+++........+++.+.++|+|||.+++....
T Consensus 102 ~~~~-------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 102 GLDD-------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TCTT-------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhc-------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4332 368999999976667889999999999999999997544
No 19
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.76 E-value=6.4e-18 Score=132.40 Aligned_cols=150 Identities=18% Similarity=0.235 Sum_probs=109.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
..++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++... ++ .++++++.+|+.+.++..
T Consensus 106 ~~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~------ 178 (314)
T 2b2c_A 106 HPDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH------ 178 (314)
T ss_dssp SSSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc------
Confidence 35678999999999999999998754 789999999999999999998654 33 468999999998876542
Q ss_pred CCceeEEEEeCCcc-----c-h-HHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029780 95 EGSFDYAFVDADKD-----N-Y-CNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD 167 (188)
Q Consensus 95 ~~~~D~i~id~~~~-----~-~-~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (188)
.++||+|++|.... . + .++++.+.++|+|||+++++..... . . .. ....+.++++.+..+
T Consensus 179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~----~-~-------~~-~~~~~~~~l~~vF~~ 245 (314)
T 2b2c_A 179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW----L-H-------LP-LIAHLVAFNRKIFPA 245 (314)
T ss_dssp TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTT----T-C-------HH-HHHHHHHHHHHHCSE
T ss_pred CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc----c-C-------HH-HHHHHHHHHHHHCCc
Confidence 47899999986321 1 1 6789999999999999999752210 0 0 00 334456666666555
Q ss_pred CCeEEEEeec---CC-ceEEEEEc
Q 029780 168 PRVQLSHVAL---GD-GITICRRI 187 (188)
Q Consensus 168 ~~~~~~~lp~---~~-G~~~~~~~ 187 (188)
..+....+|. |+ |+.++.++
T Consensus 246 v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 246 VTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp EEEEEEECTTSGGGEEEEEEEESS
T ss_pred ceEEEEEecCcCCCceEEEEEeCC
Confidence 5666777776 34 78888754
No 20
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.76 E-value=8e-17 Score=117.18 Aligned_cols=116 Identities=10% Similarity=0.099 Sum_probs=93.2
Q ss_pred HHHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 10 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 10 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.++..+... .++.+|||+|||+|..+..++.. + ..+|+++|+++++++.|+++++..++ ++++++++|+.+....
T Consensus 32 ~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~ 108 (189)
T 3p9n_A 32 SLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAA 108 (189)
T ss_dssp HHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHH
T ss_pred HHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhh
Confidence 344444333 57789999999999999987774 2 56899999999999999999999887 5799999999887654
Q ss_pred HhhcccCCCceeEEEEeCCc----cchHHHHHHHHh--ccCcCeEEEEeccc
Q 029780 88 LLKYSENEGSFDYAFVDADK----DNYCNYHERLMK--LLKVGGIAVYDNTL 133 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~----~~~~~~~~~~~~--~L~~gG~lv~~~~~ 133 (188)
+ ..++||+|+++... ......++.+.+ +|+|||.+++....
T Consensus 109 ~-----~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 109 G-----TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp C-----CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred c-----cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 3 14789999998643 346678888888 99999999997544
No 21
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.76 E-value=1.1e-17 Score=129.17 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=91.3
Q ss_pred HHHHcCCCEEEEEcccchHHH-HHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029780 15 LLRLVNAKKTIEIGVFTGYSL-LLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~-~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
++...++.+|||||||+|..+ +.+|+ .+ +++|+++|+++++++.|++++++.++ ++++++++|+.+. +
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~-~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~------- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSH-VY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D------- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHH-TT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G-------
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHH-cc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C-------
Confidence 566788999999999998655 44554 44 78999999999999999999999998 7899999999763 2
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
.++||+||+++...+...+++++.+.|||||.+++.+.
T Consensus 186 -d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 -GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp -GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred -CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 37899999988777888999999999999999999764
No 22
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.75 E-value=2.4e-17 Score=121.71 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=96.3
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.++....+...+...++.+|||+|||+|..+..+++. +.+|+++|+++++++.|+++++..++.++++++.+|+.+.
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 4455555555556677789999999999999999986 6799999999999999999999999876899999999774
Q ss_pred HHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
++. .++||+|+++... ... +++.+.+.|+|||.+++....
T Consensus 117 ~~~-------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 117 LAD-------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp GTT-------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred ccc-------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 332 3689999998743 444 899999999999999997544
No 23
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.75 E-value=1.9e-17 Score=126.68 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=93.3
Q ss_pred HHHHHHHH--HcCCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 10 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 10 ~~l~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
+++..++. ..++.+|||+|||+|..+..+++.++ ++.+|+++|+++++++.|+++++..+...+++++++|+.+.
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-- 135 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-- 135 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC--
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc--
Confidence 33444443 45677999999999999999998764 36799999999999999999999888888899999998653
Q ss_pred HHhhcccCCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 87 QLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..++||+|++.... .....+++++.+.|||||.+++.+...
T Consensus 136 -------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 136 -------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp -------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 14679999886422 234568999999999999999976553
No 24
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.75 E-value=1.1e-17 Score=130.53 Aligned_cols=147 Identities=14% Similarity=0.205 Sum_probs=112.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh--cCC-CCcEEEEEcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
.++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++.. .++ .++++++.+|+.+.++.. .
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~------~ 166 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN------Q 166 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC------S
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC------C
Confidence 4678999999999999999998754 68999999999999999999765 233 468999999998876542 4
Q ss_pred CceeEEEEeCCcc-------chHHHHHHHHhccCcCeEEEEeccc-cCccccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029780 96 GSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADD 167 (188)
Q Consensus 96 ~~~D~i~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (188)
++||+|++|.... ...++++.+.++|+|||+++++... |.. .. ....+.++++.+..+
T Consensus 167 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-------------~~-~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 167 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH-------------LD-LIKEMRQFCQSLFPV 232 (304)
T ss_dssp SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC-------------HH-HHHHHHHHHHHHCSE
T ss_pred CCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc-------------hH-HHHHHHHHHHHhCCC
Confidence 7899999996432 1346899999999999999997633 211 00 445577777777666
Q ss_pred CCeEEEEeecC----CceEEEEE
Q 029780 168 PRVQLSHVALG----DGITICRR 186 (188)
Q Consensus 168 ~~~~~~~lp~~----~G~~~~~~ 186 (188)
.++....+|.- .|+.++.+
T Consensus 233 v~~~~~~vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 233 VAYAYCTIPTYPSGQIGFMLCSK 255 (304)
T ss_dssp EEEEEEECTTSGGGEEEEEEEES
T ss_pred ceeEEEEeccccCcceEEEEEeC
Confidence 67777777762 47888775
No 25
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.74 E-value=1.6e-17 Score=119.27 Aligned_cols=117 Identities=19% Similarity=0.167 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
..+.+...+...++.+|||+|||+|..+..++...+ +.+++++|+++++++.+++++...++..++ ++.+|..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc
Confidence 333343344555677999999999999999999876 789999999999999999999998887678 888888654332
Q ss_pred HhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 88 LLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
. .++||+|++...... ..+++.+.+.|+|||.+++....
T Consensus 91 ~------~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 91 V------PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp C------CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred c------CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 1 278999999865444 67899999999999999987644
No 26
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.74 E-value=3e-17 Score=118.06 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=89.8
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..+++. + ..+++++|+++++++.+++++...++.++++++.+|+.+.++.. .++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~ 100 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL------TGR 100 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB------CSC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh------cCC
Confidence 446789999999999999999886 3 57999999999999999999999888778999999998865543 467
Q ss_pred eeEEEEeCCc--cchHHHHHHHH--hccCcCeEEEEeccc
Q 029780 98 FDYAFVDADK--DNYCNYHERLM--KLLKVGGIAVYDNTL 133 (188)
Q Consensus 98 ~D~i~id~~~--~~~~~~~~~~~--~~L~~gG~lv~~~~~ 133 (188)
||+|+++... ......++.+. ++|+|||.+++....
T Consensus 101 fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 101 FDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 9999998653 34556677776 899999999987544
No 27
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.73 E-value=9.6e-17 Score=119.08 Aligned_cols=167 Identities=16% Similarity=0.163 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC----cEEEEEcch
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH----KINFIESEA 81 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d~ 81 (188)
++..+.+...+...++.+|||+|||+|..+..+++..+ ..+++++|+++++++.+++++...++.. +++++++|+
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 45556666666777888999999999999999998755 5799999999999999999998777654 799999997
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccccCccccC--CCC--CCCCCcccc
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV--PEE--QVPDHFRGS 152 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~--~~~--~~~~~~~~~ 152 (188)
... +. ..++||+|++.... .....+++.+.++|+|||++++......+.... +.. ....+....
T Consensus 94 ~~~-~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (217)
T 3jwh_A 94 TYQ-DK------RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEW 166 (217)
T ss_dssp TSC-CG------GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCB
T ss_pred ccc-cc------cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccccccccccccccccc
Confidence 432 11 13689999987532 234678999999999999888754332111110 000 001111110
Q ss_pred hHHHHHHHHHHhhcCCCeEEEEeecCCc
Q 029780 153 SRQAILDLNRSLADDPRVQLSHVALGDG 180 (188)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~lp~~~G 180 (188)
....++++.+.+....+|.....++++.
T Consensus 167 ~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 167 TRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp CHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 2344566666666677899888876653
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.73 E-value=1.1e-16 Score=118.89 Aligned_cols=168 Identities=20% Similarity=0.149 Sum_probs=113.0
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC----cEEEEEcc
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH----KINFIESE 80 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~----~~~~~~~d 80 (188)
.+...+.+..++...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...++.+ +++++++|
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSS 92 (219)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECC
T ss_pred hHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCc
Confidence 344555666666667889999999999999999998765 5799999999999999999988777654 79999999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCc---c--chHHHHHHHHhccCcCeEEEEeccccCccccC--CCCC--CCCCccc
Q 029780 81 ALSVLDQLLKYSENEGSFDYAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV--PEEQ--VPDHFRG 151 (188)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~D~i~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~--~~~~--~~~~~~~ 151 (188)
.... +. ..++||+|++.... . ....+++.+.++|+|||++++......+.... +... ...+...
T Consensus 93 ~~~~-~~------~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3jwg_A 93 LVYR-DK------RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFE 165 (219)
T ss_dssp SSSC-CG------GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTS
T ss_pred cccc-cc------ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceee
Confidence 7432 11 13689999987432 2 23578999999999999877754332211110 0000 0011110
Q ss_pred chHHHHHHHHHHhhcCCCeEEEEeecCCc
Q 029780 152 SSRQAILDLNRSLADDPRVQLSHVALGDG 180 (188)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~G 180 (188)
.....++.+.+.+....+|+....+++++
T Consensus 166 ~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 166 WTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp BCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred ecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 02334555555555566888888866643
No 29
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.72 E-value=1.4e-16 Score=115.27 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=89.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++.. + ..+++++|+++++++.|++++...++.++++++++|+.+..+.+.. ..++|
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~f 117 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---EKLQF 117 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH---TTCCE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh---cCCCC
Confidence 46779999999999999988874 2 5799999999999999999999988777899999999886654321 14789
Q ss_pred eEEEEeCC--ccchHHHHHHH--HhccCcCeEEEEeccc
Q 029780 99 DYAFVDAD--KDNYCNYHERL--MKLLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~~ 133 (188)
|+|+++.. .......++.+ .++|+|||.+++....
T Consensus 118 D~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 118 DLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 99999865 23456667777 7899999999986544
No 30
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.72 E-value=1.5e-16 Score=124.69 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=106.4
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--C-C-CCcEEEEEcchHHHHHHHhhccc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--G-V-DHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~-~-~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
..++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++... + + .++++++.+|+.+.++..
T Consensus 75 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~----- 148 (314)
T 1uir_A 75 HPEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT----- 148 (314)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-----
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-----
Confidence 45778999999999999999998654 679999999999999999987652 2 2 367999999998876542
Q ss_pred CCCceeEEEEeCCccc----------hHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHHHHHH
Q 029780 94 NEGSFDYAFVDADKDN----------YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILDLNRS 163 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~----------~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (188)
.++||+|++|..... ..++++.+.++|+|||++++...... ..... ....+.+.++.
T Consensus 149 -~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~----~~~~~--------~~~~~~~~l~~ 215 (314)
T 1uir_A 149 -EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMIL----LTHHR--------VHPVVHRTVRE 215 (314)
T ss_dssp -CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEEC----C---C--------HHHHHHHHHHT
T ss_pred -CCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcc----ccCHH--------HHHHHHHHHHH
Confidence 478999999964332 47889999999999999998632210 00000 23334444444
Q ss_pred hhcCCCeEEEEeecCCc---eEEEEE
Q 029780 164 LADDPRVQLSHVALGDG---ITICRR 186 (188)
Q Consensus 164 ~~~~~~~~~~~lp~~~G---~~~~~~ 186 (188)
+..+..+....+|..+| +.++.|
T Consensus 216 ~F~~v~~~~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 216 AFRYVRSYKNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp TCSEEEEEEEEEGGGTEEEEEEEEES
T ss_pred HCCceEEEEEecCCCCCeEEEEEEEC
Confidence 33333445566787655 566664
No 31
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=3.5e-17 Score=123.39 Aligned_cols=117 Identities=19% Similarity=0.187 Sum_probs=92.1
Q ss_pred HHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 11 LMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 11 ~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
++..++.. .++.+|||||||+|.++.++++..+ .++++||++|++++.|+++....+ .++.++.+|+.+....+
T Consensus 49 ~m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~ 124 (236)
T 3orh_A 49 YMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp HHHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS
T ss_pred HHHHHHHhhccCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccc
Confidence 44444433 4567999999999999999988643 589999999999999999987765 46889999998776554
Q ss_pred hhcccCCCceeEEEEeCC--------ccchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 89 LKYSENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
..++||.|+.|.. ..+...+++++.++|||||++++.+....+
T Consensus 125 -----~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~ 175 (236)
T 3orh_A 125 -----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWG 175 (236)
T ss_dssp -----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHH
T ss_pred -----cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCch
Confidence 2578999998842 223567889999999999999998765544
No 32
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.71 E-value=2.9e-16 Score=121.27 Aligned_cols=148 Identities=12% Similarity=0.082 Sum_probs=105.5
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CC--------CCcEEEEEcchHHHHH
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV--------DHKINFIESEALSVLD 86 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~--------~~~~~~~~~d~~~~~~ 86 (188)
...++++|||||||+|..+..+++. + ..+++++|+++++++.|++++ .. ++ .++++++.+|+.+.++
T Consensus 72 ~~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 72 AHPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp HSSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred hCCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhc
Confidence 3456789999999999999999987 5 789999999999999999988 43 32 4679999999987765
Q ss_pred HHhhcccCCCceeEEEEeCCc-----cc--hHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHHHH
Q 029780 87 QLLKYSENEGSFDYAFVDADK-----DN--YCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAILD 159 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~-----~~--~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 159 (188)
. .++||+|++|... .. ..++++.+.++|+|||+++++...... .. + ....+.+
T Consensus 149 ~-------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~-----~~---~-----~~~~~~~ 208 (281)
T 1mjf_A 149 N-------NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYL-----FT---D-----ELISAYK 208 (281)
T ss_dssp H-------CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTT-----SH---H-----HHHHHHH
T ss_pred c-------cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc-----CH---H-----HHHHHHH
Confidence 4 2689999999642 11 367899999999999999987322100 00 0 2233444
Q ss_pred HHHHhhcCCCeEEEEeecCCc---eEEEEEc
Q 029780 160 LNRSLADDPRVQLSHVALGDG---ITICRRI 187 (188)
Q Consensus 160 ~~~~~~~~~~~~~~~lp~~~G---~~~~~~~ 187 (188)
..+.+..+..+....+|..+| +.++.+.
T Consensus 209 ~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 209 EMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp HHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred HHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 444443333445556676544 7777763
No 33
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.71 E-value=3.2e-16 Score=123.69 Aligned_cols=119 Identities=22% Similarity=0.402 Sum_probs=93.2
Q ss_pred HHHHHHH--HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CC-CCcEEEEEcchHHH
Q 029780 10 QLMAMLL--RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSV 84 (188)
Q Consensus 10 ~~l~~l~--~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~ 84 (188)
++|..+. ...++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++... ++ .++++++++|+.+.
T Consensus 108 e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~ 186 (334)
T 1xj5_A 108 EMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF 186 (334)
T ss_dssp HHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH
Confidence 4444443 235678999999999999999998754 689999999999999999998753 33 35799999999887
Q ss_pred HHHHhhcccCCCceeEEEEeCCc----cc---hHHHHHHHHhccCcCeEEEEe-cccc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADK----DN---YCNYHERLMKLLKVGGIAVYD-NTLW 134 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~----~~---~~~~~~~~~~~L~~gG~lv~~-~~~~ 134 (188)
++.+ ..++||+|++|... .. ...+++.+.++|+|||+++++ +..|
T Consensus 187 l~~~-----~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 187 LKNA-----AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp HHTS-----CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHhc-----cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 6543 13689999998531 11 468999999999999999996 4444
No 34
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.71 E-value=5.4e-16 Score=117.00 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=88.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++...+ +.+|+++|+++++++.++++++..++. +++++++|+.+..... . ..++|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~-~---~~~~f 142 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRK-D---VRESY 142 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCT-T---TTTCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccc-c---ccCCc
Confidence 3678999999999999999997655 789999999999999999999998876 4999999997642100 0 03689
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|+|++.. ..+...+++.+.++|+|||.+++.
T Consensus 143 D~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 143 DIVTARA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEEC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 9999987 456788999999999999999885
No 35
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.71 E-value=3.6e-16 Score=113.12 Aligned_cols=120 Identities=22% Similarity=0.228 Sum_probs=99.1
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
+..+....+...+...++.+|||+|||+|..+..++... .+++++|+++++++.+++++...++.++++++++|..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 344555555555566778899999999999999999864 69999999999999999999988876789999999876
Q ss_pred HHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 84 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++. .++||+|+++....+...+++.+.++|+|||.+++....
T Consensus 94 ~~~~-------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 94 ALCK-------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp HHTT-------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred hccc-------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 4332 268999999876667789999999999999999986543
No 36
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.71 E-value=1.6e-16 Score=116.91 Aligned_cols=118 Identities=13% Similarity=0.105 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC-CcEEEEEcchHHHHHHH
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQL 88 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~ 88 (188)
.++..+....++.+|||+|||+|..+..++... ..+|+++|+++++++.|+++++..++. ++++++++|+.+..+.+
T Consensus 43 ~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 120 (201)
T 2ift_A 43 TLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP 120 (201)
T ss_dssp HHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC
T ss_pred HHHHHHHHhcCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh
Confidence 334444333477899999999999999877652 359999999999999999999998874 57999999997764321
Q ss_pred hhcccCCCc-eeEEEEeCC--ccchHHHHHHH--HhccCcCeEEEEecccc
Q 029780 89 LKYSENEGS-FDYAFVDAD--KDNYCNYHERL--MKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 89 ~~~~~~~~~-~D~i~id~~--~~~~~~~~~~~--~~~L~~gG~lv~~~~~~ 134 (188)
..++ ||+|+++.. .......++.+ .++|+|||.+++.....
T Consensus 121 -----~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 121 -----QNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp -----CSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred -----ccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 1367 999999865 34456777887 56899999999865443
No 37
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.70 E-value=5.8e-16 Score=112.07 Aligned_cols=103 Identities=13% Similarity=0.109 Sum_probs=83.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..+++. +.+|+++|+++++++.|+++++..++ +++++++++..+.. .+ ..++|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~-~~-----~~~~f 90 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLD-HY-----VREPI 90 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGG-GT-----CCSCE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHH-hh-----ccCCc
Confidence 46679999999999999999986 67999999999999999999998887 67999997765432 22 14689
Q ss_pred eEEEEeC-C-----------ccchHHHHHHHHhccCcCeEEEEec
Q 029780 99 DYAFVDA-D-----------KDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 99 D~i~id~-~-----------~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
|+|+++. . .......++.+.++|||||.+++..
T Consensus 91 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 91 RAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999872 1 1233467789999999999998853
No 38
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.70 E-value=6.4e-16 Score=110.10 Aligned_cols=106 Identities=13% Similarity=0.128 Sum_probs=86.8
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..+++..+ +++++|+++++++.+++++...++ +++++++|+.+.++..... .++||
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~---~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ---GERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc---CCceE
Confidence 778999999999999999998743 599999999999999999998876 6999999998866554321 34899
Q ss_pred EEEEeCCc-cchHHHHHHHH--hccCcCeEEEEeccc
Q 029780 100 YAFVDADK-DNYCNYHERLM--KLLKVGGIAVYDNTL 133 (188)
Q Consensus 100 ~i~id~~~-~~~~~~~~~~~--~~L~~gG~lv~~~~~ 133 (188)
+|+++... ......++.+. ++|+|||.+++....
T Consensus 113 ~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 99998533 45556777777 999999999986544
No 39
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.70 E-value=8.8e-16 Score=118.17 Aligned_cols=122 Identities=20% Similarity=0.192 Sum_probs=97.4
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
..++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.+....+
T Consensus 72 s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 72 SMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYL 150 (274)
T ss_dssp GGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHH
T ss_pred HHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhh
Confidence 345555666677889999999999999999998763489999999999999999999998876 6999999998764432
Q ss_pred hhcccCCCceeEEEEeCCc---------------------cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 89 LKYSENEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
... .++||+|++|.+. .....+++.+.++|||||.+++.....
T Consensus 151 ~~~---~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 151 LKN---EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHT---TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhc---cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 111 3689999999432 233678899999999999999875543
No 40
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.69 E-value=5.4e-16 Score=114.17 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=85.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..++.++... ..+|+++|+++++++.|+++++..++ ++++++++|+.+.++.. .++|
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~------~~~f 123 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK------GTPH 123 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC------CCCE
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc------CCCC
Confidence 377899999999999999877652 35999999999999999999998887 57999999998765431 4689
Q ss_pred eEEEEeCC--ccchHHHHHHHHh--ccCcCeEEEEeccc
Q 029780 99 DYAFVDAD--KDNYCNYHERLMK--LLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~--~~~~~~~~~~~~~--~L~~gG~lv~~~~~ 133 (188)
|+|+++.. .......++.+.+ +|+|||.+++....
T Consensus 124 D~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 124 NIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 99999865 3345567777755 59999999886544
No 41
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.69 E-value=3.9e-16 Score=116.32 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=87.7
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
+..+|||||||+|..+..+|...+ +.+|++||++++++..|++++...++. +++++++|+.+.++... ..++||
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~----~~~~~d 107 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMI----PDNSLR 107 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHS----CTTCEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHc----CCCChh
Confidence 457999999999999999999877 789999999999999999999988876 49999999988766532 247999
Q ss_pred EEEEeC---Ccc--ch------HHHHHHHHhccCcCeEEEEe
Q 029780 100 YAFVDA---DKD--NY------CNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 100 ~i~id~---~~~--~~------~~~~~~~~~~L~~gG~lv~~ 130 (188)
.|++.. ++. +. ..+++.+.++|||||.+++.
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 999862 221 11 25899999999999998874
No 42
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.68 E-value=2.3e-15 Score=115.92 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=87.6
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
.++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++... ++ .++++++.+|+.+.++.. .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~------~ 146 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS------E 146 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC------C
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------C
Confidence 4678999999999999999998643 679999999999999999987642 33 368999999998876542 4
Q ss_pred CceeEEEEeCCccc-------hHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
++||+|++|..... ..++++.+.++|+|||++++..
T Consensus 147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 78999999864321 2678999999999999999974
No 43
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=1.7e-16 Score=120.30 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
..+.+...+...++.+|||+|||+|..+..++... +.+++++|+++++++.++++++..++.++++++++|+.+...
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~- 100 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA- 100 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-
Confidence 33333334455677899999999999999999876 569999999999999999999998887789999999865311
Q ss_pred HhhcccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
.++||+|++... ..+...+++++.++|||||.+++.+..+
T Consensus 101 -------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 101 -------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp -------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred -------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 378999998642 2356788999999999999999987655
No 44
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.68 E-value=1.1e-16 Score=121.50 Aligned_cols=116 Identities=22% Similarity=0.279 Sum_probs=95.0
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
.++..+....++.+|||+|||+|..+..+++..+ ++++++|+++.+++.+++++...++.++++++++|+.+. + +
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~- 110 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-P-F- 110 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-S-S-
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-C-C-
Confidence 3344333455677999999999999999999875 499999999999999999999999888899999998543 1 1
Q ss_pred hcccCCCceeEEEEeCC--ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 90 KYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..++||+|++... +-+...+++.+.++|+|||.+++.+..+
T Consensus 111 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 111 ----QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp ----CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred ----CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 2478999998742 2257789999999999999999988664
No 45
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.68 E-value=6.2e-16 Score=120.68 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=87.4
Q ss_pred cCCC--EEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 19 VNAK--KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 19 ~~~~--~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
.+++ +|||||||+|..+..+++.++ +.++++||+++++++.|++++.... .++++++++|+.+++..+ ..+
T Consensus 86 p~p~~~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~-----~~~ 158 (317)
T 3gjy_A 86 QDASKLRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESF-----TPA 158 (317)
T ss_dssp SCGGGCEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTC-----CTT
T ss_pred CCCCCCEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhc-----cCC
Confidence 4444 999999999999999999877 7799999999999999999875432 468999999999877543 136
Q ss_pred ceeEEEEeCCcc-----c--hHHHHHHHHhccCcCeEEEEec
Q 029780 97 SFDYAFVDADKD-----N--YCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 97 ~~D~i~id~~~~-----~--~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+||+|++|.... . ..++++.+.++|+|||+++++.
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 899999985221 1 2689999999999999999875
No 46
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.68 E-value=1.4e-15 Score=124.55 Aligned_cols=119 Identities=16% Similarity=0.233 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.+.++..++...++.+|||+|||+|..+..+|..++..++|+++|+++++++.+++++++.|+. +.++++|+.+....
T Consensus 89 ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 89 SAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEA 166 (464)
T ss_dssp TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHH
T ss_pred HHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhh
Confidence 3456666667778889999999999999999998875689999999999999999999999986 89999999876433
Q ss_pred HhhcccCCCceeEEEEeCCcc---------c----------------hHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDADKD---------N----------------YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+ .++||+|++|.+.. + ...+++.+.++|||||.+++....+
T Consensus 167 ~------~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 167 F------GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp H------CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred c------cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 3 47899999985421 1 1567888999999999999865554
No 47
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.67 E-value=2.5e-16 Score=120.17 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=94.1
Q ss_pred HHHHHHHHHHc-CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 9 GQLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 9 ~~~l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
+.+|..++... ++.+|||+|||+|..+..++...+ .+|+++|+++.+++.|++++..+++.++++++++|+.+....
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 45666666666 788999999999999999998754 399999999999999999999999988899999999876432
Q ss_pred HhhcccCCCceeEEEEeCCc-----------------------cchHHHHHHHHhccCcCeEEEE
Q 029780 88 LLKYSENEGSFDYAFVDADK-----------------------DNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~-----------------------~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
+ ..++||+|+++.+. .....+++.+.++|+|||.+++
T Consensus 115 ~-----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 115 I-----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp S-----CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred h-----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 2 14789999997431 1235688999999999999998
No 48
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=1.7e-16 Score=115.92 Aligned_cols=109 Identities=11% Similarity=0.162 Sum_probs=90.0
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..+++.+.+.++++++|+++++++.|+++++..++.++++++++|+.+..... .+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~ 92 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI------DC 92 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC------CS
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc------cC
Confidence 345667999999999999999999864467999999999999999999999888778999999986653221 47
Q ss_pred ceeEEEEeCCc------------cchHHHHHHHHhccCcCeEEEEec
Q 029780 97 SFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 97 ~~D~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+||+|+++... .....+++.+.++|+|||.+++..
T Consensus 93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 89999988421 133578999999999999999864
No 49
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=1.6e-15 Score=111.44 Aligned_cols=114 Identities=15% Similarity=0.189 Sum_probs=93.4
Q ss_pred HHHHHHHHHH-HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 8 AGQLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 8 ~~~~l~~l~~-~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
...++..+.. ..++.+|||+|||+|..+..+++. + ..+++++|+++.+++.|++++...+..+ ++++.+|..+..
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC-
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC-
Confidence 3444454444 346679999999999999998874 3 5699999999999999999999888765 999999986531
Q ss_pred HHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 87 QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++||+|+++........+++.+.++|+|||.+++.+..
T Consensus 123 --------~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 123 --------DGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp --------CSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred --------CCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 478999999987777778889999999999999996544
No 50
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.67 E-value=1.2e-16 Score=122.23 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=91.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||||||+|..+..++.. + ..+++++|+++.+++.+++++...++.++++++++|..+.. + ..++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~-----~~~~ 114 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F-----RNEE 114 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C-----CTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C-----CCCC
Confidence 456789999999999999999987 3 67999999999999999999999998888999999986531 1 2478
Q ss_pred eeEEEEeCC--ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 98 FDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
||+|++... +-+...+++.+.++|+|||.+++.+..+
T Consensus 115 fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 115 LDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp EEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 999998753 2256788999999999999999988765
No 51
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.67 E-value=2.4e-15 Score=116.93 Aligned_cols=107 Identities=17% Similarity=0.187 Sum_probs=86.3
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh--cCC-CCcEEEEEcchHHHHHHHhhcccC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK--AGV-DHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~--~~~-~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
..++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++.. .++ .++++++.+|+.+.++..
T Consensus 88 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 160 (296)
T 1inl_A 88 HPNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF------ 160 (296)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC------
Confidence 34678999999999999999998754 68999999999999999999764 223 357999999998765432
Q ss_pred CCceeEEEEeCCcc--------chHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKD--------NYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~--------~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++||+|++|.... ...++++.+.++|+|||++++..
T Consensus 161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 46899999986432 23688999999999999999963
No 52
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.67 E-value=1.2e-14 Score=110.63 Aligned_cols=115 Identities=19% Similarity=0.244 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHH-cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 6 PDAGQLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 6 ~~~~~~l~~l~~~-~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
+.+..++..+... .++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++..+++. +++..+|..+.
T Consensus 105 ~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~ 179 (254)
T 2nxc_A 105 ETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA 179 (254)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc
Confidence 3344455555443 46779999999999999998885 349999999999999999999988865 88999998764
Q ss_pred HHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
++ .++||+|+++........++..+.++|+|||.+++.+..
T Consensus 180 ~~--------~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 180 LP--------FGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp GG--------GCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Cc--------CCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 22 368999999876666778899999999999999997654
No 53
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.67 E-value=3.2e-15 Score=115.03 Aligned_cols=117 Identities=20% Similarity=0.270 Sum_probs=96.5
Q ss_pred cHHHHHHHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchH
Q 029780 5 APDAGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL 82 (188)
Q Consensus 5 ~~~~~~~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 82 (188)
.+++..++..++.. .++.+|||+|||+|..+..++...+ +.+++++|+++++++.+++++...++. +++++++|..
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 46677777777765 4567999999999999999998876 789999999999999999999988876 6999999987
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCc----------------------------cchHHHHHHHHhccCcCeEEEEec
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADK----------------------------DNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~----------------------------~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+.++ .++||+|+++.+. ..+..+++.+.++|+|||++++..
T Consensus 170 ~~~~--------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 170 SALA--------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp GGGT--------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hhcc--------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6421 3689999997321 234677888999999999999863
No 54
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.66 E-value=2.1e-16 Score=120.81 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=93.5
Q ss_pred HHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh---cCCCCcEEEEEcchHHHHHH
Q 029780 11 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 11 ~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~ 87 (188)
+|..++...++.+|||+|||+|..++.++...+ +.+|+++|+++++++.|++++.. +++.++++++++|..+..+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~ 105 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKA 105 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhh
Confidence 445555555677999999999999999999876 78999999999999999999988 88877899999999776442
Q ss_pred HhhcccCCCceeEEEEeCCc---------------------cchHHHHHHHHhccCcCeEEEEe
Q 029780 88 LLKYSENEGSFDYAFVDADK---------------------DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~---------------------~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
........++||+|+++.+. .....+++.+.++|+|||.+++.
T Consensus 106 ~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 106 RVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp HHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 21100124689999998321 12567889999999999999873
No 55
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.66 E-value=1.7e-15 Score=117.84 Aligned_cols=114 Identities=9% Similarity=0.095 Sum_probs=94.2
Q ss_pred HHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 10 QLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 10 ~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
+.+..++. ..++.+|||||||+|..+..+++..+ .+|+++|+++++++.+++++...++.++++++.+|..+.
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-- 134 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--
Confidence 34444444 34667999999999999999998753 699999999999999999999999888899999998654
Q ss_pred HHhhcccCCCceeEEEEeCCc------------cchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 87 QLLKYSENEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
.++||+|++.... .....+++.+.++|+|||.+++.+....
T Consensus 135 --------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 135 --------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp --------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred --------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 3789999987532 2337899999999999999999877653
No 56
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.66 E-value=8.7e-15 Score=115.50 Aligned_cols=109 Identities=16% Similarity=0.234 Sum_probs=89.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.++.+|||+|||+|..++.++.. +.+|+++|+++.+++.|++|++.+++.+ +++++++|+.+.++..... .++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~---~~~ 225 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR---GST 225 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH---TCC
T ss_pred CCCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc---CCC
Confidence 45679999999999999999985 4599999999999999999999988876 5999999998876553221 368
Q ss_pred eeEEEEeCCc-------------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 98 FDYAFVDADK-------------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 98 ~D~i~id~~~-------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
||+|++|.+. ..+..+++.+.++|+|||++++....
T Consensus 226 fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 226 YDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp BSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9999998642 12567888899999999997775444
No 57
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.66 E-value=2.9e-16 Score=119.23 Aligned_cols=116 Identities=21% Similarity=0.273 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+.....+...+...++.+|||+|||+|..+..++..+.+..+++++|+++++++.|+++++..++.++++++++|+.+.+
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 34445555556677888999999999999999999844478999999999999999999999998888999999987542
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..++||+|+++. .....+++.+.+.|+|||.+++..
T Consensus 159 --------~~~~~D~v~~~~--~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 159 --------EEENVDHVILDL--PQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp --------CCCSEEEEEECS--SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --------CCCCcCEEEECC--CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 246799999974 344678999999999999999864
No 58
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.66 E-value=6.8e-16 Score=117.24 Aligned_cols=104 Identities=19% Similarity=0.278 Sum_probs=87.9
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..++.++...+ +.+|+++|+++++++.++++++..++.+ ++++++|+.+..... ...++||
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~----~~~~~fD 153 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREA----GHREAYA 153 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTST----TTTTCEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhccc----ccCCCce
Confidence 467999999999999999999876 7899999999999999999999999865 999999997653210 0137899
Q ss_pred EEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 100 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 100 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+|++.+. .+...+++.+.++|+|||.+++-
T Consensus 154 ~I~s~a~-~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 154 RAVARAV-APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp EEEEESS-CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCc-CCHHHHHHHHHHHcCCCeEEEEE
Confidence 9999864 35678899999999999998873
No 59
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.66 E-value=4.1e-15 Score=116.88 Aligned_cols=107 Identities=19% Similarity=0.295 Sum_probs=87.7
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
..++++|||||||+|..+..+++..+ ..+++++|+++++++.|++++... ++ .++++++.+|+.+.++..
T Consensus 114 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~------ 186 (321)
T 2pt6_A 114 SKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV------ 186 (321)
T ss_dssp SSSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC------
T ss_pred CCCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc------
Confidence 45678999999999999999998654 689999999999999999998652 23 357999999998876542
Q ss_pred CCceeEEEEeCCc-----cc-h-HHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADK-----DN-Y-CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~-----~~-~-~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++||+|++|... .. + .++++.+.+.|+|||++++..
T Consensus 187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 4789999998631 11 1 688999999999999999963
No 60
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=8e-15 Score=105.30 Aligned_cols=113 Identities=20% Similarity=0.155 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+.....+...+...++.+|||+|||+|..+..++. + ..+++++|+++++++.+++++...++ ++++++++|..+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~ 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVL 96 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccc
Confidence 44444444455556778999999999999999998 3 78999999999999999999998887 46999999987732
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+ .++||+|+++.. .....+++.+.++ |||.+++....
T Consensus 97 ~--------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 97 D--------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp G--------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEESC
T ss_pred c--------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEecc
Confidence 2 368999999876 6778888998888 99999987543
No 61
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.66 E-value=8.8e-16 Score=111.26 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=90.5
Q ss_pred HHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHh
Q 029780 11 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLL 89 (188)
Q Consensus 11 ~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 89 (188)
.+...+...++.+|||+|||+|..+..++.. +.+++++|+++++++.+++++...++.+ +++++.+|..+..+
T Consensus 43 ~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--- 116 (194)
T 1dus_A 43 ILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--- 116 (194)
T ss_dssp HHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT---
T ss_pred HHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc---
Confidence 3333334457789999999999999999987 5799999999999999999999888764 59999999866321
Q ss_pred hcccCCCceeEEEEeCCc----cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 90 KYSENEGSFDYAFVDADK----DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~----~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++||+|+++... .....+++.+.++|+|||.+++....
T Consensus 117 -----~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 117 -----DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp -----TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred -----cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 3689999998642 34567889999999999999987544
No 62
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.66 E-value=5e-16 Score=115.81 Aligned_cols=113 Identities=11% Similarity=0.104 Sum_probs=92.5
Q ss_pred HHHHHHHcC-CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029780 12 MAMLLRLVN-AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 90 (188)
Q Consensus 12 l~~l~~~~~-~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 90 (188)
|++++...+ +.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|++|++.+++.++++++.+|..+.++.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--- 81 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--- 81 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---
Confidence 555666554 45899999999999999999765 6799999999999999999999999998999999999764331
Q ss_pred cccCCCceeEEEEeC-CccchHHHHHHHHhccCcCeEEEEecc
Q 029780 91 YSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 91 ~~~~~~~~D~i~id~-~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..+||+|++.+ .......+++...+.|+++|++|+.-.
T Consensus 82 ----~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 ----TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ----CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 12699998764 233467888999999999999998643
No 63
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=6.1e-16 Score=114.11 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=90.5
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+.....+...+...++.+|||+|||+|..+..+++. +.+++++|+++++++.+++++...++. +++++.+|+.+.
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~ 137 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQG 137 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccC
Confidence 3445555555556678889999999999999999987 579999999999999999999998876 699999998764
Q ss_pred HHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
... .++||+|+++....... +.+.++|+|||.+++.
T Consensus 138 ~~~-------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 138 WQA-------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CGG-------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred Ccc-------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 322 37899999986444332 3678999999999985
No 64
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.65 E-value=2e-15 Score=112.84 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=92.2
Q ss_pred HHHHHHHc-CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029780 12 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 90 (188)
Q Consensus 12 l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 90 (188)
|+.++... ++.+|+|||||+|+.++.+++..+ ..+|+++|+++.+++.|++|++.+++.++++++.+|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~--- 87 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE--- 87 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc---
Confidence 44555554 455899999999999999999754 6789999999999999999999999998999999999875422
Q ss_pred cccCCCceeEEEEeC-CccchHHHHHHHHhccCcCeEEEEec
Q 029780 91 YSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 91 ~~~~~~~~D~i~id~-~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+||+|++.+ ...-...+++...+.|+++|.+|+..
T Consensus 88 ----~~~~D~IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 88 ----ADNIDTITICGMGGRLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ----ccccCEEEEeCCchHHHHHHHHHHHHHhCcCCEEEEEC
Confidence 23799998764 33456778888889999999999875
No 65
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=5.1e-16 Score=114.39 Aligned_cols=121 Identities=15% Similarity=0.235 Sum_probs=77.4
Q ss_pred CcHHHHHHHHHHHHH----cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc
Q 029780 4 TAPDAGQLMAMLLRL----VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 79 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~----~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 79 (188)
..+++..++..++.. .++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.+++++...+. +++++++
T Consensus 10 p~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~ 86 (215)
T 4dzr_A 10 PRPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAA 86 (215)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHH
T ss_pred CCccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEc
Confidence 456777777777765 5677999999999999999999876 78999999999999999999888775 6889999
Q ss_pred chHHHHHHHhhcccCCCceeEEEEeCCcc-----------------------------chHHHHHHHHhccCcCeE-EEE
Q 029780 80 EALSVLDQLLKYSENEGSFDYAFVDADKD-----------------------------NYCNYHERLMKLLKVGGI-AVY 129 (188)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~D~i~id~~~~-----------------------------~~~~~~~~~~~~L~~gG~-lv~ 129 (188)
|+.+.++.... ..++||+|+++.+.. .+..+++.+.++|+|||. +++
T Consensus 87 d~~~~~~~~~~---~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 87 DGIEWLIERAE---RGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHHHHHHHHH---TTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred chHhhhhhhhh---ccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 98875443111 137899999963210 015667777899999999 555
Q ss_pred e
Q 029780 130 D 130 (188)
Q Consensus 130 ~ 130 (188)
.
T Consensus 164 ~ 164 (215)
T 4dzr_A 164 E 164 (215)
T ss_dssp E
T ss_pred E
Confidence 3
No 66
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.65 E-value=2.4e-15 Score=111.54 Aligned_cols=105 Identities=14% Similarity=0.281 Sum_probs=86.5
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||||||+|..+..+|+..+ +.+++++|++++++..|++++...++. +++++++|+.+....+ ..++|
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~-----~~~~~ 109 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVF-----EPGEV 109 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHC-----CTTSC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhc-----CcCCc
Confidence 3567999999999999999999876 789999999999999999999988874 5999999998742222 24689
Q ss_pred eEEEEeCC---cc--c------hHHHHHHHHhccCcCeEEEEe
Q 029780 99 DYAFVDAD---KD--N------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 99 D~i~id~~---~~--~------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|.|++... .. + ...+++.+.++|+|||.+++.
T Consensus 110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 99988632 11 0 367899999999999999875
No 67
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.64 E-value=5.1e-15 Score=109.67 Aligned_cols=112 Identities=19% Similarity=0.281 Sum_probs=92.2
Q ss_pred HHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 16 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
+...++.+|||+|||+|..+..+++..++..+++++|+++++++.+++++...++. +++++.+|..+.. + ..
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~~ 104 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L-----PD 104 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S-----CS
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C-----CC
Confidence 34567789999999999999999998744689999999999999999999888876 6999999986531 1 24
Q ss_pred CceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 96 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 96 ~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
++||+|++... ..+...+++.+.++|+|||.+++.+....
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 78999998753 34567899999999999999999765543
No 68
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.64 E-value=1.4e-15 Score=118.12 Aligned_cols=107 Identities=19% Similarity=0.222 Sum_probs=84.8
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC---C-CCcEEEEEcchHHHHHHHhhccc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---V-DHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~-~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
..++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++...+ + .++++++.+|+.+.+...
T Consensus 81 ~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~----- 154 (294)
T 3adn_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp STTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-----
T ss_pred CCCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-----
Confidence 35678999999999999999998754 6799999999999999999987642 2 357999999998776532
Q ss_pred CCCceeEEEEeCCccc-------hHHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++||+|++|..... ..++++.+.+.|+|||++++..
T Consensus 155 -~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 155 -SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -CCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred -CCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 478999999853211 1678999999999999999864
No 69
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=1.5e-15 Score=112.57 Aligned_cols=104 Identities=16% Similarity=0.311 Sum_probs=86.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..++...+ +.+++++|+++.+++.|++++...++ ++++++++|+.+. +... ..++||
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~-~~~~----~~~~~D 113 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDL-TDYF----EDGEID 113 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCG-GGTS----CTTCCS
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHH-Hhhc----CCCCCC
Confidence 467999999999999999999887 78999999999999999999998887 5799999998763 2211 246899
Q ss_pred EEEEeCCcc-----------chHHHHHHHHhccCcCeEEEEe
Q 029780 100 YAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 100 ~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+|++..... ....+++.+.++|+|||.+++.
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 999885321 1357899999999999999884
No 70
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=1.3e-15 Score=114.53 Aligned_cols=116 Identities=18% Similarity=0.177 Sum_probs=88.0
Q ss_pred HHHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 10 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 10 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.++..++.. .++.+|||+|||+|..+..++... ..+++++|+++++++.|+++.+..+ .+++++++|+.+..+.
T Consensus 48 ~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~ 123 (236)
T 1zx0_A 48 PYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPT 123 (236)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGG
T ss_pred HHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcc
Confidence 344444443 456799999999999999997642 3489999999999999999887665 5799999999876433
Q ss_pred HhhcccCCCceeEEEEeCC--------ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+ ..++||+|++|.. ......+++++.++|||||.+++.+...
T Consensus 124 ~-----~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 173 (236)
T 1zx0_A 124 L-----PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTS 173 (236)
T ss_dssp S-----CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHH
T ss_pred c-----CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCc
Confidence 3 2478999999421 1122356899999999999999876553
No 71
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.64 E-value=8.4e-16 Score=113.51 Aligned_cols=116 Identities=18% Similarity=0.275 Sum_probs=93.3
Q ss_pred HHHHHHHHHc--CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 10 QLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 10 ~~l~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.+...++... ++.+|||+|||+|..+..+++. + +.+++++|+++.+++.+++++...++.++++++++|..+..
T Consensus 31 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-- 106 (219)
T 3dlc_A 31 IIAENIINRFGITAGTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-- 106 (219)
T ss_dssp HHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--
Confidence 3444444332 2339999999999999999987 4 68999999999999999999999988888999999986531
Q ss_pred HhhcccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+ ..++||+|++... ..+...+++++.++|+|||.+++.+...
T Consensus 107 ~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 107 I-----EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred C-----CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 1 2478999999753 3456789999999999999999976554
No 72
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.64 E-value=4.3e-15 Score=121.42 Aligned_cols=120 Identities=16% Similarity=0.194 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.+.++..++...++.+|||+|||+|..+..+|..++..++|+++|+++++++.+++++++.|+. ++.++++|+.+....
T Consensus 93 ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 93 SAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPH 171 (456)
T ss_dssp TTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhh
Confidence 4456666777778889999999999999999988765689999999999999999999999986 599999999876543
Q ss_pred HhhcccCCCceeEEEEeCCcc-------------------------chHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDADKD-------------------------NYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~~-------------------------~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+ .++||.|++|.+.. ....+++.+.++|||||.|+......
T Consensus 172 ~------~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 172 F------SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp H------TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred c------cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 3 47899999996421 01267888899999999999866554
No 73
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.64 E-value=3.1e-15 Score=111.78 Aligned_cols=137 Identities=17% Similarity=0.194 Sum_probs=99.6
Q ss_pred HcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 18 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 18 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
..++.+|||+||| +|..+..+++.. +.+|+++|+++++++.|++++...++ +++++++|+... ..+ ..+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~-~~~-----~~~ 122 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGII-KGV-----VEG 122 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSS-TTT-----CCS
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhh-hhc-----ccC
Confidence 4577899999999 999999999874 57999999999999999999999887 699999996322 111 137
Q ss_pred ceeEEEEeCCc----------------------cchHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchH
Q 029780 97 SFDYAFVDADK----------------------DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSR 154 (188)
Q Consensus 97 ~~D~i~id~~~----------------------~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~ 154 (188)
+||+|+++.+. ..+..+++.+.++|+|||.+++.-... .
T Consensus 123 ~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------------~ 183 (230)
T 3evz_A 123 TFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-------------------E 183 (230)
T ss_dssp CEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-------------------H
T ss_pred ceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-------------------H
Confidence 89999987421 113678999999999999998842111 1
Q ss_pred HHHHHHHHHhhcCCCeEEEEeecCCceEEE
Q 029780 155 QAILDLNRSLADDPRVQLSHVALGDGITIC 184 (188)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~lp~~~G~~~~ 184 (188)
....++.+.+.+. ++....+.+..|..+.
T Consensus 184 ~~~~~~~~~l~~~-g~~~~~~~~~~g~~~~ 212 (230)
T 3evz_A 184 KLLNVIKERGIKL-GYSVKDIKFKVGTRWR 212 (230)
T ss_dssp HHHHHHHHHHHHT-TCEEEEEEECCCC-CE
T ss_pred hHHHHHHHHHHHc-CCceEEEEecCCCeEE
Confidence 1144555555444 5666666666665443
No 74
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.64 E-value=6.6e-15 Score=118.42 Aligned_cols=110 Identities=11% Similarity=0.197 Sum_probs=90.1
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.++++|||+|||+|..++.+|... ..+|+++|+++++++.|++|++.+++.+ +++++++|+.+.++.+... ..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~---~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH---HLT 285 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT---TCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh---CCC
Confidence 577899999999999999999852 3489999999999999999999999875 7999999999877765432 358
Q ss_pred eeEEEEeCCcc------------chHHHHHHHHhccCcCeEEEEeccc
Q 029780 98 FDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 98 ~D~i~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
||+|++|.+.. .+..++..+.++|+|||.+++....
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99999985431 1344667778999999999987543
No 75
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=9.4e-16 Score=117.89 Aligned_cols=119 Identities=15% Similarity=0.133 Sum_probs=96.8
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+...+.+..+....++.+|||+|||+|..++.+|+..+ .++|+++|+++++++.|+++++.+++. ++.++++|+.+.
T Consensus 104 ~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~ 181 (272)
T 3a27_A 104 QGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDV 181 (272)
T ss_dssp GGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGC
T ss_pred CCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHc
Confidence 333444444444566778999999999999999999865 679999999999999999999998876 488999999765
Q ss_pred HHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+. .++||+|+++... ....++..+.+.|+|||++++.+...
T Consensus 182 -~~-------~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 182 -EL-------KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -CC-------TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -Cc-------cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 32 3689999999754 56778899999999999999876553
No 76
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.63 E-value=4.7e-15 Score=114.70 Aligned_cols=115 Identities=19% Similarity=0.276 Sum_probs=93.3
Q ss_pred cHHHHHHHHHHHHH---cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 5 APDAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 5 ~~~~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
.+++..++..++.. .++.+|||+|||+|..++.++.. + +.+|+++|+++++++.|++++...++.++++++++|.
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~ 182 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEF 182 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESST
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcc
Confidence 45666666665543 35679999999999999999998 5 8899999999999999999999999887899999999
Q ss_pred HHHHHHHhhcccCCCce---eEEEEeCCcc----------------------chHHHHHHHH-hccCcCeEEEEe
Q 029780 82 LSVLDQLLKYSENEGSF---DYAFVDADKD----------------------NYCNYHERLM-KLLKVGGIAVYD 130 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~---D~i~id~~~~----------------------~~~~~~~~~~-~~L~~gG~lv~~ 130 (188)
.+.++ ++| |+|+++.+.. +...+++.+. +.|+|||++++.
T Consensus 183 ~~~~~---------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 183 LEPFK---------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TGGGG---------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hhhcc---------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 76421 467 9999973211 0126789999 999999999984
No 77
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.63 E-value=7.9e-15 Score=118.38 Aligned_cols=114 Identities=19% Similarity=0.267 Sum_probs=94.6
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC-CCcEEEEEcchHHHHHHHhhccc
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV-DHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
+....++.+|||+|||+|..++.++... ..+|+++|+++++++.|++|++.+++ .++++++++|+.+.++.+...
T Consensus 215 l~~~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~-- 290 (396)
T 3c0k_A 215 TRRYVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR-- 290 (396)
T ss_dssp HHHHCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT--
T ss_pred HHHhhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc--
Confidence 3344678899999999999999999852 35999999999999999999999988 657999999999887665322
Q ss_pred CCCceeEEEEeCCc------------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 94 NEGSFDYAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 94 ~~~~~D~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..+||+|++|.+. ..+..++..+.++|+|||++++.+..
T Consensus 291 -~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 291 -GEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp -TCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -CCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3689999999643 45678889999999999999886543
No 78
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.63 E-value=3e-14 Score=110.07 Aligned_cols=115 Identities=17% Similarity=0.259 Sum_probs=91.0
Q ss_pred HHHHHHHH--HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC--C-CCcEEEEEcchHHH
Q 029780 10 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--V-DHKINFIESEALSV 84 (188)
Q Consensus 10 ~~l~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--~-~~~~~~~~~d~~~~ 84 (188)
+++..+.. ..++++|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...+ + .++++++.+|+.+.
T Consensus 66 e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~ 144 (283)
T 2i7c_A 66 EMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF 144 (283)
T ss_dssp HHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH
Confidence 44544332 34678999999999999999998654 6899999999999999999876532 2 36799999999887
Q ss_pred HHHHhhcccCCCceeEEEEeCCc-----cch--HHHHHHHHhccCcCeEEEEec
Q 029780 85 LDQLLKYSENEGSFDYAFVDADK-----DNY--CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~-----~~~--~~~~~~~~~~L~~gG~lv~~~ 131 (188)
++.. .++||+|++|... ... .++++.+.++|+|||++++..
T Consensus 145 l~~~------~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 145 LENV------TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp HHHC------CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHhC------CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 6543 4789999998631 111 689999999999999999874
No 79
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.63 E-value=9.2e-16 Score=118.46 Aligned_cols=113 Identities=18% Similarity=0.279 Sum_probs=92.8
Q ss_pred HHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029780 11 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 90 (188)
Q Consensus 11 ~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 90 (188)
++..+....++.+|||+|||+|..+..++..++.+.+++++|+++.+++.+++++...+. +++++++|+.+. + +
T Consensus 13 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~-~-~-- 86 (284)
T 3gu3_A 13 LVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEI-E-L-- 86 (284)
T ss_dssp HHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTC-C-C--
T ss_pred HHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhc-C-c--
Confidence 333344556788999999999999999999887558999999999999999999877653 799999998753 1 1
Q ss_pred cccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 91 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++||+|++... ..+...+++++.++|+|||++++.+..
T Consensus 87 ----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 ----NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ----SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ----CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 368999998753 345678999999999999999987765
No 80
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.63 E-value=1.4e-14 Score=118.03 Aligned_cols=121 Identities=18% Similarity=0.213 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
.....++..++...++.+|||+|||+|..+..++...+ +++|+++|+++.+++.+++++...++ +++++++|+.+..
T Consensus 232 d~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 232 DASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPS 308 (429)
T ss_dssp CHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTH
T ss_pred CHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhch
Confidence 44566666677777888999999999999999999886 58999999999999999999999886 3788999987654
Q ss_pred HHHhhcccCCCceeEEEEeCCccc-------------------------hHHHHHHHHhccCcCeEEEEecccc
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..+ ..++||+|++|.+... ...+++.+.++|||||.+++....+
T Consensus 309 ~~~-----~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 309 QWC-----GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HHH-----TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred hhc-----ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 333 1368999999853211 1467888999999999999976554
No 81
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.63 E-value=2.8e-15 Score=117.57 Aligned_cols=120 Identities=22% Similarity=0.256 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..++. +++++++|+.+...
