Query 029788
Match_columns 188
No_of_seqs 179 out of 1165
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 05:18:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029788.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029788hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pym_A GAPDH 3, glyceraldehyde 100.0 3.2E-71 1.1E-75 472.7 21.7 183 4-188 2-184 (332)
2 3v1y_O PP38, glyceraldehyde-3- 100.0 1.5E-71 5.2E-76 475.6 19.3 186 1-187 1-187 (337)
3 3lvf_P GAPDH 1, glyceraldehyde 100.0 2.3E-70 7.7E-75 468.1 21.0 183 3-188 4-187 (338)
4 3doc_A Glyceraldehyde 3-phosph 100.0 4.4E-70 1.5E-74 466.2 19.9 184 2-188 1-187 (335)
5 4dib_A GAPDH, glyceraldehyde 3 100.0 1.2E-69 4E-74 464.4 19.1 183 3-188 4-188 (345)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 2.9E-69 9.8E-74 462.9 21.1 183 3-188 7-190 (346)
7 3ids_C GAPDH, glyceraldehyde-3 100.0 1.1E-69 3.8E-74 466.6 18.1 185 3-188 2-201 (359)
8 2b4r_O Glyceraldehyde-3-phosph 100.0 1.4E-66 4.7E-71 447.1 18.8 186 1-188 9-195 (345)
9 3hja_A GAPDH, glyceraldehyde-3 100.0 5.2E-67 1.8E-71 449.6 16.2 182 3-188 21-208 (356)
10 1obf_O Glyceraldehyde 3-phosph 100.0 1.5E-65 5.1E-70 439.7 20.6 182 4-188 2-188 (335)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 1.3E-65 4.3E-70 441.0 17.0 183 3-188 2-186 (342)
12 2g82_O GAPDH, glyceraldehyde-3 100.0 2.2E-59 7.5E-64 402.0 19.0 180 4-187 1-182 (331)
13 2d2i_A Glyceraldehyde 3-phosph 100.0 8.3E-59 2.8E-63 403.9 19.6 183 2-187 1-188 (380)
14 3b1j_A Glyceraldehyde 3-phosph 100.0 1.2E-57 4.2E-62 392.4 21.5 183 2-187 1-188 (339)
15 1rm4_O Glyceraldehyde 3-phosph 100.0 7.3E-58 2.5E-62 393.3 19.9 183 4-188 2-187 (337)
16 3cps_A Glyceraldehyde 3-phosph 100.0 7.5E-58 2.5E-62 395.3 18.6 185 2-188 16-202 (354)
17 3cmc_O GAPDH, glyceraldehyde-3 100.0 3.8E-57 1.3E-61 388.7 19.4 181 4-187 2-184 (334)
18 3e5r_O PP38, glyceraldehyde-3- 100.0 1.7E-56 5.9E-61 385.2 19.8 187 1-187 1-187 (337)
19 1hdg_O Holo-D-glyceraldehyde-3 100.0 1.9E-56 6.5E-61 384.1 18.3 181 4-187 1-184 (332)
20 1u8f_O GAPDH, glyceraldehyde-3 100.0 2.4E-56 8.4E-61 384.1 19.0 185 1-187 1-185 (335)
21 1gad_O D-glyceraldehyde-3-phos 100.0 8.4E-56 2.9E-60 379.9 18.7 180 4-187 2-182 (330)
22 2x5j_O E4PDH, D-erythrose-4-ph 100.0 1.2E-55 4.2E-60 380.1 18.4 183 2-187 1-188 (339)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 3.1E-46 1.1E-50 322.1 7.8 167 1-186 1-176 (343)
24 1cf2_P Protein (glyceraldehyde 100.0 5E-37 1.7E-41 264.1 5.3 164 4-185 2-171 (337)
25 2r00_A Aspartate-semialdehyde 100.0 1.7E-34 5.9E-39 248.1 16.2 154 1-187 1-164 (336)
26 2yv3_A Aspartate-semialdehyde 100.0 6.4E-34 2.2E-38 244.2 15.5 149 4-186 1-157 (331)
27 2hjs_A USG-1 protein homolog; 100.0 9.4E-34 3.2E-38 243.9 13.4 155 2-187 5-166 (340)
28 2czc_A Glyceraldehyde-3-phosph 100.0 4.1E-34 1.4E-38 245.4 7.1 166 2-187 1-172 (334)
29 1b7g_O Protein (glyceraldehyde 100.0 7.1E-34 2.4E-38 244.7 8.2 166 4-184 2-169 (340)
30 1t4b_A Aspartate-semialdehyde 100.0 5.4E-34 1.9E-38 247.7 3.4 156 4-187 2-168 (367)
31 2ep5_A 350AA long hypothetical 100.0 4.4E-33 1.5E-37 240.5 6.8 167 2-188 3-185 (350)
32 1ys4_A Aspartate-semialdehyde 100.0 4.7E-32 1.6E-36 234.2 8.1 168 2-188 7-191 (354)
33 1xyg_A Putative N-acetyl-gamma 100.0 4.8E-31 1.7E-35 228.5 10.1 159 1-188 14-199 (359)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 7.7E-31 2.6E-35 226.1 10.8 157 1-187 1-184 (345)
35 3pwk_A Aspartate-semialdehyde 100.0 1E-29 3.6E-34 220.5 15.8 152 2-186 1-160 (366)
36 3tz6_A Aspartate-semialdehyde 100.0 1.9E-29 6.5E-34 217.3 15.8 150 4-186 2-161 (344)
37 3pzr_A Aspartate-semialdehyde 100.0 1.6E-30 5.5E-35 225.9 5.4 153 4-186 1-166 (370)
38 3uw3_A Aspartate-semialdehyde 100.0 3.6E-30 1.2E-34 224.1 4.4 154 3-186 4-170 (377)
39 4dpk_A Malonyl-COA/succinyl-CO 100.0 1.3E-29 4.5E-34 219.5 6.4 167 3-188 7-187 (359)
40 4dpl_A Malonyl-COA/succinyl-CO 100.0 1.3E-29 4.5E-34 219.5 6.4 167 3-188 7-187 (359)
41 3hsk_A Aspartate-semialdehyde 100.0 9.2E-29 3.2E-33 215.6 9.3 167 1-187 17-206 (381)
42 2nqt_A N-acetyl-gamma-glutamyl 99.9 1.1E-26 3.9E-31 200.6 9.6 159 1-186 7-191 (352)
43 3dr3_A N-acetyl-gamma-glutamyl 99.9 4.4E-26 1.5E-30 195.9 5.0 162 4-187 5-193 (337)
44 1vkn_A N-acetyl-gamma-glutamyl 99.9 7.2E-24 2.5E-28 182.9 4.3 154 3-187 13-192 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.9 1.3E-08 4.4E-13 86.2 10.6 154 1-184 2-163 (312)
46 1f06_A MESO-diaminopimelate D- 98.5 2.7E-07 9.1E-12 78.0 7.0 91 1-127 1-91 (320)
47 3bio_A Oxidoreductase, GFO/IDH 98.4 8.7E-07 3E-11 74.3 8.1 91 1-126 7-97 (304)
48 3qy9_A DHPR, dihydrodipicolina 98.2 2E-06 6.9E-11 70.3 5.9 36 1-37 1-36 (243)
49 3e18_A Oxidoreductase; dehydro 98.1 6E-06 2.1E-10 70.4 8.0 95 1-126 3-97 (359)
50 3gdo_A Uncharacterized oxidore 98.1 8E-06 2.7E-10 69.6 8.3 94 1-126 3-97 (358)
51 3ing_A Homoserine dehydrogenas 98.1 6E-06 2.1E-10 70.2 7.3 37 1-37 2-44 (325)
52 2ejw_A HDH, homoserine dehydro 98.1 1.3E-05 4.3E-10 68.4 9.2 88 1-125 1-97 (332)
53 4hkt_A Inositol 2-dehydrogenas 98.1 7.2E-06 2.5E-10 68.8 6.9 93 3-126 3-95 (331)
54 3db2_A Putative NADPH-dependen 98.1 8.7E-06 3E-10 69.0 7.4 95 2-126 4-98 (354)
55 4f3y_A DHPR, dihydrodipicolina 98.0 5.4E-06 1.8E-10 68.8 5.9 97 1-123 5-102 (272)
56 3ezy_A Dehydrogenase; structur 98.0 6.6E-06 2.3E-10 69.5 6.5 96 2-126 1-96 (344)
57 3ec7_A Putative dehydrogenase; 98.0 1.3E-05 4.5E-10 68.2 8.3 98 1-126 21-119 (357)
58 3euw_A MYO-inositol dehydrogen 98.0 2.2E-05 7.5E-10 66.2 8.8 94 3-126 4-97 (344)
59 3kux_A Putative oxidoreductase 98.0 2.2E-05 7.5E-10 66.5 8.8 94 1-126 4-99 (352)
60 1dih_A Dihydrodipicolinate red 98.0 7.3E-06 2.5E-10 67.9 5.6 101 1-126 3-104 (273)
61 3e9m_A Oxidoreductase, GFO/IDH 98.0 1.1E-05 3.7E-10 67.9 6.6 97 1-126 3-99 (330)
62 3fhl_A Putative oxidoreductase 98.0 1.4E-05 4.7E-10 68.1 7.2 94 1-126 3-97 (362)
63 3uuw_A Putative oxidoreductase 98.0 1.2E-05 4.2E-10 66.7 6.5 95 1-127 4-99 (308)
64 3evn_A Oxidoreductase, GFO/IDH 97.9 1.3E-05 4.5E-10 67.3 6.5 97 1-126 3-99 (329)
65 3e82_A Putative oxidoreductase 97.9 2.8E-05 9.7E-10 66.3 8.3 92 3-126 7-99 (364)
66 3ijp_A DHPR, dihydrodipicolina 97.9 1.8E-06 6E-11 72.4 0.6 97 2-123 20-117 (288)
67 3i23_A Oxidoreductase, GFO/IDH 97.9 3.1E-05 1.1E-09 65.6 8.3 96 2-126 1-97 (349)
68 3c8m_A Homoserine dehydrogenas 97.9 9.4E-06 3.2E-10 69.0 4.8 37 1-37 4-47 (331)
69 1tlt_A Putative oxidoreductase 97.9 2.1E-05 7.1E-10 65.7 6.7 94 1-126 3-97 (319)
70 3mtj_A Homoserine dehydrogenas 97.9 3.5E-05 1.2E-09 68.1 8.3 93 2-126 9-111 (444)
71 3mz0_A Inositol 2-dehydrogenas 97.9 4.1E-05 1.4E-09 64.6 8.4 97 2-126 1-98 (344)
72 3rc1_A Sugar 3-ketoreductase; 97.9 1.1E-05 3.7E-10 68.6 4.8 96 1-126 25-121 (350)
73 3m2t_A Probable dehydrogenase; 97.9 2.9E-05 1E-09 66.1 7.4 97 1-126 3-100 (359)
74 4fb5_A Probable oxidoreductase 97.9 4E-05 1.4E-09 64.9 8.2 97 1-126 23-126 (393)
75 4ew6_A D-galactose-1-dehydroge 97.9 1.7E-05 5.8E-10 67.0 5.8 89 1-126 23-113 (330)
76 2ixa_A Alpha-N-acetylgalactosa 97.8 6.2E-05 2.1E-09 65.9 8.7 103 1-126 18-123 (444)
77 3cea_A MYO-inositol 2-dehydrog 97.8 6.2E-05 2.1E-09 63.2 8.1 96 2-126 7-103 (346)
78 2ho3_A Oxidoreductase, GFO/IDH 97.8 8E-05 2.7E-09 62.2 8.4 93 4-126 2-94 (325)
79 3q2i_A Dehydrogenase; rossmann 97.8 2E-05 6.9E-10 66.7 4.7 94 3-126 13-107 (354)
80 4h3v_A Oxidoreductase domain p 97.8 2.2E-05 7.4E-10 66.5 4.8 97 1-126 4-107 (390)
81 2dc1_A L-aspartate dehydrogena 97.8 3.1E-05 1.1E-09 62.1 5.5 133 4-183 1-136 (236)
82 3do5_A HOM, homoserine dehydro 97.7 6.1E-05 2.1E-09 64.0 7.4 35 3-37 2-44 (327)
83 3ohs_X Trans-1,2-dihydrobenzen 97.7 7.3E-05 2.5E-09 62.8 7.8 96 2-126 1-98 (334)
84 1ydw_A AX110P-like protein; st 97.7 6.8E-05 2.3E-09 63.7 7.7 99 2-126 5-103 (362)
85 3f4l_A Putative oxidoreductase 97.7 6.1E-05 2.1E-09 63.6 7.3 94 3-126 2-97 (345)
86 1h6d_A Precursor form of gluco 97.7 8.2E-05 2.8E-09 65.1 8.3 101 1-126 81-182 (433)
87 3upl_A Oxidoreductase; rossman 97.7 6.7E-05 2.3E-09 66.3 7.4 110 2-124 22-137 (446)
88 4had_A Probable oxidoreductase 97.7 8.2E-05 2.8E-09 62.7 7.5 95 3-126 23-118 (350)
89 1p9l_A Dihydrodipicolinate red 97.7 7.9E-05 2.7E-09 60.9 6.5 37 4-40 1-38 (245)
90 3c1a_A Putative oxidoreductase 97.6 6.7E-05 2.3E-09 62.5 5.9 92 3-126 10-101 (315)
91 3ic5_A Putative saccharopine d 97.6 0.00011 3.7E-09 51.4 6.1 97 3-125 5-101 (118)
92 1lc0_A Biliverdin reductase A; 97.6 0.00012 4.1E-09 60.8 6.5 89 2-126 6-97 (294)
93 1xea_A Oxidoreductase, GFO/IDH 97.5 0.00049 1.7E-08 57.4 9.5 94 2-126 1-95 (323)
94 1zh8_A Oxidoreductase; TM0312, 97.5 0.00018 6.1E-09 60.7 6.8 95 3-126 18-114 (340)
95 4gqa_A NAD binding oxidoreduct 97.5 0.00014 4.8E-09 62.8 5.9 95 3-126 26-128 (412)
96 3moi_A Probable dehydrogenase; 97.5 0.00012 4E-09 62.9 5.4 94 3-126 2-96 (387)
97 3u3x_A Oxidoreductase; structu 97.4 0.00015 5.3E-09 61.7 5.6 96 1-126 24-120 (361)
98 2p2s_A Putative oxidoreductase 97.4 0.00044 1.5E-08 57.9 7.5 96 1-126 2-98 (336)
99 3v5n_A Oxidoreductase; structu 97.3 0.00049 1.7E-08 59.7 7.6 99 1-126 35-142 (417)
100 3dty_A Oxidoreductase, GFO/IDH 97.3 0.0004 1.4E-08 59.8 6.9 104 1-126 10-117 (398)
101 1j5p_A Aspartate dehydrogenase 97.2 0.00044 1.5E-08 56.8 6.0 77 4-122 13-89 (253)
102 2nvw_A Galactose/lactose metab 97.2 0.00036 1.2E-08 61.9 5.7 100 1-126 37-146 (479)
103 3o9z_A Lipopolysaccaride biosy 97.2 0.00081 2.8E-08 56.2 7.3 94 3-126 3-104 (312)
104 2glx_A 1,5-anhydro-D-fructose 97.2 0.0011 3.7E-08 55.2 8.0 93 4-126 1-94 (332)
105 1r0k_A 1-deoxy-D-xylulose 5-ph 97.2 0.00027 9.2E-09 61.4 4.2 38 3-42 4-44 (388)
106 3btv_A Galactose/lactose metab 97.1 0.00024 8.3E-09 62.1 3.7 98 3-126 20-127 (438)
107 2dt5_A AT-rich DNA-binding pro 97.1 0.0011 3.9E-08 52.7 7.0 94 3-127 80-174 (211)
108 3ip3_A Oxidoreductase, putativ 97.1 0.00015 5E-09 61.0 1.5 97 2-126 1-99 (337)
109 3oa2_A WBPB; oxidoreductase, s 97.0 0.0014 4.7E-08 54.9 7.3 94 3-126 3-105 (318)
110 2vt3_A REX, redox-sensing tran 97.0 0.0025 8.4E-08 51.0 7.7 94 3-127 85-179 (215)
111 3keo_A Redox-sensing transcrip 96.9 0.00099 3.4E-08 53.3 4.6 97 3-126 84-181 (212)
112 3oqb_A Oxidoreductase; structu 96.8 0.00093 3.2E-08 56.9 4.1 97 1-126 4-115 (383)
113 1y81_A Conserved hypothetical 96.6 0.0094 3.2E-07 44.1 8.3 85 3-126 14-102 (138)
114 3abi_A Putative uncharacterize 96.6 0.00087 3E-08 57.0 2.4 93 3-126 16-108 (365)
115 3ius_A Uncharacterized conserv 96.5 0.026 8.9E-07 45.2 10.5 33 3-36 5-37 (286)
116 3ggo_A Prephenate dehydrogenas 96.3 0.021 7.3E-07 47.7 9.6 91 3-127 33-129 (314)
117 1ebf_A Homoserine dehydrogenas 96.3 0.004 1.4E-07 53.4 4.8 35 2-36 3-40 (358)
118 3ff4_A Uncharacterized protein 96.2 0.015 5.1E-07 42.3 6.7 83 4-126 5-91 (122)
119 1qyd_A Pinoresinol-lariciresin 96.1 0.0066 2.2E-07 49.4 5.4 35 1-36 1-37 (313)
120 3qvo_A NMRA family protein; st 96.1 0.0099 3.4E-07 46.8 6.0 35 1-35 21-56 (236)
121 2bma_A Glutamate dehydrogenase 96.1 0.031 1.1E-06 49.5 9.7 101 4-120 253-363 (470)
122 3dhn_A NAD-dependent epimerase 96.0 0.014 4.8E-07 45.2 6.6 33 3-36 4-37 (227)
123 1iuk_A Hypothetical protein TT 96.0 0.016 5.6E-07 42.8 6.5 87 3-126 13-103 (140)
124 3i6i_A Putative leucoanthocyan 96.0 0.0049 1.7E-07 51.2 4.0 35 1-36 8-43 (346)
125 2duw_A Putative COA-binding pr 96.0 0.023 7.8E-07 42.2 7.3 86 3-125 13-102 (145)
126 4huj_A Uncharacterized protein 95.9 0.0065 2.2E-07 47.9 4.2 35 1-36 21-55 (220)
127 2d59_A Hypothetical protein PH 95.9 0.03 1E-06 41.4 7.5 84 3-125 22-109 (144)
128 2nu8_A Succinyl-COA ligase [AD 95.8 0.023 7.9E-07 47.0 7.2 87 3-123 7-94 (288)
129 1qyc_A Phenylcoumaran benzylic 95.7 0.0099 3.4E-07 48.2 4.7 34 1-35 1-36 (308)
130 2yfq_A Padgh, NAD-GDH, NAD-spe 95.7 0.01 3.4E-07 52.1 4.6 34 3-37 212-245 (421)
131 4gmf_A Yersiniabactin biosynth 95.6 0.031 1.1E-06 48.0 7.4 136 3-172 7-177 (372)
132 3e48_A Putative nucleoside-dip 95.5 0.016 5.4E-07 46.7 5.1 32 5-36 2-34 (289)
133 3dqp_A Oxidoreductase YLBE; al 95.3 0.073 2.5E-06 41.0 8.1 31 5-36 2-33 (219)
134 1id1_A Putative potassium chan 95.1 0.025 8.7E-07 41.6 4.8 34 1-35 1-34 (153)
135 3e8x_A Putative NAD-dependent 95.1 0.14 4.9E-06 39.7 9.3 33 3-36 21-54 (236)
136 2r6j_A Eugenol synthase 1; phe 95.0 0.026 8.8E-07 46.1 4.8 32 4-36 12-44 (318)
137 4ina_A Saccharopine dehydrogen 95.0 0.014 5E-07 50.4 3.4 155 4-177 2-167 (405)
138 3llv_A Exopolyphosphatase-rela 94.8 0.033 1.1E-06 40.2 4.5 32 3-35 6-37 (141)
139 1bgv_A Glutamate dehydrogenase 94.8 0.052 1.8E-06 47.9 6.5 103 3-123 230-343 (449)
140 1oi7_A Succinyl-COA synthetase 94.6 0.065 2.2E-06 44.3 6.3 87 3-123 7-94 (288)
141 2ew2_A 2-dehydropantoate 2-red 94.4 0.039 1.3E-06 44.8 4.6 34 1-35 1-34 (316)
142 3c1o_A Eugenol synthase; pheny 94.4 0.035 1.2E-06 45.3 4.3 32 4-36 5-37 (321)
143 3b1f_A Putative prephenate deh 94.4 0.032 1.1E-06 45.3 4.0 33 1-33 4-37 (290)
144 1zej_A HBD-9, 3-hydroxyacyl-CO 94.3 0.21 7.2E-06 41.4 8.8 39 4-47 13-51 (293)
145 3fwz_A Inner membrane protein 94.3 0.055 1.9E-06 39.3 4.6 31 4-35 8-38 (140)
146 1t2d_A LDH-P, L-lactate dehydr 94.2 0.042 1.4E-06 46.1 4.5 36 1-37 1-37 (322)
147 3a06_A 1-deoxy-D-xylulose 5-ph 94.2 0.048 1.6E-06 47.0 4.7 45 1-46 1-46 (376)
148 1vm6_A DHPR, dihydrodipicolina 94.2 0.094 3.2E-06 42.2 6.2 32 4-36 13-45 (228)
149 3ego_A Probable 2-dehydropanto 94.0 0.34 1.2E-05 39.9 9.5 32 1-35 1-32 (307)
150 3aog_A Glutamate dehydrogenase 94.0 0.2 6.8E-06 44.0 8.3 34 3-37 235-268 (440)
151 1bg6_A N-(1-D-carboxylethyl)-L 93.9 0.057 2E-06 44.8 4.7 32 2-34 3-34 (359)
152 3evt_A Phosphoglycerate dehydr 93.9 0.061 2.1E-06 45.3 4.7 31 4-35 138-168 (324)
153 2rcy_A Pyrroline carboxylate r 93.7 0.049 1.7E-06 43.4 3.7 26 1-26 2-27 (262)
154 1lss_A TRK system potassium up 93.6 0.1 3.5E-06 36.8 5.0 31 4-35 5-35 (140)
155 3r3j_A Glutamate dehydrogenase 93.6 0.22 7.6E-06 43.9 7.9 103 4-123 240-352 (456)
156 4g2n_A D-isomer specific 2-hyd 93.5 0.075 2.6E-06 45.2 4.7 31 4-35 174-204 (345)
157 3pp8_A Glyoxylate/hydroxypyruv 93.5 0.071 2.4E-06 44.7 4.5 32 4-36 140-171 (315)
158 2gas_A Isoflavone reductase; N 93.4 0.045 1.5E-06 44.2 3.1 31 4-35 3-34 (307)
159 2pi1_A D-lactate dehydrogenase 93.3 0.081 2.8E-06 44.7 4.6 31 4-35 142-172 (334)
160 3hg7_A D-isomer specific 2-hyd 93.3 0.084 2.9E-06 44.5 4.6 31 4-35 141-171 (324)
161 3gpi_A NAD-dependent epimerase 93.3 0.085 2.9E-06 42.2 4.5 35 1-36 1-35 (286)
162 2hmt_A YUAA protein; RCK, KTN, 93.3 0.079 2.7E-06 37.6 3.9 32 3-35 6-37 (144)
163 4fcc_A Glutamate dehydrogenase 93.2 0.26 8.9E-06 43.4 7.8 100 4-120 236-345 (450)
164 1gtm_A Glutamate dehydrogenase 93.2 0.099 3.4E-06 45.6 5.1 33 4-37 213-246 (419)
165 1xdw_A NAD+-dependent (R)-2-hy 93.2 0.089 3E-06 44.3 4.6 31 4-35 147-177 (331)
