Your job contains 1 sequence.
>029783
MLKQVVGKVLNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSRP
YTYKKEKKSKNTTKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS
KDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNG
IDVKIYLD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029783
(188 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716736 - symbol:AT1G08845 species:3702 "Ar... 666 2.0e-65 1
TAIR|locus:2077016 - symbol:AT3G22450 species:3702 "Arabi... 284 5.9e-25 1
TAIR|locus:2087535 - symbol:AT3G20230 species:3702 "Arabi... 264 7.8e-23 1
TAIR|locus:2180310 - symbol:AT5G27820 species:3702 "Arabi... 135 3.6e-09 1
TIGR_CMR|CBU_0254 - symbol:CBU_0254 "ribosomal protein L1... 115 4.8e-07 1
TIGR_CMR|SPO_0501 - symbol:SPO_0501 "ribosomal protein L1... 106 4.3e-06 1
TIGR_CMR|GSU_2841 - symbol:GSU_2841 "ribosomal protein L1... 95 8.7e-05 1
UNIPROTKB|Q9KP00 - symbol:rplR "50S ribosomal protein L18... 94 0.00011 1
TIGR_CMR|SO_0247 - symbol:SO_0247 "ribosomal protein L18"... 94 0.00011 1
TIGR_CMR|VC_2580 - symbol:VC_2580 "ribosomal protein L18"... 94 0.00011 1
TIGR_CMR|CPS_0617 - symbol:CPS_0617 "ribosomal protein L1... 93 0.00015 1
TIGR_CMR|CHY_2293 - symbol:CHY_2293 "ribosomal protein L1... 92 0.00020 1
UNIPROTKB|J9P2G0 - symbol:MRPL18 "Uncharacterized protein... 103 0.00051 1
>TAIR|locus:1005716736 [details] [associations]
symbol:AT1G08845 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR005484
Pfam:PF00861 EMBL:CP002684 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 IPI:IPI00938904 RefSeq:NP_001154322.1
UniGene:At.47036 ProteinModelPortal:F4HXR7 SMR:F4HXR7 PRIDE:F4HXR7
EnsemblPlants:AT1G08845.2 GeneID:837407 KEGG:ath:AT1G08845
OMA:SFFGVED Uniprot:F4HXR7
Length = 234
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 132/189 (69%), Positives = 151/189 (79%)
Query: 1 MLKQVVGKV-LNNWLVANGGEKAIRPFLYVPTSSLHQGQVLNAPRSFFGVEDFLDDDNSR 59
MLKQVV K + + + +RPF+ + H G+ + APRSFFGVED++DDD SR
Sbjct: 46 MLKQVVAKYSIGKAAIYGSNREKLRPFMCQTSCRFHNGRTVFAPRSFFGVEDYVDDDTSR 105
Query: 60 PYXXXXXXXXXXXXXHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTN 119
PY H+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVT +QVAVAGTN
Sbjct: 106 PYTYQKEKKSKNPDKHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCRQVAVAGTN 165
Query: 120 SKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDN 179
SKD+KAVLRSR DIPAC++IGRIL+ERA+EADVYTASYTPR++DKFEGKIRAVVQSLIDN
Sbjct: 166 SKDVKAVLRSRCDIPACMSIGRILSERAKEADVYTASYTPRDQDKFEGKIRAVVQSLIDN 225
Query: 180 GIDVKIYLD 188
GIDVKIYLD
Sbjct: 226 GIDVKIYLD 234
>TAIR|locus:2077016 [details] [associations]
symbol:AT3G22450 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR005484
Pfam:PF00861 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AB022215 EMBL:AP000731
EMBL:AY924773 EMBL:DQ132687 EMBL:DQ132688 IPI:IPI00534228
RefSeq:NP_188884.1 UniGene:At.64533 ProteinModelPortal:Q9LJA1
SMR:Q9LJA1 EnsemblPlants:AT3G22450.1 GeneID:821816
KEGG:ath:AT3G22450 TAIR:At3g22450 eggNOG:NOG314890
HOGENOM:HOG000005707 InParanoid:Q9LJA1 OMA:ACVIHRV PhylomeDB:Q9LJA1
ProtClustDB:CLSN2684329 Genevestigator:Q9LJA1 Uniprot:Q9LJA1
Length = 311
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 56/111 (50%), Positives = 79/111 (71%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
+F Q T + PF LD++ISK V A + HRVTSK V VA + SKD+K L SR ++ AC
Sbjct: 186 TFNQLTAPFHYPFCLDIYISKESVRACVIHRVTSKVVTVAHSISKDMKFDLGSRRNVAAC 245
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYL 187
A+G +LA+R+ E D++ YTPR+ DK EGK++ V+Q+LIDNG++VK+ L