T Consensus 105 ~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~ 183 (315)
T 1ixk_A 105 ASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE 183 (315)
T ss_dssp HHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc
Confidence 44556666667778889999999999999999998765689999999999999999999998876 59999999876422
Q ss_pred HHhhcccCCCceeEEEEeCCccc-------------------------hHHHHHHHHhccCcCeEEEEecccc
Q 029780 87 QLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
. .++||+|++|.+... ...+++.+.++|||||.+++.....
T Consensus 184 -~------~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 184 -L------NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp -G------CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred -c------cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 1 468999999853110 1478889999999999999976543
No 82
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.63 E-value=2.3e-15 Score=112.31 Aligned_cols=116 Identities=20% Similarity=0.289 Sum_probs=89.2
Q ss_pred HHHHHHHH-HHcCCCEEEEEcccchHHHHHHHhhCC----CCCEEEEEeCCchhHHHHHHHHHhcCC----CCcEEEEEc
Q 029780 9 GQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNRETYEIGLPIIKKAGV----DHKINFIES 79 (188)
Q Consensus 9 ~~~l~~l~-~~~~~~~vLeiG~g~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~~~~~~~ 79 (188)
..++..+. ...++.+|||+|||+|+.+..+++... +.++|+++|+++++++.|++++...++ .++++++.+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 34444443 456678999999999999999999864 467999999999999999999988773 357999999
Q ss_pred chHHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 80 EALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|..+..+.... ..++||+|+++..... +++.+.++|+|||.+++.
T Consensus 148 d~~~~~~~~~~---~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 148 NIYQVNEEEKK---ELGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp CGGGCCHHHHH---HHCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred ChHhcccccCc---cCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 98764210000 0368999999875443 357788999999999986
No 83
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.62 E-value=4.1e-15 Score=114.67 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=87.3
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 100 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 100 (188)
+.+|||+|||+|..+..++.. +.+++++|+++++++.+++++...++.++++++++|..+..+ + ..++||+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~-----~~~~fD~ 139 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVAS-H-----LETPVDL 139 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGG-G-----CSSCEEE
T ss_pred CCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhh-h-----cCCCceE
Confidence 569999999999999999986 579999999999999999999988887789999999876532 1 2579999
Q ss_pred EEEeCC---ccchHHHHHHHHhccCcCeEEEEecc
Q 029780 101 AFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 101 i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|++... ..+...+++.+.++|+|||.+++...
T Consensus 140 v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 140 ILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 998753 34567899999999999999998764
No 84
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.62 E-value=1.1e-15 Score=118.57 Aligned_cols=114 Identities=15% Similarity=0.268 Sum_probs=86.7
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC----------------------------
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV---------------------------- 70 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~---------------------------- 70 (188)
.++++|||||||+|..+..++..++ ..+|+++|+++.+++.|++++...+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3678999999999999999999986 67999999999999999998665432
Q ss_pred -----------------------------CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc---c------chHH
Q 029780 71 -----------------------------DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---D------NYCN 112 (188)
Q Consensus 71 -----------------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~---~------~~~~ 112 (188)
++++++.++|..+....+.. ...++||+|++.... + ....
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~--~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVE--AQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHT--TCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCcccccc--ccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 25799999987632211111 025799999987632 1 4567
Q ss_pred HHHHHHhccCcCeEEEEeccccC
Q 029780 113 YHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 113 ~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
+++.+.++|+|||++++....|.
T Consensus 202 ~l~~~~~~LkpGG~lil~~~~~~ 224 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEPQPWS 224 (292)
T ss_dssp HHHHHHHHEEEEEEEEEECCCHH
T ss_pred HHHHHHHHhCCCcEEEEecCCch
Confidence 89999999999999999766554
No 85
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.62 E-value=2.1e-15 Score=110.93 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=86.8
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..++...+ +.+++++|+++++++.+++++...++.+ ++++++|+.+.. ..++||
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--------~~~~~D 134 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP--------SEPPFD 134 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC--------CCSCEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC--------ccCCcC
Confidence 478999999999999999999876 7899999999999999999999888765 999999986542 136899
Q ss_pred EEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 100 YAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 100 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+|++.. ..+...+++.+.++|+|||.+++.
T Consensus 135 ~i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 135 GVISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EEECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 999764 456788999999999999999986
No 86
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.62 E-value=5.2e-15 Score=114.06 Aligned_cols=105 Identities=15% Similarity=0.128 Sum_probs=89.6
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..++.+++..+ . +|+++|+++.+++.|+++++.+++.++++++++|+.+... .++|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--------~~~f 193 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------ENIA 193 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CSCE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------cCCc
Confidence 4578999999999999999999754 2 8999999999999999999999988889999999976532 3789
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
|+|+++... ....+++.+.++|+|||.+++.+...
T Consensus 194 D~Vi~~~p~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 194 DRILMGYVV-RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp EEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cEEEECCch-hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 999998653 44678899999999999999976553
No 87
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.62 E-value=6.6e-15 Score=118.81 Aligned_cols=109 Identities=23% Similarity=0.335 Sum_probs=91.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..++.++.. . ..+|+++|+++++++.|+++++.+++.++++++++|+.+.++.+... ..+||
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~---~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK---GEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh---CCCCC
Confidence 7789999999999999999986 2 45999999999999999999999988768999999998877654322 46899
Q ss_pred EEEEeCCc------------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 100 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 100 ~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+|++|.+. ..+..++..+.++|+|||.+++....
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 99999643 34567888999999999988876543
No 88
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=3.2e-15 Score=114.43 Aligned_cols=119 Identities=16% Similarity=0.287 Sum_probs=95.9
Q ss_pred HHHHHHHHHHH---cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 8 AGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 8 ~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
..+++..++.. .++.+|||+|||+|..+..+++.. +.+++++|+++++++.+++++...++.++++++.+|..+.
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 33444445443 466799999999999999999875 5799999999999999999999988888899999998653
Q ss_pred HHHHhhcccCCCceeEEEEeC---CccchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 85 LDQLLKYSENEGSFDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
+ + ..++||+|++.. +..+...+++.+.++|+|||.+++.+....
T Consensus 124 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 170 (273)
T 3bus_A 124 -P-F-----EDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLL 170 (273)
T ss_dssp -C-S-----CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEES
T ss_pred -C-C-----CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeecc
Confidence 1 1 246899999874 334567899999999999999999876643
No 89
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.62 E-value=4.1e-15 Score=112.03 Aligned_cols=107 Identities=18% Similarity=0.215 Sum_probs=83.8
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh------cCCCCcEEEEEcchHHHHHHHhhc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKY 91 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~ 91 (188)
..+..+|||||||+|..+..+|...+ +..++++|+++.+++.|++++.. .++ .++.++++|+.+.++...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~-- 119 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF-- 119 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC--
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC--
Confidence 34556899999999999999999876 78999999999999999988764 233 469999999977454332
Q ss_pred ccCCCceeEEEEeCCccc-----------hHHHHHHHHhccCcCeEEEEe
Q 029780 92 SENEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..++||.|++...... ...+++.+.++|+|||.+++.
T Consensus 120 --~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 120 --YKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp --CTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 2478999988642111 147899999999999999874
No 90
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.61 E-value=2.7e-15 Score=113.00 Aligned_cols=112 Identities=11% Similarity=0.142 Sum_probs=91.7
Q ss_pred HHHHHHHc-CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029780 12 MAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 90 (188)
Q Consensus 12 l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 90 (188)
|+.++... ++.+|+|||||+|+.++.+++..+ ..+|+++|+++.+++.|++|++.+++.+++++..+|..+.+..
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~--- 87 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK--- 87 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc---
Confidence 44555544 446999999999999999999754 6789999999999999999999999988999999998875421
Q ss_pred cccCCCceeEEEEeC-CccchHHHHHHHHhccCcCeEEEEec
Q 029780 91 YSENEGSFDYAFVDA-DKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 91 ~~~~~~~~D~i~id~-~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+||+|++.+ ...-...+++...+.|++++.+|+.-
T Consensus 88 ----~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 88 ----KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp ----GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred ----cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 13599998754 33456778888889999999999874
No 91
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.61 E-value=6.2e-15 Score=114.51 Aligned_cols=109 Identities=15% Similarity=0.104 Sum_probs=86.7
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc-CCCCcEEEEEcchHHHHHHHhh-cccCCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLK-YSENEG 96 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~-~~~~~~ 96 (188)
.++.+|||+|||+|..+..++..+++..+++++|+++.+++.|++++... +...+++++++|+.+.. +.. .....+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK--FLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG--GGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC--ccccccccCC
Confidence 46789999999999999999987634889999999999999999998886 44568999999986532 110 000026
Q ss_pred ceeEEEEeCC--ccchHHHHHHHHhccCcCeEEEE
Q 029780 97 SFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 97 ~~D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
+||+|++... +-+...+++++.++|+|||.+++
T Consensus 113 ~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 8999998742 12678899999999999999988
No 92
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.61 E-value=3e-14 Score=113.87 Aligned_cols=153 Identities=16% Similarity=0.188 Sum_probs=105.1
Q ss_pred CCCEEEEEccc------chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhc
Q 029780 20 NAKKTIEIGVF------TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKY 91 (188)
Q Consensus 20 ~~~~vLeiG~g------~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~ 91 (188)
++.+||||||| +|..++.+++.+.++++|+++|+++++. . ..++++++++|+.+. ...+...
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~---~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------V---DELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------G---CBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------h---cCCCcEEEEecccccchhhhhhcc
Confidence 67899999999 6777777776542378999999999973 1 135799999998663 2222211
Q ss_pred ccCCCceeEEEEeCCc--cchHHHHHHHHhccCcCeEEEEeccccCcc--ccCCCCCCCCCcccchHHHHHHHHHHhhcC
Q 029780 92 SENEGSFDYAFVDADK--DNYCNYHERLMKLLKVGGIAVYDNTLWGGT--VAVPEEQVPDHFRGSSRQAILDLNRSLADD 167 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~--~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (188)
.++||+|++++.+ .+....++++.++|||||++++.|....-. ..... ......++ +...++.+.+.+...
T Consensus 286 ---d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~-~~~~~~~t-ii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 286 ---YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQA-DPQECSGT-SLGLLKSLIDAIQHQ 360 (419)
T ss_dssp ---HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCS-STTCCTTS-HHHHHHHHHHHHTGG
T ss_pred ---cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCc-cCCcchhH-HHHHHHHHHHHhccc
Confidence 3789999998644 456778999999999999999998872111 11111 00123344 777788887776642
Q ss_pred ---------CCe---EEEEeecCCceEEEEEc
Q 029780 168 ---------PRV---QLSHVALGDGITICRRI 187 (188)
Q Consensus 168 ---------~~~---~~~~lp~~~G~~~~~~~ 187 (188)
|.+ ...-+.+-+++.+..|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 361 ELPSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp GSCCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred ccCCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 122 14567788899998875
No 93
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.61 E-value=3e-15 Score=117.47 Aligned_cols=114 Identities=21% Similarity=0.336 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
.....+...+...++.+|||+|||+|..+..+++..+..++|+++|+++++++.|+++++..++.+ ++++.+|..+..+
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccc
Confidence 444444445566678899999999999999999886535789999999999999999999888765 9999999876432
Q ss_pred HHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 87 QLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
. .++||+|+++....+.. +.+.++|+|||.+++..
T Consensus 141 ~-------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 141 E-------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp G-------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred c-------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 1 36899999986544432 56788999999999964
No 94
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.60 E-value=8.1e-15 Score=120.13 Aligned_cols=122 Identities=18% Similarity=0.246 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..|+. +++++++|+.+...
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPE 324 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSS
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcch
Confidence 44566666677778889999999999999999998863489999999999999999999998875 59999999865421
Q ss_pred HHhhcccCCCceeEEEEeCCccc-------------------------hHHHHHHHHhccCcCeEEEEecccc
Q 029780 87 QLLKYSENEGSFDYAFVDADKDN-------------------------YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~~~-------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
.+ ..++||+|++|.+... ...+++.+.++|||||.+++.....
T Consensus 325 ~~-----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 325 II-----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SS-----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hh-----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 11 1267999999853211 1467899999999999999876554
No 95
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.60 E-value=1.2e-14 Score=117.94 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=90.0
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHH-------HHHHHhcCCC-CcEEEEEcchHH---
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIG-------LPIIKKAGVD-HKINFIESEALS--- 83 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a-------~~~~~~~~~~-~~~~~~~~d~~~--- 83 (188)
.+...++.+|||+|||+|..++.+|...+ ..+|+++|+++++++.| ++++...++. .+++++++|...
T Consensus 237 ~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 237 QCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNN 315 (433)
T ss_dssp HTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCH
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccc
Confidence 33556778999999999999999998765 56899999999999998 8888888853 579999876432
Q ss_pred HHHHHhhcccCCCceeEEEEeC--CccchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 84 VLDQLLKYSENEGSFDYAFVDA--DKDNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~--~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
.+... .++||+|++.. ...+....+..+.+.|+|||.+++.+.+.+.
T Consensus 316 ~~~~~------~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p~ 364 (433)
T 1u2z_A 316 RVAEL------IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRSL 364 (433)
T ss_dssp HHHHH------GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSCT
T ss_pred ccccc------cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCCc
Confidence 12111 26899999863 2355667788999999999999998876543
No 96
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.60 E-value=4.1e-14 Score=102.22 Aligned_cols=159 Identities=13% Similarity=0.048 Sum_probs=107.4
Q ss_pred HHHHHHHHHHH-HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 7 DAGQLMAMLLR-LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 7 ~~~~~l~~l~~-~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
....+...... ..++.+|||+|||+|..++.++...| ..+++++|+|+.+++.++++++..|...++++ .|.....
T Consensus 35 ~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~ 111 (200)
T 3fzg_A 35 TLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV 111 (200)
T ss_dssp GHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH
T ss_pred hHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC
Confidence 33444444333 36678999999999999999988776 67999999999999999999999998766776 4544332
Q ss_pred HHHhhcccCCCceeEEEEeCCccc---hHHHHHHHHhccCcCeEEEEeccc-cCccccCCCCCCCCCcccchHHHHHHHH
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDN---YCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLN 161 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~---~~~~~~~~~~~L~~gG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (188)
+ .++||+|+.--.-+. ....+..+.+.|+|||++|.-++- ..|. .. .....+ .+.|.
T Consensus 112 ~--------~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr----~~--gm~~~Y-----~~~~~ 172 (200)
T 3fzg_A 112 Y--------KGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGK----EK--GMEENY-----QLWFE 172 (200)
T ss_dssp T--------TSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC------CT--TCCCCH-----HHHHH
T ss_pred C--------CCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCC----Cc--chhhhH-----HHHHH
Confidence 1 478999987642222 223445788999999999876522 1121 10 111111 34444
Q ss_pred HHhhcCCCeEEEEeecCCceEEEEEcC
Q 029780 162 RSLADDPRVQLSHVALGDGITICRRIF 188 (188)
Q Consensus 162 ~~~~~~~~~~~~~lp~~~G~~~~~~~~ 188 (188)
+.+ .........+-+++-+....+++
T Consensus 173 ~~~-~~~~~~~~~~~~~nEl~y~~~~~ 198 (200)
T 3fzg_A 173 SFT-KGWIKILDSKVIGNELVYITSGF 198 (200)
T ss_dssp HHT-TTTSCEEEEEEETTEEEEEECCC
T ss_pred Hhc-cCcceeeeeeeeCceEEEEEecc
Confidence 444 44556667777888888777654
No 97
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=4.1e-15 Score=110.01 Aligned_cols=115 Identities=26% Similarity=0.307 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+.....+...+...++.+|||+|||+|..+..++....+..+++++|+++++++.+++++...++. +++++.+|.....
T Consensus 63 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 63 IHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCC
T ss_pred HHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCC
Confidence 444444544556677789999999999999999998743579999999999999999999888765 4999999985432
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+. .++||+|++.....+.. +.+.++|+|||.+++.-
T Consensus 142 ~~-------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 142 EP-------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp GG-------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred CC-------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEEE
Confidence 21 36899999986444332 57889999999999863
No 98
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.60 E-value=2.3e-15 Score=112.79 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=85.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|+.+..+|....++++|+++|+++++++.++++.++. +++..+.+|..+.... . .....
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~-~---~~~~~ 147 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKY-R---HLVEG 147 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGG-T---TTCCC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCcccc-c---cccce
Confidence 567889999999999999999998866899999999999999999887654 3688888887543111 1 12478
Q ss_pred eeEEEEeCC-ccchHHHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~-~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+|+||.|.. +.+...++.++.+.|||||.+++.
T Consensus 148 vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 148 VDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 999999864 344567889999999999999885
No 99
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.60 E-value=4.1e-15 Score=115.27 Aligned_cols=109 Identities=13% Similarity=0.199 Sum_probs=91.3
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..+++.. +.+++++|+++.+++.+++++...++.++++++++|..+. + + ..+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~ 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-P-C-----EDN 149 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-S-S-----CTT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-C-C-----CCC
Confidence 34567899999999999999999875 4699999999999999999999888888899999998653 1 1 247
Q ss_pred ceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 97 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 97 ~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+||+|++... ..+...+++++.++|||||.+++.+...
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 8999998742 3446789999999999999999987654
No 100
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.60 E-value=7.9e-15 Score=117.85 Aligned_cols=107 Identities=23% Similarity=0.336 Sum_probs=91.0
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..++.++.. ..+|+++|+++++++.|+++++.+++.+ ++++++|+.+.++.+... ..+||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~---~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKE---GERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHT---TCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhc---CCCee
Confidence 6779999999999999999987 4699999999999999999999998876 999999999887665322 46899
Q ss_pred EEEEeCCc------------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 100 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 100 ~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+|++|.+. ..+..++..+.++|+|||.+++....
T Consensus 282 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 282 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99999643 34567888899999999999986543
No 101
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.60 E-value=7.1e-15 Score=110.67 Aligned_cols=115 Identities=17% Similarity=0.227 Sum_probs=92.8
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
...+...+...++.+|||+|||+|..+..++... .+++++|+++++++.+++++...++. +++++++|+.+. + +
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~-~ 83 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL-P-F 83 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC-C-S
T ss_pred cchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC-C-C
Confidence 3344445567788899999999999999999874 49999999999999999999887765 699999998543 1 1
Q ss_pred hhcccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 89 LKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..++||+|++... ..+...+++++.++|+|||.+++.+...
T Consensus 84 -----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 84 -----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp -----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred -----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 2478999998742 3456789999999999999999976554
No 102
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=8e-15 Score=114.77 Aligned_cols=114 Identities=10% Similarity=0.133 Sum_probs=93.5
Q ss_pred HHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 10 QLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 10 ~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
+.+..++. ..++.+|||+|||+|..+..+++.. +.+++++|+++++++.+++++...++.++++++.+|..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-- 152 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF-- 152 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--
Confidence 34444443 3466799999999999999999875 4699999999999999999999888878899999998543
Q ss_pred HHhhcccCCCceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 87 QLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
.++||+|++... ..+...+++.+.++|+|||.+++.+....
T Consensus 153 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 153 --------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp --------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred --------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 368999998742 24668899999999999999999876653
No 103
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.60 E-value=9.2e-15 Score=112.74 Aligned_cols=114 Identities=9% Similarity=0.099 Sum_probs=92.7
Q ss_pred HHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 10 QLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 10 ~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
+.+..++. ..++.+|||||||+|..+..+++.. +.+++++|+++++++.+++++...++.++++++.+|..+.
T Consensus 51 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-- 126 (287)
T 1kpg_A 51 AKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF-- 126 (287)
T ss_dssp HHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC--
T ss_pred HHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC--
Confidence 34444443 3456799999999999999999655 4599999999999999999999888877899999998532
Q ss_pred HHhhcccCCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 87 QLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
.++||+|++.... .+...+++++.++|||||.+++.+....
T Consensus 127 --------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 127 --------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp --------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred --------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 2789999987421 4567899999999999999999876653
No 104
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.60 E-value=3.3e-15 Score=114.57 Aligned_cols=107 Identities=26% Similarity=0.345 Sum_probs=90.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+.. +++++.+|..+.. + ..++|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~-----~~~~f 106 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLP--F-----EDSSF 106 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCC--S-----CTTCE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCC--C-----CCCCe
Confidence 5678999999999999999999876 789999999999999999999888865 6999999987531 1 24789
Q ss_pred eEEEEeC---CccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 99 DYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 99 D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
|+|++.. +..+...+++.+.++|+|||++++.+...
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 9999875 33456789999999999999999976544
No 105
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.60 E-value=3.3e-15 Score=114.93 Aligned_cols=113 Identities=20% Similarity=0.280 Sum_probs=92.9
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
..+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++++++.|+++++..++.++++++.+|..+.+
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---- 177 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF---- 177 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC----
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc----
Confidence 3344444566778999999999999999999854478999999999999999999999887678999999987642
Q ss_pred hcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 90 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|+++. .....+++.+.++|+|||.+++...
T Consensus 178 ----~~~~~D~V~~~~--~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 178 ----DEKDVDALFLDV--PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ----SCCSEEEEEECC--SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ----cCCccCEEEECC--cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 136899999975 3445788999999999999998653
No 106
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.60 E-value=5.9e-15 Score=112.28 Aligned_cols=107 Identities=13% Similarity=0.242 Sum_probs=87.7
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..++... .+++++|+++++++.+++++...++. ++.+..+|+.+. + + ..+
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~-~-----~~~ 102 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P-F-----TDE 102 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C-S-----CTT
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C-C-----CCC
Confidence 44577899999999999999999874 49999999999999999999887765 699999998653 1 1 247
Q ss_pred ceeEEEEeC---CccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 97 SFDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 97 ~~D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+||+|++.. +..+...+++++.++|+|||.+++.+...
T Consensus 103 ~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 103 RFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 899999874 33456789999999999999999965543
No 107
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.59 E-value=1.9e-15 Score=117.86 Aligned_cols=109 Identities=15% Similarity=0.072 Sum_probs=89.0
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++....++.+++++|+++.+++.+++++...++.++++++++|+.+.. + .++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~~ 187 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD--T------REG 187 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC--C------CSC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC--c------cCC
Confidence 46778999999999999999973333478999999999999999999998888888999999987641 1 378
Q ss_pred eeEEEEeCCc------cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 98 FDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~~~------~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
||+|++.... .....+++.+.++|+|||.+++.+...
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 9999986522 222347899999999999999987553
No 108
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.59 E-value=3.4e-14 Score=117.05 Aligned_cols=120 Identities=14% Similarity=0.211 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHc--CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 8 AGQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 8 ~~~~l~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
...++..++... ++.+|||+|||+|..+..+|..++..++|+++|+++++++.+++++++.|+. ++.++++|+.+..
T Consensus 103 ~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~ 181 (479)
T 2frx_A 103 SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFG 181 (479)
T ss_dssp HHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHH
T ss_pred HHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhh
Confidence 344555556666 7889999999999999999998865689999999999999999999999876 5999999987653
Q ss_pred HHHhhcccCCCceeEEEEeCCcc---------c----------------hHHHHHHHHhccCcCeEEEEecccc
Q 029780 86 DQLLKYSENEGSFDYAFVDADKD---------N----------------YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~---------~----------------~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
... .++||.|++|.+.. + ...+++.+.++|||||.+++....+
T Consensus 182 ~~~------~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 182 AAV------PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHS------TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhc------cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 322 46899999985321 0 2357888889999999999876654
No 109
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=9.1e-15 Score=109.62 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=85.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+...+++++++|+.+.. ..++||
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~fD 134 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR--------PTELFD 134 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC--------CSSCEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC--------CCCCee
Confidence 4569999999999999999873 67999999999999999999877655567999999987632 136899
Q ss_pred EEEEeCC-----ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 100 YAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 100 ~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+|++... ......+++.+.++|+|||.+++.+...
T Consensus 135 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 135 LIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp EEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 9998642 2366789999999999999999865443
No 110
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=7.7e-16 Score=115.93 Aligned_cols=112 Identities=14% Similarity=0.148 Sum_probs=89.4
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
..++..+....++.+|||+|||+|..+..++.. +.+|+++|+++.+++.|++++...++.++++++++|+.+..+
T Consensus 67 ~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-- 141 (241)
T 3gdh_A 67 EHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-- 141 (241)
T ss_dssp HHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--
T ss_pred HHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--
Confidence 444445555558889999999999999999985 579999999999999999999999887789999999977642
Q ss_pred hhcccCCCceeEEEEeCCccc---hHHHHHHHHhccCcCeEEEEec
Q 029780 89 LKYSENEGSFDYAFVDADKDN---YCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~~---~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++||+|+++..... ....+..+.++|+|||.+++..
T Consensus 142 ------~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 ------FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ------GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ------cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 379999999854322 2224456678999999977653
No 111
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=2.2e-15 Score=117.76 Aligned_cols=109 Identities=13% Similarity=0.242 Sum_probs=90.7
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..+++.. +.+|+++|+++++++.|++++...++.++++++.+|+.+. + + ..++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-~-----~~~~ 185 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-P-F-----DKGA 185 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-C-C-----CTTC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-C-C-----CCCC
Confidence 4456799999999999999999874 5699999999999999999999999888899999998653 1 1 2479
Q ss_pred eeEEEEeCC--ccchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 98 FDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 98 ~D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
||+|++... +-+...+++.+.++|+|||.+++.+....
T Consensus 186 fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 186 VTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred EeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 999998642 22478899999999999999998765543
No 112
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.58 E-value=4.5e-15 Score=109.28 Aligned_cols=102 Identities=9% Similarity=0.003 Sum_probs=77.6
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC-----------CCCcEEEEEcchHHHHHH
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG-----------VDHKINFIESEALSVLDQ 87 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~-----------~~~~~~~~~~d~~~~~~~ 87 (188)
.++.+|||+|||+|..+.++++. +.+|+++|+++++++.|+++..... ...+++++++|+.+....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 46789999999999999999986 5699999999999999998754210 124689999998764221
Q ss_pred HhhcccCCCceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEE
Q 029780 88 LLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
- .++||+|+.... ......+++++.++|||||.+++
T Consensus 98 ~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 98 D------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp H------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred c------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 0 158999997532 12345688999999999998333
No 113
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.58 E-value=1.1e-14 Score=110.85 Aligned_cols=115 Identities=10% Similarity=0.037 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh----------c------CC
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK----------A------GV 70 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~----------~------~~ 70 (188)
...+++..+....++.+|||+|||+|..+.+||+. +.+|++||+++.+++.|++.... . ..
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 33444444333346789999999999999999985 66999999999999999876431 0 01
Q ss_pred CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeC-----CccchHHHHHHHHhccCcCeEEEEe
Q 029780 71 DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 71 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~-----~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..+++++++|+.+.... ..++||+|+... +......+++.+.++|||||.+++.
T Consensus 132 ~~~i~~~~~D~~~l~~~------~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 132 SGSISLYCCSIFDLPRA------NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TSSEEEEESCTTTGGGG------CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceEEEECccccCCcc------cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 24799999998764221 127899999653 2234567899999999999998644
No 114
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.58 E-value=7.7e-14 Score=119.69 Aligned_cols=157 Identities=10% Similarity=0.117 Sum_probs=109.7
Q ss_pred HHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc------CCCCcEEEEEcchHHHHH
Q 029780 13 AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA------GVDHKINFIESEALSVLD 86 (188)
Q Consensus 13 ~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------~~~~~~~~~~~d~~~~~~ 86 (188)
...+...++.+|||+|||+|..+..+++..++..+|+++|+++.+++.|++++... ++ .+++++++|+.+...
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~ 792 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDS 792 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCT
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCc
Confidence 33444557889999999999999999987643579999999999999999977643 33 479999999876321
Q ss_pred HHhhcccCCCceeEEEEeCCccc-----hHHHHHHHHhccCcCeEEEEecccc------Ccc----------ccCC---C
Q 029780 87 QLLKYSENEGSFDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTLW------GGT----------VAVP---E 142 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~~------~g~----------~~~~---~ 142 (188)
..++||+|++.....+ ...+++.+.++|+|| .+++..... .+. ...+ .
T Consensus 793 -------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fR 864 (950)
T 3htx_A 793 -------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFR 864 (950)
T ss_dssp -------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCS
T ss_pred -------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhccccccccccccccccccc
Confidence 2478999998753322 235789999999999 666654332 111 0000 0
Q ss_pred CCCCCCcccchHHHHHHHHHHhhcCCCeEEEEeecCCc
Q 029780 143 EQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDG 180 (188)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~G 180 (188)
.......+ ....++.+.+.+..+.+|.....++|+|
T Consensus 865 h~DHrFEW--TReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 865 NHDHKFEW--TREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CSSCSCCB--CHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred ccCcceee--cHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 01111122 3445666667788888999999999987
No 115
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.58 E-value=7.2e-15 Score=111.23 Aligned_cols=105 Identities=16% Similarity=0.219 Sum_probs=85.2
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--------CCCCcEEEEEcchHHHHHHHhhc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--------GVDHKINFIESEALSVLDQLLKY 91 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~ 91 (188)
++.+|||||||+|..+..++...+ +.+++++|+++.+++.+++++... ++. +++++.+|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhc--
Confidence 566899999999999999999876 789999999999999999998776 654 69999999976544322
Q ss_pred ccCCCceeEEEEeCCccc-----------hHHHHHHHHhccCcCeEEEEe
Q 029780 92 SENEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+.+++|.|++...... ...+++.+.++|+|||.+++.
T Consensus 125 --~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 125 --EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp --CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred --cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 2478999987642221 147899999999999999883
No 116
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.58 E-value=5.9e-15 Score=110.03 Aligned_cols=114 Identities=18% Similarity=0.253 Sum_probs=88.3
Q ss_pred HHHHHHHHH-HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC----CCcEEEEEcchH
Q 029780 8 AGQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV----DHKINFIESEAL 82 (188)
Q Consensus 8 ~~~~l~~l~-~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~ 82 (188)
...++..+. ...++.+|||+|||+|..+..+++...+..+|+++|+++.+++.+++++...+. .++++++.+|..
T Consensus 64 ~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 143 (226)
T 1i1n_A 64 HAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR 143 (226)
T ss_dssp HHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcc
Confidence 334444443 255678999999999999999998764357999999999999999999888664 357999999986
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+.... .++||+|+++..... +++.+.++|+|||.+++..
T Consensus 144 ~~~~~-------~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 144 MGYAE-------EAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp GCCGG-------GCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEE
T ss_pred cCccc-------CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 43211 368999999865433 3567889999999999863
No 117
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.58 E-value=3e-15 Score=112.09 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=85.5
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...+ +++++++|..+.. ..++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~--------~~~~ 109 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYD--------FEEK 109 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCC--------CCSC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccC--------CCCC
Confidence 34567999999999999999999886 7899999999999999999876544 7999999986541 1378
Q ss_pred eeEEEEeCCccc-----hHHHHHHHHhccCcCeEEEEecccc
Q 029780 98 FDYAFVDADKDN-----YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~~~~~-----~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
||+|++.....+ ...+++++.++|+|||.+++.+...
T Consensus 110 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 110 YDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999998853221 2358999999999999999977553
No 118
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.58 E-value=7e-15 Score=116.15 Aligned_cols=116 Identities=14% Similarity=0.195 Sum_probs=87.5
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC----------CCCcEEEEE
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG----------VDHKINFIE 78 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~----------~~~~~~~~~ 78 (188)
...+...+...++.+|||+|||+|..+..+++...+..+++++|+++++++.|++++...+ ..++++++.
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 3334444467788899999999999999999975436899999999999999999988632 235799999
Q ss_pred cchHHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 79 SEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 79 ~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+|+.+....+. .++||+|+++... ...+++.+.++|+|||.+++..
T Consensus 174 ~d~~~~~~~~~-----~~~fD~V~~~~~~--~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 174 KDISGATEDIK-----SLTFDAVALDMLN--PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp SCTTCCC------------EEEEEECSSS--TTTTHHHHGGGEEEEEEEEEEE
T ss_pred CChHHcccccC-----CCCeeEEEECCCC--HHHHHHHHHHhcCCCcEEEEEe
Confidence 99876432221 3579999997532 3347899999999999998743
No 119
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.58 E-value=2.8e-14 Score=111.35 Aligned_cols=107 Identities=15% Similarity=0.198 Sum_probs=85.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh---cCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
.++++|||||||+|..+..+++..+ ..+++++|+++.+++.+++++.. ....++++++.+|+.+..... ..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~-----~~ 167 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT-----PD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS-----CT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc-----cC
Confidence 5678999999999999999998644 67999999999999999998742 122367999999998765421 14
Q ss_pred CceeEEEEeCCccc-------hHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDN-------YCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~-------~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
++||+|++|..... ..++++.+.++|+|||++++..
T Consensus 168 ~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 168 NTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp TCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 78999999863221 1578999999999999999863
No 120
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.58 E-value=4.5e-14 Score=121.26 Aligned_cols=113 Identities=21% Similarity=0.356 Sum_probs=94.2
Q ss_pred HHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC-CcEEEEEcchHHHHHHHhhc
Q 029780 13 AMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALSVLDQLLKY 91 (188)
Q Consensus 13 ~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~ 91 (188)
..+....++++|||+|||+|..++.++..- ..+|+++|+++.+++.+++|++.+++. ++++++++|+.+.++..
T Consensus 532 ~~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~--- 606 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA--- 606 (703)
T ss_dssp HHHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC---
T ss_pred HHHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc---
Confidence 334456688999999999999999998742 357999999999999999999999987 68999999999877653
Q ss_pred ccCCCceeEEEEeCCc--------------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 92 SENEGSFDYAFVDADK--------------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~--------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++||+|++|.+. ..+..++..+.++|+|||.++++...
T Consensus 607 ---~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 607 ---NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ---CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ---CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4789999998642 23556788889999999999987655
No 121
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.58 E-value=4.3e-14 Score=113.32 Aligned_cols=116 Identities=12% Similarity=0.040 Sum_probs=89.5
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHH-------HhcCCC-CcEEEEEcchHHHHH
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-------KKAGVD-HKINFIESEALSVLD 86 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-------~~~~~~-~~~~~~~~d~~~~~~ 86 (188)
.+...++.+|||+|||+|..++.+|...+ ..++++||+++.+++.|+++. +..++. .+++++++|+.+.--
T Consensus 168 ~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 168 EIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEW 246 (438)
T ss_dssp HHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHH
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcc
Confidence 33566778999999999999999998764 457999999999999998764 344653 689999999876421
Q ss_pred HHhhcccCCCceeEEEEeCC--ccchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 87 QLLKYSENEGSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
. +. ...+|+||+... ..+....+.++.+.|||||.+|+.+.+.+.
T Consensus 247 ~--d~---~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 247 R--ER---IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp H--HH---HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred c--cc---cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 1 00 147999998642 345567778889999999999998877644
No 122
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.57 E-value=3.9e-15 Score=110.18 Aligned_cols=109 Identities=21% Similarity=0.228 Sum_probs=85.8
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
+++..+....++.+|||+|||+|..+..++.. ..+++++|+++++++.+++++...+ +++++++|+.+..
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~---- 110 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS---- 110 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC----
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC----
Confidence 34444444556679999999999999999986 4599999999999999999876543 7999999987642
Q ss_pred hcccCCCceeEEEEeCCc------cchHHHHHHHHhccCcCeEEEEecc
Q 029780 90 KYSENEGSFDYAFVDADK------DNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~------~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|++.... .....+++.+.++|+|||.+++...
T Consensus 111 ----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 111 ----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp ----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 14789999987422 2235679999999999999998653
No 123
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.57 E-value=2.6e-14 Score=115.03 Aligned_cols=103 Identities=18% Similarity=0.251 Sum_probs=85.1
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++++|||+|||+|..++.+|.. +.+|+++|+++.+++.+++|++.+++.. .+.++|+.+.++.+ .+.||
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~------~~~fD 282 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL------EGPFH 282 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC------CCCEE
T ss_pred CCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh------cCCCC
Confidence 3789999999999999999986 4569999999999999999999998864 45699998877654 24499
Q ss_pred EEEEeCCc------------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 100 YAFVDADK------------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 100 ~i~id~~~------------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+|++|.+. ..+..++..+.++|+|||.+++....
T Consensus 283 ~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 283 HVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99999653 24567888889999999999865443
No 124
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.57 E-value=5.5e-15 Score=111.10 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=87.5
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
..++..+....++.+|||||||+|..+..++... .+++++|+++++++.|++++.. +++++++|+.+..
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~--- 99 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ--- 99 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC---
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC---
Confidence 3445555556678899999999999999999863 4899999999999999987532 6999999987651
Q ss_pred hhcccCCCceeEEEEeCC---ccchHHHHHHHH-hccCcCeEEEEeccc
Q 029780 89 LKYSENEGSFDYAFVDAD---KDNYCNYHERLM-KLLKVGGIAVYDNTL 133 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~---~~~~~~~~~~~~-~~L~~gG~lv~~~~~ 133 (188)
..++||+|++... ..+...+++++. ++|+|||.+++....
T Consensus 100 -----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 100 -----LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp -----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 1478999998753 345678999999 999999999997644
No 125
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.57 E-value=5.6e-15 Score=118.39 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=86.1
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC--cEEEEEcchHHHHHHHhhcccCC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH--KINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
..++.+|||+|||+|..++.+++..| +.+|+++|+++.+++.+++++..+++.+ +++++.+|..+.+ ..
T Consensus 220 ~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--------~~ 290 (375)
T 4dcm_A 220 ENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--------EP 290 (375)
T ss_dssp CSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--------CT
T ss_pred ccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--------CC
Confidence 34457999999999999999999876 7899999999999999999999888653 5888999987632 14
Q ss_pred CceeEEEEeCCc--------cchHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
++||+|+++... .....+++.+.+.|+|||.+++.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 689999998532 12346789999999999998884
No 126
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.57 E-value=5.6e-15 Score=113.56 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=89.9
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..++.+|+.. ..+|+++|++|.+++.+++|++.+++.++++++++|+.++.. .+
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~--------~~ 191 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--------EN 191 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------CS
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc--------cc
Confidence 35578899999999999999999863 469999999999999999999999999999999999976532 47
Q ss_pred ceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 97 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.||.|+++..+. ..++++.+.++|++||+|.+++..
T Consensus 192 ~~D~Vi~~~p~~-~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 192 IADRILMGYVVR-THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CEEEEEECCCSS-GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCEEEECCCCc-HHHHHHHHHHHcCCCCEEEEEeee
Confidence 899999986543 356788899999999999876543
No 127
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.57 E-value=8.7e-15 Score=111.02 Aligned_cols=111 Identities=18% Similarity=0.163 Sum_probs=90.2
Q ss_pred HHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc-CCCCcEEEEEcchHHHHHHHh
Q 029780 11 LMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 11 ~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 89 (188)
.+...+...++.+|||+|||+|..+..+++.+.+..+++++|+++++++.++++++.. + .++++++.+|+.+. .+
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~--~~- 162 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEA--EL- 162 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGC--CC-
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhc--CC-
Confidence 3333445667789999999999999999998544789999999999999999999887 7 56799999998654 11
Q ss_pred hcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 90 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..++||+|+++. .+...+++.+.++|+|||.+++..
T Consensus 163 ----~~~~~D~v~~~~--~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 163 ----EEAAYDGVALDL--MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ----CTTCEEEEEEES--SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCCcCEEEECC--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 136899999975 344578899999999999999864
No 128
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=9.1e-14 Score=101.78 Aligned_cols=110 Identities=12% Similarity=-0.014 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
...++..+.... +.+|||+|||+|..+..++.. +.+++++|+++++++.++++. .+++++++|+.+. +
T Consensus 30 ~~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~- 97 (203)
T 3h2b_A 30 DRVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDL-S- 97 (203)
T ss_dssp THHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGG-G-
T ss_pred HHHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCccccc-c-
Confidence 344566555544 779999999999999999986 569999999999999999872 3689999998764 1
Q ss_pred HhhcccCCCceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+ ..++||+|++... ..+...+++.+.++|+|||.+++.....
T Consensus 98 ~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 98 D-----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp G-----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred c-----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 1 2479999998642 2366889999999999999999976543
No 129
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.57 E-value=1.7e-14 Score=106.85 Aligned_cols=104 Identities=16% Similarity=0.159 Sum_probs=79.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++...+ .++|+++|+++++++.+.+..+.. +++.++.+|+.+..... . ..++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~-~---~~~~f 127 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS-G---IVEKV 127 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT-T---TCCCE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc-c---cccce
Confidence 4667999999999999999999876 689999999999887766655543 36888888875421000 0 13689
Q ss_pred eEEEEeCCccc-hHHHHHHHHhccCcCeEEEEe
Q 029780 99 DYAFVDADKDN-YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 99 D~i~id~~~~~-~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|+|+++..... ...+++++.++|||||.+++.
T Consensus 128 D~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 128 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 99999864333 334589999999999999986
No 130
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.57 E-value=7.1e-15 Score=110.69 Aligned_cols=117 Identities=13% Similarity=0.177 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHc----CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 8 AGQLMAMLLRLV----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 8 ~~~~l~~l~~~~----~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
...++..++... ++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++...+ ..+++++.+|+.+
T Consensus 63 ~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~ 139 (241)
T 2ex4_A 63 SRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQD 139 (241)
T ss_dssp HHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhh
Confidence 445555554432 47899999999999999988764 4699999999999999999987654 3468899999765
Q ss_pred HHHHHhhcccCCCceeEEEEeCCcc-----chHHHHHHHHhccCcCeEEEEecccc
Q 029780 84 VLDQLLKYSENEGSFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
.. + ..++||+|++..... ....+++.+.++|+|||.+++.+...
T Consensus 140 ~~--~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 140 FT--P-----EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp CC--C-----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred cC--C-----CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 31 1 135899999985322 24478999999999999999966543
No 131
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.57 E-value=3.8e-14 Score=109.31 Aligned_cols=110 Identities=13% Similarity=0.187 Sum_probs=88.8
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
.++..+ ...++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++ +++++++|..+...
T Consensus 111 ~~~~~~-~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~--- 181 (286)
T 3m70_A 111 DVVDAA-KIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI--- 181 (286)
T ss_dssp HHHHHH-HHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC---
T ss_pred HHHHHh-hccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc---
Confidence 344433 4457889999999999999999986 56999999999999999999998876 69999999865311
Q ss_pred hcccCCCceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 90 KYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++||+|++... ......+++.+.++|+|||.+++....
T Consensus 182 -----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 182 -----QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp -----CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred -----cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 378999998752 344568999999999999997764443
No 132
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.56 E-value=1.3e-14 Score=109.05 Aligned_cols=113 Identities=20% Similarity=0.319 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+.....+...+...++.+|||+|||+|..+..+++..+ .+++++|+++++++.+++++...++.+ ++++.+|....+
T Consensus 77 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~ 153 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSKGF 153 (235)
T ss_dssp HHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCcccCC
Confidence 44445555555667778999999999999999998764 699999999999999999999888764 999999973222
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+. ..+||+|+++...... .+.+.+.|+|||.+++.-
T Consensus 154 ~~-------~~~fD~Ii~~~~~~~~---~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 154 PP-------KAPYDVIIVTAGAPKI---PEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp GG-------GCCEEEEEECSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred CC-------CCCccEEEECCcHHHH---HHHHHHhcCCCcEEEEEE
Confidence 11 2469999998654433 246789999999999864
No 133
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.56 E-value=1e-14 Score=108.85 Aligned_cols=106 Identities=17% Similarity=0.193 Sum_probs=83.5
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..+++.+.+.++++++|+++++++.++++.+.. ++++++.+|+.+... +.. ..++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~-~~~---~~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEE-YRA---LVPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGG-GTT---TCCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcch-hhc---ccCC
Confidence 346679999999999999999987644689999999999999999887654 479999999865311 000 1358
Q ss_pred eeEEEEeCCccchH-HHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDADKDNYC-NYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~~~~-~~~~~~~~~L~~gG~lv~~ 130 (188)
||+|+++....... .++..+.+.|+|||.+++.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999987544433 4489999999999999886
No 134
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.56 E-value=1.2e-14 Score=111.68 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc-C-CCCcEEEEEcchHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-G-VDHKINFIESEALSVL 85 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~-~~~~~~~~~~d~~~~~ 85 (188)
....+...+...++.+|||+|||+|..+..++..+.+..+++++|+++++++.|+++++.. + +.++++++++|+.+..
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3334444445667789999999999999999986544789999999999999999999887 4 4567999999986541
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+ ..++||+|+++.. +...+++.+.++|+|||.+++...
T Consensus 167 --~-----~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 --L-----PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp --C-----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred --C-----CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 1 1468999999753 445789999999999999998643
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.56 E-value=3.5e-15 Score=114.75 Aligned_cols=108 Identities=14% Similarity=0.258 Sum_probs=87.6
Q ss_pred HHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc-CCCCcEEEEEcchHHHHHHHhhcc
Q 029780 14 MLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-GVDHKINFIESEALSVLDQLLKYS 92 (188)
Q Consensus 14 ~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~ 92 (188)
..+...++.+|||+|||+|..+..+++.+.++.+++++|+++++++.++++++.. +. ++++++.+|+.+.+
T Consensus 104 ~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~------- 175 (275)
T 1yb2_A 104 MRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFI------- 175 (275)
T ss_dssp --CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCC-------
T ss_pred HHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccC-------
Confidence 3344567789999999999999999987433789999999999999999999887 74 46999999986521
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|+++. .+...+++.+.+.|+|||.+++...
T Consensus 176 -~~~~fD~Vi~~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 176 -SDQMYDAVIADI--PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp -CSCCEEEEEECC--SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred -cCCCccEEEEcC--cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 136899999964 3446789999999999999998653
No 136
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.56 E-value=2e-14 Score=115.32 Aligned_cols=114 Identities=14% Similarity=0.169 Sum_probs=93.2
Q ss_pred cHHHHHHHHHHHHHc-----CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc
Q 029780 5 APDAGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 79 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~-----~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 79 (188)
.+.+..++..+.... ++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++..+++. ++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEc
Confidence 466677777776543 5679999999999999999986 569999999999999999999988764 889999
Q ss_pred chHHHHHHHhhcccCCCceeEEEEeCC--------ccchHHHHHHHHhccCcCeEEEEe
Q 029780 80 EALSVLDQLLKYSENEGSFDYAFVDAD--------KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 80 d~~~~~~~~~~~~~~~~~~D~i~id~~--------~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|+.+.... .++||+|+++.. ......+++.+.++|+|||.+++.
T Consensus 288 D~~~~~~~-------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 288 DVDEALTE-------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp STTTTSCT-------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcccc-------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 98764221 378999999842 234567899999999999999885
No 137
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=2.8e-14 Score=113.54 Aligned_cols=118 Identities=16% Similarity=0.165 Sum_probs=95.1
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+..+..|..++...++.+|||+|||+|..++.++....+..+++++|+++++++.|++|++..++. ++++.++|+.+.
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~ 266 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHL 266 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhC
Confidence 3455555555666667789999999999999999997622689999999999999999999999987 899999999775
Q ss_pred HHHHhhcccCCCceeEEEEeCCcc-----------chHHHHHHHHhccCcCeEEEEe
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
... ...||+|++|.+.. .+..+++.+.++|+|||.+++.
T Consensus 267 ~~~-------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 267 PRF-------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGT-------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ccc-------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 322 35689999985321 1367888889999999998884
No 138
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.56 E-value=4.6e-14 Score=102.76 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=87.2
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. +++++.+|..+.. +
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~------ 94 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLT--F------ 94 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCC--C------
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCC--C------
Confidence 344557789999999999999999986 569999999999999999999887764 5999999986531 1
Q ss_pred CCceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 95 EGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 95 ~~~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++||+|++... ......+++.+.++|+|||.+++.+..
T Consensus 95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 378999998742 235678899999999999997775444
No 139
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.55 E-value=5.9e-14 Score=108.45 Aligned_cols=119 Identities=14% Similarity=0.170 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC---CcEEEEEcchHH
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD---HKINFIESEALS 83 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~---~~~~~~~~d~~~ 83 (188)
...+++..++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.|+++....+.. .++.+..+|..+
T Consensus 44 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 44 EYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 34455666666678889999999999999999986 559999999999999999887543322 357888999876
Q ss_pred HHHHHhhcccCCCceeEEEEeC----Cccc-------hHHHHHHHHhccCcCeEEEEecc
Q 029780 84 VLDQLLKYSENEGSFDYAFVDA----DKDN-------YCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~----~~~~-------~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
....+. ..++||+|++.+ +..+ ...+++++.++|+|||++++...
T Consensus 121 ~~~~~~----~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 121 LDKDVP----AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HHHHSC----CTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Cccccc----cCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 543321 247999999862 2223 67899999999999999998643
No 140
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.55 E-value=2.1e-14 Score=108.33 Aligned_cols=114 Identities=24% Similarity=0.327 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+.....+...+...++.+|||+|||+|..+..+++. ..+++++|+++++++.|+++++..++.++++++.+|..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 333344444555667889999999999999999987 57999999999999999999998888778999999986532
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
. ..++||+|+++.. +...+++.+.++|+|||.+++..
T Consensus 154 ~-------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 154 V-------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp C-------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred c-------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 0 1368999999643 44577899999999999999864
No 141
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.54 E-value=1.2e-14 Score=108.87 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=82.5
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++...+ .++|+++|+++++++.++++.... +++.++.+|+.+....+ . ..++
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~-~---~~~~ 143 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYA-N---IVEK 143 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGT-T---TSCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccccc-c---cCcc
Confidence 34567999999999999999999876 689999999999999999886544 57999999986521101 0 1268
Q ss_pred eeEEEEeCC-ccchHHHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDAD-KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~-~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
||+|+.+.. ......+++++.+.|+|||.+++.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999997643 223366799999999999999985
No 142
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.54 E-value=4.3e-14 Score=103.46 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=87.0
Q ss_pred HHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhc
Q 029780 12 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY 91 (188)
Q Consensus 12 l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (188)
+..++...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++++|..+. .+
T Consensus 21 l~~~~~~~~~~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~--~~--- 90 (202)
T 2kw5_A 21 LVSVANQIPQGKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADF--DI--- 90 (202)
T ss_dssp HHHHHHHSCSSEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTB--SC---
T ss_pred HHHHHHhCCCCCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhc--CC---
Confidence 334444333349999999999999999885 56999999999999999999887764 689999998653 11
Q ss_pred ccCCCceeEEEEeCCc---cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 92 SENEGSFDYAFVDADK---DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~---~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..++||+|++...+ .....+++.+.++|+|||.+++.....
T Consensus 91 --~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 91 --VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 24689999986422 345778999999999999999976554
No 143
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.54 E-value=6.3e-15 Score=110.13 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=86.5
Q ss_pred HHHHHHHHH-HHcCCCEEEEEcccchHHHHHHHhhCCC-----CCEEEEEeCCchhHHHHHHHHHhcCC----CCcEEEE
Q 029780 8 AGQLMAMLL-RLVNAKKTIEIGVFTGYSLLLTALTIPE-----DGQITAIDVNRETYEIGLPIIKKAGV----DHKINFI 77 (188)
Q Consensus 8 ~~~~l~~l~-~~~~~~~vLeiG~g~G~~~~~la~~~~~-----~~~v~~iD~~~~~~~~a~~~~~~~~~----~~~~~~~ 77 (188)
...++..+. ...++.+|||+|||+|+.+..+++..+. .++|+++|+++++++.+++++...+. .++++++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 344555444 3556679999999999999999986531 25999999999999999999887651 2469999
Q ss_pred EcchHHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 78 ESEALSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 78 ~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.+|..+.++. .++||+|+++...... .+.+.++|+|||.+++.
T Consensus 151 ~~d~~~~~~~-------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 151 EGDGRKGYPP-------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp ESCGGGCCGG-------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred ECCcccCCCc-------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 9998762221 2689999998754443 46788999999999986
No 144
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.54 E-value=2.8e-14 Score=106.61 Aligned_cols=110 Identities=23% Similarity=0.322 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+.....+...+...++.+|||+|||+|..+..++... .+++++|+++++++.+++++...+ +++++.+|..+..
T Consensus 56 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 56 LNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccccc
Confidence 3444444444556677899999999999999999874 699999999999999999987665 6999999987632
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+. .++||+|+++....+. .+.+.++|+|||.+++..
T Consensus 130 ~~-------~~~fD~v~~~~~~~~~---~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 130 EE-------EKPYDRVVVWATAPTL---LCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp GG-------GCCEEEEEESSBBSSC---CHHHHHTEEEEEEEEEEE
T ss_pred cc-------CCCccEEEECCcHHHH---HHHHHHHcCCCcEEEEEE
Confidence 21 3789999998644433 246889999999999864
No 145
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.54 E-value=5.7e-14 Score=107.51 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=86.1
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCch------hHHHHHHHHHhcCCCCcEEEEEcc-hHHHHHHHhh
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRE------TYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLK 90 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~------~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~ 90 (188)
..++.+|||||||+|..+..++....+..+++++|++++ +++.+++++...++.++++++.+| .......+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-- 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI-- 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC--
Confidence 456789999999999999999998633689999999997 999999999988877789999998 21110011
Q ss_pred cccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 91 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..++||+|++... ..+...+++.+..++++||.+++.+...
T Consensus 119 ---~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 119 ---ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp ---TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred ---CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 2478999998753 2334556667777788899999977654
No 146
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.54 E-value=5.9e-15 Score=112.19 Aligned_cols=105 Identities=18% Similarity=0.239 Sum_probs=86.0
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++... +.+++++|+++.+++.+++++... ++++++++|..+. .+ ..++
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~--~~-----~~~~ 120 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK--EF-----PENN 120 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC--CC-----CTTC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC--CC-----CCCc
Confidence 4466799999999999999999875 569999999999999999876543 5799999998653 11 2478
Q ss_pred eeEEEEeCC---c--cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 98 FDYAFVDAD---K--DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~~---~--~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
||+|++... . .+...+++.+.++|+|||.+++.+...
