BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029781
MSSISIPSCLTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGV
GITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVG
VVSDYDLLALDSISGSMRKLGFNLYFGFNSGNAYFARWLLKFVGGINCGFLLTVEGAMTA
NIISSFLT

High Scoring Gene Products

Symbol, full name Information P value
LEJ2
AT4G36910
protein from Arabidopsis thaliana 4.2e-31
LEJ1
AT4G34120
protein from Arabidopsis thaliana 1.2e-28
acuB
Acetoin utilization protein AcuB
protein from Carboxydothermus hydrogenoformans Z-2901 4.5e-05
CHY_0173
acetoin utilization protein AcuB
protein from Carboxydothermus hydrogenoformans Z-2901 4.5e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029781
        (188 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2114970 - symbol:LEJ2 "AT4G36910" species:3702...   342  4.2e-31   1
TAIR|locus:2124276 - symbol:LEJ1 "AT4G34120" species:3702...   319  1.2e-28   1
UNIPROTKB|Q3AFN9 - symbol:acuB "Acetoin utilization prote...   113  4.5e-05   1
TIGR_CMR|CHY_0173 - symbol:CHY_0173 "acetoin utilization ...   113  4.5e-05   1


>TAIR|locus:2114970 [details] [associations]
            symbol:LEJ2 "AT4G36910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0045454 "cell redox
            homeostasis" evidence=IDA] InterPro:IPR000644 Pfam:PF00571
            PROSITE:PS51371 SMART:SM00116 GO:GO:0009507 EMBL:CP002687
            GenomeReviews:CT486007_GR eggNOG:COG0517 GO:GO:0045454 EMBL:Z99707
            EMBL:AL161590 EMBL:AY085164 EMBL:BT003835 EMBL:BT005190
            IPI:IPI00526612 PIR:H85435 RefSeq:NP_195409.1 UniGene:At.31287
            UniGene:At.65827 PDB:4GQV PDB:4GQW PDBsum:4GQV PDBsum:4GQW
            ProteinModelPortal:O23193 SMR:O23193 IntAct:O23193 PaxDb:O23193
            PRIDE:O23193 EnsemblPlants:AT4G36910.1 GeneID:829844
            KEGG:ath:AT4G36910 TAIR:At4g36910 HOGENOM:HOG000187907
            InParanoid:O23193 OMA:GRTENSM PhylomeDB:O23193
            ProtClustDB:CLSN2685590 Genevestigator:O23193 Uniprot:O23193
        Length = 236

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 79/138 (57%), Positives = 94/138 (68%)

Query:     5 SIPSCLTLARLNANGVINSVPHLQLPITVAT-PSHLSKRLRFFTVSREVKAFAHNGVG-- 61
             S+P   T  R +++    S P+L LP  ++  P H     R F     + + A +  G  
Sbjct:     7 SVPLSFTPLRASSSP---SSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIPS-ASSAAGST 62

Query:    62 -ITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVG 120
              +TNS  PR+G YTVG+FMTKKEDLH VK TTTVDEALE LVE RITGFPVID+DWKLVG
Sbjct:    63 LMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVG 122

Query:   121 VVSDYDLLALDSISGSMR 138
             +VSDYDLLALDSISGS R
Sbjct:   123 LVSDYDLLALDSISGSGR 140


>TAIR|locus:2124276 [details] [associations]
            symbol:LEJ1 "AT4G34120" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0045454 "cell redox homeostasis" evidence=IDA]
            [GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA]
            InterPro:IPR000644 Pfam:PF00571 PROSITE:PS51371 SMART:SM00116
            GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
            eggNOG:COG0517 GO:GO:0045454 EMBL:AL021961 EMBL:AL161584
            HOGENOM:HOG000187907 ProtClustDB:CLSN2685590 EMBL:AF360331
            EMBL:AY056339 IPI:IPI00529341 PIR:T05424 RefSeq:NP_567952.1
            UniGene:At.27243 UniGene:At.49487 UniGene:At.68482 PDB:3SL7
            PDBsum:3SL7 ProteinModelPortal:Q9C5D0 SMR:Q9C5D0 IntAct:Q9C5D0
            STRING:Q9C5D0 PaxDb:Q9C5D0 PRIDE:Q9C5D0 ProMEX:Q9C5D0
            EnsemblPlants:AT4G34120.1 GeneID:829558 KEGG:ath:AT4G34120
            TAIR:At4g34120 InParanoid:Q9C5D0 OMA:KRETENS PhylomeDB:Q9C5D0
            Genevestigator:Q9C5D0 Uniprot:Q9C5D0
        Length = 238

