BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029781
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis
thaliana GN=CBSX1 PE=1 SV=2
Length = 236
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/77 (83%), Positives = 69/77 (89%)
Query: 62 ITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGV 121
+TNS PR+G YTVG+FMTKKEDLH VK TTTVDEALE LVE RITGFPVID+DWKLVG+
Sbjct: 64 MTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGL 123
Query: 122 VSDYDLLALDSISGSMR 138
VSDYDLLALDSISGS R
Sbjct: 124 VSDYDLLALDSISGSGR 140
Score = 33.9 bits (76), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
VGD MT V+ T +++A + L+E + PV+D D KLVG+++
Sbjct: 171 VGDLMTPAP--LVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIIT 217
>sp|Q9C5D0|CBSX2_ARATH CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis
thaliana GN=CBSX2 PE=1 SV=1
Length = 238
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
Query: 41 KRLRFFTVSREVKAF--AHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEAL 98
+R F+ S V AF A V NSVP +NG YTVGDFMT +++LH VK +T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 99 ERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
E LVEK++TG PVIDD+W LVGVVSDYDLLALDSISG
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISG 139
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
VGD MT V+ +T +++A L+E + PV+D D KL+G+++
Sbjct: 173 VGDLMTPSP--LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILT 219
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 59 GVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKL 118
G+ + R G TV + MT+ ++ V + V+EAL+ ++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREGR-TVKELMTR--EVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 119 VGVVSDYDLLALDSISGSMR 138
VG+++ DL+A ++R
Sbjct: 194 VGLITMSDLVARKKYKNAVR 213
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 59 GVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKL 118
G+ + R G V + MTK ++ V + V+EAL+ ++E RI PV+D+ KL
Sbjct: 137 GIITKKDIAAREGKL-VKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKL 193
Query: 119 VGVVSDYDLLALDSISGSMR 138
VG+++ DL+A ++R
Sbjct: 194 VGLITMSDLVARKKYKNAVR 213
Score = 30.0 bits (66), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
ED+ + TVD AL + + I G PV++D+ K+VG+++ D+ A
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAA 146
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 60 VGI--TNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK 117
VGI + R G V + MTK D+ V V+EAL+ ++E RI PV+D + +
Sbjct: 136 VGIISKKDIAAREGKL-VKELMTK--DVITVPENIEVEEALKIMIENRIDRLPVVDKEGR 192
Query: 118 LVGVVSDYDLLALDSISGSMR 138
L+G+++ DL+A ++R
Sbjct: 193 LIGLITMSDLVARKKYKNAVR 213
Score = 30.0 bits (66), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
ED+ + TVD AL + + I G PV++++ K+VG++S D+ A
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAA 146
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAHNG-VGITNSVPPRNGTYTVG 76
LP V ++L+KR++ T +R A A G +GI + P
Sbjct: 27 LPHEVDVSTYLTKRIKLNIPIVSAAMDTVTEARLAIALAREGGIGIIHRNLPIKKQAEEV 86
Query: 77 DFMTKKE-----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ + K E + VK T V EAL+ + + +I+G PV+D++ KL+G++++ DL
Sbjct: 87 EKVKKSESGMIINPVTVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDL 142
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 66 VPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDY 125
+ P + + V +FMTK E+L T+DEA E + +I P++D + K+ G+++
Sbjct: 145 IKPEDYSKPVSEFMTK-ENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIK 203
Query: 126 DLL 128
D++
Sbjct: 204 DIV 206
>sp|P44334|IMDH_HAEIN Inosine-5'-monophosphate dehydrogenase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=guaB PE=3
SV=1
Length = 488
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
+ TV MTKKEDL VK + +E LE + + R+ V++D +KL G+++ D
Sbjct: 147 SKTVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKD 201
>sp|P65167|IMDH_MYCTU Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium
tuberculosis GN=guaB PE=1 SV=1
Length = 529
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAH-NGVGITNSVPP-------- 68