T Consensus 121 fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 121 FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 999998742 2 556788999999999999999987654
No 147
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.54 E-value=9.4e-14 Score=104.14 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=79.0
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..+|....+.++|+++|+++.+++...+..+.. .++.++.+|+...... . ...++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~-~---~~~~~ 146 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSY-K---SVVEN 146 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGT-T---TTCCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhh-h---ccccc
Confidence 557789999999999999999987765789999999999876555444332 3699999998642110 0 01368
Q ss_pred eeEEEEeCCccchHHHH-HHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDADKDNYCNYH-ERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~-~~~~~~L~~gG~lv~~ 130 (188)
||+||+|.........+ ..+.+.|||||.+++.
T Consensus 147 ~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 147 VDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99999997665555544 4555599999999986
No 148
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.53 E-value=6.9e-14 Score=105.73 Aligned_cols=110 Identities=16% Similarity=0.314 Sum_probs=86.4
Q ss_pred HHHHHHHHHH---cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 9 GQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 9 ~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
..++..++.. .++.+|||+|||+|..+..+++. +.+++++|+++++++.+++++...+. +++++++|..+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIA 101 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcc
Confidence 3444544443 34579999999999999999985 56999999999999999999887764 5899999987531
Q ss_pred HHHhhcccCCCceeEEEEeCC------ccchHHHHHHHHhccCcCeEEEEec
Q 029780 86 DQLLKYSENEGSFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+ .++||+|++... ......+++.+.++|+|||.++++-
T Consensus 102 --~------~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 --F------KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --C------CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --c------CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1 368999997531 1345678899999999999999863
No 149
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.53 E-value=5.3e-14 Score=112.26 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=90.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||||||+|..+..+++..| +.+++++|+ |++++.|++++...++.++++++.+|..+.-..+ .++|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------p~~~ 249 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF------PTGF 249 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC------CCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC------CCCc
Confidence 4678999999999999999999987 789999999 9999999999988888788999999986420001 2589
Q ss_pred eEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 99 DYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 99 D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
|+|++... ......+++++.+.|+|||.+++.+..++.
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 250 DAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred CEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 99998642 223357889999999999999998876643
No 150
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.53 E-value=9e-15 Score=111.51 Aligned_cols=105 Identities=15% Similarity=0.150 Sum_probs=81.7
Q ss_pred HHHHHHHHHcC-CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 10 QLMAMLLRLVN-AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 10 ~~l~~l~~~~~-~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
+++..+....+ ..+|||||||+|..+..++.. ..+|+++|+++.+++.|++ .++++++++++.+. .+
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~--~~ 95 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDT--GL 95 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCC--CC
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhh--cc
Confidence 45555555443 458999999999999999986 4699999999999887653 24699999998653 11
Q ss_pred hhcccCCCceeEEEEeC--CccchHHHHHHHHhccCcCeEEEEec
Q 029780 89 LKYSENEGSFDYAFVDA--DKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~--~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..++||+|++.. +.-+...++.++.++|||||.+++-.
T Consensus 96 -----~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 96 -----PPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp -----CSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----cCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 257999999874 33456789999999999999988754
No 151
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=2.2e-14 Score=115.28 Aligned_cols=116 Identities=14% Similarity=0.258 Sum_probs=90.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc-----C-CC-CcEEEEEcchHHHHHHHhh
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA-----G-VD-HKINFIESEALSVLDQLLK 90 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----~-~~-~~~~~~~~d~~~~~~~~~~ 90 (188)
..++.+|||+|||+|..+..++....++.+|+++|+++.+++.++++++.. | +. ++++++++|+.+... ...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~-~~~ 159 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLAT-AEP 159 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGG-CBS
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhh-ccc
Confidence 457789999999999999999998744789999999999999999988754 3 22 579999999865311 000
Q ss_pred cccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 91 YSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
.....++||+|++... ..+...+++++.++|||||++++.+...
T Consensus 160 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 0012478999998853 3456789999999999999999987654
No 152
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.53 E-value=1.9e-13 Score=109.50 Aligned_cols=105 Identities=17% Similarity=0.202 Sum_probs=89.5
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc---------------CCCCcEEEEEcchH
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA---------------GVDHKINFIESEAL 82 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------------~~~~~~~~~~~d~~ 82 (188)
..++.+|||+|||+|..++.++...+ ..+|+++|+++++++.+++|++.+ ++.+ ++++++|+.
T Consensus 45 ~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~ 122 (378)
T 2dul_A 45 ILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDAN 122 (378)
T ss_dssp HHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHH
T ss_pred HcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHH
Confidence 34788999999999999999999875 578999999999999999999988 7654 999999998
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+.+... ...||+|++|.. ....++++.+.+.|++||++++..
T Consensus 123 ~~~~~~------~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAER------HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHS------TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhc------cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 876543 358999999863 344688999999999999888754
No 153
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.52 E-value=6.3e-14 Score=105.22 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=86.7
Q ss_pred HHHHHHHHHHc--CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 9 GQLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 9 ~~~l~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
.+.+..++... ++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...+. +++++++|..+..
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~- 97 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLN- 97 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCC-
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCC-
Confidence 34444444433 6789999999999999999886 56999999999999999999887664 6899999986531
Q ss_pred HHhhcccCCCceeEEEEeC-C---c---cchHHHHHHHHhccCcCeEEEEe
Q 029780 87 QLLKYSENEGSFDYAFVDA-D---K---DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~-~---~---~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+ .++||+|++.. . . .....+++.+.++|+|||.++++
T Consensus 98 -~------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 98 -I------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -C------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -c------cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 36899999875 2 1 45577899999999999999984
No 154
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.52 E-value=3.5e-14 Score=104.32 Aligned_cols=118 Identities=11% Similarity=0.171 Sum_probs=90.6
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.....+++..+....++.+|||+|||+|..+..++.. .+.+++++|+++++++.+++++...+ .+++++++|+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~ 83 (209)
T 2p8j_A 8 QPQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKL 83 (209)
T ss_dssp CTHHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSC
T ss_pred hhhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhC
Confidence 3445667777777777889999999999975444433 26799999999999999999987765 3588899998653
Q ss_pred HHHHhhcccCCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+ + ..++||+|++.... .+...+++.+.++|+|||.+++....
T Consensus 84 -~-~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 84 -P-F-----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp -C-S-----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -C-C-----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 1 24689999986421 45678899999999999999997654
No 155
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.52 E-value=1.4e-13 Score=110.50 Aligned_cols=106 Identities=19% Similarity=0.116 Sum_probs=90.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCc-EEEEEcchHHHHH-HHhhcccCCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHK-INFIESEALSVLD-QLLKYSENEG 96 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~-~~~~~~d~~~~~~-~~~~~~~~~~ 96 (188)
.++.+|||++||+|..++.+|+..+...+|+++|+++++++.+++|++.+++.++ ++++++|+.+.+. .+ .+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~------~~ 124 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW------GF 124 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC------SS
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh------CC
Confidence 3567999999999999999998754126899999999999999999999998877 9999999988776 53 36
Q ss_pred ceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 97 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.||+|++|. .....++++.+.++|++||++++..
T Consensus 125 ~fD~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 125 GFDYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CEEEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 799999997 3334678999999999999888854
No 156
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.52 E-value=5.4e-14 Score=105.41 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=82.0
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcccCC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYSENE 95 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~ 95 (188)
..++.+|||+|||+|..+..+++...+.++++++|+++.+++.+.++.+.. .+++++.+|+.+. ++.. .
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~------~ 145 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML------I 145 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG------C
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc------C
Confidence 345679999999999999999998643679999999999888887776654 4699999998653 1211 4
Q ss_pred CceeEEEEeCCccc-hHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADKDN-YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~~~-~~~~~~~~~~~L~~gG~lv~~ 130 (188)
++||+|+++..... ...++.++.+.|+|||.+++.
T Consensus 146 ~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 146 AMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 68999999865322 245678899999999999984
No 157
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.52 E-value=4e-14 Score=113.51 Aligned_cols=106 Identities=14% Similarity=0.199 Sum_probs=87.8
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++++|||+|||+|..+..+++.. ..+|+++|++ ++++.|+++++..++.++++++++|+.+.. + .+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~------~~ 128 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS--L------PE 128 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC--C------SS
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC--c------CC
Confidence 34577899999999999999999862 3599999999 999999999999999888999999997641 1 37
Q ss_pred ceeEEEEeC--C----ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 97 SFDYAFVDA--D----KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 97 ~~D~i~id~--~----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+||+|+++. . ......++..+.++|+|||++++....
T Consensus 129 ~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 129 KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 899999864 1 133567888889999999999886554
No 158
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.52 E-value=1.2e-13 Score=109.21 Aligned_cols=102 Identities=19% Similarity=0.145 Sum_probs=87.1
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..++. ++ . ..+|+++|+++.+++.+++|++.+++.++++++++|+.+.+ ++
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------~~ 258 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------VK 258 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC----------CC
T ss_pred cCCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc----------CC
Confidence 35778999999999999999 87 2 67999999999999999999999998778999999997642 57
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
||+|++|.+. ....+++.+.++|++||.+++.+...
T Consensus 259 fD~Vi~dpP~-~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 259 GNRVIMNLPK-FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EEEEEECCTT-TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CcEEEECCcH-hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 9999998643 33478899999999999998876553
No 159
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.52 E-value=6.6e-14 Score=111.20 Aligned_cols=105 Identities=18% Similarity=0.242 Sum_probs=87.4
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++++|||+|||+|..+..+++. + ..+|+++|++ ++++.|+++++..++.++++++++|+.+. .+ ..+
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-----~~~ 132 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV--EL-----PVE 132 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC--CC-----SSS
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc--cC-----CCC
Confidence 4668889999999999999999986 3 5699999999 59999999999999988899999998765 11 247
Q ss_pred ceeEEEEeC------CccchHHHHHHHHhccCcCeEEEEec
Q 029780 97 SFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 97 ~~D~i~id~------~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+||+|+++. .......++..+.++|+|||.++.+.
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 899999863 23456778888899999999998543
No 160
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.52 E-value=3.6e-14 Score=106.72 Aligned_cols=99 Identities=15% Similarity=0.192 Sum_probs=80.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||||||+|..+..++.. +.+++++|+++++++.++++ ++++.+|..+.+..+ ..++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~-----~~~~ 101 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL-----PDKY 101 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS-----CTTC
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc-----CCCC
Confidence 346689999999999999999886 56899999999999988864 678899988765443 2478
Q ss_pred eeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 98 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 98 ~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
||+|++... ......+++++.++|||||.+++....
T Consensus 102 fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 102 LDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp BSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred eeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 999998742 224578999999999999999997554
No 161
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.52 E-value=1.6e-13 Score=108.50 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=85.4
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC---CC----CcEEEEEcchHHHHHHHhhcc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---VD----HKINFIESEALSVLDQLLKYS 92 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~~----~~~~~~~~d~~~~~~~~~~~~ 92 (188)
++++||+||||+|..+..+++.. ..+|++||+++.+++.|++++...+ +. ++++++.+|+.+++....+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 57899999999999999998864 3799999999999999999976432 22 27999999999988764211
Q ss_pred cCCCceeEEEEeCCc-c--------chHHHHHHH----HhccCcCeEEEEeccc
Q 029780 93 ENEGSFDYAFVDADK-D--------NYCNYHERL----MKLLKVGGIAVYDNTL 133 (188)
Q Consensus 93 ~~~~~~D~i~id~~~-~--------~~~~~~~~~----~~~L~~gG~lv~~~~~ 133 (188)
.++||+||+|... + ...++++.+ .++|+|||++++....
T Consensus 265 --~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 265 --GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp --TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred --CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 4789999999642 1 224666776 8999999999987433
No 162
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.52 E-value=4.7e-14 Score=104.15 Aligned_cols=110 Identities=15% Similarity=0.156 Sum_probs=87.3
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
..++..+....++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++ .+. .+++++++|..+. +
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~---~ 103 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW---T 103 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC---C
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC---C
Confidence 345555555667789999999999999999987 5699999999999999987 333 4699999998654 1
Q ss_pred hhcccCCCceeEEEEeCCcc---c--hHHHHHHHHhccCcCeEEEEecccc
Q 029780 89 LKYSENEGSFDYAFVDADKD---N--YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~---~--~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
..++||+|++..... + ...+++.+.++|+|||.+++.+...
T Consensus 104 -----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 -----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp -----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 257999999875322 2 3678999999999999999976543
No 163
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=8.7e-14 Score=103.40 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=83.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++...+ +++++|+++++++.+++++...+ .+++++++|..+.. + ..++|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~-----~~~~~ 104 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--F-----EDKTF 104 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--S-----CTTCE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--C-----CCCcE
Confidence 3467999999999999999998743 99999999999999999988766 57899999986531 1 14689
Q ss_pred eEEEEeCC--c---cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 99 DYAFVDAD--K---DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~--~---~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
|+|++... . .+...+++.+.++|+|||.+++.+..
T Consensus 105 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 105 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 99998754 2 24567889999999999999887554
No 164
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.51 E-value=1.6e-13 Score=101.74 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=82.7
Q ss_pred HHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 16 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
+...++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++ .++.+..++..+...... ...
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~---~~~ 114 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKV---PVG 114 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCS---CCC
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccc---ccC
Confidence 34456789999999999999999986 56999999999999999886 356788888866522111 123
Q ss_pred CceeEEEEeCC--ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 96 GSFDYAFVDAD--KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 96 ~~~D~i~id~~--~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.+||+|++... ..+...+++.+.++|+|||.+++.+..
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 115 KDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp CCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 56999998742 556778999999999999999997653
No 165
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.51 E-value=2.6e-14 Score=109.29 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=79.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CC-CCcEEEEEcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GV-DHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
.++++|||||||+|..+..+++. + .+++++|+++++++.|++++... ++ .++++++.+|+.+.+
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----------
Confidence 46689999999999999999887 4 79999999999999999876431 12 357999999986542
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
++||+|++|... ...+++.+.++|+|||++++.
T Consensus 138 ~~fD~Ii~d~~d--p~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 KKYDLIFCLQEP--DIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp CCEEEEEESSCC--CHHHHHHHHTTEEEEEEEEEE
T ss_pred hhCCEEEECCCC--hHHHHHHHHHhcCCCcEEEEE
Confidence 579999999633 345899999999999999985
No 166
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.51 E-value=9.7e-14 Score=109.88 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=84.4
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|+.+. .+ ..+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~-----~~~ 130 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV--HL-----PVE 130 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS--CC-----SCS
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh--cC-----CCC
Confidence 3567789999999999999999986 2 46999999996 9999999999999878899999998754 11 136
Q ss_pred ceeEEEEeC------CccchHHHHHHHHhccCcCeEEEE
Q 029780 97 SFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 97 ~~D~i~id~------~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
+||+|++.. .......++..+.++|+|||.++.
T Consensus 131 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 131 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred cEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 899999864 123456688888999999999984
No 167
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.51 E-value=7e-13 Score=104.29 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=88.6
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..+++..+ +.+++++|++ ++++.+++++...++.++++++.+|..+. .+ ...|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~------~~~~ 233 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY------GNDY 233 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC------CSCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC------CCCC
Confidence 5667999999999999999999886 7899999999 99999999999888877899999998653 11 2459
Q ss_pred eEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 99 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 99 D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
|+|++.... .....+++++.+.|+|||.+++.+...
T Consensus 234 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 234 DLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 999986422 334688999999999999888877665
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.50 E-value=1.7e-14 Score=109.35 Aligned_cols=120 Identities=13% Similarity=0.117 Sum_probs=86.5
Q ss_pred HHHHHHHHHc---CCCEEEEEcccchHHHHHHHhh--CCCCCEEEEEeCCchhHHHHHHHHHhc---CCCCc--------
Q 029780 10 QLMAMLLRLV---NAKKTIEIGVFTGYSLLLTALT--IPEDGQITAIDVNRETYEIGLPIIKKA---GVDHK-------- 73 (188)
Q Consensus 10 ~~l~~l~~~~---~~~~vLeiG~g~G~~~~~la~~--~~~~~~v~~iD~~~~~~~~a~~~~~~~---~~~~~-------- 73 (188)
+++..++... ++.+|||+|||+|..+..++.. .+ +.+|+++|+++++++.|++++... ++.++
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQS 116 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhh
Confidence 4555555442 4569999999999999999987 33 579999999999999999988765 43222
Q ss_pred -----------------EE-------------EEEcchHHHHHHHhhcccCCCceeEEEEeCCc------------cchH
Q 029780 74 -----------------IN-------------FIESEALSVLDQLLKYSENEGSFDYAFVDADK------------DNYC 111 (188)
Q Consensus 74 -----------------~~-------------~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~------------~~~~ 111 (188)
++ ++++|..+..+..... ...+||+|+++... ..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVL--AGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH--TTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeeccccccccccccc--CCCCceEEEeCCCeeccccccccccccHHH
Confidence 55 8899886632110000 13489999997421 2345
Q ss_pred HHHHHHHhccCcCeEEEEecc
Q 029780 112 NYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 112 ~~~~~~~~~L~~gG~lv~~~~ 132 (188)
.+++.+.++|+|||++++.+.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEeCc
Confidence 788999999999999998433
No 169
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.50 E-value=1.5e-13 Score=106.05 Aligned_cols=106 Identities=12% Similarity=0.124 Sum_probs=86.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++.. + ..+++++|+++++++.|++++...+...+++++++|+.+. .+. ..++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~----~~~~f 134 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR--HMD----LGKEF 134 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS--CCC----CSSCE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc--ccC----CCCCc
Confidence 57789999999999998888875 2 4699999999999999999998887767899999998653 110 14689
Q ss_pred eEEEEeCCc-------cchHHHHHHHHhccCcCeEEEEecc
Q 029780 99 DYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 99 D~i~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|+|++.... .+...+++.+.++|+|||.+++...
T Consensus 135 D~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 135 DVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999987532 3456789999999999999998653
No 170
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.50 E-value=2.2e-13 Score=107.28 Aligned_cols=106 Identities=17% Similarity=0.189 Sum_probs=86.1
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
.....++++|||+|||+|..+..+++. + ..+|+++|++ ++++.|+++++..++.++++++.+|+.+.. + .
T Consensus 33 ~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~ 102 (328)
T 1g6q_1 33 NKDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L-----P 102 (328)
T ss_dssp HHHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C-----S
T ss_pred hHhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C-----C
Confidence 345678889999999999999999885 2 4699999999 699999999999998888999999986541 1 1
Q ss_pred CCceeEEEEeC------CccchHHHHHHHHhccCcCeEEEEe
Q 029780 95 EGSFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 95 ~~~~D~i~id~------~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.++||+|+++. .......++..+.++|+|||.++.+
T Consensus 103 ~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 36899999873 2234567888888999999999843
No 171
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.50 E-value=1.6e-13 Score=108.87 Aligned_cols=108 Identities=16% Similarity=0.127 Sum_probs=90.1
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 100 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 100 (188)
+.+|||||||+|..+..+++.+| +.+++++|+ +++++.+++++...++.++++++.+|..+..+.. .++||+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~~D~ 251 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------GGAADV 251 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT------TCCEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC------CCCccE
Confidence 78999999999999999999987 789999999 8999999999998888888999999986542111 357999
Q ss_pred EEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 101 AFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 101 i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
|++.... .....+++++.+.|+|||.+++.+...+.
T Consensus 252 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (352)
T 3mcz_A 252 VMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMND 292 (352)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCT
T ss_pred EEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9986422 23467899999999999999998876543
No 172
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.50 E-value=4.7e-14 Score=104.50 Aligned_cols=109 Identities=19% Similarity=0.192 Sum_probs=85.4
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
..++..+ ...++.+|||+|||+|..+..++.. +.+++++|+++++++.+++++. .+++++.+|+.+.. .
T Consensus 35 ~~~l~~~-~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~--~ 103 (220)
T 3hnr_A 35 EDILEDV-VNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFE--V 103 (220)
T ss_dssp HHHHHHH-HHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCC--C
T ss_pred HHHHHHh-hccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcC--C
Confidence 3455544 3447789999999999999999986 5799999999999999998764 46889999986531 1
Q ss_pred hhcccCCCceeEEEEeCCc---cchH--HHHHHHHhccCcCeEEEEecccc
Q 029780 89 LKYSENEGSFDYAFVDADK---DNYC--NYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~---~~~~--~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
.++||+|++.... .+.. .+++.+.++|+|||.+++.+..+
T Consensus 104 ------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 104 ------PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp ------CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred ------CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 2789999998532 2222 38899999999999999987554
No 173
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.50 E-value=4e-14 Score=107.16 Aligned_cols=98 Identities=10% Similarity=0.208 Sum_probs=81.3
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..+++..+ .+++++|+++++++.+++++. ..+++++.+|+.+. + + ..++||
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~-~-~-----~~~~fD 110 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDI-A-I-----EPDAYN 110 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGC-C-C-----CTTCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhC-C-C-----CCCCeE
Confidence 567999999999999999998732 399999999999999998764 35799999998653 1 1 247899
Q ss_pred EEEEeCC---ccchHHHHHHHHhccCcCeEEEEe
Q 029780 100 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 100 ~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+|++... ..+...+++.+.++|+|||.+++.
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 9998753 345688999999999999999986
No 174
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.50 E-value=1.9e-14 Score=109.23 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHc-----CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc
Q 029780 6 PDAGQLMAMLLRLV-----NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 80 (188)
Q Consensus 6 ~~~~~~l~~l~~~~-----~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 80 (188)
+++..++..++... ++.+|||+|||+|..+..++...+ +.+++++|+++++++.|++++...++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 56667777766533 456999999999999999988765 679999999999999999999999888789999999
Q ss_pred hHH-HHHHHhhcccCCCceeEEEEeC
Q 029780 81 ALS-VLDQLLKYSENEGSFDYAFVDA 105 (188)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~D~i~id~ 105 (188)
+.+ ....+... ..++||+|+++.
T Consensus 125 ~~~~~~~~~~~~--~~~~fD~i~~np 148 (254)
T 2h00_A 125 QKTLLMDALKEE--SEIIYDFCMCNP 148 (254)
T ss_dssp TTCSSTTTSTTC--CSCCBSEEEECC
T ss_pred hhhhhhhhhhcc--cCCcccEEEECC
Confidence 754 22222100 015899999984
No 175
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=8.8e-14 Score=105.92 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=82.7
Q ss_pred HHHHHHHHHc-CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 10 QLMAMLLRLV-NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 10 ~~l~~l~~~~-~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
.++..+.... ++.+|||+|||+|..+..++.. +.+++++|+++++++.|++++. +++++++|..+..
T Consensus 39 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~--- 106 (263)
T 3pfg_A 39 DLAALVRRHSPKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFS--- 106 (263)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCC---
T ss_pred HHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCC---
Confidence 3344444433 4579999999999999999886 4599999999999999998742 6899999986531
Q ss_pred hhcccCCCceeEEEEeC-Cc------cchHHHHHHHHhccCcCeEEEEecc
Q 029780 89 LKYSENEGSFDYAFVDA-DK------DNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~-~~------~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|++.. .. .....+++.+.++|+|||.++++..
T Consensus 107 -----~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 107 -----LGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp -----CSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred -----ccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 137899999875 21 2445789999999999999999754
No 176
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.49 E-value=2.9e-13 Score=96.39 Aligned_cols=100 Identities=12% Similarity=0.071 Sum_probs=81.7
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..+++.. .+++++|+++++++.++++ .+++++..+| . .+ ..+
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~----~~-----~~~ 74 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-K----EI-----PDN 74 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-G----GS-----CTT
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-C----CC-----CCC
Confidence 45677799999999999999999864 4999999999999999987 2468999988 1 11 247
Q ss_pred ceeEEEEeC---CccchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 97 SFDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 97 ~~D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
+||+|++.. +..+...+++++.+.|+|||.+++.+....
T Consensus 75 ~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 75 SVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp CEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 899999874 334667899999999999999999875543
No 177
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.49 E-value=1.3e-13 Score=104.64 Aligned_cols=101 Identities=22% Similarity=0.237 Sum_probs=82.1
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++.. +.+++++|+++++++.+++++ . +...+++++++|+.+. + + ..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~-~-~-----~~~~ 104 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAI-P-L-----PDES 104 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSC-C-S-----CTTC
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccC-C-C-----CCCC
Confidence 356779999999999999999985 579999999999999999987 2 2345799999998643 1 1 2468
Q ss_pred eeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
||+|++... ..+...+++++.++|+|||.+++.
T Consensus 105 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 105 VHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999998753 235678999999999999999886
No 178
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=5.5e-14 Score=106.57 Aligned_cols=99 Identities=19% Similarity=0.148 Sum_probs=82.5
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++...+ +.+++++|+++.+++.++++ .++++++.+|+.+.. . .++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~------~~~ 95 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P------AQK 95 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C------SSC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c------cCC
Confidence 34567999999999999999999876 78999999999999999987 246899999986532 1 478
Q ss_pred eeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEec
Q 029780 98 FDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 98 ~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
||+|++... ..+...+++++.++|+|||.+++..
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 96 ADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 999998753 3456788999999999999999865
No 179
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.48 E-value=8.4e-14 Score=103.84 Aligned_cols=105 Identities=23% Similarity=0.300 Sum_probs=84.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC----CcEEEEEcchHHHHHHHhhccc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD----HKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++...++. .+++++.+|..+.. +
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~----- 97 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--F----- 97 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--S-----
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--C-----
Confidence 446779999999999999999986 569999999999999999998877652 36899999986431 1
Q ss_pred CCCceeEEEEeCCc---cchH---HHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADK---DNYC---NYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~---~~~~---~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|++.... .+.. .+++.+.++|+|||.+++.+.
T Consensus 98 ~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 98 HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 24789999987532 2223 789999999999999999754
No 180
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.48 E-value=5.1e-14 Score=109.31 Aligned_cols=104 Identities=11% Similarity=0.119 Sum_probs=84.1
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC--CcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD--HKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...+.. .+++++++|..+.. ..++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~ 150 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA--------LDKR 150 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC--------CSCC
T ss_pred CCCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC--------cCCC
Confidence 3459999999999999999986 568999999999999999998876532 57999999987631 1478
Q ss_pred eeEEEEeC------CccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 98 FDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~------~~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
||+|++.. .......+++.+.++|+|||.+++.....
T Consensus 151 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 151 FGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 99998651 12235788999999999999999976544
No 181
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.48 E-value=6.2e-14 Score=104.86 Aligned_cols=103 Identities=15% Similarity=0.107 Sum_probs=78.5
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCC-chhHHHH---HHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVN-RETYEIG---LPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~-~~~~~~a---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
.++.+|||||||+|..+..+++..+ +.+|+++|++ +.+++.| +++....++. ++.++++|+.+. +.. .
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l-~~~-----~ 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESL-PFE-----L 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBC-CGG-----G
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHh-hhh-----c
Confidence 4667999999999999999997655 7899999999 5555555 7777777765 699999998665 221 1
Q ss_pred CCceeEEEEeCCcc--------chHHHHHHHHhccCcCeEEEE
Q 029780 95 EGSFDYAFVDADKD--------NYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 95 ~~~~D~i~id~~~~--------~~~~~~~~~~~~L~~gG~lv~ 129 (188)
...+|.|++..... ....+++++.++|||||.+++
T Consensus 95 ~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 KNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred cCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 36788887764321 134678999999999999998
No 182
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.48 E-value=2.3e-13 Score=108.76 Aligned_cols=107 Identities=12% Similarity=0.140 Sum_probs=89.4
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.+..+|||+|||+|..+..+++..| +.+++++|+ +++++.+++++...++.+++++..+|..+ .+ ..+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~---~~------p~~~ 269 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE---TI------PDGA 269 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT---CC------CSSC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC---CC------CCCc
Confidence 4567999999999999999999987 789999999 99999999999998888899999999862 11 2389
Q ss_pred eEEEEeCCc---cc--hHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 99 DYAFVDADK---DN--YCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 99 D~i~id~~~---~~--~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
|+|++.... .+ ...+++++.+.|+|||.+++.+...+.
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999987422 22 236899999999999999998877543
No 183
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.48 E-value=1.4e-13 Score=108.40 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=88.8
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
+..+|||+|||+|..+..+++.+| +.+++++|+ +++++.+++++...++.+++++..+|..+. + ..+||
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------p~~~D 237 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP---L------PAGAG 237 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------CCSCS
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC---C------CCCCc
Confidence 357999999999999999999987 789999999 999999999999988888999999998631 1 23899
Q ss_pred EEEEeCCc---c--chHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 100 YAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 100 ~i~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
+|++.... . ....+++++.+.|+|||.+++.+...+.
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99986421 2 2467899999999999999998877644
No 184
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.48 E-value=2.7e-14 Score=106.65 Aligned_cols=102 Identities=14% Similarity=0.078 Sum_probs=80.4
Q ss_pred HHHHHHHHH--HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 9 GQLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 9 ~~~l~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
..++..++. ..++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++ .++++++++|..+.++
T Consensus 35 ~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~ 105 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELP 105 (226)
T ss_dssp THHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccC
Confidence 344444443 356789999999999999999987 56999999999999999987 2368999999854322
Q ss_pred HHhhcccC-CCceeEEEEeCCccchHHHHHHHHhccCcCeEEE
Q 029780 87 QLLKYSEN-EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 128 (188)
Q Consensus 87 ~~~~~~~~-~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv 128 (188)
+ . .++||+|++.. +...+++.+.++|+|||.++
T Consensus 106 -~-----~~~~~fD~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 -A-----GLGAPFGLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -T-----TCCCCEEEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred -C-----cCCCCEEEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 1 1 46899999973 44567888999999999999
No 185
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.47 E-value=9e-13 Score=104.88 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=88.8
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||||||+|..+..+++..+ +.+++++|+ +++++.++++++..++.++++++.+|..+. . ...
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~-------~~~ 256 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE--S-------YPE 256 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS--C-------CCC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC--C-------CCC
Confidence 34667999999999999999999987 789999999 999999999999988888899999998653 1 234
Q ss_pred eeEEEEeCCc---c--chHHHHHHHHhccCcCeEEEEeccccC
Q 029780 98 FDYAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 98 ~D~i~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
+|+|++.... . ....+++++.+.|+|||.+++.+...+
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 5999987432 2 256789999999999999988775543
No 186
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.47 E-value=7.5e-13 Score=94.69 Aligned_cols=105 Identities=16% Similarity=0.177 Sum_probs=81.4
Q ss_pred CCcHHHHHHHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc
Q 029780 3 GTAPDAGQLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 80 (188)
Q Consensus 3 ~~~~~~~~~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 80 (188)
...+++..++.. +.. .++.+|||+|||+|..+..+++. . +++++|+++.+++. .++++++++|
T Consensus 5 ~P~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d 69 (170)
T 3q87_B 5 EPGEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRAD 69 (170)
T ss_dssp CCCHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECS
T ss_pred CcCccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECC
Confidence 345777777777 444 67789999999999999999885 4 99999999999886 3468899999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCcc------------chHHHHHHHHhccCcCeEEEEec
Q 029780 81 ALSVLDQLLKYSENEGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~D~i~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+.+..+ .++||+|+++.... ....+++.+.+.+ |||.+++..
T Consensus 70 ~~~~~~--------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 70 LLCSIN--------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTTTBC--------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred hhhhcc--------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 876321 36899999975322 2356778888888 999998854
No 187
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.47 E-value=3.2e-13 Score=101.34 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=84.2
Q ss_pred HHHHHHHHH-cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 10 QLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 10 ~~l~~l~~~-~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
.++..+... .++.+|||+|||+|..+..+++. .+++++|+++++++.+++++...+ .+++++++|..+.. +
T Consensus 22 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~ 93 (243)
T 3d2l_A 22 EWVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELE--L 93 (243)
T ss_dssp HHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCC--C
T ss_pred HHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcC--C
Confidence 344444443 34579999999999999998875 599999999999999999988765 46899999986531 1
Q ss_pred hhcccCCCceeEEEEeC-C------ccchHHHHHHHHhccCcCeEEEEe
Q 029780 89 LKYSENEGSFDYAFVDA-D------KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~-~------~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.++||+|++.. . ......+++.+.++|+|||.++++
T Consensus 94 ------~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 ------PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ------SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 36899999864 1 134567889999999999999984
No 188
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.47 E-value=3.5e-13 Score=105.00 Aligned_cols=107 Identities=18% Similarity=0.199 Sum_probs=76.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC-----cEEEEEcchH----H-HHHHHh
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-----KINFIESEAL----S-VLDQLL 89 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-----~~~~~~~d~~----~-~~~~~~ 89 (188)
++.+|||+|||+|..+..++.. ...+|+++|+++++++.|++.....+... ++++.+.|.. . .++...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 3579999999999755555543 14699999999999999999887665321 2567777662 1 122111
Q ss_pred hcccCCCceeEEEEeCC------ccchHHHHHHHHhccCcCeEEEEecc
Q 029780 90 KYSENEGSFDYAFVDAD------KDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~------~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|++... ..+...+++++.++|||||++++...
T Consensus 126 ----~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 ----YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp ----CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2468999987531 13457899999999999999998654
No 189
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.46 E-value=1.1e-13 Score=103.78 Aligned_cols=107 Identities=14% Similarity=0.214 Sum_probs=83.8
Q ss_pred HHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhc
Q 029780 12 MAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY 91 (188)
Q Consensus 12 l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 91 (188)
+..++...++.+|||+|||+|..+..++... ..+++++|+++++++.++++... .+++++++|..+.. +
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~--- 103 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHG--ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L--- 103 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C---
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHCC--CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C---
Confidence 4444444567899999999999999998862 23999999999999999887532 36899999986531 1
Q ss_pred ccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEec
Q 029780 92 SENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 92 ~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..++||+|++... ..+...+++.+.++|+|||.+++..
T Consensus 104 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 --PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 1478999998753 3456789999999999999999864
No 190
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.46 E-value=2.6e-13 Score=107.71 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=83.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++.+|..+. .+ .++
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~--~~------~~~ 116 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQ 116 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSC
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC--CC------CCc
Confidence 457789999999999999999885 2 56999999996 8899999999989888899999998653 11 368
Q ss_pred eeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
||+|++... .......+..+.++|+|||.+++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 999998742 234567778888999999999854
No 191
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.46 E-value=1.4e-13 Score=101.39 Aligned_cols=100 Identities=16% Similarity=0.092 Sum_probs=80.6
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ ++.++.+|..+.. ..+
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--------~~~ 101 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--------AID 101 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--------CCS
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--------CCC
Confidence 3456779999999999999999986 569999999999999999886 3567788876542 157
Q ss_pred ceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 97 SFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 97 ~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+||+|++.... .....+++.+.++|+|||.+++.....
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 102 AYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp CEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 99999987532 255688999999999999999975443
No 192
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=6e-14 Score=106.92 Aligned_cols=110 Identities=14% Similarity=0.063 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+...+.+...+...++.+|||+|||+|..+..++. + +.+++++|+++.+++.++++. +++++++|+.+.
T Consensus 20 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~- 88 (261)
T 3ege_A 20 IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--Q-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL- 88 (261)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--T-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC-
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--C-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC-
Confidence 34444444444556788999999999999999997 3 789999999999888766542 699999998653
Q ss_pred HHHhhcccCCCceeEEEEeC---CccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 86 DQLLKYSENEGSFDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
+ + ..++||+|++.. +..+...+++++.++|| ||.+++.+..
T Consensus 89 ~-~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 89 A-L-----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp C-S-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred C-C-----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 1 1 247899999875 33567889999999999 9977765543
No 193
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.46 E-value=3.1e-13 Score=106.47 Aligned_cols=103 Identities=9% Similarity=0.054 Sum_probs=86.8
Q ss_pred CEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEE
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 101 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i 101 (188)
.+|||+|||+|..+..+++..+ +.+++++|+ +++++.+++++...++.++++++.+|..+. + .++||+|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~D~v 237 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V------PSNGDIY 237 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C------CSSCSEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C------CCCCCEE
Confidence 7999999999999999999887 789999999 999999999988777777899999998651 2 3579999
Q ss_pred EEeCCc---c--chHHHHHHHHhccCcCeEEEEeccccC
Q 029780 102 FVDADK---D--NYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 102 ~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
++.... . ....+++++.+.|+|||.+++.+...+
T Consensus 238 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 238 LLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred EEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 987532 1 234789999999999999999877653
No 194
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=1.9e-13 Score=103.30 Aligned_cols=103 Identities=9% Similarity=0.132 Sum_probs=83.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++... .+++++++|..+. + + ..++|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~-~-----~~~~f 159 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETA-T-L-----PPNTY 159 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGC-C-C-----CSSCE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHC-C-C-----CCCCe
Confidence 456799999999999999988764 358999999999999999987543 4799999998653 1 1 24689
Q ss_pred eEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 99 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
|+|++.... .....+++.+.++|+|||.+++.+..
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 999987532 33567899999999999999997643
No 195
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.45 E-value=1.2e-12 Score=104.63 Aligned_cols=123 Identities=13% Similarity=0.121 Sum_probs=88.0
Q ss_pred CCcHHHH-HHHHHHHHHc--CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc
Q 029780 3 GTAPDAG-QLMAMLLRLV--NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES 79 (188)
Q Consensus 3 ~~~~~~~-~~l~~l~~~~--~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 79 (188)
++.+... ++..++.... .+.+|||+|||+|..++.+|+. ..+|+++|+++++++.|++|++.+++. +++++.+
T Consensus 193 Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~ 268 (369)
T 3bt7_A 193 QPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHID-NVQIIRM 268 (369)
T ss_dssp CSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECC
T ss_pred cCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEC
Confidence 3444443 4444444433 3578999999999999999985 459999999999999999999998874 7999999
Q ss_pred chHHHHHHHhhcc---------cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 80 EALSVLDQLLKYS---------ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 80 d~~~~~~~~~~~~---------~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|+.+.++.+.... ....+||+|++|.+... ..+.+.+.|+++|.+++...
T Consensus 269 d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g---~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 269 AAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG---LDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp CSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC---CCHHHHHHHTTSSEEEEEES
T ss_pred CHHHHHHHHhhccccccccccccccCCCCEEEECcCccc---cHHHHHHHHhCCCEEEEEEC
Confidence 9988876553110 00037999999975432 23345556668887776543
No 196
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.45 E-value=2.2e-13 Score=108.35 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=86.9
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..+++..+ +.+++++|+ +++++.+++++...++.++++++.+|..+. + ...|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~ 250 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP---L------PRKA 250 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------SSCE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC---C------CCCc
Confidence 4567999999999999999999886 789999999 999999999999988877899999998642 1 2359
Q ss_pred eEEEEeCCcc-----chHHHHHHHHhccCcCeEEEEeccc
Q 029780 99 DYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
|+|++..... ....+++++.+.|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999875321 2247899999999999999987766
No 197
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.45 E-value=5.4e-13 Score=106.58 Aligned_cols=105 Identities=14% Similarity=0.259 Sum_probs=84.7
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++++|||||||+|..+++.|++- ..+|++||.++ ++..|+++++.+++.++++++++++.+. .+ .+
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~--~l------pe 148 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV--EL------PE 148 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SS
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee--cC------Cc
Confidence 35678999999999999998888763 35899999985 8999999999999999999999998764 22 46
Q ss_pred ceeEEEEeC------CccchHHHHHHHHhccCcCeEEEEecc
Q 029780 97 SFDYAFVDA------DKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 97 ~~D~i~id~------~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
++|+|+... .......++....++|+|||.++.+..
T Consensus 149 ~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 149 QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred cccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 899998742 223456677777799999999886543
No 198
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.45 E-value=3.6e-13 Score=107.60 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=86.5
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..+++..+ +.+++++|+ +++++.+++++...++.++++++.+|..+. + ...|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~------~~~~ 249 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP---L------PVTA 249 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC---C------SCCE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc---C------CCCC
Confidence 4567999999999999999999886 789999999 999999999999888887899999998642 1 2359
Q ss_pred eEEEEeCCc---c--chHHHHHHHHhccCcCeEEEEecc
Q 029780 99 DYAFVDADK---D--NYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 99 D~i~id~~~---~--~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|+|++.... . ....+++++.+.|+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999987532 1 224789999999999999988776
No 199
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=1.6e-13 Score=105.46 Aligned_cols=100 Identities=17% Similarity=0.127 Sum_probs=81.7
Q ss_pred HHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 16 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
+...++.+|||+|||+|..+..++. + +.+++++|+++.+++.+++++ +++.+..+|+.+. + + .
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~------~ 115 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNF-R-V------D 115 (279)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTC-C-C------S
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhC-C-c------C
Confidence 3445678999999999999999998 3 789999999999999998864 3588899998652 1 1 3
Q ss_pred CceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecc
Q 029780 96 GSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 96 ~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
++||+|++... ..+...+++++.++|+|||.+++...
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 68999998753 24567899999999999999998643
No 200
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.45 E-value=6.1e-13 Score=106.53 Aligned_cols=108 Identities=23% Similarity=0.243 Sum_probs=86.4
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+..+..|..++ ..++.+|||+|||+|..++.++...+ .++|+++|+++.+++.|+++++..++.+++++.++|+.+.
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 455666666666 66778999999999999999998754 5699999999999999999999999877899999999775
Q ss_pred HHHHhhcccCCCceeEEEEeCCc-------c----chHHHHHHHHhcc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADK-------D----NYCNYHERLMKLL 121 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~-------~----~~~~~~~~~~~~L 121 (188)
.. ..++||+|+++.+. . .+..+++.+.++|
T Consensus 281 ~~-------~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 281 SQ-------YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp GG-------TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred Cc-------ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 21 14789999998531 1 1356777888878
No 201
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.44 E-value=1.4e-12 Score=101.81 Aligned_cols=119 Identities=18% Similarity=0.160 Sum_probs=89.6
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
..++..++...++.+|||+|||+|..+..+|..+...++|+++|+++++++.++++++++++. +++++++|+.+.....
T Consensus 91 s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 91 SCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSD 169 (309)
T ss_dssp GGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccc
Confidence 445555666777889999999999999999987654689999999999999999999999875 5999999987642211
Q ss_pred hhcccCCCceeEEEEeCCcc--------------------c-------hHHHHHHHHhccCcCeEEEEeccc
Q 029780 89 LKYSENEGSFDYAFVDADKD--------------------N-------YCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~--------------------~-------~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
. ...+||.|++|.+.. . ..++++.++++++ ||.||.....
T Consensus 170 ~----~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 170 P----RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp G----GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred c----ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 0 015799999984320 1 0134666677786 9998876544
No 202
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=7.8e-13 Score=105.89 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=83.1
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++++|||+| |+|..+..++...+ ..+|+++|+++++++.|+++++..++. +++++++|+.+.++.. ..++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~-----~~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDY-----ALHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTT-----TSSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhh-----ccCCcc
Confidence 578999999 99999999988754 579999999999999999999998876 7999999987632210 035899
Q ss_pred EEEEeCCc--cchHHHHHHHHhccCcCe-EEEEe
Q 029780 100 YAFVDADK--DNYCNYHERLMKLLKVGG-IAVYD 130 (188)
Q Consensus 100 ~i~id~~~--~~~~~~~~~~~~~L~~gG-~lv~~ 130 (188)
+|+++... .....+++.+.+.|+||| ++++.
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 99998632 234678899999999999 43443
No 203
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.44 E-value=3.6e-13 Score=101.04 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=82.3
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||+|||+|..+..++.. +.+++++|+++.+++.++++. ...+++++++|..+.. + ..++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~--~-----~~~~ 116 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP--F-----ENEQ 116 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS--S-----CTTC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC--C-----CCCC
Confidence 345679999999999999999986 569999999999999998764 2357999999986531 1 2478
Q ss_pred eeEEEEeC---CccchHHHHHHHHhccCcCeEEEEecc
Q 029780 98 FDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 98 ~D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
||+|++.. +..+...+++.+.++|+|||.+++...
T Consensus 117 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 117 FEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp EEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence 99999874 345667899999999999999999763
No 204
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.44 E-value=1.6e-12 Score=99.92 Aligned_cols=110 Identities=9% Similarity=0.036 Sum_probs=83.2
Q ss_pred CCCEEEEEcccc---hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH-----hhc
Q 029780 20 NAKKTIEIGVFT---GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL-----LKY 91 (188)
Q Consensus 20 ~~~~vLeiG~g~---G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~ 91 (188)
...+|||||||+ |..+..+++..+ +.+|+++|++|.+++.|++++.. .++++++.+|..+....+ ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 447999999999 988777766665 78999999999999999998743 347999999986531100 000
Q ss_pred ccCCCceeEEEEeCC---cc--chHHHHHHHHhccCcCeEEEEecccc
Q 029780 92 SENEGSFDYAFVDAD---KD--NYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 92 ~~~~~~~D~i~id~~---~~--~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
.+..+||+|++... .. ....+++++.+.|+|||.+++.+...
T Consensus 153 -~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 -IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp -CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred -CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 12358999998642 12 36789999999999999999987654
No 205
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.44 E-value=1.1e-12 Score=101.47 Aligned_cols=109 Identities=12% Similarity=0.100 Sum_probs=76.9
Q ss_pred CCCEEEEEcccchHHHHHHH----hhCCCCCEE--EEEeCCchhHHHHHHHHHhc-CCCCcEE--EEEcchHHHHHHHhh
Q 029780 20 NAKKTIEIGVFTGYSLLLTA----LTIPEDGQI--TAIDVNRETYEIGLPIIKKA-GVDHKIN--FIESEALSVLDQLLK 90 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la----~~~~~~~~v--~~iD~~~~~~~~a~~~~~~~-~~~~~~~--~~~~d~~~~~~~~~~ 90 (188)
++.+|||||||+|..+..++ ...+ +.++ +++|+++++++.|+++++.. ++ .++. +..+++.+....+..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 45699999999998765443 3333 5544 99999999999999988654 33 3344 456666554322110
Q ss_pred cccCCCceeEEEEeC---CccchHHHHHHHHhccCcCeEEEEec
Q 029780 91 YSENEGSFDYAFVDA---DKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 91 ~~~~~~~~D~i~id~---~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....++||+|++.. +..+....++++.++|||||.+++..
T Consensus 130 -~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 -KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp -TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 00247899999874 34567889999999999999999853
No 206
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.43 E-value=3.5e-13 Score=102.75 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=74.6
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH-HHHHHhhccc
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS-VLDQLLKYSE 93 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~ 93 (188)
.+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|++++... .+..-..+... ....+
T Consensus 40 ~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~----- 107 (261)
T 3iv6_A 40 LENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKEL----- 107 (261)
T ss_dssp TTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGG-----
T ss_pred hcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccccc-----
Confidence 334567789999999999999999985 569999999999999999987543 12222222210 00111
Q ss_pred CCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++||+|+++... ......+..+.++| |||.+++..
T Consensus 108 -~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 108 -AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp -TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred -CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 3689999998532 33456788888999 999999863
No 207
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.43 E-value=3.1e-13 Score=107.08 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=83.1
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.+++++...++. .+++.+|..+.. .++|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~---------~~~f 262 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV---------KGRF 262 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC---------CSCE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc---------cCCe
Confidence 3566999999999999999999875 679999999999999999999887764 567888876431 3689
Q ss_pred eEEEEeCCcc--------chHHHHHHHHhccCcCeEEEEec
Q 029780 99 DYAFVDADKD--------NYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 99 D~i~id~~~~--------~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
|+|+++.... ....+++.+.++|+|||.+++..
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9999975322 24678899999999999988853
No 208
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=5.8e-13 Score=100.29 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=81.5
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH-HhhcccCCC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEG 96 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~ 96 (188)
..++.+|||+|||+|..+..++...+ +|+++|+++.+++.+++++. ..+++++++|..+.... ..+. ..
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~---~~ 123 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHS---EI 123 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHH---HH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECccccccccccccc---cc
Confidence 34567999999999999999999754 89999999999999998762 23699999998764221 1100 13
Q ss_pred ceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 97 SFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 97 ~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.||+|++... ......+++++.++|+|||.+++.+..
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5999998742 225678999999999999998776554
No 209
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.43 E-value=1.5e-12 Score=100.37 Aligned_cols=115 Identities=17% Similarity=0.127 Sum_probs=79.7
Q ss_pred HHHHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeC-CchhHHHHHHHH-----HhcCCC----CcE
Q 029780 8 AGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDV-NRETYEIGLPII-----KKAGVD----HKI 74 (188)
Q Consensus 8 ~~~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~-~~~~~~~a~~~~-----~~~~~~----~~~ 74 (188)
+..+...+.. ..++++|||+|||+|..++.+++. . ..+|+++|+ ++++++.+++++ +..++. +++
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 3344444443 246789999999999999998875 2 359999999 899999999998 555543 467
Q ss_pred EEEEcchH----HHHHHHhhcccCCCceeEEEE-eC--CccchHHHHHHHHhccC---c--CeEEEE
Q 029780 75 NFIESEAL----SVLDQLLKYSENEGSFDYAFV-DA--DKDNYCNYHERLMKLLK---V--GGIAVY 129 (188)
Q Consensus 75 ~~~~~d~~----~~~~~~~~~~~~~~~~D~i~i-d~--~~~~~~~~~~~~~~~L~---~--gG~lv~ 129 (188)
++...+.. +....+ ..++||+|++ |. +......+++.+.++|+ | ||.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~-----~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCT-----GLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp EEEECCTTSCTHHHHHHH-----SCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred EEEEecCCCccHHHHhhc-----cCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 87754422 222211 1478999987 42 34557789999999999 9 997655
No 210
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.43 E-value=4.9e-13 Score=99.05 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=77.8
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHH----HHhcCCCCcEEEEEcchHHHHHHHhhcc
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPI----IKKAGVDHKINFIESEALSVLDQLLKYS 92 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 92 (188)
...++.+|||+|||+|..+..++...+ +.+|+++|+++++++.+.++ ....++ ++++++++|+.+. + +
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l-~-~---- 95 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERL-P-P---- 95 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTC-C-S----
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhC-C-C----
Confidence 355677999999999999999999876 78999999999988864332 223444 3699999998763 1 1
Q ss_pred cCCCceeEEEEeCCc--------cchHHHHHHHHhccCcCeEEEEe
Q 029780 93 ENEGSFDYAFVDADK--------DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 93 ~~~~~~D~i~id~~~--------~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..+. |.+++.... .+...+++++.++|||||.+++.
T Consensus 96 -~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 96 -LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp -CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred -CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 1234 777755421 12267899999999999999984
No 211
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.43 E-value=1.4e-12 Score=105.96 Aligned_cols=114 Identities=20% Similarity=0.171 Sum_probs=87.9
Q ss_pred CCcHHHH-HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 3 GTAPDAG-QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 3 ~~~~~~~-~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
+..+... .++..+....++.+|||+|||+|..++.+|+. ..+|+++|+++++++.|+++++.+++. ++++.+|+
T Consensus 272 q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~ 346 (425)
T 2jjq_A 272 QTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASD 346 (425)
T ss_dssp CSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCT
T ss_pred ccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECCh
Confidence 3344443 44555555667789999999999999999986 469999999999999999999988875 99999998
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchH-HHHHHHHhccCcCeEEEEec
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYC-NYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~-~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+ ..+||+|++|.+..... .+++.+ ..|+|+|++++..
T Consensus 347 ~~~~---------~~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 347 REVS---------VKGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp TTCC---------CTTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEES
T ss_pred HHcC---------ccCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEEC
Confidence 7642 13799999997644333 355555 4589999998863
No 212
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.42 E-value=3.8e-12 Score=93.38 Aligned_cols=111 Identities=11% Similarity=0.108 Sum_probs=84.6
Q ss_pred CcHHHHHHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc
Q 029780 4 TAPDAGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 80 (188)
Q Consensus 4 ~~~~~~~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 80 (188)
+++...+.+...+. ..++.+|||+|||+|..+..++... ..+++++|+++.+++.+++++...++ +++++++|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 105 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGD 105 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESC
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECc
Confidence 44555555544443 3356799999999999999998862 35899999999999999999988776 69999999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEe
Q 029780 81 ALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+.+. ..+||+|+++.+. .....+++.+.+.+ |+.+++.
T Consensus 106 ~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 106 VSEF----------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp GGGC----------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred hHHc----------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 8763 2589999998642 23357788888887 6666554
No 213
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.42 E-value=8.5e-13 Score=103.07 Aligned_cols=108 Identities=13% Similarity=0.088 Sum_probs=82.2
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC------CCCcEEEEEcchHHHH--HHHhhc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG------VDHKINFIESEALSVL--DQLLKY 91 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~------~~~~~~~~~~d~~~~~--~~~~~~ 91 (188)
++.+|||+|||+|..+..++.. + ..+++++|+++++++.+++++...+ ...+++++++|..+.. ..+.+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~- 110 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD- 110 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS-
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc-
Confidence 6679999999999999998874 2 6799999999999999999887642 2346899999986531 01110
Q ss_pred ccCCCceeEEEEeCCc-------cchHHHHHHHHhccCcCeEEEEecc
Q 029780 92 SENEGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|++.... .....+++++.++|+|||.+++...
T Consensus 111 --~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 111 --PQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp --TTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred --CCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 13589999987532 2345789999999999999998644
No 214
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.42 E-value=8.6e-13 Score=108.80 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=82.1
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++.+|..+. .+ .++|
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~--~~------~~~f 225 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV--SL------PEQV 225 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------SSCE
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC--cc------CCCe
Confidence 46789999999999999998874 3 57999999998 9999999999999888899999998653 11 3689
Q ss_pred eEEEEeCC-----ccchHHHHHHHHhccCcCeEEEE
Q 029780 99 DYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 99 D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
|+|++... .......+..+.++|+|||.+++
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99998743 13345566777899999999985
No 215
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=1e-12 Score=95.02 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=82.1
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
+++..+ ..++.+|||+|||+|..+..++.. +.+++++|+++.+++.+++++ .+++++.+|..+. .+
T Consensus 38 ~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~--~~- 103 (195)
T 3cgg_A 38 RLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVD--QI- 103 (195)
T ss_dssp HHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTS--CC-
T ss_pred HHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccC--CC-
Confidence 444444 346779999999999999999986 569999999999999999875 2478899988653 11
Q ss_pred hcccCCCceeEEEEeCC-c-----cchHHHHHHHHhccCcCeEEEEecc
Q 029780 90 KYSENEGSFDYAFVDAD-K-----DNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~-~-----~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|++... . .....+++.+.++|+|||.+++...
T Consensus 104 ----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 104 ----SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp ----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 1468999999732 1 2346788999999999999998643
No 216
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.41 E-value=1.1e-12 Score=98.06 Aligned_cols=99 Identities=11% Similarity=0.144 Sum_probs=79.4
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..+++.. .+++++|+++++++.+++++ ++++++.+|..+.. + .++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~--~------~~~~ 101 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFR--L------GRKF 101 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCC--C------SSCE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcc--c------CCCC
Confidence 466799999999999999999874 39999999999999999864 35889999986531 1 3689
Q ss_pred eEEEEeCC----c---cchHHHHHHHHhccCcCeEEEEecccc
Q 029780 99 DYAFVDAD----K---DNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 99 D~i~id~~----~---~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
|+|++... . .....+++.+.++|+|||.+++.+...