166 1v9l_A Glutamate dehydrogenase 93.2 0.43 1.5E-05 41.7 9.0 33 4-37 211-243 (421)
167 3tri_A Pyrroline-5-carboxylate 93.1 0.076 2.6E-06 43.4 4.1 34 1-36 1-37 (280)
168 4e21_A 6-phosphogluconate dehy 93.1 0.094 3.2E-06 44.6 4.7 31 3-34 22-52 (358)
169 2i76_A Hypothetical protein; N 93.1 0.029 9.9E-07 45.6 1.4 33 1-36 1-33 (276)
170 2yq5_A D-isomer specific 2-hyd 93.0 0.095 3.2E-06 44.5 4.6 31 4-35 149-179 (343)
171 1qp8_A Formate dehydrogenase; 93.0 0.09 3.1E-06 43.7 4.4 31 4-35 125-155 (303)
172 3c24_A Putative oxidoreductase 93.0 0.11 3.7E-06 42.2 4.8 31 3-34 11-42 (286)
173 1dxy_A D-2-hydroxyisocaproate 93.0 0.097 3.3E-06 44.1 4.6 31 4-35 146-176 (333)
174 2yv1_A Succinyl-COA ligase [AD 93.0 0.2 6.9E-06 41.4 6.5 88 3-125 13-103 (294)
175 3gt0_A Pyrroline-5-carboxylate 93.0 0.088 3E-06 41.8 4.1 25 1-26 1-25 (247)
176 3gg9_A D-3-phosphoglycerate de 93.0 0.099 3.4E-06 44.5 4.6 31 4-35 161-191 (352)
177 2wtb_A MFP2, fatty acid multif 92.9 0.27 9.2E-06 45.7 7.9 30 4-34 313-342 (725)
178 2g1u_A Hypothetical protein TM 92.9 0.17 5.8E-06 37.1 5.3 31 4-35 20-50 (155)
179 4dgs_A Dehydrogenase; structur 92.9 0.11 3.7E-06 44.1 4.8 30 4-34 172-201 (340)
180 2yv2_A Succinyl-COA synthetase 92.9 0.29 9.9E-06 40.5 7.2 88 3-125 13-104 (297)
181 2g76_A 3-PGDH, D-3-phosphoglyc 92.9 0.11 3.8E-06 43.9 4.8 31 4-35 166-196 (335)
182 3kb6_A D-lactate dehydrogenase 92.8 0.11 3.7E-06 43.9 4.6 30 4-34 142-171 (334)
183 1mx3_A CTBP1, C-terminal bindi 92.8 0.12 3.9E-06 44.0 4.8 30 4-34 169-198 (347)
184 1gdh_A D-glycerate dehydrogena 92.7 0.12 4.1E-06 43.3 4.8 31 4-35 147-177 (320)
185 3jtm_A Formate dehydrogenase, 92.7 0.1 3.5E-06 44.4 4.4 31 4-35 165-195 (351)
186 1vpd_A Tartronate semialdehyde 92.7 0.097 3.3E-06 42.5 4.1 29 4-33 6-34 (299)
187 3gvx_A Glycerate dehydrogenase 92.7 0.091 3.1E-06 43.6 3.9 31 4-35 123-153 (290)
188 4e12_A Diketoreductase; oxidor 92.6 0.14 4.8E-06 41.7 5.0 34 1-36 1-35 (283)
189 4hy3_A Phosphoglycerate oxidor 92.6 0.11 3.8E-06 44.5 4.4 31 4-35 177-207 (365)
190 2cuk_A Glycerate dehydrogenase 92.6 0.12 4.2E-06 43.1 4.6 31 4-35 145-175 (311)
191 4e5n_A Thermostable phosphite 92.5 0.095 3.2E-06 44.2 3.9 31 4-35 146-176 (330)
192 3nkl_A UDP-D-quinovosamine 4-d 92.5 0.19 6.4E-06 36.1 5.1 34 3-36 4-37 (141)
193 1y1p_A ARII, aldehyde reductas 92.5 1.4 4.7E-05 35.6 10.9 32 3-35 11-43 (342)
194 3d1l_A Putative NADP oxidoredu 92.5 0.13 4.4E-06 41.1 4.6 32 4-36 11-42 (266)
195 3k92_A NAD-GDH, NAD-specific g 92.5 0.29 1E-05 42.8 7.1 34 3-37 221-254 (424)
196 3slg_A PBGP3 protein; structur 92.5 0.12 4E-06 43.0 4.4 36 1-36 22-58 (372)
197 2vns_A Metalloreductase steap3 92.5 0.13 4.3E-06 40.2 4.3 32 3-35 28-59 (215)
198 4ezb_A Uncharacterized conserv 92.5 0.15 5.1E-06 42.4 5.0 32 3-34 24-55 (317)
199 3ghy_A Ketopantoate reductase 92.4 0.12 4E-06 43.1 4.3 33 1-34 1-33 (335)
200 1wwk_A Phosphoglycerate dehydr 92.3 0.14 4.7E-06 42.6 4.6 31 4-35 143-173 (307)
201 1j4a_A D-LDH, D-lactate dehydr 92.3 0.14 4.7E-06 43.1 4.6 31 4-35 147-177 (333)
202 2w2k_A D-mandelate dehydrogena 92.3 0.15 5.1E-06 43.2 4.8 31 4-35 164-195 (348)
203 3dtt_A NADP oxidoreductase; st 92.2 0.17 5.8E-06 40.2 4.9 32 3-35 19-50 (245)
204 3cky_A 2-hydroxymethyl glutara 92.2 0.13 4.3E-06 41.8 4.2 30 3-33 4-33 (301)
205 2ekl_A D-3-phosphoglycerate de 92.2 0.14 4.9E-06 42.6 4.6 31 4-35 143-173 (313)
206 3oet_A Erythronate-4-phosphate 92.1 0.14 5E-06 44.1 4.6 30 4-34 120-149 (381)
207 3g0o_A 3-hydroxyisobutyrate de 92.1 0.16 5.4E-06 41.7 4.7 31 3-34 7-37 (303)
208 3doj_A AT3G25530, dehydrogenas 92.1 0.17 6E-06 41.6 4.9 31 3-34 21-51 (310)
209 3l4b_C TRKA K+ channel protien 92.1 0.12 4.2E-06 40.1 3.8 30 5-35 2-31 (218)
210 2o4c_A Erythronate-4-phosphate 92.1 0.15 5.1E-06 44.0 4.6 30 4-34 117-146 (380)
211 3c85_A Putative glutathione-re 92.0 0.14 4.9E-06 38.4 4.0 31 4-35 40-71 (183)
212 1sc6_A PGDH, D-3-phosphoglycer 92.0 0.15 5.2E-06 44.2 4.6 30 4-34 146-175 (404)
213 3ba1_A HPPR, hydroxyphenylpyru 92.0 0.14 4.7E-06 43.2 4.2 30 4-34 165-194 (333)
214 2x0j_A Malate dehydrogenase; o 91.9 0.18 6.3E-06 41.8 4.9 33 4-36 1-33 (294)
215 2gcg_A Glyoxylate reductase/hy 91.9 0.15 5E-06 42.8 4.3 31 4-35 156-186 (330)
216 3hwr_A 2-dehydropantoate 2-red 91.9 1.2 4.2E-05 36.6 9.9 30 3-33 19-48 (318)
217 1evy_A Glycerol-3-phosphate de 91.9 0.14 4.8E-06 43.0 4.2 31 4-35 16-46 (366)
218 2iz1_A 6-phosphogluconate dehy 91.8 0.15 5E-06 44.9 4.3 33 1-34 3-35 (474)
219 1ldn_A L-lactate dehydrogenase 91.7 0.37 1.3E-05 40.0 6.6 33 3-36 6-39 (316)
220 2ahr_A Putative pyrroline carb 91.7 0.26 8.9E-06 39.1 5.4 31 4-36 4-34 (259)
221 2d0i_A Dehydrogenase; structur 91.7 0.16 5.5E-06 42.7 4.4 31 4-35 147-177 (333)
222 2dbq_A Glyoxylate reductase; D 91.7 0.18 6.1E-06 42.4 4.6 31 4-35 151-181 (334)
223 3mw9_A GDH 1, glutamate dehydr 91.6 1.9 6.3E-05 38.5 11.2 33 4-37 245-277 (501)
224 2g5c_A Prephenate dehydrogenas 91.6 0.21 7.1E-06 40.2 4.8 30 4-33 2-32 (281)
225 1hdo_A Biliverdin IX beta redu 91.6 0.27 9.1E-06 36.8 5.2 34 1-35 1-35 (206)
226 2izz_A Pyrroline-5-carboxylate 91.6 0.15 5.1E-06 42.3 4.0 32 3-34 22-56 (322)
227 2nac_A NAD-dependent formate d 91.6 0.17 5.7E-06 43.8 4.4 31 4-35 192-222 (393)
228 2uyy_A N-PAC protein; long-cha 91.5 0.18 6.2E-06 41.3 4.4 30 4-34 31-60 (316)
229 3jv7_A ADH-A; dehydrogenase, n 91.5 0.63 2.2E-05 38.5 7.8 135 4-168 173-310 (345)
230 3l6d_A Putative oxidoreductase 91.4 0.19 6.3E-06 41.4 4.3 31 3-34 9-39 (306)
231 3r6d_A NAD-dependent epimerase 91.4 0.23 7.9E-06 38.1 4.7 34 1-35 3-38 (221)
232 3qha_A Putative oxidoreductase 91.3 0.19 6.6E-06 41.1 4.3 31 3-34 15-45 (296)
233 3d4o_A Dipicolinate synthase s 91.3 0.24 8.1E-06 40.6 4.9 31 4-35 156-186 (293)
234 2cvz_A Dehydrogenase, 3-hydrox 91.2 0.15 5.2E-06 40.9 3.6 29 4-34 2-30 (289)
235 3dfz_A SIRC, precorrin-2 dehyd 91.2 1.1 3.6E-05 35.7 8.5 30 4-34 32-61 (223)
236 2h78_A Hibadh, 3-hydroxyisobut 91.2 0.19 6.4E-06 41.0 4.1 31 3-34 3-33 (302)
237 4dll_A 2-hydroxy-3-oxopropiona 91.2 0.21 7E-06 41.4 4.4 31 3-34 31-61 (320)
238 3qsg_A NAD-binding phosphogluc 91.0 0.18 6E-06 41.7 3.9 31 3-34 24-55 (312)
239 4gwg_A 6-phosphogluconate dehy 90.9 0.19 6.6E-06 44.6 4.2 34 1-35 2-35 (484)
240 2gn4_A FLAA1 protein, UDP-GLCN 90.9 0.49 1.7E-05 39.3 6.5 33 3-35 21-55 (344)
241 2zyd_A 6-phosphogluconate dehy 90.8 0.2 6.9E-06 44.2 4.3 34 1-35 13-46 (480)
242 3k5p_A D-3-phosphoglycerate de 90.8 0.24 8E-06 43.2 4.6 30 4-34 157-186 (416)
243 2rir_A Dipicolinate synthase, 90.8 0.28 9.5E-06 40.3 4.9 31 4-35 158-188 (300)
244 1yb4_A Tartronic semialdehyde 90.8 0.14 4.9E-06 41.3 3.1 30 4-34 4-33 (295)
245 2j6i_A Formate dehydrogenase; 90.7 0.2 6.9E-06 42.7 4.0 30 4-34 165-195 (364)
246 1ur5_A Malate dehydrogenase; o 90.5 0.33 1.1E-05 40.2 5.1 34 1-36 1-34 (309)
247 2raf_A Putative dinucleotide-b 90.3 0.32 1.1E-05 37.8 4.6 31 3-34 19-49 (209)
248 3fpc_A NADP-dependent alcohol 90.3 1.2 4.2E-05 36.9 8.5 30 4-34 168-198 (352)
249 3two_A Mannitol dehydrogenase; 90.3 0.72 2.5E-05 38.2 7.1 128 4-168 178-308 (348)
250 3nep_X Malate dehydrogenase; h 90.2 0.79 2.7E-05 38.2 7.2 32 4-36 1-33 (314)
251 3pef_A 6-phosphogluconate dehy 90.2 0.32 1.1E-05 39.3 4.7 30 4-34 2-31 (287)
252 3ldh_A Lactate dehydrogenase; 90.1 0.99 3.4E-05 38.0 7.7 32 4-36 22-54 (330)
253 2o3j_A UDP-glucose 6-dehydroge 90.1 0.22 7.5E-06 43.9 3.8 42 2-46 8-50 (481)
254 3pdu_A 3-hydroxyisobutyrate de 90.0 0.18 6.2E-06 40.9 3.0 30 4-34 2-31 (287)
255 3c7a_A Octopine dehydrogenase; 89.9 0.3 1E-05 41.5 4.5 33 1-34 1-33 (404)
256 2f1k_A Prephenate dehydrogenas 89.9 0.35 1.2E-05 38.7 4.6 29 5-34 2-30 (279)
257 3m2p_A UDP-N-acetylglucosamine 89.8 0.4 1.4E-05 38.7 5.0 34 1-36 1-35 (311)
258 2q3e_A UDP-glucose 6-dehydroge 89.7 0.25 8.4E-06 43.3 3.8 34 1-34 2-37 (467)
259 3gg2_A Sugar dehydrogenase, UD 89.7 0.34 1.2E-05 42.4 4.7 41 1-46 1-41 (450)
260 1x0v_A GPD-C, GPDH-C, glycerol 89.6 0.22 7.4E-06 41.4 3.3 25 1-25 6-30 (354)
261 3i83_A 2-dehydropantoate 2-red 89.4 0.39 1.3E-05 39.7 4.7 33 1-35 1-33 (320)
262 2y1e_A 1-deoxy-D-xylulose 5-ph 89.3 0.44 1.5E-05 41.2 4.9 43 4-46 22-66 (398)
263 1xq6_A Unknown protein; struct 89.3 0.57 1.9E-05 36.1 5.3 35 1-35 2-38 (253)
264 1jay_A Coenzyme F420H2:NADP+ o 89.3 0.51 1.8E-05 36.0 5.0 30 5-35 2-32 (212)
265 4gbj_A 6-phosphogluconate dehy 89.2 0.3 1E-05 40.2 3.8 30 4-34 6-35 (297)
266 3ip1_A Alcohol dehydrogenase, 89.1 1.8 6E-05 36.8 8.7 30 4-34 215-245 (404)
267 3d0o_A L-LDH 1, L-lactate dehy 89.1 0.38 1.3E-05 40.0 4.4 35 2-36 5-39 (317)
268 3l9w_A Glutathione-regulated p 89.1 0.33 1.1E-05 42.1 4.1 38 4-45 5-42 (413)
269 1ygy_A PGDH, D-3-phosphoglycer 89.1 0.44 1.5E-05 42.5 5.1 30 4-34 143-172 (529)
270 1f0y_A HCDH, L-3-hydroxyacyl-C 89.0 0.49 1.7E-05 38.6 4.9 31 3-34 15-45 (302)
271 4g65_A TRK system potassium up 88.9 0.45 1.5E-05 41.7 4.9 40 3-46 3-42 (461)
272 2pv7_A T-protein [includes: ch 88.8 0.42 1.4E-05 39.1 4.4 30 4-34 22-52 (298)
273 1q0q_A 1-deoxy-D-xylulose 5-ph 88.8 0.5 1.7E-05 40.9 4.9 43 3-46 9-53 (406)
274 3p7m_A Malate dehydrogenase; p 88.7 0.53 1.8E-05 39.4 5.0 35 1-36 3-37 (321)
275 2tmg_A Protein (glutamate dehy 88.6 0.62 2.1E-05 40.6 5.5 35 3-37 209-243 (415)
276 1ks9_A KPA reductase;, 2-dehyd 88.4 0.51 1.7E-05 37.6 4.6 30 5-35 2-31 (291)
277 3au8_A 1-deoxy-D-xylulose 5-ph 88.4 0.41 1.4E-05 42.2 4.2 44 2-46 76-124 (488)
278 2qyt_A 2-dehydropantoate 2-red 88.3 0.32 1.1E-05 39.5 3.4 33 3-35 8-45 (317)
279 1i36_A Conserved hypothetical 88.2 0.5 1.7E-05 37.4 4.4 30 5-36 2-31 (264)
280 2yjz_A Metalloreductase steap4 88.0 0.093 3.2E-06 40.9 0.0 31 3-34 19-49 (201)
281 1z82_A Glycerol-3-phosphate de 88.2 0.53 1.8E-05 39.0 4.7 33 2-35 13-45 (335)
282 3ew7_A LMO0794 protein; Q8Y8U8 88.2 0.64 2.2E-05 35.1 4.8 31 5-36 2-33 (221)
283 2dpo_A L-gulonate 3-dehydrogen 88.2 0.46 1.6E-05 39.6 4.3 41 3-47 6-46 (319)
284 3oj0_A Glutr, glutamyl-tRNA re 88.1 0.31 1.1E-05 35.2 2.9 31 4-36 22-52 (144)
285 3hn2_A 2-dehydropantoate 2-red 88.0 0.35 1.2E-05 39.7 3.4 33 1-35 1-33 (312)
286 4ej6_A Putative zinc-binding d 87.9 1.7 5.9E-05 36.4 7.8 30 4-34 184-214 (370)
287 3g17_A Similar to 2-dehydropan 87.9 0.29 9.8E-06 40.0 2.8 33 1-35 1-33 (294)
288 2gf2_A Hibadh, 3-hydroxyisobut 87.8 0.39 1.3E-05 38.8 3.5 29 5-34 2-30 (296)
289 1e6u_A GDP-fucose synthetase; 87.8 0.46 1.6E-05 38.3 4.0 33 1-34 1-34 (321)
290 3kkj_A Amine oxidase, flavin-c 87.8 0.55 1.9E-05 35.0 4.2 32 3-35 2-33 (336)
291 2hun_A 336AA long hypothetical 87.8 0.53 1.8E-05 38.2 4.4 35 1-35 1-37 (336)
292 3h2s_A Putative NADH-flavin re 87.6 0.72 2.5E-05 35.1 4.8 31 5-36 2-33 (224)
293 3d64_A Adenosylhomocysteinase; 87.5 0.58 2E-05 41.6 4.8 30 4-34 278-307 (494)
294 3dfu_A Uncharacterized protein 87.5 0.17 5.7E-06 40.7 1.1 32 3-35 6-37 (232)
295 1c1d_A L-phenylalanine dehydro 87.5 0.65 2.2E-05 39.6 4.8 31 4-36 176-206 (355)
296 1yqg_A Pyrroline-5-carboxylate 87.4 0.5 1.7E-05 37.4 3.9 31 5-36 2-32 (263)
297 3obb_A Probable 3-hydroxyisobu 87.4 0.55 1.9E-05 38.8 4.3 40 4-47 4-43 (300)
298 3gvi_A Malate dehydrogenase; N 87.3 0.68 2.3E-05 38.8 4.8 34 1-36 5-39 (324)
299 1yqd_A Sinapyl alcohol dehydro 87.2 0.6 2E-05 39.2 4.4 31 4-35 189-219 (366)
300 1piw_A Hypothetical zinc-type 87.0 2.5 8.5E-05 35.1 8.2 31 4-35 181-211 (360)
301 2d8a_A PH0655, probable L-thre 87.0 0.92 3.2E-05 37.6 5.5 30 4-34 169-199 (348)
302 1np3_A Ketol-acid reductoisome 86.9 0.59 2E-05 39.1 4.2 30 4-34 17-46 (338)
303 3ruf_A WBGU; rossmann fold, UD 86.8 0.66 2.3E-05 37.9 4.5 34 2-36 24-58 (351)
304 3ktd_A Prephenate dehydrogenas 86.7 0.62 2.1E-05 39.3 4.2 30 4-34 9-38 (341)
305 2a35_A Hypothetical protein PA 86.6 0.61 2.1E-05 35.2 3.9 33 3-35 5-39 (215)
306 1leh_A Leucine dehydrogenase; 86.6 0.97 3.3E-05 38.5 5.5 31 4-36 174-204 (364)
307 2axq_A Saccharopine dehydrogen 86.3 0.69 2.3E-05 40.7 4.5 33 3-35 23-55 (467)
308 3mwd_B ATP-citrate synthase; A 86.2 1.8 6.1E-05 36.5 6.8 97 3-125 10-113 (334)
309 3k96_A Glycerol-3-phosphate de 86.1 0.76 2.6E-05 38.9 4.5 31 3-34 29-59 (356)
310 2ph5_A Homospermidine synthase 86.1 0.49 1.7E-05 42.0 3.4 97 4-126 14-114 (480)
311 3h9u_A Adenosylhomocysteinase; 86.0 0.77 2.6E-05 40.3 4.6 31 4-36 212-242 (436)
312 2dq4_A L-threonine 3-dehydroge 86.0 0.96 3.3E-05 37.4 5.1 31 4-35 166-197 (343)
313 3g79_A NDP-N-acetyl-D-galactos 85.9 0.74 2.5E-05 40.7 4.5 33 3-35 18-51 (478)
314 1v8b_A Adenosylhomocysteinase; 85.9 0.6 2E-05 41.4 3.9 30 4-34 258-287 (479)
315 1uuf_A YAHK, zinc-type alcohol 85.8 0.75 2.6E-05 38.7 4.4 31 4-35 196-226 (369)
316 4b8w_A GDP-L-fucose synthase; 85.8 0.68 2.3E-05 36.8 3.9 26 1-26 4-30 (319)
317 3n58_A Adenosylhomocysteinase; 85.7 0.8 2.7E-05 40.4 4.5 29 4-33 248-276 (464)
318 3zwc_A Peroxisomal bifunctiona 85.6 1.8 6.2E-05 40.3 7.2 146 4-172 317-487 (742)
319 3q2o_A Phosphoribosylaminoimid 85.6 1 3.6E-05 37.9 5.2 31 4-35 15-45 (389)
320 3vps_A TUNA, NAD-dependent epi 85.5 0.85 2.9E-05 36.5 4.4 33 3-36 7-40 (321)
321 4b4o_A Epimerase family protei 85.5 1 3.5E-05 36.1 4.8 31 4-35 1-32 (298)
322 2ewd_A Lactate dehydrogenase,; 85.4 0.85 2.9E-05 37.6 4.4 35 1-36 1-36 (317)
323 1lld_A L-lactate dehydrogenase 85.3 0.97 3.3E-05 36.9 4.7 31 3-33 7-38 (319)
324 3m6i_A L-arabinitol 4-dehydrog 85.3 3 0.0001 34.6 7.8 30 4-34 181-211 (363)
325 1txg_A Glycerol-3-phosphate de 85.2 0.74 2.5E-05 37.6 4.0 30 5-35 2-31 (335)
326 4a2c_A Galactitol-1-phosphate 85.2 0.66 2.3E-05 38.2 3.7 30 4-33 162-191 (346)
327 2fp4_A Succinyl-COA ligase [GD 84.7 1.9 6.5E-05 35.7 6.3 86 4-123 14-101 (305)
328 1e3j_A NADP(H)-dependent ketos 84.6 5.2 0.00018 33.0 9.0 30 4-34 170-199 (352)
329 2hjr_A Malate dehydrogenase; m 84.6 1.3 4.3E-05 37.0 5.2 33 3-36 14-46 (328)
330 2csu_A 457AA long hypothetical 84.5 3.4 0.00012 36.0 8.1 83 3-123 8-94 (457)
331 1zcj_A Peroxisomal bifunctiona 84.5 1.2 4E-05 39.0 5.1 31 3-34 37-67 (463)
332 1yj8_A Glycerol-3-phosphate de 84.5 0.55 1.9E-05 39.6 2.9 23 3-25 21-43 (375)
333 3st7_A Capsular polysaccharide 84.4 0.97 3.3E-05 37.4 4.4 43 5-48 2-45 (369)
334 4dvj_A Putative zinc-dependent 84.4 1.1 3.7E-05 37.6 4.7 96 4-123 173-269 (363)
335 2pgd_A 6-phosphogluconate dehy 84.4 0.83 2.8E-05 40.2 4.1 30 4-34 3-32 (482)
336 3uog_A Alcohol dehydrogenase; 84.3 2.3 7.9E-05 35.4 6.7 146 4-179 191-337 (363)
337 1oc2_A DTDP-glucose 4,6-dehydr 84.2 1 3.5E-05 36.7 4.4 35 1-35 1-38 (348)
338 3pid_A UDP-glucose 6-dehydroge 84.1 1.1 3.9E-05 39.0 4.8 40 3-47 36-75 (432)
339 3sc6_A DTDP-4-dehydrorhamnose 84.1 0.78 2.7E-05 36.4 3.5 31 4-35 6-37 (287)
340 1pgj_A 6PGDH, 6-PGDH, 6-phosph 84.0 0.85 2.9E-05 40.1 4.0 30 4-34 2-31 (478)
341 2b69_A UDP-glucuronate decarbo 84.0 1.3 4.4E-05 36.2 4.9 32 3-35 27-59 (343)