+P T T S L+K++R T SR A A G+G+ + P
Sbjct: 60 VPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQV 119
Query: 69 ----RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
R+ V D +T + D T VD R RI+G PV+DDD LVG++++
Sbjct: 120 EMVKRSEAGMVTDPVTCRPD----NTLAQVDALCARF---RISGLPVVDDDGALVGIITN 172
Query: 125 YDL 127
D+
Sbjct: 173 RDM 175
>sp|P65168|IMDH_MYCBO Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=guaB PE=3 SV=1
Length = 529
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAH-NGVGITNSVPP-------- 68
+P T T S L+K++R T SR A A G+G+ + P
Sbjct: 60 VPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQV 119
Query: 69 ----RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
R+ V D +T + D T VD R RI+G PV+DDD LVG++++
Sbjct: 120 EMVKRSEAGMVTDPVTCRPD----NTLAQVDALCARF---RISGLPVVDDDGALVGIITN 172
Query: 125 YDL 127
D+
Sbjct: 173 RDM 175
>sp|A9A5Y7|IMDH_NITMS Inosine-5'-monophosphate dehydrogenase OS=Nitrosopumilus maritimus
(strain SCM1) GN=guaB PE=3 SV=1
Length = 476
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
E+ +++ + ++ +AL+ +K I+G V+D + KLVG+V++ DLL
Sbjct: 94 ENPYSISSDKSIQDALDYAEDKEISGLLVVDSNSKLVGIVTERDLL 139
Score = 35.0 bits (79), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
T+ D MTK D+ K ++DEA + L + RI P++DD + G+++ D+
Sbjct: 146 TIADVMTK--DVVTAKPGVSLDEAKDILHKHRIEKLPIVDDSGIIQGLITSKDI 197
>sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=Bacillus subtilis (strain
168) GN=guaB PE=1 SV=2
Length = 488
Score = 37.4 bits (85), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D MTK E+L TT+DEA + L + +I P++DD KL G+++ D+ +
Sbjct: 153 ISDVMTK-EELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEKVIEFP 211
Query: 135 GSMRKLGFNLYFGFNSG 151
S + + L G G
Sbjct: 212 NSSKDIHGRLIVGAAVG 228
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD-----SISGSMRK 139
V+ V+EA++ +V+K I P++DD+ KL+G+V+ D+L ++ +I M+K
Sbjct: 83 VEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMKK 139
>sp|Q58332|Y922_METJA Uncharacterized protein MJ0922 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0922 PE=1 SV=1
Length = 138
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 7/60 (11%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERL-----VEKRITGFPVIDDDWKLVGVVSDYDLL 128
T+GD MTK D+ + ++ EA++++ E+ I PV+D + KLVG++SD D++
Sbjct: 74 TIGDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDII 131
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
V D MTK ++ K V EA E++++ +I+ PVIDD+ K++G+V+ D+
Sbjct: 10 VKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDI 60
>sp|Q5R4S0|AAKG2_PONAB 5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii
GN=PRKAG2 PE=2 SV=1
Length = 524
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFG 147
+ T + +AL VE+RI+ PV+D+ K+V + S +D++ L + + L +
Sbjct: 394 IHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL-AAEKTYNNLDITVTQA 452
Query: 148 FNSGNAYFARWLLKFVGGINCGFLLTVE 175
+ YF G + C L +E
Sbjct: 453 LQHRSQYFE-------GVVKCNKLEILE 473
>sp|Q9UGJ0|AAKG2_HUMAN 5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens
GN=PRKAG2 PE=1 SV=1
Length = 569
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFG 147
+ T + +AL VE+RI+ PV+D+ K+V + S +D++ L + K NL
Sbjct: 439 IHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL-----AAEKTYNNLDIT 493
Query: 148 FNSGNAYFARWLLKFVGGINCGFLLTVE 175
+ +++ F G + C L +E
Sbjct: 494 VTQALQHRSQY---FEGVVKCNKLEILE 518
>sp|P12904|AAKG_YEAST 5'-AMP-activated protein kinase subunit gamma OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNF4 PE=1
SV=1
Length = 322
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 75 VGDF-MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
+GD + ++++ + + TT V + ++ L + R++ P+ID++ L+ V YD+L L
Sbjct: 188 IGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGL 244
>sp|Q54H97|Y8960_DICDI CBS domain-containing protein DDB_G0289609 OS=Dictyostelium
discoideum GN=DDB_G0289609 PE=2 SV=1
Length = 145
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDS 132
V M+K L + TT+D AL+ L I PV+D+D L G+++D DL LA DS
Sbjct: 5 VKQLMSKS--LFTINLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLATDS 61