Sbjct: 246 AAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQVVLQALIDNGVNVKVKL 296
>TAIR|locus:2087535 [details] [associations]
symbol:AT3G20230 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR005484
Pfam:PF00861 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AP000383 EMBL:AY086535
EMBL:BT000934 EMBL:AK317176 IPI:IPI00522889 RefSeq:NP_566655.1
UniGene:At.26916 UniGene:At.38271 ProteinModelPortal:Q9LJX6
SMR:Q9LJX6 STRING:Q9LJX6 PaxDb:Q9LJX6 PRIDE:Q9LJX6
EnsemblPlants:AT3G20230.1 GeneID:821567 KEGG:ath:AT3G20230
TAIR:At3g20230 eggNOG:NOG290803 HOGENOM:HOG000239373
InParanoid:Q9LJX6 OMA:TDMYMRP PhylomeDB:Q9LJX6
ProtClustDB:CLSN2688588 ArrayExpress:Q9LJX6 Genevestigator:Q9LJX6
Uniprot:Q9LJX6
Length = 187
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 50/105 (47%), Positives = 75/105 (71%)
Query: 77 SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPAC 136
S+KQRT YM PF L+VF S++F+ A + HR TSK ++VA TN++DI+ + S D AC
Sbjct: 79 SWKQRTDMYMRPFLLNVFFSRKFIHAKVMHRPTSKVISVATTNARDIRTNIPSLVDNEAC 138
Query: 137 LAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
IG+++AER+ EADVY SY PR+ ++ EGK+ V+ ++ ++GI
Sbjct: 139 RLIGKLIAERSMEADVYAVSYEPRKGERIEGKLGIVIDTIKEHGI 183
>TAIR|locus:2180310 [details] [associations]
symbol:AT5G27820 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] InterPro:IPR005484 Pfam:PF00861
EMBL:CP002688 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AY085957 EMBL:BT024558 IPI:IPI00535527 RefSeq:NP_198134.1
UniGene:At.30784 HSSP:P09415 ProteinModelPortal:Q8LDK5 SMR:Q8LDK5
STRING:Q8LDK5 PRIDE:Q8LDK5 EnsemblPlants:AT5G27820.1 GeneID:832844
KEGG:ath:AT5G27820 TAIR:At5g27820 HOGENOM:HOG000248743
InParanoid:Q8LDK5 OMA:KMHFTNK PhylomeDB:Q8LDK5
ProtClustDB:CLSN2687140 Genevestigator:Q8LDK5 Uniprot:Q8LDK5
Length = 114
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 26/101 (25%), Positives = 52/101 (51%)
Query: 81 RTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIG 140
R Y++P+ L + + +FV A + H T+ A + K ++ + D+ A IG
Sbjct: 11 RLFDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITRDVAAASKIG 70
Query: 141 RILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+IL ER D+ + ++ ++ GK++AV+ S+ + G+
Sbjct: 71 KILGERLLMKDIPAVTIQMKKEQRYHGKVKAVIDSVREAGV 111
>TIGR_CMR|CBU_0254 [details] [associations]
symbol:CBU_0254 "ribosomal protein L18" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR004389 InterPro:IPR005484
Pfam:PF00861 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0256 HOGENOM:HOG000248742 KO:K02881 OMA:GNKYHGR
TIGRFAMs:TIGR00060 ProtClustDB:PRK05593 HAMAP:MF_01337_B
RefSeq:NP_819298.1 ProteinModelPortal:Q83ER0 SMR:Q83ER0
GeneID:1208135 KEGG:cbu:CBU_0254 PATRIC:17929201
BioCyc:CBUR227377:GJ7S-260-MONOMER Uniprot:Q83ER0
Length = 117
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 27/92 (29%), Positives = 53/92 (57%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + A L SK + A T K++++ ++ +I A AIG+++A+RA++A
Sbjct: 26 LCVHRSLNHIYAQLISPRDSKVLVCASTLEKEVRSQIKHGGNIQAATAIGKLIAQRAKKA 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGID 182
V ++ R K+ G++RA+ +++ + GI+
Sbjct: 86 GVTKVAFD-RSGYKYHGRVRALAEAVREGGIE 116
>TIGR_CMR|SPO_0501 [details] [associations]
symbol:SPO_0501 "ribosomal protein L18" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR004389
InterPro:IPR005484 Pfam:PF00861 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0256 HOGENOM:HOG000248742 KO:K02881
TIGRFAMs:TIGR00060 ProtClustDB:PRK05593 HAMAP:MF_01337_B
OMA:FRFHGRV RefSeq:YP_165763.1 ProteinModelPortal:Q5LW42
