Query 029781
Match_columns 188
No_of_seqs 262 out of 2556
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 05:09:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kh5_A Protein MJ1225; AMPK, A 99.9 6.6E-21 2.2E-25 147.0 13.2 173 4-185 18-196 (280)
2 3ddj_A CBS domain-containing p 99.8 2.5E-21 8.7E-26 150.9 9.9 155 6-185 109-276 (296)
3 3ddj_A CBS domain-containing p 99.8 1.1E-20 3.7E-25 147.3 11.4 165 5-185 35-205 (296)
4 3kh5_A Protein MJ1225; AMPK, A 99.8 7.1E-21 2.4E-25 146.8 9.7 155 6-185 100-272 (280)
5 2yzq_A Putative uncharacterize 99.8 4.4E-20 1.5E-24 142.7 12.8 157 6-185 76-270 (282)
6 2yzq_A Putative uncharacterize 99.8 5.2E-20 1.8E-24 142.3 12.9 152 5-185 16-175 (282)
7 4esy_A CBS domain containing m 99.8 1.2E-19 4.2E-24 130.8 11.9 113 71-185 16-153 (170)
8 3t4n_C Nuclear protein SNF4; C 99.8 4.8E-20 1.6E-24 145.3 9.3 160 6-185 130-311 (323)
9 3nqr_A Magnesium and cobalt ef 99.8 8.6E-19 2.9E-23 120.3 9.6 114 72-185 2-117 (127)
10 3jtf_A Magnesium and cobalt ef 99.8 2E-18 6.7E-23 118.9 11.1 112 72-185 4-117 (129)
11 3lfr_A Putative metal ION tran 99.8 1.3E-18 4.6E-23 120.8 10.3 114 72-185 2-118 (136)
12 3i8n_A Uncharacterized protein 99.8 6.8E-19 2.3E-23 121.3 7.6 115 71-185 4-120 (130)
13 3lv9_A Putative transporter; C 99.8 3.8E-18 1.3E-22 120.0 11.3 116 69-185 19-136 (148)
14 2qrd_G Protein C1556.08C; AMPK 99.8 2.2E-18 7.4E-23 136.4 10.5 160 6-185 125-306 (334)
15 2v8q_E 5'-AMP-activated protei 99.8 4.2E-18 1.4E-22 134.6 10.8 163 6-185 134-314 (330)
16 3hf7_A Uncharacterized CBS-dom 99.8 2.9E-18 9.8E-23 118.3 8.2 113 73-185 2-118 (130)
17 1vr9_A CBS domain protein/ACT 99.7 7.2E-18 2.4E-22 125.9 10.3 140 6-175 29-171 (213)
18 3oi8_A Uncharacterized protein 99.7 9.1E-18 3.1E-22 119.3 10.1 115 70-185 35-151 (156)
19 3kpb_A Uncharacterized protein 99.7 1.3E-17 4.3E-22 113.3 9.9 109 73-185 1-111 (122)
20 3k2v_A Putative D-arabinose 5- 99.7 2.4E-17 8.1E-22 116.1 11.3 114 72-185 27-143 (149)
21 3lhh_A CBS domain protein; str 99.7 1.7E-17 5.9E-22 119.7 10.6 116 69-185 38-155 (172)
22 3gby_A Uncharacterized protein 99.7 1.8E-17 6.2E-22 113.7 10.2 112 71-185 3-117 (128)
23 3k6e_A CBS domain protein; str 99.7 2.5E-17 8.5E-22 117.2 10.1 111 73-185 15-133 (156)
24 4esy_A CBS domain containing m 99.7 2.5E-18 8.6E-23 123.8 4.6 125 5-132 33-161 (170)
25 2o16_A Acetoin utilization pro 99.7 4E-17 1.4E-21 116.4 10.5 112 72-185 4-126 (160)
26 1pbj_A Hypothetical protein; s 99.7 4.2E-17 1.4E-21 111.1 10.2 109 74-185 2-113 (125)
27 3t4n_C Nuclear protein SNF4; C 99.7 2.2E-17 7.5E-22 130.0 9.9 171 7-185 49-239 (323)
28 3ocm_A Putative membrane prote 99.7 4.5E-17 1.5E-21 117.8 10.5 114 70-185 33-148 (173)
29 3fhm_A Uncharacterized protein 99.7 1E-16 3.5E-21 114.8 12.2 118 68-185 19-141 (165)
30 2rih_A Conserved protein with 99.7 1.3E-16 4.4E-21 111.2 11.6 111 72-185 4-119 (141)
31 2v8q_E 5'-AMP-activated protei 99.7 1.4E-17 4.9E-22 131.5 7.5 172 6-185 53-242 (330)
32 1y5h_A Hypothetical protein RV 99.7 4.4E-17 1.5E-21 112.3 8.8 112 72-185 7-122 (133)
33 2yzi_A Hypothetical protein PH 99.7 2.9E-16 9.8E-21 108.9 12.8 112 71-185 5-120 (138)
34 3oco_A Hemolysin-like protein 99.7 2.8E-17 9.7E-22 116.3 7.8 114 71-185 18-134 (153)
35 2ef7_A Hypothetical protein ST 99.7 1.6E-16 5.4E-21 109.5 11.3 111 72-185 3-116 (133)
36 3fv6_A YQZB protein; CBS domai 99.7 2.3E-16 7.9E-21 112.2 12.4 113 70-185 14-135 (159)
37 2rc3_A CBS domain; in SITU pro 99.7 2.1E-16 7.1E-21 109.3 11.5 110 73-185 6-122 (135)
38 3lfr_A Putative metal ION tran 99.7 8.8E-17 3E-21 111.6 9.6 103 5-132 20-126 (136)
39 4gqw_A CBS domain-containing p 99.7 1.2E-16 4E-21 112.3 10.2 114 72-185 4-134 (152)
40 3nqr_A Magnesium and cobalt ef 99.7 8.6E-17 2.9E-21 110.2 9.3 101 5-131 20-124 (127)
41 3ctu_A CBS domain protein; str 99.7 1.6E-16 5.6E-21 112.5 10.4 112 72-185 14-133 (156)
42 3k6e_A CBS domain protein; str 99.7 7.3E-18 2.5E-22 120.0 3.2 107 5-132 32-141 (156)
43 2p9m_A Hypothetical protein MJ 99.7 2.6E-16 8.9E-21 109.0 11.0 113 71-185 6-127 (138)
44 1pvm_A Conserved hypothetical 99.7 3.3E-16 1.1E-20 114.1 12.0 112 72-185 8-124 (184)
45 3lqn_A CBS domain protein; csg 99.7 1.4E-16 4.8E-21 112.1 9.7 113 71-185 13-134 (150)
46 3jtf_A Magnesium and cobalt ef 99.7 2.1E-16 7E-21 108.7 9.9 100 5-132 22-125 (129)
47 3gby_A Uncharacterized protein 99.7 4.2E-17 1.5E-21 111.9 6.4 104 5-132 20-125 (128)
48 2pfi_A Chloride channel protei 99.7 3.2E-16 1.1E-20 111.5 10.0 114 70-185 10-138 (164)
49 3i8n_A Uncharacterized protein 99.7 7.7E-17 2.6E-21 110.9 6.5 101 5-131 23-127 (130)
50 3kxr_A Magnesium transporter, 99.7 8.5E-16 2.9E-20 114.0 12.6 110 70-185 51-165 (205)
51 1o50_A CBS domain-containing p 99.7 3.6E-16 1.2E-20 110.9 10.1 113 69-185 12-144 (157)
52 2j9l_A Chloride channel protei 99.7 3E-16 1E-20 113.9 9.7 114 70-185 8-156 (185)
53 3sl7_A CBS domain-containing p 99.7 2.3E-16 7.9E-21 114.0 8.8 114 72-185 3-147 (180)
54 2qrd_G Protein C1556.08C; AMPK 99.7 3.5E-16 1.2E-20 123.7 10.6 166 6-185 40-234 (334)
55 3hf7_A Uncharacterized CBS-dom 99.7 1E-16 3.4E-21 110.5 6.4 104 5-132 19-126 (130)
56 3lhh_A CBS domain protein; str 99.7 2E-16 6.9E-21 114.1 8.0 100 6-132 60-163 (172)
57 3kpb_A Uncharacterized protein 99.7 1.5E-16 5.1E-21 108.0 6.7 101 5-132 16-119 (122)
58 3lv9_A Putative transporter; C 99.7 1.4E-16 4.9E-21 111.9 6.5 101 5-132 40-144 (148)
59 4fry_A Putative signal-transdu 99.6 9.1E-16 3.1E-20 108.7 10.3 112 73-185 7-126 (157)
60 2emq_A Hypothetical conserved 99.6 9.1E-16 3.1E-20 108.6 10.0 114 70-185 8-130 (157)
61 4gqw_A CBS domain-containing p 99.6 4.6E-16 1.6E-20 109.2 8.1 119 5-133 22-143 (152)
62 2rih_A Conserved protein with 99.6 4E-16 1.4E-20 108.6 7.5 102 6-132 21-127 (141)
63 2ef7_A Hypothetical protein ST 99.6 3.3E-16 1.1E-20 107.9 6.8 103 6-132 20-124 (133)
64 1yav_A Hypothetical protein BS 99.6 9.1E-16 3.1E-20 109.0 9.1 114 70-185 11-133 (159)
65 2uv4_A 5'-AMP-activated protei 99.6 2.4E-15 8.1E-20 106.1 11.0 112 70-185 20-142 (152)
66 2nyc_A Nuclear protein SNF4; b 99.6 1.9E-15 6.5E-20 105.2 9.8 112 72-185 7-132 (144)
67 3sl7_A CBS domain-containing p 99.6 4.8E-16 1.7E-20 112.3 6.7 126 5-132 21-155 (180)
68 1pbj_A Hypothetical protein; s 99.6 4.4E-16 1.5E-20 106.0 6.1 104 5-132 16-121 (125)
69 3lqn_A CBS domain protein; csg 99.6 7.4E-16 2.5E-20 108.3 7.3 109 5-133 32-143 (150)
70 1vr9_A CBS domain protein/ACT 99.6 4.6E-15 1.6E-19 110.6 11.8 109 71-185 11-121 (213)
71 3oi8_A Uncharacterized protein 99.6 1.3E-15 4.3E-20 108.2 8.3 97 5-128 55-155 (156)
72 3kxr_A Magnesium transporter, 99.6 1.6E-15 5.5E-20 112.5 9.0 100 5-133 69-174 (205)
73 2rc3_A CBS domain; in SITU pro 99.6 6.2E-16 2.1E-20 106.8 6.3 104 6-132 25-130 (135)
74 3oco_A Hemolysin-like protein 99.6 3.5E-16 1.2E-20 110.6 5.1 101 5-132 37-142 (153)
75 3k2v_A Putative D-arabinose 5- 99.6 6.8E-16 2.3E-20 108.6 6.5 102 5-130 45-149 (149)
76 3fv6_A YQZB protein; CBS domai 99.6 6E-16 2E-20 110.1 6.2 107 6-133 32-144 (159)
77 3l2b_A Probable manganase-depe 99.6 3.5E-15 1.2E-19 113.3 10.7 112 72-185 6-235 (245)
78 2p9m_A Hypothetical protein MJ 99.6 7.3E-16 2.5E-20 106.7 6.2 103 6-132 24-135 (138)
79 1y5h_A Hypothetical protein RV 99.6 9.9E-16 3.4E-20 105.5 6.8 104 5-132 23-130 (133)
80 2uv4_A 5'-AMP-activated protei 99.6 1E-15 3.5E-20 108.0 6.8 105 5-131 36-149 (152)
81 2yzi_A Hypothetical protein PH 99.6 1.6E-15 5.4E-20 105.1 7.3 104 6-133 23-129 (138)
82 1pvm_A Conserved hypothetical 99.6 2E-15 6.9E-20 109.9 7.8 105 6-132 25-132 (184)
83 3fhm_A Uncharacterized protein 99.6 1.2E-15 3.9E-20 109.2 6.4 106 5-133 42-150 (165)
84 2d4z_A Chloride channel protei 99.6 1E-14 3.4E-19 111.3 11.9 115 69-185 9-237 (250)
85 2oux_A Magnesium transporter; 99.6 5.6E-15 1.9E-19 114.9 10.5 110 70-185 134-250 (286)
86 4fry_A Putative signal-transdu 99.6 1.3E-15 4.3E-20 108.0 6.1 107 5-134 28-136 (157)
87 2yvy_A MGTE, Mg2+ transporter 99.6 1.5E-14 5.2E-19 111.9 12.2 109 71-185 133-248 (278)
88 2o16_A Acetoin utilization pro 99.6 2E-15 6.9E-20 107.5 5.8 112 5-132 20-134 (160)
89 3ctu_A CBS domain protein; str 99.6 1.6E-15 5.6E-20 107.3 4.9 107 6-133 33-142 (156)
90 2emq_A Hypothetical conserved 99.6 5.9E-15 2E-19 104.4 7.4 109 5-133 28-139 (157)
91 3ocm_A Putative membrane prote 99.6 2.6E-15 8.8E-20 108.5 5.4 100 5-132 53-156 (173)
92 2nyc_A Nuclear protein SNF4; b 99.6 3E-15 1E-19 104.2 5.0 108 5-132 26-140 (144)
93 1yav_A Hypothetical protein BS 99.6 3.5E-15 1.2E-19 106.0 5.4 108 5-132 31-141 (159)
94 3org_A CMCLC; transporter, tra 99.5 7.1E-15 2.4E-19 125.6 7.9 115 71-185 451-616 (632)
95 3l2b_A Probable manganase-depe 99.5 6.9E-15 2.3E-19 111.7 5.6 58 72-131 184-242 (245)
96 2j9l_A Chloride channel protei 99.5 1.2E-14 3.9E-19 105.5 6.3 123 5-133 32-165 (185)
97 2oux_A Magnesium transporter; 99.5 1.6E-14 5.6E-19 112.2 7.5 99 5-132 152-258 (286)
98 1o50_A CBS domain-containing p 99.5 1.9E-14 6.3E-19 102.0 6.9 119 5-132 31-152 (157)
99 3pc3_A CG1753, isoform A; CBS, 99.5 3.3E-14 1.1E-18 119.2 9.5 112 70-185 381-502 (527)
100 3usb_A Inosine-5'-monophosphat 99.5 1.5E-13 5.1E-18 114.6 11.9 102 5-133 128-234 (511)
101 2yvy_A MGTE, Mg2+ transporter 99.5 3E-14 1E-18 110.2 7.0 98 6-132 151-256 (278)
102 2zy9_A Mg2+ transporter MGTE; 99.5 1.7E-13 5.7E-18 113.4 11.3 109 71-185 153-268 (473)
103 2pfi_A Chloride channel protei 99.5 3.7E-14 1.3E-18 100.8 6.0 109 5-133 28-147 (164)
104 1me8_A Inosine-5'-monophosphat 99.5 5.4E-15 1.8E-19 123.2 1.7 141 6-173 113-260 (503)
105 4fxs_A Inosine-5'-monophosphat 99.5 3.5E-14 1.2E-18 118.0 4.9 102 5-132 104-208 (496)
106 4avf_A Inosine-5'-monophosphat 99.5 2.7E-14 9.3E-19 118.5 3.9 101 6-132 104-206 (490)
107 3org_A CMCLC; transporter, tra 99.4 2.4E-13 8.2E-18 116.2 7.3 125 5-132 470-624 (632)
108 2zy9_A Mg2+ transporter MGTE; 99.4 2.5E-13 8.7E-18 112.4 6.5 98 6-132 171-276 (473)
109 4af0_A Inosine-5'-monophosphat 99.4 1E-13 3.4E-18 114.0 3.8 99 5-132 153-257 (556)
110 2d4z_A Chloride channel protei 99.4 8.2E-13 2.8E-17 100.6 7.1 53 77-132 193-245 (250)
111 3usb_A Inosine-5'-monophosphat 99.4 2.5E-12 8.6E-17 107.2 9.5 106 75-185 115-225 (511)
112 3pc3_A CG1753, isoform A; CBS, 99.3 4.9E-13 1.7E-17 112.1 4.1 103 7-134 402-512 (527)
113 4fxs_A Inosine-5'-monophosphat 99.3 9.7E-13 3.3E-17 109.3 5.5 107 74-185 90-200 (496)
114 1vrd_A Inosine-5'-monophosphat 99.3 5.2E-13 1.8E-17 111.1 3.7 102 6-133 111-215 (494)
115 1zfj_A Inosine monophosphate d 99.3 1.6E-11 5.5E-16 102.0 10.9 107 74-185 91-202 (491)
116 1zfj_A Inosine monophosphate d 99.3 3.3E-11 1.1E-15 100.2 12.0 101 6-133 106-211 (491)
117 2cu0_A Inosine-5'-monophosphat 99.2 2.7E-12 9.3E-17 106.6 3.4 96 7-132 110-207 (486)
118 1jcn_A Inosine monophosphate d 99.2 2.2E-12 7.5E-17 107.8 2.5 104 5-132 123-232 (514)
119 1me8_A Inosine-5'-monophosphat 99.2 1E-12 3.5E-17 109.5 0.1 106 76-185 99-212 (503)
120 1vrd_A Inosine-5'-monophosphat 99.2 1.2E-12 4.2E-17 108.9 0.1 107 74-185 96-206 (494)
121 3ghd_A A cystathionine beta-sy 99.2 6.6E-11 2.3E-15 72.5 7.8 63 85-148 2-67 (70)
122 4avf_A Inosine-5'-monophosphat 99.2 2.2E-12 7.4E-17 107.1 0.0 107 73-185 88-198 (490)
123 3fio_A A cystathionine beta-sy 99.1 2.6E-10 8.9E-15 69.4 7.5 63 85-148 2-67 (70)
124 1jcn_A Inosine monophosphate d 99.1 4.7E-12 1.6E-16 105.8 -3.0 109 74-185 109-224 (514)
125 4af0_A Inosine-5'-monophosphat 99.1 1.6E-11 5.5E-16 101.1 0.1 102 78-185 143-249 (556)
126 2cu0_A Inosine-5'-monophosphat 99.0 4.4E-11 1.5E-15 99.3 0.1 104 74-185 94-199 (486)
127 3ghd_A A cystathionine beta-sy 98.8 1E-09 3.5E-14 67.1 1.0 62 5-88 7-70 (70)
128 3fio_A A cystathionine beta-sy 98.1 6.6E-07 2.2E-11 53.9 1.0 61 5-87 7-69 (70)
129 1tif_A IF3-N, translation init 80.5 2.9 9.8E-05 25.3 4.2 31 106-136 13-43 (78)
130 1svj_A Potassium-transporting 54.0 10 0.00035 26.0 3.0 35 94-129 121-155 (156)
131 1p0z_A Sensor kinase CITA; tra 43.2 21 0.0007 23.2 3.1 20 109-128 106-125 (131)
132 3by8_A Sensor protein DCUS; hi 42.4 21 0.00071 23.6 3.1 22 108-129 110-131 (142)
133 2qkp_A Uncharacterized protein 35.5 24 0.00081 23.6 2.5 17 107-123 109-125 (151)
134 3tjo_A Serine protease HTRA1; 34.9 24 0.00084 25.5 2.6 21 105-125 187-207 (231)
135 3lgi_A Protease DEGS; stress-s 34.5 21 0.00072 25.9 2.2 22 103-124 172-193 (237)
136 2as9_A Serine protease; trypsi 31.4 25 0.00087 24.8 2.2 22 104-125 155-176 (210)
137 3sti_A Protease DEGQ; serine p 30.6 32 0.0011 25.3 2.6 21 104-124 184-204 (245)
138 3k6y_A Serine protease, possib 30.2 32 0.0011 24.8 2.6 22 104-125 180-201 (237)
139 2w5e_A Putative serine proteas 29.4 37 0.0013 23.3 2.7 23 102-124 122-144 (163)
140 3fan_A Non-structural protein; 29.1 31 0.0011 24.9 2.3 27 103-129 123-149 (213)
141 2w7s_A Serine protease SPLA; h 28.6 37 0.0013 23.6 2.6 22 104-125 151-172 (200)
142 2vid_A Serine protease SPLB; h 26.2 43 0.0015 23.2 2.6 22 104-125 154-175 (204)
143 1qtf_A Exfoliative toxin B; se 25.3 45 0.0016 24.2 2.7 22 104-125 183-204 (246)
144 2wfu_B Probable insulin-like p 23.5 54 0.0018 15.1 1.8 19 7-25 8-26 (26)
145 1l1j_A Heat shock protease HTR 21.4 48 0.0016 24.1 2.1 22 104-125 180-201 (239)
146 1agj_A Epidermolytic toxin A; 21.2 56 0.0019 23.5 2.5 22 104-125 192-213 (242)
147 3k2t_A LMO2511 protein; lister 20.5 1.2E+02 0.0042 16.8 4.2 26 90-115 11-36 (57)
148 3num_A Serine protease HTRA1; 20.3 58 0.002 24.9 2.5 21 105-125 170-190 (332)
149 1te0_A Protease DEGS; two doma 20.1 64 0.0022 24.5 2.7 22 104-125 162-183 (318)
No 1
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.85 E-value=6.6e-21 Score=146.97 Aligned_cols=173 Identities=12% Similarity=0.078 Sum_probs=136.7
Q ss_pred cccccHHHHHHHHhcCcccCCceee--cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccc
Q 029781 4 ISIPSCLTLARLNANGVINSVPHLQ--LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFM 79 (188)
Q Consensus 4 ~~~~sv~~a~~~m~~~~~~~~pVvd--~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im 79 (188)
..-.++.+|+++|.+++++++||+| +|+++ +|.+|+++...... ....+.... . .........+++++|
T Consensus 18 ~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~---~~~~~~~~~-~---~~~~~~~~~~v~~im 90 (280)
T 3kh5_A 18 YPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGS---KYNLIREKH-E---RNFLAAINEPVREIM 90 (280)
T ss_dssp CTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSG---GGHHHHTTS-T---TCHHHHTTSBGGGTS
T ss_pred CCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccc---hhhhhhhcc-c---cchhHHhhhhHHHhc
Confidence 3457899999999999999999999 58899 99999985321100 000111000 0 000011256899999
Q ss_pred ccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCc-ccccccccccCcc-cCCcchHH
Q 029781 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGS-MRKLGFNLYFGFN-SGNAYFAR 157 (188)
Q Consensus 80 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 157 (188)
.+ ++.++.+++++.++++.|.+++++++||+|++|+++|++|.+|+++.+..... ..++.++|.+.+. +.+++++.