T Consensus 102 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 102 SAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred cEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 99995421 1 345678999999999999999986543
No 217
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.41 E-value=2.4e-13 Score=100.02 Aligned_cols=103 Identities=10% Similarity=0.053 Sum_probs=81.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++...+ .+++++|+++.+++.++++... .++++++++|+.+. .+ ..++|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~--~~-----~~~~f 108 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL--DF-----PSASF 108 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC--CS-----CSSCE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC--CC-----CCCcc
Confidence 4667999999999999999998633 3899999999999999998754 24689999998653 11 24689
Q ss_pred eEEEEeCC------------------ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 99 DYAFVDAD------------------KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~------------------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
|+|++... ......+++.+.++|+|||.+++.+..
T Consensus 109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 99997632 123467889999999999999986543
No 218
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.41 E-value=1.1e-13 Score=105.13 Aligned_cols=110 Identities=20% Similarity=0.100 Sum_probs=81.5
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC----------------------------
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV---------------------------- 70 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~---------------------------- 70 (188)
.++.+|||+|||+|..+..++.... .+|+++|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 3556899999999999988887521 4899999999999999998765331
Q ss_pred CCcE-EEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 71 DHKI-NFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 71 ~~~~-~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..++ .++++|..+..+. .. ...++||+|++.... .....+++++.++|+|||.+++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~-~~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPL-GG--VSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTT-TT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCC-Cc--cccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0127 8889988653211 00 012689999987532 25678899999999999999997644
No 219
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.40 E-value=1.5e-11 Score=93.04 Aligned_cols=148 Identities=15% Similarity=0.062 Sum_probs=101.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhh------CCCCCEEEEEeC-----Cch-------------------hHHHHHH-----
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALT------IPEDGQITAIDV-----NRE-------------------TYEIGLP----- 63 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~------~~~~~~v~~iD~-----~~~-------------------~~~~a~~----- 63 (188)
.-+..|+|+|+..|.++..++.. .....+++++|. .+. ..+..++
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44669999999999999997752 123679999993 221 0111222
Q ss_pred -HHHhcCC-CCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-cchHHHHHHHHhccCcCeEEEEeccccCccccC
Q 029780 64 -IIKKAGV-DHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-DNYCNYHERLMKLLKVGGIAVYDNTLWGGTVAV 140 (188)
Q Consensus 64 -~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~ 140 (188)
+++..+. .++++++.|++.+.++.+.+. ....++|++++|++. ......++.++++|++||+|+++|..++.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~-~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~---- 222 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAE-NPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPK---- 222 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHH-CTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTT----
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHh-CCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCC----
Confidence 2234555 478999999999999886543 123479999999976 45667899999999999999999975311
Q ss_pred CCCCCCCCcccchHHHHHHHHHHhhcCCCeEEEEeecCCceEEE
Q 029780 141 PEEQVPDHFRGSSRQAILDLNRSLADDPRVQLSHVALGDGITIC 184 (188)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~G~~~~ 184 (188)
+ .+ +.+++++| ....+.....+|...+...+
T Consensus 223 ----w----~G-~~~A~~ef----~~~~~~~i~~~p~~~~~~y~ 253 (257)
T 3tos_A 223 ----W----PG-ENIAMRKV----LGLDHAPLRLLPGRPAPAYL 253 (257)
T ss_dssp ----C----TH-HHHHHHHH----TCTTSSCCEECTTCSCCEEE
T ss_pred ----C----hH-HHHHHHHH----HhhCCCeEEEccCCCCCEEE
Confidence 1 11 34444444 34457788888888876654
No 220
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.40 E-value=7.6e-13 Score=94.14 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=74.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH-----HHHhhcc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL-----DQLLKYS 92 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~~~ 92 (188)
..++.+|||+|||+|..+..+++.+.++.+++++|+++ ++.. .+++++.+|..+.. +...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~--- 84 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERV--- 84 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHH---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccC---
Confidence 45677999999999999999999864368999999999 6532 46899999986541 1111
Q ss_pred cCCCceeEEEEeCCcc---ch-----------HHHHHHHHhccCcCeEEEEecc
Q 029780 93 ENEGSFDYAFVDADKD---NY-----------CNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~---~~-----------~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..++||+|+++.... .. ..+++.+.++|+|||.+++...
T Consensus 85 -~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 85 -GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp -TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 246899999975321 11 5788999999999999998643
No 221
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.40 E-value=3.4e-13 Score=99.32 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=77.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..+ . ..+++++|+++++++.+++++ ++++++++|..+. + + ..++||
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~fD 97 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEAL-P-F-----PGESFD 97 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSC-C-S-----CSSCEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccC-C-C-----CCCcEE
Confidence 6679999999999988776 1 239999999999999999875 3588899987643 1 1 246899
Q ss_pred EEEEeCC---ccchHHHHHHHHhccCcCeEEEEecccc
Q 029780 100 YAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 100 ~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
+|++... ..+...+++++.++|+|||.+++.....
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 98 VVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9998752 3456789999999999999999976543
No 222
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.39 E-value=3.1e-12 Score=104.32 Aligned_cols=117 Identities=12% Similarity=0.128 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHH---cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 7 DAGQLMAMLLRL---VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 7 ~~~~~l~~l~~~---~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
.+..++..++.. .++.+|||+|||+|..+..++.. ..+|+++|+++++++.|+++++.+++. +++++++|+.+
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~ 345 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTS
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHH
Confidence 355555555443 35679999999999999999986 579999999999999999999988876 79999999977
Q ss_pred HHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 84 VLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++.+.. ..++||+|++|.+.....+.++.+. .++|++++.++.
T Consensus 346 ~l~~~~~---~~~~fD~Vv~dPPr~g~~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 346 DVTKQPW---AKNGFDKVLLDPARAGAAGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp CCSSSGG---GTTCCSEEEECCCTTCCHHHHHHHH-HHCCSEEEEEES
T ss_pred Hhhhhhh---hcCCCCEEEECCCCccHHHHHHHHH-hcCCCeEEEEEC
Confidence 4332110 1358999999976554555665554 478899887753
No 223
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=4.3e-12 Score=92.72 Aligned_cols=107 Identities=13% Similarity=0.173 Sum_probs=79.2
Q ss_pred CcHHHHHHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc
Q 029780 4 TAPDAGQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE 80 (188)
Q Consensus 4 ~~~~~~~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d 80 (188)
+.+.....+..++. ..++.+|||+|||+|..+..++.. + ..+++++|+++++++.+++++. +++++++|
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d 103 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVAD 103 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECc
Confidence 44444444444443 236679999999999999999886 2 4589999999999999999864 58999999
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEe
Q 029780 81 ALSVLDQLLKYSENEGSFDYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+.+. .++||+|+++... .....+++.+.+.+ |+++++.
T Consensus 104 ~~~~----------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 104 VSEI----------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp GGGC----------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred HHHC----------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 8753 2689999998642 12346788888887 6655554
No 224
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.36 E-value=3.6e-12 Score=98.49 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=72.9
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+...+.+...+...++.+|||||||+|..+..++.. +.+++++|+++++++.+++++...+..++++++++|+.+.
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3444444444445567789999999999999999987 4599999999999999999987766656899999998754
Q ss_pred HHHHhhcccCCCceeEEEEeCCccc
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDN 109 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~ 109 (188)
. ..+||+|+.+.....
T Consensus 90 --~-------~~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 90 --D-------LPFFDTCVANLPYQI 105 (285)
T ss_dssp --C-------CCCCSEEEEECCGGG
T ss_pred --c-------chhhcEEEEecCccc
Confidence 1 358999999865433
No 225
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.36 E-value=1.5e-12 Score=99.02 Aligned_cols=96 Identities=17% Similarity=0.224 Sum_probs=76.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++.+|||+|||+|..+..++.. +.+++++|+++++++.++++.. .+ ++.+|+.+. + + ..++||
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~-~-~-----~~~~fD 116 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDL-P-F-----PSGAFE 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSC-C-S-----CTTCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHC-C-C-----CCCCEE
Confidence 6779999999999999999885 5699999999999999998753 12 778887543 1 1 246899
Q ss_pred EEEEeCC----ccchHHHHHHHHhccCcCeEEEEecc
Q 029780 100 YAFVDAD----KDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 100 ~i~id~~----~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+|++... ..+...+++++.++|+|||.+++...
T Consensus 117 ~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 117 AVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp EEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998642 23467899999999999999998643
No 226
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.35 E-value=3.1e-12 Score=97.65 Aligned_cols=96 Identities=18% Similarity=0.228 Sum_probs=77.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++..++ +.+++++|+++++++.++++. .++.+..+|..+. + + ..++|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~-----~~~~f 149 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F-----SDTSM 149 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B-----CTTCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C-----CCCce
Confidence 4677999999999999999999875 679999999999999998763 3578889887543 1 1 24689
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|+|+..... ..++++.++|+|||.+++...
T Consensus 150 D~v~~~~~~----~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 150 DAIIRIYAP----CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp EEEEEESCC----CCHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeCCh----hhHHHHHHhcCCCcEEEEEEc
Confidence 999986543 247888999999999988643
No 227
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.34 E-value=2.9e-12 Score=98.77 Aligned_cols=108 Identities=19% Similarity=0.242 Sum_probs=88.5
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--C-C-CCcEEEEEcchHHHHHHHhhcc
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--G-V-DHKINFIESEALSVLDQLLKYS 92 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~-~-~~~~~~~~~d~~~~~~~~~~~~ 92 (188)
...++++||-||.|.|..+..++++.+ ..+|+.||++++.++.+++.+... + + .++++++.+|+..++..
T Consensus 80 ~~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~----- 153 (294)
T 3o4f_A 80 AHGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ----- 153 (294)
T ss_dssp HSSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC-----
T ss_pred hCCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh-----
Confidence 456788999999999999999998754 679999999999999999987542 1 1 37899999999887654
Q ss_pred cCCCceeEEEEeCCcc-------chHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKD-------NYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~-------~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..++||+|++|.... ...++++.+.+.|+|||+++...
T Consensus 154 -~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 154 -TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp -SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred -ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 257899999995321 23578999999999999999853
No 228
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.33 E-value=4.7e-12 Score=96.34 Aligned_cols=108 Identities=17% Similarity=0.127 Sum_probs=79.0
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-------CC----CCEEEEEeCCc--------------hhHHHHHHHHHhcC-----
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-------PE----DGQITAIDVNR--------------ETYEIGLPIIKKAG----- 69 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-------~~----~~~v~~iD~~~--------------~~~~~a~~~~~~~~----- 69 (188)
++.+|||||+|+|++++.++..+ |. ..+++++|..| +....+++.++.++
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 44699999999999999877653 32 25899999887 44456777766521
Q ss_pred -----CC---CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc--c----hHHHHHHHHhccCcCeEEEE
Q 029780 70 -----VD---HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--N----YCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 70 -----~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~--~----~~~~~~~~~~~L~~gG~lv~ 129 (188)
+. .+++++.+|+.+.++.+... ....||+||+|+... + ..++++.+.++|+|||+++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~--~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGG--GTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccc--cCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 11 35779999999987765211 013799999997321 2 46799999999999999986
No 229
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.33 E-value=4.6e-13 Score=102.23 Aligned_cols=110 Identities=22% Similarity=0.099 Sum_probs=76.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC---------------------------
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD--------------------------- 71 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~--------------------------- 71 (188)
.++.+|||||||+|..+..++... ..+|+++|+++.+++.|+++++.....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 355689999999997766655431 247999999999999999987653210
Q ss_pred -CcEE-EEEcchHHHHHHHhhcccCCCceeEEEEeCC-------ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 72 -HKIN-FIESEALSVLDQLLKYSENEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 72 -~~~~-~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++. ++++|..+..+ +.. ...++||+|++... ..+....+.++.++|||||.+++.+..
T Consensus 132 ~~~i~~~~~~D~~~~~~-~~~--~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNP-LAP--AVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSST-TTT--CCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCC-CCc--cccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 1233 77777754211 000 01368999998632 134567889999999999999998644
No 230
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.32 E-value=3e-12 Score=101.38 Aligned_cols=117 Identities=17% Similarity=0.151 Sum_probs=90.0
Q ss_pred CcHHHHHHHHHHHH----HcCCCEEEEEcccchHHHHHHHhhCCCC----CEEEEEeCCchhHHHHHHHHHhcCCCCcEE
Q 029780 4 TAPDAGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIPED----GQITAIDVNRETYEIGLPIIKKAGVDHKIN 75 (188)
Q Consensus 4 ~~~~~~~~l~~l~~----~~~~~~vLeiG~g~G~~~~~la~~~~~~----~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~ 75 (188)
|++...++|..++. ..++.+|||+|||+|..+..+++.++.. .+++++|+++.+++.|+.++...++ ++.
T Consensus 110 TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~ 187 (344)
T 2f8l_A 110 TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMT 187 (344)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCE
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--Cce
Confidence 45666677666553 2245699999999999999998876522 7899999999999999999887776 478
Q ss_pred EEEcchHHHHHHHhhcccCCCceeEEEEeCCccc---------------------hHHHHHHHHhccCcCeEEEEe
Q 029780 76 FIESEALSVLDQLLKYSENEGSFDYAFVDADKDN---------------------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 76 ~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~---------------------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
++++|+.... ...+||+|+.+.+... ...++..+.+.|+|||.+++.
T Consensus 188 i~~~D~l~~~--------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 188 LLHQDGLANL--------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp EEESCTTSCC--------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEECCCCCcc--------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 9999986521 1468999999864211 125789999999999987764
No 231
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=3.5e-12 Score=94.56 Aligned_cols=103 Identities=19% Similarity=0.230 Sum_probs=80.7
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
...+..+....++.+|||+|||+|..+..++.. +++|+++++++.++++ +++++.+|..+. + +
T Consensus 36 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~ 98 (219)
T 1vlm_A 36 LSELQAVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L 98 (219)
T ss_dssp HHHHHHHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S
T ss_pred HHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C
Confidence 344455666677889999999999999888652 9999999999998876 478888887543 1 1
Q ss_pred hhcccCCCceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 89 LKYSENEGSFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..++||+|++... ..+...+++.+.++|+|||.+++....
T Consensus 99 -----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 99 -----KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp -----CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 2468999998753 345678999999999999999997554
No 232
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.32 E-value=1.9e-12 Score=104.87 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=74.9
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||||||+|..+..++.. +.+++++|+++.+++.|+++ +......++..+..+.++.. .++|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~------~~~f 172 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT------EGPA 172 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH------HCCE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC------CCCE
Confidence 35679999999999999999985 56999999999999988875 33222222222222222221 3799
Q ss_pred eEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecc
Q 029780 99 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 99 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|+|++... ..+...+++.+.++|+|||++++...
T Consensus 173 D~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 173 NVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99998753 34678899999999999999999754
No 233
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.32 E-value=7.9e-12 Score=91.23 Aligned_cols=99 Identities=16% Similarity=0.173 Sum_probs=70.2
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCC-CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH------------
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL------------ 85 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------ 85 (188)
.++.+|||+|||+|..+..+++..++ +++|+++|+++.. . .++++++++|..+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-IPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-CTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-CCCceEEEccccchhhhhhcccccccc
Confidence 46679999999999999999998763 5899999999842 1 235888888875431
Q ss_pred -------HHHhhcccCCCceeEEEEeCCccc-------h-------HHHHHHHHhccCcCeEEEEe
Q 029780 86 -------DQLLKYSENEGSFDYAFVDADKDN-------Y-------CNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 86 -------~~~~~~~~~~~~~D~i~id~~~~~-------~-------~~~~~~~~~~L~~gG~lv~~ 130 (188)
..+... ...++||+|+++..... . ...++.+.++|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~-~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEI-LQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHH-HTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhh-cCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 000000 02368999999853211 1 13677888999999999985
No 234
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.31 E-value=5.4e-11 Score=94.52 Aligned_cols=106 Identities=17% Similarity=0.117 Sum_probs=84.3
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..+..+|+|||||+|..+..+++.+| +.+++..|. |++++.++++++..+ .++++++.+|..+. . ..+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~--~-------~~~ 244 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKD--P-------LPE 244 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTS--C-------CCC
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccC--C-------CCC
Confidence 34567999999999999999999998 889999998 889999998876544 57899999998642 1 357
Q ss_pred eeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEeccccC
Q 029780 98 FDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 98 ~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
+|++++... .+....+++++.+.|+|||.+++.+...+
T Consensus 245 ~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 245 ADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp CSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred ceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 899988642 12335679999999999999888877653
No 235
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.30 E-value=5.3e-12 Score=97.43 Aligned_cols=111 Identities=15% Similarity=0.035 Sum_probs=74.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC-----------------C-----------
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV-----------------D----------- 71 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-----------------~----------- 71 (188)
++.+|||+|||+|..+..++.. + ..+|+++|+++++++.|++++...+- .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 6679999999999954444332 2 56999999999999999987643210 0
Q ss_pred -CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCC-------ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 72 -HKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-------KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 72 -~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~-------~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..++++.+|+.+.++ +.+.....++||+|++... ..+...+++++.++|||||.+++.+..
T Consensus 149 ~~~~~~~~~D~~~~~~-~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQP-LGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp HHEEEEECCCTTSSST-TCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCC-ccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 014556667654211 0000011356999998753 224678899999999999999997543
No 236
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.29 E-value=1.5e-11 Score=89.55 Aligned_cols=107 Identities=20% Similarity=0.210 Sum_probs=73.1
Q ss_pred HHHHHHHHH---HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH-
Q 029780 9 GQLMAMLLR---LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV- 84 (188)
Q Consensus 9 ~~~l~~l~~---~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 84 (188)
-++++.+.. ..++.+|||+|||+|.++..+++. +++|+++|+++.. .. ++++++++|..+.
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~ 75 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKET 75 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSS
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHH
Confidence 344444433 346789999999999999999986 6799999999852 12 4689999997542
Q ss_pred -HHHHhhccc--CCCceeEEEEeCCcc-------c-------hHHHHHHHHhccCcCeEEEEe
Q 029780 85 -LDQLLKYSE--NEGSFDYAFVDADKD-------N-------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 85 -~~~~~~~~~--~~~~~D~i~id~~~~-------~-------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
...+...-. ..++||+|++|..+. + ....++.+.++|+|||.+++.
T Consensus 76 ~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 76 IFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 111110000 014899999985321 0 134567778999999999975
No 237
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.29 E-value=1.3e-11 Score=95.96 Aligned_cols=95 Identities=14% Similarity=0.113 Sum_probs=70.1
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+...+.+...+...++.+|||+|||+|..+..++.. +.+|+++|+++++++.+++++...++ ++++++++|+.+.
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKT 102 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhC
Confidence 3444455555555667789999999999999999975 56999999999999999999887776 5699999998653
Q ss_pred HHHHhhcccCCCceeEEEEeCCccchHH
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDNYCN 112 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~~~~ 112 (188)
..++||+|+++.......+
T Consensus 103 ---------~~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 103 ---------VFPKFDVCTANIPYKISSP 121 (299)
T ss_dssp ---------CCCCCSEEEEECCGGGHHH
T ss_pred ---------CcccCCEEEEcCCcccccH
Confidence 1358999999865443333
No 238
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.28 E-value=1.3e-12 Score=98.16 Aligned_cols=98 Identities=15% Similarity=0.138 Sum_probs=67.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc-chHHHH-HHHhhcccCCCc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVL-DQLLKYSENEGS 97 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~-~~~~~~~~~~~~ 97 (188)
++++|||||||+|..+..+++.. ..+|+++|+++++++.++++.. ++..... +..... ..+ ....
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g--~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~ 103 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG--AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF-----EQGR 103 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC-----CSCC
T ss_pred CCCEEEEEccCCCHHHHHHHhcC--CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc-----CcCC
Confidence 45699999999999999999862 3599999999999998776432 2322221 221110 011 1123
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
||.+.+|........++..+.++|||||.+++.
T Consensus 104 ~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 104 PSFTSIDVSFISLDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CCEEEEEEEhhhHHHHHHHHHHhccCCCEEEEE
Confidence 566666655555678899999999999998884
No 239
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.28 E-value=3.5e-12 Score=97.17 Aligned_cols=91 Identities=18% Similarity=0.184 Sum_probs=73.3
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCc-------hhHHHHHHHHHhcCCCCcEEEEEcch
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNR-------ETYEIGLPIIKKAGVDHKINFIESEA 81 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~-------~~~~~a~~~~~~~~~~~~~~~~~~d~ 81 (188)
.+++...+...++.+|||+|||+|..++.+|.. +++|+++|+++ ++++.|+++.+.+++.++++++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 445555555556679999999999999999985 57999999999 99999999888777666799999999
Q ss_pred HHHHHHHhhcccCCCceeEEEEeC
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDA 105 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~ 105 (188)
.+.++.+.+. .++||+|++|.
T Consensus 149 ~~~l~~~~~~---~~~fD~V~~dP 169 (258)
T 2r6z_A 149 AEQMPALVKT---QGKPDIVYLDP 169 (258)
T ss_dssp HHHHHHHHHH---HCCCSEEEECC
T ss_pred HHHHHhhhcc---CCCccEEEECC
Confidence 8877665321 15899999985
No 240
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.27 E-value=4.9e-12 Score=93.80 Aligned_cols=99 Identities=13% Similarity=0.091 Sum_probs=77.3
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||+|..+..++.. +.+++++|+++++++.++++. .+++.+|..+....+ ..++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~-----~~~~f 94 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY-----EEEQF 94 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS-----CTTCE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC-----CCCcc
Confidence 46779999999999999999886 379999999999999888653 267788875421111 24689
Q ss_pred eEEEEeCC---ccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 99 DYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 99 D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
|+|++... ..+...+++.+.++|+|||.+++....
T Consensus 95 D~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred CEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99998753 335578899999999999999986543
No 241
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.27 E-value=5.4e-12 Score=100.03 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=79.7
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.+..+|||||||+|..+..+++..+ +.+++++|+ ++.+. +++.+..+..++++++.+|..+ . ..+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~---~-------~p~~ 248 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR---E-------VPHA 248 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT---C-------CCCC
T ss_pred cCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC---C-------CCCC
Confidence 3566999999999999999999987 789999999 44444 3333444556789999999852 1 1389
Q ss_pred eEEEEeCC---ccc--hHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 99 DYAFVDAD---KDN--YCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 99 D~i~id~~---~~~--~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
|+|++... ..+ ...+++++.+.|||||.+++.+...+.
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 99998742 222 257899999999999999998876543
No 242
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.27 E-value=6.3e-11 Score=94.07 Aligned_cols=148 Identities=15% Similarity=0.066 Sum_probs=103.7
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC---C----CCcEEEEEcchHHHHHHHhh
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG---V----DHKINFIESEALSVLDQLLK 90 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~---~----~~~~~~~~~d~~~~~~~~~~ 90 (188)
..++++||-||.|.|..+..++++ + ..+|+.||++|+.++.+++.+.... . .++++++.+|+..++.+..+
T Consensus 203 ~~~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 203 DYTGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CCTTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred cCCCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 346789999999999999999885 4 4799999999999999999864321 1 24689999999998876543
Q ss_pred cccCCCceeEEEEeCCc----c---------chHHHHHHHHhccCcCeEEEEeccccCccccCCCCCCCCCcccchHHHH
Q 029780 91 YSENEGSFDYAFVDADK----D---------NYCNYHERLMKLLKVGGIAVYDNTLWGGTVAVPEEQVPDHFRGSSRQAI 157 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~~----~---------~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 157 (188)
. .++||+|++|... . ...++++.+.+.|+|||+++...... + .....
T Consensus 281 ~---~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~----------~-------~~~~~ 340 (381)
T 3c6k_A 281 E---GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV----------N-------LTEAL 340 (381)
T ss_dssp H---TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET----------T-------CHHHH
T ss_pred c---cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC----------c-------chhHH
Confidence 2 4689999999421 0 12567899999999999999753221 0 22235
Q ss_pred HHHHHHhhcC-CCeEE----EEee---cCCceEEEEEc
Q 029780 158 LDLNRSLADD-PRVQL----SHVA---LGDGITICRRI 187 (188)
Q Consensus 158 ~~~~~~~~~~-~~~~~----~~lp---~~~G~~~~~~~ 187 (188)
..+.+.+++- +.+.. ..+| -..|+.++.|+
T Consensus 341 ~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 341 SLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 5566666554 33322 2234 24688888775
No 243
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.26 E-value=5.6e-11 Score=86.26 Aligned_cols=101 Identities=12% Similarity=0.161 Sum_probs=71.2
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCC--------CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEE-EcchHHHHH--
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPED--------GQITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLD-- 86 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~--------~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~~-- 86 (188)
..++.+|||+|||+|..+..+++..+.. .+|+++|+++.. .. .+++++ .+|..+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~ 87 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQ 87 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHH
Confidence 3467899999999999999999987532 799999999842 12 357888 888654211
Q ss_pred HHhhcccCCCceeEEEEeCCcc-------ch-------HHHHHHHHhccCcCeEEEEec
Q 029780 87 QLLKYSENEGSFDYAFVDADKD-------NY-------CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~~~~-------~~-------~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+... ...++||+|+++.... +. ...++.+.++|+|||.+++..
T Consensus 88 ~~~~~-~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 88 RILEV-LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHH-SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHh-cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 11000 0125899999875211 11 367888899999999999864
No 244
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.26 E-value=7.3e-12 Score=96.68 Aligned_cols=99 Identities=22% Similarity=0.114 Sum_probs=71.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhcccCCCce
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~ 98 (188)
++.+|||+|||+|..+..+++. . ..+|+++|+++.+++.+.++ ..++.... .+.......- ....+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~----l~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVD----FTEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGG----CTTCCC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhh----CCCCCC
Confidence 4579999999999999998886 2 46999999999999875432 12343332 3332211110 012459
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|+|++|....+....+..+.++|+|||.+++-
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence 99999987777788999999999999998874
No 245
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.25 E-value=3.5e-11 Score=91.91 Aligned_cols=120 Identities=15% Similarity=0.141 Sum_probs=79.9
Q ss_pred HHHHHHcCCCEEEEEcccc--hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhh
Q 029780 13 AMLLRLVNAKKTIEIGVFT--GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLK 90 (188)
Q Consensus 13 ~~l~~~~~~~~vLeiG~g~--G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 90 (188)
..++......+|||||||. +..+..++....++.+|+++|.||.++..|++.+...+ ..+++++++|..+.-..+..
T Consensus 71 ~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~ 149 (277)
T 3giw_A 71 AHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDA 149 (277)
T ss_dssp HHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTC
T ss_pred HHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcc
Confidence 3333334557999999997 44445555543338999999999999999999886543 24699999998764211100
Q ss_pred cccCCCcee-----EEEEeCC---ccc---hHHHHHHHHhccCcCeEEEEecccc
Q 029780 91 YSENEGSFD-----YAFVDAD---KDN---YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 91 ~~~~~~~~D-----~i~id~~---~~~---~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
. .....|| .|++.+. ..+ ....+..+.+.|+|||++++.....
T Consensus 150 ~-~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 150 P-ELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp H-HHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred c-ccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 0 0013344 4555532 122 4678999999999999999986553
No 246
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.24 E-value=1e-10 Score=90.60 Aligned_cols=100 Identities=16% Similarity=0.119 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+...+.+...+...++.+|||||||+|..+..++.. ..+|+++|+++++++.+++++... ++++++++|+.+.-
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVD 109 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCC
Confidence 444444444455667789999999999999999987 569999999999999999998732 47999999997641
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHH
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 118 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~ 118 (188)
+ ....||.|+.+.+.....+.+..+.
T Consensus 110 --~-----~~~~fD~Iv~NlPy~is~pil~~lL 135 (295)
T 3gru_A 110 --L-----NKLDFNKVVANLPYQISSPITFKLI 135 (295)
T ss_dssp --G-----GGSCCSEEEEECCGGGHHHHHHHHH
T ss_pred --c-----ccCCccEEEEeCcccccHHHHHHHH
Confidence 1 1246999998865444344443333
No 247
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.22 E-value=3.5e-11 Score=96.09 Aligned_cols=98 Identities=9% Similarity=0.092 Sum_probs=77.2
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
+..+|||||||+|..+..+++.+| +.+++++|+ |++++.+++. ++++++.+|..+. + ... |
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~---~------p~~-D 263 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDG---V------PKG-D 263 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTC---C------CCC-S
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCC---C------CCC-C
Confidence 457999999999999999999987 789999999 8887766532 4799999998651 1 123 9
Q ss_pred EEEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 100 YAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 100 ~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
+|++.... .....+++++.+.|+|||.+++.+...+.
T Consensus 264 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 264 AIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp EEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99886432 22347899999999999999998877543
No 248
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.20 E-value=2.5e-11 Score=97.76 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=66.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhc--CCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKA--GVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
++.+|||+|||+|..++.+++. +.+|+++|+++.+++.|++|++.+ ++ ++++++++|+.+.++... ..+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~-----~~~ 163 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK-----TFH 163 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH-----HHC
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc-----CCC
Confidence 3789999999999999999886 569999999999999999999988 77 679999999988655431 258
Q ss_pred eeEEEEeC
Q 029780 98 FDYAFVDA 105 (188)
Q Consensus 98 ~D~i~id~ 105 (188)
||+||+|.
T Consensus 164 fDvV~lDP 171 (410)
T 3ll7_A 164 PDYIYVDP 171 (410)
T ss_dssp CSEEEECC
T ss_pred ceEEEECC
Confidence 99999984
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.20 E-value=3.9e-11 Score=96.62 Aligned_cols=116 Identities=12% Similarity=0.048 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCC---C----------------------------------CCEE
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP---E----------------------------------DGQI 48 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~---~----------------------------------~~~v 48 (188)
+..+..|-.++...++..+||.+||+|..++..|.... + ..+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 33344444444445667999999999999888775432 1 1569
Q ss_pred EEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-------cchHHHHHHHHhcc
Q 029780 49 TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLL 121 (188)
Q Consensus 49 ~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-------~~~~~~~~~~~~~L 121 (188)
+++|+++.+++.|++|+...|+.+++++.++|+.+... ..+||+|+++.+. .....+...+.+.|
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~--------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~l 338 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT--------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVY 338 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC--------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC--------CCCCCEEEECCCCccccCCchhHHHHHHHHHHHH
Confidence 99999999999999999999998889999999976421 3589999999643 22333444444444
Q ss_pred Cc--CeEEEE
Q 029780 122 KV--GGIAVY 129 (188)
Q Consensus 122 ~~--gG~lv~ 129 (188)
++ ||.+.+
T Consensus 339 k~~~g~~~~i 348 (393)
T 3k0b_A 339 KRMPTWSVYV 348 (393)
T ss_dssp HTCTTCEEEE
T ss_pred hcCCCCEEEE
Confidence 44 665544
No 250
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.20 E-value=1.4e-11 Score=90.85 Aligned_cols=95 Identities=15% Similarity=0.106 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
.++..+....++.+|||+|||+|..+..++ .+++++|+++. +++++.+|..+. + +
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~-~- 111 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P-L- 111 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-C-
T ss_pred HHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-C-
Confidence 455655555667899999999999887763 48999999987 356778887652 1 1
Q ss_pred hcccCCCceeEEEEeC--CccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 90 KYSENEGSFDYAFVDA--DKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~--~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..++||+|++.. +..+...+++.+.++|+|||.+++.+..
T Consensus 112 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 112 ----EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp ----CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ----CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 246899999874 2356678999999999999999997644
No 251
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.20 E-value=1.5e-10 Score=92.29 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=78.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.+..+|||||||+|..+..+++.+| +.+++++|+ |++++.+++ .++++++.+|..+ + + ...
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~--~-~------p~~- 260 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFK--E-V------PSG- 260 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT--C-C------CCC-
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCC--C-C------CCC-
Confidence 3467999999999999999999987 789999999 888776653 1479999999865 1 1 123
Q ss_pred eEEEEeCCc-----cchHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 99 DYAFVDADK-----DNYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 99 D~i~id~~~-----~~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
|+|++.... .....+++++.+.|+|||.+++.+...+.
T Consensus 261 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 261 DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999986422 23457899999999999999998877543
No 252
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.19 E-value=4.5e-11 Score=91.76 Aligned_cols=105 Identities=21% Similarity=0.215 Sum_probs=75.1
Q ss_pred CCCEEEEEcccchH----HHHHHHhhCCC---CCEEEEEeCCchhHHHHHHHHHh-----------------------cC
Q 029780 20 NAKKTIEIGVFTGY----SLLLTALTIPE---DGQITAIDVNRETYEIGLPIIKK-----------------------AG 69 (188)
Q Consensus 20 ~~~~vLeiG~g~G~----~~~~la~~~~~---~~~v~~iD~~~~~~~~a~~~~~~-----------------------~~ 69 (188)
++.+|+|+|||+|. .++.++..++. +.+|+++|+|+++++.|+++.-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 45556665432 35899999999999999986410 00
Q ss_pred -------CCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCC-----ccchHHHHHHHHhccCcCeEEEEe
Q 029780 70 -------VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDAD-----KDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 70 -------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~-----~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+..++.|.++|..+. .+. ..++||+|++... .......++.+.+.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~----~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYN----VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCC----CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCC----cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 013688999988652 110 0368999998642 223467889999999999999984
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.19 E-value=1.7e-11 Score=100.35 Aligned_cols=118 Identities=16% Similarity=0.124 Sum_probs=90.9
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCC------------CCCEEEEEeCCchhHHHHHHHHHhcCCC
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP------------EDGQITAIDVNRETYEIGLPIIKKAGVD 71 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~~~~ 71 (188)
|++...++|..++...++.+|+|.|||+|...+.+++.+. ...+++++|+++.++..|+.++...++.
T Consensus 155 TP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~ 234 (445)
T 2okc_A 155 TPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG 234 (445)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 5667777777777666677999999999999988887541 1358999999999999999998887775
Q ss_pred C-cEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCccc--------------------hHHHHHHHHhccCcCeEEEE
Q 029780 72 H-KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------------------YCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 72 ~-~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~--------------------~~~~~~~~~~~L~~gG~lv~ 129 (188)
. +..+.++|+.... ...+||+|+.+.+... ...++..+.++|++||.+++
T Consensus 235 ~~~~~i~~gD~l~~~--------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 235 TDRSPIVCEDSLEKE--------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp SSCCSEEECCTTTSC--------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCEeeCCCCCCc--------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 2 5778999986531 1248999998743111 13788999999999998765
No 254
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.19 E-value=1.5e-10 Score=89.91 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=69.9
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|..+..+++.++ +++|+++|.++++++.|+++++..+ ++++++++|..+....+... ...
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~--g~~ 97 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTL--GIE 97 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHT--TCS
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhc--CCC
Confidence 344677999999999999999999887 7899999999999999999998876 57999999986653222211 125
Q ss_pred ceeEEEEeCCcc
Q 029780 97 SFDYAFVDADKD 108 (188)
Q Consensus 97 ~~D~i~id~~~~ 108 (188)
+||.|++|....
T Consensus 98 ~~D~Vl~D~gvS 109 (301)
T 1m6y_A 98 KVDGILMDLGVS 109 (301)
T ss_dssp CEEEEEEECSCC
T ss_pred CCCEEEEcCccc
Confidence 899999997543
No 255
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.18 E-value=1.4e-10 Score=87.64 Aligned_cols=144 Identities=10% Similarity=-0.003 Sum_probs=99.4
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||+|||.|-.++.++...+ ..+++++|+++.+++.+++++..+|+. ..+.+.|..... ..++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~--------p~~~~ 199 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR--------LDEPA 199 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC--------CCSCC
T ss_pred CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC--------CCCCc
Confidence 5578999999999999999887655 889999999999999999999998864 677788765432 25789
Q ss_pred eEEEEeCCccch-----HHHHHHHHhccCcCeEEEEeccc-cCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCeEE
Q 029780 99 DYAFVDADKDNY-----CNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRVQL 172 (188)
Q Consensus 99 D~i~id~~~~~~-----~~~~~~~~~~L~~gG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (188)
|++++.-..+.. ...+ .+.+.|+++|++|--+.- ..| +.. + +.....+..+......++..
T Consensus 200 DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~G----rs~-------g-m~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 200 DVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQ----RSK-------G-MFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp SEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC------------------C-HHHHHHHHHHHHHHHHTCCE
T ss_pred chHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcC----CCc-------c-hhhHHHHHHHHHHHhcCCce
Confidence 999886432222 2344 778999999999876541 111 111 1 44444444444333335566
Q ss_pred EEeecCCceEEEEE
Q 029780 173 SHVALGDGITICRR 186 (188)
Q Consensus 173 ~~lp~~~G~~~~~~ 186 (188)
..+-+++-+.+..+
T Consensus 267 ~~~~~~nEl~y~i~ 280 (281)
T 3lcv_B 267 QRLEIGNELIYVIQ 280 (281)
T ss_dssp EEEEETTEEEEEEC
T ss_pred eeeeecCeeEEEec
Confidence 66777777766654
No 256
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.18 E-value=1e-10 Score=98.46 Aligned_cols=103 Identities=21% Similarity=0.219 Sum_probs=78.1
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+|||||||.|..+..||+. +.+|++||.++..++.|+......+.. ++++.++++.+..... ..++
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~-----~~~~ 134 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL-----EEGE 134 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC-----CTTS
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc-----cCCC
Confidence 457789999999999999999996 779999999999999999998877643 5999999998876543 2468
Q ss_pred eeEEEEeCCccchH-----HHHHHHHhccCcCeEEEE
Q 029780 98 FDYAFVDADKDNYC-----NYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 98 ~D~i~id~~~~~~~-----~~~~~~~~~L~~gG~lv~ 129 (188)
||+|++-...++.. ..+..+.+.|+++|...+
T Consensus 135 fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 135 FDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp CSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred ccEEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 99999875433322 112334455677664443
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.18 E-value=2.9e-11 Score=97.90 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=82.0
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
|++...+.|..++...++.+|||+|||+|..+..+++......+++++|+++.+++.| .+++++++|..+
T Consensus 23 TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 23 TPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLL 92 (421)
T ss_dssp CCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGG
T ss_pred CCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhh
Confidence 4566666666655544567999999999999999998763367999999999998766 368999999875
Q ss_pred HHHHHhhcccCCCceeEEEEeCCc--------------cc------------------hHHHHHHHHhccCcCeEEEEe
Q 029780 84 VLDQLLKYSENEGSFDYAFVDADK--------------DN------------------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~~~--------------~~------------------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.. ..++||+|+.+.+. .. +..+++.+.++|++||.+++-
T Consensus 93 ~~--------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i 163 (421)
T 2ih2_A 93 WE--------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFV 163 (421)
T ss_dssp CC--------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEE
Confidence 41 13689999996321 11 125688889999999987763
No 258
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.17 E-value=1.1e-10 Score=93.76 Aligned_cols=115 Identities=8% Similarity=0.016 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCC-------------------------------------CCEEE
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-------------------------------------DGQIT 49 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~-------------------------------------~~~v~ 49 (188)
..+..|-.++...++..++|.+||+|..++..|..... ..+++
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 34444444445556779999999999998887754321 15699
Q ss_pred EEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-------cchHHHHHHHHhccC
Q 029780 50 AIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLK 122 (188)
Q Consensus 50 ~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-------~~~~~~~~~~~~~L~ 122 (188)
++|+++.+++.|++|++..|+.+++++.++|+.+... ..+||+|+++.+. .....+...+.+.|+
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~--------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT--------NKINGVLISNPPYGERLLDDKAVDILYNEMGETFA 332 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC--------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc--------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998889999999976421 3589999999542 234455555555555
Q ss_pred c--CeEEEE
Q 029780 123 V--GGIAVY 129 (188)
Q Consensus 123 ~--gG~lv~ 129 (188)
+ ||.+.+
T Consensus 333 ~~~g~~~~i 341 (384)
T 3ldg_A 333 PLKTWSQFI 341 (384)
T ss_dssp TCTTSEEEE
T ss_pred hCCCcEEEE
Confidence 5 665444
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.16 E-value=5.2e-11 Score=95.66 Aligned_cols=113 Identities=17% Similarity=0.139 Sum_probs=80.9
Q ss_pred HHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCC-------------------------------------CCCEEEEE
Q 029780 9 GQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIP-------------------------------------EDGQITAI 51 (188)
Q Consensus 9 ~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~-------------------------------------~~~~v~~i 51 (188)
+..|-.++...++.+|||++||+|..++.+|.... ...+|+++
T Consensus 184 Aa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 263 (385)
T 3ldu_A 184 AAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGY 263 (385)
T ss_dssp HHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEE
T ss_pred HHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEE
Confidence 33333333445667999999999999888876532 12579999
Q ss_pred eCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-------cchHHHHHHHHhccCc-
Q 029780 52 DVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERLMKLLKV- 123 (188)
Q Consensus 52 D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-------~~~~~~~~~~~~~L~~- 123 (188)
|+++.+++.|++|+...++.+++++.++|+.+... ..+||+|+++.+. .....+...+.+.|++
T Consensus 264 Did~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~--------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 264 DIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS--------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp ESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC--------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc--------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999988789999999976421 3689999998653 1233444545445554
Q ss_pred -CeEEEE
Q 029780 124 -GGIAVY 129 (188)
Q Consensus 124 -gG~lv~ 129 (188)
|+.+.+
T Consensus 336 ~g~~~~i 342 (385)
T 3ldu_A 336 KNWSYYL 342 (385)
T ss_dssp BSCEEEE
T ss_pred CCCEEEE
Confidence 655443
No 260
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.15 E-value=3.8e-11 Score=95.97 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=77.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.++.+|||||||+|..+..+++..+ +.+++++|+ +++++.+++ . ++++++.+|..+ .+ ..|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~~-------~~~ 268 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA---SV-------PQG 268 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT---CC-------CCE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc---CC-------CCC
Confidence 3467999999999999999999987 789999999 888876664 1 359999999865 11 349
Q ss_pred eEEEEeCCc---cchH--HHHHHHHhccCcCeEEEEeccccC
Q 029780 99 DYAFVDADK---DNYC--NYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 99 D~i~id~~~---~~~~--~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
|+|++.... .+.. .+++++.+.|+|||.+++.+...+
T Consensus 269 D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 269 DAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred CEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999987532 2223 789999999999999999876653
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.15 E-value=1.8e-10 Score=87.51 Aligned_cols=103 Identities=10% Similarity=0.075 Sum_probs=73.7
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+...+-+...+...++.+|||||||+|..+..++.. ..+|+++|+++++++.+++++.. .++++++++|+.+.
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQF 87 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhC
Confidence 3445555555556667789999999999999999986 46999999999999999998865 34799999999875
Q ss_pred -HHHHhhcccCCCceeEEEEeCCccchHHHHHHHH
Q 029780 85 -LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 118 (188)
Q Consensus 85 -~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~ 118 (188)
++.+. ..++|| |+.+.+..-..+.+..+.
T Consensus 88 ~~~~~~----~~~~~~-vv~NlPY~is~~il~~ll 117 (255)
T 3tqs_A 88 DFSSVK----TDKPLR-VVGNLPYNISTPLLFHLF 117 (255)
T ss_dssp CGGGSC----CSSCEE-EEEECCHHHHHHHHHHHH
T ss_pred CHHHhc----cCCCeE-EEecCCcccCHHHHHHHH
Confidence 22221 124688 666654433334444443
No 262
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.14 E-value=7.8e-11 Score=93.45 Aligned_cols=99 Identities=9% Similarity=0.070 Sum_probs=78.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..+..+|||||||+|..+..+++.+| +.+++++|+ +++++.+++ . ++++++.+|..+ . ...
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~-------~p~ 246 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT---S-------IPN 246 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT---C-------CCC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC---C-------CCC
Confidence 44567999999999999999999887 789999999 988887764 1 349999999854 1 135
Q ss_pred eeEEEEeCC---ccchH--HHHHHHHhccCc---CeEEEEeccccC
Q 029780 98 FDYAFVDAD---KDNYC--NYHERLMKLLKV---GGIAVYDNTLWG 135 (188)
Q Consensus 98 ~D~i~id~~---~~~~~--~~~~~~~~~L~~---gG~lv~~~~~~~ 135 (188)
||+|++... ..+.. .+++++.+.|+| ||.+++.+...+
T Consensus 247 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 247 ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 999998742 22223 789999999999 999998877653
No 263
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.13 E-value=2.1e-09 Score=80.34 Aligned_cols=144 Identities=11% Similarity=0.038 Sum_probs=95.5
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++.+|||+|||+|-.++.+. + ..+++++|+++.+++.+++++...+ .+..+.++|..... ..+
T Consensus 102 ~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g--~~~~~~v~D~~~~~--------~~~ 167 (253)
T 3frh_A 102 SAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKD--WDFTFALQDVLCAP--------PAE 167 (253)
T ss_dssp SSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTT--CEEEEEECCTTTSC--------CCC
T ss_pred cCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcC--CCceEEEeecccCC--------CCC
Confidence 33678899999999999988877 3 7899999999999999999988877 35788888875432 146
Q ss_pred ceeEEEEeCCcc-----chHHHHHHHHhccCcCeEEEEeccc-cCccccCCCCCCCCCcccchHHHHHHHHHHhhcCCCe
Q 029780 97 SFDYAFVDADKD-----NYCNYHERLMKLLKVGGIAVYDNTL-WGGTVAVPEEQVPDHFRGSSRQAILDLNRSLADDPRV 170 (188)
Q Consensus 97 ~~D~i~id~~~~-----~~~~~~~~~~~~L~~gG~lv~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (188)
+||++++--..+ .....+ .+...|++++++|.-++- ..| +... +....+...+.......+
T Consensus 168 ~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtksl~G----r~~g--------m~~~Y~~~~e~~~~~~~~ 234 (253)
T 3frh_A 168 AGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRSLGG----RGKG--------MEANYAAWFEGGLPAEFE 234 (253)
T ss_dssp BCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC-----------------------CHHHHHHHHSCTTEE
T ss_pred CcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHHhcC----CCcc--------hhhHHHHHHHHHhhccch
Confidence 999998762111 112233 667799999988875521 111 1111 222233333333344456
Q ss_pred EEEEeecCCceEEEEEc
Q 029780 171 QLSHVALGDGITICRRI 187 (188)
Q Consensus 171 ~~~~lp~~~G~~~~~~~ 187 (188)
....+-+++-+....++
T Consensus 235 ~~~~~~~~nEl~~~i~~ 251 (253)
T 3frh_A 235 IEDKKTIGTELIYLIKK 251 (253)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred hhhheecCceEEEEEec
Confidence 66677788888777654
No 264
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.11 E-value=2.5e-10 Score=95.42 Aligned_cols=120 Identities=11% Similarity=0.022 Sum_probs=91.3
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCC-----------------CCEEEEEeCCchhHHHHHHHHH
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-----------------DGQITAIDVNRETYEIGLPIIK 66 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~-----------------~~~v~~iD~~~~~~~~a~~~~~ 66 (188)
|++...++|..++...++.+|+|.+||+|...+.++..+.. ..+++++|+++.++..|+.++.
T Consensus 153 TP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 153 TPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 56677777777776666779999999999998888765421 1379999999999999999988
Q ss_pred hcCCCC----cEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc-----------------chHHHHHHHHhccCcCe
Q 029780 67 KAGVDH----KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGG 125 (188)
Q Consensus 67 ~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~-----------------~~~~~~~~~~~~L~~gG 125 (188)
..+... +..+.++|+...... ...+||+|+.+.+.. ....++..+.+.|++||
T Consensus 233 l~gi~~~~~~~~~I~~gDtL~~~~~------~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 233 LHDIEGNLDHGGAIRLGNTLGSDGE------NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp TTTCCCBGGGTBSEEESCTTSHHHH------TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HhCCCccccccCCeEeCCCcccccc------cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 777653 277899998764322 146899999985321 12368899999999999
Q ss_pred EEEE
Q 029780 126 IAVY 129 (188)
Q Consensus 126 ~lv~ 129 (188)
.+.+
T Consensus 307 r~a~ 310 (541)
T 2ar0_A 307 RAAV 310 (541)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 265
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.11 E-value=2.6e-11 Score=92.17 Aligned_cols=84 Identities=8% Similarity=0.133 Sum_probs=66.1
Q ss_pred HHHHHcCC--CEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC--------CCCcEEEEEcchHH
Q 029780 14 MLLRLVNA--KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--------VDHKINFIESEALS 83 (188)
Q Consensus 14 ~l~~~~~~--~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--------~~~~~~~~~~d~~~ 83 (188)
..+...++ .+|||+|||+|..++.+|+. +++|+++|.++..+..++++++... +.++++++++|+.+
T Consensus 80 ~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 80 KAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp HHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred HHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 33444556 79999999999999999986 5689999999998888877765432 22479999999988
Q ss_pred HHHHHhhcccCCCceeEEEEeCC
Q 029780 84 VLDQLLKYSENEGSFDYAFVDAD 106 (188)
Q Consensus 84 ~~~~~~~~~~~~~~~D~i~id~~ 106 (188)
.++.+ ..+||+||+|..
T Consensus 157 ~L~~~------~~~fDvV~lDP~ 173 (258)
T 2oyr_A 157 ALTDI------TPRPQVVYLDPM 173 (258)
T ss_dssp HSTTC------SSCCSEEEECCC
T ss_pred HHHhC------cccCCEEEEcCC
Confidence 76554 247999999963
No 266
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.08 E-value=1.2e-09 Score=86.64 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCC-----CcEEEEEcchH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVD-----HKINFIESEAL 82 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~-----~~~~~~~~d~~ 82 (188)
...+...++...++.+|||++++.|.=|..+|...+ ++.|+++|+++..++..++++++.+.. .++.+...|+.
T Consensus 136 aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~ 214 (359)
T 4fzv_A 136 ASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 214 (359)
T ss_dssp GGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGG
T ss_pred HHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchh
Confidence 345556666777888999999999999999998765 678999999999999999999987653 46888999987
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCccc---------------------------hHHHHHHHHhccCcCeEEEEecccc
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADKDN---------------------------YCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~~~---------------------------~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
...... .+.||.|++|++.+. ...+++.++++|||||.||......
T Consensus 215 ~~~~~~------~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 215 KWGELE------GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp GHHHHS------TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred hcchhc------cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 654322 478999999964221 1356777889999999999866654
No 267
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.05 E-value=3.2e-10 Score=90.10 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=77.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..+..+|||||||+|..+..+++..+ +.+++++|+ +.+++.+++ . .+++++.+|..+ . ..+
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~---~-------~~~ 251 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK---S-------IPS 251 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT---C-------CCC
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC---C-------CCC
Confidence 34668999999999999999999987 789999999 788776653 2 359999999864 1 145
Q ss_pred eeEEEEeCC---ccc--hHHHHHHHHhccCc---CeEEEEecccc
Q 029780 98 FDYAFVDAD---KDN--YCNYHERLMKLLKV---GGIAVYDNTLW 134 (188)
Q Consensus 98 ~D~i~id~~---~~~--~~~~~~~~~~~L~~---gG~lv~~~~~~ 134 (188)
||+|++... ..+ ...+++++.+.|+| ||.+++.+...
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 999998743 223 33889999999999 99999877665
No 268
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.04 E-value=1.2e-09 Score=83.66 Aligned_cols=111 Identities=11% Similarity=-0.023 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
+...+-+...+...++ +|||||||+|..+..++.. +.+|+++|+++++++.+++++.. .+++++++|+.+.-
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYP 104 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSC
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCC
Confidence 3344444444455667 9999999999999999986 46999999999999999998752 47999999997751
Q ss_pred HHHhhcccCCCceeEEEEeCCccchHHHHHHHHhc-cCcCeEEEEe
Q 029780 86 DQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKL-LKVGGIAVYD 130 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~-L~~gG~lv~~ 130 (188)
+. +...+|.|+.+.+..-..+++..+... .-..+++++.
T Consensus 105 --~~----~~~~~~~iv~NlPy~iss~il~~ll~~~~~~~~~lm~Q 144 (271)
T 3fut_A 105 --WE----EVPQGSLLVANLPYHIATPLVTRLLKTGRFARLVFLVQ 144 (271)
T ss_dssp --GG----GSCTTEEEEEEECSSCCHHHHHHHHHHCCEEEEEEEEE
T ss_pred --hh----hccCccEEEecCcccccHHHHHHHhcCCCCCEEEEEee
Confidence 11 013689998875443334444444332 1134555553
No 269
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.02 E-value=1.5e-09 Score=81.93 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=53.4
Q ss_pred HHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 16 LRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
+...++.+|||+|||+|..+..++.. +.+++++|+++++++.+++++... ++++++++|+.+.
T Consensus 26 ~~~~~~~~VLDiG~G~G~lt~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~ 88 (244)
T 1qam_A 26 IRLNEHDNIFEIGSGKGHFTLELVQR---CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQF 88 (244)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGC
T ss_pred CCCCCCCEEEEEeCCchHHHHHHHHc---CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhC
Confidence 34456779999999999999999987 469999999999999999987542 4799999998764
No 270
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.00 E-value=7.1e-10 Score=85.64 Aligned_cols=90 Identities=13% Similarity=0.151 Sum_probs=66.7
Q ss_pred HcCCCEEEEEcccc------hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEE-EEcchHHHHHHHhh
Q 029780 18 LVNAKKTIEIGVFT------GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINF-IESEALSVLDQLLK 90 (188)
Q Consensus 18 ~~~~~~vLeiG~g~------G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~ 90 (188)
..++.+|||+|||+ |. ..+++..+++++|+++|+++. + +++++ +++|..+.. +
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------------~~v~~~i~gD~~~~~--~-- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------------SDADSTLIGDCATVH--T-- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------------CSSSEEEESCGGGCC--C--
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------------CCCEEEEECccccCC--c--
Confidence 45667999999944 66 445666665689999999998 1 25778 999986531 1
Q ss_pred cccCCCceeEEEEeCCcc--------------chHHHHHHHHhccCcCeEEEEec
Q 029780 91 YSENEGSFDYAFVDADKD--------------NYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~~~--------------~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.++||+|+++.... .....++.+.++|||||.+++..