>sp|Q3SWY3|IMDH2_BOVIN Inosine-5'-monophosphate dehydrogenase 2 OS=Bos taurus GN=IMPDH2
PE=2 SV=1
Length = 514
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+G+ MTK+EDL T+ EA E L + P+++++ +LV +++ DL
Sbjct: 175 LGEIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNENDELVAIIARTDL 227
>sp|Q91WG5|AAKG2_MOUSE 5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus
GN=Prkag2 PE=1 SV=2
Length = 566
Score = 35.8 bits (81), Expect = 0.18, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
T + +AL VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 440 TPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 478
>sp|P80385|AAKG1_RAT 5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus
norvegicus GN=Prkag1 PE=1 SV=3
Length = 330
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 77 DFMTKK-EDLH--------AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+FM+K E+L V+TTT V AL V+ R++ PV+D+ ++V + S +D+
Sbjct: 186 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 245
Query: 128 LALDSISGSMRKLGFNLYFGFNSGNAYFARWLLKFVGGINCGFLLTVEG 176
+ L + + L ++ + YF G + C T+E
Sbjct: 246 INL-AAEKTYNNLDVSVTKALQHRSHYFE-------GVLKCYLHETLEA 286
>sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1426 PE=4 SV=1
Length = 168
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 69 RNGTYT-VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+N T V D MT+K + K T+++A + +V+ I PV+DD+ L+G+V+ DL
Sbjct: 106 KNALKTKVRDVMTRK--VIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDL 163
Query: 128 L 128
+
Sbjct: 164 I 164
>sp|P12268|IMDH2_HUMAN Inosine-5'-monophosphate dehydrogenase 2 OS=Homo sapiens GN=IMPDH2
PE=1 SV=2
Length = 514
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ MTK+EDL T+ EA E L + P++++D +LV +++ DL
Sbjct: 177 EIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNEDDELVAIIARTDL 227
>sp|Q9L6B7|IMDH_PASMU Inosine-5'-monophosphate dehydrogenase OS=Pasteurella multocida
(strain Pm70) GN=guaB PE=3 SV=1
Length = 487
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS--DY 125
TV DFMT K L VK + DE + R+ V+ DD+KL G+++ DY
Sbjct: 148 TVADFMTPKARLVTVKRNASRDEIFGLMHTHRVEKVLVVSDDFKLKGMITLKDY 201
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMR 138
+D+ V TV EA+ + I+G PV+D++ KLVG+++ D+ A++ + ++
Sbjct: 98 KDVITVSPDDTVGEAINVMETYSISGLPVVDNEDKLVGIITHRDVKAIEDKTKKVK 153
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+ T V D MTK D+ K +EALE + R+ P++DD+ +L+G+++ D+L
Sbjct: 146 EDKTKKVKDVMTK--DVVCAKEDVEEEEALELMYANRVERLPIVDDENRLIGIITLRDIL 203
Query: 129 ALDSISGSMRKLGFNLYFGFNSGNAYFAR 157
+ R L G F R
Sbjct: 204 KRRKYPQAARDKKGRLLVAAACGPHDFER 232
>sp|Q9HLK8|IMDH_THEAC Inosine-5'-monophosphate dehydrogenase OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=guaB PE=3 SV=1
Length = 485
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 26 HLQLPI-TVATPSHLSKRLRFFTVSREVKAFA---HNGVGITNSVPPRNGTYTVGDFMTK 81
H+Q+ + V++P TV+ + A A + +G+ + PR + + +
Sbjct: 41 HIQVKVPIVSSP--------MDTVTEDAMAIAMARYGAIGVIHRNQPREKEVEMVKRVKR 92
Query: 82 KE-----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+E D++ + T ++ A + + I G PV+ DD KLVG+V+ DL
Sbjct: 93 EETIIIRDVYTISPETPIEVARTLMATRNIAGLPVVKDD-KLVGIVTKRDL 142
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V D M + D+ +DEA+E L + RI P++D LVG+++ D++
Sbjct: 150 SVSDVMVR--DVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDIITRQKF 207
Query: 134 SGSMRKLGFNLYFGFNSG 151
+ R L G G
Sbjct: 208 PDASRDSEGQLMVGAAVG 225
>sp|P58108|AAKG1_BOVIN 5'-AMP-activated protein kinase subunit gamma-1 OS=Bos taurus
GN=PRKAG1 PE=2 SV=2
Length = 330
Score = 35.0 bits (79), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 77 DFMTKK-EDLH--------AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+FM+K E+L V+TTT V AL V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 128 LAL 130
+ L
Sbjct: 247 INL 249
>sp|Q58622|Y1225_METJA Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1225 PE=1 SV=1
Length = 280
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA--LDSIS 134
+E++ +K +DEA+E + K + G P+++D+ +L+ ++++ D++ LD I