T Consensus 91 ~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~ 168 (280)
T 3kh5_A 91 EE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLK 168 (280)
T ss_dssp BC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHH
T ss_pred CC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHH
Confidence 98 89999999999999999999999999999988999999999999987654433 3367888876655 99999999
Q ss_pred HHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 158 WLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 158 ~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
++.+.|.+++.+.+||++++.+.|++|.
T Consensus 169 ~~~~~~~~~~~~~~~Vv~~~~~~Givt~ 196 (280)
T 3kh5_A 169 DVARTMVRNGFRRLPVVSEGRLVGIITS 196 (280)
T ss_dssp HHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred HHHHHHHHcCCCEEEEEECCEEEEEEEH
Confidence 9999999999999999999999999985
No 2
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.85 E-value=2.5e-21 Score=150.88 Aligned_cols=155 Identities=16% Similarity=0.163 Sum_probs=133.0
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-+++.+|+++|.+++++++||+| +|+++ +|.+|+++... ......+++++|.+
T Consensus 109 ~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~-----------------------~~~~~~~v~~~m~~- 164 (296)
T 3ddj_A 109 TSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYK-----------------------DLDEIFPVKVFMST- 164 (296)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGG-----------------------GSCCCCBHHHHSBC-
T ss_pred CCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhh-----------------------cccccccHHHhhcC-
Confidence 46789999999999999999998 88888 99999884221 12234589999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc--------CcccccccccccCcc-cCCc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS--------GSMRKLGFNLYFGFN-SGNA 153 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~--------~~~~~~~~~~~~~~~-~~~~ 153 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|++|.+|+++.+... ....++.++|.+.+. +.++
T Consensus 165 -~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~ 243 (296)
T 3ddj_A 165 -KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDEL 243 (296)
T ss_dssp -SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTT
T ss_pred -CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECCC
Confidence 899999999999999999999999999999889999999999999876521 123457788886665 9999
Q ss_pred chHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 154 YFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 154 ~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+++.++.++|.+++.+.+||++ ++.+.|+||.
T Consensus 244 ~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~ 276 (296)
T 3ddj_A 244 ASVNRAAAEMIVKRIGSLLILNKDNTIRGIITE 276 (296)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred CcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcH
Confidence 9999999999999999999998 7899999985
No 3
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.84 E-value=1.1e-20 Score=147.29 Aligned_cols=165 Identities=15% Similarity=0.082 Sum_probs=136.5
Q ss_pred ccccHHHHHHHHhcCcccCCceeecCceE--ecCCccccccccccc--chhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTV--SREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||+| |+++ +|.+|+++....... .....+ ......+++++|.
T Consensus 35 ~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~~~~~~~~~~-------------~~~~~~~v~~im~ 100 (296)
T 3ddj_A 35 KEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYCKDSCSQGDL-------------YHISTTPIIDYMT 100 (296)
T ss_dssp TTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC---CCHHHH-------------HHHHTSBGGGTSE
T ss_pred CCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhcccccccccchhh-------------HHHhcccHHHhcc
Confidence 457899999999999999999999 9999 999999853211000 000000 0122568999999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccccCcc-cCCcchHHHH
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFN-SGNAYFARWL 159 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v 159 (188)
+ ++.++.+++++.++++.|.+++++++||+|++|+++|++|.+|+++.........++.++|.+.+. +.+++++.++
T Consensus 101 ~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~ 178 (296)
T 3ddj_A 101 P--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQA 178 (296)
T ss_dssp E--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHH
T ss_pred C--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHH
Confidence 8 899999999999999999999999999999889999999999999877665556678888876655 9999999999
Q ss_pred HHHHhccCceEEEEEe-CCEeeceeec
Q 029781 160 LKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 160 ~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+.|.+++...+||++ ++.+.|++|.
T Consensus 179 ~~~m~~~~~~~~~Vvd~~~~~~Givt~ 205 (296)
T 3ddj_A 179 VKLMLRRGFRRLPVIDDDNKVVGIVTV 205 (296)
T ss_dssp HHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred HHHHHHcCCCEEEEEcCCCEEEEEEEH
Confidence 9999999999999998 7899999985
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.84 E-value=7.1e-21 Score=146.79 Aligned_cols=155 Identities=12% Similarity=0.144 Sum_probs=130.7
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-.++.+|+++|.+++++++||+| +|+++ +|.+|+++.... ......+++++|.+
T Consensus 100 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~----------------------~~~~~~~v~~~m~~- 156 (280)
T 3kh5_A 100 NADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLD----------------------KIDENEVIDDYITR- 156 (280)
T ss_dssp TCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGG----------------------GSCTTCBSGGGCBC-
T ss_pred CCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhh----------------------cCCCCCCHHHHhCC-
Confidence 46789999999999999999999 88999 999998742110 11223589999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC-------------cccccccccccCcc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG-------------SMRKLGFNLYFGFN 149 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~-------------~~~~~~~~~~~~~~ 149 (188)
++.++.+++++.++++.|.+++.+.+||+ ++|+++|+||.+|+++.....+ ...++.++|.+.+.
T Consensus 157 -~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~ 234 (280)
T 3kh5_A 157 -DVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEIMKRDVI 234 (280)
T ss_dssp -SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHHSBSSCC
T ss_pred -CCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHHhcCCCE
Confidence 89999999999999999999999999999 4799999999999998764322 23457788876655
Q ss_pred -cCCcchHHHHHHHHhccCceEEEEEeCC-Eeeceeec
Q 029781 150 -SGNAYFARWLLKFVGGINCGFLLTVEGA-MTANIISS 185 (188)
Q Consensus 150 -~~~~~~~~~v~~~l~~~~~~~~~vv~~~-~~~giit~ 185 (188)
+.+++++.++.+.|.+++.+.+||++++ .+.|+||.
T Consensus 235 ~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~ 272 (280)
T 3kh5_A 235 TAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITE 272 (280)
T ss_dssp CBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEH
T ss_pred EECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeH
Confidence 9999999999999999999999999865 99999985
No 5
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.83 E-value=4.4e-20 Score=142.68 Aligned_cols=157 Identities=15% Similarity=0.105 Sum_probs=130.0
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccc-cccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSK-RLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
-.++.+|++.|.+++++.+||+| +|+++ +|.+|+.+ .... .......+++++|.+
T Consensus 76 ~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~---------------------~~~~~~~~v~~~m~~ 134 (282)
T 2yzq_A 76 NDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAK---------------------SEKYKGVEIEPYYQR 134 (282)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT---------------------CSGGGGCBSTTTSBS
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhc---------------------cCCcccCcHHHHhCC
Confidence 46899999999999999999999 78888 99999874 2210 011235678999988
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHh------hchh------c----------------
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL------ALDS------I---------------- 133 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~------~~~~------~---------------- 133 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|++|..|++ ++.. .
T Consensus 135 --~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (282)
T 2yzq_A 135 --YVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFE 212 (282)
T ss_dssp --CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------
T ss_pred --CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHh
Confidence 899999999999999999999999999999889999999999999 4432 0
Q ss_pred ----cCcccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 134 ----SGSMRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 134 ----~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
.....++.++|.+.+. +.+++++.++.++|.+++.+.+||+++ +.+.|+||.
T Consensus 213 ~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~ 270 (282)
T 2yzq_A 213 KFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRD 270 (282)
T ss_dssp ------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEH
T ss_pred HhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeH
Confidence 0123457889987766 999999999999999999999999997 599999985
No 6
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.83 E-value=5.2e-20 Score=142.25 Aligned_cols=152 Identities=15% Similarity=0.034 Sum_probs=114.1
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-+++.+|+++|.+++++++||+| +|+++ +|.+|++.. ....+++++|.+
T Consensus 16 ~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~---------------------------~~~~~v~~~m~~ 68 (282)
T 2yzq_A 16 LPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVN---------------------------PDEEQLAMLVKR 68 (282)
T ss_dssp SSCC------------CCEEEEECTTCCEEEEEESSCC-------------------------------------CCCBS
T ss_pred CCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhh---------------------------hccCCHHHHcCC
Confidence 346899999999999999999999 89999 999998721 124678999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhh-chhcc--CcccccccccccCcc-cCCcchHH
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSIS--GSMRKLGFNLYFGFN-SGNAYFAR 157 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~-~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~ 157 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|++|..|+++ .+... ....++.++|.+.+. +.++.++.
T Consensus 69 --~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~ 146 (282)
T 2yzq_A 69 --DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQRYVSIVWEGTPLK 146 (282)
T ss_dssp --CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBSCCCCEETTSBHH
T ss_pred --CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCCCCEEECCCCCHH
Confidence 8899999999999999999999999999998899999999999998 66532 223456788876555 89999999
Q ss_pred HHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 158 WLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 158 ~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
++.+.|.+++...+||++ ++.+.|++|.
T Consensus 147 ~~~~~~~~~~~~~l~Vvd~~~~~~Giit~ 175 (282)
T 2yzq_A 147 AALKALLLSNSMALPVVDSEGNLVGIVDE 175 (282)
T ss_dssp HHHHHHHTCSSSEEEEECTTSCEEEEEEG
T ss_pred HHHHHHHHcCCcEEEEEcCCCeEEEEEEH
Confidence 999999999999999997 6789999984
No 7
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.82 E-value=1.2e-19 Score=130.75 Aligned_cols=113 Identities=15% Similarity=0.166 Sum_probs=100.0
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---------------
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG--------------- 135 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~--------------- 135 (188)
...+|+|+|++ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++......
T Consensus 16 ~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T 4esy_A 16 RQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAP 93 (170)
T ss_dssp HTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHH
T ss_pred cCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchh
Confidence 36799999999 9999999999999999999999999999999999999999999987543221
Q ss_pred ---------cccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 136 ---------SMRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 136 ---------~~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
...++.++|.+++. +.+++++.+++++|.+++++.+||++++.+.|+||.
T Consensus 94 ~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~ 153 (170)
T 4esy_A 94 EVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTR 153 (170)
T ss_dssp HHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEH
T ss_pred hHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEH
Confidence 12346778877776 999999999999999999999999999999999985
No 8
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.81 E-value=4.8e-20 Score=145.29 Aligned_cols=160 Identities=16% Similarity=0.170 Sum_probs=131.6
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCc-----eE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPI-----TV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGD 77 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~-----l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 77 (188)
-.++.+|++.|.+++++++||+| ++. ++ +|.+|+++.... .. ........++++
T Consensus 130 ~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~------------~~------~~~~~~~~~v~~ 191 (323)
T 3t4n_C 130 SRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVAL------------NC------RETHFLKIPIGD 191 (323)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHH------------HC------GGGGGCCSBGGG
T ss_pred CCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHh------------cC------CchhhhhCcHHH
Confidence 46889999999999999999999 554 77 999999842210 00 001123457889
Q ss_pred c---cccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---ccccccccccc-----
Q 029781 78 F---MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNLYF----- 146 (188)
Q Consensus 78 i---m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~~~----- 146 (188)
+ |.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++++.... ...++.++|.+
T Consensus 192 ~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~ 269 (323)
T 3t4n_C 192 LNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDF 269 (323)
T ss_dssp TTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGGSCTTC
T ss_pred cCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhhccccC
Confidence 9 887 8999999999999999999999999999998899999999999998765432 23457788876
Q ss_pred -Ccc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 147 -GFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 147 -~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+. +.+++++.++.++|.+++.+.+||++ ++.+.|+||.
T Consensus 270 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~ 311 (323)
T 3t4n_C 270 EGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTL 311 (323)
T ss_dssp CCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEH
T ss_pred CCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEH
Confidence 444 99999999999999999999999998 6899999985
No 9
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.78 E-value=8.6e-19 Score=120.31 Aligned_cols=114 Identities=18% Similarity=0.248 Sum_probs=100.5
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhccCcccccccccccCccc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFNS 150 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (188)
+.+++++|++..++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|++++........++.++|.++..+
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~~~~v 81 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVV 81 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBCCCEE
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCCCeEE
Confidence 46899999972258999999999999999999999999999987 89999999999998876555566788899886669
Q ss_pred CCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 151 GNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+++++.+++++|.+++.+.+||++ ++.+.|+||.
T Consensus 82 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 82 PESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp ETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEH
T ss_pred CCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEH
Confidence 9999999999999999999999998 5899999985
No 10
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.78 E-value=2e-18 Score=118.88 Aligned_cols=112 Identities=15% Similarity=0.202 Sum_probs=99.0
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhccCcccccccccccCccc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFNS 150 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (188)
..+++++|+++.++.++++++++.+|++.|.+++++++||+|++ |+++|+||.+|++++... ...++.++|.+...+
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~--~~~~v~~~m~~~~~v 81 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE--PALDIRSLVRPAVFI 81 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC--TTSCGGGGCBCCCEE
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc--CCcCHHHHhCCCeEe
Confidence 57899999953378899999999999999999999999999975 899999999999987652 345578888886669
Q ss_pred CCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 151 GNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
.+++++.+++++|.+++.+.+||+++ +.+.|++|.
T Consensus 82 ~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 82 PEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp ETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEH
T ss_pred CCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEH
Confidence 99999999999999999999999986 899999985
No 11
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.78 E-value=1.3e-18 Score=120.82 Aligned_cols=114 Identities=19% Similarity=0.212 Sum_probs=99.2
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhc-cCcccccccccccCcc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSI-SGSMRKLGFNLYFGFN 149 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~-~~~~~~~~~~~~~~~~ 149 (188)
+.+++++|+++.++.++.+++++.+|++.|.+++++++||+|++ |+++|+||.+|++++... .....++.++|.++..
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 81 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRPATF 81 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBCCCE
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCCCeE
Confidence 46899999954378999999999999999999999999999987 799999999999987652 2344568899988666
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+++++.+++++|.+++.+.+||++ ++.+.|+||.
T Consensus 82 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 82 VPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp EETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEH
T ss_pred ECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEH
Confidence 99999999999999999999999997 4899999985
No 12
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.77 E-value=6.8e-19 Score=121.31 Aligned_cols=115 Identities=15% Similarity=0.148 Sum_probs=99.7
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhccCcccccccccccCcc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFN 149 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (188)
...+++++|++..++.++++++++.+|++.|.+++++++||+|++ |+++|+||.+|++++........++.++|.+...
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m~~~~~ 83 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVMRPIQV 83 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHSEECCE
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHhcCCcC
Confidence 357899999964366789999999999999999999999999987 8999999999999887665556668888977666
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
+.+++++.+++++|.+++.+.+||+++ +.+.|++|.
T Consensus 84 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 84 VLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp EETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEH
T ss_pred cCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEH
Confidence 999999999999999999999999975 899999985
No 13
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.77 E-value=3.8e-18 Score=120.03 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=102.0
Q ss_pred CCCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhccCcccccccccccC
Q 029781 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGSMRKLGFNLYFG 147 (188)
Q Consensus 69 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~ 147 (188)
.....+++++|+++.++.++++++++.+|++.|.+++++++||+|++ |+++|+||.+|++++..... ..++.++|.+.
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-~~~v~~~m~~~ 97 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-KIELEEILRDI 97 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-CCCGGGTCBCC
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-CccHHHhcCCC
Confidence 34578999999976678999999999999999999999999999987 89999999999998765443 55678889555
Q ss_pred cccCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 148 FNSGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 148 ~~~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
..+.+++++.+++++|.+++.+.+||+++ +.+.|+||.
T Consensus 98 ~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 98 IYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp EEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEH
T ss_pred eEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEH
Confidence 55999999999999999999999999986 899999985
No 14
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.76 E-value=2.2e-18 Score=136.38 Aligned_cols=160 Identities=14% Similarity=0.103 Sum_probs=128.6
Q ss_pred cccHHHHHHHHhcCcccCCceee-cC-c----eE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LP-I----TV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGD 77 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~-~----l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 77 (188)
-.++.+|++.|.+++++++||+| ++ + ++ +|.+|+++.... .. . .......++++
T Consensus 125 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~----~~----~----------~~~~~~~~v~~ 186 (334)
T 2qrd_G 125 MHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISM----NC----K----------ETAMLRVPLNQ 186 (334)
T ss_dssp TSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHH----HC----G----------GGGGCCCBGGG
T ss_pred CCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHh----hc----c----------chhhhhCcHHH
Confidence 35789999999999999999999 54 4 78 999998842210 00 0 00112456778
Q ss_pred ---ccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---cccccccccc------
Q 029781 78 ---FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNLY------ 145 (188)
Q Consensus 78 ---im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~~------ 145 (188)
+|.+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|+++++.... ...++.++|.
T Consensus 187 l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~ 264 (334)
T 2qrd_G 187 MTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKRPANF 264 (334)
T ss_dssp SSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTCCTTC
T ss_pred hCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcccccC
Confidence 5887 8999999999999999999999999999998899999999999998765432 2345677787
Q ss_pred -cCcccCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 146 -FGFNSGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 146 -~~~~~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+...+.+++++.++.++|.+++.+.+||++ ++.+.|+||.