T Consensus 121 ----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 ----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 36899999974321 13467889999999999999863
No 271
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.00 E-value=7.8e-11 Score=90.56 Aligned_cols=98 Identities=7% Similarity=-0.021 Sum_probs=68.1
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHH-HhcCCCCcEEEE--EcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 95 (188)
.++.+|||+|||+|..+..+++. ++|+++|+++ +...+++.. .......++.++ ++|+.+. ..
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~ 146 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM---------EP 146 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC---------CC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC---------CC
Confidence 35679999999999999999885 5899999998 533322210 000111268888 8888652 13
Q ss_pred CceeEEEEeCCc--cc-----h--HHHHHHHHhccCcCe--EEEEe
Q 029780 96 GSFDYAFVDADK--DN-----Y--CNYHERLMKLLKVGG--IAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~--~~-----~--~~~~~~~~~~L~~gG--~lv~~ 130 (188)
++||+|++|... .. . ...++.+.++|+||| .+++.
T Consensus 147 ~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 147 FQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 789999998531 01 1 136788889999999 88885
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.97 E-value=5.9e-10 Score=86.83 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=66.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeC----CchhHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhccc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDV----NRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSE 93 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~----~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~ 93 (188)
.++.+|||+|||+|..+..+++. ++|+++|+ ++..++.+. .+..+ .+++.++++ |..+.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l--------- 144 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI--------- 144 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS---------
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC---------
Confidence 34579999999999999999985 48999999 454332111 11111 146899988 77543
Q ss_pred CCCceeEEEEeCCcc--c----h---HHHHHHHHhccCcCeEEEEe
Q 029780 94 NEGSFDYAFVDADKD--N----Y---CNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 94 ~~~~~D~i~id~~~~--~----~---~~~~~~~~~~L~~gG~lv~~ 130 (188)
...+||+|++|.... . . ...+..+.++|+|||.+++.
T Consensus 145 ~~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 145 PPERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 136899999986431 1 1 14677788999999999984
No 273
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=1.1e-10 Score=89.33 Aligned_cols=99 Identities=11% Similarity=-0.020 Sum_probs=67.9
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHH-HhcCCCCcEEEE--EcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPII-KKAGVDHKINFI--ESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~ 95 (188)
.++.+|||+|||+|.++..+++. ++|+++|+++ +...+++.. .......++.++ ++|+.+. ..
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l---------~~ 138 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL---------PV 138 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS---------CC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC---------CC
Confidence 35679999999999999999875 5899999998 432222110 000011158888 8888652 13
Q ss_pred CceeEEEEeCCc--cc-----h--HHHHHHHHhccCcCe--EEEEec
Q 029780 96 GSFDYAFVDADK--DN-----Y--CNYHERLMKLLKVGG--IAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~--~~-----~--~~~~~~~~~~L~~gG--~lv~~~ 131 (188)
++||+|++|... .+ . ...++.+.++|+||| .+++..
T Consensus 139 ~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 139 ERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 689999998531 11 1 136788889999999 888853
No 274
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.92 E-value=6.4e-09 Score=79.94 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCC-CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
+...+-+...+...++.+|||||||+|..+..++...+. +++|+++|+++++++.++++. .++++++++|+.+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 344444444455667789999999999999999987542 245999999999999999983 24799999999874
Q ss_pred -HHHHhhcccCCCceeEEEEeCCccchHHHHHHHH
Q 029780 85 -LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 118 (188)
Q Consensus 85 -~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~ 118 (188)
++.+.+. .....+.|+.+.+..-..+++..+.
T Consensus 103 ~~~~~~~~--~~~~~~~vv~NlPY~iss~il~~ll 135 (279)
T 3uzu_A 103 DFGSIARP--GDEPSLRIIGNLPYNISSPLLFHLM 135 (279)
T ss_dssp CGGGGSCS--SSSCCEEEEEECCHHHHHHHHHHHG
T ss_pred ChhHhccc--ccCCceEEEEccCccccHHHHHHHH
Confidence 2222100 0002345666654433344444443
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.87 E-value=8.2e-10 Score=92.30 Aligned_cols=119 Identities=11% Similarity=0.102 Sum_probs=88.5
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCC--------------CCEEEEEeCCchhHHHHHHHHHhcC
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE--------------DGQITAIDVNRETYEIGLPIIKKAG 69 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~--------------~~~v~~iD~~~~~~~~a~~~~~~~~ 69 (188)
|++...++|..++...+. +|+|.+||+|...+.++..+.. ...++++|+++.++..|+.++...+
T Consensus 229 TP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 229 TPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp CCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 678888888888765443 9999999999988877654320 3589999999999999999998888
Q ss_pred CCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCccc--------------------------------hHHHHHHH
Q 029780 70 VDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN--------------------------------YCNYHERL 117 (188)
Q Consensus 70 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~--------------------------------~~~~~~~~ 117 (188)
+..++.+.++|++... .. ...+||+|+.+.+... ...++..+
T Consensus 308 i~~~i~i~~gDtL~~~-~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 308 IDFNFGKKNADSFLDD-QH-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp CCCBCCSSSCCTTTSC-SC-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred CCcccceeccchhcCc-cc-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 7765555788875421 11 1368999998743210 12588999
Q ss_pred HhccCcCeEEEE
Q 029780 118 MKLLKVGGIAVY 129 (188)
Q Consensus 118 ~~~L~~gG~lv~ 129 (188)
.+.|++||.+.+
T Consensus 382 l~~Lk~gGr~ai 393 (544)
T 3khk_A 382 LYHLAPTGSMAL 393 (544)
T ss_dssp HHTEEEEEEEEE
T ss_pred HHHhccCceEEE
Confidence 999999998554
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.87 E-value=1.4e-08 Score=76.91 Aligned_cols=111 Identities=16% Similarity=0.114 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH-
Q 029780 6 PDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV- 84 (188)
Q Consensus 6 ~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 84 (188)
+...+-+...+...++.+|||||||+|..+..++.. + ..+++++|+++++++.++++ + ..+++++++|+.+.
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCC
Confidence 333344444445556789999999999999999986 2 47999999999999999876 1 24799999999764
Q ss_pred HHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhcc--CcCeEEEEe
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLL--KVGGIAVYD 130 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L--~~gG~lv~~ 130 (188)
++.. ...+ .|+.+.+..-..+.+..+.+.. -+.+++++.
T Consensus 90 ~~~~------~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 90 FCSL------GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp GGGS------CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred hhHc------cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEEe
Confidence 2221 1233 6666655544455555554432 345566654
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.86 E-value=6.6e-09 Score=86.72 Aligned_cols=121 Identities=14% Similarity=0.080 Sum_probs=93.0
Q ss_pred CcHHHHHHHHHHHH----HcCCCEEEEEcccchHHHHHHHhhCC--CCCEEEEEeCCchhHHHHHHHHHhcCCC-CcEEE
Q 029780 4 TAPDAGQLMAMLLR----LVNAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIGLPIIKKAGVD-HKINF 76 (188)
Q Consensus 4 ~~~~~~~~l~~l~~----~~~~~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~ 76 (188)
|++...++|..++. ..++.+|+|.+||+|...+.+++.+. ....++|+|+++.++..|+.++...|.. +++.+
T Consensus 201 TP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I 280 (542)
T 3lkd_A 201 TPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFL 280 (542)
T ss_dssp CCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccce
Confidence 67888899988887 34567999999999999888888763 2568999999999999999998888875 46889
Q ss_pred EEcchHHHH-HHHhhcccCCCceeEEEEeCCcc-----------c---------------hHHHHHHHHhccC-cCeEEE
Q 029780 77 IESEALSVL-DQLLKYSENEGSFDYAFVDADKD-----------N---------------YCNYHERLMKLLK-VGGIAV 128 (188)
Q Consensus 77 ~~~d~~~~~-~~~~~~~~~~~~~D~i~id~~~~-----------~---------------~~~~~~~~~~~L~-~gG~lv 128 (188)
.++|.+..- +.. ...+||+|+.+.+.. + ...++..+.+.|+ +||.+.
T Consensus 281 ~~gDtL~~d~p~~-----~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 281 HNADTLDEDWPTQ-----EPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp EESCTTTSCSCCS-----SCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred Eecceeccccccc-----ccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 999986430 111 246899999873210 0 1247889999999 999864
Q ss_pred E
Q 029780 129 Y 129 (188)
Q Consensus 129 ~ 129 (188)
+
T Consensus 356 ~ 356 (542)
T 3lkd_A 356 I 356 (542)
T ss_dssp E
T ss_pred E
Confidence 4
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.86 E-value=1.3e-08 Score=77.16 Aligned_cols=105 Identities=12% Similarity=0.008 Sum_probs=69.0
Q ss_pred cHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 5 APDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 5 ~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
.+...+.+...+...++.+|||||||+|..+. ++. .+ ..+|+++|+++++++.+++++... ++++++++|+.+.
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTF 79 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhC
Confidence 34444444445556677799999999999999 654 22 233999999999999999876542 4799999999873
Q ss_pred -HHHHhhcccCCCceeEEEEeCCccchHHHHHHHH
Q 029780 85 -LDQLLKYSENEGSFDYAFVDADKDNYCNYHERLM 118 (188)
Q Consensus 85 -~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~ 118 (188)
++...+. .+..|.|+.+.+..-..+.+..+.
T Consensus 80 ~~~~~~~~---~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 80 NFGELAEK---MGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp CHHHHHHH---HTSCEEEEEECCTTTHHHHHHHHH
T ss_pred CHHHhhcc---cCCceEEEECCCCCccHHHHHHHH
Confidence 3332110 023567777765443344444333
No 279
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.84 E-value=1.3e-10 Score=87.66 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=74.8
Q ss_pred HHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHh
Q 029780 10 QLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLL 89 (188)
Q Consensus 10 ~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (188)
+.+...+...++.+|||+|||+|..+..++.. +.+++++|+++++++.+++++. ..++++++++|+.+.. +.
T Consensus 19 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~---~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~--~~ 90 (245)
T 1yub_A 19 NQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQ--FP 90 (245)
T ss_dssp HHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH---SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTT--CC
T ss_pred HHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh---CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcC--cc
Confidence 33333334456679999999999999999987 4699999999999999988765 2357999999987641 10
Q ss_pred hcccCCCceeEEEEeCCccc----hHH----------HH----HHHHhccCcCeEEEEe
Q 029780 90 KYSENEGSFDYAFVDADKDN----YCN----------YH----ERLMKLLKVGGIAVYD 130 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~----~~~----------~~----~~~~~~L~~gG~lv~~ 130 (188)
..++| .|+.+.+... ... .+ +.+.++|++||.+.+.
T Consensus 91 ----~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 91 ----NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp ----CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred ----cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 12568 6666642211 111 22 5577899999986653
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.83 E-value=5.8e-09 Score=89.68 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhC---CC--------------------------------------C
Q 029780 7 DAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTI---PE--------------------------------------D 45 (188)
Q Consensus 7 ~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~---~~--------------------------------------~ 45 (188)
..+..|-.++...++..++|.+||+|..++..|... ++ .
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 334444444444566789999999999988877542 11 2
Q ss_pred CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-------cchHHHHHHH-
Q 029780 46 GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK-------DNYCNYHERL- 117 (188)
Q Consensus 46 ~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~-------~~~~~~~~~~- 117 (188)
.+++++|+++++++.|++|+...|+.+.+++.++|+.+..+.. ..++||+|+++.+. .....+...+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~-----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~ 331 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL-----PKGPYGTVLSNPPYGERLDSEPALIALHSLLG 331 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC-----TTCCCCEEEECCCCCC---CCHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc-----ccCCCCEEEeCCCccccccchhHHHHHHHHHH
Confidence 5899999999999999999999999888999999997642111 12389999998542 1223333333
Q ss_pred --HhccCcCeEEEE
Q 029780 118 --MKLLKVGGIAVY 129 (188)
Q Consensus 118 --~~~L~~gG~lv~ 129 (188)
.+.+.+||.+.+
T Consensus 332 ~~lk~~~~g~~~~i 345 (703)
T 3v97_A 332 RIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHCTTCEEEE
T ss_pred HHHHhhCCCCeEEE
Confidence 344557886554
No 281
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.76 E-value=1.4e-08 Score=85.86 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=74.5
Q ss_pred CEEEEEcccchHHHHH---HHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 22 KKTIEIGVFTGYSLLL---TALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~---la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
+.|+++|||+|-.+.. .+.......+|++||-++ +...+++....+++.++|+++++|..++ ++ .++.
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev--~L------PEKV 429 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREW--VA------PEKA 429 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTC--CC------SSCE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceec--cC------Cccc
Confidence 4799999999987444 333332234799999987 6778888889999999999999999775 22 4789
Q ss_pred eEEEEeC-----CccchHHHHHHHHhccCcCeEEEE
Q 029780 99 DYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 99 D~i~id~-----~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
|+|+... ..+.....+....+.|||||.++=
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 9998652 223344667777799999999764
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.74 E-value=6.1e-08 Score=83.46 Aligned_cols=121 Identities=12% Similarity=0.047 Sum_probs=83.0
Q ss_pred CCcHHHHHHHHHHHH--Hc----CCCEEEEEcccchHHHHHHHhhCC--CCCEEEEEeCCchhHHHH--HHHHHhcCCC-
Q 029780 3 GTAPDAGQLMAMLLR--LV----NAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIG--LPIIKKAGVD- 71 (188)
Q Consensus 3 ~~~~~~~~~l~~l~~--~~----~~~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a--~~~~~~~~~~- 71 (188)
.|+++.+++|..++. .. ++.+|+|.|||+|...+.++..++ ...+++++|+++.++..| +.++....+.
T Consensus 298 YTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~Llh 377 (878)
T 3s1s_A 298 PTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVS 377 (878)
T ss_dssp SCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCB
T ss_pred cCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhc
Confidence 467888888888732 22 356999999999999999998764 135799999999999999 5554432221
Q ss_pred --CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc--------------------------------chHHHHHHH
Q 029780 72 --HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------------------------NYCNYHERL 117 (188)
Q Consensus 72 --~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~--------------------------------~~~~~~~~~ 117 (188)
+...+..+|..+.... ...+||+|+.+.+.. .+..+++.+
T Consensus 378 Gi~~~~I~~dD~L~~~~~------~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~A 451 (878)
T 3s1s_A 378 SNNAPTITGEDVCSLNPE------DFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELV 451 (878)
T ss_dssp TTBCCEEECCCGGGCCGG------GGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHH
T ss_pred CCCcceEEecchhccccc------ccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHH
Confidence 1234555665442111 136899999885320 023467788
Q ss_pred HhccCcCeEEEE
Q 029780 118 MKLLKVGGIAVY 129 (188)
Q Consensus 118 ~~~L~~gG~lv~ 129 (188)
.++|++||.+.+
T Consensus 452 l~lLKpGGrLAf 463 (878)
T 3s1s_A 452 TELVQDGTVISA 463 (878)
T ss_dssp HHHSCTTCEEEE
T ss_pred HHhcCCCcEEEE
Confidence 899999998766
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.70 E-value=3.8e-08 Score=83.48 Aligned_cols=106 Identities=10% Similarity=-0.044 Sum_probs=73.4
Q ss_pred CCEEEEEcccchHHHHHHHhhCC------------CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP------------EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~------------~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
.+.|||+|||+|-.+...+.+.. ...+|++||.++.++...+... .+++.++++++++|..++-...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHH-hcCCCCeEEEEeCchhhccccc
Confidence 45899999999998643322211 1349999999997776555544 3788889999999998863211
Q ss_pred hhcccCCCceeEEEEeC--C---ccchHHHHHHHHhccCcCeEEEE
Q 029780 89 LKYSENEGSFDYAFVDA--D---KDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~--~---~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
.. ...++.|+|+... . .+...+.++...+.|+|||.++=
T Consensus 489 ~~--~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 489 KD--RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HH--TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred cc--CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 11 0147899998763 2 23344667777789999998764
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.69 E-value=7.1e-09 Score=73.95 Aligned_cols=90 Identities=9% Similarity=0.117 Sum_probs=67.4
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.+||++|||. +++|+++++++.|+++.. .+++++++|..+.... . ...++
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~--~--~~~~~ 63 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQS--A--HKESS 63 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGG--C--CCSSC
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccc--c--CCCCC
Confidence 45678999999975 238999999999998753 2488999998654210 0 01478
Q ss_pred eeEEEEeC---Cc-cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 98 FDYAFVDA---DK-DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 98 ~D~i~id~---~~-~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
||+|++.. +. .+...+++++.++|||||.+++.+..
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 99999853 22 56688999999999999999996544
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.67 E-value=1.6e-07 Score=71.70 Aligned_cols=84 Identities=7% Similarity=0.035 Sum_probs=66.5
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
...++..++|++||.|..+..+++. +++|+++|.+|++++.+++ ++. +++++++++..++-..+... ...
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~--g~~ 88 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAAL--GVE 88 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHT--TCS
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHc--CCC
Confidence 3456779999999999999999986 6799999999999999998 643 48999999987663333222 135
Q ss_pred ceeEEEEeCCccch
Q 029780 97 SFDYAFVDADKDNY 110 (188)
Q Consensus 97 ~~D~i~id~~~~~~ 110 (188)
++|.|++|...+.+
T Consensus 89 ~vDgIL~DLGvSS~ 102 (285)
T 1wg8_A 89 RVDGILADLGVSSF 102 (285)
T ss_dssp CEEEEEEECSCCHH
T ss_pred CcCEEEeCCccccc
Confidence 79999999765554
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.65 E-value=6.1e-08 Score=74.02 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 8 AGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 8 ~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
...++..+.. .++..+||+.+|||..++.+++. +.+++.+|.+++.++..++|++. .++++++..|+...+..
T Consensus 80 l~~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~ 152 (283)
T 2oo3_A 80 FLEYISVIKQ-INLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNA 152 (283)
T ss_dssp GHHHHHHHHH-HSSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHHH-hcCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHH
Confidence 3456665555 45677999999999999998873 57999999999999999999865 35799999999888776
Q ss_pred HhhcccCCCceeEEEEeCCcc---chHHHHHHHHh--ccCcCeEEEE
Q 029780 88 LLKYSENEGSFDYAFVDADKD---NYCNYHERLMK--LLKVGGIAVY 129 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~~---~~~~~~~~~~~--~L~~gG~lv~ 129 (188)
+... ...||+||+|.+.. .+...++.+.+ .+.++|++++
T Consensus 153 l~~~---~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 153 LLPP---PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HCSC---TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred hcCC---CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 6422 34799999997543 45566665543 6678998887
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.58 E-value=4.2e-07 Score=62.51 Aligned_cols=85 Identities=9% Similarity=0.049 Sum_probs=62.2
Q ss_pred CCCEEEEEcccch-HHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 20 NAKKTIEIGVFTG-YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 20 ~~~~vLeiG~g~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
++.+|||+|||.| ..+..|++.. +..|+++|++|..+. ++++|.++-..++ -..|
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~------Y~~~ 90 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEI------YRGA 90 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHH------HTTE
T ss_pred CCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccc------cCCc
Confidence 4569999999999 6999999742 678999999998766 7777776532222 1589
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
|+|+.--++...+..+-.+.+ +-|.-+++.
T Consensus 91 DLIYsirPP~El~~~i~~lA~--~v~adliI~ 120 (153)
T 2k4m_A 91 ALIYSIRPPAEIHSSLMRVAD--AVGARLIIK 120 (153)
T ss_dssp EEEEEESCCTTTHHHHHHHHH--HHTCEEEEE
T ss_pred CEEEEcCCCHHHHHHHHHHHH--HcCCCEEEE
Confidence 999876666676666666655 445666664
No 288
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.30 E-value=1.8e-06 Score=72.00 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=87.0
Q ss_pred CcHHHHHHHHHHHHHcCCCEEEEEcccchHHHHHHHhhCCC------------CCEEEEEeCCchhHHHHHHHHHhcCCC
Q 029780 4 TAPDAGQLMAMLLRLVNAKKTIEIGVFTGYSLLLTALTIPE------------DGQITAIDVNRETYEIGLPIIKKAGVD 71 (188)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~~~vLeiG~g~G~~~~~la~~~~~------------~~~v~~iD~~~~~~~~a~~~~~~~~~~ 71 (188)
|++...++|..++...++.+|+|..||+|...+.....+.. ...++|+|+++..+..|+-++--.|..
T Consensus 201 TP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~ 280 (530)
T 3ufb_A 201 TPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE 280 (530)
T ss_dssp CCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS
T ss_pred CcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc
Confidence 67889999999988888889999999999988776654321 246999999999999999988777764
Q ss_pred CcEEEEEcchHHHH-HHHhhcccCCCceeEEEEeCCcc-------------------chHHHHHHHHhccC-------cC
Q 029780 72 HKINFIESEALSVL-DQLLKYSENEGSFDYAFVDADKD-------------------NYCNYHERLMKLLK-------VG 124 (188)
Q Consensus 72 ~~~~~~~~d~~~~~-~~~~~~~~~~~~~D~i~id~~~~-------------------~~~~~~~~~~~~L~-------~g 124 (188)
...+..+|+.... ... ....+||+|+.+.+.. ....++..+...|+ +|
T Consensus 281 -~~~I~~~dtL~~~~~~~----~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~g 355 (530)
T 3ufb_A 281 -YPRIDPENSLRFPLREM----GDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNG 355 (530)
T ss_dssp -CCEEECSCTTCSCGGGC----CGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSC
T ss_pred -cccccccccccCchhhh----cccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCC
Confidence 3467788875421 111 1135799999885321 12346777777776 68
Q ss_pred eEEEE
Q 029780 125 GIAVY 129 (188)
Q Consensus 125 G~lv~ 129 (188)
|.+.+
T Consensus 356 Gr~av 360 (530)
T 3ufb_A 356 GRAAV 360 (530)
T ss_dssp CEEEE
T ss_pred ceEEE
Confidence 86544
No 289
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.27 E-value=4.7e-06 Score=65.08 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=65.8
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++..++|..+|.|..+..+++.+.+.++|+++|.++++++.++ .+ ..+++++++++..++...+.+.+ -.++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g-~~~~ 128 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERD-LIGK 128 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTT-CTTC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcC-CCCc
Confidence 445679999999999999999998866899999999999999884 33 24689999998876644443220 0136
Q ss_pred eeEEEEeCCccc
Q 029780 98 FDYAFVDADKDN 109 (188)
Q Consensus 98 ~D~i~id~~~~~ 109 (188)
+|.|++|...+.
T Consensus 129 vDgILfDLGVSS 140 (347)
T 3tka_A 129 IDGILLDLGVSS 140 (347)
T ss_dssp EEEEEEECSCCH
T ss_pred ccEEEECCccCH
Confidence 999999965544
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.09 E-value=1.9e-05 Score=62.56 Aligned_cols=72 Identities=8% Similarity=0.172 Sum_probs=53.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..++.++||+||..|+++..+++. +++|++||+.+ +-.. +.. .++++++.+|+....+ ....
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~-l~~~----l~~---~~~V~~~~~d~~~~~~-------~~~~ 270 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP-MAQS----LMD---TGQVTWLREDGFKFRP-------TRSN 270 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC-CCHH----HHT---TTCEEEECSCTTTCCC-------CSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh-cChh----hcc---CCCeEEEeCccccccC-------CCCC
Confidence 356789999999999999999885 78999999764 2221 111 2479999999876532 2468
Q ss_pred eeEEEEeCCc
Q 029780 98 FDYAFVDADK 107 (188)
Q Consensus 98 ~D~i~id~~~ 107 (188)
+|+|++|...
T Consensus 271 ~D~vvsDm~~ 280 (375)
T 4auk_A 271 ISWMVCDMVE 280 (375)
T ss_dssp EEEEEECCSS
T ss_pred cCEEEEcCCC
Confidence 9999999644
No 291
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.00 E-value=3.1e-05 Score=59.78 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=46.3
Q ss_pred HHHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC
Q 029780 10 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG 69 (188)
Q Consensus 10 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 69 (188)
+++..++.. .++..|||++||+|..++.++.. +.+++++|+++++++.|++++....
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 344444433 46779999999999999998774 6799999999999999999987753
No 292
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.98 E-value=2.9e-06 Score=64.40 Aligned_cols=102 Identities=14% Similarity=0.148 Sum_probs=61.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
..+..+|||+|||.|.++..++...+ ...++++|+.-+........ ...+ .++..+.++. +.. .+ ..+.
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~-dv~-~l-----~~~~ 140 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKT-DIH-RL-----EPVK 140 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSC-CTT-TS-----CCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-CcCC--CCeEEEeccc-eeh-hc-----CCCC
Confidence 34556899999999999999887543 45778888764431100000 0001 1334445543 111 11 2468
Q ss_pred eeEEEEeCCcc----ch-----HHHHHHHHhccCcC-eEEEEe
Q 029780 98 FDYAFVDADKD----NY-----CNYHERLMKLLKVG-GIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~----~~-----~~~~~~~~~~L~~g-G~lv~~ 130 (188)
||+|++|..+. .. ..+++.+.+.|+|| |.+|+.
T Consensus 141 ~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 141 CDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred ccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 99999996332 11 12456677999999 999994
No 293
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.96 E-value=1.6e-05 Score=68.34 Aligned_cols=109 Identities=12% Similarity=0.048 Sum_probs=73.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-------CC----CCEEEEEeCCchhHHHHHH--------------HHHhcCC----
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-------PE----DGQITAIDVNRETYEIGLP--------------IIKKAGV---- 70 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-------~~----~~~v~~iD~~~~~~~~a~~--------------~~~~~~~---- 70 (188)
+.-+|+|+|.|+|.+.+.+.+.+ |. ..+++++|..|-..+.+++ .++.++.
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34589999999999888776643 11 1579999986644433333 2222211
Q ss_pred ------CC---cEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCccch------HHHHHHHHhccCcCeEEEEe
Q 029780 71 ------DH---KINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDNY------CNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 71 ------~~---~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~~------~~~~~~~~~~L~~gG~lv~~ 130 (188)
.+ .++++.||+.+.++++... ....+|++|+|+-.... .+++..+.+++++||.+...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDS--LNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGG--GTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccc--cCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 11 4668889999988775211 13689999999743332 68899999999999998763
No 294
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.90 E-value=3.1e-05 Score=61.24 Aligned_cols=59 Identities=7% Similarity=0.046 Sum_probs=49.8
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 84 (188)
+..|||||+|.|..|..|+.... ..+++++|+++..+...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47899999999999999998533 458999999999999888876 2 25799999999765
No 295
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.88 E-value=5.5e-06 Score=62.97 Aligned_cols=102 Identities=10% Similarity=0.004 Sum_probs=62.8
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
+.+..+|||+||+.|.++..++...+ ...++++|+.......+... .. ...++..+..+. ++ ..+ ....
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g-v~sV~GvdvG~d~~~~pi~~-~~--~g~~ii~~~~~~-dv-~~l-----~~~~ 156 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN-VKKVMAFTLGVQGHEKPIMR-TT--LGWNLIRFKDKT-DV-FNM-----EVIP 156 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCCC-CB--TTGGGEEEECSC-CG-GGS-----CCCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-CCeeeeEEeccCcccccccc-cc--CCCceEEeeCCc-ch-hhc-----CCCC
Confidence 44666999999999999999887544 56788999875532221110 00 111233333322 11 111 2578
Q ss_pred eeEEEEeCCcc----ch-----HHHHHHHHhccCcC--eEEEEe
Q 029780 98 FDYAFVDADKD----NY-----CNYHERLMKLLKVG--GIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~----~~-----~~~~~~~~~~L~~g--G~lv~~ 130 (188)
+|+|++|..+. .. ..+++.+.+.|+|| |.+|+.
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 99999996433 11 13456667899999 999986
No 296
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.81 E-value=0.00021 Score=55.19 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=66.8
Q ss_pred cCCCEEEEEcccchHHHHHHHh---hCCCCC--EEEEEeCCc--------hhHH-HHHHHHHhcCC--CCc--EEEEEcc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTAL---TIPEDG--QITAIDVNR--------ETYE-IGLPIIKKAGV--DHK--INFIESE 80 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~---~~~~~~--~v~~iD~~~--------~~~~-~a~~~~~~~~~--~~~--~~~~~~d 80 (188)
.+.-+|+|+|-|+|.+.+.... ...+.. +++++|..+ +... ..+......+. ..+ +++..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 3445899999999997644322 212243 567777532 2222 22322333211 123 4578899
Q ss_pred hHHHHHHHhhcccCCCceeEEEEeC--Cccc----hHHHHHHHHhccCcCeEEEE
Q 029780 81 ALSVLDQLLKYSENEGSFDYAFVDA--DKDN----YCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~D~i~id~--~~~~----~~~~~~~~~~~L~~gG~lv~ 129 (188)
+.+.++++. ...+|++|.|+ +..+ ..++++.+.++++|||.++.
T Consensus 175 a~~~l~~l~-----~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 175 ARKRIKEVE-----NFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHHGGGCC-----SCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhhhc-----ccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 998887762 34799999996 2222 25799999999999999985
No 297
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.62 E-value=5.3e-05 Score=58.01 Aligned_cols=100 Identities=11% Similarity=0.076 Sum_probs=60.9
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~ 97 (188)
.+..+|||+||+.|.++..+++..+ ...|+++|+.......... ....+ .+.+.+..+ |.. .+ ..+.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-v~sV~Gvdlg~~~~~~P~~-~~~~~-~~iv~~~~~~di~----~l-----~~~~ 147 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-VMSVKGYTLGIEGHEKPIH-MQTLG-WNIVKFKDKSNVF----TM-----PTEP 147 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCTT----TS-----CCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-CceeeeEEecccccccccc-ccccC-CceEEeecCceee----ec-----CCCC
Confidence 3567999999999999999997543 4578899986532110000 00001 012333222 221 11 2468
Q ss_pred eeEEEEeCCcc----ch-----HHHHHHHHhccCcC-eEEEEe
Q 029780 98 FDYAFVDADKD----NY-----CNYHERLMKLLKVG-GIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~----~~-----~~~~~~~~~~L~~g-G~lv~~ 130 (188)
+|+|++|..+. .. ..+++.+.+.|+|| |.+|+.
T Consensus 148 ~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 148 SDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred cCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 99999996433 11 23466667899999 999996
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.61 E-value=1.3e-05 Score=60.10 Aligned_cols=96 Identities=11% Similarity=0.025 Sum_probs=58.6
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCC---CCEEEEEeC--CchhHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhc
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPE---DGQITAIDV--NRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKY 91 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~---~~~v~~iD~--~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 91 (188)
+.++.+|+|+||+.|.++...+...+- .+.++++|. .|-... ..|. +-++++++ |..+.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv-~~i~~~~G~Df~~~------- 135 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGW-NIVTMKSGVDVFYK------- 135 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTG-GGEEEECSCCGGGS-------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCc-eEEEeeccCCccCC-------
Confidence 445679999999999999999886221 134444452 111000 0010 22466667 88752
Q ss_pred ccCCCceeEEEEeCCccc---------hHHHHHHHHhccCcCe-EEEEe
Q 029780 92 SENEGSFDYAFVDADKDN---------YCNYHERLMKLLKVGG-IAVYD 130 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~---------~~~~~~~~~~~L~~gG-~lv~~ 130 (188)
....+|+|++|..+.. ....++.+.+.|+||| .+++.
T Consensus 136 --~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 136 --PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp --CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred --CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 1358999999953311 1124566678999999 88875
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.60 E-value=0.00058 Score=50.65 Aligned_cols=100 Identities=10% Similarity=0.061 Sum_probs=65.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEG 96 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 96 (188)
+.+..+|+|+||+.|.++.+++.... ..+|+++|+-+.-.+.=+ .++..|. +.++|+.+ |.... ...
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~-~~~s~gw-n~v~fk~gvDv~~~---------~~~ 143 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPV-PMSTYGW-NIVKLMSGKDVFYL---------PPE 143 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCC-CCCCTTT-TSEEEECSCCGGGC---------CCC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcc-hhhhcCc-CceEEEeccceeec---------CCc
Confidence 44666999999999999998887654 468999998654321000 0112232 56999998 87332 136
Q ss_pred ceeEEEEeCCccc---------hHHHHHHHHhccCcCeEEEEe
Q 029780 97 SFDYAFVDADKDN---------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 97 ~~D~i~id~~~~~---------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.+|.|++|..+.. ....++.+.+.|++ |-+++.
T Consensus 144 ~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K 185 (267)
T 3p8z_A 144 KCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK 185 (267)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE
T ss_pred cccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE
Confidence 7999999953322 12355666688888 666663
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.59 E-value=0.00018 Score=54.44 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=45.0
Q ss_pred HHHHHHHHH--cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC
Q 029780 10 QLMAMLLRL--VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG 69 (188)
Q Consensus 10 ~~l~~l~~~--~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 69 (188)
+++..++.. .++..|||.+||+|..++...+. +.+++++|+++..++.++++++..+
T Consensus 200 ~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 345444443 46679999999999999887764 6799999999999999999987654
No 301
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.55 E-value=0.00056 Score=54.48 Aligned_cols=19 Identities=11% Similarity=0.249 Sum_probs=16.5
Q ss_pred CCEEEEEcccchHHHHHHH
Q 029780 21 AKKTIEIGVFTGYSLLLTA 39 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la 39 (188)
+.+|+|+||++|..|+.++
T Consensus 53 ~~~IaDlGCssG~Nt~~~v 71 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHII 71 (374)
T ss_dssp CEEEEEETCCSSHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHH
Confidence 4589999999999998874
No 302
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.49 E-value=0.00074 Score=57.77 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=70.9
Q ss_pred CEEEEEcccchHHHHHHHhhC-------C----CCCEEEEEeC---CchhHHHH-----------HHHHHhcCCC-----
Q 029780 22 KKTIEIGVFTGYSLLLTALTI-------P----EDGQITAIDV---NRETYEIG-----------LPIIKKAGVD----- 71 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~-------~----~~~~v~~iD~---~~~~~~~a-----------~~~~~~~~~~----- 71 (188)
-+|+|+|.|+|.+.+.....+ | ...+++++|. +++.+..+ ++.++.++..
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999877765543 1 1246999998 55544422 2333333210
Q ss_pred --------CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCccc------hHHHHHHHHhccCcCeEEEEe
Q 029780 72 --------HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKDN------YCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 72 --------~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~~------~~~~~~~~~~~L~~gG~lv~~ 130 (188)
-.+++..+|+.+.++++... ....+|++|.|+-.+. ..+++..+.+++++||.+...
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~--~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDS--LNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGG--GTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccc--cCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 13457779998888775211 1367999999973211 357889999999999998864
No 303
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.40 E-value=0.00023 Score=56.84 Aligned_cols=77 Identities=18% Similarity=0.071 Sum_probs=45.7
Q ss_pred CCEEEEEcccchHHHHHHHhh-------------C---CCCCEEEEEeCC-----------chhHHHHHHHHHhcCCCCc
Q 029780 21 AKKTIEIGVFTGYSLLLTALT-------------I---PEDGQITAIDVN-----------RETYEIGLPIIKKAGVDHK 73 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~-------------~---~~~~~v~~iD~~-----------~~~~~~a~~~~~~~~~~~~ 73 (188)
..+|+|+||++|..|+.+... . ++..+|+.-|+- |...+.+++ ..+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 468999999999999987765 1 124567777864 222222211 1221112
Q ss_pred EEEEEcchHHHHHHHhhcccCCCceeEEEEe
Q 029780 74 INFIESEALSVLDQLLKYSENEGSFDYAFVD 104 (188)
Q Consensus 74 ~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id 104 (188)
..|+.+....+..++. ..+++|+|+..
T Consensus 130 ~~f~~gvpgSFy~rlf----p~~S~d~v~Ss 156 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF----PEESMHFLHSC 156 (384)
T ss_dssp SEEEEECCSCTTSCCS----CTTCEEEEEEE
T ss_pred ceEEEecchhhhhccC----CCCceEEEEec
Confidence 3566665554444442 35899999876
No 304
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.37 E-value=0.00048 Score=49.56 Aligned_cols=101 Identities=15% Similarity=0.075 Sum_probs=62.5
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
...++++||.+|+ |.|..+..++... +.+|++++.+++..+.+++ .+....+.....+..+.+.+.. .
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~----~ 104 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELT----D 104 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCSEEEETTCSTHHHHHHHHT----T
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCEEeeCCcHHHHHHHHHHh----C
Confidence 3456789999994 5677777777653 5799999998877665543 3432111111122222222221 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|+++-... ...++.+.+.|+++|.++.-.
T Consensus 105 ~~~~D~vi~~~g----~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 105 GYGVDVVLNSLA----GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp TCCEEEEEECCC----THHHHHHHHTEEEEEEEEECS
T ss_pred CCCCeEEEECCc----hHHHHHHHHHhccCCEEEEEc
Confidence 247999986543 246788889999999998754
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.37 E-value=0.00061 Score=54.95 Aligned_cols=49 Identities=16% Similarity=0.196 Sum_probs=42.9
Q ss_pred cCCCEEEEEcccchHHHHHHH-hhCCCCCEEEEEeCCchhHHHHHHHHHh
Q 029780 19 VNAKKTIEIGVFTGYSLLLTA-LTIPEDGQITAIDVNRETYEIGLPIIKK 67 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la-~~~~~~~~v~~iD~~~~~~~~a~~~~~~ 67 (188)
.++..++|||++.|..+..++ +..++.++|+++|++|..++..+++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 567799999999999999988 4554347999999999999999999987
No 306
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.36 E-value=0.00069 Score=53.67 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=67.3
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++. |...-+.....+..+.+.+.. .
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~l----Ga~~vi~~~~~~~~~~~~~~~-----~ 256 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQL----GATHVINSKTQDPVAAIKEIT-----D 256 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHHH----TCSEEEETTTSCHHHHHHHHT-----T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHHc----CCCEEecCCccCHHHHHHHhc-----C
Confidence 455678999999875 778888888753 23799999999888877653 432111111123333333321 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+.+|+||-.... ...++.+++.|+++|.+++-..
T Consensus 257 gg~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 257 GGVNFALESTGS---PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp SCEEEEEECSCC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEeCC
Confidence 379999854322 3567888999999999987543
No 307
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.35 E-value=0.001 Score=52.06 Aligned_cols=101 Identities=13% Similarity=0.169 Sum_probs=68.3
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+|. |..++.+|+.. +.+|+++|.+++..+.+++ .|...-+.....+..+.+.+. .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~------~ 230 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKE------I 230 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH------H
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHh------C
Confidence 455778999999875 88899999876 5699999999988776654 353211111112333333321 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+.+|.+|.... ....++.+.+.|+++|.+++-..
T Consensus 231 g~~d~vid~~g---~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 231 GGAHGVLVTAV---SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SSEEEEEESSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEEeCC---CHHHHHHHHHHhccCCEEEEeCC
Confidence 48999986543 24567888899999999988543
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.31 E-value=0.00096 Score=53.43 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=68.4
Q ss_pred HHHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch-HHHHHHHhhccc
Q 029780 16 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSE 93 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~ 93 (188)
+...++.+||-+|+|. |..++.+|+... ..+|+++|.+++.++.+++ .|. +.+.....+. .+.+.++.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~---- 250 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL---- 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh----
Confidence 3456778999999876 788888988753 2399999999988776653 353 1111111232 33333332
Q ss_pred CCCceeEEEEeCCccc-----------hHHHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADKDN-----------YCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~-----------~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
....+|+||-...... ....++.+++.|+++|.+++-..
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 1247999986533221 12467888999999999886543
No 309
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.24 E-value=0.0011 Score=50.67 Aligned_cols=101 Identities=13% Similarity=0.071 Sum_probs=63.9
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCCC
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENEG 96 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~ 96 (188)
+.+...|||+||+.|.++.+++.... ..+|+++|+-..-.+.=+ .++..+. +.+.++.+ |.... ...
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~-~~~ql~w-~lV~~~~~~Dv~~l---------~~~ 159 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQ-LVQSYGW-NIVTMKSGVDVFYR---------PSE 159 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCC-CCCBTTG-GGEEEECSCCTTSS---------CCC
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcc-hhhhcCC-cceEEEeccCHhhC---------CCC
Confidence 34556999999999999998887653 457999998654211000 0011121 34778877 66332 135
Q ss_pred ceeEEEEeCCccc---------hHHHHHHHHhccCcC-eEEEEe
Q 029780 97 SFDYAFVDADKDN---------YCNYHERLMKLLKVG-GIAVYD 130 (188)
Q Consensus 97 ~~D~i~id~~~~~---------~~~~~~~~~~~L~~g-G~lv~~ 130 (188)
.+|+|++|..... ....++.+.+.|++| |-+++.
T Consensus 160 ~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K 203 (321)
T 3lkz_A 160 CCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK 203 (321)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE
Confidence 7999999953221 123556666888888 877773
No 310
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.21 E-value=0.0057 Score=47.78 Aligned_cols=104 Identities=16% Similarity=0.101 Sum_probs=69.3
Q ss_pred HHcCCCEEEEEcccch-HHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVFTG-YSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G-~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+|.+ ..+..+++... +.+|+++|.+++..+.+++ .+...-+.....|..+.+.+.. ..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t----~g 230 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT----GG 230 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT----TS
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc----CC
Confidence 4567789999999864 45666666554 6899999999987766554 3433223333445555544442 23
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..+|.++.+... ...+..+.+.|+++|.+++-..
T Consensus 231 ~g~d~~~~~~~~---~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCAVA---RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECCSC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEEeccC---cchhheeheeecCCceEEEEec
Confidence 568888876533 3467888899999999887543
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.19 E-value=0.0022 Score=50.44 Aligned_cols=106 Identities=17% Similarity=0.223 Sum_probs=68.2
Q ss_pred HHHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 16 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
+...++.+||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++. |...-+.....+..+.+.+.. .
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~~vi~~~~~~~~~~v~~~t----~ 232 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALEY----GATDIINYKNGDIVEQILKAT----D 232 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHHH----TCCEEECGGGSCHHHHHHHHT----T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHHh----CCceEEcCCCcCHHHHHHHHc----C
Confidence 4456778999999874 778888888753 23899999999887777653 432111111223333333332 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
...+|+||-.... ...++.+++.|+++|.++.-...
T Consensus 233 g~g~D~v~d~~g~---~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 233 GKGVDKVVIAGGD---VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp TCCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEeccc
Confidence 3479999854322 23577888999999999876543
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.19 E-value=0.0039 Score=49.08 Aligned_cols=102 Identities=13% Similarity=0.074 Sum_probs=67.2
Q ss_pred HHHcCCCEEEEEcccc-hHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc---hHHHHHHHhh
Q 029780 16 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLK 90 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~ 90 (188)
+...++.+||-+|+|. |..++.+|+.. +. +|+++|.+++..+.+++ .|.. .++..+ ..+....+.+
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHH
Confidence 3456778999999875 77888888875 45 89999999888776654 3532 223322 2233222221
Q ss_pred cccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 91 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
. ....+|+||-.... ...++.+++.|+++|.++.-.
T Consensus 238 ~--~~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 238 Q--LGCKPEVTIECTGA---EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp H--HTSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred H--hCCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEe
Confidence 1 02579999865432 345678889999999998754
No 313
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.10 E-value=0.0016 Score=49.93 Aligned_cols=89 Identities=13% Similarity=0.175 Sum_probs=59.0
Q ss_pred cCCCEEEEEcc------cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcc
Q 029780 19 VNAKKTIEIGV------FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS 92 (188)
Q Consensus 19 ~~~~~vLeiG~------g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 92 (188)
..+.+|||+|+ ..|.. .+.+..+.++.|+++|+.+=.. ..+ .++++|..+..
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~------- 165 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVH------- 165 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEE-------
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC--eEEEccccccc-------
Confidence 34569999996 66763 3334455446999999976331 112 45899964421
Q ss_pred cCCCceeEEEEeCCc--------c------chHHHHHHHHhccCcCeEEEEe
Q 029780 93 ENEGSFDYAFVDADK--------D------NYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 93 ~~~~~~D~i~id~~~--------~------~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..++||+|+.|..+ . -....++-+.+.|++||.+++.
T Consensus 166 -~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 166 -TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp -ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 14789999999311 1 1234556677899999999997
No 314
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.08 E-value=7.3e-05 Score=59.20 Aligned_cols=106 Identities=12% Similarity=0.111 Sum_probs=65.6
Q ss_pred CEEEEEcccchHHHHHHHhh---------------CCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH
Q 029780 22 KKTIEIGVFTGYSLLLTALT---------------IPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD 86 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~---------------~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (188)
-+|+|+||++|..|+.+... -++..+|+.-|+-......+-+.+.......+..|..+....+..
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~ 132 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYG 132 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhh
Confidence 47999999999988876654 133567888897666555554443321101123455554444333
Q ss_pred HHhhcccCCCceeEEEEeC---C----c-----------------------------cchHHHHHHHHhccCcCeEEEEe
Q 029780 87 QLLKYSENEGSFDYAFVDA---D----K-----------------------------DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 87 ~~~~~~~~~~~~D~i~id~---~----~-----------------------------~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
++. ..+++|+++... | + .+...+++...+.|+|||.+++.
T Consensus 133 rlf----p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 133 RLF----PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CCS----CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred ccC----CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 332 357999998762 1 1 01123567778999999999986
Q ss_pred c
Q 029780 131 N 131 (188)
Q Consensus 131 ~ 131 (188)
-
T Consensus 209 ~ 209 (359)
T 1m6e_X 209 I 209 (359)
T ss_dssp E
T ss_pred E
Confidence 4
No 315
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.07 E-value=0.0062 Score=47.54 Aligned_cols=106 Identities=20% Similarity=0.124 Sum_probs=69.2
Q ss_pred HHHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 16 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
....++.+||-.|+|. |..++.+|+... ...++++|.+++..+.+++ +|...-+.....+..+....+..
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~---- 226 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE---- 226 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG----
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc----
Confidence 3456778999999864 456777888764 4578899999988776665 45432222222344444444422
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
...+|+|+-.... ...++.+.+.+++||.+++....
T Consensus 227 ~~g~d~v~d~~G~---~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 227 LRFNQLILETAGV---PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp GCSSEEEEECSCS---HHHHHHHHHHCCTTCEEEECCCC
T ss_pred cCCcccccccccc---cchhhhhhheecCCeEEEEEecc
Confidence 3678888754322 45678888999999999986543
No 316
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.06 E-value=0.0028 Score=49.56 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=69.7
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+|. |..++.+|+... +.+|+++|.+++..+.+++ .|...-+.. ..+..+.+.++.. .
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~-~~~~~~~v~~~t~----g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADAAVKS-GAGAADAIRELTG----G 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-STTHHHHHHHHHG----G
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCEEEcC-CCcHHHHHHHHhC----C
Confidence 456778999999865 778888888764 6799999999988877764 353321111 1233333333321 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..+|+||-.... ...++.+.+.|+++|.+++-...
T Consensus 238 ~g~d~v~d~~G~---~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 238 QGATAVFDFVGA---QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp GCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCeEEEECCCC---HHHHHHHHHHHhcCCEEEEECCC
Confidence 479998864322 34678889999999999986543
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.05 E-value=0.0019 Score=51.18 Aligned_cols=108 Identities=12% Similarity=0.088 Sum_probs=68.8
Q ss_pred HHHHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029780 15 LLRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
.+...++.+||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ +|...-+.....|..+.+.+....
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~-- 249 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGL-- 249 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSS--
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhc--
Confidence 34566788999999875 778888888753 2389999999988777765 353211111122333333220001
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..+.+|+||-... ....++.+.+.|++||.+++-..
T Consensus 250 ~~gg~Dvvid~~G---~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 250 VPGGVDVVIECAG---VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp STTCEEEEEECSC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred cCCCCCEEEECCC---CHHHHHHHHHHhccCCEEEEEec
Confidence 1248999985432 23467888899999999988544
No 318
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.03 E-value=0.0056 Score=48.89 Aligned_cols=106 Identities=14% Similarity=0.096 Sum_probs=67.8
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc-hHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE-ALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~ 94 (188)
...++.+||-+|+|. |..++.+|+... ..+|+++|.+++.++.+++ +|. +.+.....+ ..+.+.+.. .
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~v~~~t----~ 251 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGF-EIADLSLDTPLHEQIAALL----G 251 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTC-EEEETTSSSCHHHHHHHHH----S
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCC-cEEccCCcchHHHHHHHHh----C
Confidence 455778999999865 778888998763 2389999999988877754 353 111111112 233333332 1
Q ss_pred CCceeEEEEeCCcc------------chHHHHHHHHhccCcCeEEEEecc
Q 029780 95 EGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 95 ~~~~D~i~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
...+|+||-..... .....++.+++.|++||.+++-..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 24799998543221 122467888999999999987543
No 319
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=97.02 E-value=0.027 Score=38.97 Aligned_cols=112 Identities=12% Similarity=0.126 Sum_probs=72.9
Q ss_pred HHHHHHHHcCC--CEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 11 LMAMLLRLVNA--KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 11 ~l~~l~~~~~~--~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
.|.+.+..... .-|||+|-|.|..=-.+...+| +.+|+.+|-.-.... . ..++.-.++.||+.+.++..
T Consensus 29 ~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp------~--~~P~~e~~ilGdi~~tL~~~ 99 (174)
T 3iht_A 29 CLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHP------D--STPPEAQLILGDIRETLPAT 99 (174)
T ss_dssp HHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCG------G--GCCCGGGEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCC------C--CCCchHheecccHHHHHHHH
Confidence 34444443332 3699999999999888999998 899999996432211 1 12233468999999988764
Q ss_pred hhcccCCCceeEEEEeCCccch---HHHH----HHHHhccCcCeEEEEeccc
Q 029780 89 LKYSENEGSFDYAFVDADKDNY---CNYH----ERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~~~---~~~~----~~~~~~L~~gG~lv~~~~~ 133 (188)
... -..+.-++..|....+. ..+. ..+.++|.+||++|....+
T Consensus 100 ~~r--~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 100 LER--FGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp HHH--HCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred HHh--cCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 321 04567777777432221 1222 2234799999999998777
No 320
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.02 E-value=0.0046 Score=48.79 Aligned_cols=98 Identities=15% Similarity=0.073 Sum_probs=66.8
Q ss_pred HHcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhc
Q 029780 17 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKY 91 (188)
Q Consensus 17 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~ 91 (188)
...++++||-+| .|.|..++.+|+.. +.+|++++.+++..+.+++ .|.. ..+. .+..+.+...
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~--- 227 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQE--- 227 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH---
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHh---
Confidence 456778999999 56788888888875 5699999999887776664 3432 1222 2232333332
Q ss_pred ccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 92 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
....+|++|-.... ..++.+.+.|+++|.+++-..
T Consensus 228 --~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 228 --YPEGVDVVYESVGG----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp --CTTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECCC
T ss_pred --cCCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEeC
Confidence 13579999865432 467888899999999887543
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.01 E-value=0.0088 Score=46.89 Aligned_cols=106 Identities=11% Similarity=0.070 Sum_probs=66.5
Q ss_pred HHHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhccc
Q 029780 16 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSE 93 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 93 (188)
+...++.+||-+|+|. |..++.+|+.. +.+|+++|.+++..+.+++ .|...-+.... .+..+.+.+.... .
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~-~ 236 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRS-A 236 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHH-H
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhcc-c
Confidence 3456778999999864 67788888875 5679999999988777654 35321111110 2222333222110 0
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....+|+||-.... ...++.+++.|+++|.++.-.
T Consensus 237 ~g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN---EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred cCCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 02579999865432 345677889999999998754
No 322
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.93 E-value=0.0023 Score=49.85 Aligned_cols=103 Identities=13% Similarity=0.094 Sum_probs=66.9
Q ss_pred HHHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029780 16 LRLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 16 ~~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
....++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+.+ ..|...-+.....+..+.+.+.
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~----- 214 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKRE----- 214 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHH-----
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHh-----
Confidence 34667789999997 5677888888764 5699999999887766532 2343211111112333333332
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..+.+|++|-.... ..++.+.+.|+++|.+++-..
T Consensus 215 ~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 215 CPKGIDVFFDNVGG----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp CTTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred cCCCceEEEECCCc----chHHHHHHHHhhCCEEEEEee
Confidence 13579998865432 467888999999999987543
No 323
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.91 E-value=0.0068 Score=48.56 Aligned_cols=103 Identities=7% Similarity=0.062 Sum_probs=63.5
Q ss_pred HcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhccc
Q 029780 18 LVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYSE 93 (188)
Q Consensus 18 ~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~ 93 (188)
..++.+||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++. |.. .++. .+..+.+.++.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t---- 278 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYT---- 278 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHT----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHh----
Confidence 45667899999863 677788888753 23999999999888877653 422 2222 23333333332
Q ss_pred CCCceeEEEEeCCcc--chHHHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADKD--NYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~~--~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
....+|+||-..... .....++.+++.++++|.+++-..
T Consensus 279 ~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 134799998553332 222233333355599999998643
No 324
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.91 E-value=0.0021 Score=50.29 Aligned_cols=102 Identities=15% Similarity=0.043 Sum_probs=65.3
Q ss_pred HHcCCCEEEEEccc--chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGVF--TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~g--~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
...++++||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++. |...-+.....+..+.+.++. .
T Consensus 141 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~l----ga~~~~~~~~~~~~~~~~~~~----~ 210 (340)
T 3gms_A 141 NLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRL----GAAYVIDTSTAPLYETVMELT----N 210 (340)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHH----TCSEEEETTTSCHHHHHHHHT----T
T ss_pred ccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhC----CCcEEEeCCcccHHHHHHHHh----C
Confidence 45677899999986 677788888765 57999999999988877762 432111111123333333332 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
...+|++|-...... .....+.|+++|.++.-..
T Consensus 211 ~~g~Dvvid~~g~~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 211 GIGADAAIDSIGGPD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TSCEEEEEESSCHHH----HHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCChh----HHHHHHHhcCCCEEEEEee
Confidence 357999986543222 2334589999999998654
No 325
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.90 E-value=0.017 Score=45.68 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ .|.. .++.....+...++ .
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~------~ 255 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH------L 255 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT------T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh------h
Confidence 456778999999874 77888888875 5689999999998887765 3432 22332222333332 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+|+||-...... .++.+.+.|+++|.++.-.
T Consensus 256 ~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 256 KSFDFILNTVAAPH---NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp TCEEEEEECCSSCC---CHHHHHTTEEEEEEEEECC
T ss_pred cCCCEEEECCCCHH---HHHHHHHHhccCCEEEEec
Confidence 57999986543321 3567789999999988754
No 326
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.89 E-value=0.0019 Score=50.37 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=65.2
Q ss_pred HcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcc
Q 029780 18 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYS 92 (188)
Q Consensus 18 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 92 (188)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .|.. ..+. .+..+.+.+..