342 3orq_A N5-carboxyaminoimidazol 84.0 1.4 4.7E-05 37.2 5.2 31 3-34 12-42 (377)
343 1ff9_A Saccharopine reductase; 83.8 1.1 3.8E-05 39.1 4.6 34 1-35 1-34 (450)
344 3aoe_E Glutamate dehydrogenase 83.8 1.3 4.5E-05 38.6 5.0 33 3-36 218-250 (419)
345 2p4q_A 6-phosphogluconate dehy 83.7 0.97 3.3E-05 40.1 4.3 32 3-35 10-41 (497)
346 4egb_A DTDP-glucose 4,6-dehydr 83.7 1 3.4E-05 36.8 4.1 34 3-36 24-59 (346)
347 3tl2_A Malate dehydrogenase; c 83.6 1.4 4.7E-05 36.7 5.0 32 3-36 8-40 (315)
348 3uko_A Alcohol dehydrogenase c 83.6 1.3 4.5E-05 37.1 4.9 30 4-34 195-225 (378)
349 1y7t_A Malate dehydrogenase; N 83.4 1.2 4.2E-05 36.7 4.6 34 1-34 1-42 (327)
350 3eag_A UDP-N-acetylmuramate:L- 83.3 4.5 0.00015 33.3 8.0 90 4-124 5-95 (326)
351 3gvp_A Adenosylhomocysteinase 83.3 1.2 4.1E-05 39.0 4.6 31 4-36 221-251 (435)
352 2wm3_A NMRA-like family domain 83.2 1.2 4.1E-05 35.6 4.3 34 3-36 5-39 (299)
353 1sb8_A WBPP; epimerase, 4-epim 82.9 1.3 4.4E-05 36.3 4.5 32 3-35 27-59 (352)
354 2ydy_A Methionine adenosyltran 82.7 1.6 5.5E-05 35.0 4.9 30 4-34 3-33 (315)
355 2bka_A CC3, TAT-interacting pr 82.6 1.2 4E-05 34.4 3.9 33 3-35 18-52 (242)
356 2c20_A UDP-glucose 4-epimerase 82.5 1.6 5.5E-05 35.1 4.9 31 4-35 2-33 (330)
357 3mog_A Probable 3-hydroxybutyr 82.4 1.2 4E-05 39.4 4.2 41 3-47 5-45 (483)
358 1mv8_A GMD, GDP-mannose 6-dehy 82.2 1.1 3.9E-05 38.6 4.1 38 5-46 2-39 (436)
359 2d5c_A AROE, shikimate 5-dehyd 82.2 1.3 4.4E-05 35.4 4.1 29 5-34 118-146 (263)
360 1hyh_A L-hicdh, L-2-hydroxyiso 82.1 1.3 4.5E-05 36.3 4.2 30 4-33 2-32 (309)
361 2i99_A MU-crystallin homolog; 82.0 1.6 5.6E-05 35.9 4.8 33 4-36 136-168 (312)
362 2vhw_A Alanine dehydrogenase; 82.0 1.7 5.7E-05 36.9 4.9 31 4-35 169-199 (377)
363 1y6j_A L-lactate dehydrogenase 81.9 1.6 5.4E-05 36.2 4.7 33 3-36 7-40 (318)
364 2x4g_A Nucleoside-diphosphate- 81.9 1.8 6.3E-05 34.9 5.0 32 4-36 14-46 (342)
365 1b8p_A Protein (malate dehydro 81.9 1.4 4.9E-05 36.6 4.4 33 3-36 5-44 (329)
366 3qwb_A Probable quinone oxidor 81.8 2.4 8.4E-05 34.7 5.8 31 4-35 150-181 (334)
367 3k5i_A Phosphoribosyl-aminoimi 81.7 1.5 5E-05 37.4 4.5 31 3-34 24-54 (403)
368 3h5n_A MCCB protein; ubiquitin 81.6 1.7 5.8E-05 36.7 4.8 23 4-26 119-141 (353)
369 3ouz_A Biotin carboxylase; str 81.6 1.2 4.2E-05 38.2 4.1 33 1-34 4-36 (446)
370 2z1m_A GDP-D-mannose dehydrata 81.6 1.7 5.8E-05 35.1 4.7 34 1-35 1-35 (345)
371 2yy7_A L-threonine dehydrogena 81.5 1.1 3.9E-05 35.7 3.6 34 1-35 1-36 (312)
372 1rjw_A ADH-HT, alcohol dehydro 81.3 2.4 8.3E-05 34.9 5.6 31 4-35 166-196 (339)
373 2b5w_A Glucose dehydrogenase; 81.3 2.5 8.5E-05 35.1 5.7 31 4-35 174-207 (357)
374 2aef_A Calcium-gated potassium 81.2 1 3.5E-05 35.1 3.1 29 4-34 10-38 (234)
375 4h7p_A Malate dehydrogenase; s 81.0 2 6.7E-05 36.4 5.0 26 1-26 22-48 (345)
376 1orr_A CDP-tyvelose-2-epimeras 81.0 1.8 6.2E-05 35.0 4.7 31 4-35 2-33 (347)
377 2jhf_A Alcohol dehydrogenase E 80.8 2.4 8.1E-05 35.4 5.4 30 4-34 193-223 (374)
378 3s2e_A Zinc-containing alcohol 80.6 2 6.8E-05 35.3 4.8 133 4-168 168-303 (340)
379 3krt_A Crotonyl COA reductase; 80.5 2.9 9.8E-05 36.1 6.0 40 4-47 230-270 (456)
380 1xa0_A Putative NADPH dependen 80.3 3.8 0.00013 33.4 6.5 31 5-36 152-183 (328)
381 2z2v_A Hypothetical protein PH 80.2 1.9 6.4E-05 36.5 4.6 93 3-126 16-108 (365)
382 4ea9_A Perosamine N-acetyltran 80.1 2.3 7.7E-05 32.9 4.8 33 3-36 12-44 (220)
383 1pl8_A Human sorbitol dehydrog 80.1 1.8 6.3E-05 35.9 4.5 31 4-35 173-204 (356)
384 3sxp_A ADP-L-glycero-D-mannohe 80.0 2.4 8.1E-05 34.9 5.1 34 3-36 10-45 (362)
385 3ce6_A Adenosylhomocysteinase; 79.9 1.8 6.1E-05 38.5 4.5 30 4-34 275-304 (494)
386 3jyn_A Quinone oxidoreductase; 79.7 2 6.9E-05 35.1 4.6 31 4-35 142-173 (325)
387 2q1w_A Putative nucleotide sug 79.6 2.3 7.9E-05 34.5 4.9 32 3-35 21-53 (333)
388 3pqe_A L-LDH, L-lactate dehydr 79.6 1.8 6.2E-05 36.2 4.3 33 3-36 5-38 (326)
389 3h8v_A Ubiquitin-like modifier 79.5 1.2 4.2E-05 36.8 3.2 24 3-26 36-59 (292)
390 1ek6_A UDP-galactose 4-epimera 79.5 2.3 7.8E-05 34.5 4.8 33 1-35 1-34 (348)
391 3k6j_A Protein F01G10.3, confi 79.4 2.2 7.5E-05 37.5 4.9 31 3-34 54-84 (460)
392 3bfp_A Acetyltransferase; LEFT 79.4 1.6 5.4E-05 33.3 3.6 34 1-35 1-34 (194)
393 1t2a_A GDP-mannose 4,6 dehydra 79.4 2.4 8.1E-05 35.0 5.0 32 4-36 25-57 (375)
394 2bll_A Protein YFBG; decarboxy 79.3 2.5 8.4E-05 34.2 4.9 32 5-36 2-34 (345)
395 1pzg_A LDH, lactate dehydrogen 79.3 2.3 7.9E-05 35.4 4.9 32 4-36 10-41 (331)
396 1pjq_A CYSG, siroheme synthase 79.3 8.8 0.0003 33.3 8.8 94 4-127 13-107 (457)
397 1f8f_A Benzyl alcohol dehydrog 79.3 1.8 6.3E-05 36.1 4.2 30 4-34 192-222 (371)
398 1gpj_A Glutamyl-tRNA reductase 79.1 1.6 5.5E-05 37.3 3.9 31 4-35 168-199 (404)
399 2hk9_A Shikimate dehydrogenase 79.1 1.8 6.2E-05 34.9 4.0 30 4-34 130-159 (275)
400 1dlj_A UDP-glucose dehydrogena 79.0 1.9 6.5E-05 36.9 4.3 28 5-34 2-29 (402)
401 1p0f_A NADP-dependent alcohol 78.8 2 7E-05 35.8 4.4 30 4-34 193-223 (373)
402 4hb9_A Similarities with proba 78.8 2.3 7.8E-05 35.0 4.7 30 4-34 2-31 (412)
403 3ay3_A NAD-dependent epimerase 78.6 0.82 2.8E-05 36.0 1.8 33 1-35 1-34 (267)
404 3nx4_A Putative oxidoreductase 78.6 3 0.0001 33.9 5.3 30 5-35 149-179 (324)
405 2c5a_A GDP-mannose-3', 5'-epim 78.5 2.8 9.5E-05 34.8 5.2 32 3-35 29-61 (379)
406 2q1s_A Putative nucleotide sug 78.4 2.5 8.4E-05 35.1 4.8 32 4-35 33-65 (377)
407 2cf5_A Atccad5, CAD, cinnamyl 78.3 1.1 3.8E-05 37.3 2.6 31 4-35 182-212 (357)
408 3gqv_A Enoyl reductase; medium 77.7 6.8 0.00023 32.6 7.4 30 4-34 166-196 (371)
409 3fi9_A Malate dehydrogenase; s 77.7 2.4 8.2E-05 35.8 4.5 35 1-36 6-42 (343)
410 1x13_A NAD(P) transhydrogenase 77.5 2.4 8.3E-05 36.3 4.5 31 4-36 173-203 (401)
411 3fbg_A Putative arginate lyase 77.4 3 0.0001 34.4 5.0 40 4-47 152-192 (346)
412 1rkx_A CDP-glucose-4,6-dehydra 77.3 2.5 8.4E-05 34.6 4.4 33 3-36 9-42 (357)
413 2eez_A Alanine dehydrogenase; 77.3 2.9 9.9E-05 35.2 4.9 31 4-35 167-197 (369)
414 1a5z_A L-lactate dehydrogenase 77.3 2 7E-05 35.4 3.9 31 4-36 1-33 (319)
415 3vku_A L-LDH, L-lactate dehydr 77.3 2.5 8.5E-05 35.4 4.4 33 3-36 9-42 (326)
416 1xgk_A Nitrogen metabolite rep 77.2 2.7 9.1E-05 34.9 4.6 32 3-35 5-37 (352)
417 2x6t_A ADP-L-glycero-D-manno-h 77.2 2.6 8.8E-05 34.5 4.5 33 4-36 47-80 (357)
418 1vj0_A Alcohol dehydrogenase, 77.2 2 6.7E-05 36.1 3.8 142 4-168 197-341 (380)
419 1n7h_A GDP-D-mannose-4,6-dehyd 77.1 3 0.0001 34.4 5.0 31 4-35 29-60 (381)
420 2y0c_A BCEC, UDP-glucose dehyd 77.1 2.5 8.5E-05 37.1 4.6 41 3-47 8-48 (478)
421 1omo_A Alanine dehydrogenase; 76.9 3.3 0.00011 34.3 5.1 33 4-36 126-158 (322)
422 4aj2_A L-lactate dehydrogenase 76.7 3.4 0.00012 34.6 5.1 33 3-36 19-52 (331)
423 3ado_A Lambda-crystallin; L-gu 76.7 2.5 8.6E-05 35.3 4.3 36 4-43 7-42 (319)
424 1l7d_A Nicotinamide nucleotide 76.0 2.8 9.7E-05 35.5 4.5 31 4-36 173-203 (384)
425 4e4t_A Phosphoribosylaminoimid 76.0 3.2 0.00011 35.6 4.9 30 4-34 36-65 (419)
426 3rft_A Uronate dehydrogenase; 75.5 2.4 8.1E-05 33.5 3.7 34 1-35 1-35 (267)
427 3p2y_A Alanine dehydrogenase/p 75.4 3.1 0.00011 35.7 4.6 31 4-36 185-215 (381)
428 3ehe_A UDP-glucose 4-epimerase 75.2 2.5 8.7E-05 33.8 3.9 30 4-35 2-32 (313)
429 1guz_A Malate dehydrogenase; o 75.1 3.5 0.00012 33.8 4.8 29 5-33 2-31 (310)
430 2hrz_A AGR_C_4963P, nucleoside 75.0 2.7 9.2E-05 34.0 4.0 34 2-35 13-53 (342)
431 2pzm_A Putative nucleotide sug 75.0 3.7 0.00013 33.2 4.9 32 3-35 20-52 (330)
432 2zqz_A L-LDH, L-lactate dehydr 74.9 3.1 0.00011 34.6 4.4 34 3-36 9-42 (326)
433 2vn8_A Reticulon-4-interacting 74.7 5.5 0.00019 33.2 6.0 30 4-34 185-215 (375)
434 3oh8_A Nucleoside-diphosphate 74.6 3.7 0.00013 36.0 5.0 33 3-36 147-180 (516)
435 3enk_A UDP-glucose 4-epimerase 74.6 4 0.00014 32.9 5.0 32 3-35 5-37 (341)
436 2fzw_A Alcohol dehydrogenase c 74.0 5.8 0.0002 32.9 5.9 30 4-34 192-222 (373)
437 4a9w_A Monooxygenase; baeyer-v 73.9 3.2 0.00011 33.3 4.2 34 1-35 1-34 (357)
438 1ez4_A Lactate dehydrogenase; 73.9 3.3 0.00011 34.3 4.3 34 3-36 5-38 (318)
439 2v6b_A L-LDH, L-lactate dehydr 73.5 4.1 0.00014 33.3 4.8 32 4-36 1-33 (304)
440 3ko8_A NAD-dependent epimerase 73.2 4.1 0.00014 32.4 4.6 30 5-35 2-32 (312)
441 4dio_A NAD(P) transhydrogenase 73.1 3.7 0.00013 35.5 4.5 31 4-36 191-221 (405)
442 1rpn_A GDP-mannose 4,6-dehydra 73.0 4.4 0.00015 32.6 4.8 33 3-36 14-47 (335)
443 1kew_A RMLB;, DTDP-D-glucose 4 72.8 3.6 0.00012 33.5 4.3 31 5-35 2-33 (361)
444 1oju_A MDH, malate dehydrogena 72.6 3.4 0.00012 33.9 4.1 32 4-36 1-33 (294)
445 2bi7_A UDP-galactopyranose mut 72.5 5.2 0.00018 33.6 5.3 34 1-35 1-34 (384)
446 3lk7_A UDP-N-acetylmuramoylala 72.3 15 0.00051 31.6 8.3 31 4-36 10-40 (451)
447 2eih_A Alcohol dehydrogenase; 72.3 7.3 0.00025 31.9 6.1 31 4-35 168-199 (343)
448 1z7e_A Protein aRNA; rossmann 72.2 4.2 0.00014 36.7 4.9 34 3-36 315-349 (660)
449 2xdo_A TETX2 protein; tetracyc 71.9 5.1 0.00018 33.4 5.1 32 3-35 26-57 (398)
450 2rh8_A Anthocyanidin reductase 71.7 4.8 0.00016 32.5 4.8 31 4-35 10-41 (338)
451 3ax6_A Phosphoribosylaminoimid 71.6 5.1 0.00018 33.3 5.1 31 4-35 2-32 (380)
452 4id9_A Short-chain dehydrogena 71.1 4.1 0.00014 33.0 4.2 32 3-35 19-51 (347)
453 2dkn_A 3-alpha-hydroxysteroid 71.1 5.7 0.00019 30.4 4.9 31 4-35 2-33 (255)
454 1db3_A GDP-mannose 4,6-dehydra 71.0 5.1 0.00018 32.7 4.8 31 4-35 2-33 (372)
455 3d1c_A Flavin-containing putat 71.0 4.7 0.00016 32.7 4.6 34 1-35 2-36 (369)
456 3fbs_A Oxidoreductase; structu 70.8 5.6 0.00019 31.0 4.9 33 1-35 1-33 (297)
457 3hhp_A Malate dehydrogenase; M 70.7 4.7 0.00016 33.5 4.5 22 4-25 1-23 (312)
458 2pk3_A GDP-6-deoxy-D-LYXO-4-he 70.1 5.7 0.00019 31.7 4.8 32 3-35 12-44 (321)
459 4ffl_A PYLC; amino acid, biosy 70.0 6 0.0002 32.7 5.1 31 4-35 2-32 (363)
460 1yvv_A Amine oxidase, flavin-c 69.9 4.6 0.00016 32.4 4.2 31 3-34 2-32 (336)
461 2vou_A 2,6-dihydroxypyridine h 69.9 5.8 0.0002 33.0 5.0 31 3-34 5-35 (397)
462 4gx0_A TRKA domain protein; me 69.8 4.4 0.00015 35.9 4.4 31 4-35 349-379 (565)
463 1yo6_A Putative carbonyl reduc 69.6 6.5 0.00022 30.0 4.9 35 1-35 1-37 (250)
464 2jl1_A Triphenylmethane reduct 69.2 3.2 0.00011 32.6 3.1 31 5-35 2-34 (287)
465 2zcu_A Uncharacterized oxidore 69.2 4.2 0.00014 31.8 3.8 31 5-35 1-33 (286)
466 3phh_A Shikimate dehydrogenase 68.9 8.5 0.00029 31.2 5.6 32 4-36 119-150 (269)
467 1vl0_A DTDP-4-dehydrorhamnose 68.8 5.4 0.00018 31.4 4.4 32 3-35 12-44 (292)
468 1eq2_A ADP-L-glycero-D-mannohe 68.7 6 0.0002 31.2 4.7 32 5-36 1-33 (310)
469 2xxj_A L-LDH, L-lactate dehydr 68.7 6.2 0.00021 32.5 4.8 33 4-36 1-33 (310)
470 3vtf_A UDP-glucose 6-dehydroge 68.4 4.6 0.00016 35.3 4.1 40 3-46 21-60 (444)
471 2p5y_A UDP-glucose 4-epimerase 68.4 6.4 0.00022 31.3 4.8 30 5-35 2-32 (311)
472 3fr7_A Putative ketol-acid red 68.2 6.3 0.00021 35.3 5.0 32 4-35 55-91 (525)
473 1hye_A L-lactate/malate dehydr 68.2 6.2 0.00021 32.4 4.7 29 5-33 2-32 (313)
474 1c0p_A D-amino acid oxidase; a 68.1 7.7 0.00026 31.6 5.3 32 3-35 6-37 (363)
475 4a0s_A Octenoyl-COA reductase/ 68.0 11 0.00038 32.1 6.5 39 4-46 222-261 (447)
476 1pjc_A Protein (L-alanine dehy 67.8 6.6 0.00022 32.9 4.9 31 4-35 168-198 (361)
477 3d7l_A LIN1944 protein; APC893 67.8 7.2 0.00025 28.9 4.7 30 4-35 4-34 (202)
478 4eez_A Alcohol dehydrogenase 1 67.6 3.2 0.00011 34.0 2.9 32 4-35 165-196 (348)
479 2gv8_A Monooxygenase; FMO, FAD 67.5 7.2 0.00024 33.2 5.2 31 3-34 6-38 (447)
480 1i24_A Sulfolipid biosynthesis 67.1 6.3 0.00022 32.5 4.6 32 3-35 11-43 (404)
481 3alj_A 2-methyl-3-hydroxypyrid 67.1 6.6 0.00022 32.4 4.7 31 3-34 11-41 (379)
482 3kd9_A Coenzyme A disulfide re 67.0 5.5 0.00019 33.9 4.3 35 1-35 1-36 (449)
483 4dim_A Phosphoribosylglycinami 67.0 4.9 0.00017 33.6 4.0 33 2-35 6-38 (403)
484 1n2s_A DTDP-4-, DTDP-glucose o 66.7 5.3 0.00018 31.5 3.9 29 5-35 2-31 (299)
485 1x7d_A Ornithine cyclodeaminas 66.7 5.8 0.0002 33.3 4.3 33 4-36 130-162 (350)
486 1o6z_A MDH, malate dehydrogena 66.4 7.4 0.00025 31.8 4.8 32 4-36 1-34 (303)
487 4a7p_A UDP-glucose dehydrogena 66.2 6.4 0.00022 34.3 4.6 32 3-35 8-39 (446)
488 2cul_A Glucose-inhibited divis 66.2 7.3 0.00025 30.0 4.6 34 1-35 1-34 (232)
489 1smk_A Malate dehydrogenase, g 66.2 5.9 0.0002 32.8 4.2 31 3-33 8-40 (326)
490 2r85_A PURP protein PF1517; AT 66.0 5.7 0.0002 32.0 4.1 32 2-35 1-32 (334)
491 3ihm_A Styrene monooxygenase A 66.0 5.9 0.0002 33.6 4.3 31 4-35 23-53 (430)
492 1mld_A Malate dehydrogenase; o 65.6 5.7 0.0002 32.7 4.0 30 4-33 1-32 (314)
493 1wdk_A Fatty oxidation complex 65.6 4.5 0.00015 37.4 3.6 31 3-34 314-344 (715)
494 3hdj_A Probable ornithine cycl 65.6 7.6 0.00026 32.1 4.8 33 4-37 122-155 (313)
495 2i6t_A Ubiquitin-conjugating e 65.3 6.4 0.00022 32.4 4.2 32 4-36 15-47 (303)
496 3pi7_A NADH oxidoreductase; gr 65.2 12 0.0004 30.8 5.9 30 5-35 167-197 (349)
497 3cgv_A Geranylgeranyl reductas 65.1 5.2 0.00018 32.8 3.7 34 1-35 2-35 (397)
498 4hv4_A UDP-N-acetylmuramate--L 65.0 23 0.00077 30.9 8.0 31 4-36 23-54 (494)
499 1qor_A Quinone oxidoreductase; 64.7 7.9 0.00027 31.4 4.7 31 4-35 142-173 (327)
500 1nyt_A Shikimate 5-dehydrogena 64.7 8.8 0.0003 30.6 4.9 31 4-35 120-150 (271)
No 1
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=3.2e-71 Score=472.72 Aligned_cols=183 Identities=57% Similarity=1.002 Sum_probs=177.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||+++|++++++++++|+|||++.|+++++|||||||+||+|+ ++++.+ ++.|.+||++|++++++|
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~e~d 79 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYA-GEVSHD-DKHIIVDGKKIATYQERD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEC-SSEEEETTEEEEEECCSS
T ss_pred eEEEEECCCcHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCC-CcEEEc-CCEEEECCEEEEEEeecc
Confidence 799999999999999999999989999999999889999999999999999999 899985 456999999999999999
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCCCCcEEEcCChhhHhHHHHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLAPLA 163 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la~~l 163 (188)
|+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||+|++
T Consensus 80 p~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~Lap~l 159 (332)
T 3pym_A 80 PANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLA 159 (332)
T ss_dssp GGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHHHHH
T ss_pred cccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCCCCCeEeeccchhhcCccccEEecCcchhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987899999999999999999
Q ss_pred HHHHHhcCceEEEEEEEeeccCCCC
Q 029788 164 KVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 164 k~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|+||++|||++++||||||+|++|.