T Consensus 265 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~ 306 (334)
T 2qrd_G 265 DGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSL 306 (334)
T ss_dssp CCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEH
T ss_pred CCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeH
Confidence 344499999999999999999999999998 5899999985
No 15
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.75 E-value=4.2e-18 Score=134.62 Aligned_cols=163 Identities=19% Similarity=0.189 Sum_probs=127.0
Q ss_pred cccHHHHHHHHhcCcccCCceee--cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccc--c
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ--LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDF--M 79 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd--~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i--m 79 (188)
-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++...... . . .........++.++ |
T Consensus 134 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~-----------~-~---~~~~~~~~~~v~~~~v~ 198 (330)
T 2v8q_E 134 NASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFI-----------T-E---FPKPEFMSKSLEELQIG 198 (330)
T ss_dssp TSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHS-----------C-S---SSCCGGGGSBHHHHTCS
T ss_pred CCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHh-----------h-c---cCchhhhcCCHHHhccc
Confidence 46889999999999999999999 58888 99999884221000 0 0 00011122355565 5
Q ss_pred c-cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---ccccccccc-------ccCc
Q 029781 80 T-KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNL-------YFGF 148 (188)
Q Consensus 80 ~-~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~-------~~~~ 148 (188)
. + ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|++++..... ...++.++| .+..
T Consensus 199 ~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 276 (330)
T 2v8q_E 199 TYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFEGVL 276 (330)
T ss_dssp BCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGGCCSCCCSCC
T ss_pred CcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhccccccCCCe
Confidence 4 5 7899999999999999999999999999998899999999999998775432 134566666 3444
Q ss_pred ccCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 149 NSGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 149 ~~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
.+.+++++.++.++|.+++.+.+||+++ +.+.|+||.
T Consensus 277 ~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~ 314 (330)
T 2v8q_E 277 KCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSL 314 (330)
T ss_dssp EECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred EECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeH
Confidence 4999999999999999999999999985 899999985
No 16
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.75 E-value=2.9e-18 Score=118.31 Aligned_cols=113 Identities=8% Similarity=-0.038 Sum_probs=97.6
Q ss_pred cccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcC-CCcEEEEEehHHHhhchhccCc--ccccccccccCcc
Q 029781 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD-DWKLVGVVSDYDLLALDSISGS--MRKLGFNLYFGFN 149 (188)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~~~~~--~~~~~~~~~~~~~ 149 (188)
.+++++|+++.++.++++++++.+|++.|.+++++++||+++ +|+++|++|.+|++++...... ..++.++|.++..
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 81 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYF 81 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHSBCCCE
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhccCCeE
Confidence 578999976447899999999999999999999999999975 5899999999999987765332 2346788877767
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+++++.+++++|.+++.+.+||++ ++.+.|++|.
T Consensus 82 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 82 VPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp EETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEH
T ss_pred eCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeH
Confidence 99999999999999999999999997 5899999985
No 17
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.75 E-value=7.2e-18 Score=125.88 Aligned_cols=140 Identities=15% Similarity=0.027 Sum_probs=89.5
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-.++.+|+++|.+++++++||+| +|+++ +|.+|+.+. ....+++++|.+
T Consensus 29 ~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~---------------------------~~~~~v~~im~~- 80 (213)
T 1vr9_A 29 SATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL---------------------------DLDSSVFNKVSL- 80 (213)
T ss_dssp TCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS---------------------------CTTSBSGGGCBC-
T ss_pred CCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh---------------------------cCCCcHHHHccC-
Confidence 46899999999999999999999 88999 999998731 114579999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccccCcccCCcchHHHHHHH
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFNSGNAYFARWLLKF 162 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 162 (188)
++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++..............+... .......+.++.+.
T Consensus 81 -~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~~~~~~~~~l~~~-~~~~~~~l~~~~~~ 158 (213)
T 1vr9_A 81 -PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEALAMDVPGIRFSVL-LEDKPGELRKVVDA 158 (213)
T ss_dssp -TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSCC--------------------------
T ss_pred -CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHhcCCCCcEEEEEE-eCCCCccHHHHHHH
Confidence 8999999999999999999999999999998899999999999998765332211111111111 11333458888999
Q ss_pred HhccCceEEEEEe
Q 029781 163 VGGINCGFLLTVE 175 (188)
Q Consensus 163 l~~~~~~~~~vv~ 175 (188)
|.+++.+.++|+.
T Consensus 159 l~~~~~~~l~V~~ 171 (213)
T 1vr9_A 159 LALSNINILSVIT 171 (213)
T ss_dssp -------------
T ss_pred HHHCCCcEEEEEE
Confidence 9999999988874
No 18
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.74 E-value=9.1e-18 Score=119.28 Aligned_cols=115 Identities=17% Similarity=0.179 Sum_probs=100.6
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCC-cEEEEEehHHHhhchhccCcccccccccccCc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW-KLVGVVSDYDLLALDSISGSMRKLGFNLYFGF 148 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~-~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (188)
....+++++|+++.++.++++++++.+|++.|.+++++++||+|+++ +++|+||.+|++++.... ...++.++|.++.
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-~~~~v~~im~~~~ 113 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-EQFHLKSILRPAV 113 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-GGCCHHHHCBCCC
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-CcccHHHHcCCCE
Confidence 34678999998754688999999999999999999999999999774 999999999999876543 4456788898866
Q ss_pred ccCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 NSGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+.+++++.+++++|.+++.+.+||++ ++.+.|+||.
T Consensus 114 ~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 114 FVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp EEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEH
T ss_pred EECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEH
Confidence 699999999999999999999999997 5899999985
No 19
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=1.3e-17 Score=113.32 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=97.4
Q ss_pred cccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccccCcc-cC
Q 029781 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFN-SG 151 (188)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~-~~ 151 (188)
++++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|++|.+|++++..... .++.++|.+.+. +.
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~--~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK--KTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTC--CBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc--cCHHHHhcCCCeEEC
Confidence 368899998 8999999999999999999999999999998899999999999998765432 367888876665 99
Q ss_pred CcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 152 NAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 152 ~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
+++++.+++++|.+++...+||+++ +.+.|++|.
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEH
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeH
Confidence 9999999999999999999999987 899999985
No 20
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.74 E-value=2.4e-17 Score=116.11 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=100.4
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC--cccccccccccCcc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG--SMRKLGFNLYFGFN 149 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~--~~~~~~~~~~~~~~ 149 (188)
..+++++|.+..++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++++.... ...++.++|.+.+.
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 106 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGI 106 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCe
Confidence 3589999987546889999999999999999999999999998899999999999998765433 34567888876665
Q ss_pred -cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 150 -SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 150 -~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
+.+++++.+++++|.+++...+||++++.+.|+||.
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~ 143 (149)
T 3k2v_A 107 RIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHM 143 (149)
T ss_dssp EECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEH
Confidence 999999999999999999999999999999999985
No 21
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.74 E-value=1.7e-17 Score=119.73 Aligned_cols=116 Identities=16% Similarity=0.181 Sum_probs=98.1
Q ss_pred CCCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhccCcccccccccccC
Q 029781 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGSMRKLGFNLYFG 147 (188)
Q Consensus 69 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~ 147 (188)
.....+++++|+++.++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|++++..... ..++.++|.++
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-~~~v~~im~~~ 116 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE-RLELVDLVKNC 116 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-CCCGGGGCBCC
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-cccHHHHhcCC
Confidence 34568999999943378999999999999999999999999999987 89999999999998765432 45678899555
Q ss_pred cccCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 148 FNSGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 148 ~~~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
..+.+++++.+++++|.+++.+.+||+++ +.+.|+||.
T Consensus 117 ~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~ 155 (172)
T 3lhh_A 117 NFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTL 155 (172)
T ss_dssp EEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred eEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeH
Confidence 55999999999999999999999999986 899999985
No 22
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.73 E-value=1.8e-17 Score=113.72 Aligned_cols=112 Identities=18% Similarity=0.133 Sum_probs=99.4
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcc-cccccccccCcc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSM-RKLGFNLYFGFN 149 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~-~~~~~~~~~~~~ 149 (188)
...+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+|+ |+++|++|.+|+++........ .++.++|.+.+.
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVR 79 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCCC
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCCc
Confidence 35789999999 8999999999999999999999999999998 9999999999999877554433 557888876665
Q ss_pred -cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 150 -SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 150 -~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+++++.++++.|.+++...+||++ ++.+.|++|.
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEH
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEH
Confidence 99999999999999999999999996 6899999985
No 23
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.72 E-value=2.5e-17 Score=117.23 Aligned_cols=111 Identities=18% Similarity=0.181 Sum_probs=94.9
Q ss_pred cccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC------ccccccccccc
Q 029781 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG------SMRKLGFNLYF 146 (188)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~------~~~~~~~~~~~ 146 (188)
.+++++|+|+.++.++.+++++.+|++.|.+++++++||+|++|+++|+||.+|++++..... ...++.++|.+
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 478899998878999999999999999999999999999998899999999999997664332 23457888887
Q ss_pred Ccc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 147 GFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 147 ~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+. +.+++++.+++++|.+++. +||++ +|.+.|+||.
T Consensus 95 ~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITR 133 (156)
T ss_dssp SCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEH
T ss_pred CceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEH
Confidence 766 9999999999999987664 78886 5899999985
No 24
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.72 E-value=2.5e-18 Score=123.81 Aligned_cols=125 Identities=18% Similarity=0.149 Sum_probs=92.9
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCC-CCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGI-TNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~im~ 80 (188)
.-+++.+|+++|.+++++++||+| +|+++ +|.+|+++.............+....... ...........+++++|+
T Consensus 33 ~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 112 (170)
T 4esy_A 33 EDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVEHLFETGRKLTASAVMT 112 (170)
T ss_dssp TTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCB
T ss_pred CcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHHhhhccccccchhhhcc
Confidence 457899999999999999999999 89999 99999986432211111111100000000 000001123568999999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ +++++.+++++.+|++.|.+++++++||+| +|+++|+||..|+++++.
T Consensus 113 ~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 113 Q--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp C--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSC
T ss_pred c--CcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 9 999999999999999999999999999998 599999999999998764
No 25
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.72 E-value=4e-17 Score=116.38 Aligned_cols=112 Identities=23% Similarity=0.227 Sum_probs=98.5
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc----------cCcccccc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI----------SGSMRKLG 141 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~----------~~~~~~~~ 141 (188)
..+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||.+|++++... .....++.
T Consensus 4 ~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 4 MIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred cCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 4689999998 89999999999999999999999999999988999999999999976532 12344578
Q ss_pred cccccCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 142 FNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 142 ~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
++|.+.+. +.+++++.+++++|.+++...+||++++.+.|+||.
T Consensus 82 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~ 126 (160)
T 2o16_A 82 EVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITD 126 (160)
T ss_dssp HHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEH
Confidence 88877666 999999999999999999999999999999999985
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.72 E-value=4.2e-17 Score=111.08 Aligned_cols=109 Identities=18% Similarity=0.135 Sum_probs=96.9
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC--cccccccccccCcc-c
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG--SMRKLGFNLYFGFN-S 150 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~--~~~~~~~~~~~~~~-~ 150 (188)
+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+| +|+++|++|.+|+++...... ...++.++|.+.+. +
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeEE
Confidence 67899998 899999999999999999999999999999 899999999999997664432 24567888876665 9
Q ss_pred CCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 151 GNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
.+++++.++.+.|.+++...+||++++.+.|++|.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~ 113 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISA 113 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEH
Confidence 99999999999999999999999999999999985
No 27
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.72 E-value=2.2e-17 Score=130.02 Aligned_cols=171 Identities=11% Similarity=0.093 Sum_probs=122.4
Q ss_pred ccHHHHHHHHhcCcccCCceee-c-CceE--ecCCccccccccc-ccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 7 PSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFF-TVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 7 ~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.++.+|++.|.+++++++||+| + ++++ +|.+|+......+ ..+.....+... .........++.++|.+
T Consensus 49 ~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~------~~~~v~~i~~~~~~~~~ 122 (323)
T 3t4n_C 49 LLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVDKL------QLDGLKDIERALGVDQL 122 (323)
T ss_dssp SBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGC------BHHHHHHHHHHTTC---
T ss_pred CcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHH------HHHHHHHHHHHhCCCCC
Confidence 5899999999999999999999 4 4888 9999988522110 000000000000 00000001223445567
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCc-----EEEEEehHHHhhchhcc-----Ccccccccc---cccCc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK-----LVGVVSDYDLLALDSIS-----GSMRKLGFN---LYFGF 148 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~-----~~Giit~~dl~~~~~~~-----~~~~~~~~~---~~~~~ 148 (188)
+++++.+++++.+|++.|.+++.+++||+|+++. ++|++|.+|+++.+... ....++.++ |.+.+
T Consensus 123 --~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~ 200 (323)
T 3t4n_C 123 --DTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNM 200 (323)
T ss_dssp ---CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTC
T ss_pred --CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCc
Confidence 8899999999999999999999999999998775 99999999999765421 123456777 75555
Q ss_pred c-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
. +.+++++.++.+.|.+++...+||++ ++.+.|++|.
T Consensus 201 ~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~ 239 (323)
T 3t4n_C 201 KSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEA 239 (323)
T ss_dssp CCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEET
T ss_pred EEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeH
Confidence 5 99999999999999999999999997 4799999986
No 28
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.72 E-value=4.5e-17 Score=117.82 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=97.8
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC-CcEEEEEehHHHhhchhccCcccccccccccCc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGSMRKLGFNLYFGF 148 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (188)
....+++++|+++.++.++++++++.+|++.|.+++++++||+|++ |+++|+||.+|++++..... ..++. ++.++.
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~-~~~v~-~~~~~~ 110 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG-RVRRN-RLRDPI 110 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-SCCGG-GSBCCC
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC-cchhH-hcCCCe
Confidence 4567999999864478899999999999999999999999999876 89999999999998764332 33456 666666
Q ss_pred ccCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 NSGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+.+++++.+++++|.+++.+.+||++ ++.+.|+||.
T Consensus 111 ~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~ 148 (173)
T 3ocm_A 111 IVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTP 148 (173)
T ss_dssp EECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECH
T ss_pred EECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeH
Confidence 699999999999999999999999997 5899999985
No 29
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=1e-16 Score=114.77 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=102.7
Q ss_pred CCCCCcccccccccC-CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc---Ccccccccc
Q 029781 68 PRNGTYTVGDFMTKK-EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS---GSMRKLGFN 143 (188)
Q Consensus 68 ~~~~~~~v~~im~~~-~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~---~~~~~~~~~ 143 (188)
.....++++++|.+. .++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++++... ....++.++
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 98 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVA 98 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGT
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHH
Confidence 445678999999952 2689999999999999999999999999999889999999999999876543 234567888
Q ss_pred cccCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 144 LYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 144 ~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
|.+.+. +.+++++.+++++|.+++...+||++++.+.|+||.
T Consensus 99 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~ 141 (165)
T 3fhm_A 99 MTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISI 141 (165)
T ss_dssp SBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEH
Confidence 876665 999999999999999999999999999999999985
No 30
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.71 E-value=1.3e-16 Score=111.18 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=97.2
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCC--cEEEEEehHHHhhchhcc-CcccccccccccCc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW--KLVGVVSDYDLLALDSIS-GSMRKLGFNLYFGF 148 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~--~~~Giit~~dl~~~~~~~-~~~~~~~~~~~~~~ 148 (188)
..+++++|.+ ++.++.+++++.++++.|.+++.+.+||+|++| +++|+||.+|++++.... ....++.++|.+.+
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~ 81 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPI 81 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCCC
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCCC
Confidence 3689999998 899999999999999999999999999999877 999999999999876433 23456788887665
Q ss_pred c-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
. +.++ ++.+++++|.+++.+.+||++ ++.+.|++|.
T Consensus 82 ~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~ 119 (141)
T 2rih_A 82 TVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSI 119 (141)
T ss_dssp EEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred eEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEH
Confidence 5 8999 999999999999999999998 6899999985
No 31
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.71 E-value=1.4e-17 Score=131.51 Aligned_cols=172 Identities=12% Similarity=-0.035 Sum_probs=123.7
Q ss_pred cccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
-.++.+|+++|.+++++++||+| + ++++ +|.+|++....... ... .... ..............++++|.+
T Consensus 53 ~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~----~~~-~~~~-~~l~~~~~~~~~~~~~~im~~ 126 (330)
T 2v8q_E 53 SLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYY----KSA-LVQI-YELEEHKIETWREVYLQDSFK 126 (330)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHH----HHH-TTTC-CCGGGCBHHHHHHHHSSSSCC
T ss_pred CCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHH----hcc-ccch-hHHhhccHHHHHHHHhhcccC
Confidence 46899999999999999999999 5 6788 99999884211000 000 0000 000000000001134577888
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcC-CCcEEEEEehHHHhhchhccCcc--------cccccc--c--ccCc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDD-DWKLVGVVSDYDLLALDSISGSM--------RKLGFN--L--YFGF 148 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-~~~~~Giit~~dl~~~~~~~~~~--------~~~~~~--~--~~~~ 148 (188)
++.++.+++++.++++.|.+++.+++||+|+ +|+++|++|.+|++++....... ..+.++ + .+..
T Consensus 127 --~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~ 204 (330)
T 2v8q_E 127 --PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIA 204 (330)
T ss_dssp --CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCC
T ss_pred --CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCce
Confidence 8999999999999999999999999999998 79999999999999876432211 122222 2 3344
Q ss_pred ccCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 NSGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+.+++++.++.+.|.+++...+||++ ++.+.|++|.
T Consensus 205 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~ 242 (330)
T 2v8q_E 205 MVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSK 242 (330)
T ss_dssp CEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEG
T ss_pred EECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEH
Confidence 488999999999999999999999998 6899999985
No 32
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.70 E-value=4.4e-17 Score=112.30 Aligned_cols=112 Identities=16% Similarity=0.147 Sum_probs=97.8
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHh-hchhccC--cccccccccccCc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISG--SMRKLGFNLYFGF 148 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~-~~~~~~~--~~~~~~~~~~~~~ 148 (188)
..+++++|.+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|++|.+|++ +++.... ...++.++|.+.+
T Consensus 7 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~ 84 (133)
T 1y5h_A 7 MTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSI 84 (133)
T ss_dssp -CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCC
T ss_pred hcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCC
Confidence 4589999998 899999999999999999999999999998889999999999998 4554332 2356788887665
Q ss_pred c-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
. +.+++++.++.++|.+++.+.+||++++.+.|++|.
T Consensus 85 ~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~ 122 (133)
T 1y5h_A 85 YYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTE 122 (133)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEH
Confidence 5 999999999999999999999999999999999985
No 33
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.70 E-value=2.9e-16 Score=108.85 Aligned_cols=112 Identities=19% Similarity=0.158 Sum_probs=97.3
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHh-hchhcc-CcccccccccccCc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSIS-GSMRKLGFNLYFGF 148 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~-~~~~~~-~~~~~~~~~~~~~~ 148 (188)
...+++++|.+ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|++ ++.... ....++.++|.+.+
T Consensus 5 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 82 (138)
T 2yzi_A 5 MKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRNL 82 (138)
T ss_dssp TTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBCSC
T ss_pred hhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhCCC
Confidence 35789999998 899999999999999999999999999999889999999999997 444332 23456788897666
Q ss_pred c-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
. +.+++++.++.++|.+++.+.+ |++ ++.+.|++|.
T Consensus 83 ~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~ 120 (138)
T 2yzi_A 83 ITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTL 120 (138)
T ss_dssp CEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEH
T ss_pred eEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEH
Confidence 5 9999999999999999999988 887 8999999985
No 34
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.70 E-value=2.8e-17 Score=116.25 Aligned_cols=114 Identities=18% Similarity=0.265 Sum_probs=98.7
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEE-cC-CCcEEEEEehHHHhhchhccCcccccccccccCc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVI-DD-DWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGF 148 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVv-d~-~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (188)
...+++++|+++.++.++++++++.+|++.|.+++++++||+ |+ +|+++|+||.+|++++..... ..++.++|.+..
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~-~~~v~~~m~~~~ 96 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD-KAKISTIMRDIV 96 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT-TSBGGGTCBCCE
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC-CCcHHHHhCCCe
Confidence 457899999864478899999999999999999999999999 65 489999999999998765433 456788895555
Q ss_pred ccCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 149 NSGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 149 ~~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
.+.+++++.+++++|.+++.+.+||+++ +.+.|+||.