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~--- 213 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKFT--- 213 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHT---
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHHh---
Confidence 456789999993 5677888888875 6799999999887776654 3422 2222 23333333332
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 214 -~~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 214 -NGKGVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp -TTSCEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred -CCCCceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 13579998865432 35677889999999998854
No 327
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.89 E-value=0.011 Score=46.47 Aligned_cols=105 Identities=10% Similarity=0.013 Sum_probs=68.5
Q ss_pred HHHcCCCEEEEEcccc-hHHHHHHHhhCCCCCE-EEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc--chHHHHHHHhhc
Q 029780 16 LRLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQ-ITAIDVNRETYEIGLPIIKKAGVDHKINFIES--EALSVLDQLLKY 91 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~~~~~~~~~~~ 91 (188)
+...++.+||-+|+|. |..++.+|+.. +.+ |+++|.+++..+.+++. . ..-+.+... +..+....+.+.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHHH
Confidence 4556778999999864 77888888875 454 99999999998888865 2 122333211 122222222211
Q ss_pred ccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 92 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.....+|+||-.... ...++.+.+.|++||.+++-.
T Consensus 248 -t~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 -FGGIEPAVALECTGV---ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp -TSSCCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECC
T ss_pred -hCCCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEc
Confidence 123579999864322 345788889999999999854
No 328
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.87 E-value=0.0021 Score=49.90 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=66.2
Q ss_pred HHcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
...++++||-+| .|.|..++.+++.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.+.. .
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~~----~ 206 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLELT----D 206 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----T
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHHh----C
Confidence 345678999998 35677888888864 5799999999988877764 2422111111123333333332 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
...+|++|-.... ..+..+.+.|+++|.+++-..
T Consensus 207 ~~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 207 GKKCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp TCCEEEEEESSCG----GGHHHHHTTEEEEEEEEECCC
T ss_pred CCCceEEEECCCh----HHHHHHHHHhcCCCEEEEEec
Confidence 3579998865433 346778899999999988643
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.86 E-value=0.0021 Score=50.80 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=67.5
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc---chHHHHHHHhhcc
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES---EALSVLDQLLKYS 92 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~ 92 (188)
...++.+||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ .|.. ..+.. +..+.+.++.
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~~--- 253 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGAD---HGINRLEEDWVERVYALT--- 253 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHH---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCC---EEEcCCcccHHHHHHHHh---
Confidence 455678999999774 77888888875 5699999999988777655 3432 22222 3333333332
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
....+|+||-.... ..++.+.+.|+++|.+++-...
T Consensus 254 -~g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 254 -GDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp -TTCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEecC
Confidence 13489999865442 2367788999999999876543
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.84 E-value=0.0072 Score=47.82 Aligned_cols=99 Identities=16% Similarity=0.308 Sum_probs=66.2
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHh
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLL 89 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~ 89 (188)
...++.+||-+|+|. |..++.+|+.. +. +|+++|.+++..+.+++ .|.. .++. .+..+.+.+..
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~ 259 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKMT 259 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHHh
Confidence 345677999999864 67788888875 45 89999999998887764 3432 1222 12333333321
Q ss_pred hcccCCCceeEEEEeCCccchHHHHHHHHhccCcC-eEEEEecc
Q 029780 90 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 132 (188)
.+.+|+||-.... ...++.+++.|+++ |.++.-..
T Consensus 260 -----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 260 -----NGGVDFSLECVGN---VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp -----TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred -----CCCCCEEEECCCC---HHHHHHHHHHhhcCCcEEEEEcC
Confidence 2479999854322 34578888999999 99887543
No 331
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.82 E-value=0.053 Score=41.95 Aligned_cols=111 Identities=8% Similarity=0.006 Sum_probs=72.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC--CCcEEEEEcchHH-HHHHHhhcccCCC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--DHKINFIESEALS-VLDQLLKYSENEG 96 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~-~~~~~~~~~~~~~ 96 (188)
.+..|+++|||.=.....+. .+.+.+++-+| .|+.+...++.+...+. ..+..++..|..+ ....+...+.+..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 45689999997666544443 23357899999 59999999998876542 3567888888765 3333322211122
Q ss_pred ceeEEEEeC-----CccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 97 SFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 97 ~~D~i~id~-----~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..=++++.+ .......+++.+...+.+|+.++++...
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 233444433 2344567888888888999999998654
No 332
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.82 E-value=0.0039 Score=48.81 Aligned_cols=98 Identities=11% Similarity=0.116 Sum_probs=65.7
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE--cchHHHHHHHhhcc
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYS 92 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~ 92 (188)
...++++||-+|+ |.|..++.+|+.. +.+|++++.+++..+.+++. |.. .++. .+..+.+.+..
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~----ga~---~v~~~~~~~~~~v~~~~--- 223 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSV----GAD---IVLPLEEGWAKAVREAT--- 223 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHH----TCS---EEEESSTTHHHHHHHHT---
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhc----CCc---EEecCchhHHHHHHHHh---
Confidence 3456789999996 5678888888875 56999999999988777753 432 1222 23333333331
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....+|++|-..... .++.+.+.|+++|.+++-.
T Consensus 224 -~~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 224 -GGAGVDMVVDPIGGP----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp -TTSCEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred -CCCCceEEEECCchh----HHHHHHHhhcCCCEEEEEE
Confidence 124799998654332 4677889999999998754
No 333
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.81 E-value=0.0054 Score=48.52 Aligned_cols=99 Identities=14% Similarity=0.266 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHhh
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLLK 90 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~~ 90 (188)
...++.+||-+|+|. |..++.+|+... ..+|+++|.+++..+.+++ +|.. .++. .+..+.+.+..
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~t- 258 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEKT- 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHHh-
Confidence 455678999999864 677888888753 2389999999998887764 3532 2222 12333333331
Q ss_pred cccCCCceeEEEEeCCccchHHHHHHHHhccCcC-eEEEEec
Q 029780 91 YSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDN 131 (188)
Q Consensus 91 ~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~ 131 (188)
.+.+|+||-.... ...++.+++.|+++ |.++.-.
T Consensus 259 ----~gg~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 ----NGGVDYAVECAGR---IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp ----TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECC
T ss_pred ----CCCCCEEEECCCC---HHHHHHHHHHHhcCCCEEEEEc
Confidence 2489999854322 34578888999999 9988754
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.80 E-value=0.0073 Score=47.81 Aligned_cols=99 Identities=18% Similarity=0.289 Sum_probs=66.0
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHh
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLL 89 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~ 89 (188)
...++.+||-+|+|. |..++.+|+.. +. +|+++|.+++..+.+++ .|.. ..+. .+..+.+.+..
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~~~ 262 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITELT 262 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHHHh
Confidence 345677999999863 67788888875 44 89999999998877754 3432 1222 12333333331
Q ss_pred hcccCCCceeEEEEeCCccchHHHHHHHHhccCcC-eEEEEecc
Q 029780 90 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 132 (188)
.+.+|+||-.... ...++.+.+.|+++ |.+++-..
T Consensus 263 -----~~g~Dvvid~~G~---~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 263 -----AGGVDYSLDCAGT---AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp -----TSCBSEEEESSCC---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred -----CCCccEEEECCCC---HHHHHHHHHHhhcCCCEEEEECC
Confidence 2479999854322 34678888999999 99987543
No 335
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.79 E-value=0.0038 Score=48.53 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=64.1
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhccc
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSE 93 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 93 (188)
...++++||-+|+ |.|..+..+++.. +.+|+++|.+++..+.+++ .+....+.... .+..+.+....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~---- 211 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ----IGFDAAFNYKTVNSLEEALKKAS---- 211 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTSCSCHHHHHHHHC----
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCcEEEecCCHHHHHHHHHHHh----
Confidence 3456789999997 5677777777764 5799999998887766633 24221111111 22333333321
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+|+++-.... ..++.+.+.|+++|.+++-.
T Consensus 212 -~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 -PDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp -TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred -CCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 2579999866432 34788889999999998754
No 336
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.78 E-value=0.00058 Score=66.17 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=53.8
Q ss_pred CCEEEEEcccchHHHHHHHhhCCC----CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPE----DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~----~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
..+|||||.|+|..+..+...+.. ...++..|+++...+.+++.++... ++.-.-|..+. ..+ ...
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~-~~~-----~~~ 1310 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANP-APG-----SLG 1310 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCC-CC---------
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----ccccccccccc-ccC-----CCC
Confidence 458999999999877776665542 2378889999999988888876532 22211111100 000 135
Q ss_pred ceeEEEEeCC---ccchHHHHHHHHhccCcCeEEEEecc
Q 029780 97 SFDYAFVDAD---KDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 97 ~~D~i~id~~---~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+||+|+.... ..+....+.++.++|+|||.+++...
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 7999997642 23456678899999999999988654
No 337
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.77 E-value=0.0034 Score=48.89 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=64.5
Q ss_pred HcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 18 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 18 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+....+.....+..+.+.+.. ..
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~----~~ 212 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREIT----GG 212 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH----TT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHh----CC
Confidence 456789999994 6778888888764 5799999999887777654 2422111111122223333322 12
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 213 ~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 213 KGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CCEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 479999865433 34678889999999988754
No 338
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.72 E-value=0.0053 Score=48.26 Aligned_cols=76 Identities=14% Similarity=0.065 Sum_probs=54.2
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 100 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 100 (188)
+.+++|+.||.|..++.+...--.-..++++|+++.+++..+.|+. ...++.+|..++...... ...+|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~----~~~~D~ 71 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFD----RLSFDM 71 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHH----HHCCSE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcC----cCCcCE
Confidence 4589999999999999988752101369999999999999998863 234678888765322110 126899
Q ss_pred EEEeCC
Q 029780 101 AFVDAD 106 (188)
Q Consensus 101 i~id~~ 106 (188)
++.+.+
T Consensus 72 l~~gpP 77 (343)
T 1g55_A 72 ILMSPP 77 (343)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 998743
No 339
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.72 E-value=0.0086 Score=47.37 Aligned_cols=99 Identities=14% Similarity=0.313 Sum_probs=65.8
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHh
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLL 89 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~ 89 (188)
...++.+||-+|+|. |..++.+|+.. +. +|+++|.+++..+.+++ .|.. .++. .+..+.+.+..
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~ 258 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEMS 258 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHHh
Confidence 345678999999864 67788888875 44 89999999998887754 3432 1222 12333333331
Q ss_pred hcccCCCceeEEEEeCCccchHHHHHHHHhccCcC-eEEEEecc
Q 029780 90 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 132 (188)
.+.+|+||-.... ...++.+.+.|+++ |.++.-..
T Consensus 259 -----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 259 -----NGGVDFSFEVIGR---LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp -----TSCBSEEEECSCC---HHHHHHHHHHBCTTTCEEEECSC
T ss_pred -----CCCCcEEEECCCC---HHHHHHHHHHhhcCCcEEEEecc
Confidence 2479999854322 34577888999999 99887543
No 340
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.69 E-value=0.0026 Score=49.39 Aligned_cols=97 Identities=12% Similarity=0.086 Sum_probs=63.6
Q ss_pred HcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcc
Q 029780 18 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYS 92 (188)
Q Consensus 18 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 92 (188)
..++++||-+| +|.|..++.+++.. +.+|++++.+++..+.+++ .+.. ..+. .+..+.+.+..
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~--- 205 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW---QVINYREEDLVERLKEIT--- 205 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHT---
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC---EEEECCCccHHHHHHHHh---
Confidence 45678999999 45677777777764 5699999999888777765 2422 1222 22222222221
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....+|++|-... ...++.+.+.|+++|.++.-.
T Consensus 206 -~~~~~D~vi~~~g----~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 -GGKKVRVVYDSVG----RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp -TTCCEEEEEECSC----GGGHHHHHHTEEEEEEEEECC
T ss_pred -CCCCceEEEECCc----hHHHHHHHHHhcCCCEEEEEe
Confidence 1247999987654 235678889999999988754
No 341
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.68 E-value=0.0081 Score=47.82 Aligned_cols=77 Identities=9% Similarity=-0.008 Sum_probs=53.8
Q ss_pred CEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH-HhhcccCCCceeE
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ-LLKYSENEGSFDY 100 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~D~ 100 (188)
.+++|+.||+|..++-+..+- -..+.++|+++.+.+..+.|+. ...++.+|..++... +.........+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 479999999999999987762 2357799999999888887752 356778887664221 2110001368999
Q ss_pred EEEeCC
Q 029780 101 AFVDAD 106 (188)
Q Consensus 101 i~id~~ 106 (188)
|+.+.+
T Consensus 75 i~ggpP 80 (376)
T 3g7u_A 75 IIGGPP 80 (376)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 998754
No 342
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.68 E-value=0.0081 Score=47.46 Aligned_cols=99 Identities=17% Similarity=0.331 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-----cchHHHHHHHh
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE-----SEALSVLDQLL 89 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-----~d~~~~~~~~~ 89 (188)
...++.+||-+|+|. |..++.+|+.. +. +|+++|.+++..+.+++. |.. .++. .+..+.+.+..
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~~~ 257 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLIEMT 257 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHHHHh
Confidence 345677999999864 67778888875 44 899999999988877642 432 1222 12333333331
Q ss_pred hcccCCCceeEEEEeCCccchHHHHHHHHhccCcC-eEEEEecc
Q 029780 90 KYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNT 132 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~~ 132 (188)
.+.+|+||-.... ...++.+++.|+++ |.++.-..
T Consensus 258 -----~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 258 -----DGGVDYSFECIGN---VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp -----TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred -----CCCCCEEEECCCc---HHHHHHHHHhhccCCcEEEEEec
Confidence 2479999854322 34578888999999 99987543
No 343
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.67 E-value=0.047 Score=42.71 Aligned_cols=116 Identities=11% Similarity=0.165 Sum_probs=75.3
Q ss_pred HHHHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcC--------------------CCCcE
Q 029780 15 LLRLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAG--------------------VDHKI 74 (188)
Q Consensus 15 l~~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~--------------------~~~~~ 74 (188)
++...+...|+.+|||.......+....+ +.+++=||. |+.++.-++.+...+ .+++.
T Consensus 92 fl~~~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 169 (334)
T 1rjd_A 92 FLVANEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRY 169 (334)
T ss_dssp HHHHCSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSE
T ss_pred HHHHCCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCce
Confidence 34445667999999999999888887544 667777777 888877777776642 13578
Q ss_pred EEEEcchHHH--HHHHhhcccCCCceeEEEEeC-----CccchHHHHHHHHhccCcCeEEEEeccc
Q 029780 75 NFIESEALSV--LDQLLKYSENEGSFDYAFVDA-----DKDNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 75 ~~~~~d~~~~--~~~~~~~~~~~~~~D~i~id~-----~~~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
.++..|..+. +..+.+...+.....+++..+ ..+....+++.+.... ++|.+++-+..
T Consensus 170 ~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 170 KLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp EEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 8898888653 333222211223456666654 3455667788887776 66666544443
No 344
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.014 Score=45.55 Aligned_cols=102 Identities=15% Similarity=0.087 Sum_probs=65.6
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEE-EcchHHHHHHHhhccc
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI-ESEALSVLDQLLKYSE 93 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~ 93 (188)
...++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+....+.+. ..+..+.+.+..
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~---- 235 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGEVFIDFTKEKDIVGAVLKAT---- 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCCEEEETTTCSCHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCceEEecCccHhHHHHHHHHh----
Confidence 3456789999998 5677777887764 5699999998887766554 3432111111 122333333321
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
.+.+|+++-.... ...++.+.+.|+++|.++.-..
T Consensus 236 -~~~~D~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 -DGGAHGVINVSVS---EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp -TSCEEEEEECSSC---HHHHHHHTTSEEEEEEEEECCC
T ss_pred -CCCCCEEEECCCc---HHHHHHHHHHHhcCCEEEEEeC
Confidence 2379999875432 3467888899999999987543
No 345
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.64 E-value=0.0054 Score=48.63 Aligned_cols=104 Identities=20% Similarity=0.283 Sum_probs=67.3
Q ss_pred HHcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEE--EcchHHHHHHHhhccc
Q 029780 17 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI--ESEALSVLDQLLKYSE 93 (188)
Q Consensus 17 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~--~~d~~~~~~~~~~~~~ 93 (188)
...++.+||-+|+| .|..++.+|+... ..+|+++|.+++.++.+++ +|...-+... ..+..+.+.++.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~~---- 260 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK----FGVNEFVNPKDHDKPIQEVIVDLT---- 260 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT----TTCCEEECGGGCSSCHHHHHHHHT----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCcEEEccccCchhHHHHHHHhc----
Confidence 34567799999986 3778888888753 2389999999998876653 4532111111 122333333331
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcC-eEEEEeccc
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVG-GIAVYDNTL 133 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~g-G~lv~~~~~ 133 (188)
.+.+|+||-.... ...++.+.+.|++| |.+++-...
T Consensus 261 -~gg~D~vid~~g~---~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 261 -DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp -TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred -CCCCCEEEECCCC---HHHHHHHHHHhhccCCEEEEEccc
Confidence 3489999864332 35678889999997 999886543
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.62 E-value=0.031 Score=43.57 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=65.8
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch-HHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~ 94 (188)
.. ++.+||-+|+|. |..++.+|+..-++.+|++++.+++..+.+++ .|.. .++.... .+....+. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~----~ 235 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLT----D 235 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHH----T
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhh----c
Confidence 45 778999999863 67778888875115689999999988877765 3422 2222211 22333332 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|+||-.... ...++.+.+.|+++|.++.-.
T Consensus 236 g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 236 GLGASIAIDLVGT---EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp TCCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCccEEEECCCC---hHHHHHHHHHhhcCCEEEEeC
Confidence 2479999865432 345788889999999988754
No 347
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.57 E-value=0.015 Score=45.39 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=65.2
Q ss_pred HHcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcc
Q 029780 17 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYS 92 (188)
Q Consensus 17 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 92 (188)
...++.+||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++ .|.. ..+. .+..+.+.+.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~---- 227 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEK---- 227 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHH----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHH----
Confidence 45677899999985 477788888875 5699999999888777654 3432 1222 2222222222
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+|++|-.... ...++.+.+.|+++|.++.-.
T Consensus 228 --~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 228 --VGGVHAAVVTAVS---KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp --HSSEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred --hCCCCEEEECCCC---HHHHHHHHHHhhcCCEEEEec
Confidence 1479999865432 345778889999999988754
No 348
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.56 E-value=0.0055 Score=48.16 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=65.9
Q ss_pred HHcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
...++++||-+| .|.|..++.+|+.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.+..
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~----- 232 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET----- 232 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH-----
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh-----
Confidence 355678999995 45677888888875 6799999999988877765 2432111111123333333332
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
...+|++|-..... .++.+.+.|+++|.++.-..
T Consensus 233 ~~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 233 GQGVDIILDMIGAA----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SSCEEEEEESCCGG----GHHHHHHTEEEEEEEEECCC
T ss_pred CCCceEEEECCCHH----HHHHHHHHhccCCEEEEEEe
Confidence 36899988654332 46778899999999887543
No 349
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.48 E-value=0.024 Score=44.28 Aligned_cols=93 Identities=16% Similarity=0.210 Sum_probs=65.0
Q ss_pred HHcCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ .|.. .++ .+.. .+ .
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~~----~~------~ 232 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVK---HFY-TDPK----QC------K 232 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCS---EEE-SSGG----GC------C
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCC---eec-CCHH----HH------h
Confidence 456778999999875 77888888875 5699999999998887764 4532 222 3321 11 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
..+|+||-..... ..++.+.+.|+++|.+++-..
T Consensus 233 ~~~D~vid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 233 EELDFIISTIPTH---YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SCEEEEEECCCSC---CCHHHHHTTEEEEEEEEECCC
T ss_pred cCCCEEEECCCcH---HHHHHHHHHHhcCCEEEEECC
Confidence 3899998543332 136778899999999998543
No 350
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.44 E-value=0.0041 Score=48.64 Aligned_cols=97 Identities=11% Similarity=0.116 Sum_probs=65.0
Q ss_pred HcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcc
Q 029780 18 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYS 92 (188)
Q Consensus 18 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~ 92 (188)
..++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+.. ..+. .+..+.+.+..
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~~~--- 231 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGAD---ETVNYTHPDWPKEVRRLT--- 231 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCS---EEEETTSTTHHHHHHHHT---
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEcCCcccHHHHHHHHh---
Confidence 456679999998 6788888888875 5699999999888877764 2422 1222 12222333321
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 232 -~~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 232 -GGKGADKVVDHTGA----LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp -TTTCEEEEEESSCS----SSHHHHHHHEEEEEEEEESS
T ss_pred -CCCCceEEEECCCH----HHHHHHHHhhccCCEEEEEe
Confidence 12479999876542 24677889999999988754
No 351
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.40 E-value=0.011 Score=46.76 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=63.7
Q ss_pred CCCEEEEEc-c-cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE--cchHHHHHHHhhcccCC
Q 029780 20 NAKKTIEIG-V-FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENE 95 (188)
Q Consensus 20 ~~~~vLeiG-~-g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~ 95 (188)
++.+||-+| + +.|..++.+|+.+. +.+|++++.+++..+.+++ .|.. .++. .+..+.+.++ ..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~~v~~~-----~~ 237 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAAEVAAL-----GL 237 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHHHHHTT-----CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHHHHHHh-----cC
Confidence 456899998 3 46788888998644 6799999999988777654 4532 1222 2222222222 24
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+.+|+||-... ....++.+++.|+++|.+++-
T Consensus 238 ~g~Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 238 GAPAFVFSTTH---TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp CCEEEEEECSC---HHHHHHHHHHHSCTTCEEEEC
T ss_pred CCceEEEECCC---chhhHHHHHHHhcCCCEEEEE
Confidence 58998875432 234678888999999999875
No 352
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.40 E-value=0.011 Score=46.30 Aligned_cols=96 Identities=11% Similarity=0.083 Sum_probs=63.6
Q ss_pred CCCEEEEEccc-chHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcccC
Q 029780 20 NAKKTIEIGVF-TGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYSEN 94 (188)
Q Consensus 20 ~~~~vLeiG~g-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~ 94 (188)
++.+||-+|+| .|..++.+|+.. +. +|++++.+++..+.+++ .|.. .++. .+..+.+.++. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~----~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK----VGAD---YVINPFEEDVVKEVMDIT----D 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHT----T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCC---EEECCCCcCHHHHHHHHc----C
Confidence 67789999985 367778888875 45 89999999888777664 2432 1222 23333333321 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|+||-.... ...++.+.+.|+++|.++.-.
T Consensus 234 g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 234 GNGVDVFLEFSGA---PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEc
Confidence 2479999865432 345778889999999988754
No 353
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.39 E-value=0.0058 Score=47.71 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=65.4
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE-cchHHHHHHHhhccc
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE-SEALSVLDQLLKYSE 93 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~ 93 (188)
...++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ ..|....+.... .+..+.+....
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~~~~d~~~~~~~~~~~~~~~---- 222 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFDDAFNYKEESDLTAALKRCF---- 222 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCSEEEETTSCSCSHHHHHHHC----
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCceEEecCCHHHHHHHHHHHh----
Confidence 3456789999996 5777888888764 5799999999887766653 234321111111 12333333331
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+|++|-.... ..++.+.+.|+++|.+++-.
T Consensus 223 -~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 223 -PNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp -TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred -CCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEEc
Confidence 2579999865432 36788889999999998754
No 354
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.37 E-value=0.015 Score=45.44 Aligned_cols=100 Identities=20% Similarity=0.192 Sum_probs=64.9
Q ss_pred HHcCCCEEEEEccc--chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhc
Q 029780 17 RLVNAKKTIEIGVF--TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKY 91 (188)
Q Consensus 17 ~~~~~~~vLeiG~g--~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~ 91 (188)
...++++||-+|+| .|..++.+++... +.+|+++|.+++..+.+++ .+.. .++. .+..+.+.++.
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~-- 236 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD---YVINASMQDPLAEIRRIT-- 236 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHT--
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC---EEecCCCccHHHHHHHHh--
Confidence 45577899999987 5566777777642 5689999999988777754 2422 1222 12222233331
Q ss_pred ccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 92 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+.+|++|-.... ...++.+.+.|+++|.++.-.
T Consensus 237 --~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 --ESKGVDAVIDLNNS---EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp --TTSCEEEEEESCCC---HHHHTTGGGGEEEEEEEEECC
T ss_pred --cCCCceEEEECCCC---HHHHHHHHHHHhcCCEEEEEC
Confidence 11479999865432 345778889999999998754
No 355
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.37 E-value=0.014 Score=46.29 Aligned_cols=102 Identities=12% Similarity=0.119 Sum_probs=64.7
Q ss_pred HcCCCEEEEEccc-chHHHHHHHhhCCCC-CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcc---hHHHHHHHhhcc
Q 029780 18 LVNAKKTIEIGVF-TGYSLLLTALTIPED-GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESE---ALSVLDQLLKYS 92 (188)
Q Consensus 18 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~-~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d---~~~~~~~~~~~~ 92 (188)
..++.+||-+|+| .|..++.+|+.. + .+|++++.+++..+.+++ .|.. .++..+ ..+....+.+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~- 262 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDI- 262 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHH-
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHc--CCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHH-
Confidence 4566799999965 467788888875 5 599999999988777663 3532 223322 22222222111
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
.....+|+||-.... ...++.+++.|+++|.++.-..
T Consensus 263 ~~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 263 THGRGADFILEATGD---SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TTTSCEEEEEECSSC---TTHHHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCcEEEECCCC---HHHHHHHHHHHhcCCEEEEEec
Confidence 012379999865432 2346778899999999987543
No 356
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.34 E-value=0.01 Score=46.63 Aligned_cols=101 Identities=16% Similarity=0.131 Sum_probs=63.6
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
+..++++||-+|+ |.|..++.+++.. +.+|++++.+++..+.+++ .+....+.....+..+.+.+.. .
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~----~ 236 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYV----G 236 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTSTTHHHHHHHHH----C
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----cCCCEEEeCCCchHHHHHHHHc----C
Confidence 3456789999996 5677777888764 5799999999887775543 3432111111112222222221 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|++|-.... ..+..+++.|+++|.+++-.
T Consensus 237 ~~~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 237 EKGIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TTCEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 2479999865422 34677889999999998754
No 357
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.31 E-value=0.028 Score=43.02 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=64.0
Q ss_pred HcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch-HHHHHHHhhcccC
Q 029780 18 LVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA-LSVLDQLLKYSEN 94 (188)
Q Consensus 18 ~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~ 94 (188)
..++++||-+|+ |.|..++.+|+.. +.+|++++.+++..+.+++ .|.. ..+..+. .+....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~------ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW------ 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh------
Confidence 456789999997 5677888888875 5699999999988877654 3432 2222222 2332222
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+|++|- ... ..++.+.+.|+++|.++.-.
T Consensus 188 -~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 188 -GGLDLVLE-VRG----KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp -TSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC-
T ss_pred -cCceEEEE-CCH----HHHHHHHHhhccCCEEEEEe
Confidence 57999987 543 24678889999999988743
No 358
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.24 E-value=0.014 Score=45.77 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=64.3
Q ss_pred HHcCC--CEEEEEcc--cchHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHH
Q 029780 17 RLVNA--KKTIEIGV--FTGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQL 88 (188)
Q Consensus 17 ~~~~~--~~vLeiG~--g~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~ 88 (188)
...++ ++||-.|+ |.|..++.+++.. +. +|++++.+++..+.+++. .|.. ..+. .+..+.+.+.
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~d~~~~~~~~~~~~~ 226 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFD---AAINYKKDNVAEQLRES 226 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCS---EEEETTTSCHHHHHHHH
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCc---eEEecCchHHHHHHHHh
Confidence 45567 89999997 5666777777764 56 999999988776655542 3432 1222 1222233222
Q ss_pred hhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 89 LKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
. .+.+|++|-.... ..++.+.+.|+++|.+++-..
T Consensus 227 ~-----~~~~d~vi~~~G~----~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 227 C-----PAGVDVYFDNVGG----NISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp C-----TTCEEEEEESCCH----HHHHHHHHTEEEEEEEEECCC
T ss_pred c-----CCCCCEEEECCCH----HHHHHHHHHhccCcEEEEECC
Confidence 1 2379999865432 567888899999999987543
No 359
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.16 E-value=0.0093 Score=46.44 Aligned_cols=69 Identities=9% Similarity=-0.010 Sum_probs=50.0
Q ss_pred HHHHHHHH--HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH
Q 029780 10 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS 83 (188)
Q Consensus 10 ~~l~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 83 (188)
+++..++. ..++..|||..||+|..+...... +.+.+++|+++...+.+++++...+.. ...+.+|+.+
T Consensus 240 ~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~ 310 (323)
T 1boo_A 240 KLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNR 310 (323)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHH
Confidence 34444444 346679999999999988887664 679999999999999999988765532 3334444443
No 360
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.16 E-value=0.033 Score=43.45 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=64.1
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
...++.+||-+|+ +.|..++.+|+.. +.+|+++ .+++..+.+++ .|... +. ...+..+.+.+.. .
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~----~ 213 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHT----A 213 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHH----T
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHh----c
Confidence 3456789999993 5678888888875 5699999 77877666654 35322 22 1223333333332 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 214 ~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 214 GQGFDLVYDTLGG----PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp TSCEEEEEESSCT----HHHHHHHHHEEEEEEEEESC
T ss_pred CCCceEEEECCCc----HHHHHHHHHHhcCCeEEEEc
Confidence 3579988854332 46778889999999998753
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.13 E-value=0.024 Score=44.47 Aligned_cols=100 Identities=8% Similarity=0.041 Sum_probs=63.2
Q ss_pred HcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 18 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 18 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
..++++||-+| .|.|..++.+++.. +.+|++++.+++..+.+++ .+...-+.....+..+.+.+.. ..
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~----~~ 229 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGAAAGFNYKKEDFSEATLKFT----KG 229 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCcEEEecCChHHHHHHHHHh----cC
Confidence 45677999998 35677777787764 6799999999888777743 2422111111122223332221 12
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+|++|-..... .+..+.+.|+++|.+++-.
T Consensus 230 ~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGGS----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCGG----GHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCch----HHHHHHHhccCCCEEEEEe
Confidence 4799998665432 3567789999999998754
No 362
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.10 E-value=0.043 Score=43.01 Aligned_cols=100 Identities=8% Similarity=0.058 Sum_probs=64.1
Q ss_pred HHHcCC------CEEEEEccc-chHHH-HHHH-hhCCCCCE-EEEEeCCch---hHHHHHHHHHhcCCCCcEEEEEcchH
Q 029780 16 LRLVNA------KKTIEIGVF-TGYSL-LLTA-LTIPEDGQ-ITAIDVNRE---TYEIGLPIIKKAGVDHKINFIESEAL 82 (188)
Q Consensus 16 ~~~~~~------~~vLeiG~g-~G~~~-~~la-~~~~~~~~-v~~iD~~~~---~~~~a~~~~~~~~~~~~~~~~~~d~~ 82 (188)
+...++ .+||-+|+| .|..+ +.+| +.. +.+ |++++.+++ ..+.+++ +|.. .+.....+..
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~ 234 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVE 234 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGG
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHH
Confidence 456677 899999974 36677 7788 754 455 999999888 7776654 3421 1211112333
Q ss_pred HHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 83 SVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 83 ~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+ +.++ . +.+|+||-.... ...++.+++.|+++|.++.-..
T Consensus 235 ~-i~~~--~----gg~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 235 D-VPDV--Y----EQMDFIYEATGF---PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp G-HHHH--S----CCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECCC
T ss_pred H-HHHh--C----CCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEEeC
Confidence 3 3333 1 389999854322 3457888899999999987543
No 363
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.09 E-value=0.014 Score=45.62 Aligned_cols=68 Identities=10% Similarity=-0.070 Sum_probs=50.9
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 100 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 100 (188)
..+++|+.||+|..++.+...- -..+.++|+++.+++..+.|+... . .+|..++.... ...+|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~------~~~~D~ 74 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKT------IPDHDI 74 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGG------SCCCSE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhh------CCCCCE
Confidence 4689999999999999887651 235888999999999999887421 1 57776643321 356999
Q ss_pred EEEe
Q 029780 101 AFVD 104 (188)
Q Consensus 101 i~id 104 (188)
|+.+
T Consensus 75 l~~g 78 (327)
T 2c7p_A 75 LCAG 78 (327)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9987
No 364
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.08 E-value=0.03 Score=43.97 Aligned_cols=99 Identities=20% Similarity=0.134 Sum_probs=64.5
Q ss_pred HHcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchH-HHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEAL-SVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~ 94 (188)
...++.+||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++ .|.. .++..... +....+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~------ 240 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY------ 240 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh------
Confidence 45677899999975 367788888865 5689999999998887765 3422 22322222 233332
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+|+||-...... ...++.+.+.|+++|.++.-.
T Consensus 241 ~~~~D~vid~~g~~~-~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSLT-DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCST-TCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCCc-HHHHHHHHHHhcCCCEEEEec
Confidence 257999986543200 123566778999999998754
No 365
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.08 E-value=0.0067 Score=45.66 Aligned_cols=52 Identities=15% Similarity=0.193 Sum_probs=39.7
Q ss_pred EEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc-----------------chHHHHHHHHhccCcCeEEEEe
Q 029780 74 INFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 74 ~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~-----------------~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.+++++|+.+.+..+. .+++|+||+|.+.. .....++.+.++|+++|.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~-----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVE-----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSC-----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhcc-----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4678999999887752 46899999996421 2245667778999999998875
No 366
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.05 E-value=0.034 Score=43.43 Aligned_cols=94 Identities=18% Similarity=0.161 Sum_probs=63.3
Q ss_pred CCCEEEEEc-c-cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE--cchHHHHHHHhhcccCC
Q 029780 20 NAKKTIEIG-V-FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--SEALSVLDQLLKYSENE 95 (188)
Q Consensus 20 ~~~~vLeiG-~-g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~ 95 (188)
++.+||-+| + +.|..++.+|+.. +.+|++++.+++..+.+++ .|.. .++. .+..+.+.+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~-----~~ 215 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGAD---IVLNHKESLLNQFKTQ-----GI 215 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCS---EEECTTSCHHHHHHHH-----TC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCc---EEEECCccHHHHHHHh-----CC
Confidence 678999984 3 4577888888865 5699999999988877776 3432 1222 2333333333 24
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..+|+||-... ....++.+.+.|+++|.++.-
T Consensus 216 ~g~Dvv~d~~g---~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 216 ELVDYVFCTFN---TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp CCEEEEEESSC---HHHHHHHHHHHEEEEEEEEES
T ss_pred CCccEEEECCC---chHHHHHHHHHhccCCEEEEE
Confidence 68998886432 245578888999999999763
No 367
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.03 E-value=0.0091 Score=46.48 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=41.1
Q ss_pred CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc-----------------chHHHHHHHHhccCcCeEEEEe
Q 029780 72 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD-----------------NYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 72 ~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~-----------------~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
+...++++|+.+.+..+ ..+++|+|++|.+.. .....+..+.++|++||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l-----~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESF-----PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGS-----CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhC-----CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 45789999998876654 246899999996421 2456778888999999998874
No 368
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.91 E-value=0.017 Score=44.93 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=43.1
Q ss_pred HHHHHHHH--HcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCc---hhHHHHHHHHHhcC
Q 029780 10 QLMAMLLR--LVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNR---ETYEIGLPIIKKAG 69 (188)
Q Consensus 10 ~~l~~l~~--~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~~ 69 (188)
+++..++. ..++..|||..||+|..+...... +.+.+++|+++ +.++.+++++...+
T Consensus 230 ~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALSHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34444443 346679999999999998887775 67999999999 99999999887655
No 369
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.90 E-value=0.051 Score=36.59 Aligned_cols=93 Identities=9% Similarity=0.037 Sum_probs=58.1
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCce
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSF 98 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 98 (188)
.+|+=+|+ |..+..+++.+. .+.+|+.+|.+++.++.+++ .+ +.++.+|+.+ .+... ....+
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a-----~i~~a 72 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLA-----HLECA 72 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHT-----TGGGC
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhc-----CcccC
Confidence 47888887 555555554442 25789999999998776654 23 5678888754 33332 12578
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
|++++..+.......+-...+.+.++..++.
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 9998865443323333344566777777665
No 370
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.84 E-value=0.017 Score=44.95 Aligned_cols=53 Identities=13% Similarity=0.112 Sum_probs=40.3
Q ss_pred cEEEE-EcchHHHHHHHhhcccCCCceeEEEEeCCcc--------------chHHHHHHHHhccCcCeEEEEe
Q 029780 73 KINFI-ESEALSVLDQLLKYSENEGSFDYAFVDADKD--------------NYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 73 ~~~~~-~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~--------------~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
...++ ++|+.+.+..+. .+++|+||+|.+.. .....+..+.++|++||.+++.
T Consensus 38 ~~~l~i~gD~l~~L~~l~-----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLP-----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSC-----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCc-----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 46777 999999887652 46899999996432 1245667778999999998885
No 371
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.77 E-value=0.034 Score=42.71 Aligned_cols=75 Identities=13% Similarity=0.067 Sum_probs=51.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCE-EEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQ-ITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~-v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
...+++|+.||.|..+..+.+.-- ... +.++|+++.+.+..+.|+. ...++.+|..++...-... .+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~---~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQE---WGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHH---TCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcc---cCCc
Confidence 445899999999999988876521 122 6899999998887777642 2356788887643321111 2579
Q ss_pred eEEEEe
Q 029780 99 DYAFVD 104 (188)
Q Consensus 99 D~i~id 104 (188)
|+++..
T Consensus 85 Dll~gg 90 (295)
T 2qrv_A 85 DLVIGG 90 (295)
T ss_dssp SEEEEC
T ss_pred CEEEec
Confidence 999876
No 372
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.62 E-value=0.017 Score=44.28 Aligned_cols=54 Identities=19% Similarity=0.131 Sum_probs=38.8
Q ss_pred CcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc---c--------------------hHHHHHHHHhccCcCeEEE
Q 029780 72 HKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD---N--------------------YCNYHERLMKLLKVGGIAV 128 (188)
Q Consensus 72 ~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~---~--------------------~~~~~~~~~~~L~~gG~lv 128 (188)
.+++++++|+.+.+..+ ..++||+|+.|.+.. . +..++.++.++|++||.++
T Consensus 20 ~~~~i~~gD~~~~l~~l-----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~ 94 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF-----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLV 94 (297)
T ss_dssp -CEEEEESCHHHHHTTS-----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhC-----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 35789999999876654 247899999995321 0 1235667789999999987
Q ss_pred Ee
Q 029780 129 YD 130 (188)
Q Consensus 129 ~~ 130 (188)
+.
T Consensus 95 i~ 96 (297)
T 2zig_A 95 IV 96 (297)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 373
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=95.58 E-value=0.12 Score=40.73 Aligned_cols=98 Identities=10% Similarity=0.084 Sum_probs=62.6
Q ss_pred cCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 19 VNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 19 ~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
.++.+||-+|+ +.|..++.+|+.. +.+|+++. +++..+.+++ +|...-+.....+..+.+.++. .+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t-----~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS----RGAEEVFDYRAPNLAQTIRTYT-----KN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH----TTCSEEEETTSTTHHHHHHHHT-----TT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH----cCCcEEEECCCchHHHHHHHHc-----cC
Confidence 56779999998 3788889999875 56888874 7777665544 4532212211233333333332 34
Q ss_pred ceeEEEEeCCccchHHHHHHHHhcc-CcCeEEEEec
Q 029780 97 SFDYAFVDADKDNYCNYHERLMKLL-KVGGIAVYDN 131 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~~~~L-~~gG~lv~~~ 131 (188)
.+|++|-.... ...++.+++.| +++|.++.-.
T Consensus 231 ~~d~v~d~~g~---~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 231 NLRYALDCITN---VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCCEEEESSCS---HHHHHHHHHHSCTTCEEEEESS
T ss_pred CccEEEECCCc---hHHHHHHHHHhhcCCCEEEEEe
Confidence 59998854322 34567788888 6999998754
No 374
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.52 E-value=0.14 Score=40.21 Aligned_cols=95 Identities=20% Similarity=0.188 Sum_probs=60.4
Q ss_pred CCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 20 NAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 20 ~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
++.+||-+|+|. |..++.+|+.. +.+|++++.+++..+.+++ ..|.. .++.....+.+.+. .+.+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~------~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAA------AGTL 252 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHT------TTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHh------hCCC
Confidence 678999999753 56777788765 5699999999887766553 33432 22222222333332 2579
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
|+||-...... .++.+.+.|+++|.++.-.
T Consensus 253 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 253 DGIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 99986543221 2355678889999988754
No 375
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.48 E-value=0.024 Score=44.18 Aligned_cols=94 Identities=14% Similarity=0.115 Sum_probs=62.1
Q ss_pred CCCEEEEEccc-chHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhcccC
Q 029780 20 NAKKTIEIGVF-TGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKYSEN 94 (188)
Q Consensus 20 ~~~~vLeiG~g-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~ 94 (188)
++.+||-+|+| .|..++.+|+.. +. +|++++.+++..+.+++. . + ..+. .+..+.+.++.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~----- 228 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVT----- 228 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHH-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhc-----
Confidence 67899999975 367778888875 55 899999998877666542 1 1 1222 23333333331
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|+||-.... ...++.+.+.|+++|.++.-.
T Consensus 229 ~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 GSGVEVLLEFSGN---EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 2579999865432 345778889999999988753
No 376
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.36 E-value=0.033 Score=45.30 Aligned_cols=101 Identities=13% Similarity=0.067 Sum_probs=64.7
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch-------------
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA------------- 81 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~------------- 81 (188)
...++.+||-+|+ +.|..++.+|+.. +.++++++.+++.++.+++ +|...-+.....|.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHH
Confidence 4456789999996 5677888888875 6789999988888777754 34321111101110
Q ss_pred ----HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 82 ----LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+.++. ....+|+||-.... ..++.+.+.|+++|.+++-.
T Consensus 299 ~~~~~~~i~~~t----~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELT----GGEDIDIVFEHPGR----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHH----TSCCEEEEEECSCH----HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHh----CCCCCcEEEEcCCc----hhHHHHHHHhhCCcEEEEEe
Confidence 12222221 13589988754322 46788889999999999854
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.17 E-value=0.1 Score=40.85 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=61.5
Q ss_pred Hc-CCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 18 LV-NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 18 ~~-~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
.. ++.+||-+|+| .|..++.+|+.. +.+|++++.+++..+.+++ ..|... ++..+..+.+.+. .
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~---vi~~~~~~~~~~~------~ 242 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGADD---YVIGSDQAKMSEL------A 242 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCSC---EEETTCHHHHHHS------T
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCce---eeccccHHHHHHh------c
Confidence 44 67899999975 356777788765 5699999999887665552 345322 2222212333332 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+.+|+||-...... .++.+.+.|+++|.++.-.
T Consensus 243 ~g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 243 DSLDYVIDTVPVHH---ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TTEEEEEECCCSCC---CSHHHHTTEEEEEEEEECS
T ss_pred CCCCEEEECCCChH---HHHHHHHHhccCCEEEEeC
Confidence 47999985433221 2456778999999998754
No 378
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=95.17 E-value=0.091 Score=41.17 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=60.2
Q ss_pred HcCC-CEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---cchHHHHHHHhhc
Q 029780 18 LVNA-KKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---SEALSVLDQLLKY 91 (188)
Q Consensus 18 ~~~~-~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~ 91 (188)
..++ .+||-+|+ +.|..++.+|+.. +.+++++..+++.....++.+..+|...-+.... .+..+.+.++..+
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~ 241 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQ 241 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhc
Confidence 4466 89999985 5677888888875 5688887765554222223334456431111111 2222233322100
Q ss_pred ccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 92 SENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
....+|+||-.... .... .+++.|+++|.++.-..
T Consensus 242 --~~~g~Dvvid~~G~---~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 242 --SGGEAKLALNCVGG---KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp --HTCCEEEEEESSCH---HHHH-HHHHTSCTTCEEEECCC
T ss_pred --cCCCceEEEECCCc---hhHH-HHHHHhccCCEEEEecC
Confidence 03579999854322 2233 66799999999987543
No 379
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.17 E-value=0.034 Score=43.03 Aligned_cols=92 Identities=9% Similarity=0.059 Sum_probs=58.9
Q ss_pred EEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc-ch-HHHHHHHhhcccCCCce
Q 029780 23 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-EA-LSVLDQLLKYSENEGSF 98 (188)
Q Consensus 23 ~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~-~~~~~~~~~~~~~~~~~ 98 (188)
+||-+|+ |.|..++.+|+.. +.++++++.+++..+.+++ .|... ++.. +. .+....+ ..+.+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~~~~~-----~~~~~ 217 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAKE---VLAREDVMAERIRPL-----DKQRW 217 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCSE---EEECC---------C-----CSCCE
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCcE---EEecCCcHHHHHHHh-----cCCcc
Confidence 7999996 6778888888875 5689999999888777754 34321 2221 11 1111221 13479
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
|++|-.... ..++.+.+.++++|.++.-..
T Consensus 218 d~vid~~g~----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 218 AAAVDPVGG----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EEEEECSTT----TTHHHHHHTEEEEEEEEECSC
T ss_pred cEEEECCcH----HHHHHHHHhhccCCEEEEEee
Confidence 998754332 246778899999999987543
No 380
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.15 E-value=0.11 Score=40.43 Aligned_cols=97 Identities=9% Similarity=-0.032 Sum_probs=58.8
Q ss_pred CEEEEE-cc-cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCcee
Q 029780 22 KKTIEI-GV-FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFD 99 (188)
Q Consensus 22 ~~vLei-G~-g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D 99 (188)
++||-. |+ |.|..++.+|+.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.+... ...+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~----~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK----AEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH----HHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc----CCCCc
Confidence 566654 33 3566777777765 5699999999998887764 34321111111233333333321 14799
Q ss_pred EEEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 100 YAFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 100 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
++|-.... ..+..+.+.|+++|.++.-..
T Consensus 236 ~vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVTG----PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSCH----HHHHHHHHHSCTTCEEEECCC
T ss_pred EEEECCCC----hhHHHHHhhhcCCCEEEEEec
Confidence 98754332 234678899999999998543
No 381
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.03 E-value=0.041 Score=43.02 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=50.5
Q ss_pred CEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEE
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 101 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i 101 (188)
.+++|+.||.|..+..+..+--....+.++|+++.+.+..+.|+.. ..++.+|..++...-.. ...+|++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~----~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK----KWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH----HTTCCEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc----cCCCCEE
Confidence 4899999999999988876521013578999999998888877632 33567787664322111 1368999
Q ss_pred EEe
Q 029780 102 FVD 104 (188)
Q Consensus 102 ~id 104 (188)
+..
T Consensus 74 ~gg 76 (333)
T 4h0n_A 74 LMS 76 (333)
T ss_dssp EEC
T ss_pred Eec
Confidence 865
No 382
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=95.02 E-value=0.12 Score=41.83 Aligned_cols=100 Identities=14% Similarity=0.040 Sum_probs=63.9
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch-------------
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA------------- 81 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~------------- 81 (188)
...++++||-+|+ |.|..++.+|+.. +.++++++.+++..+.+++ .|...-+.....+.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccch
Confidence 4556789999996 4677888888875 6789999988887776643 35332111111110
Q ss_pred -----HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 82 -----LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 82 -----~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+.+.. ...+|++|-.... ..++.+.+.|+++|.++.-.
T Consensus 291 ~~~~~~~~v~~~~-----g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKA-----GREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHH-----SSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHh-----CCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 11222221 3579998865432 35678889999999998854
No 383
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.01 E-value=0.37 Score=31.65 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=54.0
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCce
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSF 98 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 98 (188)
.+|+=+|+ |..+..++..+. .+.+|+.+|.+++..+.+++. .+ +.++.+|..+ .+... ....+
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~----~~~~~~d~~~~~~l~~~-----~~~~~ 70 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID----ALVINGDCTKIKTLEDA-----GIEDA 70 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS----SEEEESCTTSHHHHHHT-----TTTTC
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC----cEEEEcCCCCHHHHHHc-----CcccC
Confidence 57888877 666666555442 256899999988766544432 12 4556666533 22221 13578
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAV 128 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv 128 (188)
|+|++..........+..+.+.+.++-+++
T Consensus 71 d~vi~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 71 DMYIAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 999987544333334444556677764443
No 384
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=94.88 E-value=0.065 Score=41.85 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=57.1
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
...++.+||-.|+ +.|..++.+|+... ..+|++++ +++..+.++ .|...-+. ...+..+.+.++ .
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~-----~ 205 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRI-----S 205 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHH-----C
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHh-----c
Confidence 3556789999997 45778888888654 56888887 454444333 34322122 122333333333 2
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+|+||-..... .++.+++.|+++|.+++-.
T Consensus 206 ~~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 206 AEGVDIVLDCLCGD----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TTCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred CCCceEEEECCCch----hHHHHHHHhhcCCEEEEEC
Confidence 46899998553322 2367889999999998754
No 385
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.83 E-value=0.039 Score=43.01 Aligned_cols=73 Identities=14% Similarity=-0.062 Sum_probs=50.5
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEE-EEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHH-HHhhcccCCCce
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQI-TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLD-QLLKYSENEGSF 98 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v-~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~ 98 (188)
+.+++|+.||.|..+..+..+--....+ .++|+++.+.+..+.|+... ++.+|..++.. .+. ...+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-------~~~~DI~~~~~~~i~-----~~~~ 77 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-------VQVKNLDSISIKQIE-----SLNC 77 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-------CBCCCTTTCCHHHHH-----HTCC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-------cccCChhhcCHHHhc-----cCCC
Confidence 4589999999999999887752101356 79999999999988887321 45667655422 221 1368
Q ss_pred eEEEEeC
Q 029780 99 DYAFVDA 105 (188)
Q Consensus 99 D~i~id~ 105 (188)
|+++...
T Consensus 78 Dil~ggp 84 (327)
T 3qv2_A 78 NTWFMSP 84 (327)
T ss_dssp CEEEECC
T ss_pred CEEEecC
Confidence 9998764
No 386
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.53 E-value=0.43 Score=32.31 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=58.9
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCc-hhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNR-ETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 96 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~-~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 96 (188)
.++|+=+|+ |..+..+++.+. .+.+|+.+|.++ +..+..++.. ...+.++.+|+.+ .+... ...
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a-----~i~ 70 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA-----GID 70 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH-----TTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc-----Chh
Confidence 356788776 777777666552 256899999974 5444444332 1246788898754 33332 136
Q ss_pred ceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 97 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
..|+|++...............+.+.+...++.
T Consensus 71 ~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 71 RCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp TCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred hCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 789999875444434444455566666666665
No 387
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.48 E-value=0.25 Score=32.90 Aligned_cols=93 Identities=12% Similarity=0.146 Sum_probs=54.7
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 97 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 97 (188)
.++|+-+|+ |..+..+++.+. .+.+|+.+|.+++.++.+++ .+ +.++.+|..+ .+... ....
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~-----~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSL-----DLEG 70 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHS-----CCTT
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhC-----Cccc
Confidence 357888888 556665555442 25789999999987765553 12 5677888754 33332 1357
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
+|+|++..+............+.+. ...++.
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 8999886543222222333334444 444444
No 388
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.42 E-value=0.17 Score=39.92 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=60.7
Q ss_pred HcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 18 LVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 18 ~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
..++.+||-+| .+.|..++.+|+.. +.+|++++ +++..+.++ ..|.. ..+..+..+....+.+ .
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~----~ 246 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKS----L 246 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHT----S
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhh----c
Confidence 45677999998 45677888888875 56899888 666655553 34532 2222211122223321 2
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+|++|-..... ...++..++.++++|.++.-.
T Consensus 247 ~g~D~vid~~g~~--~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 247 KPFDFILDNVGGS--TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CCBSEEEESSCTT--HHHHGGGGBCSSSCCEEEESC
T ss_pred CCCCEEEECCCCh--hhhhHHHHHhhcCCcEEEEeC
Confidence 5799988553322 134567788999999998743
No 389
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.38 E-value=0.11 Score=39.90 Aligned_cols=89 Identities=13% Similarity=0.125 Sum_probs=58.6
Q ss_pred HHcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 17 RLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 17 ~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
...++.+||-+|+| .|..++.+|+.. +.+|++++ +++..+.+++ +|. -.++ .| ..++ .
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa---~~v~-~d----~~~v------~ 197 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGV---RHLY-RE----PSQV------T 197 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTE---EEEE-SS----GGGC------C
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCC---CEEE-cC----HHHh------C
Confidence 34567899999985 477888888875 56999999 8988887765 342 1222 23 1222 3
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..+|+||-..... .+..+++.|+++|.++.-
T Consensus 198 ~g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 198 QKYFAIFDAVNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp SCEEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred CCccEEEECCCch----hHHHHHHHhcCCCEEEEE
Confidence 6899988432221 235678999999998875
No 390
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.33 E-value=0.13 Score=40.71 Aligned_cols=96 Identities=11% Similarity=0.030 Sum_probs=67.1
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCC-cEEEEEcchHHHHHHHhhcccCCCce
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDH-KINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.+.+||.++.+.|..+++++.. .++++.-+--.....+.|++.+++.+ .+++...-. .+ ...|
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~------~~~~ 101 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-----DY------PQQP 101 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-----CC------CSSC
T ss_pred CCCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-----cc------ccCC
Confidence 4468999999999999998753 33555444445567788898888864 366543321 11 4689
Q ss_pred eEEEEeCCc--cchHHHHHHHHhccCcCeEEEEec
Q 029780 99 DYAFVDADK--DNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 99 D~i~id~~~--~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
|++++..++ ......+..+...|++|+.+++..
T Consensus 102 ~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 102 GVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp SEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 999987654 334556788889999999887754
No 391
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.29 E-value=0.16 Score=41.73 Aligned_cols=58 Identities=9% Similarity=-0.082 Sum_probs=43.2
Q ss_pred CEEEEEcccchHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHH
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVL 85 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 85 (188)
.+++|+.||.|..+.-+... +. .+.++|+++.+.+..+.|+.. .+...++.+|..++.