T Consensus 160 kvL~d~fGI~~g~mTTvha~T~~Q~ 184 (332)
T 3pym_A 160 KVINDAFGIEEGLMTTVHSLTATQK 184 (332)
T ss_dssp HHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHhcCeEEEEEEEEeeccccch
Confidence 9999999999999999999999993
No 2
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.5e-71 Score=475.57 Aligned_cols=186 Identities=84% Similarity=1.348 Sum_probs=178.8
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheecccccccccc-ceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHH-ELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~-~v~~~~~~~l~i~g~~i~v~ 79 (188)
|.++||||||||||||+++|++++++++++|+|||++.|+++++|||||||+||+|+ + +++.++++.|.+||++|+++
T Consensus 1 m~~~kv~INGfGrIGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~-~~~v~~~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWK-HSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTSCHHHHHHHHHCCTTTCCCC-SSCEEEEETTEEEETTEEEEEE
T ss_pred CCceEEEEECCChHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhhhccCCCccc-CceEEEcCCcEEEECCEEEEEE
Confidence 666899999999999999999999989999999999889999999999999999999 8 89987653699999999999
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCCCCcEEEcCChhhHhH
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCL 159 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~l 159 (188)
+++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++|+||||||||++.|+++++||||||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~p~vV~gVN~~~~~~~~~IISnasCTTn~L 159 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCL 159 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeECCCCCHHHcCCCCcEEecCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998789999999999999
Q ss_pred HHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 160 APLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 160 a~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
+|++|+||++|||++++||||||+|++|
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvha~T~~q 187 (337)
T 3v1y_O 160 APLAKVIHDNFGIIEGLMTTVHAITATQ 187 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTS
T ss_pred HHHHHHHHHhcCeEEEEEeeeeeccchh
Confidence 9999999999999999999999999998
No 3
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=2.3e-70 Score=468.09 Aligned_cols=183 Identities=46% Similarity=0.766 Sum_probs=175.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||+++|++++++++++|+||| +.++++++|||||||+||+|+ ++++.++ +.|.+||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~R~~~~~~~~~ivaind-~~d~~~~a~l~kyDS~hG~f~-~~v~~~~-~~l~inGk~I~v~~e~ 80 (338)
T 3lvf_P 4 AVKVAINGFGRIGRLAFRRIQEVEGLEVVAVND-LTDDDMLAHLLKYDTMQGRFT-GEVEVVD-GGFRVNGKEVKSFSEP 80 (338)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEEC-SSCHHHHHHHHHCCTTTCCCS-SCEEEET-TEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHHCCCceEEEEec-CCCHHHHHHHhccCCCCCCcC-CeEEEcC-CEEEECCEEEEEEEec
Confidence 489999999999999999999998999999999 579999999999999999999 8999864 5699999999999999
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCcCCCCcEEEcCChhhHhHHH
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKPELNIVSNASCTTNCLAP 161 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la~ 161 (188)
||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++.++||||||||||||+|
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~IISNasCTTn~Lap 160 (338)
T 3lvf_P 81 DASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAP 160 (338)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCSCCSEEECCCHHHHHHHH
T ss_pred ccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCCCCCEEeccCCHHHcCccCCeEecCchhhhhhHH
Confidence 9999999999999999999999999999999999999999999997 699999999999999878999999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 162 LAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 162 ~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
++||||++|||++++||||||+|++|.
T Consensus 161 ~lkvL~d~fGI~~g~mTTvha~T~~q~ 187 (338)
T 3lvf_P 161 VAKVLNDDFGLVEGLMTTIHAYTGDQN 187 (338)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHhcCEEEEEEeeeccccchhh
Confidence 999999999999999999999999983
No 4
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=4.4e-70 Score=466.21 Aligned_cols=184 Identities=46% Similarity=0.794 Sum_probs=175.6
Q ss_pred CcceEEEEccCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||||||||||+++|+++++ +++++|+|||+ .++++++|||||||+||+|+ ++++.+ ++.|.+||++|+++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~-~d~~~~a~l~kyDS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~ 77 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDL-GPVETNAHLLRYDSVHGRFP-KEVEVA-GDTIDVGYGPIKVH 77 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCCEEC-SSEEESSSSEEEEE
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCC-CCHHHHHHHhcccCCCCCCC-CeEEEe-cCEEEECCEEEEEE
Confidence 248999999999999999999987 68999999998 69999999999999999999 899985 55699999999999
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCCCCcEEEcCChhhHh
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNC 158 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~~~~ivs~~sCtT~~ 158 (188)
+++||+++||++.|+|||+||||.|+++|+++.|+++||||||||+|++| +||||||||++.|+++++|||||||||||
T Consensus 78 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d~~p~vV~gVN~~~~~~~~~IISNasCTTn~ 157 (335)
T 3doc_A 78 AVRNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADGADLTVVYGVNNDKLTKDHLVISNASCTTNC 157 (335)
T ss_dssp CCSSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTTCSEECCTTTTGGGCCTTCCEEECCCHHHHH
T ss_pred eecccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCCCCCEEecccCHHHhCccCCeEecCchhhhh
Confidence 99999999999999999999999999999999999999999999999987 79999999999998878999999999999
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 159 LAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 159 la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|+|++|+||++|||++++||||||+|++|.
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~ 187 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQP 187 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhh
Confidence 999999999999999999999999999983
No 5
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=1.2e-69 Score=464.41 Aligned_cols=183 Identities=44% Similarity=0.788 Sum_probs=171.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
|+||||||||||||+++|++++++++++|+|||+ .++++++|||||||+||+|+ ++++.+ ++.|.|||++|++++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~~~~~ivaINd~-~d~~~~a~llkyDS~hG~f~-~~v~~~-~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKESAFEIVAINAS-YPSETLAHLIKYDTVHGKFD-GTVEAF-EDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTCSSSEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEC-SSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhCCCceEEEEcCC-CCHHHHHHHhcccCCCCCCC-CcEEEc-CCEEEECCEEEEEeecC
Confidence 4899999999999999999999989999999998 69999999999999999999 899985 55699999999999999
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCcCC-CCcEEEcCChhhHhHH
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKP-ELNIVSNASCTTNCLA 160 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-d~p~~V~gvN~~~~~~-~~~ivs~~sCtT~~la 160 (188)
||+++||++.|+||||||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ .++||||||||||||+
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~La 160 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKNEDVTIVVGVNEDQLDITKHTVISNASCTTNCLA 160 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCSEEECCCHHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHcCcccCeEEECCchhhhhhH
Confidence 9999999999999999999999999999999999999999999997 5899999999999987 6899999999999999
Q ss_pred HHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|++|+||++|||++++||||||+|++|.
T Consensus 161 p~lkvL~d~fGI~~g~mTTvhA~T~~Q~ 188 (345)
T 4dib_A 161 PVVKVLDEQFGIENGLMTTVHAYTNDQK 188 (345)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECC-----
T ss_pred HHHHHHHHhcCeEEEEEEeeeeccCCce
Confidence 9999999999999999999999999983
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=2.9e-69 Score=462.90 Aligned_cols=183 Identities=58% Similarity=1.047 Sum_probs=176.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||+++|++++++ +++|+|||++.++++++|||||||+||+|+ ++++.+ |+.|.+||++|+|++++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~~-veivainDp~~d~~~~a~l~~yDS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~e~ 83 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEKG-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYK-GSVEFR-NGQLVVDNHEISVYQCK 83 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEETTEEEEEECCS
T ss_pred eeEEEEECCChHHHHHHHHHHhCC-CEEEEEeCCCCChhHhcccccccCCCCCCC-CcEEEc-CCEEEECCEEEEEEecC
Confidence 589999999999999999999986 999999999899999999999999999999 899985 45699999999999999
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCC-CCcEEEcCChhhHhHHH
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~-~~~ivs~~sCtT~~la~ 161 (188)
+|++++|++.|+||||||||.|+++|+++.|+++||||||||+|++|+||||||||++.|++ +++||||||||||||+|
T Consensus 84 dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~d~plvV~gVN~~~~~~~~~~IISNasCTTn~Lap 163 (346)
T 3h9e_O 84 EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNPGSMNIVSNASCTTNCLAP 163 (346)
T ss_dssp SGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTTCSEEECCCHHHHHHHH
T ss_pred ChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCeeCcccCHHHcCcccCCEEECCcchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 78999999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 162 LAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 162 ~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
++|+||++|||++++||||||+|++|.
T Consensus 164 ~lkvL~d~fGI~~g~mTTvhA~T~tQ~ 190 (346)
T 3h9e_O 164 LAKVIHERFGIVEGLMTTVHSYTATQK 190 (346)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHhCeeEEEEeeeeeccCccc
Confidence 999999999999999999999999993
No 7
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=1.1e-69 Score=466.59 Aligned_cols=185 Identities=49% Similarity=0.885 Sum_probs=176.0
Q ss_pred cceEEEEccCHHHHHHHHH----HHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEe-------CCCceEE
Q 029788 3 KVKIGINGFGRIGRLVARV----ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLF 71 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~----l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~-------~~~~l~i 71 (188)
++||||||||||||+++|+ +++++++++|+|||++.|+++++|||||||+||+|+ ++++.. +++.|.|
T Consensus 2 ~~kv~INGFGrIGr~v~Ra~~~~~~~~~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~-~~v~~~~~~~~~~~~~~l~i 80 (359)
T 3ids_C 2 PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFK-YEVTTTKSSPSVAKDDTLVV 80 (359)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHTTCBTTTEEEEEEECSSCCHHHHHHHHHEETTTEECS-SCEEEECSCTTSSSCCEEEE
T ss_pred ceEEEEECCChHHHHHHHHhHHHHhcCCCcEEEEEecCCCCHHHHHHHhcccCCCCCEe-eEEEecccccccCCCCEEEE
Confidence 4899999999999999999 778888999999998889999999999999999999 899882 4567999
Q ss_pred CCEEEEEEe-ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-CCCeEEeecCccCcCC-CCcE
Q 029788 72 GEKPVTVFG-VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAPMFVVGVNEHEYKP-ELNI 148 (188)
Q Consensus 72 ~g~~i~v~~-~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-d~p~~V~gvN~~~~~~-~~~i 148 (188)
||++|++++ +++|+++||++.|+||||||||.|+++|+++.|+++||||||||+|++ |+||||||||++.|++ .++|
T Consensus 81 nGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~d~p~vV~gVN~~~~~~~~~~I 160 (359)
T 3ids_C 81 NGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHV 160 (359)
T ss_dssp TTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBSSCEECCTTTTGGGCCTTTCSE
T ss_pred CCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCCCCCeEEeccCHHHcCCCCCCE
Confidence 999999998 899999999999999999999999999999999999999999999997 6999999999999997 7899
Q ss_pred EEcCChhhHhHHHHHHHH-HHhcCceEEEEEEEeeccCCCC
Q 029788 149 VSNASCTTNCLAPLAKVI-HDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 149 vs~~sCtT~~la~~lk~l-~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|||||||||||+|++|+| |++|||++++||||||+|++|.
T Consensus 161 ISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~ 201 (359)
T 3ids_C 161 VSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQK 201 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSB
T ss_pred EECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhh
Confidence 999999999999999999 9999999999999999999983
No 8
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=1.4e-66 Score=447.13 Aligned_cols=186 Identities=59% Similarity=0.982 Sum_probs=176.1
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|..+||||||||||||+++|+++++++||+|+|||+..++++++|||+|||+||+|+ ++++++ ++.|.++|++|++++
T Consensus 9 ~~~~kv~INGfGrIGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~-~~v~~~-~~~l~v~Gk~i~v~~ 86 (345)
T 2b4r_O 9 MAATKLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFP-CEVTHA-DGFLLIGEKKVSVFA 86 (345)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEESSCEEEEEC
T ss_pred hhheEEEEeCCchHHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCC-CCEEEc-CCEEEECCEEEEEEE
Confidence 556899999999999999999999999999999997789999999999999999999 899986 456999999999999
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCCCCcEEEcCChhhHhH
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNCL 159 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~~~~ivs~~sCtT~~l 159 (188)
++||++++|++.|+||||||||.|+++++++.|+++||||||||+|+++ +||||||||++.|++.++||||||||||||
T Consensus 87 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~dvplvV~gVN~~~~~~~~~IISNasCTTn~L 166 (345)
T 2b4r_O 87 EKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCL 166 (345)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCCTTCCEEECCCHHHHHH
T ss_pred cCCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCCCCCEEEecCCHHHhCCCCCEEECCchHHHHH
Confidence 9999999999889999999999999999999999999999999999986 899999999999987678999999999999
Q ss_pred HHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 160 APLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 160 a~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
+|++|+||++|||+++.||||||+|++|.
T Consensus 167 ap~lk~L~d~fGI~~~~mTTvhA~T~~q~ 195 (345)
T 2b4r_O 167 APLAKVINDRFGIVEGLMTTVHASTANQL 195 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECCCTTSC
T ss_pred HHHHHHHHHhcCeeEEEEEEeehhhchhh
Confidence 99999999999999999999999999984
No 9
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=5.2e-67 Score=449.59 Aligned_cols=182 Identities=45% Similarity=0.820 Sum_probs=173.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||.++|+++++ +|++|+|||+ .++++++|||||||+||+|+ ++++.+ |+.|.+||++|++++++
T Consensus 21 ~~kVaInGfGrIGr~vlr~l~e~-~~~ivaIndl-~d~~~~a~llkydS~hG~f~-~~v~~~-~~~l~i~Gk~I~v~~~~ 96 (356)
T 3hja_A 21 SMKLAINGFGRIGRNVFKIAFER-GIDIVAINDL-TDPKTLAHLLKYDSTFGVYN-KKVESR-DGAIVVDGREIKIIAER 96 (356)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEE-TTEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCHHHhhhhhccccCCCCCC-CCEEEc-CCEEEECCEEEEEEEcC
Confidence 58999999999999999999999 7999999998 69999999999999999999 888875 45699999999999999
Q ss_pred CCCCCCCcCCCccEEEeecCCccC----HhhHHHHHh-CCCcEEEEeCCCCC-CCeEEeecCccCcCCCCcEEEcCChhh
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLK-GGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTT 156 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~----~~~~~~~l~-aGak~vvis~ps~d-~p~~V~gvN~~~~~~~~~ivs~~sCtT 156 (188)
||+++||++.|+|||+||||.|++ +|+++.|++ +||||||||+|++| +||||||||++.|+++++|||||||||
T Consensus 97 dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d~vp~vV~gVN~~~~~~~~~IISNaSCTT 176 (356)
T 3hja_A 97 DPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDLKAVSNASCTT 176 (356)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSSCCEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred ChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCCCCCEEeccCCHHHcCcCccEEECCccch
Confidence 999999999999999999999999 999999999 99999999999987 699999999999998789999999999
Q ss_pred HhHHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 157 ~~la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|||+|++|+||++|||++++||||||+|++|.
T Consensus 177 n~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~ 208 (356)
T 3hja_A 177 NCLAPLAKVLHESFGIEQGLMTTVHAYTNDQR 208 (356)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred hhhhHhHHHHHHhcCeEEEEEEEEEecccccc
Confidence 99999999999999999999999999999983
No 10
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=1.5e-65 Score=439.72 Aligned_cols=182 Identities=44% Similarity=0.728 Sum_probs=174.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcC---CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~---~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||||||||||+++|+++++ ++|++|+|||+ .++++++|||+|||+||+|+ ++++++ |+.|.++|++|++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~-~~~~~~a~ll~ydS~hg~f~-~~v~~~-~~~l~v~g~~i~v~~ 78 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFP-GTVSVN-GSYMVVNGDKIRVDA 78 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEE-TTEEEETTEEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCC-CCHHHHHHHhccCCcCCCCC-CCEEEe-CCEEEECCEEEEEEE
Confidence 6999999999999999999998 89999999996 79999999999999999999 899986 556999999999999
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-CCC-eEEeecCccCcCCCCcEEEcCChhhHh
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DAP-MFVVGVNEHEYKPELNIVSNASCTTNC 158 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-d~p-~~V~gvN~~~~~~~~~ivs~~sCtT~~ 158 (188)
++||++++|++.|+|+||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++.++|||||||||||
T Consensus 79 ~~dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~dvp~~vV~gVN~~~~~~~~~IISNasCTTn~ 158 (335)
T 1obf_O 79 NRNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGADVDATVVYGVNHGTLKSTDTVISNASCTTNC 158 (335)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHHHH
T ss_pred cCCcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccCCCCceEEccCCHHHhCcCccEEeCCcHHHHH
Confidence 999999999999999999999999999999999999999999999997 799 999999999998767899999999999
Q ss_pred HHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 159 LAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 159 la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|+|++|+||++|||++++||||||+|++|.