T Consensus 97 ~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 97 SVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp EEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECH
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeH
Confidence 5999999999999999999999999985 899999985
No 35
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.70 E-value=1.6e-16 Score=109.50 Aligned_cols=111 Identities=18% Similarity=0.165 Sum_probs=97.9
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC-cccccccccccCcc-
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG-SMRKLGFNLYFGFN- 149 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~-~~~~~~~~~~~~~~- 149 (188)
..+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+| +|+++|++|.+|++++..... ...++.++|.+.+.
T Consensus 3 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~~ 79 (133)
T 2ef7_A 3 EEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTASLIT 79 (133)
T ss_dssp CCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCCC
T ss_pred cccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCEE
Confidence 4689999998 899999999999999999999999999999 899999999999997765432 24567888876555
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+++++.++.+.|.+++...+||++ ++.+.|++|.
T Consensus 80 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 80 IREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred ECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEH
Confidence 99999999999999999999999998 6899999985
No 36
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=2.3e-16 Score=112.23 Aligned_cols=113 Identities=16% Similarity=0.122 Sum_probs=97.6
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc--Cccccccccccc-
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS--GSMRKLGFNLYF- 146 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~--~~~~~~~~~~~~- 146 (188)
....+++++|.+ + +++.+++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++..... ....++.++|.+
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~ 90 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRM 90 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEET
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCC
Confidence 346799999986 5 4999999999999999999999999999889999999999999865322 234568899985
Q ss_pred -Ccc-cCCcchHHHHHHHHhccCceEEEEEeCC----Eeeceeec
Q 029781 147 -GFN-SGNAYFARWLLKFVGGINCGFLLTVEGA----MTANIISS 185 (188)
Q Consensus 147 -~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~----~~~giit~ 185 (188)
.+. +.+++++.+++++|.+++...+||++++ .+.|+||.
T Consensus 91 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~ 135 (159)
T 3fv6_A 91 PNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTK 135 (159)
T ss_dssp TSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEH
T ss_pred CCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEH
Confidence 555 9999999999999999999999999865 89999985
No 37
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.70 E-value=2.1e-16 Score=109.25 Aligned_cols=110 Identities=14% Similarity=0.158 Sum_probs=96.6
Q ss_pred cccccccc---cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhh-chhcc--Cccccccccccc
Q 029781 73 YTVGDFMT---KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSIS--GSMRKLGFNLYF 146 (188)
Q Consensus 73 ~~v~~im~---~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~-~~~~~--~~~~~~~~~~~~ 146 (188)
.+++++|. + ++.++.+++++.+|++.|.+++.+.+||+| +|+++|++|.+|+++ ..... ....++.++|.+
T Consensus 6 ~~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 82 (135)
T 2rc3_A 6 KTVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTR 82 (135)
T ss_dssp CBHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBC
T ss_pred eeHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccC
Confidence 38999999 6 899999999999999999999999999999 799999999999986 33322 234567888976
Q ss_pred Ccc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 147 GFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 147 ~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
.+. +.+++++.+++++|.+++...+||++++.+.|++|.
T Consensus 83 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~ 122 (135)
T 2rc3_A 83 QVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSI 122 (135)
T ss_dssp SCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred CCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEH
Confidence 666 999999999999999999999999999999999985
No 38
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.70 E-value=8.8e-17 Score=111.57 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=87.9
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||++ + |+++ +|.+|+++... .......+++++|.
T Consensus 20 ~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~----------------------~~~~~~~~v~~~m~ 77 (136)
T 3lfr_A 20 ATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLIL----------------------KADGDSDDVKKLLR 77 (136)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGG----------------------SSSGGGCCGGGTCB
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH----------------------hccCCCcCHHHHcC
Confidence 346899999999999999999999 5 7999 99999984321 01234568999996
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 78 ---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 78 ---PATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp ---CCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred ---CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 4789999999999999999999999999998899999999999998764
No 39
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.70 E-value=1.2e-16 Score=112.29 Aligned_cols=114 Identities=52% Similarity=0.637 Sum_probs=97.0
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc---------------cCc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI---------------SGS 136 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~---------------~~~ 136 (188)
..+++++|.+..++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++.... ...
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 83 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTN 83 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC-----
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhc
Confidence 56899999875468899999999999999999999999999988999999999999865321 122
Q ss_pred ccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 137 MRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 137 ~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
..++.++|.+.+. +.+++++.+++++|.+++.+.+||++ ++.+.|+||.
T Consensus 84 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 84 GKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEH
T ss_pred cccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEH
Confidence 3457888887655 99999999999999999999999998 6899999985
No 40
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.70 E-value=8.6e-17 Score=110.24 Aligned_cols=101 Identities=16% Similarity=0.130 Sum_probs=87.4
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||+| + |+++ +|.+|+++... ......+++++|.
T Consensus 20 ~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~-----------------------~~~~~~~v~~~m~ 76 (127)
T 3nqr_A 20 RNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMR-----------------------SDAEAFSMDKVLR 76 (127)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGS-----------------------TTCCCCCHHHHCB
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh-----------------------ccCCCCCHHHHcC
Confidence 347899999999999999999999 5 7999 99999984220 1224568999995
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhch
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~ 131 (188)
+ +.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+
T Consensus 77 ~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 77 T---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp C---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred C---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 4 67999999999999999999999999999889999999999999765
No 41
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.69 E-value=1.6e-16 Score=112.49 Aligned_cols=112 Identities=19% Similarity=0.189 Sum_probs=95.3
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCc------ccccccccc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGS------MRKLGFNLY 145 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~------~~~~~~~~~ 145 (188)
..+++++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++....... ..++.++|.
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m~ 93 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTK 93 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGCB
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhcc
Confidence 45789999954488999999999999999999999999999988999999999999987654221 456788887
Q ss_pred cCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 146 FGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 146 ~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+. +.+++++.+++++|.+++ .+||++ ++.+.|+||.
T Consensus 94 ~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~ 133 (156)
T 3ctu_A 94 TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITR 133 (156)
T ss_dssp CSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEET
T ss_pred CCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEH
Confidence 6655 999999999999999876 588988 6899999985
No 42
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.69 E-value=7.3e-18 Score=119.99 Aligned_cols=107 Identities=16% Similarity=0.149 Sum_probs=87.1
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-+|+.+|+++|.+++++++||+| +|+++ +|.+|+++.... . . .........++.++|.+
T Consensus 32 ~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~-----------~-~-----~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 32 DTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME-----------H-D-----LSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHH-----------H-T-----CCHHHHTTSBGGGTCBC
T ss_pred CcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhh-----------c-c-----cccccccccCHHHhhcC
Confidence 356899999999999999999999 79999 999998742110 0 0 00012245789999999
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++++++++.++++.|.+++ .+||+|++|+++|+||..|+++++.
T Consensus 95 --~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 95 --DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp --SCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred --CceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHH
Confidence 9999999999999999998776 4999999999999999999998764
No 43
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.69 E-value=2.6e-16 Score=108.99 Aligned_cols=113 Identities=25% Similarity=0.252 Sum_probs=97.7
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHH-hhchhcc-CcccccccccccCc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDSIS-GSMRKLGFNLYFGF 148 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl-~~~~~~~-~~~~~~~~~~~~~~ 148 (188)
...+++++|.+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|++|.+|+ ++++... ....++.++|.+.+
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 83 (138)
T 2p9m_A 6 KNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDV 83 (138)
T ss_dssp TTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCSSC
T ss_pred ccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCCCc
Confidence 35789999998 89999999999999999999999999999988999999999999 8765432 23456788887665
Q ss_pred c-cCCcchHHHHHHHHhccC-----ceEEEEEe-CCEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGIN-----CGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~-----~~~~~vv~-~~~~~giit~ 185 (188)
. +.+++++.++.+.|.+++ ...+||++ ++.+.|++|.
T Consensus 84 ~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~ 127 (138)
T 2p9m_A 84 ITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISD 127 (138)
T ss_dssp CCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEH
T ss_pred EEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEH
Confidence 5 899999999999999999 99999998 7899999985
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.69 E-value=3.3e-16 Score=114.06 Aligned_cols=112 Identities=16% Similarity=0.159 Sum_probs=99.0
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc---cCcccccccccccCc
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI---SGSMRKLGFNLYFGF 148 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~---~~~~~~~~~~~~~~~ 148 (188)
..+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|+++.... .....++.++|.+.+
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 4789999998 89999999999999999999999999999988999999999999976542 223446788898665
Q ss_pred c-cCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
. +.+++++.+++++|.+++...+||+++ +.+.|+||.
T Consensus 86 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~ 124 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTL 124 (184)
T ss_dssp CEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEH
T ss_pred cEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEH
Confidence 5 999999999999999999999999987 899999985
No 45
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.69 E-value=1.4e-16 Score=112.05 Aligned_cols=113 Identities=19% Similarity=0.110 Sum_probs=96.5
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc-------Ccccccccc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS-------GSMRKLGFN 143 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~-------~~~~~~~~~ 143 (188)
...+++++|.+..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++++... ....++.++
T Consensus 13 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~ 92 (150)
T 3lqn_A 13 QQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQV 92 (150)
T ss_dssp HHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGT
T ss_pred hcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHH
Confidence 4679999999522689999999999999999999999999999889999999999999766421 134457888
Q ss_pred cccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 144 LYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 144 ~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
|.+.+. +.+++++.+++++|.+++. +||++ ++.+.|+||.
T Consensus 93 m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 93 MKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTR 134 (150)
T ss_dssp CBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEH
T ss_pred hcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEH
Confidence 886665 9999999999999998886 78888 7899999985
No 46
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.68 E-value=2.1e-16 Score=108.67 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=85.9
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||+| + |+++ +|.+|+++.. .....+++++|.
T Consensus 22 ~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~-------------------------~~~~~~v~~~m~ 76 (129)
T 3jtf_A 22 ISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYM-------------------------LEPALDIRSLVR 76 (129)
T ss_dssp TTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGG-------------------------TCTTSCGGGGCB
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHh-------------------------ccCCcCHHHHhC
Confidence 346899999999999999999999 4 8999 9999998421 113567899995
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 77 ---~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 77 ---PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp ---CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred ---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 4789999999999999999999999999998899999999999998653
No 47
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.68 E-value=4.2e-17 Score=111.87 Aligned_cols=104 Identities=17% Similarity=0.121 Sum_probs=89.9
Q ss_pred ccccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
.-+++.+|+++|.+++++.+||+|+|+++ +|.+|+.+... .......+++++|.+
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~----------------------~~~~~~~~v~~~m~~- 76 (128)
T 3gby_A 20 LGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRK----------------------GWPTVKEKLGEELLE- 76 (128)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCS----------------------SSCCTTCBCCGGGCB-
T ss_pred CCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHh----------------------hCCcccCcHHHHccC-
Confidence 34689999999999999999999998888 99999884211 111223679999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 77 -~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 77 -TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp -CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred -CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 8999999999999999999999999999998899999999999998764
No 48
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=111.53 Aligned_cols=114 Identities=16% Similarity=0.178 Sum_probs=97.3
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcC--CCcEEEEEehHHHhhchhccCc------ccccc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD--DWKLVGVVSDYDLLALDSISGS------MRKLG 141 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~--~~~~~Giit~~dl~~~~~~~~~------~~~~~ 141 (188)
....+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+|+ +|+++|+||..|+++....... ...+.
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~ 87 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQ 87 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHH
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhh
Confidence 346789999998 8999999999999999999999999999996 6899999999999976643221 23466
Q ss_pred cccccC-------cccCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 142 FNLYFG-------FNSGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 142 ~~~~~~-------~~~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
++|.+. ..+.+++++.+++++|.+++...+||++++.+.|+||.
T Consensus 88 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Giit~ 138 (164)
T 2pfi_A 88 DILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSW 138 (164)
T ss_dssp HHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEH
T ss_pred hhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEH
Confidence 677654 34889999999999999999999999999999999985
No 49
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.67 E-value=7.7e-17 Score=110.92 Aligned_cols=101 Identities=13% Similarity=0.153 Sum_probs=87.3
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||+| + |+++ +|.+|+++... ......+++++|.
T Consensus 23 ~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~-----------------------~~~~~~~v~~~m~ 79 (130)
T 3i8n_A 23 ATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQ-----------------------SGSGQKQLGAVMR 79 (130)
T ss_dssp TTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHH-----------------------TTTTTSBHHHHSE
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHh-----------------------cCCCcCCHHHHhc
Confidence 347899999999999999999999 5 8999 99999884210 1123568999994
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhch
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~ 131 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++
T Consensus 80 ---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 80 ---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHL 127 (130)
T ss_dssp ---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred ---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHH
Confidence 578999999999999999999999999999889999999999999765
No 50
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.67 E-value=8.5e-16 Score=114.00 Aligned_cols=110 Identities=12% Similarity=0.048 Sum_probs=97.4
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhc---CCCeEEEEcCCCcEEEEEehHHHhhchhccCccccccccccc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK---RITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYF 146 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~---~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~ 146 (188)
....+++++|++ ++.++++++++.+|++.|.++ +.+.+||+|++|+++|+||.+|++... ...++.++|.+
T Consensus 51 ~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----~~~~v~~im~~ 124 (205)
T 3kxr_A 51 YSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE----PHEPLISLLSE 124 (205)
T ss_dssp SCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC----TTSBGGGGCCS
T ss_pred CCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC----CcchHHHHhcC
Confidence 346689999999 999999999999999999987 789999999999999999999998653 34567889976
Q ss_pred Ccc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 147 GFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 147 ~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+. +.+++++.+++++|.+++...+||++ +|.+.|+||.
T Consensus 125 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 125 DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEH
T ss_pred CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEH
Confidence 555 99999999999999999999999998 5899999985
No 51
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=3.6e-16 Score=110.94 Aligned_cols=113 Identities=18% Similarity=0.126 Sum_probs=98.7
Q ss_pred CCCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCe-EEEEcCCCcEEEEEehHHHhhchh---------------
Q 029781 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITG-FPVIDDDWKLVGVVSDYDLLALDS--------------- 132 (188)
Q Consensus 69 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~-~pVvd~~~~~~Giit~~dl~~~~~--------------- 132 (188)
.....+++++|.+ ++.++.+++++.+|++.|.+++.+. +||+|++ +++|+||..|++++..
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~ 88 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRS 88 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------
T ss_pred hhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHH
Confidence 3456799999998 8999999999999999999999999 9999977 9999999999997643
Q ss_pred --ccCcccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 133 --ISGSMRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 133 --~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
......++.++|.+ +. +.+++++.+++++|.+++...+||++ ++.+.|+||.
T Consensus 89 ~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~ 144 (157)
T 1o50_A 89 SMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNS 144 (157)
T ss_dssp CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred HHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEH
Confidence 11234457888888 55 99999999999999999999999998 7899999985
No 52
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.67 E-value=3e-16 Score=113.91 Aligned_cols=114 Identities=20% Similarity=0.186 Sum_probs=98.3
Q ss_pred CCCcccccccccCCC----eeEE--cCCCCHHHHHHHHHhcCCCeEEEE--cCCCcEEEEEehHHHhhchhcc-------
Q 029781 70 NGTYTVGDFMTKKED----LHAV--KTTTTVDEALERLVEKRITGFPVI--DDDWKLVGVVSDYDLLALDSIS------- 134 (188)
Q Consensus 70 ~~~~~v~~im~~~~~----~~~v--~~~~~l~~~~~~m~~~~~~~~pVv--d~~~~~~Giit~~dl~~~~~~~------- 134 (188)
....+++++|.+ . +.++ .+++++.+|++.|.+++.+.+||+ |++|+++|+||..|++++....
T Consensus 8 ~~~~~v~dim~~--~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 8 AHKTLAMDVMKP--RRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp -CCCBHHHHSBS--CTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hccCcHHHHhcc--cccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 346799999998 5 7788 999999999999999999999999 7789999999999999765421
Q ss_pred -------------------CcccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 135 -------------------GSMRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 135 -------------------~~~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
....++.++|.+.+. +.+++++.++.++|.+++.+.+||++++.+.|+||.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~ 156 (185)
T 2j9l_A 86 VSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITK 156 (185)
T ss_dssp CTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred cccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEEEEH
Confidence 223457888876555 999999999999999999999999999999999985
No 53
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=2.3e-16 Score=113.95 Aligned_cols=114 Identities=44% Similarity=0.603 Sum_probs=96.9
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc------------------
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI------------------ 133 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~------------------ 133 (188)
.++++++|.+..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|++++...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 46889999874458899999999999999999999999999988999999999999864311
Q ss_pred -----------cCcccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 134 -----------SGSMRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 134 -----------~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.....++.++|.+.+. +.+++++.+++++|.+++...+||++ ++.+.|+||.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~ 147 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTR 147 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEH
Confidence 1223457888887655 99999999999999999999999998 6899999985
No 54
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.66 E-value=3.5e-16 Score=123.66 Aligned_cols=166 Identities=16% Similarity=0.117 Sum_probs=122.8
Q ss_pred cccHHHHHHHHhcCcccCCceee-c-CceE--ecCCccccccccccc-chhhhhhhccCCCCCCCCCCCCCCcc---c--
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTV-SREVKAFAHNGVGITNSVPPRNGTYT---V-- 75 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---v-- 75 (188)
-.++.+|++.|.+++++++||+| + ++++ +|.+|++........ ......+ ......+ +
T Consensus 40 ~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~ 107 (334)
T 2qrd_G 40 TLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAI------------AEIDKFRLLGLRE 107 (334)
T ss_dssp TSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGG------------GGGGSCBHHHHHH
T ss_pred CCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHH------------HHHhhhchhhHHH
Confidence 46899999999999999999999 4 7898 999998842210000 0000000 0000122 2
Q ss_pred --ccccccCCCe--eEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCc-----EEEEEehHHHhhchhccC-----cccccc
Q 029781 76 --GDFMTKKEDL--HAVKTTTTVDEALERLVEKRITGFPVIDDDWK-----LVGVVSDYDLLALDSISG-----SMRKLG 141 (188)
Q Consensus 76 --~~im~~~~~~--~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~-----~~Giit~~dl~~~~~~~~-----~~~~~~ 141 (188)
+++|.+ ++ .++.+++++.++++.|.+++.+++||+|++|. ++|++|.+|+++...... ...++.
T Consensus 108 ~l~~im~~--~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~ 185 (334)
T 2qrd_G 108 VERKIGAI--PPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLN 185 (334)
T ss_dssp HHHHHTCS--CSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGG
T ss_pred HHHhhccC--CCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHH
Confidence 334666 55 89999999999999999999999999987654 999999999997664321 123456
Q ss_pred c---ccccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 142 F---NLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 142 ~---~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+ +|.+.+. +.+++++.++.+.|.+++...+||++ ++.+.|++|.