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 77/142 (54%), Positives = 98/142 (69%)

Query:     1 MSSISIPSCLTLARLNANGVINSVPHLQ-LPITVATPS--HLSKRLRF--FTVSREVKAF 55
             M SIS+ + + + RL    ++ S+ H   LPI+ ++ S   LS R R   F+ S  V AF
Sbjct:     1 MGSISLSNSMPITRLP---LLTSLYHQSFLPISSSSFSLLPLSNRRRSSTFSPSITVSAF 57

Query:    56 --AHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVID 113
               A   V   NSVP +NG YTVGDFMT +++LH VK +T+VD+ALE LVEK++TG PVID
Sbjct:    58 FAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID 117

Query:   114 DDWKLVGVVSDYDLLALDSISG 135
             D+W LVGVVSDYDLLALDSISG
Sbjct:   118 DNWTLVGVVSDYDLLALDSISG 139


>UNIPROTKB|Q3AFN9 [details] [associations]
            symbol:acuB "Acetoin utilization protein AcuB"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006091
            "generation of precursor metabolites and energy" evidence=ISS]
            [GO:0045150 "acetoin catabolic process" evidence=ISS]
            InterPro:IPR000644 InterPro:IPR002912 Pfam:PF00571 Pfam:PF01842
            PROSITE:PS51371 SMART:SM00116 EMBL:CP000141
            GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0006091
            GO:GO:0016597 GO:GO:0045150 RefSeq:YP_359045.1
            ProteinModelPortal:Q3AFN9 STRING:Q3AFN9 GeneID:3726273
            KEGG:chy:CHY_0173 PATRIC:21273531 HOGENOM:HOG000187908 KO:K04767
            OMA:VQTMNPI BioCyc:CHYD246194:GJCN-174-MONOMER Uniprot:Q3AFN9
        Length = 210

 Score = 113 (44.8 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 28/53 (52%), Positives = 36/53 (67%)

Query:    75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
             V D MT+  +L  VK+T T+ EA+ +  EKRI   PV+DD  KLVG+VSD DL
Sbjct:     3 VKDIMTR--ELITVKSTDTIREAMAKGHEKRIRHLPVVDDG-KLVGIVSDRDL 52


>TIGR_CMR|CHY_0173 [details] [associations]
            symbol:CHY_0173 "acetoin utilization protein AcuB"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006091
            "generation of precursor metabolites and energy" evidence=ISS]
            [GO:0045150 "acetoin catabolic process" evidence=ISS]
            InterPro:IPR000644 InterPro:IPR002912 Pfam:PF00571 Pfam:PF01842
            PROSITE:PS51371 SMART:SM00116 EMBL:CP000141
            GenomeReviews:CP000141_GR eggNOG:COG0517 GO:GO:0006091
            GO:GO:0016597 GO:GO:0045150 RefSeq:YP_359045.1
            ProteinModelPortal:Q3AFN9 STRING:Q3AFN9 GeneID:3726273
            KEGG:chy:CHY_0173 PATRIC:21273531 HOGENOM:HOG000187908 KO:K04767
            OMA:VQTMNPI BioCyc:CHYD246194:GJCN-174-MONOMER Uniprot:Q3AFN9
        Length = 210

 Score = 113 (44.8 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 28/53 (52%), Positives = 36/53 (67%)

Query:    75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
             V D MT+  +L  VK+T T+ EA+ +  EKRI   PV+DD  KLVG+VSD DL
Sbjct:     3 VKDIMTR--ELITVKSTDTIREAMAKGHEKRIRHLPVVDDG-KLVGIVSDRDL 52


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      188       188   0.00087  110 3  11 22  0.41    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  151 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.33u 0.10s 17.43t   Elapsed:  00:00:01
  Total cpu time:  17.33u 0.10s 17.43t   Elapsed:  00:00:01
  Start:  Tue May 21 00:17:04 2013   End:  Tue May 21 00:17:05 2013

Back to top