Sbjct: 91 EENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKID 145
>sp|Q8Z3G6|KDSD_SALTI Arabinose 5-phosphate isomerase KdsD OS=Salmonella typhi GN=kdsD
PE=3 SV=1
Length = 328
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D M +++ V T+ +AL + K + + D+ K+ G+ +D DL + +
Sbjct: 206 VSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRMFDMG 265
Query: 135 GSMRKLGF 142
G MR+LG
Sbjct: 266 GDMRQLGI 273
>sp|P54619|AAKG1_HUMAN 5'-AMP-activated protein kinase subunit gamma-1 OS=Homo sapiens
GN=PRKAG1 PE=1 SV=1
Length = 331
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 77 DFMTKK-EDLH--------AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+FM+K E+L V+TTT V AL V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 128 LAL 130
+ L
Sbjct: 247 INL 249
>sp|O54950|AAKG1_MOUSE 5'-AMP-activated protein kinase subunit gamma-1 OS=Mus musculus
GN=Prkag1 PE=1 SV=2
Length = 330
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
V+TTT V AL V+ R++ PV+D+ ++V + S +D++ L
Sbjct: 206 VRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINL 248
>sp|Q9KGN8|IMDH_BACHD Inosine-5'-monophosphate dehydrogenase OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=guaB PE=3 SV=1
Length = 485
Score = 35.0 bits (79), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 105 RITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
RI+G P++D+D KLVG++++ DL ++ S
Sbjct: 119 RISGVPIVDEDQKLVGILTNRDLRFIEDYS 148
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ D MTK E+L TT+ EA E L + +I P++D+ L G+++ D+
Sbjct: 151 IDDVMTK-ENLVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202
>sp|Q09138|AAKG1_PIG 5'-AMP-activated protein kinase subunit gamma-1 OS=Sus scrofa
GN=PRKAG1 PE=1 SV=2
Length = 330
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 77 DFMTKK-EDLH--------AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+FM+K E+L V+TTT V AL V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 128 LAL 130
+ L
Sbjct: 247 INL 249
>sp|Q8ZLS1|KDSD_SALTY Arabinose 5-phosphate isomerase KdsD OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=kdsD PE=3 SV=1
Length = 328
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D M +++ V T+ +AL + K + + D+ K+ G+ +D DL + +
Sbjct: 206 VSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRVFDMG 265
Query: 135 GSMRKLGF 142
G MR+LG
Sbjct: 266 GDMRQLGI 273
>sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1232 PE=4 SV=1
Length = 296
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSI 133
VGD K ++ + T+ E + EK I+G PV+D+D KLVGV+S +D+ +D+I
Sbjct: 172 VGDVGIK--EVWTINPNCTLRETAKLFAEKYISGAPVVDND-KLVGVISLHDIAENIDNI 228
Query: 134 SGSMRKLGFNLYFGFNSGNAYFARWLLKFVGGINCGFLLTVE 175
++++ + + LK + N G L+ V+
Sbjct: 229 DKKVKEVMRRDVITIHKDEKIYD--ALKIMNKNNVGRLVIVD 268
>sp|Q0WD32|IMDH_YERPE Inosine-5'-monophosphate dehydrogenase OS=Yersinia pestis GN=guaB
PE=3 SV=1
Length = 487
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
MT KE L VK T + L+++ EKR+ V+DD + L G+++ D
Sbjct: 153 MTPKERLVTVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKD 200
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 86 HAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
V TTT+ + E G+PV+ +D++LVG+++ D+
Sbjct: 98 QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDV 139
>sp|P31435|YICJ_ECOLI Inner membrane symporter YicJ OS=Escherichia coli (strain K12)
GN=yicJ PE=1 SV=2
Length = 460
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSM 137
F T KE + A TTT++ E L + + +D W++VG+++ +++LA+ G+M
Sbjct: 201 FFTTKERVEAPPTTTSMREDLRDIWQ---------NDQWRIVGLLTIFNILAVCVRGGAM 251
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
K D V T + + E +E +VE+ I V+D+D ++VG+VS+ +++L
Sbjct: 90 KYDPPYVYTRSDLREVIELMVERGIGALAVVDEDLRVVGIVSERHVISL 138
>sp|P0ADG9|IMDH_SHIFL Inosine-5'-monophosphate dehydrogenase OS=Shigella flexneri GN=guaB
PE=3 SV=1
Length = 488
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
+MT KE L V+ + L ++ EKR+ V+DD++ L+G+++ D
Sbjct: 152 YMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKD 200