GeneID:3196026 KEGG:sil:SPO0501 PATRIC:23374263 Uniprot:Q5LW42
Length = 119
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V S + +SA L V +A A T KD+ V ++++ A +G +AERA++A
Sbjct: 30 LSVHRSNKNISAQLIDDVRGVTLAAASTMEKDLGVV--GKNNVEAAKKVGAAIAERAKKA 87
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGIDV 183
V A Y R F GK++A+ + + G+ +
Sbjct: 88 GVEEA-YFDRGGFLFHGKVKALADAAREGGLKI 119
>TIGR_CMR|GSU_2841 [details] [associations]
symbol:GSU_2841 "ribosomal protein L18" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR004389
InterPro:IPR005484 Pfam:PF00861 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0256 HOGENOM:HOG000248742 KO:K02881 OMA:GNKYHGR
TIGRFAMs:TIGR00060 ProtClustDB:PRK05593 HAMAP:MF_01337_B
RefSeq:NP_953884.2 ProteinModelPortal:Q749A3 SMR:Q749A3
GeneID:2686815 KEGG:gsu:GSU2841 PATRIC:22028529
BioCyc:GSUL243231:GH27-2807-MONOMER Uniprot:Q749A3
Length = 122
Score = 95 (38.5 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L+VF S + + A + T + A T K+ L ++ A +G ++A+RA E
Sbjct: 31 LNVFKSAQHIYAQIIDDTTGTTLVSASTVQKEASESLNHCGNVEAAKRVGALIAKRALEK 90
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
++ T + R + G+I+A+ S +NG+
Sbjct: 91 NIATVVFD-RNGFLYHGRIKALADSARENGL 120
>UNIPROTKB|Q9KP00 [details] [associations]
symbol:rplR "50S ribosomal protein L18" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR004389 InterPro:IPR005484
Pfam:PF00861 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 eggNOG:COG0256 KO:K02881
OMA:GNKYHGR TIGRFAMs:TIGR00060 ProtClustDB:PRK05593
HAMAP:MF_01337_B PIR:F82057 RefSeq:NP_232208.1
ProteinModelPortal:Q9KP00 SMR:Q9KP00 PRIDE:Q9KP00 DNASU:2615597
GeneID:2615597 KEGG:vch:VC2580 PATRIC:20084186 Uniprot:Q9KP00
Length = 117
Score = 94 (38.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 80 QRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAI 139
+R +A + L V + R V A + S+ +A A T K I+ ++ +I A A+
Sbjct: 15 RRKIAELGATRLVVHRTPRHVYAQVIAANGSEVIAAASTVEKAIREQVKYTGNIDAAKAV 74
Query: 140 GRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
G+ +AERA E V ++ R ++ G++ A+ S + G+
Sbjct: 75 GKAVAERALEKGVTVVAFD-RSGFQYHGRVAALADSAREAGL 115
>TIGR_CMR|SO_0247 [details] [associations]
symbol:SO_0247 "ribosomal protein L18" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR004389 InterPro:IPR005484 Pfam:PF00861 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0256 HOGENOM:HOG000248742 KO:K02881
TIGRFAMs:TIGR00060 ProtClustDB:PRK05593 HAMAP:MF_01337_B
RefSeq:NP_715887.1 ProteinModelPortal:Q8EK53 SMR:Q8EK53
GeneID:1168130 KEGG:son:SO_0247 PATRIC:23520187 OMA:GRQTRAK
Uniprot:Q8EK53
Length = 116
Score = 94 (38.1 bits), Expect = 0.00011, P = 0.00011
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 113 VAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAV 172
VA A T K +K L+S ++ A A+G+ +AERA E V ++ R K+ G++ A+
Sbjct: 47 VAAASTVEKAVKEQLKSTGNVDAAKAVGKFVAERAIEKGVTNVAFD-RSGFKYHGRVAAL 105
Query: 173 VQSLIDNGI 181
+ + G+
Sbjct: 106 ADAAREAGL 114
>TIGR_CMR|VC_2580 [details] [associations]
symbol:VC_2580 "ribosomal protein L18" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR004389 InterPro:IPR005484 Pfam:PF00861 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0256 KO:K02881 OMA:GNKYHGR
TIGRFAMs:TIGR00060 ProtClustDB:PRK05593 HAMAP:MF_01337_B PIR:F82057
RefSeq:NP_232208.1 ProteinModelPortal:Q9KP00 SMR:Q9KP00
PRIDE:Q9KP00 DNASU:2615597 GeneID:2615597 KEGG:vch:VC2580
PATRIC:20084186 Uniprot:Q9KP00
Length = 117
Score = 94 (38.1 bits), Expect = 0.00011, P = 0.00011