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~ 188 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQV 188 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhh
Confidence 999999999999999999999999999984
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-65 Score=440.96 Aligned_cols=183 Identities=49% Similarity=0.881 Sum_probs=174.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||||||||||+++|+++++++|++|+|||+ .++++++|||+|||+||+|+ ++++++ ++.|.++|++|++++++
T Consensus 2 ~ikV~InGfGrIGr~v~r~l~~~~~~evvaInd~-~~~~~~a~ll~yDs~hG~~~-~~v~~~-~~~l~v~Gk~i~v~~~~ 78 (342)
T 2ep7_A 2 AIKVGINGFGRIGRSFFRASWGREEIEIVAINDL-TDAKHLAHLLKYDSVHGIFK-GSVEAK-DDSIVVDGKEIKVFAQK 78 (342)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTCTTCEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEC-SSEEEETTEEEEEECCS
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecC-CChHHHhhhhhcccccccCC-CcEEEc-CCEEEECCEEEEEEEcC
Confidence 4799999999999999999999999999999995 69999999999999999999 899985 55699999999999989
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCC-eEEeecCccCcCC-CCcEEEcCChhhHhHH
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNEHEYKP-ELNIVSNASCTTNCLA 160 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p-~~V~gvN~~~~~~-~~~ivs~~sCtT~~la 160 (188)
+|++++|++.|+|+||||||.|+++++++.|+++||||||||+|++|+| |||||||++.|++ .++||||||||||||+
T Consensus 79 dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~dvp~~vV~gVN~~~~~~~~~~IISNasCTTn~La 158 (342)
T 2ep7_A 79 DPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLA 158 (342)
T ss_dssp SGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred ChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCCCCCceEEcCcCHHHhcccCCeEEECCChHHHHHH
Confidence 9999999988999999999999999999999999999999999999999 9999999999997 5789999999999999
Q ss_pred HHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|++|+||++|||+++.||||||+|++|.
T Consensus 159 p~lk~L~d~fGI~~~~mTTvha~T~~q~ 186 (342)
T 2ep7_A 159 PCVKVLNEAFGVEKGYMVTVHAYTNDQR 186 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSB
T ss_pred HHHHHHHHHcCeeEEEEEEEeecccchh
Confidence 9999999999999999999999999983
No 12
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=2.2e-59 Score=401.99 Aligned_cols=180 Identities=51% Similarity=0.815 Sum_probs=171.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||.++|+|+++ +|++++|||+ .++++++|||+|||+||+|. ++++++ ++.|.++|+.|++++++|
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~-~~evvaind~-~~~~~~a~ll~~ds~~G~~~-~~v~~~-~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR-GVEVALINDL-TDNKTLAHLLKYDSIYHRFP-GEVAYD-DQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEC-SSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCEEEEEecC-CCHHHHhHhhhccccCCCCC-ceEEEc-CCEEEECCEEEEEEecCC
Confidence 4899999999999999999998 8999999995 69999999999999999999 888875 456999999999998889
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCC-CCcEEEcCChhhHhHHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~-~~~ivs~~sCtT~~la~ 161 (188)
|++++|++.++|+||||||.|.+++.++.|+++||||||||+|++| +|++|||||++.|++ .++||||||||||||+|
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~lap 156 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAP 156 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcCCCCEEeeccCHHHhCcCCCCEEECCChHHHHHHH
Confidence 9999999889999999999999999999999999999999999987 799999999999986 47899999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 162 LAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 162 ~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
++||||++|||+++.|||+||+|++|
T Consensus 157 ~lk~L~~~fgI~~~~mtTvha~Tg~q 182 (331)
T 2g82_O 157 VMKVLEEAFGVEKALMTTVHSYTNDQ 182 (331)
T ss_dssp HHHHHHHHTCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHhcCccEEEEEEEeeccccc
Confidence 99999999999999999999999998
No 13
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=8.3e-59 Score=403.94 Aligned_cols=183 Identities=43% Similarity=0.772 Sum_probs=173.0
Q ss_pred CcceEEEEccCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||||||||||.++|+|+++ |++++|+|||+ .++++++|||+|||+||+|. +++++++ +.|.++|+.|.++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~-~d~~~~a~ll~yds~~G~~~-~~v~~~~-~~l~v~g~~i~v~ 77 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDE-NSITVNGKTMKIV 77 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEET-TEEEETTEEEEEE
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecC-CCHHHHHHhhcccccCCCCC-CcEEEeC-CeEEECCeEEEEE
Confidence 148999999999999999999998 89999999996 69999999999999999999 8898854 4699999999999
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CC-eEEeecCccCcCC-CCcEEEcCChhh
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNEHEYKP-ELNIVSNASCTT 156 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p-~~V~gvN~~~~~~-~~~ivs~~sCtT 156 (188)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +| ++|||||++.|++ +++|||||||||
T Consensus 78 ~~~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d~~p~~~V~GVN~e~~~~~~~~IVSNasCtT 157 (380)
T 2d2i_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKAEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (380)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCCCCCceEEcccCHHHhcccCCcEEECCchHH
Confidence 99999999998789999999999999999999999999999999999987 78 9999999999987 478999999999
Q ss_pred HhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 157 ~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|||+|++||||++|||++++|||+||+|++|
T Consensus 158 n~lap~lk~L~d~fgI~~g~mTTvha~Tg~q 188 (380)
T 2d2i_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQ 188 (380)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHhcCeeEEEEEEEeeccccc
Confidence 9999999999999999999999999999998
No 14
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.2e-57 Score=392.45 Aligned_cols=183 Identities=43% Similarity=0.773 Sum_probs=172.9
Q ss_pred CcceEEEEccCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||||||||||.++|+|.++ |+|++++|||+ .++++++|||+|||+||+|. +++++++ +.|.++|+.+.++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~-~~~~~~~~l~~~ds~~G~~~-~~v~~~~-~~l~v~g~~i~v~ 77 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNT-SDARTAAHLLEYDSVLGRFN-ADISYDE-NSITVNGKTMKIV 77 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECS-SCHHHHHHHHHCCTTTCCCC-SCEEEET-TEEEETTEEEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecC-CCHHHHHHHhccccccCCCC-CcEEEcC-CeeeecCceEEEE
Confidence 148999999999999999999998 89999999996 69999999999999999999 8888854 4699999999999
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CC-eEEeecCccCcCC-CCcEEEcCChhh
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-AP-MFVVGVNEHEYKP-ELNIVSNASCTT 156 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p-~~V~gvN~~~~~~-~~~ivs~~sCtT 156 (188)
+++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +| ++|||||++.|++ .++|||||||||
T Consensus 78 ~~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~~~p~~~V~gVN~~~~~~~~~~IISnasCtT 157 (339)
T 3b1j_A 78 CDRNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKGEGVGTYVIGVNDSEYRHEDFAVISNASCTT 157 (339)
T ss_dssp CCSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSSCEECCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCCCCCeeEEcccCHHHhCcCCCeEEECCcchh
Confidence 99999999999889999999999999999999999999999999999987 78 9999999999987 478999999999
Q ss_pred HhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 157 ~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|||+|++||||++|||++++|||+||+|++|
T Consensus 158 n~lap~lk~L~~~fgI~~~~~tTvha~Tg~q 188 (339)
T 3b1j_A 158 NCLAPVAKVLHDNFGIIKGTMTTTHSYTLDQ 188 (339)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTS
T ss_pred hHHHHHHHHHHHhCCeeEEEEEEEEeecCCc
Confidence 9999999999999999999999999999998
No 15
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=7.3e-58 Score=393.26 Aligned_cols=183 Identities=46% Similarity=0.792 Sum_probs=172.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+||||||||||||.++|+|+++ |++|+++|||. .++++++|||+|||+||+|. +++.+.+++.|.++|+.+.++++
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~-~~~~~~a~ll~sds~~G~~~-~~v~~~~~~~l~v~g~~i~v~~~ 79 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDT-GGVKQASHLLKYDSILGTFD-ADVKTAGDSAISVDGKVIKVVSD 79 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECT-TCHHHHHHHHHCCTTTCSCS-SCEEECTTSEEEETTEEEEEECC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcC-CCHHHHHHHhcccccCCCcc-ceeEEecCCeEEECCeEEEEEec
Confidence 7999999999999999999999 89999999995 79999999999999999999 88883345569999999999999
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCCCCcEEEcCChhhHhHH
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la 160 (188)
+||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++| +|++|||||++.|++.++||||||||||||+
T Consensus 80 ~dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~d~p~~V~GVN~~~~~~~~~IIsNasCtTn~la 159 (337)
T 1rm4_O 80 RNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLA 159 (337)
T ss_dssp SCGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBSSCCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred CChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccCCCCeEeecCCHHHhCCCCeEEECCChHHHHHH
Confidence 999999998889999999999999999999999999999999999876 7999999999999866789999999999999
Q ss_pred HHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
|++||||++|||+++.|||+||+|++|.
T Consensus 160 p~lk~L~~~fgI~~~~mtTvha~Tgaq~ 187 (337)
T 1rm4_O 160 PFVKVLDQKFGIIKGTMTTTHSYTGDQR 187 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHhcCeeEEEEEEEEecCCccc
Confidence 9999999999999999999999999984
No 16
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=7.5e-58 Score=395.31 Aligned_cols=185 Identities=61% Similarity=1.034 Sum_probs=172.8
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+|+||||||||||||.++|+|+++|+|||++|||+..++++++|||+|||+||+|. +.++++ ++.|.++|+.+.++++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~-~~v~~~-~~~l~v~g~~i~v~~~ 93 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFN-GTVEVS-GKDLCINGKVVKVFQA 93 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCS-SCEEEC-C-CEEETTEEEEEECC
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCC-CcEEEe-CCEEEECCeEEEEEec
Confidence 45899999999999999999999999999999996679999999999999999999 888885 4569999999999998
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCCC-CcEEEcCChhhHhH
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPE-LNIVSNASCTTNCL 159 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~~-~~ivs~~sCtT~~l 159 (188)
+||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +|++|||||++.|++. .+||||||||||||
T Consensus 94 ~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd~~p~~V~GVN~~~~~~~~~~IISNpsCtTn~l 173 (354)
T 3cps_A 94 KDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKDNVPMYVMGVNNTEYDPSKFNVISNASCTTNCL 173 (354)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSCCCBCCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred CChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCCCCCEEEeccCHHHhCcCCCcEEECCCcHHHHH
Confidence 999999998779999999999999999999999999999999999986 7999999999999863 78999999999999
Q ss_pred HHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 160 APLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 160 a~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
+|++|||+++|||+++.|||+||+|++|.
T Consensus 174 ap~lkpL~~~~gI~~g~mtTvha~Tg~q~ 202 (354)
T 3cps_A 174 APLAKIINDKFGIVEGLMTTVHSLTANQL 202 (354)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECCTTSC
T ss_pred HHHHHHHHHhCCeeEEEEEEEecccccch
Confidence 99999999999999999999999999973
No 17
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=3.8e-57 Score=388.72 Aligned_cols=181 Identities=54% Similarity=0.878 Sum_probs=172.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||.++|+|.++|++++++||+. .++++++|||+|||+||+|. ++++++ ++.|.++|+.+.+++++|
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~-~~~~~~~~ll~~ds~~G~~~-~~v~~~-~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDL-TDANTLAHLLKYDSVHGRLD-AEVSVN-GNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECS-SCHHHHHHHHHEETTTEECS-SCEEEE-TTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC-CCHHHHHHHhccCCcCCCcC-ceEEEc-cCcEEECCEEEEEEecCC
Confidence 799999999999999999999999999999995 69999999999999999999 888875 446999999999998889
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCC-CCcEEEcCChhhHhHHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKP-ELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~-~~~ivs~~sCtT~~la~ 161 (188)
|++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++| +|++|||||++.|++ ..+||||||||||||+|
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~lap 158 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAP 158 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCHHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCccCCCEeccccCHHHhCccCCeEEECCChHHHHHHH
Confidence 9999999889999999999999999999999999999999999987 799999999999986 37899999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 162 LAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 162 ~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
++||||++|||+++.|||+||+|++|
T Consensus 159 ~lkpL~~~~gI~~~~mtTvha~Sg~q 184 (334)
T 3cmc_O 159 FAKVLHEQFGIVRGMMTTVHSYTNDQ 184 (334)
T ss_dssp HHHHHHHHHCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHhcCceeeeEEEEEeccchh
Confidence 99999999999999999999999998
No 18
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=1.7e-56 Score=385.19 Aligned_cols=187 Identities=84% Similarity=1.340 Sum_probs=171.8
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
||++||||||||||||.++|+|.++|++|+++|||+..++++++|||+|||+||+|.++.+++.+++.|.++|+.+.+++
T Consensus 1 mm~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~ 80 (337)
T 3e5r_O 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFG 80 (337)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEEC
T ss_pred CCceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEe
Confidence 66689999999999999999999999999999999656999999999999999998612454412446999999999998
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCCCCcEEEcCChhhHhHH
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la 160 (188)
++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|++|+|++|||||++.|++.++||||||||||||+
T Consensus 81 ~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~d~p~~V~gvN~~~~~~~~~iIsnpsCtt~~la 160 (337)
T 3e5r_O 81 IRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLA 160 (337)
T ss_dssp CSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCBCCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred cCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCCCCCEEEeccCHHHhCCCCcEEECCChHHHHHH
Confidence 88999999987799999999999999999999999999999999999999999999999999865789999999999999
Q ss_pred HHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|++|||+++|||+++.|||+||+|++|
T Consensus 161 ~~lkpL~~~~gI~~~~~ttvha~Tg~q 187 (337)
T 3e5r_O 161 PLAKVIHDNFGIIEGLMTTVHAITATQ 187 (337)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHhcCccccceeEEEeecccc
Confidence 999999999999999999999999997
No 19
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.9e-56 Score=384.13 Aligned_cols=181 Identities=49% Similarity=0.865 Sum_probs=172.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 4 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+||||||||||||.++|+|.++ |++++++||+. .++++++|||+|||+||+|. ++++++ ++.|.++|+.+.++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~-~~~l~v~g~~i~v~~~ 77 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDL-TDTKTLAHLLKYDSVHKKFP-GKVEYT-ENSLIVDGKEIKVFAE 77 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECS-SCHHHHHHHHHCCTTTCCCS-SCEEEC-SSEEEETTEEEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcC-CChHHhhhhccCcCcCCCcC-CcEEEc-CCEEEECCeEEEEEec
Confidence 4899999999999999999998 99999999995 69999999999999999999 888885 5569999999999988
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCC-eEEeecCccCcCCCCcEEEcCChhhHhHH
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAP-MFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p-~~V~gvN~~~~~~~~~ivs~~sCtT~~la 160 (188)
+||++++|++.++|+||||||.|.+++.++.|+++|+||+|||+|++|+| ++|||||++.|+++++||||||||||||+
T Consensus 78 ~dp~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~d~p~~~V~eVN~~~i~~~~~iIsNpsCttn~la 157 (332)
T 1hdg_O 78 PDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSIA 157 (332)
T ss_dssp SSGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTTGGGCCTTCCEEECCCHHHHHHH
T ss_pred CChHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCCCCCceEEeccCHHHhCCCCcEEECCccHHHHHH
Confidence 89999999888999999999999999999999999999999999998899 99999999999865789999999999999
Q ss_pred HHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|+||||+++|||+++.|||+||+|++|
T Consensus 158 p~lkpL~~~~gI~~~~~ttvha~Sg~q 184 (332)
T 1hdg_O 158 PIVKVLHEKFGIVSGMLTTVHSYTNDQ 184 (332)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHhcCeeEeEEEEEEeccchh
Confidence 999999999999999999999999998
No 20
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=2.4e-56 Score=384.10 Aligned_cols=185 Identities=64% Similarity=1.097 Sum_probs=173.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|||+||||||||||||.++|++.++|++++++|||+..++++++||++|||+||+|. +.++++ ++.|.++|+.+++++
T Consensus 1 mM~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~-~~~~~~-~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFH-GTVKAE-NGKLVINGNPITIFQ 78 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEETTEEEEEEC
T ss_pred CCceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCC-CceEEc-CCeEEECCeEEEEEe
Confidence 677899999999999999999999999999999996468999999999999999999 788875 446999999999998
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCCCCcEEEcCChhhHhHH
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la 160 (188)
++||++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|++|+|++|||||++.|++.++||||||||||||+
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~~~p~~V~gvN~~~~~~~~~iIsnpsCtt~~l~ 158 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLA 158 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGGCCTTCSEEECCCHHHHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCCCCCeEEeccCHHHhCCCCCEEECCChHHHHHH
Confidence 88999999988899999999999999999999999999999999998889999999999999865789999999999999
Q ss_pred HHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|++|||+++|||+++.|||+|++|++|
T Consensus 159 ~~lkpL~~~~gI~~~~~tt~~a~Tg~q 185 (335)
T 1u8f_O 159 PLAKVIHDNFGIVEGLMTTVHAITATQ 185 (335)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHhCCcceeEEEEEeccccCc
Confidence 999999999999999999999999997
No 21
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=8.4e-56 Score=379.93 Aligned_cols=180 Identities=54% Similarity=0.936 Sum_probs=170.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||||||||||.++|+|.++|+++|++||+. .++++++||++|||+||+|. +.++++ ++.|.++|++|++++++|
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~-~~~~~~a~l~~~ds~~g~~~-~~v~~~-~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDL-LDADYMAYMLKYDSTHGRFD-GTVEVK-DGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC-CChhHHhHhhcccccCCCCC-CeEEEc-CCEEEECCEEEEEEEcCC
Confidence 799999999999999999999999999999995 68999999999999999999 888875 446999999999999999
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC-CCeEEeecCccCcCCCCcEEEcCChhhHhHHHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD-APMFVVGVNEHEYKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d-~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la~~ 162 (188)
|++++|++.++|+||||||.|.+++.++.|+++|+|+|++|+|+++ +|++|||||++.|+ ..+||||||||||||+|+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~~~p~~V~GvN~~~~~-~~~iIsNpsCtt~~lap~ 157 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYA-GQDIVSNASCTTNCLAPL 157 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGCC-SCSEEECCCHHHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCCCCCeEeecCCHHHhC-CCCEEEcCChHHHHHHHH
Confidence 9999998889999999999999999999999999999999999864 79999999999998 678999999999999999
Q ss_pred HHHHHHhcCceEEEEEEEeeccCCC
Q 029788 163 AKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 163 lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|||||++|||+++.|||+||+|++|
T Consensus 158 lkpL~~~~gI~~~~~ttvha~Tg~q 182 (330)
T 1gad_O 158 AKVINDNFGIIEGLMTTVHATTATQ 182 (330)
T ss_dssp HHHHHHHHCEEEEEEEEEECCCTTS
T ss_pred HHHHHHhcCeeEEEEEEEEeccccc
Confidence 9999999999999999999999997
No 22
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=1.2e-55 Score=380.10 Aligned_cols=183 Identities=39% Similarity=0.726 Sum_probs=169.2
Q ss_pred CcceEEEEccCHHHHHHHHHHHc---CCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~---~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|++||||||||+|||.++|+|.+ +|++++++||+. .++++++|||+|||+||+|. ++++++ ++.|.++|+.+++
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~-~~~~~~~~ll~~ds~~g~~~-~~v~~~-~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINEL-ADAAGMAHLLKYDTSHGRFA-WEVRQE-RDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECS-SCHHHHHHHHHCCTTTCSCS-SCEEEE-TTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCC-CCHHHHHHHhcccccCCCCC-ceEEEc-CCeeEECCEEEEE
Confidence 24899999999999999999999 889999999996 69999999999999999999 888875 4569999999999
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC-CCCC-eEEeecCccCcCCCCcEEEcCChhh
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAP-MFVVGVNEHEYKPELNIVSNASCTT 156 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps-~d~p-~~V~gvN~~~~~~~~~ivs~~sCtT 156 (188)
++++||++++|++.++|+||||||.|.+++.++.|+++|+||||||+|+ .|+| ++|||||++.|+++.+|||||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad~d~p~~~V~gvN~~~~~~~~~iIsnpsCtt 157 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTT 157 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCCTTSSEECCTTTSGGGCCTTCCEEECCCHHH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEeccccCCCCceeecccCHHHhcCCCCEEECCCcHH
Confidence 9888999999987789999999999999999999999999999999998 6789 9999999999986468999999999
Q ss_pred HhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 157 NCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 157 ~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|||+|++||||++|||+++.|||+||+|++|
T Consensus 158 n~lap~lkpL~~~~gI~~~~~ttvha~Tg~q 188 (339)
T 2x5j_O 158 NCIIPVIKLLDDAYGIESGTVTTIHSAMHDQ 188 (339)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEECCC---
T ss_pred HHHHHHHHHHHHccCcceeeEEEEEeccccc
Confidence 9999999999999999999999999999998
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.1e-46 Score=322.10 Aligned_cols=167 Identities=20% Similarity=0.211 Sum_probs=145.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheec--cccccc--cccce-EEeCCCceEECCEE
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQW--KHHEL-KVKDDKTLLFGEKP 75 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~yd--S~~g~~--~~~~v-~~~~~~~l~i~g~~ 75 (188)
|| +||||||||+|||.++|+|.++|++++++|||. ++++++||++|| |+||+| . +.+ ++++ +.+.+++
T Consensus 1 Mm-ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~--~~~~~~~l~~~dg~s~~g~~~~~-~~v~~~~~-~~l~v~~-- 73 (343)
T 2yyy_A 1 MP-AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKT--KPDFEARLAVEKGYKLFVAIPDN-ERVKLFED-AGIPVEG-- 73 (343)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSCCH-HHHHHHHH-TTCCCCC--
T ss_pred Cc-eEEEEECCCHHHHHHHHHHHhCCCceEEEEecC--CHHHHHHHHHhcCCccccccCCC-ceeecccC-CeEEECC--
Confidence 64 899999999999999999999999999999996 599999999999 999998 4 444 3433 3466664
Q ss_pred EEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHH-HHHhCCCcEEEEeCCCC-C-CC-eEEeecCccCcCCCCcEEEc
Q 029788 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAA-AHLKGGAKKVIISAPSK-D-AP-MFVVGVNEHEYKPELNIVSN 151 (188)
Q Consensus 76 i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~-~~l~aGak~vvis~ps~-d-~p-~~V~gvN~~~~~~~~~ivs~ 151 (188)
+++.+.| ++|+||||||.+.+++.++ .|+++|+ +||+|+|++ | +| +||||||++.|++ ++||||
T Consensus 74 -------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG~-~VI~sap~~~d~vp~~vV~gvN~~~~~~-~~iIsn 141 (343)
T 2yyy_A 74 -------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHKV-KAILQGGEKAKDVEDNFNALWSYNRCYG-KDYVRV 141 (343)
T ss_dssp -------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTTC-EEEECTTSCGGGSSEEECTTTTHHHHTT-CSEEEE
T ss_pred -------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCCC-EEEECCCccccCCCceEEcccCHHHhcc-CCEEec
Confidence 3455556 6999999999999999996 9999994 588888876 5 79 9999999999985 789999
Q ss_pred CChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCC
Q 029788 152 ASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 152 ~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~ 186 (188)
||||||||+|+||+||++|||+++.||||||+|+.