T Consensus 186 ~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~ 234 (334)
T 2qrd_G 186 QMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYES 234 (334)
T ss_dssp GSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEET
T ss_pred HhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEH
Confidence 6 4665555 99999999999999999999999998 5799999985
No 55
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.66 E-value=1e-16 Score=110.49 Aligned_cols=104 Identities=11% Similarity=0.011 Sum_probs=87.3
Q ss_pred ccccHHHHHHHHhcCcccCCceee--cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ--LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd--~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||++ +|+++ +|.+|+++.... .......+++++|
T Consensus 19 ~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~---------------------~~~~~~~~v~~~m- 76 (130)
T 3hf7_A 19 INDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTE---------------------KKEFTKEIMLRAA- 76 (130)
T ss_dssp TTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTS---------------------SSCCCHHHHHHHS-
T ss_pred CCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhc---------------------cCccchhhHHHhc-
Confidence 346899999999999999999996 47899 999998842110 0112345789999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 77 ~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 77 D--EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp B--CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred c--CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 4 6889999999999999999999999999998899999999999998763
No 56
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.66 E-value=2e-16 Score=114.09 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=88.0
Q ss_pred cccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
-.++.+|+++|.+++++++||+| + ++++ +|.+|+++... .....+++++| +
T Consensus 60 ~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~------------------------~~~~~~v~~im-~ 114 (172)
T 3lhh_A 60 NLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESI------------------------AGERLELVDLV-K 114 (172)
T ss_dssp TSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHH------------------------TTCCCCGGGGC-B
T ss_pred CCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHh------------------------hcCcccHHHHh-c
Confidence 46899999999999999999999 5 8999 99999884210 11256899999 6
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 115 --~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 115 --NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALT 163 (172)
T ss_dssp --CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred --CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 8999999999999999999999999999998899999999999998764
No 57
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.66 E-value=1.5e-16 Score=107.98 Aligned_cols=101 Identities=26% Similarity=0.360 Sum_probs=88.6
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+.+... ....++.++|.+
T Consensus 16 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~-------------------------~~~~~v~~~~~~ 70 (122)
T 3kpb_A 16 SNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALA-------------------------QNKKTIEEIMTR 70 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHH-------------------------TTCCBGGGTSBS
T ss_pred CCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHH-------------------------hcccCHHHHhcC
Confidence 346899999999999999999999 89999 99999884210 112389999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 71 --~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 71 --NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp --SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred --CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 8999999999999999999999999999998899999999999998764
No 58
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.65 E-value=1.4e-16 Score=111.90 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=87.7
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||+| + |+++ +|.+|+++... .....+++++|
T Consensus 40 ~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~------------------------~~~~~~v~~~m- 94 (148)
T 3lv9_A 40 ESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKI------------------------NENKIELEEIL- 94 (148)
T ss_dssp TTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHH------------------------HHSCCCGGGTC-
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh------------------------cCCCccHHHhc-
Confidence 346899999999999999999999 5 8999 99999884210 00156899999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 95 ~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 95 R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 6 7899999999999999999999999999998899999999999998663
No 59
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.65 E-value=9.1e-16 Score=108.71 Aligned_cols=112 Identities=16% Similarity=0.178 Sum_probs=97.2
Q ss_pred cccccccccC----CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---cccccccccc
Q 029781 73 YTVGDFMTKK----EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNLY 145 (188)
Q Consensus 73 ~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~~ 145 (188)
.+++++|.+. .++.++.+++++.+|++.|.+++++.+||.+ +|+++|+||.+|+++++.... ...++.++|.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 85 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMT 85 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSB
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcC
Confidence 5799999952 2569999999999999999999999999966 799999999999997664432 3456788887
Q ss_pred cCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 146 FGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 146 ~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
+.+. +.+++++.+++++|.+++...+||++++.+.|++|.
T Consensus 86 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~ 126 (157)
T 4fry_A 86 AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISI 126 (157)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred CCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEH
Confidence 7666 999999999999999999999999999999999985
No 60
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.65 E-value=9.1e-16 Score=108.58 Aligned_cols=114 Identities=16% Similarity=0.086 Sum_probs=95.4
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc-------Cccccccc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS-------GSMRKLGF 142 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~-------~~~~~~~~ 142 (188)
....+++++|.+..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..|++++.... ....++.+
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 87 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE 87 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH
Confidence 34678999998533678999999999999999999999999999889999999999999765431 13445788
Q ss_pred ccccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 143 NLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 143 ~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+|.+.+. +.+++++.+++++|.+++. +||++ ++.+.|+||.
T Consensus 88 ~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 88 VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTR 130 (157)
T ss_dssp TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEH
T ss_pred HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEH
Confidence 8876665 9999999999999998887 78887 5899999985
No 61
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.64 E-value=4.6e-16 Score=109.24 Aligned_cols=119 Identities=20% Similarity=0.211 Sum_probs=90.4
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++.............+. .........++.++|.+
T Consensus 22 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v~~~m~~ 93 (152)
T 4gqw_A 22 PTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQ--------KLLSKTNGKLVGDLMTP 93 (152)
T ss_dssp TTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHH--------TC-----CCBHHHHSEE
T ss_pred CCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHH--------HHHHHhccccHHHhcCC
Confidence 346899999999999999999999 78999 99999985321100000000000 00122345789999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|+++++..
T Consensus 94 --~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 94 --APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp --SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred --CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 89999999999999999999999999999988999999999999987643
No 62
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.64 E-value=4e-16 Score=108.62 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=87.4
Q ss_pred cccHHHHHHHHhcCcccCCceee-cC--ceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LP--ITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~--~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
-.++.+|+++|.+++++.+||+| ++ +++ +|.+|+++... .......++.++|.
T Consensus 21 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~----------------------~~~~~~~~v~~~m~ 78 (141)
T 2rih_A 21 TATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVA----------------------QRLDLDGPAMPIAN 78 (141)
T ss_dssp TCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHH----------------------TTCCTTSBSGGGCB
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHh----------------------cCCCCCCCHHHHcC
Confidence 46899999999999999999999 66 888 99999874210 01123568999999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ ++.++.++ ++.++++.|.+++.+.+||+|++|+++|+||..|++++..
T Consensus 79 ~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 79 S--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp C--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred C--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 8 89999999 9999999999999999999998899999999999997653
No 63
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.64 E-value=3.3e-16 Score=107.89 Aligned_cols=103 Identities=21% Similarity=0.242 Sum_probs=88.9
Q ss_pred cccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccCC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKE 83 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~ 83 (188)
-.++.+|+++|.+++++.+||+|+|+++ +|.+|+.+... .......++.++|.+
T Consensus 20 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~----------------------~~~~~~~~v~~~~~~-- 75 (133)
T 2ef7_A 20 DAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIG----------------------KGKSLETKAEEFMTA-- 75 (133)
T ss_dssp TCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHH----------------------TTCCTTCBGGGTSEE--
T ss_pred CCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHh----------------------cCCCcccCHHHHcCC--
Confidence 4689999999999999999999988888 99999873210 011234689999998
Q ss_pred CeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 84 ~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 8999999999999999999999999999998899999999999998764
No 64
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.64 E-value=9.1e-16 Score=108.99 Aligned_cols=114 Identities=15% Similarity=0.090 Sum_probs=96.6
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc-------Cccccccc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS-------GSMRKLGF 142 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~-------~~~~~~~~ 142 (188)
....+++++|.+..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..|+++..... ....++.+
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~ 90 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEE 90 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHH
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHH
Confidence 34679999997644588999999999999999999999999999889999999999999876442 23455788
Q ss_pred ccccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 143 NLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 143 ~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+|.+.+. +.+++++.+++++|.+++. +||++ ++.+.|+||.
T Consensus 91 ~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 91 VMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTR 133 (159)
T ss_dssp HSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEH
T ss_pred hcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEH
Confidence 8876655 9999999999999998876 78888 6899999985
No 65
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.63 E-value=2.4e-15 Score=106.13 Aligned_cols=112 Identities=20% Similarity=0.242 Sum_probs=95.5
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---cccccccccc-
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNLY- 145 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~~- 145 (188)
....+++++ + ++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++...... ...++.++|.
T Consensus 20 l~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~ 95 (152)
T 2uv4_A 20 LEELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH 95 (152)
T ss_dssp HHHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGT
T ss_pred HHHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhh
Confidence 345677887 5 7899999999999999999999999999998899999999999998765432 2345778884
Q ss_pred ------cCcccCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 146 ------FGFNSGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 146 ------~~~~~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
+...+.+++++.+++++|.+++...+||+++ +.+.|+||.
T Consensus 96 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~ 142 (152)
T 2uv4_A 96 RSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSL 142 (152)
T ss_dssp CCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred hhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEH
Confidence 4445999999999999999999999999985 899999985
No 66
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.63 E-value=1.9e-15 Score=105.19 Aligned_cols=112 Identities=17% Similarity=0.267 Sum_probs=94.6
Q ss_pred Cccccc---ccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc---Ccccccccccc
Q 029781 72 TYTVGD---FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS---GSMRKLGFNLY 145 (188)
Q Consensus 72 ~~~v~~---im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~---~~~~~~~~~~~ 145 (188)
..++++ +|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|++|.+|++++.... ....++.++|.
T Consensus 7 ~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 84 (144)
T 2nyc_A 7 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALM 84 (144)
T ss_dssp GSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHH
T ss_pred hcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHh
Confidence 346666 8877 899999999999999999999999999999889999999999999866532 12345677775
Q ss_pred c-------CcccCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 146 F-------GFNSGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 146 ~-------~~~~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+ ...+.+++++.+++++|.+++...+||++ ++.+.|+||.
T Consensus 85 ~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 85 RRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp HCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred cCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEH
Confidence 4 34499999999999999999999999998 5899999985
No 67
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.62 E-value=4.8e-16 Score=112.26 Aligned_cols=126 Identities=18% Similarity=0.226 Sum_probs=90.4
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccc-cchhhhhhhccCCCCC-----CCCCCCCCCccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFT-VSREVKAFAHNGVGIT-----NSVPPRNGTYTV 75 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v 75 (188)
.-.++.+|+++|.+++++++||+| +|+++ +|.+|+++...... .......+........ ..........++
T Consensus 21 ~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 100 (180)
T 3sl7_A 21 PSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVV 100 (180)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCCSHHHHHHHHHTTTTCBH
T ss_pred CCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhhhhHHHHHHHhccccccH
Confidence 447899999999999999999999 88999 99999984210000 0000000000000000 000012235689
Q ss_pred ccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 76 ~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
.++|.+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 101 ~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 101 GDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp HHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 999998 8999999999999999999999999999998899999999999998764
No 68
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.62 E-value=4.4e-16 Score=105.96 Aligned_cols=104 Identities=20% Similarity=0.210 Sum_probs=88.8
Q ss_pred ccccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
.-.++.+|+++|.+++++.+||+|+|+++ +|.+|+.+.... .......++.++|.+
T Consensus 16 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~---------------------~~~~~~~~v~~~m~~- 73 (125)
T 1pbj_A 16 ITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAE---------------------GDDLAEVKVWEVMER- 73 (125)
T ss_dssp TTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHH---------------------TCCTTTSBHHHHCBC-
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhc---------------------CCcccccCHHHHcCC-
Confidence 34689999999999999999999988888 999998732100 012235689999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|+ |+++|++|..|+++++.
T Consensus 74 -~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 74 -DLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp -GGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred -CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 8999999999999999999999999999997 99999999999998764
No 69
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.62 E-value=7.4e-16 Score=108.30 Aligned_cols=109 Identities=13% Similarity=0.109 Sum_probs=89.2
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++++||+| +|+++ +|.+|+++....... .........++.++|.+
T Consensus 32 ~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~----------------~~~~~~~~~~v~~~m~~ 95 (150)
T 3lqn_A 32 IGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLER----------------IEFERLEEMKVEQVMKQ 95 (150)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSS----------------BCGGGGGGCBGGGTCBS
T ss_pred CCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcc----------------cchhHHhcCCHHHHhcC
Confidence 346899999999999999999999 89999 999999843211000 00012346789999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++.+++++.++++.|.+++. +||+|++|+++|+||..|+++++..
T Consensus 96 --~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 96 --DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp --SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred --CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 89999999999999999999886 9999988999999999999987643
No 70
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.62 E-value=4.6e-15 Score=110.58 Aligned_cols=109 Identities=21% Similarity=0.159 Sum_probs=96.8
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccccCcc-
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFN- 149 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~- 149 (188)
...+++++|.+ ++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++... ..++.++|.+.+.
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~----~~~v~~im~~~~~~ 84 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL----DSSVFNKVSLPDFF 84 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT----TSBSGGGCBCTTCC
T ss_pred cccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC----CCcHHHHccCCCEE
Confidence 34578999999 9999999999999999999999999999998899999999999987653 3457888987665
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
+.+++++.++.++|.+++...+||+++ +.+.|++|.
T Consensus 85 v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~ 121 (213)
T 1vr9_A 85 VHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSL 121 (213)
T ss_dssp EETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEH
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEH
Confidence 999999999999999999999999986 899999985
No 71
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.62 E-value=1.3e-15 Score=108.15 Aligned_cols=97 Identities=14% Similarity=0.098 Sum_probs=84.3
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||+| + ++++ +|.+|+++... .. ...+++++|.
T Consensus 55 ~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~-----------------------~~-~~~~v~~im~ 110 (156)
T 3oi8_A 55 ENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMF-----------------------NP-EQFHLKSILR 110 (156)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSS-----------------------CG-GGCCHHHHCB
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH-----------------------cC-CcccHHHHcC
Confidence 457899999999999999999999 5 4899 99999984210 11 4568999996
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~ 128 (188)
++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++
T Consensus 111 ---~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 111 ---PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp ---CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred ---CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 478999999999999999999999999999889999999999986
No 72
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.62 E-value=1.6e-15 Score=112.51 Aligned_cols=100 Identities=19% Similarity=0.156 Sum_probs=88.8
Q ss_pred ccccHHHHHHHHhcC---cccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccc
Q 029781 5 SIPSCLTLARLNANG---VINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDF 78 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~---~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 78 (188)
.-.|+.+|++.|.++ ++..+||+| +|+++ +|.+|++. .....+++++
T Consensus 69 ~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~---------------------------~~~~~~v~~i 121 (205)
T 3kxr_A 69 DKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFK---------------------------HEPHEPLISL 121 (205)
T ss_dssp TTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTT---------------------------SCTTSBGGGG
T ss_pred CCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHh---------------------------CCCcchHHHH
Confidence 346899999999987 789999999 89999 99999872 1235689999
Q ss_pred cccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 79 m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
|.+ ++.++++++++.++++.|.+++...+||+|++|+++|+||..|++..+..
T Consensus 122 m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 122 LSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp CCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 998 89999999999999999999999999999999999999999999987643
No 73
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.62 E-value=6.2e-16 Score=106.82 Aligned_cols=104 Identities=21% Similarity=0.246 Sum_probs=88.8
Q ss_pred cccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccCC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKE 83 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~ 83 (188)
-.++.+|+++|.+++++++||+|+|+++ +|.+|+++.... ........++.++|.+
T Consensus 25 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~--------------------~~~~~~~~~v~~~m~~-- 82 (135)
T 2rc3_A 25 DDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYL--------------------LDKPVKDTQVKEIMTR-- 82 (135)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGG--------------------SSSCGGGSBGGGTSBC--
T ss_pred CCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHH--------------------cCCCcccCCHHHhccC--
Confidence 4689999999999999999999988888 999998731100 0012346789999998
Q ss_pred CeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 84 ~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+| +|+++|+||..|+++++.
T Consensus 83 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 83 QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 899999999999999999999999999999 799999999999998764
No 74
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.61 E-value=3.5e-16 Score=110.59 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=87.6
Q ss_pred ccccHHHHHHHHhcCcccCCcee-e--cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHL-Q--LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFM 79 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVv-d--~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im 79 (188)
.-.++.+|+++|.+++++++||+ + +|+++ +|.+|+++... .....+++++|
T Consensus 37 ~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~------------------------~~~~~~v~~~m 92 (153)
T 3oco_A 37 VDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR------------------------IDDKAKISTIM 92 (153)
T ss_dssp TTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH------------------------HHTTSBGGGTC
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh------------------------cCCCCcHHHHh
Confidence 34689999999999999999999 5 48898 99999884210 01156899999
Q ss_pred ccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 80 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 93 -~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 93 -R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp -B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred -C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 6 8999999999999999999999999999998899999999999998764
No 75
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.61 E-value=6.8e-16 Score=108.55 Aligned_cols=102 Identities=20% Similarity=0.123 Sum_probs=87.5
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-+++.+|+++|.+++++.+||+| +|+++ +|.+|+.+.... .......++.++|.+
T Consensus 45 ~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~---------------------~~~~~~~~v~~~m~~ 103 (149)
T 3k2v_A 45 LQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT---------------------GVDMRDASIADVMTR 103 (149)
T ss_dssp TTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS---------------------SSCCTTCBHHHHSEE
T ss_pred CCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc---------------------CCCcccCcHHHHcCC
Confidence 346899999999999999999999 88999 999998842110 112346789999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~ 130 (188)
++.++.+++++.++++.|.+++.+.+||+|++ +++|+||..|++++
T Consensus 104 --~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~a 149 (149)
T 3k2v_A 104 --GGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLRA 149 (149)
T ss_dssp --SCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTCC
T ss_pred --CCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhcC
Confidence 89999999999999999999999999999965 99999999999863
No 76
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.61 E-value=6e-16 Score=110.07 Aligned_cols=107 Identities=16% Similarity=0.139 Sum_probs=90.5
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++... ........++.++|.+.
T Consensus 32 ~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~---------------------~~~~~~~~~v~~~m~~~ 90 (159)
T 3fv6_A 32 NVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASI---------------------GQQELTSVPVHIIMTRM 90 (159)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHT---------------------SCSCTTTCBGGGTSEET
T ss_pred CCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhh---------------------ccCcccCcCHHHHHcCC
Confidence 46899999999999999999999 89999 99999884210 01233467899999864
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCC---cEEEEEehHHHhhchhc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW---KLVGVVSDYDLLALDSI 133 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~---~~~Giit~~dl~~~~~~ 133 (188)
.++.++.+++++.++++.|.+++.+.+||+|++| +++|+||..|+++++..
T Consensus 91 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 91 PNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 3578999999999999999999999999999877 99999999999987643
No 77
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.61 E-value=3.5e-15 Score=113.28 Aligned_cols=112 Identities=11% Similarity=0.113 Sum_probs=95.2
Q ss_pred CcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCc---------------
Q 029781 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGS--------------- 136 (188)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~--------------- 136 (188)
..+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|++|..|++++......
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~ 83 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNIL 83 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHH
Confidence 5689999998 89999999999999999999999999999988999999999999976532110
Q ss_pred --------------------------------------------------------------------------------
Q 029781 137 -------------------------------------------------------------------------------- 136 (188)
Q Consensus 137 -------------------------------------------------------------------------------- 136 (188)
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~ 163 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKN 163 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHc
Confidence
Q ss_pred --------------------ccccccccc-cCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 137 --------------------MRKLGFNLY-FGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 137 --------------------~~~~~~~~~-~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
..++.++|. ..+. +.+++++.++.++|.++++..+||++ ++.+.|++|.
T Consensus 164 ~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~ 235 (245)
T 3l2b_A 164 NITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIAR 235 (245)
T ss_dssp TCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEC
T ss_pred CCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEH
Confidence 123456676 4444 88899999999999999999999997 5899999985
No 78
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.61 E-value=7.3e-16 Score=106.73 Aligned_cols=103 Identities=25% Similarity=0.345 Sum_probs=88.0
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcc-cccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHL-SKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
-.++.+|.++|.+++++.+||+| +|+++ +|.+|+ .+... .......++.++|.+
T Consensus 24 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~----------------------~~~~~~~~v~~~m~~ 81 (138)
T 2p9m_A 24 HEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR----------------------DKYTLETTIGDVMTK 81 (138)
T ss_dssp TSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT----------------------TCCCSSCBHHHHSCS
T ss_pred CCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh----------------------hcccCCcCHHHHhCC
Confidence 45899999999999999999999 88999 999998 63210 122345689999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcC-----CCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKR-----ITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~-----~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++ .+.+||+|++|+++|+||..|+++++.
T Consensus 82 --~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 82 --DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp --SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred --CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 8999999999999999999999 999999998899999999999997653
No 79
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.61 E-value=9.9e-16 Score=105.46 Aligned_cols=104 Identities=19% Similarity=0.226 Sum_probs=88.4
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccc-cccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSK-RLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++ .... .......+++++|.
T Consensus 23 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---------------------~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 23 EHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA---------------------GLDPNTATAGELAR 81 (133)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG---------------------TCCTTTSBHHHHHT
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc---------------------CCCccccCHHHHhc
Confidence 346899999999999999999998 88999 99999872 1100 01223578999999
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ ++.++.+++++.++++.|.+++.+.+||+|+ |+++|+||..|+++++.
T Consensus 82 ~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 82 D--SIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp T--CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred C--CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 8 8999999999999999999999999999997 89999999999998653
No 80
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.61 E-value=1e-15 Score=107.99 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=88.0
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc-
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT- 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~- 80 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+.+.... . .......++.++|.