T Consensus 89 ~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~~---~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHYC---DPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSCC---CTTTCEEESCTHHHH
T ss_pred ceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhccc---CCCcceeccchhhhh
Confidence 48999999999999888764 33 488899999888877776522 123456778887654
No 392
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.26 E-value=0.28 Score=38.60 Aligned_cols=99 Identities=14% Similarity=0.146 Sum_probs=59.1
Q ss_pred cCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.++++|+-+|+| .|..++.++... +.+|+.+|.+++..+.+++.... .+.....+..+....+ ..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------~~ 230 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV-------AE 230 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH-------HT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH-------cC
Confidence 356899999985 344555566654 45999999999888777665432 2333333332332222 46
Q ss_pred eeEEEEeCCccc--hHH-HHHHHHhccCcCeEEEEec
Q 029780 98 FDYAFVDADKDN--YCN-YHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 98 ~D~i~id~~~~~--~~~-~~~~~~~~L~~gG~lv~~~ 131 (188)
+|+|+-...... ... +.+...+.+++||.++--.
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 899975432211 001 1345668899999877543
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.11 E-value=0.23 Score=39.32 Aligned_cols=99 Identities=17% Similarity=0.117 Sum_probs=57.6
Q ss_pred cCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.++++|+-+|+| .|..+...+..+ +.+|+++|.+++..+.+++.+ +. .+.....+..+. .+.. ..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l-~~~l------~~ 231 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYEL-EGAV------KR 231 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHH-HHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHH-HHHH------cC
Confidence 467899999985 244444555554 569999999998776665433 32 122222222222 2221 46
Q ss_pred eeEEEEeCCccc--h-HHHHHHHHhccCcCeEEEEec
Q 029780 98 FDYAFVDADKDN--Y-CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 98 ~D~i~id~~~~~--~-~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.|+|+....... . .-+.+...+.+++||+++--.
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 899987532111 1 111355678899999887643
No 394
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.08 E-value=0.28 Score=34.33 Aligned_cols=94 Identities=11% Similarity=0.099 Sum_probs=54.4
Q ss_pred CEEEEEcccchHHHHHHHhhCC-C-CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-E-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 97 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 97 (188)
.+|+=+|+ |..+..+++.+. . +.+|+.+|.+++..+.+++ .+ +..+.+|..+ .+... .....
T Consensus 40 ~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~----~~~~~ 105 (183)
T 3c85_A 40 AQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERI----LDTGH 105 (183)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTB----CSCCC
T ss_pred CcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhc----cCCCC
Confidence 47888886 566555555442 2 4589999999987665543 23 4456676543 22221 01357
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
+|+|++...........-...+.+.++..++.
T Consensus 106 ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 106 VKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 89999864332222222334456666777765
No 395
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.08 E-value=0.064 Score=41.30 Aligned_cols=92 Identities=11% Similarity=0.113 Sum_probs=61.0
Q ss_pred EEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029780 23 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 100 (188)
Q Consensus 23 ~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 100 (188)
+||-+|+ +.|..++.+|+.. +.+|++++.+++..+.+++ .|.. ..+.....+....+ ..+.+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~-----~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGAN---RILSRDEFAESRPL-----EKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCS---EEEEGGGSSCCCSS-----CCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCC---EEEecCCHHHHHhh-----cCCCccE
Confidence 4999986 5788888999876 5699999999998887765 3432 12221111111111 2357998
Q ss_pred EEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 101 AFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 101 i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+|-... .+.++.+++.|+++|.++.-..
T Consensus 215 v~d~~g----~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 215 AIDTVG----DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp EEESSC----HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEECCC----cHHHHHHHHHHhcCCEEEEEec
Confidence 764322 1367888999999999987543
No 396
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.08 E-value=0.12 Score=41.85 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=37.9
Q ss_pred CCEEEEEcccchHHHHHHHhhCC----CCCEEEEEeCCchhHHHHHHHHHh
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP----EDGQITAIDVNRETYEIGLPIIKK 67 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~----~~~~v~~iD~~~~~~~~a~~~~~~ 67 (188)
+.+|+|+|.|.|..+..+++.+. ...+++.||+||...+.-++.+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 57999999999998888776542 124899999999998887877764
No 397
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.01 E-value=0.11 Score=40.06 Aligned_cols=66 Identities=11% Similarity=-0.067 Sum_probs=49.0
Q ss_pred EEEEEcccchHHHHHHHhhCCCCC-EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEE
Q 029780 23 KTIEIGVFTGYSLLLTALTIPEDG-QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYA 101 (188)
Q Consensus 23 ~vLeiG~g~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i 101 (188)
+|||+.||.|..+.-+-++ +. .+.++|+++.+.+..+.|+ + -.++.+|..++... +....|++
T Consensus 2 kvidLFsG~GG~~~G~~~a---G~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~------~~~~~D~l 65 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA---GFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSD------EFPKCDGI 65 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT---TCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGG------GSCCCSEE
T ss_pred eEEEeCcCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHh------hCCcccEE
Confidence 6999999999998887664 33 5678999999998888775 2 25678888765322 13678988
Q ss_pred EEe
Q 029780 102 FVD 104 (188)
Q Consensus 102 ~id 104 (188)
+..
T Consensus 66 ~gg 68 (331)
T 3ubt_Y 66 IGG 68 (331)
T ss_dssp ECC
T ss_pred Eec
Confidence 754
No 398
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.88 E-value=0.17 Score=39.74 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=59.0
Q ss_pred CCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCc---hhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 21 AKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNR---ETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 21 ~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~---~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
+++||-+|+| .|..++.+++.. +.+|++++.++ +..+.+++ .|.. .+. ..+..+.+.+. .+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v~--~~~~~~~~~~~------~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YYN--SSNGYDKLKDS------VG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EEE--CTTCSHHHHHH------HC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-eec--hHHHHHHHHHh------CC
Confidence 7899999984 245666677654 56999999988 66665553 3421 121 11222222221 25
Q ss_pred ceeEEEEeCCccchHHHH-HHHHhccCcCeEEEEecc
Q 029780 97 SFDYAFVDADKDNYCNYH-ERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~-~~~~~~L~~gG~lv~~~~ 132 (188)
.+|+||-..... ..+ +.+.+.|+++|.++.-..
T Consensus 246 ~~d~vid~~g~~---~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 246 KFDVIIDATGAD---VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CEEEEEECCCCC---THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCEEEECCCCh---HHHHHHHHHHHhcCCEEEEEec
Confidence 799998654332 235 778899999999887543
No 399
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.84 E-value=0.8 Score=37.05 Aligned_cols=103 Identities=13% Similarity=0.175 Sum_probs=60.0
Q ss_pred HHcCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHH------------HHhcCCCCcEEEEEcchHHH
Q 029780 17 RLVNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPI------------IKKAGVDHKINFIESEALSV 84 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~------------~~~~~~~~~~~~~~~d~~~~ 84 (188)
+..+-.+|--||+ |+.+..+|..+..+.+|+++|.+++.++..++. +.. + ..++.+ ..|..+.
T Consensus 32 r~~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~-~~~l~~-ttd~~ea 106 (432)
T 3pid_A 32 RGSEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K-PLNFRA-TTDKHDA 106 (432)
T ss_dssp ---CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEE-ESCHHHH
T ss_pred cccCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c-cCCeEE-EcCHHHH
Confidence 3444457888887 555555554443367899999999988766542 111 0 112332 2333222
Q ss_pred HHHHhhcccCCCceeEEEEeCCcc-----------chHHHHHHHHhccCcCeEEEEeccccC
Q 029780 85 LDQLLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTLWG 135 (188)
Q Consensus 85 ~~~~~~~~~~~~~~D~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~~~ 135 (188)
+ ...|+||+..+.. ......+.+.+ |++|.++|.......
T Consensus 107 ~----------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~p 157 (432)
T 3pid_A 107 Y----------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPV 157 (432)
T ss_dssp H----------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCT
T ss_pred H----------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCCh
Confidence 1 4578998864322 24556677778 999988887655543
No 400
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.81 E-value=0.32 Score=35.08 Aligned_cols=93 Identities=17% Similarity=0.075 Sum_probs=58.2
Q ss_pred EEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCcee
Q 029780 23 KTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSFD 99 (188)
Q Consensus 23 ~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~D 99 (188)
+|+=+|+ |..+..+++.+. .+..|+.+|.+++.++...+. . ...++.+|+.+ .+... .....|
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a-----~i~~ad 67 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDA-----EVSKND 67 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHH-----TCCTTC
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhc-----CcccCC
Confidence 4666675 777777776552 257899999999877654432 2 25678888765 33332 136789
Q ss_pred EEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 100 YAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 100 ~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
++++..........+....+.+.+...++.
T Consensus 68 ~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 68 VVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 999875544444444555555556666665
No 401
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.73 E-value=1 Score=32.75 Aligned_cols=95 Identities=11% Similarity=0.047 Sum_probs=60.2
Q ss_pred CCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 97 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 97 (188)
..++++=+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.+|+.+ .+... ....
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a-----~i~~ 71 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA-----NVRG 71 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT-----TCTT
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc-----Ccch
Confidence 3457888887 7888888888753333899999988765443 1 36788998764 33322 1357
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.|.|++..+............+.+.++..++..
T Consensus 72 ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 72 ARAVIVDLESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred hcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 899998654433333444455667777666653
No 402
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=93.62 E-value=0.29 Score=38.32 Aligned_cols=101 Identities=13% Similarity=0.091 Sum_probs=60.7
Q ss_pred HHHcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEc-c-hHHHHHHHhhcc
Q 029780 16 LRLVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIES-E-ALSVLDQLLKYS 92 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d-~~~~~~~~~~~~ 92 (188)
+...++.+||-+|+| .|..++.+|+... +.+|+++|.+++..+.+++ .|.. .++.. + ..+.+.++.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~v~~~~--- 250 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGAD---HVVDARRDPVKQVMELT--- 250 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTCS---EEEETTSCHHHHHHHHT---
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCCC---EEEeccchHHHHHHHHh---
Confidence 345577899999975 3456677887752 5689999999888777653 3532 22221 1 223333331
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
....+|+||-...... ...++.+.+. ++|.++.-.
T Consensus 251 -~g~g~Dvvid~~G~~~-~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 251 -RGRGVNVAMDFVGSQA-TVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp -TTCCEEEEEESSCCHH-HHHHGGGGEE--EEEEEEECC
T ss_pred -CCCCCcEEEECCCCch-HHHHHHHhhc--CCCEEEEEe
Confidence 1237999985432211 0145666666 899888754
No 403
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.55 E-value=0.22 Score=40.07 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=61.3
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 97 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 97 (188)
..+|+=+|+ |..+..+++.+. .+..|+.||.+++.++.+++ .+ +.++.+|+.+ .+... ....
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~a-----gi~~ 68 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESA-----GAAK 68 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHT-----TTTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhc-----CCCc
Confidence 346888887 555555555442 25789999999998887664 23 4578888765 34332 2367
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
.|+|++..+.......+-...+.+.|+..+++
T Consensus 69 A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 69 AEVLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp CSEEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCEEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 89998876544434444555677778876665
No 404
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.55 E-value=0.52 Score=37.13 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=56.7
Q ss_pred cCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.++++|+-+|+| .|..+...+... +.+|+.+|.+++..+.+++.+ +. .+.....+..+. .+.. ..
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l-~~~~------~~ 229 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANI-KKSV------QH 229 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHH-HHHH------HH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHH-HHHH------hC
Confidence 456899999984 233444444443 569999999988766555432 32 233333333222 2221 46
Q ss_pred eeEEEEeCCccc--hHH-HHHHHHhccCcCeEEEEec
Q 029780 98 FDYAFVDADKDN--YCN-YHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 98 ~D~i~id~~~~~--~~~-~~~~~~~~L~~gG~lv~~~ 131 (188)
.|+|+....... ... +.+.+.+.+++||.++.-.
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 899986543221 111 2456678899999877644
No 405
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.43 E-value=0.81 Score=33.95 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=46.9
Q ss_pred CCCEEEEEcccc-hHH-HHHHHhhCCCCCEEEEEeCCc-------------------hhHHHHHHHHHhcCCCCcEEEEE
Q 029780 20 NAKKTIEIGVFT-GYS-LLLTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 78 (188)
Q Consensus 20 ~~~~vLeiG~g~-G~~-~~~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~ 78 (188)
+..+|+-+|+|. |.. +..|+.. . -++++.+|.+. ...+.+.+.+...+-.-+++.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~-G-v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASA-G-VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHc-C-CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 456899999962 332 2223333 1 36999999987 66677777776654223455555
Q ss_pred cchHH-HHHHHhhcccCCCceeEEEEeCCc
Q 029780 79 SEALS-VLDQLLKYSENEGSFDYAFVDADK 107 (188)
Q Consensus 79 ~d~~~-~~~~~~~~~~~~~~~D~i~id~~~ 107 (188)
.+..+ .+.++. ..+|+|+...+.
T Consensus 108 ~~~~~~~~~~~~------~~~DvVi~~~d~ 131 (249)
T 1jw9_B 108 ALLDDAELAALI------AEHDLVLDCTDN 131 (249)
T ss_dssp SCCCHHHHHHHH------HTSSEEEECCSS
T ss_pred ccCCHhHHHHHH------hCCCEEEEeCCC
Confidence 43322 223332 579999876543
No 406
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.39 E-value=0.58 Score=35.86 Aligned_cols=95 Identities=11% Similarity=-0.002 Sum_probs=60.3
Q ss_pred HHHcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH-HHHHHhhcc
Q 029780 16 LRLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS-VLDQLLKYS 92 (188)
Q Consensus 16 ~~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~ 92 (188)
+...++.+||-+| .+.|..++.+|+.. +.++++++ +++..+.++ +.|.. ..+.....+ ....
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~----~lGa~---~~i~~~~~~~~~~~----- 212 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLK----ALGAE---QCINYHEEDFLLAI----- 212 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHH----HHTCS---EEEETTTSCHHHHC-----
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHH----HcCCC---EEEeCCCcchhhhh-----
Confidence 4566778999986 44688888899875 56888887 444444444 34543 233322222 2222
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
...+|+||-.... ..+..+++.|+++|.++.-.
T Consensus 213 --~~g~D~v~d~~g~----~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 213 --STPVDAVIDLVGG----DVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp --CSCEEEEEESSCH----HHHHHHGGGEEEEEEEEECC
T ss_pred --ccCCCEEEECCCc----HHHHHHHHhccCCCEEEEeC
Confidence 3679988854322 22377889999999998753
No 407
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.26 E-value=0.53 Score=31.95 Aligned_cols=100 Identities=12% Similarity=0.027 Sum_probs=54.9
Q ss_pred HHHcCCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc
Q 029780 16 LRLVNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS 92 (188)
Q Consensus 16 ~~~~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~ 92 (188)
....+..+|+-+|+ |..+..++..+. .+.+|+.+|.+++.++.+++ .. ...++.+|..+ .+...
T Consensus 14 ~~~~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~---- 80 (155)
T 2g1u_A 14 SKKQKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKEC---- 80 (155)
T ss_dssp ---CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTT----
T ss_pred hcccCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHc----
Confidence 34456678999987 555555444432 25689999999887654331 11 23456666533 22211
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
....+|+|++.............+.+.+.+...++.
T Consensus 81 -~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 81 -GMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp -TGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred -CcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 124689999875544333333444454455555555
No 408
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.96 E-value=0.34 Score=38.60 Aligned_cols=44 Identities=14% Similarity=0.166 Sum_probs=34.1
Q ss_pred EEEEEcccchHHHHHHHhhCC------CCCEEEEEeCCchhHHHHHHHHH
Q 029780 23 KTIEIGVFTGYSLLLTALTIP------EDGQITAIDVNRETYEIGLPIIK 66 (188)
Q Consensus 23 ~vLeiG~g~G~~~~~la~~~~------~~~~v~~iD~~~~~~~~a~~~~~ 66 (188)
.|+|+|.|.|..+..+++.+. ...+++.||+||...+.-++.+.
T Consensus 83 ~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 83 RLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred EEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 799999999999888876542 23589999999988775555443
No 409
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.76 E-value=2.3 Score=32.07 Aligned_cols=104 Identities=18% Similarity=0.271 Sum_probs=62.9
Q ss_pred HHcCCCEEEEEcccchH---HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH------HHHH
Q 029780 17 RLVNAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQ 87 (188)
Q Consensus 17 ~~~~~~~vLeiG~g~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~ 87 (188)
...++|.+|-.|.+.|- .+..|++ .+.+|+.+|.+++.++.+.+.+ + .+...+..|..+ .+..
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~---~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVA---EGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHH
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHH
Confidence 34578899999987763 3333444 3789999999988776655443 3 346677777542 2222
Q ss_pred HhhcccCCCceeEEEEeCCc-----------cch-----------HHHHHHHHhccCcCeEEEEec
Q 029780 88 LLKYSENEGSFDYAFVDADK-----------DNY-----------CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~-----------~~~-----------~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+. .+..|+++-.+.. +.. ....+.+.+.++++|.+|.-.
T Consensus 97 ~~~~---~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 97 VKAE---AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHH---HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHHH---cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 2222 4789999866311 111 112344457888888876643
No 410
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.66 E-value=3 Score=32.73 Aligned_cols=92 Identities=11% Similarity=0.016 Sum_probs=58.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
+..+|.=||+ |..+..+|..+. .+.+|++.|.+++..+.+.+ .+. . ...+..+.+.. ....
T Consensus 21 ~~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~-------a~~~ 82 (358)
T 4e21_A 21 QSMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAK-------LVKP 82 (358)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHH-------SCSS
T ss_pred cCCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhc-------CCCC
Confidence 4568889987 444444444332 25689999999887665443 232 1 12344444433 2456
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
|+||+..........++.+.+.|++|.+++-
T Consensus 83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp CEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhhCCCCCEEEe
Confidence 9999986655677788888889988876664
No 411
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.36 E-value=1.2 Score=28.06 Aligned_cols=81 Identities=14% Similarity=0.014 Sum_probs=48.0
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CC-CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-ED-GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 96 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~-~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 96 (188)
.++|+-+|+ |..+..++..+. .+ .+|+.+|.+++..+.+. . ..+.+...|..+ .+... ..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~------~~ 68 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA------LG 68 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH------TT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH------Hc
Confidence 357899988 555555554432 24 68999999987665443 1 235666666543 23333 35
Q ss_pred ceeEEEEeCCccchHHHHHHH
Q 029780 97 SFDYAFVDADKDNYCNYHERL 117 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~ 117 (188)
.+|+|+...+......+.+.+
T Consensus 69 ~~d~vi~~~~~~~~~~~~~~~ 89 (118)
T 3ic5_A 69 GFDAVISAAPFFLTPIIAKAA 89 (118)
T ss_dssp TCSEEEECSCGGGHHHHHHHH
T ss_pred CCCEEEECCCchhhHHHHHHH
Confidence 789999876544433443333
No 412
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.34 E-value=1.1 Score=34.54 Aligned_cols=93 Identities=13% Similarity=0.065 Sum_probs=60.4
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcccCCCce
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYSENEGSF 98 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~ 98 (188)
.++++=+|+ |..+..+++.+...+.++.+|.+++.++ +++ ..+.++.+|+.+. +.+. .-...
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a-----~i~~a 178 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKA-----NVRGA 178 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHT-----CSTTE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhc-----Chhhc
Confidence 457888876 7888888887743333999999998877 543 1367899998653 3332 24679
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
|.+++..+.+...-..-...+.+.|...++.
T Consensus 179 ~~vi~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 179 RAVIVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred cEEEEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 9998865443322333444567777766665
No 413
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.30 E-value=1.7 Score=35.23 Aligned_cols=101 Identities=14% Similarity=0.190 Sum_probs=59.6
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhc---C---------CCCcEEEEEcchHHHHHH
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKA---G---------VDHKINFIESEALSVLDQ 87 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~---~---------~~~~~~~~~~d~~~~~~~ 87 (188)
..++-=||+ |+.+..+|..+. .+.+|+++|.+++.++..++..... + ...++.+ ..|..+.+
T Consensus 8 ~~~~~vIGl--G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~-- 82 (446)
T 4a7p_A 8 SVRIAMIGT--GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV-- 82 (446)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH--
T ss_pred ceEEEEEcC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH--
Confidence 346777777 555555554442 2568999999999887665420000 0 0122333 23332221
Q ss_pred HhhcccCCCceeEEEEeCCcc-----------chHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
...|+||+.-+.+ ......+.+.+.|++|.++|......
T Consensus 83 --------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 132 (446)
T 4a7p_A 83 --------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVP 132 (446)
T ss_dssp --------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCC
T ss_pred --------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 4578998873221 25667788888999998888765543
No 414
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=92.27 E-value=0.29 Score=38.68 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=47.1
Q ss_pred cCCCEEEEEccc---chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVF---TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g---~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 95 (188)
.++.+||-+|.| .|..++.+|+.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.+... .
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~----~ 238 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALV----S 238 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHH----H
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhc----C
Confidence 677889988433 566777788765 5689999999988777764 45432222222333333333321 2
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
..+|++|-..
T Consensus 239 ~g~d~v~d~~ 248 (379)
T 3iup_A 239 TGATIAFDAT 248 (379)
T ss_dssp HCCCEEEESC
T ss_pred CCceEEEECC
Confidence 4699888543
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.19 E-value=0.44 Score=36.72 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=55.7
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCC--EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
.+|.=||+| ..+..++..+. .+. +|+++|.+++.++.+++ .|... . ...+..+. . ....
T Consensus 34 ~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~--~-~~~~~~~~---~------~~~a 95 (314)
T 3ggo_A 34 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKV---E------DFSP 95 (314)
T ss_dssp SEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCTTGG---G------GGCC
T ss_pred CEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc--h-hcCCHHHH---h------hccC
Confidence 579999975 43333333321 133 89999999987766543 34321 1 12332220 1 1468
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAV 128 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv 128 (188)
|+|++........+.++.+.+.++++.+++
T Consensus 96 DvVilavp~~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 96 DFVMLSSPVRTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHSCTTCEEE
T ss_pred CEEEEeCCHHHHHHHHHHHhhccCCCcEEE
Confidence 999998777777788888888898887654
No 416
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.08 E-value=0.43 Score=37.96 Aligned_cols=103 Identities=20% Similarity=0.194 Sum_probs=61.5
Q ss_pred CCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE---------cch--------
Q 029780 20 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE---------SEA-------- 81 (188)
Q Consensus 20 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~---------~d~-------- 81 (188)
++.+|+-+|+| .|..+..++..+ +.+|+.+|.+++..+.+++ .|. ++.. +..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~----lGa----~~~~l~~~~~~~~gya~~~~~~~~ 252 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS----VGA----QWLDLGIDAAGEGGYARELSEAER 252 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH----TTC----EECCCC-------------CHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----eEEeccccccccccchhhhhHHHH
Confidence 67899999997 455666666665 5699999999988776655 231 1111 000
Q ss_pred ---HHHHHHHhhcccCCCceeEEEEeCC-c--cchHHHHHHHHhccCcCeEEEEeccccCccc
Q 029780 82 ---LSVLDQLLKYSENEGSFDYAFVDAD-K--DNYCNYHERLMKLLKVGGIAVYDNTLWGGTV 138 (188)
Q Consensus 82 ---~~~~~~~~~~~~~~~~~D~i~id~~-~--~~~~~~~~~~~~~L~~gG~lv~~~~~~~g~~ 138 (188)
.+.+.+. -...|+|+.... + ....-+-+.+.+.+|||+++|=-.+-..|..
T Consensus 253 ~~~~~~l~e~------l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 253 AQQQQALEDA------ITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp HHHHHHHHHH------HTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred hhhHHHHHHH------HhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 1122222 267999986521 1 1111123677788999888776544444443
No 417
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.02 E-value=0.065 Score=41.41 Aligned_cols=94 Identities=17% Similarity=0.103 Sum_probs=59.5
Q ss_pred EEEEEcc--cchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeE
Q 029780 23 KTIEIGV--FTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDY 100 (188)
Q Consensus 23 ~vLeiG~--g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~ 100 (188)
+||-+|+ |.|..++.+|+.. +.++++++.+++..+.+++ .|.. ..+. ..+........ .....+|+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~---~v~~--~~~~~~~~~~~-~~~~~~d~ 220 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGAS---EVIS--REDVYDGTLKA-LSKQQWQG 220 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCS---EEEE--HHHHCSSCCCS-SCCCCEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEEE--CCCchHHHHHH-hhcCCccE
Confidence 7999996 5677888888875 5689999999888877765 3432 1222 11110000000 01246998
Q ss_pred EEEeCCccchHHHHHHHHhccCcCeEEEEecc
Q 029780 101 AFVDADKDNYCNYHERLMKLLKVGGIAVYDNT 132 (188)
Q Consensus 101 i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~~ 132 (188)
+|-.... ..++.+++.++++|.++.-..
T Consensus 221 vid~~g~----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 221 AVDPVGG----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEESCCT----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCcH----HHHHHHHHhhcCCCEEEEEec
Confidence 8754332 357888899999999987543
No 418
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.02 E-value=0.29 Score=47.95 Aligned_cols=104 Identities=12% Similarity=0.018 Sum_probs=66.9
Q ss_pred HHcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
+..++.+||-.| .|.|..++.+|+.. +.+|++++.+++..+.+++.+...+... ++.....++...+.+. -.
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga~~---v~~~~~~~~~~~i~~~-t~ 1737 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDETC---FANSRDTSFEQHVLRH-TA 1737 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCSTT---EEESSSSHHHHHHHHT-TT
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCceE---EecCCCHHHHHHHHHh-cC
Confidence 356778999986 46778888899875 6799999998887777776543334321 2222222222222111 01
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..++|+|+-... .+.++..++.|+++|.++.-
T Consensus 1738 g~GvDvVld~~g----~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1738 GKGVDLVLNSLA----EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp SCCEEEEEECCC----HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCceEEEECCC----chHHHHHHHhcCCCcEEEEe
Confidence 347999885332 45688899999999998864
No 419
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.99 E-value=2.3 Score=31.66 Aligned_cols=82 Identities=15% Similarity=0.209 Sum_probs=54.5
Q ss_pred cCCCEEEEEcccchH---HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc-
Q 029780 19 VNAKKTIEIGVFTGY---SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS- 92 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~---~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~- 92 (188)
.++|.+|-.|.+.|- .+..|++ .+.+|+.+|.+++.++.+.+.++..+ .++.++..|..+ ....+.+..
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~---~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFAL---NDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHH
Confidence 467889999977663 3333444 37899999999999988888887766 457788887543 112211110
Q ss_pred cCCCceeEEEEeC
Q 029780 93 ENEGSFDYAFVDA 105 (188)
Q Consensus 93 ~~~~~~D~i~id~ 105 (188)
...+..|+++-.+
T Consensus 80 ~~~G~iDiLVNNA 92 (254)
T 4fn4_A 80 ETYSRIDVLCNNA 92 (254)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 1247899988653
No 420
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.81 E-value=0.63 Score=36.88 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=31.2
Q ss_pred CCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHH
Q 029780 20 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLP 63 (188)
Q Consensus 20 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 63 (188)
++.+|+-+|+| .|..++.+++.+ +.+|+.+|.+++..+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 67899999987 345556666665 4689999999887766544
No 421
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.70 E-value=3.1 Score=30.94 Aligned_cols=110 Identities=18% Similarity=0.194 Sum_probs=61.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCC------------chhHHHHHHHHHhcCCCCcEEEEEcchHHH-
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVN------------RETYEIGLPIIKKAGVDHKINFIESEALSV- 84 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~------------~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~- 84 (188)
..++++|-.|++.| .+..+++.+ ..+.+|+.+|.+ .+.++.+.+.+...+ .++.++..|..+.
T Consensus 8 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 35678998887655 333333333 126799999986 555555555555544 4688888876431
Q ss_pred -HHHHhhcc-cCCCceeEEEEeCCc---------cch-----------HHHHHHHHhccCcCeEEEEec
Q 029780 85 -LDQLLKYS-ENEGSFDYAFVDADK---------DNY-----------CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 85 -~~~~~~~~-~~~~~~D~i~id~~~---------~~~-----------~~~~~~~~~~L~~gG~lv~~~ 131 (188)
+..+.+.. ...+.+|+++..+.. +.. ....+.+.+.++++|.+|.-.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 12211110 013579999876421 111 123345567778888777643
No 422
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=91.60 E-value=0.22 Score=36.81 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=52.3
Q ss_pred CEEEEEcccchHHHHHHHhhCCC-CC----EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPE-DG----QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~-~~----~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
.+|.=||+| ..+..++..+.. +. +|+..|.+++..+.+.+.+ + +.. ..+..+.+ .
T Consensus 3 ~~i~iIG~G--~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g----~~~-~~~~~e~~----------~ 62 (247)
T 3gt0_A 3 KQIGFIGCG--NMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---G----LTT-TTDNNEVA----------K 62 (247)
T ss_dssp CCEEEECCS--HHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---C----CEE-CSCHHHHH----------H
T ss_pred CeEEEECcc--HHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---C----CEE-eCChHHHH----------H
Confidence 357778875 444444433311 32 8999999998776665433 3 222 23333332 3
Q ss_pred ceeEEEEeCCccchHHHHHHHHhccCcCeEEE
Q 029780 97 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAV 128 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv 128 (188)
..|+||+...+....+.++.+.+.++++..++
T Consensus 63 ~aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 63 NADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp HCSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred hCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 47999998766677778888888888887666
No 423
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.56 E-value=2 Score=33.62 Aligned_cols=96 Identities=6% Similarity=-0.033 Sum_probs=59.9
Q ss_pred CCEEEEEcccchHHHHHHHhhCCC-CCEEEEEeCCchhHHHHHHHHHh------cCCCCcEEEEEcchHHHHHHHhhccc
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKK------AGVDHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
..+|.=||+| ..+..+|..+.. +.+|+..+.+++.++..++.-.. ..++.++.+ ..|..+. +
T Consensus 29 ~mkI~VIGaG--~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea---~----- 97 (356)
T 3k96_A 29 KHPIAILGAG--SWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKAS---L----- 97 (356)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHH---H-----
T ss_pred CCeEEEECcc--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHH---H-----
Confidence 3478889885 444444443321 45799999998887766654211 111223333 2333222 1
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
...|+|++.-......+.++.+.+.++++..++.
T Consensus 98 --~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 98 --EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp --TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred --hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5689999987666777888888889998876654
No 424
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.49 E-value=3.2 Score=30.61 Aligned_cols=79 Identities=9% Similarity=0.111 Sum_probs=52.8
Q ss_pred cCCCEEEEEcc----cchH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH------HHHH
Q 029780 19 VNAKKTIEIGV----FTGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQ 87 (188)
Q Consensus 19 ~~~~~vLeiG~----g~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~ 87 (188)
.++|++|-.|. |.|. .+..|++. +.+|+.++.+++..+.+.+.++..+- .++.++..|..+ .+..
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHH
Confidence 35789999984 4454 34445553 78999999999988888888777653 357777777532 2222
Q ss_pred HhhcccCCCceeEEEEe
Q 029780 88 LLKYSENEGSFDYAFVD 104 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id 104 (188)
..+. .+..|.++..
T Consensus 80 ~~~~---~G~iD~lvnn 93 (256)
T 4fs3_A 80 IGKD---VGNIDGVYHS 93 (256)
T ss_dssp HHHH---HCCCSEEEEC
T ss_pred HHHH---hCCCCEEEec
Confidence 2221 4789988865
No 425
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=91.27 E-value=0.63 Score=36.51 Aligned_cols=80 Identities=15% Similarity=0.047 Sum_probs=49.4
Q ss_pred CCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCce
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGSF 98 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~ 98 (188)
..+|+-+|| |..+..+++.+.....|+.+|.+.+.++.+++ .+..+..|+.+ .+..+. .+.
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~------~~~ 78 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVM------KEF 78 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHH------TTC
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHH------hCC
Confidence 357999998 66666666666656789999998877665432 23445555533 333432 568
Q ss_pred eEEEEeCCccchHHHHHHH
Q 029780 99 DYAFVDADKDNYCNYHERL 117 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~ 117 (188)
|+|+...++.......+.|
T Consensus 79 DvVi~~~p~~~~~~v~~~~ 97 (365)
T 3abi_A 79 ELVIGALPGFLGFKSIKAA 97 (365)
T ss_dssp SEEEECCCGGGHHHHHHHH
T ss_pred CEEEEecCCcccchHHHHH
Confidence 9988765443333444444
No 426
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.12 E-value=3.9 Score=30.83 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=47.7
Q ss_pred CCCEEEEEcccc----hH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc
Q 029780 20 NAKKTIEIGVFT----GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS 92 (188)
Q Consensus 20 ~~~~vLeiG~g~----G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~ 92 (188)
.++++|-.|.++ |. .+..|++. +.+|+.++.+++..+.+++..+..+ .+.++..|..+ .+..+.+..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ---GAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC---CCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHH
Confidence 457899999743 33 33334443 6799999998877666666555544 35677777543 122221110
Q ss_pred -cCCCceeEEEEeC
Q 029780 93 -ENEGSFDYAFVDA 105 (188)
Q Consensus 93 -~~~~~~D~i~id~ 105 (188)
...+.+|+++..+
T Consensus 103 ~~~~g~iD~lVnnA 116 (296)
T 3k31_A 103 AEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 0136789998764
No 427
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=91.11 E-value=2.9 Score=30.73 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=61.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+ + .++.++..|..+. +..+.+.. ..
T Consensus 6 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHH
Confidence 45678998887655 334444333 13679999999988776665544 2 3678888876432 12111100 01
Q ss_pred CCceeEEEEeCCcc-----------ch-----------HHHHHHHHhccCcCeEEEEec
Q 029780 95 EGSFDYAFVDADKD-----------NY-----------CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 95 ~~~~D~i~id~~~~-----------~~-----------~~~~~~~~~~L~~gG~lv~~~ 131 (188)
.+.+|+++..+... .. ....+.+.+.++++|.+|.-.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 80 LGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 36899988764211 11 123345557777888777643
No 428
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=91.05 E-value=0.97 Score=35.19 Aligned_cols=104 Identities=14% Similarity=0.131 Sum_probs=55.3
Q ss_pred HHcCCCEEEEEcc--cchHHHHHHHhhCCCCCEE-EEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhccc
Q 029780 17 RLVNAKKTIEIGV--FTGYSLLLTALTIPEDGQI-TAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSE 93 (188)
Q Consensus 17 ~~~~~~~vLeiG~--g~G~~~~~la~~~~~~~~v-~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 93 (188)
+..++.+||-+|+ +.|..++.+|+.. +.++ ..++.++... .-++.++..|.. .++..+.. ....+.+...
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~-~~~~~~~~lGa~---~vi~~~~~-~~~~~~~~~~ 236 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQ-KLSDRLKSLGAE---HVITEEEL-RRPEMKNFFK 236 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHH-HHHHHHHHTTCS---EEEEHHHH-HSGGGGGTTS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchH-HHHHHHHhcCCc---EEEecCcc-hHHHHHHHHh
Confidence 4557789999996 5778888899875 4554 4455544321 112233445632 22222110 0011111000
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+.+|+||-.... .. ...+++.|+++|.++.-.
T Consensus 237 ~~~~~Dvvid~~g~---~~-~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 237 DMPQPRLALNCVGG---KS-STELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSCCCSEEEESSCH---HH-HHHHHTTSCTTCEEEECC
T ss_pred CCCCceEEEECCCc---HH-HHHHHHhhCCCCEEEEEe
Confidence 11258988754322 12 245789999999998753
No 429
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.94 E-value=0.71 Score=34.85 Aligned_cols=87 Identities=8% Similarity=-0.010 Sum_probs=54.8
Q ss_pred CEEEEEcccchHHHHHHHhhCCC-C---CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPE-D---GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~-~---~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.+|.=||+| ..+..++..+.. + .+|+..|.+++..+.+++. .+ +.. ..+..+.+ ..
T Consensus 4 ~~I~iIG~G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~~~~----------~~ 63 (280)
T 3tri_A 4 SNITFIGGG--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK---CG----VHT-TQDNRQGA----------LN 63 (280)
T ss_dssp SCEEEESCS--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT---TC----CEE-ESCHHHHH----------SS
T ss_pred CEEEEEccc--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH---cC----CEE-eCChHHHH----------hc
Confidence 467888885 433333333211 2 2799999999877665543 23 332 23333321 46
Q ss_pred eeEEEEeCCccchHHHHHHHHhc-cCcCeEEE
Q 029780 98 FDYAFVDADKDNYCNYHERLMKL-LKVGGIAV 128 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~-L~~gG~lv 128 (188)
.|+||+...+....+.++.+.+. ++++..++
T Consensus 64 aDvVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 64 ADVVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred CCeEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 79999987777778888888887 77765555
No 430
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.92 E-value=3.8 Score=30.78 Aligned_cols=105 Identities=13% Similarity=0.187 Sum_probs=60.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchh-HHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhhc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRET-YEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKY 91 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~-~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~ 91 (188)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++. .+...+.++..+ .++.++..|..+. +....+.
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578888887654 344444333 136799999987653 444444444443 4688888886532 2222211
Q ss_pred ccCCCceeEEEEeCCc----c-----c---h-----------HHHHHHHHhccCcCeEEEEe
Q 029780 92 SENEGSFDYAFVDADK----D-----N---Y-----------CNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 92 ~~~~~~~D~i~id~~~----~-----~---~-----------~~~~~~~~~~L~~gG~lv~~ 130 (188)
.+.+|+++..+.. . . . ....+.+.+.++++|.+|.-
T Consensus 123 ---~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 ---LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp ---HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ---cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 3678999876321 1 0 0 12345556788888877764
No 431
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.80 E-value=3.7 Score=30.14 Aligned_cols=79 Identities=4% Similarity=-0.029 Sum_probs=48.9
Q ss_pred CCCEEEEEccc----chH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHH
Q 029780 20 NAKKTIEIGVF----TGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQL 88 (188)
Q Consensus 20 ~~~~vLeiG~g----~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~ 88 (188)
+++++|-.|++ .|. .+..|++. +.+|+.++.++...+.+++..+..+- .++.++..|..+ .+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA---GARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC---CCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHH
Confidence 46789999965 333 33344443 67999999887776666666555442 257888877542 22222
Q ss_pred hhcccCCCceeEEEEeC
Q 029780 89 LKYSENEGSFDYAFVDA 105 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~ 105 (188)
.+. .+.+|.++..+
T Consensus 82 ~~~---~g~id~li~~A 95 (266)
T 3oig_A 82 KEQ---VGVIHGIAHCI 95 (266)
T ss_dssp HHH---HSCCCEEEECC
T ss_pred HHH---hCCeeEEEEcc
Confidence 211 35789888764
No 432
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.66 E-value=1.8 Score=35.19 Aligned_cols=71 Identities=18% Similarity=0.143 Sum_probs=50.6
Q ss_pred CCEEEEEcccchHHHHHHHhhCCC-CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIPE-DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 97 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 97 (188)
..+|+=+|+ |..+..+|+.+.. +..|+.||.+++.++.+.+.+ .+..++||+.+ .+.+. .-..
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A-----gi~~ 68 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA-----GAQD 68 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH-----TTTT
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc-----CCCc
Confidence 346777666 7888888888753 467999999999888776543 26778999865 45443 2467
Q ss_pred eeEEEEeC
Q 029780 98 FDYAFVDA 105 (188)
Q Consensus 98 ~D~i~id~ 105 (188)
.|++++--
T Consensus 69 ad~~ia~t 76 (461)
T 4g65_A 69 ADMLVAVT 76 (461)
T ss_dssp CSEEEECC
T ss_pred CCEEEEEc
Confidence 89887643
No 433
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.49 E-value=3.6 Score=32.71 Aligned_cols=93 Identities=10% Similarity=0.104 Sum_probs=56.1
Q ss_pred EEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCC--------------CCcEEEEEcchHHHHHHH
Q 029780 23 KTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGV--------------DHKINFIESEALSVLDQL 88 (188)
Q Consensus 23 ~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~--------------~~~~~~~~~d~~~~~~~~ 88 (188)
+|.-||+ |+.+..+|..+..+.+|+++|.+++.++..++. +. ..++.+ ..+..+.+
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~----~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~--- 71 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINNG----LSPIQDEYIEYYLKSKQLSIKA-TLDSKAAY--- 71 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTT----CCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH---
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcC----CCCcCCCCHHHHHHhccCcEEE-eCCHHHHh---
Confidence 4666777 666666666554456899999998876654431 11 112222 22322221
Q ss_pred hhcccCCCceeEEEEeCCcc-----------chHHHHHHHHhccCcCeEEEEeccc
Q 029780 89 LKYSENEGSFDYAFVDADKD-----------NYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~-----------~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
...|+||+..... .....++.+.+ +++|.+++.....
T Consensus 72 -------~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~ 119 (402)
T 1dlj_A 72 -------KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTI 119 (402)
T ss_dssp -------HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCC
T ss_pred -------cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCC
Confidence 3478999875433 35677777878 8888887763333
No 434
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.39 E-value=4.9 Score=30.77 Aligned_cols=90 Identities=12% Similarity=-0.008 Sum_probs=54.3
Q ss_pred CEEEEEcccchHHHHHHHhhCCC-C-CEEEEEeCCchh---HHHHHHHHHhcCCCCcEEEEEc-chHHHHHHHhhcccCC
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPE-D-GQITAIDVNRET---YEIGLPIIKKAGVDHKINFIES-EALSVLDQLLKYSENE 95 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~-~-~~v~~iD~~~~~---~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~ 95 (188)
.+|.=||+ |..+..++..+.. + .+|++.|.+++. .+...+.+...+. .. +..+. .
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~----------~ 85 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAG----------I 85 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGG----------G
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHH----------H
Confidence 57888887 5555555544422 4 589999998732 2222223333342 22 22222 1
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
...|+||+........+.++.+.+.+++|.+++-.
T Consensus 86 ~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~ 120 (317)
T 4ezb_A 86 ACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDL 120 (317)
T ss_dssp GGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEEC
T ss_pred hcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEEC
Confidence 45799999876666666678888889988876654
No 435
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.34 E-value=4.6 Score=30.39 Aligned_cols=82 Identities=11% Similarity=0.156 Sum_probs=48.6
Q ss_pred HcCCCEEEEEccc----chH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhh
Q 029780 18 LVNAKKTIEIGVF----TGY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLK 90 (188)
Q Consensus 18 ~~~~~~vLeiG~g----~G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~ 90 (188)
..+++++|-.|.+ .|. .+..|++. +.+|+.++.+++..+.+++..+..+ ++.++..|..+. +..+.+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~---G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREA---GAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHT---TCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHC---CCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHH
Confidence 3567889999965 333 33334443 6789999988765555555544443 477888776431 222211
Q ss_pred cc-cCCCceeEEEEeC
Q 029780 91 YS-ENEGSFDYAFVDA 105 (188)
Q Consensus 91 ~~-~~~~~~D~i~id~ 105 (188)
.. ...+.+|+++..+
T Consensus 102 ~~~~~~g~iD~lVnnA 117 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAI 117 (293)
T ss_dssp HHHHHTSCCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 10 1146899998764
No 436
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.17 E-value=2.6 Score=32.14 Aligned_cols=84 Identities=8% Similarity=0.057 Sum_probs=48.9
Q ss_pred CCCEEEEEcccc-hHH-HHHHHhhCCCCCEEEEEeCCc------------------hhHHHHHHHHHhcCCCCcEEEEEc
Q 029780 20 NAKKTIEIGVFT-GYS-LLLTALTIPEDGQITAIDVNR------------------ETYEIGLPIIKKAGVDHKINFIES 79 (188)
Q Consensus 20 ~~~~vLeiG~g~-G~~-~~~la~~~~~~~~v~~iD~~~------------------~~~~~a~~~~~~~~~~~~~~~~~~ 79 (188)
+..+|+-+|+|. |.. +..|+.. . -++++.+|.+. ...+.+++.+...+-.-+++.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 456999999973 443 3335544 2 47999999776 566777888877664444555554
Q ss_pred chH--HHHHHHhh----ccc-CCCceeEEEEeC
Q 029780 80 EAL--SVLDQLLK----YSE-NEGSFDYAFVDA 105 (188)
Q Consensus 80 d~~--~~~~~~~~----~~~-~~~~~D~i~id~ 105 (188)
+.. +.+..+.+ ... ....||+|+-..
T Consensus 113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~ 145 (292)
T 3h8v_A 113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCV 145 (292)
T ss_dssp CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred cCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence 432 22233211 000 014799998544
No 437
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.11 E-value=1.7 Score=35.51 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=58.1
Q ss_pred CCCEEEEEcccc-hH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHh---cCC---------CCcEEEEEcchHHHH
Q 029780 20 NAKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKK---AGV---------DHKINFIESEALSVL 85 (188)
Q Consensus 20 ~~~~vLeiG~g~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~---~~~---------~~~~~~~~~d~~~~~ 85 (188)
...+|.-||+|. |. .+..|++. +.+|+++|.+++.++..++.... .++ ..++.+ ..|..+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~---G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~ 82 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI---GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV 82 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh
Confidence 345788888863 22 23334432 56899999999887766553100 000 012332 22332221
Q ss_pred HHHhhcccCCCceeEEEEeCCc----------cchHHHHHHHHhccCcCeEEEEeccc
Q 029780 86 DQLLKYSENEGSFDYAFVDADK----------DNYCNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 86 ~~~~~~~~~~~~~D~i~id~~~----------~~~~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
...|+||+.-.. ......++.+.+.|++|.+++.....
T Consensus 83 ----------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv 130 (478)
T 2y0c_A 83 ----------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV 130 (478)
T ss_dssp ----------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred ----------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 357899987533 45667778888899998877665433
No 438
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.01 E-value=3.5 Score=33.40 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=59.2
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhc---CC---------CCcEEEEEcchHHHHHHH
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKA---GV---------DHKINFIESEALSVLDQL 88 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~---~~---------~~~~~~~~~d~~~~~~~~ 88 (188)
.+|.-||+ |+.+..+|..+. .+.+|+++|.+++.++..++..... ++ ..++.+ ..|..+.
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea---- 75 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA---- 75 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH----
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH----
Confidence 36777887 555555554432 2568999999998877665421000 00 122332 2333222
Q ss_pred hhcccCCCceeEEEEeCCcc----------chHHHHHHHHhccCcCeEEEEecccc
Q 029780 89 LKYSENEGSFDYAFVDADKD----------NYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~~----------~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
-...|+||+..+.. .....++.+.+.+++|.+++......
T Consensus 76 ------~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~ 125 (450)
T 3gg2_A 76 ------VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVP 125 (450)
T ss_dssp ------GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred ------HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCC
Confidence 14579999875433 45677788888899888777655443
No 439
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=89.97 E-value=1.7 Score=35.28 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=26.7
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHH
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGL 62 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~ 62 (188)
.+|--||+ |+.++.+|..+. .+-+|+++|++++.++..+
T Consensus 22 ~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 46888887 555554443332 2569999999998877654
No 440
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.91 E-value=2.3 Score=32.53 Aligned_cols=85 Identities=9% Similarity=0.128 Sum_probs=53.9
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cCC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 95 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~~ 95 (188)
.+++||-.|++.| .+..+++.+ ..+.+|+.++.+++..+.+.+.+...+...++.++..|..+. +..+.+.. ...
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4678898887654 444444433 236799999999988888777776655434688888886431 22221110 013
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
+.+|+++..+
T Consensus 86 g~id~lv~nA 95 (319)
T 3ioy_A 86 GPVSILCNNA 95 (319)
T ss_dssp CCEEEEEECC
T ss_pred CCCCEEEECC
Confidence 6899998764
No 441
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.87 E-value=4.5 Score=29.55 Aligned_cols=83 Identities=11% Similarity=0.097 Sum_probs=50.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCC--CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIP--EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~--~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
+.++||-.|+ +|..+..+++.+. .+.+|+.++.+++......+.+...+ .++.++..|..+. +..+.+.. ..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4567887774 5666666665542 26799999998877776666665544 3577888876432 22221100 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 80 ~g~id~li~~A 90 (276)
T 1wma_A 80 YGGLDVLVNNA 90 (276)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 25799998664
No 442
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.80 E-value=0.91 Score=33.97 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=52.7
Q ss_pred EEEEEcccchHHHHHHHhhCCC-CC--EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC-ce
Q 029780 23 KTIEIGVFTGYSLLLTALTIPE-DG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG-SF 98 (188)
Q Consensus 23 ~vLeiG~g~G~~~~~la~~~~~-~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~ 98 (188)
+|.=||+| ..+..++..+.. +. +|+++|.+++..+.++ ..|... .. ..+..+. .. ..
T Consensus 3 ~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~~-~~~~~~~----------~~~~a 63 (281)
T 2g5c_A 3 NVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--EG-TTSIAKV----------EDFSP 63 (281)
T ss_dssp EEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG----------GGTCC
T ss_pred EEEEEecC--HHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--cc-cCCHHHH----------hcCCC
Confidence 57778875 444444433321 33 7999999988766544 234321 11 2222111 14 68
Q ss_pred eEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
|+|++..........++.+.+.++++.+++.
T Consensus 64 DvVilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 64 DFVMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp SEEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 9999887666666777777788888875553
No 443
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.73 E-value=1.1 Score=35.87 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=33.3
Q ss_pred CCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHH
Q 029780 20 NAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLP 63 (188)
Q Consensus 20 ~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~ 63 (188)
++.+|+-+|+| .|..+..++..+ +.+|+.+|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 67899999998 466666777765 5799999999988776654
No 444
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=89.65 E-value=3.2 Score=27.93 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=49.6
Q ss_pred ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc-
Q 029780 29 VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK- 107 (188)
Q Consensus 29 ~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~- 107 (188)
.|.+.......+......+|..+|-++......++.+...+.. .+.....+..+.+..+. ...+|+|++|...
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~al~~l~-----~~~~dlvilD~~l~ 82 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDM-KVVGFAKDGLEAVEKAI-----ELKPDVITMDIEMP 82 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHH-----HHCCSEEEECSSCS
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHhc-----cCCCCEEEEeCCCC
Confidence 4455555555544333468999999999999989888775421 11223556666555443 2469999999643
Q ss_pred -cchHHHHHHHHhccCcCeEEEEe
Q 029780 108 -DNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 108 -~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
.+..++++.+.+.- +--++++.
T Consensus 83 ~~~g~~l~~~lr~~~-~~~ii~~s 105 (164)
T 3t8y_A 83 NLNGIEALKLIMKKA-PTRVIMVS 105 (164)
T ss_dssp SSCHHHHHHHHHHHS-CCEEEEEE
T ss_pred CCCHHHHHHHHHhcC-CceEEEEe
Confidence 23455666664432 34455554
No 445
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.59 E-value=0.97 Score=36.10 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=31.5
Q ss_pred cCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHH
Q 029780 19 VNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGL 62 (188)
Q Consensus 19 ~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 62 (188)
.++.+|+-+|+| .|..++.++..+ +.+|+.+|.+++..+.++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 357899999987 455566667665 468999999998776653
No 446
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=89.40 E-value=1.6 Score=36.00 Aligned_cols=89 Identities=12% Similarity=0.081 Sum_probs=54.5
Q ss_pred HcCCCEEEEEccc-chHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCC
Q 029780 18 LVNAKKTIEIGVF-TGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEG 96 (188)
Q Consensus 18 ~~~~~~vLeiG~g-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 96 (188)
..++++|+-+|+| .|......++.+ +.+|+++|.++.....+++ .|. +. .+..+ . ..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e----~------l~ 328 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVEE----A------IG 328 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHHH----H------GG
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHH----H------Hh
Confidence 4577899999985 344444555554 5699999999887655543 342 22 23222 2 14
Q ss_pred ceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 97 SFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 97 ~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..|+|+......... -....+.+++||.++.-
T Consensus 329 ~aDvVi~atgt~~~i--~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 329 DADIVVTATGNKDII--MLEHIKAMKDHAILGNI 360 (494)
T ss_dssp GCSEEEECSSSSCSB--CHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHHHH--HHHHHHhcCCCcEEEEe
Confidence 689998764332211 12556778999988753
No 447
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=89.39 E-value=0.24 Score=43.30 Aligned_cols=98 Identities=9% Similarity=0.044 Sum_probs=59.6
Q ss_pred HHcCCCEEEEEc--ccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 17 RLVNAKKTIEIG--VFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 17 ~~~~~~~vLeiG--~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
+..++.+||-.| .|.|..++.+|+.. +.+|++++.++ ..+..+ .+...-+.....+..+.+.+.. .
T Consensus 342 ~l~~G~~VLI~gaaGgvG~~aiqlAk~~--Ga~V~~t~~~~-k~~~l~-----lga~~v~~~~~~~~~~~i~~~t----~ 409 (795)
T 3slk_A 342 GLRPGESLLVHSAAGGVGMAAIQLARHL--GAEVYATASED-KWQAVE-----LSREHLASSRTCDFEQQFLGAT----G 409 (795)
T ss_dssp CCCTTCCEEEESTTBHHHHHHHHHHHHT--TCCEEEECCGG-GGGGSC-----SCGGGEECSSSSTHHHHHHHHS----C
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHc--CCEEEEEeChH-Hhhhhh-----cChhheeecCChhHHHHHHHHc----C
Confidence 455778999998 46788999999986 56888888554 222111 3321111111123333333321 2
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
...+|+||-.... +.++..++.|+++|.++.-
T Consensus 410 g~GvDvVld~~gg----~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 410 GRGVDVVLNSLAG----EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp SSCCSEEEECCCT----TTTHHHHTSCTTCEEEEEC
T ss_pred CCCeEEEEECCCc----HHHHHHHHHhcCCCEEEEe
Confidence 3579998864322 3457888999999999874
No 448
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=89.37 E-value=5.2 Score=29.62 Aligned_cols=86 Identities=10% Similarity=0.011 Sum_probs=52.5
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
.+++++|-.|+. |..+..+++.+ ..+.+|+.++.+++..+...+.+...+...++.++..|..+. +..+.+.. ..
T Consensus 30 l~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 356788888864 44444444433 136799999999887777666666655555678888876432 22221100 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 109 ~g~iD~vi~~A 119 (279)
T 1xg5_A 109 HSGVDICINNA 119 (279)
T ss_dssp HCCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 25789998764
No 449
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=89.36 E-value=1.9 Score=31.66 Aligned_cols=83 Identities=16% Similarity=0.045 Sum_probs=53.4
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc-cC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS-EN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 94 (188)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|..+ .+..+.+.. ..