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~ 176 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAADP 176 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc
Confidence 99999999999999999999999999999999973
No 24
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=5e-37 Score=264.06 Aligned_cols=164 Identities=21% Similarity=0.254 Sum_probs=138.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheec--cccccccccce-EEeCCCceEECCEEEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~yd--S~~g~~~~~~v-~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||+|+|+|||.++|+|.++|++++++|++. +++..+++++|+ ++|++|. +.+ .+++. .+.+++
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~l~v~~------- 70 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKT--RPDFEARMALKKGYDLYVAIP-ERVKLFEKA-GIEVAG------- 70 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHT-TCCCCE-------
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcC--ChhHHHHhcCCcchhhccccc-cceeeecCC-ceEEcC-------
Confidence 799999999999999999999999999999997 577888999988 8899887 544 22222 255542
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-CC--CeEEeecCccCcCCCCcEEEcCChhhH
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-DA--PMFVVGVNEHEYKPELNIVSNASCTTN 157 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-d~--p~~V~gvN~~~~~~~~~ivs~~sCtT~ 157 (188)
+++++.| ++|+||+|||.+.+++.++.|+++|++ ||+++|.+ |+ |++|||+|++.++. .++|+||||+||
T Consensus 71 --~~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~~-VId~sp~~~d~~~~~~V~gvN~e~~~~-~~iIanp~C~tt 143 (337)
T 1cf2_P 71 --TVDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGIK-AIFQGGEKHEDIGLSFNSLSNYEESYG-KDYTRVVSCNTT 143 (337)
T ss_dssp --EHHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTCC-EEECTTSCHHHHSCEECHHHHGGGGTT-CSEEEECCHHHH
T ss_pred --CHHHHhc---CCCEEEECCCchhhHHHHHHHHHcCCE-EEEecCCCCccCCCeEEeeeCHHHhcC-CCEEEcCCcHHH
Confidence 1222223 699999999999999999999999975 77777764 34 99999999999985 689999999999
Q ss_pred hHHHHHHHHHHhcCceEEEEEEEeeccC
Q 029788 158 CLAPLAKVIHDKFGIVEGLMTTVHSITG 185 (188)
Q Consensus 158 ~la~~lk~l~~~~gI~~~~vtTvha~s~ 185 (188)
||+|+|+||+++|||+++.|||+||+|+
T Consensus 144 ~l~~~l~pL~~~~gI~~~~vtt~~a~s~ 171 (337)
T 1cf2_P 144 GLCRTLKPLHDSFGIKKVRAVIVRRGAD 171 (337)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHhcCcceeEEEEEEEeec
Confidence 9999999999999999999999999986
No 25
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.7e-34 Score=248.13 Aligned_cols=154 Identities=27% Similarity=0.303 Sum_probs=129.4
Q ss_pred CCcceEEEEc-cCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEE
Q 029788 1 MGKVKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (188)
Q Consensus 1 m~~~~vaInG-~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~ 77 (188)
|+++||||+| +|+|||.++|.|.++ |+++++++++.. + .|+.+.++|+.+.
T Consensus 1 ~~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-------------~-------------~G~~~~~~~~~i~ 54 (336)
T 2r00_A 1 SQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-------------S-------------EGKTYRFNGKTVR 54 (336)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------------T-------------TTCEEEETTEEEE
T ss_pred CCccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-------------C-------------CCCceeecCceeE
Confidence 4458999999 599999999999998 889999998741 1 1223556777777
Q ss_pred EEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCCC--CcEEE
Q 029788 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKPE--LNIVS 150 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~~--~~ivs 150 (188)
+. +.+++ +|+ ++|+||+|+|.+.+++.++.|+++|++ +|+++++ ++|++|||||++.|+.. .++||
T Consensus 55 ~~-~~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~--vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIa 127 (336)
T 2r00_A 55 VQ-NVEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVV--VIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIA 127 (336)
T ss_dssp EE-EGGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEE
T ss_pred Ee-cCChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCE--EEEcCCccccCCCCCeEeccCCHHHhccccCCcEEE
Confidence 74 44554 684 799999999999999999999999994 5655543 58999999999999852 57999
Q ss_pred cCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 151 ~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
||||+|||++|+|+||+++|||+++.|||+|++||+|
T Consensus 128 np~C~tt~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG 164 (336)
T 2r00_A 128 NPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAG 164 (336)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEESSSCC
T ss_pred CCChHHHHHHHHHHHHHHhCCccEEEEEEEEecccCC
Confidence 9999999999999999999999999999999999996
No 26
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=6.4e-34 Score=244.16 Aligned_cols=149 Identities=25% Similarity=0.370 Sum_probs=123.7
Q ss_pred ceEEEEc-cCHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 4 VKIGING-FGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~~vaInG-~GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||+| +|+|||.++|.|.++ |.++++ ++. |. +. .|+.+.++|+.+.++.
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~--------------~~~--s~---------~~-~g~~l~~~g~~i~v~~ 54 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELR--------------LYA--SP---------RS-AGVRLAFRGEEIPVEP 54 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE--------------EEE--CG---------GG-SSCEEEETTEEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE--------------Eee--cc---------cc-CCCEEEEcCceEEEEe
Confidence 4899999 599999999999954 433322 221 10 00 2456889999999876
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCCCCcEEEcCChh
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKPELNIVSNASCT 155 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~~~~ivs~~sCt 155 (188)
. +|+ +| ++|+||+|+|.+.+++.++.|+++|+ +||+++++ |+|++|||||++.|+...++||||||+
T Consensus 55 ~-~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~--~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~iIanp~C~ 126 (331)
T 2yv3_A 55 L-PEG--PL---PVDLVLASAGGGISRAKALVWAEGGA--LVVDNSSAWRYEPWVPLVVPEVNREKIFQHRGIIANPNCT 126 (331)
T ss_dssp C-CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTC--EEEECSSSSTTCTTSCBCCTTSCGGGGGGCSSEEECCCHH
T ss_pred C-Chh--hc---CCCEEEECCCccchHHHHHHHHHCCC--EEEECCCccccCCCCCEEEcCcCHHHhcCCCCEEECCCHH
Confidence 5 565 58 79999999999999999999999999 46666654 589999999999998646799999999
Q ss_pred hHhHHHHHHHHHHhcCceEEEEEEEeeccCC
Q 029788 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 156 T~~la~~lk~l~~~~gI~~~~vtTvha~s~~ 186 (188)
|||++|+|+||+++|||+++.|||+|++||+
T Consensus 127 tt~~~~~l~pL~~~~~I~~~~vtt~~~~Sga 157 (331)
T 2yv3_A 127 TAILAMALWPLHRAFQAKRVIVATYQAASGA 157 (331)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGG
T ss_pred HHHHHHHHHHHHHhCCceEEEEEEEeecccC
Confidence 9999999999999999999999999999997
No 27
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=9.4e-34 Score=243.89 Aligned_cols=155 Identities=13% Similarity=0.144 Sum_probs=130.0
Q ss_pred CcceEEEEcc-CHHHHHHHHHHH--cCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 2 GKVKIGINGF-GRIGRLVARVIL--QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~~vaInG~-GrIGr~~lr~l~--~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|++||+|+|+ |+|||.++|.|. .+|.++++++++.. + . |+.+.++|+.+.+
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~-------------~-~------------g~~~~~~g~~i~~ 58 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE-------------S-A------------GQRMGFAESSLRV 58 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT-------------T-T------------TCEEEETTEEEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC-------------C-C------------CCccccCCcceEE
Confidence 3589999995 999999999999 56889999998741 1 1 2224466767766
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC--CCCeEEeecCccCcCCCC--cEEEcCCh
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNEHEYKPEL--NIVSNASC 154 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~--d~p~~V~gvN~~~~~~~~--~ivs~~sC 154 (188)
. +.+++. |. ++|+||+|+|.+.+++.++.|+++|+++|.+|++.. ++|+++||||++.|+..+ ++||||||
T Consensus 59 ~-~~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C 133 (340)
T 2hjs_A 59 G-DVDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCA 133 (340)
T ss_dssp E-EGGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCH
T ss_pred e-cCCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCH
Confidence 4 335543 75 799999999999999999999999998776777763 369999999999998532 79999999
Q ss_pred hhHhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 155 TTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 155 tT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
+|||++|+|+||+++|||+++.|||+|++||+|
T Consensus 134 ~tt~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG 166 (340)
T 2hjs_A 134 VAAELCEVLAPLLATLDCRQLNLTACLSVSSLG 166 (340)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEEEEECGGGGC
T ss_pred HHHHHHHHHHHHHHhcCcceEEEEEecccCCCC
Confidence 999999999999999999999999999999987
No 28
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=4.1e-34 Score=245.36 Aligned_cols=166 Identities=23% Similarity=0.278 Sum_probs=138.7
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheec--cccccccccce-EEeCCCceEECCEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYD--SVHGQWKHHEL-KVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~yd--S~~g~~~~~~v-~~~~~~~l~i~g~~i~v 78 (188)
||+||||+|+|+|||.++|++.++|++++++|+|. +++.+.++++|+ ++||+|+ +.+ .++++ .+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~--~~~~~~~~~~~~g~~~~~~~~-~~v~~~~~~-~~~v~~----- 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKT--KPDFEAYRAKELGIPVYAASE-EFIPRFEKE-GFEVAG----- 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEES--SCSHHHHHHHHTTCCEEESSG-GGHHHHHHH-TCCCSC-----
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHHHHHhcCcccccccc-ccceeccCC-ceEEcC-----
Confidence 14899999999999999999999999999999997 578888999988 8899887 444 11111 132322
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-C-C-CeEEeecCccCcCCCCcEEEcCChh
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-D-A-PMFVVGVNEHEYKPELNIVSNASCT 155 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-d-~-p~~V~gvN~~~~~~~~~ivs~~sCt 155 (188)
+++++.| ++|+||+|||.+.+.+.++.|+++|. +|++++|.+ | . |++|+|+|++.|+. .++|+||||+
T Consensus 72 ----d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aGk-~Vi~sap~~~d~~~~~~v~~vn~~~~~~-~~ii~~~~C~ 142 (334)
T 2czc_A 72 ----TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAGV-KAIFQGGEKADVAEVSFVAQANYEAALG-KNYVRVVSCN 142 (334)
T ss_dssp ----BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHTC-EEEECTTSCGGGSSEEECHHHHGGGGTT-CSEEEECCHH
T ss_pred ----cHHHhcc---CCCEEEECCCccccHHHHHHHHHcCC-ceEeecccccccccceEEeccCHHHHhh-CCcEEecCcH
Confidence 3444434 69999999999999999999999994 688888875 4 4 59999999999974 6899999999
Q ss_pred hHhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 156 TNCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 156 T~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
|+||+|++++|++. |+++.|+|+|++|+.|
T Consensus 143 t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~ 172 (334)
T 2czc_A 143 TTGLVRTLSAIREY--ADYVYAVMIRRAADPN 172 (334)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEEEEEESSCTT
T ss_pred HHHHHHHHHHHHHH--hccccEEEEEEecCcc
Confidence 99999999999986 9999999999999986
No 29
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=7.1e-34 Score=244.69 Aligned_cols=166 Identities=19% Similarity=0.250 Sum_probs=124.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||+|||+|||.++|++.++|++++++|+|. +++..+++++++- +..+. .. +-..+ +++..+.+. .+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~--~~~~~~~~a~~~g-~~~~~-~~----~~~~~-~~~~~v~v~--~~ 70 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT--SPNYEAFIAHRRG-IRIYV-PQ----QSIKK-FEESGIPVA--GT 70 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--SCSHHHHHHHHTT-CCEEC-CG----GGHHH-HHTTTCCCC--CC
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcC--ChHHHHHHHHhcC-cceec-Cc----CHHHH-hcccccccc--cC
Confidence 799999999999999999999999999999996 5677778776531 00000 00 00000 100001110 01
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC--CCeEEeecCccCcCCCCcEEEcCChhhHhHHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD--APMFVVGVNEHEYKPELNIVSNASCTTNCLAP 161 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d--~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la~ 161 (188)
++++ + .++|+||+|||.+.+++.++.|+++|++++.+|++.++ .++|++++|++.+.. .++|+|||||||||+|
T Consensus 71 ~e~l-~--~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~-~~iIsnpsCtt~~l~~ 146 (340)
T 1b7g_O 71 VEDL-I--KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG-KKYIRVVSCNTTALLR 146 (340)
T ss_dssp HHHH-H--HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT-CSEEEECCHHHHHHHH
T ss_pred HhHh-h--cCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC-CCCcccCCcHHHHHHH
Confidence 1111 1 16899999999999999999999999998877877654 479999999776543 3599999999999999
Q ss_pred HHHHHHHhcCceEEEEEEEeecc
Q 029788 162 LAKVIHDKFGIVEGLMTTVHSIT 184 (188)
Q Consensus 162 ~lk~l~~~~gI~~~~vtTvha~s 184 (188)
+||||+++|||+++.|||+|+++
T Consensus 147 ~lk~L~~~~gI~~~~~tt~~~~~ 169 (340)
T 1b7g_O 147 TICTVNKVSKVEKVRATIVRRAA 169 (340)
T ss_dssp HHHHHHTTSCEEEEEEEEEEESS
T ss_pred HHHHHHHhCCeEEEEEEEEeccC
Confidence 99999999999999999999885
No 30
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=99.98 E-value=5.4e-34 Score=247.67 Aligned_cols=156 Identities=17% Similarity=0.177 Sum_probs=126.1
Q ss_pred ceEEEEcc-CHHHHHHHH-HHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 4 VKIGINGF-GRIGRLVAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr-~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+||||+|+ |++|+.++| .|.++ +++++.| |++.|+| +|+- +. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~-~~~~v~i-----------~~~~~~s-~G~~----v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEER-DFDAIRP-----------VFFSTSQ-LGQA----AP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-GGGGSEE-----------EEEESSS-TTSB----CC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcC-CCCeEEE-----------EEEEeCC-CCCC----cc-------ccCCCceEEEec
Confidence 69999995 999999999 55555 4544443 5677776 6541 11 033445555544
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCCC---C-cEEEcC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKPE---L-NIVSNA 152 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~~---~-~ivs~~ 152 (188)
.+++. |+ ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ ++|++|||||++.|+.. . ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 34443 74 799999999999999999999999999899999986 68999999999998742 1 699999
Q ss_pred ChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCCC
Q 029788 153 SCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIV 187 (188)
Q Consensus 153 sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~ 187 (188)
||+|+|++|+|+||+++++|+++.|||||++||++
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG 168 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGG 168 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTC
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEecccccc
Confidence 99999999999999999999999999999999984
No 31
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=99.97 E-value=4.4e-33 Score=240.47 Aligned_cols=167 Identities=17% Similarity=0.211 Sum_probs=132.3
Q ss_pred CcceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||||+| +|+|||.++|.|.++|+++++++++...+ ....|+++|+.+. ++ .+.++++.+.+ .
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~-----~g~~~~~~~~~~~-------~~-~~~~~~~~~~~-~ 68 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSK-----IGKKYKDAVKWIE-------QG-DIPEEVQDLPI-V 68 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGG-----TTSBHHHHCCCCS-------SS-SCCHHHHTCBE-E
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhh-----cCCCHHHhcCccc-------cc-ccccCCceeEE-e
Confidence 368999999 59999999999999999999999853111 1123577776542 11 12233333334 2
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCC----------C
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKP----------E 145 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~----------~ 145 (188)
+.+++. |. ++|+||+|||.+.+++.++.|+++|++ |||+|++ +.|+++||+|++.|+. .
T Consensus 69 ~~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~ 142 (350)
T 2ep5_A 69 STNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWK 142 (350)
T ss_dssp CSSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCS
T ss_pred eCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccC
Confidence 334443 53 799999999999999999999999995 7888875 5899999999998873 2
Q ss_pred CcEEEcCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 146 LNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 146 ~~ivs~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
.++||||||+|+|++|+|+||+++|||+++.|||+|++||+|.
T Consensus 143 ~~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~ 185 (350)
T 2ep5_A 143 GILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGY 185 (350)
T ss_dssp SEEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCS
T ss_pred ceEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCC
Confidence 3699999999999999999999999999999999999999884
No 32
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=4.7e-32 Score=234.23 Aligned_cols=168 Identities=23% Similarity=0.303 Sum_probs=130.5
Q ss_pred CcceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeC-CCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVND-PFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind-~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||+| +|+|||.++|.|.++|+++++++++ ..... -.+++.|+.+. .. .+..+++.+.+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g------~~~~~~~~~~~-~~-------~~~~~~~~~~~- 71 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAG------KKYKDACYWFQ-DR-------DIPENIKDMVV- 71 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTT------SBHHHHSCCCC-SS-------CCCHHHHTCBC-
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccc------ccHHHhccccc-cc-------ccccCceeeEE-
Confidence 358999999 5999999999999999999999985 21111 12466666542 00 01111122223
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCC----------
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKP---------- 144 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~---------- 144 (188)
.+.++++ |.+.++|+||+|+|.+.+++.++.|+++|++ |||+|++ +.|+++||+|++.|+.
T Consensus 72 ~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~ 147 (354)
T 1ys4_A 72 IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGW 147 (354)
T ss_dssp EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHCC
T ss_pred EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhccc
Confidence 2335554 6434799999999999999999999999984 8999875 4799999999998873
Q ss_pred CCcEEEcCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 145 ELNIVSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 145 ~~~ivs~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
..++|+||||+|||++|+|+||+++|||+++.|||+|++||+|.
T Consensus 148 ~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~ 191 (354)
T 1ys4_A 148 DGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGY 191 (354)
T ss_dssp SSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCT
T ss_pred CCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCc
Confidence 23599999999999999999999999999999999999999884
No 33
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=99.97 E-value=4.8e-31 Score=228.50 Aligned_cols=159 Identities=13% Similarity=0.144 Sum_probs=127.7
Q ss_pred CCcceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+| +|+|||.++|.|.++|+++++++++.. +. -.+|+++|++|. +.+ . .+ +.+
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-~~-----g~~~~~~~~~~~-~~v-~--~d-l~~-------- 74 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-KA-----GQSMESVFPHLR-AQK-L--PT-LVS-------- 74 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-TT-----TSCHHHHCGGGT-TSC-C--CC-CBC--------
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-hc-----CCCHHHhCchhc-Ccc-c--cc-cee--------
Confidence 3458999999 599999999999999999999999852 22 257889998887 332 1 11 222
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCC---C------------------CeEEeec-
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKD---A------------------PMFVVGV- 137 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d---~------------------p~~V~gv- 137 (188)
. + ++ .|+ ++|+||+|||.+.+++.++.| ++|+ +||+.+++. . |.+++|+
T Consensus 75 ~--~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvp 145 (359)
T 1xyg_A 75 V--K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLT 145 (359)
T ss_dssp G--G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCH
T ss_pred c--c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECC
Confidence 1 1 22 575 799999999999999999999 9998 567777632 1 3455655
Q ss_pred --CccCcCCCCcEEEcCChhhHhHHHHHHHHHHhcCce--EEEEEEEeeccCCCC
Q 029788 138 --NEHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIVD 188 (188)
Q Consensus 138 --N~~~~~~~~~ivs~~sCtT~~la~~lk~l~~~~gI~--~~~vtTvha~s~~~~ 188 (188)
|++.++. .++||||||+|||++|+|+||+++|+|+ ++.|||+|++||+|.