>sp|P0ADG7|IMDH_ECOLI Inosine-5'-monophosphate dehydrogenase OS=Escherichia coli (strain
K12) GN=guaB PE=1 SV=1
Length = 488
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
+MT KE L V+ + L ++ EKR+ V+DD++ L+G+++ D
Sbjct: 152 YMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKD 200
>sp|P0ADG8|IMDH_ECO57 Inosine-5'-monophosphate dehydrogenase OS=Escherichia coli O157:H7
GN=guaB PE=3 SV=1
Length = 488
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
+MT KE L V+ + L ++ EKR+ V+DD++ L+G+++ D
Sbjct: 152 YMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKD 200
>sp|Q8BGM7|AAKG3_MOUSE 5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus
GN=Prkag3 PE=1 SV=1
Length = 489
Score = 33.9 bits (76), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
DL V T V AL+ V++R++ PV+++ ++VG+ S +D++ L
Sbjct: 358 DLAVVLETAPVLTALDIFVDRRVSALPVVNESGQVVGLYSRFDVIHL 404
>sp|Q2LL38|AAKG3_BOVIN 5'-AMP-activated protein kinase subunit gamma-3 OS=Bos taurus
GN=PRKAG3 PE=2 SV=2
Length = 497
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
DL V T + AL+ V++R++ PVI++ ++VG+ S +D++ L
Sbjct: 366 DLAVVLETAPILTALDIFVDRRVSALPVINEAGQVVGLYSRFDVIHL 412
>sp|Q9MYP4|AAKG3_PIG 5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa
GN=PRKAG3 PE=1 SV=2
Length = 514
Score = 33.5 bits (75), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFN 143
DL V T + AL+ V++R++ PV+++ ++VG+ S +D++ L + + +N
Sbjct: 383 DLAVVLETAPILTALDIFVDRRVSALPVVNETGQVVGLYSRFDVIHLAA------QQTYN 436
Query: 144 LYFGFNSGNAYFARWLLKFVGGINC 168
+ N G A R L G ++C
Sbjct: 437 -HLDMNVGEALRQRTLC-LEGVLSC 459
>sp|P24547|IMDH2_MOUSE Inosine-5'-monophosphate dehydrogenase 2 OS=Mus musculus GN=Impdh2
PE=1 SV=2
Length = 514
Score = 33.5 bits (75), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ MTK+EDL T+ EA E L + P+++++ +LV +++ DL
Sbjct: 177 EIMTKREDLVVAPAGVTLKEANEILQRSKKGKLPIVNENDELVAIIARTDL 227
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 33.5 bits (75), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
VGD MT++ L V T V A++ + + RI PVI D ++G+VS D++
Sbjct: 132 VGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDK-GMIGMVSIGDVV 184
>sp|P50097|IMDH_TRIFO Inosine-5'-monophosphate dehydrogenase OS=Tritrichomonas foetus
GN=IMPDH PE=1 SV=1
Length = 503
Score = 33.5 bits (75), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVV--SDYD 126
V D MT L T + EA + + EK++ P+IDDD L +V DYD
Sbjct: 163 VSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYD 216
>sp|Q9M1T1|SETH3_ARATH Probable arabinose 5-phosphate isomerase OS=Arabidopsis thaliana
GN=SETH3 PE=2 SV=1
Length = 350
Score = 33.5 bits (75), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 48 VSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRIT 107
+S+E A H I S+ + V D M K+E+L K + + L L K
Sbjct: 203 LSKEEYAANHPAGRIGKSL-----IFKVKDVMKKQEELPVCKEGDLIMDQLVELTSKGCG 257
Query: 108 GFPVIDDDWKLVGVVSDYDL 127
V+D+ +L+G +D DL
Sbjct: 258 CLLVVDEHSRLIGTFTDGDL 277
>sp|P12269|IMDH2_CRIGR Inosine-5'-monophosphate dehydrogenase 2 OS=Cricetulus griseus
GN=IMPDH2 PE=1 SV=1
Length = 514
Score = 33.1 bits (74), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ MTK+EDL T+ EA E L + P+++++ +LV +++ DL
Sbjct: 177 EIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNENDELVAIIARTDL 227
>sp|B0UXP9|IMDH2_DANRE Inosine-5'-monophosphate dehydrogenase 2 OS=Danio rerio GN=impdh2
PE=2 SV=1
Length = 514
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ MTK+EDL T+ EA E L + P+++++ LV +++ DL
Sbjct: 177 EVMTKREDLVVAPAGVTLKEANEILQRSKKGKLPIVNEEGCLVAIIARTDL 227
>sp|E9PU28|IMDH2_RAT Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus
GN=Impdh2 PE=3 SV=1
Length = 514
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
+ MTK+EDL T+ EA E L + P++++ +LV +++ DL
Sbjct: 177 EIMTKREDLVVAPAGVTLKEANEILQRSKKGKLPIVNESDELVAIIARTDL 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,402,728
Number of Sequences: 539616
Number of extensions: 2831364
Number of successful extensions: 6304
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 6172
Number of HSP's gapped (non-prelim): 150
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)