T Consensus 36 ~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~------------~--------~~~~~~~~v~~~m~~ 95 (152)
T 2uv4_A 36 TTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAE------------K--------TYNNLDVSVTKALQH 95 (152)
T ss_dssp TTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHC------------S--------SCCCTTSBGGGGGGT
T ss_pred CCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcc------------h--------hhhhhcchHHHHHhh
Confidence 346899999999999999999999 88999 999998742110 0 01123467889996
Q ss_pred -----cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhch
Q 029781 81 -----KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (188)
Q Consensus 81 -----~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~ 131 (188)
+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++
T Consensus 96 ~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 96 RSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp CCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred hhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 5 789999999999999999999999999999889999999999999765
No 81
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.60 E-value=1.6e-15 Score=105.06 Aligned_cols=104 Identities=25% Similarity=0.295 Sum_probs=88.8
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-.++.+|+++|.+++++++||+| +|+++ +|.+|+++.... .......++.++|.+
T Consensus 23 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~---------------------~~~~~~~~v~~~m~~- 80 (138)
T 2yzi_A 23 STSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIV---------------------PGLPYDIPVERIMTR- 80 (138)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT---------------------TCCCTTSBGGGTCBC-
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh---------------------cCCcccCCHHHHhhC-
Confidence 46899999999999999999999 89999 999998621100 011345789999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++.+++++.++++.|.+++.+++ |+|++|+++|+||..|+++++..
T Consensus 81 -~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 81 -NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp -SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred -CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 89999999999999999999999999 99988999999999999987653
No 82
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.60 E-value=2e-15 Score=109.87 Aligned_cols=105 Identities=18% Similarity=0.172 Sum_probs=89.8
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-+++.+|+++|.+++++++||+| +|+++ +|.+|+++.... ........+++++|.+
T Consensus 25 ~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~--------------------~~~~~~~~~v~~im~~- 83 (184)
T 1pvm_A 25 NTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIP--------------------RNKKPDEVPIRLVMRK- 83 (184)
T ss_dssp TCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGG--------------------GCCCGGGSBGGGTSBS-
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhh--------------------cccCcccCCHHHHhCC-
Confidence 35799999999999999999999 78999 999998842110 0112345689999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 84 -~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 84 -PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp -SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred -CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 8999999999999999999999999999998899999999999998664
No 83
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=1.2e-15 Score=109.22 Aligned_cols=106 Identities=20% Similarity=0.118 Sum_probs=89.9
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++.... . .......++.++|.+
T Consensus 42 ~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~------------~--------~~~~~~~~v~~~m~~ 101 (165)
T 3fhm_A 42 PDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAG------------Q--------GAASLQQSVSVAMTK 101 (165)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH------------H--------GGGGGTSBGGGTSBS
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHh------------c--------CCccccCCHHHHhcC
Confidence 346899999999999999999999 88999 999998742110 0 012335689999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++.+++++.++++.|.+++.+.+||+|+ |+++|+||..|+++++..
T Consensus 102 --~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 102 --NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp --SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred --CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 8999999999999999999999999999998 999999999999987643
No 84
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.60 E-value=1e-14 Score=111.26 Aligned_cols=115 Identities=13% Similarity=0.121 Sum_probs=95.4
Q ss_pred CCCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC--CcEEEEEehHHHhhchhcc-----C------
Q 029781 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD--WKLVGVVSDYDLLALDSIS-----G------ 135 (188)
Q Consensus 69 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~--~~~~Giit~~dl~~~~~~~-----~------ 135 (188)
....++++|+|++ +++++.+++++.+|.++|.+++++.+||+|++ ++++|+||+.||++++... .
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~ 86 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAA 86 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCC
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhh
Confidence 3446799999999 99999999999999999999999999999864 6899999999998654211 0
Q ss_pred --------------------------------------------------------------------------------
Q 029781 136 -------------------------------------------------------------------------------- 135 (188)
Q Consensus 136 -------------------------------------------------------------------------------- 135 (188)
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (250)
T 2d4z_A 87 EADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASR 166 (250)
T ss_dssp CBCCC---------------------------------------------------------------------------
T ss_pred cccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcc
Confidence
Q ss_pred -----------------ccccc--c-cccccCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEeeceeec
Q 029781 136 -----------------SMRKL--G-FNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMTANIISS 185 (188)
Q Consensus 136 -----------------~~~~~--~-~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~~giit~ 185 (188)
...++ . .+|.+.++ +.+++++.++..+|...+.++++|++.|.+.||||.
T Consensus 167 ~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTr 237 (250)
T 2d4z_A 167 FEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVAL 237 (250)
T ss_dssp CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred cccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEH
Confidence 00011 1 24666666 899999999999999999999999999999999985
No 85
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.59 E-value=5.6e-15 Score=114.91 Aligned_cols=110 Identities=19% Similarity=0.118 Sum_probs=97.7
Q ss_pred CCCcccccccccCCCeeEEcCCCCHHHHHHHHHhc-----CCCeEEEEcCCCcEEEEEehHHHhhchhccCccccccccc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-----RITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNL 144 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~ 144 (188)
....+++++|++ +++++++++++.++++.|.++ +++.+||+|++|+++|+||.+|++... ...++.++|
T Consensus 134 ~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~----~~~~v~~im 207 (286)
T 2oux_A 134 YEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND----DDTLIADIL 207 (286)
T ss_dssp SCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC----TTSBHHHHS
T ss_pred CChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC----CCCcHHHHc
Confidence 456799999998 999999999999999999987 788899999889999999999998753 345578888
Q ss_pred ccCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 145 YFGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 145 ~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+.+. +.+++++.++.++|.+++...+||++ +|.+.|+||.
T Consensus 208 ~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~ 250 (286)
T 2oux_A 208 NERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTV 250 (286)
T ss_dssp BSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEH
T ss_pred CCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEH
Confidence 76555 99999999999999999999999998 5899999985
No 86
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.59 E-value=1.3e-15 Score=107.96 Aligned_cols=107 Identities=20% Similarity=0.239 Sum_probs=90.7
Q ss_pred ccccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
.-.++.+|+++|.+++++.+||.++|+++ +|.+|+++.... ........+++++|.+
T Consensus 28 ~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~--------------------~~~~~~~~~v~~~m~~- 86 (157)
T 4fry_A 28 KNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVL--------------------QERSSKATRVEEIMTA- 86 (157)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGG--------------------GTCCSSSCBHHHHSBS-
T ss_pred CCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHh--------------------ccCCccccCHHHHcCC-
Confidence 34789999999999999999997789999 999998842210 0112346789999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhcc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~ 134 (188)
++.++.+++++.++++.|.+++.+.+||+| +|+++|+||..|+++++...
T Consensus 87 -~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 87 -KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp -SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred -CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 899999999999999999999999999999 79999999999999877543
No 87
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.59 E-value=1.5e-14 Score=111.92 Aligned_cols=109 Identities=21% Similarity=0.208 Sum_probs=96.6
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhc-----CCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-----RITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLY 145 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~ 145 (188)
...+++++|++ ++.++.+++++.++++.|.++ +++.+||+|++|+++|+||.+|++... ...++.++|.
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~----~~~~v~~im~ 206 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----PRTRVAEIMN 206 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC----TTCBSTTTSB
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC----CCCcHHHHhC
Confidence 45689999999 999999999999999999987 789999999889999999999998652 3456788996
Q ss_pred cCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 146 FGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 146 ~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+. +.+++++.+++++|.+++...+||++ +|.+.|+||.
T Consensus 207 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~ 248 (278)
T 2yvy_A 207 PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTV 248 (278)
T ss_dssp SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEH
Confidence 5555 99999999999999999999999998 5899999984
No 88
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.58 E-value=2e-15 Score=107.46 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=88.6
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++.... .+.... .........++.++|.+
T Consensus 20 ~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~--------~~~~~~-----~~~~~~~~~~v~~im~~ 86 (160)
T 2o16_A 20 RTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQES--------SLQRSA-----QGDSLAFETPLFEVMHT 86 (160)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH--------HCC--------------CCCBHHHHSCS
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHH--------hhcccc-----cccchhcccCHHHHhcC
Confidence 346899999999999999999999 88999 999998742110 000000 00012346789999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.+++.+.+||+|+ |+++|+||..|+++++.
T Consensus 87 --~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~ 134 (160)
T 2o16_A 87 --DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAI 134 (160)
T ss_dssp --CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHH
T ss_pred --CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 8999999999999999999999999999997 99999999999998653
No 89
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.57 E-value=1.6e-15 Score=107.29 Aligned_cols=107 Identities=15% Similarity=0.130 Sum_probs=86.8
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-.++.+|+++|.+++++++||+| +|+++ +|.+|+++.... .. .........++.++|.+
T Consensus 33 ~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~------------~~-----~~~~~~~~~~v~~~m~~- 94 (156)
T 3ctu_A 33 THNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME------------HD-----LSQEIMADTDIVHMTKT- 94 (156)
T ss_dssp TSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH------------HT-----CCHHHHTTSBGGGGCBC-
T ss_pred CCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh------------cc-----ccccccccCcHHHhccC-
Confidence 46789999999999999999999 89999 999998842210 00 00011225689999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++.+++++.++++.|.+++ .+||+|++|+++|+||..|+++++..
T Consensus 95 -~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~ 142 (156)
T 3ctu_A 95 -DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp -SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHH
T ss_pred -CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 8999999999999999999886 79999988999999999999987754
No 90
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.56 E-value=5.9e-15 Score=104.35 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=88.5
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+++...... . .........++.++|.+
T Consensus 28 ~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~------~----------~~~~~~~~~~v~~~m~~ 91 (157)
T 2emq_A 28 PGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLE------R----------IEFERLETMKVEEVMNR 91 (157)
T ss_dssp TTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSS------S----------BCGGGGGTCBGGGTCBC
T ss_pred CCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhccc------c----------cchHHhcCCcHHHHhCC
Confidence 346899999999999999999999 88999 99999874221100 0 00012235689999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++.+++++.++++.|.+++. +||+|++|+++|+||..|+++++..
T Consensus 92 --~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 92 --NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp --CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred --CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 89999999999999999999987 9999988999999999999987653
No 91
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.56 E-value=2.6e-15 Score=108.51 Aligned_cols=100 Identities=15% Similarity=0.091 Sum_probs=84.4
Q ss_pred ccccHHHHHHHHhcCcccCCceee-c-CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-L-PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~-~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
.-.++.+|+++|.+++++++||++ + |+++ +|.+|+++... .....++. +|
T Consensus 53 ~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~------------------------~~~~~~v~-~~- 106 (173)
T 3ocm_A 53 IDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI------------------------TEGRVRRN-RL- 106 (173)
T ss_dssp TTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH------------------------HHSSCCGG-GS-
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh------------------------cCCcchhH-hc-
Confidence 346899999999999999999998 5 7999 99999884210 00134566 44
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.
T Consensus 107 ~--~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 107 R--DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIA 156 (173)
T ss_dssp B--CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHH
T ss_pred C--CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHh
Confidence 5 6889999999999999999999999999998899999999999998764
No 92
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.55 E-value=3e-15 Score=104.20 Aligned_cols=108 Identities=16% Similarity=0.247 Sum_probs=86.9
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++.+||+| +|+++ +|.+|+.+.... ........++.++|.+
T Consensus 26 ~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~--------------------~~~~~~~~~v~~~m~~ 85 (144)
T 2nyc_A 26 MTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG--------------------GIYNDLSLSVGEALMR 85 (144)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHT--------------------C----CCSBHHHHHHH
T ss_pred CCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcc--------------------cccccCCccHHHHHhc
Confidence 346899999999999999999999 88999 999998742100 0011235689999975
Q ss_pred CC----CeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KE----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~----~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
.. ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 86 ~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 86 RSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp CC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 21 4789999999999999999999999999998899999999999998764
No 93
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.55 E-value=3.5e-15 Score=105.95 Aligned_cols=108 Identities=9% Similarity=0.023 Sum_probs=87.8
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-+++.+|+++|.+++++.+||+| +|+++ +|.+|+++...... . .........++.++|.+
T Consensus 31 ~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~-------------~---~~~~~~~~~~v~~~m~~ 94 (159)
T 1yav_A 31 VGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLE-------------R---IEFEKLDQITVEEVMLT 94 (159)
T ss_dssp TTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSS-------------S---BCGGGTTTSBHHHHSBC
T ss_pred CCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhc-------------c---cchhhhccCCHHHhcCC
Confidence 346899999999999999999999 78999 99999884221000 0 00011345789999998
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++.+++++.++++.|.++++ +||+|++|+++|+||..|+++++.
T Consensus 95 --~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 95 --DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp --SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred --CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHH
Confidence 89999999999999999998876 999998899999999999998764
No 94
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.55 E-value=7.1e-15 Score=125.59 Aligned_cols=115 Identities=15% Similarity=0.036 Sum_probs=98.0
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHH-hcCCCeEEEEcCCCcEEEEEehHHHhhchhccCc-------------
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLV-EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGS------------- 136 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~-~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~------------- 136 (188)
...+++|+|++++++.++++++++.|+.+.|. +++++.+||+|++++++|+||.+|+++.......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 57899999994448999999999999999999 7999999999988999999999999976543210
Q ss_pred ------------------------------------ccccccccccCcc-cCCcchHHHHHHHHhccCceEEEEEeCCEe
Q 029781 137 ------------------------------------MRKLGFNLYFGFN-SGNAYFARWLLKFVGGINCGFLLTVEGAMT 179 (188)
Q Consensus 137 ------------------------------------~~~~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~~~~ 179 (188)
..++.++|.+.+. +++++++.++.++|.+++.+.+||++++.+
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G~l 610 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTERGKL 610 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEETTEE
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEECCEE
Confidence 0014567876666 999999999999999999999999999999
Q ss_pred eceeec
Q 029781 180 ANIISS 185 (188)
Q Consensus 180 ~giit~ 185 (188)
.|+||.
T Consensus 611 vGIVT~ 616 (632)
T 3org_A 611 VGIVER 616 (632)
T ss_dssp EEEEEG
T ss_pred EEEEeh
Confidence 999986
No 95
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.53 E-value=6.9e-15 Score=111.68 Aligned_cols=58 Identities=31% Similarity=0.539 Sum_probs=49.3
Q ss_pred Ccccccccc-cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhch
Q 029781 72 TYTVGDFMT-KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (188)
Q Consensus 72 ~~~v~~im~-~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~ 131 (188)
..+++++|+ + ++.++++++++.++++.|.+++++++||+|++|+++|+||.+|++++.
T Consensus 184 ~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 184 SLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp GSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred CCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 467999999 6 899999999999999999999999999999889999999999998764
No 96
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.52 E-value=1.2e-14 Score=105.48 Aligned_cols=123 Identities=12% Similarity=0.129 Sum_probs=90.9
Q ss_pred ccccHHHHHHHHhcCcccCCcee--e-cCceE--ecCCcccccccccc-----c-chhhhhhhccCCCCCCCCCCCCCCc
Q 029781 5 SIPSCLTLARLNANGVINSVPHL--Q-LPITV--ATPSHLSKRLRFFT-----V-SREVKAFAHNGVGITNSVPPRNGTY 73 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVv--d-~~~l~--vt~~dl~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (188)
.-.++.+|+++|.+++++++||+ | +|+++ +|.+|+++...... . ......+.... . ..........
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~ 108 (185)
T 2j9l_A 32 DSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHS-P--PLPPYTPPTL 108 (185)
T ss_dssp SCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSC-C--CCCTTCCCCE
T ss_pred CCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccccceeecccCC-c--ccccccccCc
Confidence 34689999999999999999999 6 88999 99999884321000 0 00000000000 0 0000123457
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++.++|.+ ++.++.+++++.++++.|.+++.+.+||+| +|+++|+||..|+++++..
T Consensus 109 ~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 109 KLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp ECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred cHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 89999998 899999999999999999999999999999 7999999999999987654
No 97
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.52 E-value=1.6e-14 Score=112.24 Aligned_cols=99 Identities=15% Similarity=0.174 Sum_probs=88.1
Q ss_pred ccccHHHHHHHHhcC-----cccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccc
Q 029781 5 SIPSCLTLARLNANG-----VINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVG 76 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~-----~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 76 (188)
.-.++.+|++.|.++ +++++||+| +|+++ +|.+|++. .....++.
T Consensus 152 ~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~---------------------------~~~~~~v~ 204 (286)
T 2oux_A 152 ANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIV---------------------------NDDDTLIA 204 (286)
T ss_dssp SSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTT---------------------------SCTTSBHH
T ss_pred CCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHc---------------------------CCCCCcHH
Confidence 346899999999987 788899999 89999 99999882 12356899
Q ss_pred cccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 77 ~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+.
T Consensus 205 ~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 205 DILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp HHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 99998 8999999999999999999999999999998899999999999998764
No 98
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.52 E-value=1.9e-14 Score=102.02 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=88.1
Q ss_pred ccccHHHHHHHHhcCcccC-CceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINS-VPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~-~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-.++.+|+++|.+++++. +||+|+++++ +|.+|+++.... .. ...+.... . ...........++.++|.+
T Consensus 31 ~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~---~~-~~~~~~~~-~-~~~~~~~~~~~~v~~im~~ 104 (157)
T 1o50_A 31 EDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGF---HF-FGFIPKEE-L-IRSSMKRLIAKNASEIMLD 104 (157)
T ss_dssp TTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHH---HH-HCCCC---------CCCCCSSCBHHHHCBC
T ss_pred CCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhh---hH-HhhhccHH-H-HHHHHHHHcCCcHHHHcCC
Confidence 3468999999999999999 9999944888 999998842110 00 00000000 0 0000112346789999985
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++++.
T Consensus 105 ---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 105 ---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp ---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 788999999999999999999999999998899999999999998764
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.52 E-value=3.3e-14 Score=119.18 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=97.0
Q ss_pred CCCcccccccccCCCeeEEcCC-CCHHHHHHHHHhcCCCeEEEEc-CCCcEEEEEehHHHhhchhcc--Ccccccccccc
Q 029781 70 NGTYTVGDFMTKKEDLHAVKTT-TTVDEALERLVEKRITGFPVID-DDWKLVGVVSDYDLLALDSIS--GSMRKLGFNLY 145 (188)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~-~~l~~~~~~m~~~~~~~~pVvd-~~~~~~Giit~~dl~~~~~~~--~~~~~~~~~~~ 145 (188)
....+++++|++ ++.++.++ +++.++++.|.+++++++||+| ++|+++|+||.+|+++.+... ....++.++|.
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~ 458 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALN 458 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhc
Confidence 456899999998 89999999 9999999999999999999999 789999999999999776543 23456899997
Q ss_pred cCcc-cCCcchHHHHHHHHhccCceEEEEEeC-----CEeeceeec
Q 029781 146 FGFN-SGNAYFARWLLKFVGGINCGFLLTVEG-----AMTANIISS 185 (188)
Q Consensus 146 ~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~~-----~~~~giit~ 185 (188)
+.+. +.+++++.++.++|.+++. +||+++ +.+.||||.
T Consensus 459 ~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~ 502 (527)
T 3pc3_A 459 KRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATK 502 (527)
T ss_dssp TTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEH
T ss_pred CCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEH
Confidence 7666 9999999999999987665 588876 899999985
No 100
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.50 E-value=1.5e-13 Score=114.60 Aligned_cols=102 Identities=23% Similarity=0.249 Sum_probs=89.5
Q ss_pred ccccHHHHHHHHhcCcccCCceee---cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ---LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFM 79 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd---~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im 79 (188)
.-.++.++.++|.+++++++||+| +++++ +|.+|++. ......++.++|
T Consensus 128 ~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~--------------------------~~~~~~~V~~vM 181 (511)
T 3usb_A 128 PEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF--------------------------IQDYSIKISDVM 181 (511)
T ss_dssp TTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT--------------------------CCCSSSBHHHHC
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh--------------------------hccCCCcHHHhc
Confidence 346899999999999999999998 46888 99999872 123467899999
Q ss_pred ccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 80 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
++ .++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++....