T Consensus 146 E~n~~~i~~-~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~ 199 (359)
T 1xyg_A 146 EILREDIKK-ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGR 199 (359)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCS
T ss_pred ccCHHHhcc-CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCc
Confidence 9999985 6899999999999999999999999999 999999999999873
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=99.97 E-value=7.7e-31 Score=226.14 Aligned_cols=157 Identities=15% Similarity=0.041 Sum_probs=124.7
Q ss_pred CC-cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~-~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|| ++||||+|+ |+|||.++|.|.++|+++++++++.. +. -.+|++.|++|. +. ..+. +
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~-~~-----g~~~~~~~~~~~-g~------~~~~-------~ 60 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR-FA-----GEPVHFVHPNLR-GR------TNLK-------F 60 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST-TT-----TSBGGGTCGGGT-TT------CCCB-------C
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch-hh-----CchhHHhCchhc-Cc------cccc-------c
Confidence 54 689999995 99999999999999999999999842 22 256788888776 21 1121 1
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----------------------CCCeEEe
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----------------------DAPMFVV 135 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----------------------d~p~~V~ 135 (188)
. +++ +|. ++|+||+|+|.+.+++.++.|+++|++ ||+.+++ +.|+.+|
T Consensus 61 ~---~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~--VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvp 131 (345)
T 2ozp_A 61 V---PPE--KLE--PADILVLALPHGVFAREFDRYSALAPV--LVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVP 131 (345)
T ss_dssp B---CGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSE--EEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCH
T ss_pred c---chh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCE--EEEcCccccCCChHHHHhhhccccchhhhccCcEecc
Confidence 1 222 373 799999999999999999999999985 5655542 1334445
Q ss_pred ecCccCcCCCCcEEEcCChhhHhHHHHHHHHHHhcCce--EEEEEEEeeccCCC
Q 029788 136 GVNEHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIV 187 (188)
Q Consensus 136 gvN~~~~~~~~~ivs~~sCtT~~la~~lk~l~~~~gI~--~~~vtTvha~s~~~ 187 (188)
|+|++.++. .++|+||||+|||++|+|+||+++|+|+ ++.|||+|++||.|
T Consensus 132 E~n~~~i~~-~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG 184 (345)
T 2ozp_A 132 ELYREALKG-ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGG 184 (345)
T ss_dssp HHHHHHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGC
T ss_pred ccCHHHhhc-CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccC
Confidence 559999985 6899999999999999999999999999 99999999999987
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=99.97 E-value=1e-29 Score=220.51 Aligned_cols=152 Identities=19% Similarity=0.331 Sum_probs=125.0
Q ss_pred CcceEEEEcc-CHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 2 GKVKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~~vaInG~-GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|++||||+|+ |.+|+.++|.|.++ |.++++.+... .| .|+.+.+.|+.+.+
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------~s-------------aG~~~~~~~~~~~~ 54 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------RS-------------AGKSLKFKDQDITI 54 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------TT-------------TTCEEEETTEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------cc-------------CCCcceecCCCceE
Confidence 2489999999 99999999999988 66777666532 11 24456677777766
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC-----CCCCeEEeecCccCcCCCCcEEEcCC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNEHEYKPELNIVSNAS 153 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps-----~d~p~~V~gvN~~~~~~~~~ivs~~s 153 (188)
. +.+++. |. ++|+||+|+|.+.+++.++.|+++|++ ||+.++ +++|++|||||++.++...++|||||
T Consensus 55 ~-~~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~--vIDlSa~~R~~~~~p~~vpevN~~~i~~~~~iIanpg 127 (366)
T 3pwk_A 55 E-ETTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVV--VVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPN 127 (366)
T ss_dssp E-ECCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGTTCCSEEECCC
T ss_pred e-eCCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCE--EEEcCCccccCCCceEEEccCCHHHHcCCCCeEECCC
Confidence 4 334443 43 799999999999999999999999994 566654 35799999999999986468999999
Q ss_pred hhhHhHHHHHHHHHHhcCceEEEEEEEeeccCC
Q 029788 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 154 CtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~ 186 (188)
|+|+|++|+|+||+++|||+++.|||+|++||.
T Consensus 128 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~vSGA 160 (366)
T 3pwk_A 128 CSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGA 160 (366)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEBCGGGG
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEEEEEEecccc
Confidence 999999999999999999999999999999985
No 36
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=99.96 E-value=1.9e-29 Score=217.33 Aligned_cols=150 Identities=24% Similarity=0.390 Sum_probs=124.7
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcC--CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 4 VKIGINGF-GRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~--~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+||||+|+ |.+|+.++|.|.+| |.++++.+... .| .|+.+.+.|+.+.+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~~-------------aG~~~~~~~~~~~~~- 54 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------RS-------------QGRKLAFRGQEIEVE- 54 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------TT-------------SSCEEEETTEEEEEE-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------cc-------------CCCceeecCCceEEE-
Confidence 69999999 99999999999998 66676666432 12 244566777777664
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC-----CCCCeEEeecCc-cCcCCC-CcEEEcCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNE-HEYKPE-LNIVSNAS 153 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps-----~d~p~~V~gvN~-~~~~~~-~~ivs~~s 153 (188)
+.+++ .|. ++|+||+|+|.+.+++.++.|+++|+ +||++++ +|+|++|||||+ +.++.. .++|||||
T Consensus 55 ~~~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpg 128 (344)
T 3tz6_A 55 DAETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPN 128 (344)
T ss_dssp ETTTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCC
T ss_pred eCCHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCC
Confidence 33443 453 79999999999999999999999999 5677775 358999999999 888753 58999999
Q ss_pred hhhHhHHHHHHHHHHhcCceEEEEEEEeeccCC
Q 029788 154 CTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 154 CtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~ 186 (188)
|+|+|++|+|+||+++|||+++.|||+|++||.
T Consensus 129 C~tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGA 161 (344)
T 3tz6_A 129 CTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGS 161 (344)
T ss_dssp HHHHHHHHHHHHHHHHHCEEEEEEEEEBCGGGG
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEEeccCCCcc
Confidence 999999999999999999999999999999984
No 37
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=99.96 E-value=1.6e-30 Score=225.86 Aligned_cols=153 Identities=18% Similarity=0.192 Sum_probs=119.9
Q ss_pred ceEEEEcc-CHHHHHHHH-HHHcCC--CceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 4 VKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr-~l~~~~--~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
+||||+|+ |.+|+.++| +|.+|| .++++.+... | -|+ .+. .+.|+.+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~-aG~----~~~-------~~~~~~~~~~ 54 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS--------------Q-IGV----PAP-------NFGKDAGMLH 54 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------S-TTS----BCC-------CSSSCCCBCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc--------------c-cCc----CHH-------HhCCCceEEE
Confidence 48999999 999999999 999998 4566666442 2 121 000 0222223332
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCCC--C--cEEE
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKPE--L--NIVS 150 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~~--~--~ivs 150 (188)
...+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++|+
T Consensus 55 ~~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 130 (370)
T 3pzr_A 55 DAFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFV 130 (370)
T ss_dssp ETTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred ecCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEE
Confidence 1112222 32 799999999999999999999999998899999974 57999999999998642 3 4699
Q ss_pred cCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCC
Q 029788 151 NASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 151 ~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~ 186 (188)
||||+|+|++|+|+||+++|||+++.|||+|++||.
T Consensus 131 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 166 (370)
T 3pzr_A 131 GGNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGA 166 (370)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred cCChHHHHHHHHHHHHHHhCCCcEEEEEeEEecccc
Confidence 999999999999999999999999999999999984
No 38
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=99.96 E-value=3.6e-30 Score=224.09 Aligned_cols=154 Identities=16% Similarity=0.181 Sum_probs=119.7
Q ss_pred cceEEEEcc-CHHHHHHHH-HHHcCC--CceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 3 KVKIGINGF-GRIGRLVAR-VILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr-~l~~~~--~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
++||||+|+ |.+|+.++| +|.+|| .++++.+... |..+++. + +.|+.+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~--------------~aG~~~~----~--------~~~~~~~v 57 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS--------------NAGGKAP----S--------FAKNETTL 57 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS--------------CTTSBCC----T--------TCCSCCBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech--------------hcCCCHH----H--------cCCCceEE
Confidence 479999999 999999999 999998 4566666432 1111111 0 22222233
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC-----CCCeEEeecCccCcCCC--C--cEE
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK-----DAPMFVVGVNEHEYKPE--L--NIV 149 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~-----d~p~~V~gvN~~~~~~~--~--~iv 149 (188)
....+++. |. ++|+||+|+|.+.+++.++.|+++|+|++|||+|++ |+|++|||||++.++.. + ++|
T Consensus 58 ~~~~~~~~--~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~I 133 (377)
T 3uw3_A 58 KDATSIDD--LK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNF 133 (377)
T ss_dssp EETTCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCChhH--hc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEE
Confidence 21112222 43 799999999999999999999999998899999974 47999999999998642 3 359
Q ss_pred EcCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCC
Q 029788 150 SNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGI 186 (188)
Q Consensus 150 s~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~ 186 (188)
+||||+|+|++|+|+||+++|+|+++.|||+|++||.
T Consensus 134 anp~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGA 170 (377)
T 3uw3_A 134 IGGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGA 170 (377)
T ss_dssp EECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGT
T ss_pred EcCCHHHHHHHHHHHHHHHhCCCCEEEEeeeeccccc
Confidence 9999999999999999999999999999999999984
No 39
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=99.96 E-value=1.3e-29 Score=219.48 Aligned_cols=167 Identities=17% Similarity=0.177 Sum_probs=122.1
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+ |.+|+.++|.|.++|+++++.+......-+.+...+.+. .|..++ . +++.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~------------~~~~~~v-~~ 71 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-K------------EIADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-H------------HHHTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-c------------ccccceE-Ee
Confidence 589999998 999999999999999999999964311111111110000 000000 0 0001112 12
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC---CCCCeEEeecCccCcCC--C--------CcE
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNEHEYKP--E--------LNI 148 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps---~d~p~~V~gvN~~~~~~--~--------~~i 148 (188)
.+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++|+++||||++.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpk_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23433 32 79999999999999999999999999665556554 35899999999999853 1 259
Q ss_pred EEcCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 149 vs~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
||||||+|+|++++|+||+++|||+++.|||+|++||.|.
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~ 187 (359)
T 4dpk_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGY 187 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCS
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCC
Confidence 9999999999999999999999999999999999999873
No 40
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=99.96 E-value=1.3e-29 Score=219.48 Aligned_cols=167 Identities=17% Similarity=0.177 Sum_probs=122.1
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+ |.+|+.++|.|.++|+++++.+......-+.+...+.+. .|..++ . +++.+.+ ++
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~-~~~~~~-~------------~~~~~~v-~~ 71 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQ-TVGQVP-K------------EIADMEI-KP 71 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCC-SSSCCC-H------------HHHTCBC-EE
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccc-cccccc-c------------ccccceE-Ee
Confidence 589999998 999999999999999999999964311111111110000 000000 0 0001112 12
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC---CCCCeEEeecCccCcCC--C--------CcE
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS---KDAPMFVVGVNEHEYKP--E--------LNI 148 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps---~d~p~~V~gvN~~~~~~--~--------~~i 148 (188)
.+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++|+++||||++.++. . .++
T Consensus 72 ~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~~~i 147 (359)
T 4dpl_A 72 TDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWKGFI 147 (359)
T ss_dssp CCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCSSEE
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccCccE
Confidence 23433 32 79999999999999999999999999665556554 35899999999999853 1 259
Q ss_pred EEcCChhhHhHHHHHHHHHHhcCceEEEEEEEeeccCCCC
Q 029788 149 VSNASCTTNCLAPLAKVIHDKFGIVEGLMTTVHSITGIVD 188 (188)
Q Consensus 149 vs~~sCtT~~la~~lk~l~~~~gI~~~~vtTvha~s~~~~ 188 (188)
||||||+|+|++++|+||+++|||+++.|||+|++||.|.
T Consensus 148 IanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~ 187 (359)
T 4dpl_A 148 VTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGY 187 (359)
T ss_dssp EECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCS
T ss_pred EECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCC
Confidence 9999999999999999999999999999999999999873
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=99.95 E-value=9.2e-29 Score=215.57 Aligned_cols=167 Identities=23% Similarity=0.322 Sum_probs=120.2
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCC-hhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFIT-TDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~-~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+++||||+|+ |.+|+.++|.|.++|+++++.+..+..+ -+.+. ..| +|. .+..|..+.+.+.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~------~~~-~~~-------~~~~~p~~~~~~~v 82 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYK------DAA-SWK-------QTETLPETEQDIVV 82 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHH------HHC-CCC-------CSSCCCHHHHTCBC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHH------Hhc-ccc-------cccccccccccceE
Confidence 77799999999 9999999999999999999888532100 01110 001 010 00001101111222
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC-----CCCCeEEeecCccCcC----------
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-----KDAPMFVVGVNEHEYK---------- 143 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps-----~d~p~~V~gvN~~~~~---------- 143 (188)
++.++++ .|+ ++|+||+|+|.+.+++.++.++++|++ ||++++ +|+|++++++|++.|+
T Consensus 83 -~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~--VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~ 156 (381)
T 3hsk_A 83 -QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLA--VVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAV 156 (381)
T ss_dssp -EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHH
T ss_pred -EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCE--EEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhc
Confidence 2223331 353 799999999999999999999999995 566654 2579999999999886
Q ss_pred -----CCCcEEEcCChhhHhHHHHHHHHHHhcC-ceEEEEEEEeeccCCC
Q 029788 144 -----PELNIVSNASCTTNCLAPLAKVIHDKFG-IVEGLMTTVHSITGIV 187 (188)
Q Consensus 144 -----~~~~ivs~~sCtT~~la~~lk~l~~~~g-I~~~~vtTvha~s~~~ 187 (188)
...++|+||+|+|+|++++|+||+++|| |+++.|+|+|++||.+
T Consensus 157 ~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG 206 (381)
T 3hsk_A 157 SKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAG 206 (381)
T ss_dssp HTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC--
T ss_pred ccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCC
Confidence 2356999999999999999999999999 9999999999999976
No 42
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=99.93 E-value=1.1e-26 Score=200.64 Aligned_cols=159 Identities=12% Similarity=0.062 Sum_probs=124.1
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCC-----CceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCE
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRD-----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~-----~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~ 74 (188)
|+|+||+|+|+ |++|+.++|.|.++| ++++++++... +.. -.+++.|++|. +.. .+.+
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-~ag-----k~~~~~~~~l~-~~~------~~~~--- 70 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-SAG-----STLGEHHPHLT-PLA------HRVV--- 70 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-CTT-----SBGGGTCTTCG-GGT------TCBC---
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-cCC-----Cchhhhccccc-ccc------eeee---
Confidence 55689999997 999999999999999 89999998532 111 12456676665 210 1211
Q ss_pred EEEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC--C-C--------------CeEEeec
Q 029788 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--D-A--------------PMFVVGV 137 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~--d-~--------------p~~V~gv 137 (188)
.+.+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++.. + . |..+||+
T Consensus 71 -----~~~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv 140 (352)
T 2nqt_A 71 -----EPTEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPEL 140 (352)
T ss_dssp -----EECCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTS
T ss_pred -----ccCCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEeccc
Confidence 111222 254 799999999999999999999 99986555565542 2 2 8888899
Q ss_pred --CccCcCCCCcEEEcCChhhHhHHHHHHHHHHhcCce-EEEEEEEeeccCC
Q 029788 138 --NEHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV-EGLMTTVHSITGI 186 (188)
Q Consensus 138 --N~~~~~~~~~ivs~~sCtT~~la~~lk~l~~~~gI~-~~~vtTvha~s~~ 186 (188)
|.+.++ ..++|+||+|+|+|++++|+||+++++|+ ++.|+|+|++||.
T Consensus 141 ~~n~~~i~-~~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGa 191 (352)
T 2nqt_A 141 PGARDQLR-GTRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGA 191 (352)
T ss_dssp TTHHHHHT-TCSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGG
T ss_pred ccCHHHHh-cCCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccC
Confidence 999997 46899999999999999999999999999 9999999999987
No 43
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=99.92 E-value=4.4e-26 Score=195.91 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=115.0
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+||+|.|+ |.+|+.++|.|.++|+++++.+.... +.+. .--++...|..|. +. ..+.+. +.
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~-~~~s--aGk~~~~~~p~~~--------~~------~~~~v~-~~ 66 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA-QSND--AGKLISDLHPQLK--------GI------VELPLQ-PM 66 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET-TCTT--TTSBHHHHCGGGT--------TT------CCCBEE-EE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC-chhh--cCCchHHhCcccc--------Cc------cceeEe-cc
Confidence 79999999 99999999999999999999886431 0000 0000011111111 10 012221 21
Q ss_pred -CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC--CC--CC---------------e---EEeecCc
Q 029788 83 -NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS--KD--AP---------------M---FVVGVNE 139 (188)
Q Consensus 83 -~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps--~d--~p---------------~---~V~gvN~ 139 (188)
++++ |. .++|+||+|+|.+.+++.++.|+++|++.+.+|++. +| +| . .+||+|.
T Consensus 67 ~~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~ 143 (337)
T 3dr3_A 67 SDISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCG 143 (337)
T ss_dssp SSGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCC
T ss_pred CCHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCH
Confidence 3333 31 279999999999999999999999999644444443 12 22 2 3555699
Q ss_pred cCcCCCCcEEEcCChhhHhHHHHHHHHHH--hcCceEE-EEEEEeeccCCC
Q 029788 140 HEYKPELNIVSNASCTTNCLAPLAKVIHD--KFGIVEG-LMTTVHSITGIV 187 (188)
Q Consensus 140 ~~~~~~~~ivs~~sCtT~~la~~lk~l~~--~~gI~~~-~vtTvha~s~~~ 187 (188)
+.+.. .++|+||||+|+|++++|+||++ .|+++++ .|+|+|++||.+
T Consensus 144 ~~i~~-~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG 193 (337)
T 3dr3_A 144 NKLKE-ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAG 193 (337)
T ss_dssp HHHHT-CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGC
T ss_pred HHhCC-CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCC
Confidence 99874 68999999999999999999999 6999999 999999999975
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.88 E-value=7.2e-24 Score=182.87 Aligned_cols=154 Identities=14% Similarity=0.148 Sum_probs=118.4
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+|+ |.+|+.++|.|.++|+++++.++... +. -.+|++.|..|. +.+.+ ++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~a-----G~~~~~~~p~~~----------------~~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YA-----GKKLEEIFPSTL----------------ENSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TT-----TSBHHHHCGGGC----------------CCCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cc-----cCChHHhChhhc----------------cCceE-Ee
Confidence 589999999 99999999999999999999998642 11 112233332221 11122 11
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCC----C-C------------------CeEEeecC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK----D-A------------------PMFVVGVN 138 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~----d-~------------------p~~V~gvN 138 (188)
.+++++ |. ++|+||+|+|...+++.++.+ +|+ +|||++++ + . |..+||+|
T Consensus 70 ~~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223332 23 699999999999999988876 666 78999873 2 2 77788889
Q ss_pred ccCcCCCCcEEEcCChhhHhHHHHHHHHHHhcCce--EEEEEEEeeccCCC
Q 029788 139 EHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGIV--EGLMTTVHSITGIV 187 (188)
Q Consensus 139 ~~~~~~~~~ivs~~sCtT~~la~~lk~l~~~~gI~--~~~vtTvha~s~~~ 187 (188)
.+.+.. .++|+||+|+|+++.++|+||+++++|+ ++.++|+|++||..
T Consensus 143 ~e~i~~-a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG 192 (351)
T 1vkn_A 143 REEIKN-AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAG 192 (351)
T ss_dssp HHHHTT-CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGC
T ss_pred HHHhcc-CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccC
Confidence 998874 5899999999999999999999999999 99999999999864
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.86 E-value=1.3e-08 Score=86.19 Aligned_cols=154 Identities=18% Similarity=0.196 Sum_probs=96.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHc-CCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~-~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.||+.+++.+.+ .++++++++.|...+..-....-+ +|. ... ... +
T Consensus 2 ~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~----~g~----~~~--~~~-~---------- 60 (312)
T 1nvm_B 2 NQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR----MGV----TTT--YAG-V---------- 60 (312)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH----TTC----CEE--SSH-H----------
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHH----cCC----Ccc--cCC-H----------
Confidence 136899999999999999999976 788999999997322100111101 110 000 000 0
Q ss_pred eecCC-CCCCCcCCCccEEEeecCCccCHhhHHHHHhC--CCcEEEEeCCCC-CCCeEEeecCccCcCC--CCcEEEcCC
Q 029788 80 GVRNP-EEIPWAETGAEYVVESTGVFTDKDKAAAHLKG--GAKKVIISAPSK-DAPMFVVGVNEHEYKP--ELNIVSNAS 153 (188)
Q Consensus 80 ~~~~p-~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~a--Gak~vvis~ps~-d~p~~V~gvN~~~~~~--~~~ivs~~s 153 (188)
.+. ++.+| .++|+||+|||.....+.+...+++ |. .|++..+. -.|..++++|.+.... ...+++++.
T Consensus 61 --e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk--~Vi~ekp~~~g~~~~p~v~~~~~~~~~~~~lva~~g 134 (312)
T 1nvm_B 61 --EGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI--RLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGG 134 (312)
T ss_dssp --HHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC--EEEECSTTCSSCBCCHHHHTTTTTTCSEEECCCHHH
T ss_pred --HHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC--EEEEcCcccccccccCccCHHHHHhccCCcEEEeCC
Confidence 000 11112 2699999999988888888888887 76 55654432 2577788888877632 235676767
Q ss_pred hhhHhHHHHHHHHHHhcCceEE-EEEEEeecc
Q 029788 154 CTTNCLAPLAKVIHDKFGIVEG-LMTTVHSIT 184 (188)
Q Consensus 154 CtT~~la~~lk~l~~~~gI~~~-~vtTvha~s 184 (188)
|.+ .|++..+.+.+..... .+.++++.+
T Consensus 135 ~~~---ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 135 QAT---IPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp HHH---HHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred ccc---chHHHHhhhhccchhHhHhhhhhccc
Confidence 754 5667777776765433 566776654
No 46
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.46 E-value=2.7e-07 Score=78.01 Aligned_cols=91 Identities=20% Similarity=0.270 Sum_probs=65.8
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|++|+.+++.+.++++++++++.|...+. .+ + + | +.++
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~----------------------~----~-g--v~~~- 49 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DT----------------------K----T-P--VFDV- 49 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SS----------------------S----S-C--EEEG-
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hh----------------------c----C-C--Ccee-
Confidence 7789999999999999999999988889999998862110 00 0 0 1 1111
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps 127 (188)
.+++++- .++|+|++||+.....+.+...+++|. .|+++.|.
T Consensus 50 -~d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 50 -ADVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp -GGGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred -CCHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 2344443 268999999999888888889998876 46666653
No 47
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.38 E-value=8.7e-07 Score=74.31 Aligned_cols=91 Identities=20% Similarity=0.257 Sum_probs=61.1
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|+||+.+++.+...++++++++.|. +++.... + | +.+ ..