T Consensus 5 ~~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 35678888887655 333333333 126799999999998888887777654 468888888643 222222210 12
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
+.+|+++..+
T Consensus 82 -g~id~lv~nA 91 (252)
T 3h7a_A 82 -APLEVTIFNV 91 (252)
T ss_dssp -SCEEEEEECC
T ss_pred -CCceEEEECC
Confidence 6899998764
No 450
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=89.27 E-value=2.2 Score=32.31 Aligned_cols=84 Identities=17% Similarity=0.230 Sum_probs=52.8
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
..++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|..+. +..+.+.. ..
T Consensus 29 l~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45678998887655 334444333 136799999999988888777776654 3688888876532 22221110 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 106 ~g~id~lvnnA 116 (301)
T 3tjr_A 106 LGGVDVVFSNA 116 (301)
T ss_dssp HSSCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 25799998764
No 451
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.13 E-value=3.3 Score=31.91 Aligned_cols=97 Identities=9% Similarity=0.063 Sum_probs=57.3
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHh----cCCCC--cEEEEEcchHHHHHHHhhcccC
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKK----AGVDH--KINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~----~~~~~--~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
.+|.=||+|. .+..++..+. .+.+|+.+|.+++.++..++.... .+... ++.....+..+. +
T Consensus 5 mki~iiG~G~--~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------ 73 (359)
T 1bg6_A 5 KTYAVLGLGN--GGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---V------ 73 (359)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---H------
T ss_pred CeEEEECCCH--HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---H------
Confidence 5789999864 3333333221 156899999998877665543100 00000 000112232221 1
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEEe
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVYD 130 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~~ 130 (188)
..+|+|++........+.++.+.+.++++..++..
T Consensus 74 -~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 -KDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp -TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred -hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 46899999876666678888888889998876654
No 452
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=89.11 E-value=2.4 Score=31.38 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=52.2
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEG 96 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~ 96 (188)
.++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+....+.++..|..+ .+..+.+. .+
T Consensus 9 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---YP 84 (267)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---CC
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---cC
Confidence 4678888886544 444444433 13679999999988877776666655433457778877643 23333322 46
Q ss_pred ceeEEEEeC
Q 029780 97 SFDYAFVDA 105 (188)
Q Consensus 97 ~~D~i~id~ 105 (188)
..|+++..+
T Consensus 85 ~id~lv~nA 93 (267)
T 3t4x_A 85 KVDILINNL 93 (267)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 899998764
No 453
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.06 E-value=5 Score=30.17 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=60.5
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCc--hhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-c
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNR--ETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 93 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~ 93 (188)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+. +..+...+.++..+ .++.++..|..+. +..+.+.. .
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578898887544 444444433 1267899888763 34455555555544 4678888776431 12211110 0
Q ss_pred CCCceeEEEEeCCc----c-----c---h-----------HHHHHHHHhccCcCeEEEEec
Q 029780 94 NEGSFDYAFVDADK----D-----N---Y-----------CNYHERLMKLLKVGGIAVYDN 131 (188)
Q Consensus 94 ~~~~~D~i~id~~~----~-----~---~-----------~~~~~~~~~~L~~gG~lv~~~ 131 (188)
..+.+|+++..+.. . . . ..+.+.+.+.++++|.+|.-.
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 13678999876421 0 0 0 123445567888888877643
No 454
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=88.99 E-value=0.95 Score=34.12 Aligned_cols=40 Identities=20% Similarity=0.386 Sum_probs=27.1
Q ss_pred CCceeEEEEeCC----ccchHHHHHH----------HHhccCcCeEEEEecccc
Q 029780 95 EGSFDYAFVDAD----KDNYCNYHER----------LMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 95 ~~~~D~i~id~~----~~~~~~~~~~----------~~~~L~~gG~lv~~~~~~ 134 (188)
.+.||+||++.. .+++++.-+. ...+|+|||.+++...-+
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 389999999952 2344443222 247999999999875544
No 455
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.79 E-value=3.5 Score=33.49 Aligned_cols=90 Identities=17% Similarity=0.118 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHH-cCCCEEEEEcccchHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH-
Q 029780 6 PDAGQLMAMLLRL-VNAKKTIEIGVFTGYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS- 83 (188)
Q Consensus 6 ~~~~~~l~~l~~~-~~~~~vLeiG~g~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~- 83 (188)
....+++..+-.. .+.++|+=+|. |..+..+|+.+.....+..+|.+++..+.+.+.+ ++..+++||+.+
T Consensus 219 ~~i~~~~~~~g~~~~~~~~v~I~Gg--G~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l------~~~~Vi~GD~td~ 290 (461)
T 4g65_A 219 NHIRSVMSELQRLEKPYRRIMIVGG--GNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL------ENTIVFCGDAADQ 290 (461)
T ss_dssp TTHHHHHHHTTGGGSCCCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC------TTSEEEESCTTCH
T ss_pred chHHHHHHhhccccccccEEEEEcc--hHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC------CCceEEeccccch
Confidence 3444555544333 34568888776 7788888888876789999999998777666553 257789999876
Q ss_pred -HHHHHhhcccCCCceeEEEEeCCcc
Q 029780 84 -VLDQLLKYSENEGSFDYAFVDADKD 108 (188)
Q Consensus 84 -~~~~~~~~~~~~~~~D~i~id~~~~ 108 (188)
.+.+- .-...|+++.--...
T Consensus 291 ~~L~ee-----~i~~~D~~ia~T~~D 311 (461)
T 4g65_A 291 ELLTEE-----NIDQVDVFIALTNED 311 (461)
T ss_dssp HHHHHT-----TGGGCSEEEECCSCH
T ss_pred hhHhhc-----CchhhcEEEEcccCc
Confidence 34331 235789988754433
No 456
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=88.56 E-value=2.3 Score=38.09 Aligned_cols=74 Identities=8% Similarity=-0.090 Sum_probs=51.5
Q ss_pred CEEEEEcccchHHHHHHHhhCCCCC--EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcc-------
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPEDG--QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYS------- 92 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~~~--~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------- 92 (188)
.+++|+.||.|..+.-+..+ +. .+.++|+++.+....+.|+ +...++.+|..++.......+
T Consensus 541 l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N~------p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLNN------PGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHHC------TTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhC------CCCccccccHHHHhhhccchhhhhhhhh
Confidence 48999999999999988775 43 5789999999888777764 235677888766543211110
Q ss_pred --cCCCceeEEEEe
Q 029780 93 --ENEGSFDYAFVD 104 (188)
Q Consensus 93 --~~~~~~D~i~id 104 (188)
+..+.+|+|+..
T Consensus 612 ~lp~~~~vDll~GG 625 (1002)
T 3swr_A 612 RLPQKGDVEMLCGG 625 (1002)
T ss_dssp BCCCTTTCSEEEEC
T ss_pred hcccCCCeeEEEEc
Confidence 012468999865
No 457
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=88.45 E-value=5.6 Score=28.80 Aligned_cols=78 Identities=12% Similarity=0.082 Sum_probs=49.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~ 95 (188)
.++++||-.|++.| .+..+++.+ ..+.+|+.++.+++.++...+.+ ..++.+...|..+ .+..+.+. .
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~---~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK---T 82 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT---C
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh---c
Confidence 35678888887544 444444433 13679999999888776665544 2367888887654 23333332 3
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
+.+|+++..+
T Consensus 83 ~~id~li~~A 92 (249)
T 3f9i_A 83 SNLDILVCNA 92 (249)
T ss_dssp SCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5799998654
No 458
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.37 E-value=1.5 Score=33.65 Aligned_cols=95 Identities=6% Similarity=-0.047 Sum_probs=55.2
Q ss_pred CCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEE-----EcchHHHHHHHhhccc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFI-----ESEALSVLDQLLKYSE 93 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~-----~~d~~~~~~~~~~~~~ 93 (188)
...+|.-||+|. .+..+|..+. .+..|+.+ .+++.++..++.-..... ....+. ..+.. .
T Consensus 18 ~~~kI~IiGaGa--~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~-~~~~~~~~~~~~~~~~----~------ 83 (318)
T 3hwr_A 18 QGMKVAIMGAGA--VGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLET-QSFDEQVKVSASSDPS----A------ 83 (318)
T ss_dssp --CEEEEESCSH--HHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEEC-SSCEEEECCEEESCGG----G------
T ss_pred cCCcEEEECcCH--HHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEc-CCCcEEEeeeeeCCHH----H------
Confidence 446799998863 3333333221 14588888 888777666543100000 011111 11211 1
Q ss_pred CCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 94 NEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 94 ~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
...+|+|++.-......+.++.+.+.++++..++.
T Consensus 84 -~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 118 (318)
T 3hwr_A 84 -VQGADLVLFCVKSTDTQSAALAMKPALAKSALVLS 118 (318)
T ss_dssp -GTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEE
T ss_pred -cCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEE
Confidence 25789999987777778888999899999887664
No 459
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=88.23 E-value=6.1 Score=28.99 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=48.7
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEE-eCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-c
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAI-DVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 93 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~i-D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~ 93 (188)
..++++|-.|++.| .+..+++.+ ..+.+|+.+ +.+++..+.+.+.+...+ .++.++..|..+. +..+.+.. .
T Consensus 6 l~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35678998887655 333333333 126788887 667776666666665544 4577888876431 22221110 0
Q ss_pred CCCceeEEEEeC
Q 029780 94 NEGSFDYAFVDA 105 (188)
Q Consensus 94 ~~~~~D~i~id~ 105 (188)
..+..|.++..+
T Consensus 83 ~~g~id~lv~nA 94 (259)
T 3edm_A 83 KFGEIHGLVHVA 94 (259)
T ss_dssp HHCSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 136899998764
No 460
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.06 E-value=1.9 Score=33.35 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=55.2
Q ss_pred CEEEEEcccchH--HHHHHHhhCCCC-------CEEEEEeCCch-----hHHHHHHHHHhc----C--CCCcEEEEEcch
Q 029780 22 KKTIEIGVFTGY--SLLLTALTIPED-------GQITAIDVNRE-----TYEIGLPIIKKA----G--VDHKINFIESEA 81 (188)
Q Consensus 22 ~~vLeiG~g~G~--~~~~la~~~~~~-------~~v~~iD~~~~-----~~~~a~~~~~~~----~--~~~~~~~~~~d~ 81 (188)
.+|.=||+|.=. .+..+++. + .+|+.+|.+++ ..+..++..... + +..++.. ..+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~---g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~ 84 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN---AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-VPDV 84 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE-ESSH
T ss_pred CeEEEECCCHHHHHHHHHHHhc---CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE-EcCH
Confidence 478899986422 22233332 3 47999999887 555444321100 1 1122332 2333
Q ss_pred HHHHHHHhhcccCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 82 LSVLDQLLKYSENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 82 ~~~~~~~~~~~~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
.+. . ...|+||+..........++.+.+.++++..++.
T Consensus 85 ~~~---~-------~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~ 122 (354)
T 1x0v_A 85 VQA---A-------EDADILIFVVPHQFIGKICDQLKGHLKANATGIS 122 (354)
T ss_dssp HHH---H-------TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEE
T ss_pred HHH---H-------cCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 222 1 4689999987766777888888888888876654
No 461
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.00 E-value=6.3 Score=28.84 Aligned_cols=82 Identities=11% Similarity=0.045 Sum_probs=49.1
Q ss_pred HcCCCEEEEEccc-chHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHh
Q 029780 18 LVNAKKTIEIGVF-TGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLL 89 (188)
Q Consensus 18 ~~~~~~vLeiG~g-~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~ 89 (188)
..++++||-.|++ +|..+..+++.+ ..+.+|+.++.+....+.+++..+..+ .+.++..|..+ .+....
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHH
Confidence 3456789999964 233344444333 126799999988766666666555544 36677877543 222222
Q ss_pred hcccCCCceeEEEEeC
Q 029780 90 KYSENEGSFDYAFVDA 105 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~ 105 (188)
+. .+.+|+++..+
T Consensus 88 ~~---~g~id~lv~nA 100 (271)
T 3ek2_A 88 TH---WDSLDGLVHSI 100 (271)
T ss_dssp HH---CSCEEEEEECC
T ss_pred HH---cCCCCEEEECC
Confidence 22 46899998764
No 462
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=87.99 E-value=3.7 Score=30.57 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=53.6
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKY 91 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~ 91 (188)
.+++.+|-.|.+.|- +..+|+.+ ..+.+|+.+|.+++.++.+.+.+...+ .++..+..|..+ .+.+..+
T Consensus 7 L~gKvalVTGas~GI-G~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~- 82 (255)
T 4g81_D 7 LTGKTALVTGSARGL-GFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDA- 82 (255)
T ss_dssp CTTCEEEETTCSSHH-HHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHH-
Confidence 467888888877663 33333332 137899999999998888877777765 357777777543 2222322
Q ss_pred ccCCCceeEEEEeC
Q 029780 92 SENEGSFDYAFVDA 105 (188)
Q Consensus 92 ~~~~~~~D~i~id~ 105 (188)
..++.|+++-.+
T Consensus 83 --~~G~iDiLVNNA 94 (255)
T 4g81_D 83 --EGIHVDILINNA 94 (255)
T ss_dssp --TTCCCCEEEECC
T ss_pred --HCCCCcEEEECC
Confidence 357899998663
No 463
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.95 E-value=6.5 Score=29.03 Aligned_cols=80 Identities=14% Similarity=0.144 Sum_probs=45.1
Q ss_pred cCCCEEEEEccc-chHHHHH-HHhhCCCCCEEEEEeCCc-------------------hhHHHHHHHHHhcCCCCcEEEE
Q 029780 19 VNAKKTIEIGVF-TGYSLLL-TALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFI 77 (188)
Q Consensus 19 ~~~~~vLeiG~g-~G~~~~~-la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~ 77 (188)
.+..+|+-+|+| .|...+. |+.. . -++++.+|.+. ...+.+.+.+...+-.-+++.+
T Consensus 26 l~~~~VlvvG~GglG~~va~~La~~-G-vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTPAALYLAGA-G-VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHTCEEEEECCSTTHHHHHHHHHHT-T-CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HhcCcEEEEccCHHHHHHHHHHHHc-C-CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 345799999997 3443333 4332 2 36899998753 3455666666665433345554
Q ss_pred EcchH-HHHHHHhhcccCCCceeEEEEeCC
Q 029780 78 ESEAL-SVLDQLLKYSENEGSFDYAFVDAD 106 (188)
Q Consensus 78 ~~d~~-~~~~~~~~~~~~~~~~D~i~id~~ 106 (188)
..... +.+..+. ..+|+|+...+
T Consensus 104 ~~~~~~~~~~~~~------~~~DvVi~~~d 127 (251)
T 1zud_1 104 QQRLTGEALKDAV------ARADVVLDCTD 127 (251)
T ss_dssp CSCCCHHHHHHHH------HHCSEEEECCS
T ss_pred eccCCHHHHHHHH------hcCCEEEECCC
Confidence 43322 2233332 46899986543
No 464
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=87.75 E-value=4 Score=27.07 Aligned_cols=68 Identities=16% Similarity=0.251 Sum_probs=48.7
Q ss_pred CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc--chHHHHHHHH
Q 029780 44 EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLM 118 (188)
Q Consensus 44 ~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~--~~~~~~~~~~ 118 (188)
++.+|..||-++......+..++..|+.. + ....+..+.+..+. ...||+|++|...+ +-.++++.+.
T Consensus 11 k~~rILiVDD~~~~r~~l~~~L~~~G~~~-v-~~a~~g~~al~~~~-----~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRIVKNLLRDLGFNN-T-QEADDGLTALPMLK-----KGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCC-E-EEESSHHHHHHHHH-----HHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCcE-E-EEECCHHHHHHHHH-----hCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 35689999999999999999999988642 2 34566666555443 25799999997543 3456666664
No 465
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.72 E-value=5.5 Score=29.30 Aligned_cols=81 Identities=15% Similarity=0.106 Sum_probs=52.6
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhhc
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLKY 91 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~ 91 (188)
..++++|-.|++.|- +..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|..+. +....+.
T Consensus 9 l~~k~vlVTGas~gI-G~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPAL-GTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHH-HHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456889988886553 33333322 126799999999988887777776654 4688888876431 2222222
Q ss_pred ccCCCceeEEEEeC
Q 029780 92 SENEGSFDYAFVDA 105 (188)
Q Consensus 92 ~~~~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 86 ---~g~id~lv~nA 96 (264)
T 3ucx_A 86 ---YGRVDVVINNA 96 (264)
T ss_dssp ---TSCCSEEEECC
T ss_pred ---cCCCcEEEECC
Confidence 46899998764
No 466
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=87.69 E-value=6.2 Score=31.36 Aligned_cols=90 Identities=19% Similarity=0.054 Sum_probs=53.1
Q ss_pred CEEEEEcccchHHHHHHHhhCCC-C---CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCC
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPE-D---GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENE 95 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~-~---~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~ 95 (188)
++|+-+|+ |..+..+++.+.. + .+|+.++.+++..+...+.+...+ ..++..+..|..+ .+.++.++
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~---- 74 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINE---- 74 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHh----
Confidence 46888888 4566665554422 2 389999999887776666554432 1346777777643 33343321
Q ss_pred CceeEEEEeCCccchHHHHHHHH
Q 029780 96 GSFDYAFVDADKDNYCNYHERLM 118 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~ 118 (188)
...|+|+..........+.+.+.
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~l 97 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEACL 97 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHHHH
Confidence 24899987765443344444443
No 467
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.21 E-value=3.2 Score=30.99 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=50.1
Q ss_pred HcCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH------HHHHhh
Q 029780 18 LVNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV------LDQLLK 90 (188)
Q Consensus 18 ~~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~ 90 (188)
+..++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++..|..+. +....+
T Consensus 21 m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp ----CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 445678998887655 333333333 126799999999888877777666544 4688888876431 222211
Q ss_pred cccCCCceeEEEEeC
Q 029780 91 YSENEGSFDYAFVDA 105 (188)
Q Consensus 91 ~~~~~~~~D~i~id~ 105 (188)
. .+.+|+++..+
T Consensus 98 ~---~g~id~lv~nA 109 (279)
T 3sju_A 98 R---FGPIGILVNSA 109 (279)
T ss_dssp H---HCSCCEEEECC
T ss_pred H---cCCCcEEEECC
Confidence 1 36789998764
No 468
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=87.06 E-value=2.9 Score=31.57 Aligned_cols=34 Identities=9% Similarity=0.099 Sum_probs=27.0
Q ss_pred CceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 96 GSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 96 ~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
..+|+||+.-........++.+.+.++++..++.
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEE
Confidence 5799999987666677888888888888776665
No 469
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=86.61 E-value=1.6 Score=35.24 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=55.5
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhc-----ccC
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKY-----SEN 94 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~ 94 (188)
+..+--||+ |+.+..+|..+. .+-+|+++|.+++.++..++. ..+ +..-...+.+.+.... ..+
T Consensus 11 ~~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g-----~~p---i~epgl~~ll~~~~~~g~l~~ttd 80 (431)
T 3ojo_A 11 GSKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNG-----QIS---IEEPGLQEVYEEVLSSGKLKVSTT 80 (431)
T ss_dssp -CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-----CCS---SCCTTHHHHHHHHHHTTCEEEESS
T ss_pred CCccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCC-----CCC---cCCCCHHHHHHhhcccCceEEeCc
Confidence 445666676 444444444332 156899999999988766542 111 1111111121110000 001
Q ss_pred CCceeEEEEeCCcc------------chHHHHHHHHhccCcCeEEEEeccccCc
Q 029780 95 EGSFDYAFVDADKD------------NYCNYHERLMKLLKVGGIAVYDNTLWGG 136 (188)
Q Consensus 95 ~~~~D~i~id~~~~------------~~~~~~~~~~~~L~~gG~lv~~~~~~~g 136 (188)
...-|+||+.-+.+ ......+.+.+.|++|.++|......+|
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pg 134 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPK 134 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTT
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChh
Confidence 23578898863221 1344557778899999888776555433
No 470
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.47 E-value=1.5 Score=38.15 Aligned_cols=60 Identities=12% Similarity=-0.116 Sum_probs=43.7
Q ss_pred CEEEEEcccchHHHHHHHhhCCC-C---CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHH
Q 029780 22 KKTIEIGVFTGYSLLLTALTIPE-D---GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~~-~---~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.+|||+.||.|..+.-|..+... + -.+.++|+++.+++..+.|+ +...+++.|..++.+.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh------p~~~~~~~di~~i~~~ 276 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH------PQTEVRNEKADEFLAL 276 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC------TTSEEEESCHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC------CCCceecCcHHHhhhh
Confidence 47999999999988887664200 0 25789999999888887775 2356778888776543
No 471
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=86.44 E-value=4.5 Score=25.60 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=50.7
Q ss_pred CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCcc--chHHHHHHHHhccC
Q 029780 45 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADKD--NYCNYHERLMKLLK 122 (188)
Q Consensus 45 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~~--~~~~~~~~~~~~L~ 122 (188)
..+|..+|-++......++.+...|+. +. ...+..+.+..+. ...+|+|++|.... +..++++.+.+.-.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~a~~~l~-----~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGAT--TV-LAADGVDALELLG-----GFTPDLMICDIAMPRMNGLKLLEHIRNRGD 78 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCE--EE-EESCHHHHHHHHT-----TCCCSEEEECCC-----CHHHHHHHHHTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCce--EE-EeCCHHHHHHHHh-----cCCCCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 568999999999999999988887742 32 3556666655542 46799999996432 33566666655433
Q ss_pred cCeEEEEe
Q 029780 123 VGGIAVYD 130 (188)
Q Consensus 123 ~gG~lv~~ 130 (188)
.--++++.
T Consensus 79 ~~~ii~~t 86 (130)
T 3eod_A 79 QTPVLVIS 86 (130)
T ss_dssp CCCEEEEE
T ss_pred CCCEEEEE
Confidence 33345543
No 472
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.35 E-value=10 Score=29.56 Aligned_cols=57 Identities=16% Similarity=0.055 Sum_probs=34.4
Q ss_pred CCCEEEEEcccc-hHHHH-HHHhhCCCCCEEEEEeCCc-------------------hhHHHHHHHHHhcCCCCcEEEEE
Q 029780 20 NAKKTIEIGVFT-GYSLL-LTALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFIE 78 (188)
Q Consensus 20 ~~~~vLeiG~g~-G~~~~-~la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~~ 78 (188)
+..+|+-+|+|. |...+ .|+.. . -++++.+|.+. ...+.+++.+...+-.-+++.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~a-G-Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~ 110 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAW-G-VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 110 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-T-CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHc-C-CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence 457899999973 44333 33332 2 47999998754 34566777777655333344444
No 473
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.31 E-value=6.7 Score=28.34 Aligned_cols=83 Identities=13% Similarity=0.123 Sum_probs=51.8
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cCC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 95 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~~ 95 (188)
+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++..|..+. +..+.+.. ...
T Consensus 4 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578888886544 444444333 126799999999988887777776654 3588888876431 22221110 124
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
+.+|.++..+
T Consensus 81 ~~id~li~~A 90 (247)
T 3lyl_A 81 LAIDILVNNA 90 (247)
T ss_dssp CCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 6799998764
No 474
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.30 E-value=8.2 Score=28.44 Aligned_cols=112 Identities=17% Similarity=0.188 Sum_probs=61.9
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCC-chhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-c
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVN-RETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-E 93 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~-~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~ 93 (188)
..++++|-.|++.| .+..+++.+ ..+.+|+.++.+ ++..+...+.+...+ .++.++..|..+. +..+.+.. .
T Consensus 16 l~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35678888887654 334444333 126788887764 455555555565544 4688888876431 22221110 0
Q ss_pred CCCceeEEEEeCCc-----------cch-----------HHHHHHHHhccCcCeEEEEeccc
Q 029780 94 NEGSFDYAFVDADK-----------DNY-----------CNYHERLMKLLKVGGIAVYDNTL 133 (188)
Q Consensus 94 ~~~~~D~i~id~~~-----------~~~-----------~~~~~~~~~~L~~gG~lv~~~~~ 133 (188)
..+..|+++..+.. +.. ....+.+.+.++++|.+|+-...
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 13578998865321 011 12345556788888887765443
No 475
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=86.10 E-value=5.5 Score=28.93 Aligned_cols=83 Identities=19% Similarity=0.149 Sum_probs=51.8
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cCC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-ENE 95 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~~ 95 (188)
+++++|-.|+..| .+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++..|..+. +..+.+.. ...
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678888887544 444444433 126799999999988887777766544 4678888876532 22221110 012
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
+.+|.++..+
T Consensus 85 g~id~li~~A 94 (253)
T 3qiv_A 85 GGIDYLVNNA 94 (253)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 5799998764
No 476
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.03 E-value=7.1 Score=29.43 Aligned_cols=89 Identities=7% Similarity=0.020 Sum_probs=50.2
Q ss_pred cCCCEEEEEcccc-hHHHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCc
Q 029780 19 VNAKKTIEIGVFT-GYSLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGS 97 (188)
Q Consensus 19 ~~~~~vLeiG~g~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 97 (188)
.++++|+=+|+|. |......+..+ +.+|+.+|.+++..+.++ ..+ ++....+ + +.++ ...
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~----~~g----~~~~~~~--~-l~~~------l~~ 213 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIA----EMG----MEPFHIS--K-AAQE------LRD 213 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTT----SEEEEGG--G-HHHH------TTT
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHH----HCC----CeecChh--h-HHHH------hcC
Confidence 4678999999852 33333333333 569999999886544332 233 2222211 1 2232 267
Q ss_pred eeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 98 FDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 98 ~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
.|+|+...+..... +.....+++|++++-
T Consensus 214 aDvVi~~~p~~~i~---~~~l~~mk~~~~lin 242 (293)
T 3d4o_A 214 VDVCINTIPALVVT---ANVLAEMPSHTFVID 242 (293)
T ss_dssp CSEEEECCSSCCBC---HHHHHHSCTTCEEEE
T ss_pred CCEEEECCChHHhC---HHHHHhcCCCCEEEE
Confidence 89999875432221 234567899887763
No 477
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=85.84 E-value=5 Score=25.51 Aligned_cols=76 Identities=20% Similarity=0.110 Sum_probs=48.2
Q ss_pred EEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc--cchHHHHHHHHhccCcC
Q 029780 47 QITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKVG 124 (188)
Q Consensus 47 ~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~--~~~~~~~~~~~~~L~~g 124 (188)
+|..+|-++......++.+...++ .+.....+..+.+..+. ...+|+|++|... .+..++++.+.+. .++
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~~~ 74 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVE-----TLKPDIVIIDVDIPGVNGIQVLETLRKR-QYS 74 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE--EEEEEESSSTTHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-TCC
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc--EEEEEcCCHHHHHHHHH-----hcCCCEEEEecCCCCCChHHHHHHHHhc-CCC
Confidence 688899999999999999888763 22223445444444432 2579999999643 3345666777554 344
Q ss_pred e-EEEEe
Q 029780 125 G-IAVYD 130 (188)
Q Consensus 125 G-~lv~~ 130 (188)
. ++++.
T Consensus 75 ~~ii~~s 81 (134)
T 3f6c_A 75 GIIIIVS 81 (134)
T ss_dssp SEEEEEE
T ss_pred CeEEEEe
Confidence 3 44443
No 478
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=85.74 E-value=5.9 Score=28.91 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=50.2
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcch--HH------HHHHHh
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEA--LS------VLDQLL 89 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~------~~~~~~ 89 (188)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+.+.+.+...+. .++.++..|. .+ .+....
T Consensus 10 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 35678888887554 334444333 1367999999998888777666655432 2467777776 21 222222
Q ss_pred hcccCCCceeEEEEeC
Q 029780 90 KYSENEGSFDYAFVDA 105 (188)
Q Consensus 90 ~~~~~~~~~D~i~id~ 105 (188)
+. .+.+|+++..+
T Consensus 88 ~~---~g~id~lv~nA 100 (252)
T 3f1l_A 88 VN---YPRLDGVLHNA 100 (252)
T ss_dssp HH---CSCCSEEEECC
T ss_pred Hh---CCCCCEEEECC
Confidence 22 46899998764
No 479
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=85.55 E-value=5.8 Score=25.98 Aligned_cols=79 Identities=9% Similarity=-0.005 Sum_probs=51.1
Q ss_pred CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc--cchHHHHHHHHhccC
Q 029780 45 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLK 122 (188)
Q Consensus 45 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~--~~~~~~~~~~~~~L~ 122 (188)
..+|..+|-++......++.+...+... +-....+..+.+..+. ...+|+|++|... .+..++++.+.+. .
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~~-~v~~~~~~~~a~~~l~-----~~~~dlii~d~~l~~~~g~~~~~~l~~~-~ 87 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSVN-VVGEADDGAAALELIK-----AHLPDVALLDYRMPGMDGAQVAAAVRSY-E 87 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSEE-EEEEESSHHHHHHHHH-----HHCCSEEEEETTCSSSCHHHHHHHHHHT-T
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCeE-EEEEeCCHHHHHHHHH-----hcCCCEEEEeCCCCCCCHHHHHHHHHhc-C
Confidence 5689999999999999999888876311 2224556655555443 2579999999643 3345666766554 3
Q ss_pred cCe-EEEEe
Q 029780 123 VGG-IAVYD 130 (188)
Q Consensus 123 ~gG-~lv~~ 130 (188)
+.. ++++.
T Consensus 88 ~~~~ii~~s 96 (152)
T 3eul_A 88 LPTRVLLIS 96 (152)
T ss_dssp CSCEEEEEE
T ss_pred CCCeEEEEE
Confidence 443 45444
No 480
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=85.52 E-value=5.1 Score=29.40 Aligned_cols=83 Identities=16% Similarity=0.193 Sum_probs=51.4
Q ss_pred cCCCEEEEEcc-cc--hH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc
Q 029780 19 VNAKKTIEIGV-FT--GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS 92 (188)
Q Consensus 19 ~~~~~vLeiG~-g~--G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~ 92 (188)
.+++++|-.|+ |+ |. .+..+++. +.+|+.++.+++..+...+.+...+ ..++.++..|..+. +..+.+..
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~---G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLE---GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHC---CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHH
Confidence 35678898886 44 33 33334443 6799999999988877777775543 24688888886431 22221110
Q ss_pred -cCCCceeEEEEeC
Q 029780 93 -ENEGSFDYAFVDA 105 (188)
Q Consensus 93 -~~~~~~D~i~id~ 105 (188)
...+.+|+++..+
T Consensus 96 ~~~~g~id~li~~A 109 (266)
T 3o38_A 96 VEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHhCCCcEEEECC
Confidence 0135789998764
No 481
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.46 E-value=5.9 Score=29.48 Aligned_cols=84 Identities=19% Similarity=0.207 Sum_probs=52.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
..++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++..|..+. +..+.+.. ..
T Consensus 30 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 30 LSGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35678888887654 333433333 126799999999988888777776654 3577888876431 22221110 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 107 ~g~iD~lvnnA 117 (276)
T 3r1i_A 107 LGGIDIAVCNA 117 (276)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 35799998764
No 482
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=85.40 E-value=6.1 Score=26.15 Aligned_cols=80 Identities=10% Similarity=0.005 Sum_probs=51.1
Q ss_pred CEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc--cchHHHHHHHHhccCc
Q 029780 46 GQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK--DNYCNYHERLMKLLKV 123 (188)
Q Consensus 46 ~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~--~~~~~~~~~~~~~L~~ 123 (188)
.+|..+|-++......++.+...++ .+.....+..+.+..+... ...+|+|++|... .+..++++.+.+.-..
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~al~~l~~~---~~~~dliilD~~l~~~~g~~~~~~lr~~~~~ 111 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGF--NIIDTAADGEEAVIKYKNH---YPNIDIVTLXITMPKMDGITCLSNIMEFDKN 111 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH---GGGCCEEEECSSCSSSCHHHHHHHHHHHCTT
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc---CCCCCEEEEeccCCCccHHHHHHHHHhhCCC
Confidence 3799999999999999999988764 2322456666655544321 1279999999643 2345666666554333
Q ss_pred CeEEEEe
Q 029780 124 GGIAVYD 130 (188)
Q Consensus 124 gG~lv~~ 130 (188)
--++++.
T Consensus 112 ~~ii~ls 118 (157)
T 3hzh_A 112 ARVIMIS 118 (157)
T ss_dssp CCEEEEE
T ss_pred CcEEEEe
Confidence 3455554
No 483
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=85.36 E-value=9 Score=28.03 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=44.1
Q ss_pred CCCEEEEEccc-chHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 20 NAKKTIEIGVF-TGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 20 ~~~~vLeiG~g-~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
.++++|-.|++ +|..+..+++.+. .+.+|+.++.+++..+.+++..+..+ .+.++..|..+. +..+.+.. ..
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG---GALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999975 1444444443331 26789999988763333333222222 266777775431 22221110 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 84 ~g~iD~lv~~A 94 (261)
T 2wyu_A 84 FGGLDYLVHAI 94 (261)
T ss_dssp HSSEEEEEECC
T ss_pred cCCCCEEEECC
Confidence 25799998764
No 484
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=85.29 E-value=8.6 Score=28.10 Aligned_cols=83 Identities=13% Similarity=0.108 Sum_probs=48.4
Q ss_pred CCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeC-CchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc-cC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDV-NRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS-EN 94 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~-~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~ 94 (188)
++++||-.|+ +|..+..+++.+. .+.+|+.++. +++..+...+.+...+ .++.++.+|..+ .+..+.+.. ..
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4567887776 4555555555442 2678999888 7666665555555544 457888887653 222221100 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|.++..+
T Consensus 97 ~~~~d~vi~~A 107 (274)
T 1ja9_A 97 FGGLDFVMSNS 107 (274)
T ss_dssp HSCEEEEECCC
T ss_pred cCCCCEEEECC
Confidence 25789998653
No 485
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=85.12 E-value=5.6 Score=25.44 Aligned_cols=78 Identities=12% Similarity=-0.098 Sum_probs=51.5
Q ss_pred CCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCceeEEEEeCCc---cchHHHHHHHHhcc
Q 029780 45 DGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSFDYAFVDADK---DNYCNYHERLMKLL 121 (188)
Q Consensus 45 ~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~i~id~~~---~~~~~~~~~~~~~L 121 (188)
..+|..+|-++......+..+...|+ .+.....+..+.+..+. ...+|+|++|... .+..++++.+.+.
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~~a~~~~~-----~~~~dlii~d~~~~~~~~g~~~~~~l~~~- 80 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGY--DVLGVFDNGEEAVRCAP-----DLRPDIALVDIMLCGALDGVETAARLAAG- 80 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH-----HHCCSEEEEESSCCSSSCHHHHHHHHHHH-
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCC--eeEEEECCHHHHHHHHH-----hCCCCEEEEecCCCCCCCHHHHHHHHHhC-
Confidence 46899999999999999998888764 23323566655555443 2469999999643 2445667777655
Q ss_pred CcCeEEEEe
Q 029780 122 KVGGIAVYD 130 (188)
Q Consensus 122 ~~gG~lv~~ 130 (188)
..--++++.
T Consensus 81 ~~~~ii~ls 89 (140)
T 3cg0_A 81 CNLPIIFIT 89 (140)
T ss_dssp SCCCEEEEE
T ss_pred CCCCEEEEe
Confidence 333455554
No 486
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.12 E-value=3.1 Score=31.87 Aligned_cols=87 Identities=14% Similarity=0.016 Sum_probs=53.2
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CC----CEEEEEeCCch--hHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccC
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-ED----GQITAIDVNRE--TYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSEN 94 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~----~~v~~iD~~~~--~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 94 (188)
.+|.=||+| ..+..++..+. .+ ..|+..|.+++ ..+.++ ..| +.+ ..+..+.+
T Consensus 23 mkI~iIG~G--~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~----~~G----~~~-~~~~~e~~--------- 82 (322)
T 2izz_A 23 MSVGFIGAG--QLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR----KMG----VKL-TPHNKETV--------- 82 (322)
T ss_dssp CCEEEESCS--HHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH----HHT----CEE-ESCHHHHH---------
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH----HcC----CEE-eCChHHHh---------
Confidence 468889985 44444333331 13 47899998875 444443 223 332 23333322
Q ss_pred CCceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 95 EGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 95 ~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
...|+||+........+.++.+.+.++++.+++.
T Consensus 83 -~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs 116 (322)
T 2izz_A 83 -QHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVS 116 (322)
T ss_dssp -HHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred -ccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEE
Confidence 3579999987777777888888888888776554
No 487
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=85.08 E-value=2.4 Score=27.63 Aligned_cols=93 Identities=18% Similarity=0.156 Sum_probs=50.7
Q ss_pred CCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCCCc
Q 029780 21 AKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENEGS 97 (188)
Q Consensus 21 ~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~ 97 (188)
.++|+-+|+ |..+..++..+. .+.+|+.+|.+++..+.+++ .+ ...+.+|..+ .+... ....
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~----~~~~~~d~~~~~~l~~~-----~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YA----THAVIANATEENELLSL-----GIRN 70 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TC----SEEEECCTTCHHHHHTT-----TGGG
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hC----CEEEEeCCCCHHHHHhc-----CCCC
Confidence 457899887 666666555442 25679999998765443221 12 3456666543 22221 1257
Q ss_pred eeEEEEeCCcc-chHHHHHHHHhccCcCeEEEE
Q 029780 98 FDYAFVDADKD-NYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 98 ~D~i~id~~~~-~~~~~~~~~~~~L~~gG~lv~ 129 (188)
+|+|++..... ..........+.+.+. .+++
T Consensus 71 ~d~vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~ 102 (144)
T 2hmt_A 71 FEYVIVAIGANIQASTLTTLLLKELDIP-NIWV 102 (144)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHTTCS-EEEE
T ss_pred CCEEEECCCCchHHHHHHHHHHHHcCCC-eEEE
Confidence 89999875432 2222333344555665 4443
No 488
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.07 E-value=5.5 Score=29.25 Aligned_cols=84 Identities=11% Similarity=0.015 Sum_probs=52.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH--HHHHhhcc-cC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV--LDQLLKYS-EN 94 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~-~~ 94 (188)
.+++++|-.|++. ..+..+++.+ ..+.+|+.++.+++..+...+.+...+ .++.++..|..+. +..+.+.. ..
T Consensus 27 l~~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 3567888888654 4444444433 236799999999988887777776654 4688888876431 22211110 01
Q ss_pred CCceeEEEEeC
Q 029780 95 EGSFDYAFVDA 105 (188)
Q Consensus 95 ~~~~D~i~id~ 105 (188)
.+.+|.++..+
T Consensus 104 ~g~id~lv~~A 114 (262)
T 3rkr_A 104 HGRCDVLVNNA 114 (262)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 35789998764
No 489
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=85.06 E-value=9.8 Score=28.20 Aligned_cols=80 Identities=15% Similarity=0.129 Sum_probs=45.6
Q ss_pred CCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchh-HHHHHHHHHhcCCCCcEEEEEcchHH------HHHHHhhc
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRET-YEIGLPIIKKAGVDHKINFIESEALS------VLDQLLKY 91 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~-~~~a~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~~ 91 (188)
+++++|-.|++. ..+..+++.+. .+.+|+.++.+++. .+.+.+.+...+ .++.++..|..+ .+....+.
T Consensus 28 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGAGR-GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456788777654 44455444432 36789999887643 344444444443 357788877543 11222111
Q ss_pred ccCCCceeEEEEeC
Q 029780 92 SENEGSFDYAFVDA 105 (188)
Q Consensus 92 ~~~~~~~D~i~id~ 105 (188)
.+.+|+++..+
T Consensus 105 ---~g~iD~lv~~A 115 (283)
T 1g0o_A 105 ---FGKLDIVCSNS 115 (283)
T ss_dssp ---HSCCCEEEECC
T ss_pred ---cCCCCEEEECC
Confidence 25789998764
No 490
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=85.05 E-value=9.4 Score=28.41 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=52.2
Q ss_pred CCEEEEEcccc-hH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHHhhcccCCCce
Q 029780 21 AKKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQLLKYSENEGSF 98 (188)
Q Consensus 21 ~~~vLeiG~g~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 98 (188)
..+|.=||+|. |. .+..++..-. +.+|+++|.+++..+.+++ .+... . ...+..+. ....
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~----~g~~~--~-~~~~~~~~----------~~~a 67 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHP-HYKIVGYNRSDRSRDIALE----RGIVD--E-ATADFKVF----------AALA 67 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSHHHHHHHHH----TTSCS--E-EESCTTTT----------GGGC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCC-CcEEEEEcCCHHHHHHHHH----cCCcc--c-ccCCHHHh----------hcCC
Confidence 35788899864 22 2222333211 4589999999887665543 33211 1 12222111 1357
Q ss_pred eEEEEeCCccchHHHHHHHHhc-cCcCeEEE
Q 029780 99 DYAFVDADKDNYCNYHERLMKL-LKVGGIAV 128 (188)
Q Consensus 99 D~i~id~~~~~~~~~~~~~~~~-L~~gG~lv 128 (188)
|+|++..........++.+.+. ++++.+++
T Consensus 68 DvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 68 DVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 8999877666667777777777 88776555
No 491
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=84.97 E-value=3.4 Score=30.89 Aligned_cols=86 Identities=9% Similarity=0.096 Sum_probs=52.0
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHH---HHHHhhcc-c
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALSV---LDQLLKYS-E 93 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~-~ 93 (188)
.+++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+.+.+.+...+ ..++.++..|..+. +..+.+.. .
T Consensus 10 ~~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 35678888887644 444444433 236799999999888777777666544 24688888776432 22221100 0
Q ss_pred CCCceeEEEEeCC
Q 029780 94 NEGSFDYAFVDAD 106 (188)
Q Consensus 94 ~~~~~D~i~id~~ 106 (188)
..+.+|+++..+.
T Consensus 88 ~~g~iD~lv~nAg 100 (311)
T 3o26_A 88 HFGKLDILVNNAG 100 (311)
T ss_dssp HHSSCCEEEECCC
T ss_pred hCCCCCEEEECCc
Confidence 1358999998754
No 492
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=84.96 E-value=9.8 Score=28.30 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=47.3
Q ss_pred CCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCc-hhHHHHHHHHH-hcCCCCcEEEEEcchHH------HHHHHhh
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNR-ETYEIGLPIIK-KAGVDHKINFIESEALS------VLDQLLK 90 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~-~~~~~a~~~~~-~~~~~~~~~~~~~d~~~------~~~~~~~ 90 (188)
.++++|-.|++.| .+..+++.+. .+.+|+.++.++ +..+.+.+.+. ..+ .++.++..|..+ .+..+.+
T Consensus 22 ~~k~~lVTGas~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 22 EAPAAVVTGAAKR-IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS--NTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC--CceEEEEeecCCccCCHHHHHHHHH
Confidence 4578888886544 4444443331 267999999987 66665555554 333 457788777543 1222211
Q ss_pred cc-cCCCceeEEEEeC
Q 029780 91 YS-ENEGSFDYAFVDA 105 (188)
Q Consensus 91 ~~-~~~~~~D~i~id~ 105 (188)
.. ...+.+|+++..+
T Consensus 99 ~~~~~~g~iD~lvnnA 114 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNA 114 (288)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 00 0135789998764
No 493
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=84.93 E-value=7.7 Score=31.62 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=55.9
Q ss_pred CEEEEEcccc-hH-HHHHHHhhCCCCCEEEEEeCCchhHHHHHHH------------HHhcCCCCcEEEEEcchHHHHHH
Q 029780 22 KKTIEIGVFT-GY-SLLLTALTIPEDGQITAIDVNRETYEIGLPI------------IKKAGVDHKINFIESEALSVLDQ 87 (188)
Q Consensus 22 ~~vLeiG~g~-G~-~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~------------~~~~~~~~~~~~~~~d~~~~~~~ 87 (188)
.+|.-||+|. |. .+..+++..+ +.+|+++|.+++.++..++. +... ...++.+ ..|..+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~-g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~-~~~~l~~-t~~~~~~~-- 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCP-HITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAA-RGRNLFF-SSDIPKAI-- 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCT-TSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHH-BTTTEEE-ESCHHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCC-CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHh-hcCCEEE-ECCHHHHh--
Confidence 4788899863 22 3334444422 46899999999877655431 0000 0112222 22322221
Q ss_pred HhhcccCCCceeEEEEeCCc-c--------------chHHHHHHHHhccCcCeEEEEecccc
Q 029780 88 LLKYSENEGSFDYAFVDADK-D--------------NYCNYHERLMKLLKVGGIAVYDNTLW 134 (188)
Q Consensus 88 ~~~~~~~~~~~D~i~id~~~-~--------------~~~~~~~~~~~~L~~gG~lv~~~~~~ 134 (188)
...|+||+.... . .....++.+.+.+++|.++|......
T Consensus 85 --------~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~ 138 (481)
T 2o3j_A 85 --------AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVP 138 (481)
T ss_dssp --------HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred --------hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 347899987321 1 14566777888899988777644443
No 494
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=84.75 E-value=3 Score=31.15 Aligned_cols=84 Identities=12% Similarity=0.096 Sum_probs=51.9
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcccCC
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYSENE 95 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~ 95 (188)
..++++|-.|++.| .+..+++.+ ..+.+|+.++.+++..+.+.+.+...+ .++.++..|..+ ....+.+.....
T Consensus 31 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 31 LRGRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 45678888886544 344444333 136799999999988877777766644 468888887643 122221110012
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
+.+|+++..+
T Consensus 108 g~iD~lvnnA 117 (275)
T 4imr_A 108 APVDILVINA 117 (275)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 6799998764
No 495
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.74 E-value=5.9 Score=29.72 Aligned_cols=94 Identities=10% Similarity=-0.027 Sum_probs=54.5
Q ss_pred CEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEE--------cchHHHHHHHhhcc
Q 029780 22 KKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIE--------SEALSVLDQLLKYS 92 (188)
Q Consensus 22 ~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~--------~d~~~~~~~~~~~~ 92 (188)
.+|.=||+| ..+..++..+. .+.+|+.+|.+++.++..++. +. .... -+..+. .+..+
T Consensus 4 m~i~iiG~G--~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~~-~~~~~-- 70 (316)
T 2ew2_A 4 MKIAIAGAG--AMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN----GL----IADFNGEEVVANLPIFSP-EEIDH-- 70 (316)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH----CE----EEEETTEEEEECCCEECG-GGCCT--
T ss_pred CeEEEECcC--HHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC----CE----EEEeCCCeeEecceeecc-hhhcc--
Confidence 468888885 43334443331 156899999998876655543 21 1111 000000 01100
Q ss_pred cCCCceeEEEEeCCccchHHHHHHHHhccCcCeEEEE
Q 029780 93 ENEGSFDYAFVDADKDNYCNYHERLMKLLKVGGIAVY 129 (188)
Q Consensus 93 ~~~~~~D~i~id~~~~~~~~~~~~~~~~L~~gG~lv~ 129 (188)
.....|+||+..........++.+.+.++++..++.
T Consensus 71 -~~~~~d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 71 -QNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp -TSCCCSEEEECSCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred -cCCCCCEEEEEeccccHHHHHHHHHHhcCCCCEEEE
Confidence 012789999987666667788888888888877665
No 496
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=84.73 E-value=8.7 Score=29.78 Aligned_cols=72 Identities=15% Similarity=0.081 Sum_probs=40.5
Q ss_pred cCCCEEEEEcccchHHHHHHHhhC---------CCCCEEEE-EeCCchhHHHHHHHHHhcCCCCcEEEEEcchHHHHHHH
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTI---------PEDGQITA-IDVNRETYEIGLPIIKKAGVDHKINFIESEALSVLDQL 88 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~---------~~~~~v~~-iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 88 (188)
.++.+|-=|||| ..+...+..+ .++.++++ +|.+++..+.+.+.+ +.+ -.-.|..+.+.
T Consensus 23 MkkirvgiIG~G--~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~---g~~----~~y~d~~ell~-- 91 (393)
T 4fb5_A 23 MKPLGIGLIGTG--YMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF---GFE----KATADWRALIA-- 91 (393)
T ss_dssp -CCCEEEEECCS--HHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH---TCS----EEESCHHHHHH--
T ss_pred CCCccEEEEcCC--HHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh---CCC----eecCCHHHHhc--
Confidence 356799999996 3333222211 12567666 588888766555443 432 23456655554
Q ss_pred hhcccCCCceeEEEEeCCc
Q 029780 89 LKYSENEGSFDYAFVDADK 107 (188)
Q Consensus 89 ~~~~~~~~~~D~i~id~~~ 107 (188)
...+|+|++..+.
T Consensus 92 ------~~~iDaV~IatP~ 104 (393)
T 4fb5_A 92 ------DPEVDVVSVTTPN 104 (393)
T ss_dssp ------CTTCCEEEECSCG
T ss_pred ------CCCCcEEEECCCh
Confidence 3689999987543
No 497
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=84.71 E-value=11 Score=31.92 Aligned_cols=58 Identities=16% Similarity=0.066 Sum_probs=35.9
Q ss_pred cCCCEEEEEcccc-hHHHHH-HHhhCCCCCEEEEEeCCc-------------------hhHHHHHHHHHhcCCCCcEEEE
Q 029780 19 VNAKKTIEIGVFT-GYSLLL-TALTIPEDGQITAIDVNR-------------------ETYEIGLPIIKKAGVDHKINFI 77 (188)
Q Consensus 19 ~~~~~vLeiG~g~-G~~~~~-la~~~~~~~~v~~iD~~~-------------------~~~~~a~~~~~~~~~~~~~~~~ 77 (188)
.+..+|+-+|||. |...+. |+.. . -++++.+|.+. ...+.+++.+.+.+-.-+++.+
T Consensus 324 L~~arVLIVGaGGLGs~vA~~La~a-G-VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~ 401 (615)
T 4gsl_A 324 IKNTKVLLLGAGTLGCYVSRALIAW-G-VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 401 (615)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHT-T-CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-C-CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence 3456899999973 443333 4432 2 47999999865 3456677777776533345544
Q ss_pred E
Q 029780 78 E 78 (188)
Q Consensus 78 ~ 78 (188)
.
T Consensus 402 ~ 402 (615)
T 4gsl_A 402 K 402 (615)
T ss_dssp C
T ss_pred e
Confidence 4
No 498
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=84.62 E-value=5.5 Score=29.52 Aligned_cols=83 Identities=14% Similarity=0.019 Sum_probs=50.7
Q ss_pred CCCEEEEEcccchHHHHHHHhhC-CCCCEEEEEeCCchhHHHHHHHHHhcCCCCcEEEEEcchHH--HHHHHhhcc-cCC
Q 029780 20 NAKKTIEIGVFTGYSLLLTALTI-PEDGQITAIDVNRETYEIGLPIIKKAGVDHKINFIESEALS--VLDQLLKYS-ENE 95 (188)
Q Consensus 20 ~~~~vLeiG~g~G~~~~~la~~~-~~~~~v~~iD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-~~~ 95 (188)
.++++|-.|++.| .+..+++.+ ..+.+|+.++.+++.++.+.+.+...+ .++.++..|..+ .+..+.+.. ...
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578888887654 333333333 136799999999988887777776654 457778877643 122221110 013
Q ss_pred CceeEEEEeC
Q 029780 96 GSFDYAFVDA 105 (188)
Q Consensus 96 ~~~D~i~id~ 105 (188)
+..|+++..+
T Consensus 80 g~iD~lVnnA 89 (264)
T 3tfo_A 80 GRIDVLVNNA 89 (264)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 6799998764
No 499
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=84.53 E-value=5.1 Score=29.28 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=51.2
Q ss_pred cCCCEEEEEcccchHHHHHHHhhCC-CCCEEEEEeCCchhHHHHHHHHHhcCCC-CcEEEEEcchHH------HHHHHhh
Q 029780 19 VNAKKTIEIGVFTGYSLLLTALTIP-EDGQITAIDVNRETYEIGLPIIKKAGVD-HKINFIESEALS------VLDQLLK 90 (188)
Q Consensus 19 ~~~~~vLeiG~g~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~------~~~~~~~ 90 (188)
..++++|-.|++.| .+..+++.+. .+.+|+.++.+++..+.+.+.+...... .++.++..|..+ .+....+
T Consensus 5 ~~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQG-IGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSH-HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 35678888887655 3333333221 2679999999998887777766654222 457788877643 1222221
Q ss_pred cccCCCceeEEEEeC
Q 029780 91 YSENEGSFDYAFVDA 105 (188)
Q Consensus 91 ~~~~~~~~D~i~id~ 105 (188)
. .+.+|+++..+
T Consensus 84 ~---~g~iD~lvnnA 95 (250)
T 3nyw_A 84 K---YGAVDILVNAA 95 (250)
T ss_dssp H---HCCEEEEEECC
T ss_pred h---cCCCCEEEECC
Confidence 1 36899998764
No 500
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=84.28 E-value=6.3 Score=25.33 Aligned_cols=79 Identities=10% Similarity=0.006 Sum_probs=52.4
Q ss_pred CCEEEEEeCCchhHHHHHHHHHh-cCCCCcEEEEEcchHHHHHHHhhcccCC-CceeEEEEeCCcc---chHHHHHHHHh
Q 029780 45 DGQITAIDVNRETYEIGLPIIKK-AGVDHKINFIESEALSVLDQLLKYSENE-GSFDYAFVDADKD---NYCNYHERLMK 119 (188)
Q Consensus 45 ~~~v~~iD~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~D~i~id~~~~---~~~~~~~~~~~ 119 (188)
..+|..+|-++......++.+.. .++ .+. ...+..+.+..+. . ..+|+|++|.... +..++++.+.+
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~--~v~-~~~~~~~a~~~l~-----~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEY--DFI-EVENLKKFYSIFK-----DLDSITLIIMDIAFPVEKEGLEVLSAIRN 75 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCC--EEE-EECSHHHHHTTTT-----TCCCCSEEEECSCSSSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCc--cEE-EECCHHHHHHHHh-----cCCCCcEEEEeCCCCCCCcHHHHHHHHHh
Confidence 45899999999999999998888 664 233 4556656555442 4 6899999997544 33456666655
Q ss_pred --ccCcCeEEEEec
Q 029780 120 --LLKVGGIAVYDN 131 (188)
Q Consensus 120 --~L~~gG~lv~~~ 131 (188)
....--++++..
T Consensus 76 ~~~~~~~~ii~ls~ 89 (140)
T 3lua_A 76 NSRTANTPVIIATK 89 (140)
T ss_dssp SGGGTTCCEEEEES
T ss_pred CcccCCCCEEEEeC
Confidence 333334555543
Done!