T Consensus 182 ~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 182 TK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred cc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 85 267899999999999999999999999999999999999999999987754
No 101
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.50 E-value=3e-14 Score=110.25 Aligned_cols=98 Identities=19% Similarity=0.208 Sum_probs=86.8
Q ss_pred cccHHHHHHHHhcC-----cccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccc
Q 029781 6 IPSCLTLARLNANG-----VINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGD 77 (188)
Q Consensus 6 ~~sv~~a~~~m~~~-----~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 77 (188)
-.++.+|++.|.++ ++..+||+| +|+++ +|.+|++. .....++.+
T Consensus 151 ~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~---------------------------~~~~~~v~~ 203 (278)
T 2yvy_A 151 GMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIV---------------------------ADPRTRVAE 203 (278)
T ss_dssp TSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHH---------------------------SCTTCBSTT
T ss_pred CCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhc---------------------------CCCCCcHHH
Confidence 45899999999987 789999999 88999 99999872 123568999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 78 im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+|.+ ++.++++++++.++++.|.+++...+||+|++|+++|+||..|++..+.
T Consensus 204 im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 204 IMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-
T ss_pred HhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHH
Confidence 9988 8999999999999999999999999999998899999999999998764
No 102
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.49 E-value=1.7e-13 Score=113.44 Aligned_cols=109 Identities=21% Similarity=0.208 Sum_probs=96.5
Q ss_pred CCcccccccccCCCeeEEcCCCCHHHHHHHHHhc-----CCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccc
Q 029781 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-----RITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLY 145 (188)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~ 145 (188)
...+++++|++ ++.++++++++.++++.|.++ +++++||+|++++++|++|.+|++... ...++.++|.
T Consensus 153 ~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~----~~~~v~dim~ 226 (473)
T 2zy9_A 153 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD----PRTRVAEIMN 226 (473)
T ss_dssp CTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSC----TTSBGGGTSB
T ss_pred CCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCC----CCCcHHHHhC
Confidence 46789999999 999999999999999999986 578999999889999999999998742 3456889996
Q ss_pred cCcc-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 146 FGFN-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 146 ~~~~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+. +++++++.++.+.|.+++...+||+| ++.+.|+||.
T Consensus 227 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~ 268 (473)
T 2zy9_A 227 PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTV 268 (473)
T ss_dssp SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEeh
Confidence 5555 99999999999999999999999998 5899999984
No 103
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.48 E-value=3.7e-14 Score=100.79 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=86.7
Q ss_pred ccccHHHHHHHHhcCcccCCceee---cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ---LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFM 79 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd---~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im 79 (188)
.-.++.+|+++|.+++++++||+| +|+++ +|.+|+.+.... .. .........++.++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~------------~~-----~~~~~~~~~~v~~~m 90 (164)
T 2pfi_A 28 KDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQA------------EP-----PSRAPGHQQCLQDIL 90 (164)
T ss_dssp TTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC------------------------CCCCBHHHHH
T ss_pred CCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHh------------hc-----cccCCcccchhhhhh
Confidence 346899999999999999999998 47888 999998742110 00 000111345788999
Q ss_pred ccCCC------eeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 80 TKKED------LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 80 ~~~~~------~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
.+ + +.++.+++++.++++.|.+++.+.+||+| +|+++|+||..|+++++..
T Consensus 91 ~~--~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 91 AR--GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp HT--TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred cc--cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 87 5 78999999999999999999999999999 7999999999999987643
No 104
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.48 E-value=5.4e-15 Score=123.19 Aligned_cols=141 Identities=17% Similarity=0.089 Sum_probs=15.0
Q ss_pred cccHHHHHHHHhcCcccCCceee-c---CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-L---PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFM 79 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~---~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im 79 (188)
-.++.+|+++|.+++++++||+| + ++++ +|.+|++.. ......++.++|
T Consensus 113 ~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-------------------------~~~~~~~V~diM 167 (503)
T 1me8_A 113 DQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-------------------------LTQTETKVSDMM 167 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-------------------------hccccCcHHHHh
Confidence 46889999999999999999999 5 7899 999998721 112356899999
Q ss_pred ccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCccc-ccccccccCcccCCcchHHH
Q 029781 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMR-KLGFNLYFGFNSGNAYFARW 158 (188)
Q Consensus 80 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (188)
++..++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++......... ....++.. ..+... ...+
T Consensus 168 ~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~~~d~~~~l~v~-a~v~~~-~~~e 245 (503)
T 1me8_A 168 TPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNELVDSQKRYLVG-AGINTR-DFRE 245 (503)
T ss_dssp ------------------------------------------------------CCCCBCTTSCBCCE-EEECSS-SHHH
T ss_pred CCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccchhccccccccc-cccCch-hHHH
Confidence 98222999999999999999999999999999999999999999999998765322211 11112111 112333 3333
Q ss_pred HHHHHhccCceEEEE
Q 029781 159 LLKFVGGINCGFLLT 173 (188)
Q Consensus 159 v~~~l~~~~~~~~~v 173 (188)
..+.+.+.+...+++
T Consensus 246 ~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 246 RVPALVEAGADVLCI 260 (503)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHhhhccceEE
Confidence 456666678877555
No 105
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.46 E-value=3.5e-14 Score=118.00 Aligned_cols=102 Identities=23% Similarity=0.259 Sum_probs=78.0
Q ss_pred ccccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTK 81 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 81 (188)
.-+++.++.++|.+++++++||+| +++++ ||.+|++. ......++.++|++
T Consensus 104 ~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~--------------------------~~~~~~~v~diM~p 157 (496)
T 4fxs_A 104 PEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRF--------------------------VTDLTKSVAAVMTP 157 (496)
T ss_dssp SSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTT--------------------------CCCTTSBGGGTSEE
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhh--------------------------cccCCCcHHHHhcC
Confidence 347899999999999999999999 88999 99999871 12345689999993
Q ss_pred CCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 82 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
..++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++...
T Consensus 158 ~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 158 KERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp GGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 224889999999999999999999999999999999999999999998654
No 106
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.45 E-value=2.7e-14 Score=118.50 Aligned_cols=101 Identities=24% Similarity=0.299 Sum_probs=0.0
Q ss_pred cccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccCC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKE 83 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~ 83 (188)
-.++.+|+++|.+++++++||+|+++++ +|.+|+.. ......++.++|++..
T Consensus 104 ~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~--------------------------~~~~~~~V~~vMtp~~ 157 (490)
T 4avf_A 104 STKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRV--------------------------KPNAGDTVAAIMTPKD 157 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhh--------------------------ccccCCcHHHHhccCC
Confidence 4678999999999999999999988899 99999861 1233568999999422
Q ss_pred CeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 84 ~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
++.++++++++.+++++|.+++.+.+||+|++|+++|+||.+|+++...
T Consensus 158 ~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 158 KLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -------------------------------------------------
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 4889999999999999999999999999999999999999999998754
No 107
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.42 E-value=2.4e-13 Score=116.17 Aligned_cols=125 Identities=14% Similarity=-0.005 Sum_probs=85.8
Q ss_pred ccccHHHHHHHHh-cCcccCCceee-cCceE--ecCCcccccccccccchhhh-------------hhhccCCCCCCC--
Q 029781 5 SIPSCLTLARLNA-NGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVK-------------AFAHNGVGITNS-- 65 (188)
Q Consensus 5 ~~~sv~~a~~~m~-~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-- 65 (188)
.-+++.++.+.|. +++++++||+| +++++ +|++|+++...........+ .+..........
T Consensus 470 ~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 549 (632)
T 3org_A 470 PDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETP 549 (632)
T ss_dssp SSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC----------------------------------
T ss_pred CCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhcccCCCCCc
Confidence 3568999999999 89999999999 78999 99999986422110000000 000000000000
Q ss_pred -----------CCCCCCCcccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 66 -----------VPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 66 -----------~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
........++.++|++ ++.++++++++.++.+.|.+++.+++||+ ++|+++|+||.+|+++...
T Consensus 550 ~~~~~~~~e~~~~~~~~~~~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 550 SGEHSSKGKRTATVLEPTSSLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp ---------------------CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECCC
T ss_pred ccchhhhcccceEeeccccccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHHh
Confidence 0000111248899999 99999999999999999999999999999 5799999999999998764
No 108
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.40 E-value=2.5e-13 Score=112.36 Aligned_cols=98 Identities=19% Similarity=0.208 Sum_probs=87.1
Q ss_pred cccHHHHHHHHhcC-----cccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCccccc
Q 029781 6 IPSCLTLARLNANG-----VINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGD 77 (188)
Q Consensus 6 ~~sv~~a~~~m~~~-----~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 77 (188)
-.++.+|++.|.++ ++.++||+| +++++ +|.+|++. ...+.++++
T Consensus 171 ~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~---------------------------~~~~~~v~d 223 (473)
T 2zy9_A 171 GMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIV---------------------------ADPRTRVAE 223 (473)
T ss_dssp TCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHH---------------------------SCTTSBGGG
T ss_pred CCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhc---------------------------CCCCCcHHH
Confidence 45899999999986 589999999 88999 99999872 123568999
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 78 im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+|.+ ++.++++++++.++++.|.+++...+||+|++|+++|+||.+|+++...
T Consensus 224 im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 224 IMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp TSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHH
Confidence 9988 8999999999999999999999999999999999999999999998654
No 109
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.40 E-value=1e-13 Score=114.04 Aligned_cols=99 Identities=18% Similarity=0.209 Sum_probs=0.0
Q ss_pred ccccHHHHHHHHhcCcccCCceee----cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQ----LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDF 78 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd----~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 78 (188)
+-.++.+|.++|.+++++++||++ +++|+ +|.+|+. ......+++++
T Consensus 153 P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r---------------------------f~d~~~~V~ev 205 (556)
T 4af0_A 153 PDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ---------------------------FQDAETPIKSV 205 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc---------------------------ccccceEhhhh
Confidence 346889999999999999999998 35788 9999976 12335789999
Q ss_pred cccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 79 m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
|++ ++++++++.++++|.++|.++++..+||+|++++++|+||.+|+.+...
T Consensus 206 MT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 206 MTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ------------------------------------------------------
T ss_pred ccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 999 8999999999999999999999999999999999999999999997654
No 110
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.37 E-value=8.2e-13 Score=100.65 Aligned_cols=53 Identities=17% Similarity=0.046 Sum_probs=49.7
Q ss_pred cccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 77 ~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
.+|.+ .++++.+++++.++..+|...|++++||++ +|+++||||++|+++++.
T Consensus 193 ~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp SCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 36888 899999999999999999999999999998 699999999999999875
No 111
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.35 E-value=2.5e-12 Score=107.19 Aligned_cols=106 Identities=17% Similarity=0.162 Sum_probs=91.5
Q ss_pred cccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcC--CCcEEEEEehHHHhhchhccCccccccccccc-Ccc-c
Q 029781 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD--DWKLVGVVSDYDLLALDSISGSMRKLGFNLYF-GFN-S 150 (188)
Q Consensus 75 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~--~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~-~~~-~ 150 (188)
.++.|.+ ++.++.+++++.++++.|.+++++++||+|+ +++++|+||.+|++.. .....++.++|.+ .+. +
T Consensus 115 ~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---~~~~~~V~~vM~~~~~vtv 189 (511)
T 3usb_A 115 SESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---QDYSIKISDVMTKEQLITA 189 (511)
T ss_dssp SSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---CCSSSBHHHHCCCCCCCCE
T ss_pred ccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---ccCCCcHHHhcccCCCEEE
Confidence 3455666 8899999999999999999999999999998 8899999999999752 2345567888984 444 9
Q ss_pred CCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 151 GNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+++.++.++.++|.+++...+||+| ++.+.|+||.
T Consensus 190 ~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~ 225 (511)
T 3usb_A 190 PVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITI 225 (511)
T ss_dssp ETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEH
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccH
Confidence 9999999999999999999999998 5899999984
No 112
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.33 E-value=4.9e-13 Score=112.09 Aligned_cols=103 Identities=8% Similarity=0.066 Sum_probs=86.7
Q ss_pred ccHHHHHHHHhcCcccCCceee--cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 7 PSCLTLARLNANGVINSVPHLQ--LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 7 ~sv~~a~~~m~~~~~~~~pVvd--~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
+++.+|+++|.+++++++||+| +++++ ||.+||++.... .......++.++|.+
T Consensus 402 ~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~---------------------~~~~~~~~V~~im~~- 459 (527)
T 3pc3_A 402 ATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVS---------------------MNRQQSDPAIKALNK- 459 (527)
T ss_dssp CBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHH---------------------HCCCTTSBGGGGEET-
T ss_pred CcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHh---------------------ccCcCCCcHHHHhcC-
Confidence 6899999999999999999999 78899 999999842110 012335689999998
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC----CcEEEEEehHHHhhchhcc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDD----WKLVGVVSDYDLLALDSIS 134 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~----~~~~Giit~~dl~~~~~~~ 134 (188)
++.++.+++++.+++++|.++++ +||+|++ |+++|+||..|+++++...
T Consensus 460 -~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 460 -RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp -TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred -CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 99999999999999999977664 7999974 8999999999999887643
No 113
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.33 E-value=9.7e-13 Score=109.31 Aligned_cols=107 Identities=13% Similarity=0.150 Sum_probs=85.4
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccc---cCccc
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLY---FGFNS 150 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~---~~~~~ 150 (188)
+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++++++|+||.+|++... ....++.++|. +.+.+
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~---~~~~~v~diM~p~~~~vtv 164 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVT---DLTKSVAAVMTPKERLATV 164 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCC---CTTSBGGGTSEEGGGCCEE
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcc---cCCCcHHHHhcCCCCCEEE
Confidence 45678988 899999999999999999999999999999889999999999997422 24456889998 35559
Q ss_pred CCcchHHHHHHHHhccCceEEEEEeC-CEeeceeec
Q 029781 151 GNAYFARWLLKFVGGINCGFLLTVEG-AMTANIISS 185 (188)
Q Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~vv~~-~~~~giit~ 185 (188)
.++.++.++.++|.+++.+.+||+|+ +.+.|+||.
T Consensus 165 ~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~ 200 (496)
T 4fxs_A 165 KEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITA 200 (496)
T ss_dssp ECC----CGGGTCC---CCCEEEECTTSBCCEEECC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehH
Confidence 99999999999999999999999984 899999985
No 114
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.33 E-value=5.2e-13 Score=111.15 Aligned_cols=102 Identities=24% Similarity=0.283 Sum_probs=5.0
Q ss_pred cccHHHHHHHHhcCcccCCceee-cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ-LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd-~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
-.++.+|+++|.+++++.+||+| +++++ +|.+|++.. .....++.++|++.
T Consensus 111 ~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~--------------------------~~~~~~v~~im~~~ 164 (494)
T 1vrd_A 111 DMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE--------------------------KNLSKKIKDLMTPR 164 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh--------------------------cCCCCcHHHHhCCC
Confidence 35789999999999999999999 78999 999998721 11356899999853
Q ss_pred CCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 83 ~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
.++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++....
T Consensus 165 ~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 165 EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp --------------------------------------------CHHHHTC
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 367899999999999999999999999999999999999999999987643
No 115
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.29 E-value=1.6e-11 Score=102.04 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=94.2
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEc--CCCcEEEEEehHHHhhchhccCccccccccccc-Cc-c
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVID--DDWKLVGVVSDYDLLALDSISGSMRKLGFNLYF-GF-N 149 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd--~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~-~~-~ 149 (188)
.++++|.+ ++.++.+++++.++++.|.+++++.+||+| ++++++|+||.+|++... ....++.++|.+ .+ .
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---~~~~~v~~im~~~~~~~ 165 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS---DYNAPISEHMTSEHLVT 165 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS---CSSSBTTTSCCCSCCCC
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc---cCCCcHHHHcCCCCCEE
Confidence 45789998 899999999999999999999999999999 789999999999998653 245567889985 44 4
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.+++++.+++++|.+++...+||++ ++.+.|++|.
T Consensus 166 v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~ 202 (491)
T 1zfj_A 166 AAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITI 202 (491)
T ss_dssp EETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEH
T ss_pred ECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEH
Confidence 88999999999999999999999998 5899999984
No 116
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.28 E-value=3.3e-11 Score=100.22 Aligned_cols=101 Identities=20% Similarity=0.218 Sum_probs=87.5
Q ss_pred cccHHHHHHHHhcCcccCCceee---cCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccc
Q 029781 6 IPSCLTLARLNANGVINSVPHLQ---LPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMT 80 (188)
Q Consensus 6 ~~sv~~a~~~m~~~~~~~~pVvd---~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (188)
-+++.+++++|.+++++++||+| +++++ +|.+|++.. .....++.++|+
T Consensus 106 ~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~--------------------------~~~~~~v~~im~ 159 (491)
T 1zfj_A 106 EHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI--------------------------SDYNAPISEHMT 159 (491)
T ss_dssp SSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC--------------------------SCSSSBTTTSCC
T ss_pred CCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh--------------------------ccCCCcHHHHcC
Confidence 35799999999999999999997 67888 999998721 123568999998
Q ss_pred cCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhc
Q 029781 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133 (188)
Q Consensus 81 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 133 (188)
+. ++.++++++++.++++.|.+++.+.+||+|++|+++|++|..|+++....
T Consensus 160 ~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 160 SE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp CS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 52 47899999999999999999999999999999999999999999987753
No 117
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.24 E-value=2.7e-12 Score=106.58 Aligned_cols=96 Identities=28% Similarity=0.373 Sum_probs=0.5
Q ss_pred ccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccCCC
Q 029781 7 PSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKED 84 (188)
Q Consensus 7 ~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~ 84 (188)
+++.++.++|.+++++++||+|+++++ +|.+|++. ....++.++|++ +
T Consensus 110 ~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~----------------------------~~~~~v~~im~~--~ 159 (486)
T 2cu0_A 110 ETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAA----------------------------REGKLVKELMTK--E 159 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhcc----------------------------CCCCCHHHHccC--C
Confidence 578899999999999999999988888 99999871 135689999998 8
Q ss_pred eeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 85 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
+.++++++++.++++.|.+++.+.+||+|++|+++|++|.+|+++...
T Consensus 160 ~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 160 VITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -----------------------------------------------C
T ss_pred CeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 999999999999999999999999999999999999999999998765
No 118
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.23 E-value=2.2e-12 Score=107.84 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=56.8
Q ss_pred ccccHHHHHHHHhcCcccCCceeec----CceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccc
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQL----PITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDF 78 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~----~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 78 (188)
.-+++.+|.++|.+++++.+||+|+ ++++ +|.+|+.... ......++.++
T Consensus 123 ~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~------------------------~~~~~~~v~~v 178 (514)
T 1jcn_A 123 PSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA------------------------EKDHTTLLSEV 178 (514)
T ss_dssp C-----------------CEESCC--------CCEECTTTTC--------------------------------------
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh------------------------hccCCCCHHHH
Confidence 3468899999999999999999994 7888 9999987210 01235689999
Q ss_pred cccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchh
Q 029781 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (188)
Q Consensus 79 m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~ 132 (188)
|++..++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|+++...
T Consensus 179 m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 179 MTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp --CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred hCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 985335789999999999999999999999999999999999999999997664
No 119
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.22 E-value=1e-12 Score=109.49 Aligned_cols=106 Identities=14% Similarity=0.014 Sum_probs=1.3
Q ss_pred ccc-cccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCC---CcEEEEEehHHHhhchhccCcccccccccccC--c-
Q 029781 76 GDF-MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD---WKLVGVVSDYDLLALDSISGSMRKLGFNLYFG--F- 148 (188)
Q Consensus 76 ~~i-m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~---~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~--~- 148 (188)
.++ |.+ ++.++.+++++.++++.|.+++++.+||+|++ ++++|+||.+|++.. ......++.++|.+. +
T Consensus 99 ~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~~~~~~~V~diM~~~~~~~ 174 (503)
T 1me8_A 99 FKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--LTQTETKVSDMMTPFSKLV 174 (503)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred cccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--hccccCcHHHHhCCCCCCE
Confidence 344 988 89999999999999999999999999999976 899999999999864 223445678899874 4
Q ss_pred ccCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 NSGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+.+++++.+++++|.+++.+.+||++ ++.+.|+||.