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 80 QRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAI 139
+R +A + L V + R V A + S+ +A A T K I+ ++ +I A A+
Sbjct: 15 RRKIAELGATRLVVHRTPRHVYAQVIAANGSEVIAAASTVEKAIREQVKYTGNIDAAKAV 74
Query: 140 GRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
G+ +AERA E V ++ R ++ G++ A+ S + G+
Sbjct: 75 GKAVAERALEKGVTVVAFD-RSGFQYHGRVAALADSAREAGL 115
>TIGR_CMR|CPS_0617 [details] [associations]
symbol:CPS_0617 "ribosomal protein L18" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR004389 InterPro:IPR005484 Pfam:PF00861 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0256 HOGENOM:HOG000248742 KO:K02881
TIGRFAMs:TIGR00060 HAMAP:MF_01337_B RefSeq:YP_267367.1
ProteinModelPortal:Q488Z7 SMR:Q488Z7 STRING:Q488Z7 GeneID:3520558
KEGG:cps:CPS_0617 PATRIC:21464561 OMA:FRFHGRV
BioCyc:CPSY167879:GI48-704-MONOMER Uniprot:Q488Z7
Length = 117
Score = 93 (37.8 bits), Expect = 0.00015, P = 0.00015
Identities = 22/91 (24%), Positives = 47/91 (51%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L +F + R + A L S+ +A A T K++ A + ++ A A+G+ +AERA
Sbjct: 26 LVIFRTPRHIYAQLIAPTGSEVIASASTLDKEVSAQIEKTGNVAAATAVGKAIAERAVAK 85
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ ++ R + G+++A+ ++ + G+
Sbjct: 86 GITKIAFD-RSGFLYHGRVKALAEAAREAGL 115
>TIGR_CMR|CHY_2293 [details] [associations]
symbol:CHY_2293 "ribosomal protein L18" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR004389 InterPro:IPR005484 Pfam:PF00861
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0256 HOGENOM:HOG000248742
KO:K02881 OMA:GNKYHGR TIGRFAMs:TIGR00060 ProtClustDB:PRK05593
HAMAP:MF_01337_B RefSeq:YP_361102.1 ProteinModelPortal:Q3A9T2
SMR:Q3A9T2 STRING:Q3A9T2 GeneID:3727753 KEGG:chy:CHY_2293
PATRIC:21277657 BioCyc:CHYD246194:GJCN-2292-MONOMER Uniprot:Q3A9T2
Length = 122
Score = 92 (37.4 bits), Expect = 0.00020, P = 0.00020
Identities = 22/107 (20%), Positives = 54/107 (50%)
Query: 75 HISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIP 134
H+ +++ E L+V+ S + + A + V+ + + A T +++ + +I
Sbjct: 15 HLRVRKKIHGTPERPRLNVYRSLKHIYAQIIDDVSGRTLVAASTLDPELRGKIGYGGNIE 74
Query: 135 ACLAIGRILAERAREADVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
A A+GR++AERA+ + + R + G+++A+ ++ + G+
Sbjct: 75 AAKAVGRLIAERAKAKGIEKVVFD-RGGYLYHGRVKALAEAAREGGL 120
>UNIPROTKB|J9P2G0 [details] [associations]
symbol:MRPL18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005484
Pfam:PF00861 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 CTD:29074
GeneTree:ENSGT00390000006394 OMA:KERGWGT EMBL:AAEX03000318
RefSeq:XP_003432596.1 Ensembl:ENSCAFT00000046348 GeneID:476260
KEGG:cfa:476260 Uniprot:J9P2G0
Length = 194
Score = 103 (41.3 bits), Expect = 0.00051, P = 0.00051
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 91 LDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLRSRSDIPACLAIGRILAERAREA 150
L V ++ V A + HR K V A T IK L S ++ AC +IGR+LAER EA
Sbjct: 95 LRVIKTQHHVEALVEHR-NGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAERCLEA 153
Query: 151 DVYTASYTPRERDKFEGKIRAVVQSLIDNGI 181
+ Y P + ++ + ++ + G+
Sbjct: 154 GINFMVYQPTPWEAASDSMKRLQNAMTEGGV 184
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 188 175 0.00078 109 3 11 22 0.38 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 582 (62 KB)
Total size of DFA: 135 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.85u 0.13s 13.98t Elapsed: 00:00:01
Total cpu time: 13.85u 0.13s 13.98t Elapsed: 00:00:01
Start: Tue May 21 00:17:55 2013 End: Tue May 21 00:17:56 2013