T Consensus 175 tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~ 212 (503)
T 1me8_A 175 TAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFR 212 (503)
T ss_dssp --------------------------------------
T ss_pred EEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEe
Confidence 499999999999999999999999998 5789999985
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.21 E-value=1.2e-12 Score=108.85 Aligned_cols=107 Identities=19% Similarity=0.184 Sum_probs=1.1
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCccccccccccc--Ccc-c
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYF--GFN-S 150 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~--~~~-~ 150 (188)
++.++|.+ ++.++.+++++.++++.|.+++++.+||+|++++++|+||.+|+++.. ....++.++|.+ .+. +
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~---~~~~~v~~im~~~~~~~~v 170 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK---NLSKKIKDLMTPREKLIVA 170 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc---CCCCcHHHHhCCCCCCeEE
Confidence 46788998 899999999999999999999999999999889999999999998632 234567888985 555 9
Q ss_pred CCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 151 GNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+++++.++.++|.+++...+||++ ++.+.|+||.
T Consensus 171 ~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~ 206 (494)
T 1vrd_A 171 PPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITI 206 (494)
T ss_dssp ------------------------------------
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEH
Confidence 9999999999999999999999997 5899999984
No 121
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.21 E-value=6.6e-11 Score=72.50 Aligned_cols=63 Identities=21% Similarity=0.191 Sum_probs=52.1
Q ss_pred eeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---cccccccccccCc
Q 029781 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNLYFGF 148 (188)
Q Consensus 85 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~~~~~ 148 (188)
++++.+++++.+|++.|.+++++++||+| +|+++|++|.+|+++.....+ ...+++++|.+.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~ 67 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCC
Confidence 67999999999999999999999999998 589999999999986443222 2345788887654
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.18 E-value=2.2e-12 Score=107.12 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=3.2
Q ss_pred cccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccc---cCcc
Q 029781 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLY---FGFN 149 (188)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~---~~~~ 149 (188)
.+++++|.+ ++.++.+++++.+++++|.+++++.+||+| +++++|+||.+|+.... ....++.++|. +.+.
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~---~~~~~V~~vMtp~~~~vt 161 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP---NAGDTVAAIMTPKDKLVT 161 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc---ccCCcHHHHhccCCCCEE
Confidence 356788988 899999999999999999999999999999 79999999999996432 23456889998 3455
Q ss_pred cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 150 SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 150 ~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
+.++.++.++.++|.+++...+||+| ++.+.|+||.
T Consensus 162 v~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~ 198 (490)
T 4avf_A 162 AREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTF 198 (490)
T ss_dssp -------------------------------------
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeh
Confidence 99999999999999999999999998 5899999985
No 123
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.12 E-value=2.6e-10 Score=69.40 Aligned_cols=63 Identities=21% Similarity=0.191 Sum_probs=53.0
Q ss_pred eeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccC---cccccccccccCc
Q 029781 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG---SMRKLGFNLYFGF 148 (188)
Q Consensus 85 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~~~~~~~ 148 (188)
+.++.+++++.++++.|.+++++.+||+|+ |+++|++|.+|+++++...+ ...+++++|.+.+
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 67 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCC
Confidence 678999999999999999999999999996 99999999999998764432 2445788887653
No 124
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.06 E-value=4.7e-12 Score=105.83 Aligned_cols=109 Identities=18% Similarity=0.171 Sum_probs=60.1
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcC---CCcEEEEEehHHHhhchhccCccccccccccc--Cc
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD---DWKLVGVVSDYDLLALDSISGSMRKLGFNLYF--GF 148 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~--~~ 148 (188)
++.++|.+ ++.++.+++++.++++.|.+++++.+||+|+ +++++|+||.+|+..... .....++.++|.+ .+
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~-~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE-KDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC-----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh-ccCCCCHHHHhCCCCCC
Confidence 56788988 8999999999999999999999999999997 489999999999986421 1234557888886 55
Q ss_pred c-cCCcchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 149 N-SGNAYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 149 ~-~~~~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
. +.+++++.++.++|.+++...+||++ ++.+.|+||.
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~ 224 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIAR 224 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----C
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEH
Confidence 5 89999999999999999999999997 6899999984
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.06 E-value=1.6e-11 Score=101.06 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=0.0
Q ss_pred ccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcC---CCcEEEEEehHHHhhchhccCcccccccccccCcc-cCCc
Q 029781 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD---DWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFN-SGNA 153 (188)
Q Consensus 78 im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~---~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~-~~~~ 153 (188)
.|.. +|+++.++.++.+++++|.+++++.+||+++ +++++||||.+|+... +...++.++|.+.+. .+..
T Consensus 143 g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~----d~~~~V~evMT~~lvt~~~~ 216 (556)
T 4af0_A 143 GFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ----DAETPIKSVMTTEVVTGSSP 216 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccC--CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc----ccceEhhhhcccceEEecCC
Confidence 3556 7899999999999999999999999999985 5789999999998642 345678999988776 8888
Q ss_pred chHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 154 YFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 154 ~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
.+++++.++|.++++..+||+| ++.+.|+||.
T Consensus 217 ~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~ 249 (556)
T 4af0_A 217 ITLEKANSLLRETKKGKLPIVDSNGHLVSLVAR 249 (556)
T ss_dssp ---------------------------------
T ss_pred CCHHHHHHHHHHccccceeEEccCCcEEEEEEe
Confidence 9999999999999999999997 5799999984
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.99 E-value=4.4e-11 Score=99.32 Aligned_cols=104 Identities=20% Similarity=0.208 Sum_probs=1.4
Q ss_pred ccccccccCCCeeEEcCCCCHHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhhchhccCcccccccccccCcc-cCC
Q 029781 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGSMRKLGFNLYFGFN-SGN 152 (188)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~-~~~ 152 (188)
...+.|.. ++.++.+++++.++++.|.+++++++||+|+ ++++|+|+.+|++. ....++.++|.+.+. +.+
T Consensus 94 ~~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~-----~~~~~v~~im~~~~~~v~~ 165 (486)
T 2cu0_A 94 RAERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA-----REGKLVKELMTKEVITVPE 165 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc-----CCCCCHHHHccCCCeEECC
Confidence 34567887 8999999999999999999999999999997 99999999999986 234567888885554 889
Q ss_pred cchHHHHHHHHhccCceEEEEEe-CCEeeceeec
Q 029781 153 AYFARWLLKFVGGINCGFLLTVE-GAMTANIISS 185 (188)
Q Consensus 153 ~~~~~~v~~~l~~~~~~~~~vv~-~~~~~giit~ 185 (188)
++++.+++++|.+++.+.+||++ ++.+.|++|.
T Consensus 166 ~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~ 199 (486)
T 2cu0_A 166 SIEVEEALKIMIENRIDRLPVVDERGKLVGLITM 199 (486)
T ss_dssp ----------------------------------
T ss_pred cCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEH
Confidence 99999999999999999999998 5789999985
No 127
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.79 E-value=1e-09 Score=67.14 Aligned_cols=62 Identities=11% Similarity=0.083 Sum_probs=48.7
Q ss_pred ccccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
.-+|+.+|+++|.+++++++||+|+|+++ +|++|++++.. +........+++++|++
T Consensus 7 p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~--------------------~~~~~~~~~~V~~iMt~- 65 (70)
T 3ghd_A 7 PKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVV--------------------AKGKNPKEVKVEEIMTK- 65 (70)
T ss_dssp TTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTT--------------------TTTCCGGGCBGGGTCEE-
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHH--------------------hcCCCcccCCHHHhcCC-
Confidence 45789999999999999999999999999 99999974221 11123446789999998
Q ss_pred CCeeEE
Q 029781 83 EDLHAV 88 (188)
Q Consensus 83 ~~~~~v 88 (188)
+++++
T Consensus 66 -~~iTV 70 (70)
T 3ghd_A 66 -NPVKI 70 (70)
T ss_dssp -CTTCC
T ss_pred -CCeEC
Confidence 77653
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.09 E-value=6.6e-07 Score=53.93 Aligned_cols=61 Identities=11% Similarity=0.049 Sum_probs=46.5
Q ss_pred ccccHHHHHHHHhcCcccCCceeecCceE--ecCCcccccccccccchhhhhhhccCCCCCCCCCCCCCCcccccccccC
Q 029781 5 SIPSCLTLARLNANGVINSVPHLQLPITV--ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKK 82 (188)
Q Consensus 5 ~~~sv~~a~~~m~~~~~~~~pVvd~~~l~--vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~ 82 (188)
.-+++.+|+++|.+++++++||+|+|+++ +|.+|+++.... ........+++++|++
T Consensus 7 ~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~--------------------~~~~~~~~~v~~im~~- 65 (70)
T 3fio_A 7 PKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVA--------------------KGKNPKEVKVEEIMTK- 65 (70)
T ss_dssp TTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTT--------------------TTCCGGGCBGGGTCEE-
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHH--------------------cCCCcccCCHHHhcCC-
Confidence 34689999999999999999999988899 999998842210 0112346789999988
Q ss_pred CCeeE
Q 029781 83 EDLHA 87 (188)
Q Consensus 83 ~~~~~ 87 (188)
++.+
T Consensus 66 -~~~~ 69 (70)
T 3fio_A 66 -NPVK 69 (70)
T ss_dssp -CTTC
T ss_pred -CCeE
Confidence 6543
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=80.48 E-value=2.9 Score=25.33 Aligned_cols=31 Identities=16% Similarity=0.233 Sum_probs=24.7
Q ss_pred CCeEEEEcCCCcEEEEEehHHHhhchhccCc
Q 029781 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGS 136 (188)
Q Consensus 106 ~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~ 136 (188)
...+=++|++|.-+|+++..+.++.....+.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~L 43 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRNL 43 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcCC
Confidence 3456688999999999999999987765543
No 130
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=53.97 E-value=10 Score=25.99 Aligned_cols=35 Identities=20% Similarity=0.456 Sum_probs=27.6
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCcEEEEEehHHHhh
Q 029781 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129 (188)
Q Consensus 94 l~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~ 129 (188)
+.+..+.+.+.+.+.+.|.. +++++|+|...|-++
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCCC
Confidence 66677778888877777765 589999999988654
No 131
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=43.21 E-value=21 Score=23.19 Aligned_cols=20 Identities=30% Similarity=0.361 Sum_probs=15.7
Q ss_pred EEEEcCCCcEEEEEehHHHh
Q 029781 109 FPVIDDDWKLVGVVSDYDLL 128 (188)
Q Consensus 109 ~pVvd~~~~~~Giit~~dl~ 128 (188)
.||.+++|+++|+|...-.+
T Consensus 106 ~PV~~~~g~viGvv~vg~~l 125 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYTI 125 (131)
T ss_dssp EEEECTTCCEEEEEEEEEEG
T ss_pred EeEECCCCCEEEEEEEEEEh
Confidence 68988779999999865443
No 132
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=42.36 E-value=21 Score=23.61 Aligned_cols=22 Identities=32% Similarity=0.321 Sum_probs=16.8
Q ss_pred eEEEEcCCCcEEEEEehHHHhh
Q 029781 108 GFPVIDDDWKLVGVVSDYDLLA 129 (188)
Q Consensus 108 ~~pVvd~~~~~~Giit~~dl~~ 129 (188)
..||.+++|+++|+|+..-.+.
T Consensus 110 ~~PV~~~~g~viGvv~vg~~~~ 131 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGLELS 131 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEHH
T ss_pred EEeEEcCCCCEEEEEEEeEEHH
Confidence 3689886799999998765443
No 133
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=35.50 E-value=24 Score=23.63 Aligned_cols=17 Identities=29% Similarity=0.233 Sum_probs=13.7
Q ss_pred CeEEEEcCCCcEEEEEe
Q 029781 107 TGFPVIDDDWKLVGVVS 123 (188)
Q Consensus 107 ~~~pVvd~~~~~~Giit 123 (188)
+..||.|++|+++|++.
T Consensus 109 ~~~Pi~d~~G~~~G~ve 125 (151)
T 2qkp_A 109 TYAAVRDQAGDFQGVLE 125 (151)
T ss_dssp EEEEEECTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 45788887899999884
No 134
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=34.94 E-value=24 Score=25.51 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=17.6
Q ss_pred CCCeEEEEcCCCcEEEEEehH
Q 029781 105 RITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 105 ~~~~~pVvd~~~~~~Giit~~ 125 (188)
+-+.=|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 556779999889999999864
No 135
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=34.49 E-value=21 Score=25.90 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=18.5
Q ss_pred hcCCCeEEEEcCCCcEEEEEeh
Q 029781 103 EKRITGFPVIDDDWKLVGVVSD 124 (188)
Q Consensus 103 ~~~~~~~pVvd~~~~~~Giit~ 124 (188)
..+-+.=|++|.+|+++||++.
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECC
T ss_pred CCCCchHHeeCCCCeEEEEEee
Confidence 3566778999988999999986
No 136
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=31.36 E-value=25 Score=24.83 Aligned_cols=22 Identities=27% Similarity=0.451 Sum_probs=18.3
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.+-+.=|+++.+|+++|+++..
T Consensus 155 ~GdSGGPlv~~~g~lvGI~s~g 176 (210)
T 2as9_A 155 PGNSGSPVLNSNNEVIGVVYGG 176 (210)
T ss_dssp TTCTTCEEECTTSCEEEEECCS
T ss_pred CCCccCcEECCCCeEEEEEecc
Confidence 4667789998779999999974
No 137
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=30.62 E-value=32 Score=25.31 Aligned_cols=21 Identities=14% Similarity=0.320 Sum_probs=18.0
Q ss_pred cCCCeEEEEcCCCcEEEEEeh
Q 029781 104 KRITGFPVIDDDWKLVGVVSD 124 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~ 124 (188)
.+-+.=|++|.+|+++||.+.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 466778999988999999886
No 138
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=30.20 E-value=32 Score=24.78 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=18.4
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.+-+.=|++|.+|+++||++..
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGA 201 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEee
Confidence 4677889998889999998764
No 139
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=29.36 E-value=37 Score=23.26 Aligned_cols=23 Identities=22% Similarity=0.424 Sum_probs=19.3
Q ss_pred HhcCCCeEEEEcCCCcEEEEEeh
Q 029781 102 VEKRITGFPVIDDDWKLVGVVSD 124 (188)
Q Consensus 102 ~~~~~~~~pVvd~~~~~~Giit~ 124 (188)
.+.+-+.-|++|.+|+++|+.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 34677889999999999999874
No 140
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=29.10 E-value=31 Score=24.93 Aligned_cols=27 Identities=30% Similarity=0.327 Sum_probs=19.9
Q ss_pred hcCCCeEEEEcCCCcEEEEEehHHHhh
Q 029781 103 EKRITGFPVIDDDWKLVGVVSDYDLLA 129 (188)
Q Consensus 103 ~~~~~~~pVvd~~~~~~Giit~~dl~~ 129 (188)
+.+-+.-||+|.+|+++||-+..+=..
T Consensus 123 ~pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 123 ACGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCCccCCCCCcEEEEEeccCCcc
Confidence 467888999999999999999988664
No 141
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=28.56 E-value=37 Score=23.57 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=18.3
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.+-+.=|+++.+|+++||++..
T Consensus 151 ~GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCeEECcCCEEEEEEecc
Confidence 4667789998779999999975
No 142
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=26.20 E-value=43 Score=23.15 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=17.7
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.+-+.=|+++.+|+++|+++..
T Consensus 154 ~GdSGGPl~~~~g~lvGI~s~g 175 (204)
T 2vid_A 154 SGNSGSPVLNSNNELVGIHFAS 175 (204)
T ss_dssp GGGTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCcEECCCCeEEEEEecC
Confidence 3556679998788999999975
No 143
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=25.34 E-value=45 Score=24.17 Aligned_cols=22 Identities=18% Similarity=0.202 Sum_probs=18.0
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.|-+.=|+++.+|+++||++..
T Consensus 183 ~GdSGGPlv~~~g~lvGI~s~g 204 (246)
T 1qtf_A 183 VGNSGSGIFNLKGELIGIHSGK 204 (246)
T ss_dssp GGGTTCEEECTTCCEEEEEEEE
T ss_pred CCCchhheECCCCEEEEEEecc
Confidence 4556789998789999999975
No 144
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=23.48 E-value=54 Score=15.15 Aligned_cols=19 Identities=21% Similarity=0.402 Sum_probs=13.6
Q ss_pred ccHHHHHHHHhcCcccCCc
Q 029781 7 PSCLTLARLNANGVINSVP 25 (188)
Q Consensus 7 ~sv~~a~~~m~~~~~~~~p 25 (188)
+.+.||+..+-.+|+..+|
T Consensus 8 ~~L~eaL~~vC~~GFn~~~ 26 (26)
T 2wfu_B 8 PALMDMLRVACPNGFNSXX 26 (26)
T ss_dssp HHHHHHHHHHCSSCCCC--
T ss_pred HHHHHHHHHHHhccCCCCC
Confidence 4577888888888888776
No 145
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=21.38 E-value=48 Score=24.14 Aligned_cols=22 Identities=14% Similarity=0.298 Sum_probs=18.1
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.+-+.=|++|.+|+++||++..
T Consensus 180 ~G~SGGPLv~~~G~vvGI~s~~ 201 (239)
T 1l1j_A 180 PGNSGGPLLNIHGEVIGINTAI 201 (239)
T ss_dssp TTTTTSEEECSSSEEEEEECCC
T ss_pred CCCccHHhccCCCeEEEEEeee
Confidence 4566789998889999999974
No 146
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=21.24 E-value=56 Score=23.49 Aligned_cols=22 Identities=23% Similarity=0.323 Sum_probs=17.8
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.|-+.=|+++.+|+++||++..
T Consensus 192 ~GdSGGPl~~~~g~lvGI~s~g 213 (242)
T 1agj_A 192 PGNSGSGIFNSNGELVGIHSSK 213 (242)
T ss_dssp GGGTTCEEECTTSEEEEEEEEE
T ss_pred CCCCchHhcccCCEEEEEEecc
Confidence 4556679998779999999974
No 147
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=20.52 E-value=1.2e+02 Score=16.78 Aligned_cols=26 Identities=12% Similarity=0.070 Sum_probs=22.1
Q ss_pred CCCCHHHHHHHHHhcCCCeEEEEcCC
Q 029781 90 TTTTVDEALERLVEKRITGFPVIDDD 115 (188)
Q Consensus 90 ~~~~l~~~~~~m~~~~~~~~pVvd~~ 115 (188)
+-++++||+..|.-.+...+.-.|.+
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~ 36 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAE 36 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSS
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCC
Confidence 45789999999999999888888765
No 148
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=20.28 E-value=58 Score=24.91 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=17.3
Q ss_pred CCCeEEEEcCCCcEEEEEehH
Q 029781 105 RITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 105 ~~~~~pVvd~~~~~~Giit~~ 125 (188)
+-+.=|++|.+|+++||++..
T Consensus 170 G~SGGPlv~~~G~vvGI~s~~ 190 (332)
T 3num_A 170 GNAGGPLVNLDGEVIGINTLK 190 (332)
T ss_dssp TTTTSEEEETTSCEEEEEEEE
T ss_pred CCcHHHhhCCCCcEEEEEeeE
Confidence 556779998889999999863
No 149
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=20.12 E-value=64 Score=24.46 Aligned_cols=22 Identities=14% Similarity=0.146 Sum_probs=18.0
Q ss_pred cCCCeEEEEcCCCcEEEEEehH
Q 029781 104 KRITGFPVIDDDWKLVGVVSDY 125 (188)
Q Consensus 104 ~~~~~~pVvd~~~~~~Giit~~ 125 (188)
.+-+.-|++|.+|+++|+.+..
T Consensus 162 ~G~SGGPl~~~~G~vvGI~s~~ 183 (318)
T 1te0_A 162 HGNSGGALVNSLGELMGINTLS 183 (318)
T ss_dssp TTTTTSEEECTTCCEEEEEECC
T ss_pred CCCCcCceECCCCeEEEEEeee
Confidence 4566789999889999999863
Done!