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~--~~~~~~~-------~------------g--~~~-----~~-- 56 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR--NPAEVPF-------E------------L--QPF-----RV-- 56 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------------C------------C--TTS-----CE--
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC--CHHHHHH-------c------------C--CCc-----CC--
Confidence 446899999999999999999988889999999986 3322100 0 0 000 00
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
..+..+. .++|+|+.||+.....+.+...+++|.. |+...|
T Consensus 57 ~~~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~~-Vi~ekP 97 (304)
T 3bio_A 57 VSDIEQL----ESVDVALVCSPSREVERTALEILKKGIC-TADSFD 97 (304)
T ss_dssp ESSGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTCE-EEECCC
T ss_pred HHHHHhC----CCCCEEEECCCchhhHHHHHHHHHcCCe-EEECCC
Confidence 1122222 2699999999999988999999988763 444333
No 48
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.18 E-value=2e-06 Score=70.32 Aligned_cols=36 Identities=31% Similarity=0.494 Sum_probs=31.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
|+|+||+|+|+|++||.+++++.++++ +++++-|..
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~ 36 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGH-EIVGVIENT 36 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecC
Confidence 667899999999999999999999998 999998863
No 49
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.13 E-value=6e-06 Score=70.43 Aligned_cols=95 Identities=22% Similarity=0.324 Sum_probs=65.8
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|.+|+..++.+...+++++++|.|. +++.....-+| |. .. +
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~a~~~----g~------~~---------------~- 54 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI--LAEKREAAAQK----GL------KI---------------Y- 54 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS--SHHHHHHHHTT----TC------CB---------------C-
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHhc----CC------ce---------------e-
Confidence 346899999999999999999988889999999997 44433221111 10 00 0
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 55 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 97 (359)
T 3e18_A 55 -ESYEAV-LADEKVDAVLIATPNDSHKELAISALEAGK-HVVCEKP 97 (359)
T ss_dssp -SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-CEEeeCC
Confidence 011111 011268999999999998899999999884 4666655
No 50
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.11 E-value=8e-06 Score=69.57 Aligned_cols=94 Identities=20% Similarity=0.374 Sum_probs=65.0
Q ss_pred CCcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. .++.+...+++++++|.|. +++..+. +| . + +. ++
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~~-------~-~-~~---------------~~ 54 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS--RTEEVKR--DF-------P-D-AE---------------VV 54 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS--CHHHHHH--HC-------T-T-SE---------------EE
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--hC-------C-C-Cc---------------eE
Confidence 34689999999999996 7888888889999999997 4443211 11 1 0 00 11
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 55 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (358)
T 3gdo_A 55 --HELEEIT-NDPAIELVIVTTPSGLHYEHTMACIQAGK-HVVMEKP 97 (358)
T ss_dssp --SSTHHHH-TCTTCCEEEECSCTTTHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHcCC-eEEEecC
Confidence 1222221 12369999999999999999999999984 5666555
No 51
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=98.10 E-value=6e-06 Score=70.19 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcC------CCceEEEEeCCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQR------DDVELVAVNDPF 37 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~------~~~~vv~Ind~~ 37 (188)
|+++||||+|+|.||+.+++.+.++ +++++++|.|..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~ 44 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSR 44 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecC
Confidence 7789999999999999999999875 579999999873
No 52
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=98.09 E-value=1.3e-05 Score=68.40 Aligned_cols=88 Identities=24% Similarity=0.312 Sum_probs=60.9
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCC--------CceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEEC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRD--------DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~--------~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~ 72 (188)
|+++||||+|+|.||+.+++.+.+++ ++++++|.|.. ++ + . .+ +. .. .
T Consensus 1 Mk~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~--~~------~--~-~~-~~-------~~--~--- 56 (332)
T 2ejw_A 1 MEALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRD--PR------K--P-RA-IP-------QE--L--- 56 (332)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSC--TT------S--C-CS-SC-------GG--G---
T ss_pred CCeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECC--HH------H--h-hc-cC-------cc--c---
Confidence 76799999999999999999998876 68999999862 11 0 0 00 00 00 0
Q ss_pred CEEEEEEeecCCCCCCCcCCCccEEEeecCCc-cCHhhHHHHHhCCCcEEEEeC
Q 029788 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 73 g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~-~~~~~~~~~l~aGak~vvis~ 125 (188)
++ .|++++- ++|+|++|||.. ...+.+...+++|. -|+++
T Consensus 57 -----~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK--hVVta 97 (332)
T 2ejw_A 57 -----LR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI--PLITA 97 (332)
T ss_dssp -----EE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC--CEEEC
T ss_pred -----cc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC--eEEEC
Confidence 11 2555554 689999999866 34567778888876 45553
No 53
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.05 E-value=7.2e-06 Score=68.83 Aligned_cols=93 Identities=26% Similarity=0.353 Sum_probs=64.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||+|+|.+|+..++.+...++++++++.|. +++....+.+ +| + + + + .
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~------~~---------~--~-----~---~--~ 53 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADA--FPAAAEAIAG------AY---------G--C-----E---V--R 53 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH------HT---------T--C-----E---E--C
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC--CHHHHHHHHH------Hh---------C--C-----C---c--C
Confidence 5899999999999999999998889999999997 4443222211 00 0 0 0 0 1
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 95 (331)
T 4hkt_A 54 TIDAIE-AAADIDAVVICTPTDTHADLIERFARAGK-AIFCEKP 95 (331)
T ss_dssp CHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CHHHHh-cCCCCCEEEEeCCchhHHHHHHHHHHcCC-cEEEecC
Confidence 122111 11268999999999988899999999884 5666556
No 54
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.05 E-value=8.7e-06 Score=69.04 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=65.4
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+++||||+|+|.+|+..++.+...++++++++.|. +++....+.+ .+|- .. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~--~~~~~~~~~~---~~g~----~~-~------------------ 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR--TEDKREKFGK---RYNC----AG-D------------------ 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS--SHHHHHHHHH---HHTC----CC-C------------------
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcCC----CC-c------------------
Confidence 46899999999999999999998888999999997 4443322211 0100 00 0
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (354)
T 3db2_A 56 ATMEALL-AREDVEMVIITVPNDKHAEVIEQCARSGK-HIYVEKP 98 (354)
T ss_dssp SSHHHHH-HCSSCCEEEECSCTTSHHHHHHHHHHTTC-EEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHcCC-EEEEccC
Confidence 0111110 11368999999999988899999999884 4666666
No 55
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.05 E-value=5.4e-06 Score=68.84 Aligned_cols=97 Identities=26% Similarity=0.307 Sum_probs=60.9
Q ss_pred CCcceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|.|+||+|+| +|++||.+++.+.++++++++++-|...+.. .|+-. +++ .| + . ..+.++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~-----------~G~d~-gel---~g--~--~-~gv~v~ 64 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQ-----------LGQDA-GAF---LG--K--Q-TGVALT 64 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTT-----------TTSBT-TTT---TT--C--C-CSCBCB
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccc-----------ccccH-HHH---hC--C--C-CCceec
Confidence 6679999999 5999999999999999999999987631110 01111 010 00 0 0 011111
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
.|++++. .++|+|||+|......+.+...+++|.. +|+
T Consensus 65 --~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~~-vVi 102 (272)
T 4f3y_A 65 --DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDVK-LVI 102 (272)
T ss_dssp --CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred --CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 1332221 1579999999877777788888888875 455
No 56
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.04 E-value=6.6e-06 Score=69.50 Aligned_cols=96 Identities=27% Similarity=0.408 Sum_probs=65.1
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|++||||+|+|.+|+..++.+...+++++++|.|. +++....+.+ .+|. . . ++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~----~-~---------------~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMIDDAILYAISDV--REDRLREMKE---KLGV----E-K---------------AY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS--CHHHHHHHHH---HHTC----S-E---------------EE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HhCC----C-c---------------ee--
Confidence 24899999999999999999988889999999997 4443222221 0110 0 0 00
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 96 (344)
T 3ezy_A 54 KDPHELI-EDPNVDAVLVCSSTNTHSELVIACAKAKK-HVFCEKP 96 (344)
T ss_dssp SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred CCHHHHh-cCCCCCEEEEcCCCcchHHHHHHHHhcCC-eEEEECC
Confidence 1122111 11268999999999988888889999884 4677666
No 57
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.04 E-value=1.3e-05 Score=68.24 Aligned_cols=98 Identities=24% Similarity=0.251 Sum_probs=65.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHH-cCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~-~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
||++||||+|+|.+|+..++.+. ..+++++++|.|.. ++....+.+ .+|. .. ..+
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~--~~~~~~~a~---~~g~----~~---------------~~~ 76 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIV--AGRAQAALD---KYAI----EA---------------KDY 76 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSS--TTHHHHHHH---HHTC----CC---------------EEE
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCC--HHHHHHHHH---HhCC----CC---------------eee
Confidence 66799999999999999999998 67889999999973 332211111 0110 00 011
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 77 --~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 --NDYHDLI-NDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp --SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 1222211 1126899999999999999999999998 45666666
No 58
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.99 E-value=2.2e-05 Score=66.21 Aligned_cols=94 Identities=24% Similarity=0.377 Sum_probs=65.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||+|+|.+|+..++.+...++++++++.|. +++....+.+ .+| . .++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g------~---------------~~~--~ 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADP--FIEGAQRLAE---ANG------A---------------EAV--A 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---TTT------C---------------EEE--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC--CHHHHHHHHH---HcC------C---------------cee--C
Confidence 5899999999999999999998889999999997 4443222211 011 0 011 1
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+++++- .+.++|+|+-||+.....+.+...+++|. .|++..|
T Consensus 56 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 97 (344)
T 3euw_A 56 SPDEVF-ARDDIDGIVIGSPTSTHVDLITRAVERGI-PALCEKP 97 (344)
T ss_dssp SHHHHT-TCSCCCEEEECSCGGGHHHHHHHHHHTTC-CEEECSC
T ss_pred CHHHHh-cCCCCCEEEEeCCchhhHHHHHHHHHcCC-cEEEECC
Confidence 222221 12368999999999998899999999984 4666666
No 59
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.99 E-value=2.2e-05 Score=66.54 Aligned_cols=94 Identities=23% Similarity=0.404 Sum_probs=65.0
Q ss_pred CC-cceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 1 MG-KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 1 m~-~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
|+ ++||||+|+|.+|+. .++.+...+++++++|.|. +++... - .+. +. . +
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~--~~~~~~--~-------~~~-~~-~---------------~ 55 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS--DASKVH--A-------DWP-AI-P---------------V 55 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHH--T-------TCS-SC-C---------------E
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC--CHHHHH--h-------hCC-CC-c---------------e
Confidence 53 589999999999997 7888888889999999997 444321 0 011 00 0 1
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+ .+.+++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 ~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hV~~EKP 99 (352)
T 3kux_A 56 V--SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAGK-HVVVDKP 99 (352)
T ss_dssp E--SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTTC-EEEECSS
T ss_pred E--CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEECC
Confidence 1 1222221 12368999999999998999999999984 4666556
No 60
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.98 E-value=7.3e-06 Score=67.95 Aligned_cols=101 Identities=19% Similarity=0.222 Sum_probs=63.7
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||+|+|+ |++||.+++.+.+.++++++++.|...+. +...| .|.+. + +.-. .+.+.
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~-----~~g~d--~~~~~--------g--~~~~--~v~~~ 63 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS-----LLGSD--AGELA--------G--AGKT--GVTVQ 63 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT-----TCSCC--TTCSS--------S--SSCC--SCCEE
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchh-----hhhhh--HHHHc--------C--CCcC--Cceec
Confidence 34689999999 99999999998888889999988852111 00000 01110 0 0000 12222
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++.+- . ++|+|+|+|......+.+...+++|.. +|+..+
T Consensus 64 --~dl~~~l-~--~~DvVIDft~p~~~~~~~~~a~~~G~~-vVigTt 104 (273)
T 1dih_A 64 --SSLDAVK-D--DFDVFIDFTRPEGTLNHLAFCRQHGKG-MVIGTT 104 (273)
T ss_dssp --SCSTTTT-T--SCSEEEECSCHHHHHHHHHHHHHTTCE-EEECCC
T ss_pred --CCHHHHh-c--CCCEEEEcCChHHHHHHHHHHHhCCCC-EEEECC
Confidence 2454432 1 689999988777777888888999885 555343
No 61
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.98 E-value=1.1e-05 Score=67.93 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=65.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|.+|+.+++.+.+.++++++++.|. +++....+.+ .+|. . .. +
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~--~~~~~~~~~~---~~~~----~-~~-------~--------- 56 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR--RLENAQKMAK---ELAI----P-VA-------Y--------- 56 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS--SSHHHHHHHH---HTTC----C-CC-------B---------
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHH---HcCC----C-ce-------e---------
Confidence 446899999999999999999998888999999987 3333222211 0110 0 00 0
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 57 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 99 (330)
T 3e9m_A 57 -GSYEELC-KDETIDIIYIPTYNQGHYSAAKLALSQGK-PVLLEKP 99 (330)
T ss_dssp -SSHHHHH-HCTTCSEEEECCCGGGHHHHHHHHHHTTC-CEEECSS
T ss_pred -CCHHHHh-cCCCCCEEEEcCCCHHHHHHHHHHHHCCC-eEEEeCC
Confidence 0111110 11268999999999988898999999884 4666666
No 62
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.97 E-value=1.4e-05 Score=68.14 Aligned_cols=94 Identities=20% Similarity=0.358 Sum_probs=64.6
Q ss_pred CCcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. .++.+...+++++++|.|.. ++..+ .+|. +. .++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~---------~~~~-~~----------------~~~ 54 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERS--KELSK---------ERYP-QA----------------SIV 54 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSS--CCGGG---------TTCT-TS----------------EEE
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCC--HHHHH---------HhCC-CC----------------ceE
Confidence 34689999999999997 78888888899999999973 32211 0111 00 011
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 55 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (362)
T 3fhl_A 55 --RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAGK-NVVVEKP 97 (362)
T ss_dssp --SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 1233221 12369999999999998899999999985 4666555
No 63
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.96 E-value=1.2e-05 Score=66.74 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=64.4
Q ss_pred CCcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. +++.+...+++++++|.|. +++....+.+ .+|. .. +
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~~~----~~-~---------------- 57 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP--NKVKREKICS---DYRI----MP-F---------------- 57 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS--CHHHHHHHHH---HHTC----CB-C----------------
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcCC----CC-c----------------
Confidence 56799999999999996 8888888888999999997 4443322221 0100 00 0
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps 127 (188)
.+++++- + ++|+|+-||+.....+.+...+++|. .|++.-|.
T Consensus 58 --~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP~ 99 (308)
T 3uuw_A 58 --DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKPL 99 (308)
T ss_dssp --SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSSS
T ss_pred --CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCCC
Confidence 1122111 1 58999999999998899999999885 35655453
No 64
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.94 E-value=1.3e-05 Score=67.30 Aligned_cols=97 Identities=18% Similarity=0.209 Sum_probs=63.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|+++||||+|+|.||+.+++.+...+++++++|.|.. ++....+. ..+ + +. ..+
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~--~~~~~~~a---~~~------------~--~~------~~~- 56 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRT--LESAQAFA---NKY------------H--LP------KAY- 56 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSC--SSTTCC------CC------------C--CS------CEE-
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCC--HHHHHHHH---HHc------------C--CC------ccc-
Confidence 3468999999999999999999887889999999873 22110000 000 0 00 011
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 57 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 99 (329)
T 3evn_A 57 -DKLEDML-ADESIDVIYVATINQDHYKVAKAALLAGK-HVLVEKP 99 (329)
T ss_dssp -SCHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEccC
Confidence 1222221 12368999999999988899999999985 4666666
No 65
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.92 E-value=2.8e-05 Score=66.33 Aligned_cols=92 Identities=21% Similarity=0.316 Sum_probs=63.2
Q ss_pred cceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+|.+|+. .++.+...+++++++|.|. +++.... + +. +. . ++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~--~-------~~-~~-~---------------~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASR--DEEKVKR--D-------LP-DV-T---------------VI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS--CHHHHHH--H-------CT-TS-E---------------EE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcC--CHHHHHh--h-------CC-CC-c---------------EE--
Confidence 589999999999996 7888888889999999997 4443221 1 11 00 1 01
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAAV-QHPDVDLVVIASPNATHAPLARLALNAGK-HVVVDKP 99 (364)
T ss_dssp SCHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEeCC
Confidence 1222211 12368999999999999999999999984 4555445
No 66
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.92 E-value=1.8e-06 Score=72.41 Aligned_cols=97 Identities=23% Similarity=0.197 Sum_probs=60.8
Q ss_pred CcceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 2 GKVKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||+|+| +|++||.+++++.++|+++++++-|...+. . .|+-. +++ .| + ....+.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~-~----------~G~d~-gel---~G--~--~~~gv~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSS-F----------VDKDA-SIL---IG--S--DFLGVRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCT-T----------TTSBG-GGG---TT--C--SCCSCBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc-c----------cccch-HHh---hc--c--CcCCceee-
Confidence 358999999 599999999999999999999998863111 0 11100 110 01 0 00011221
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
.|++++. .++|+|+|+|......+.+...+++|.. +|+
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv~-vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSLI-HII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTCE-EEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCCC-EEE
Confidence 2343322 1589999999777667778888888885 444
No 67
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.91 E-value=3.1e-05 Score=65.62 Aligned_cols=96 Identities=22% Similarity=0.345 Sum_probs=63.5
Q ss_pred CcceEEEEccCHHHH-HHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 2 GKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~~vaInG~GrIGr-~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|++||||+|+|.+|+ ..++.+...+++++++|.|.. ..+.++- +| +. + + . .++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~--~~----~~-~--------~--~-------~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAA--PF----KE-K--------G--V-------NFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHH--HH----HT-T--------T--C-------EEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHH--hh----CC-C--------C--C-------eEE-
Confidence 248999999999998 677878788899999999973 2221111 11 00 0 0 0 111
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 1233321 1236899999999999889999999998 44666555
No 68
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.89 E-value=9.4e-06 Score=69.01 Aligned_cols=37 Identities=27% Similarity=0.499 Sum_probs=31.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCC-------CceEEEEeCCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRD-------DVELVAVNDPF 37 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~-------~~~vv~Ind~~ 37 (188)
|+++||||+|+|.||+.+++.+.+++ ++++++|.|..
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~ 47 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSL 47 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSS
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECC
Confidence 33599999999999999999987654 58999999863
No 69
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.88 E-value=2.1e-05 Score=65.65 Aligned_cols=94 Identities=18% Similarity=0.279 Sum_probs=61.7
Q ss_pred CCcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. +++.+...++++++++.|.. ++....+.+ .+ | + + ++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~--~~~~~~~~~---~~------------g--~-----~--~~ 56 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPT--RAKALPICE---SW------------R--I-----P--YA 56 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSS--CTTHHHHHH---HH------------T--C-----C--BC
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCC--HHHHHHHHH---Hc------------C--C-----C--cc
Confidence 33689999999999996 88988887889999999873 222111110 00 0 0 0 00
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 57 --~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 --DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp --SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred --CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122222 1368999999998888888888888885 3555555
No 70
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.88 E-value=3.5e-05 Score=68.09 Aligned_cols=93 Identities=17% Similarity=0.296 Sum_probs=60.0
Q ss_pred CcceEEEEccCHHHHHHHHHHHcC---------CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEEC
Q 029788 2 GKVKIGINGFGRIGRLVARVILQR---------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFG 72 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~---------~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~ 72 (188)
+++||||+|+|.||+.+++.+.++ +++++++|.|. +.+....++ +. ..
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~--~~~~~~~~~--~~---------~~---------- 65 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR--NLDKAEALA--GG---------LP---------- 65 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS--CHHHHHHHH--TT---------CC----------
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC--CHHHhhhhc--cc---------Cc----------
Confidence 468999999999999999887642 57999999997 333211111 00 00
Q ss_pred CEEEEEEeecCCCCCCCcCCCccEEEeecCC-ccCHhhHHHHHhCCCcEEEEeCC
Q 029788 73 EKPVTVFGVRNPEEIPWAETGAEYVVESTGV-FTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 73 g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~-~~~~~~~~~~l~aGak~vvis~p 126 (188)
++ .|++++ ..+.++|+|++|||. ....+.+...+++|. .|+..+|
T Consensus 66 -----~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 66 -----LT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp -----EE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred -----cc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 00 122221 112368999999985 777788889999886 2444445
No 71
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.88 E-value=4.1e-05 Score=64.62 Aligned_cols=97 Identities=21% Similarity=0.265 Sum_probs=65.3
Q ss_pred CcceEEEEccCHHHHHHHHHHH-cCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~-~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|++||||+|+|.+|+..++.+. ..++++++++.|. +++....+.+ .+|. .. .++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~--~~~~~~~~~~---~~g~----~~---------------~~~- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV--NQEAAQKVVE---QYQL----NA---------------TVY- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS--SHHHHHHHHH---HTTC----CC---------------EEE-
T ss_pred CeEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCC----CC---------------eee-
Confidence 2489999999999999999998 6788999999997 4443222211 1110 00 011
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 56 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~vl~EKP 98 (344)
T 3mz0_A 56 -PNDDSLL-ADENVDAVLVTSWGPAHESSVLKAIKAQK-YVFCEKP 98 (344)
T ss_dssp -SSHHHHH-HCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEECCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 1222211 11258999999999998999999999984 5666666
No 72
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.87 E-value=1.1e-05 Score=68.64 Aligned_cols=96 Identities=11% Similarity=0.110 Sum_probs=65.1
Q ss_pred CCcceEEEEccCHHHH-HHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr-~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+ .+++.+...+++++++|.|. +++....+.+ .+ | +. ..
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~------------g--~~-------~~ 78 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR--RWDRAKRFTE---RF------------G--GE-------PV 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES--SHHHHHHHHH---HH------------C--SE-------EE
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC--CHHHHHHHHH---Hc------------C--CC-------Cc
Confidence 5568999999999998 68899988889999999987 4443222111 00 0 00 00
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 79 --~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 121 (350)
T 3rc1_A 79 --EGYPALL-ERDDVDAVYVPLPAVLHAEWIDRALRAGK-HVLAEKP 121 (350)
T ss_dssp --ESHHHHH-TCTTCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCCC-cEEEeCC
Confidence 1222221 12368999999999999999999999885 3666555
No 73
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.87 E-value=2.9e-05 Score=66.12 Aligned_cols=97 Identities=18% Similarity=0.240 Sum_probs=65.1
Q ss_pred CCcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. +++.+...+++++++|.|. +++....+.+ +|. .. . ++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~------~~~-~~-~---------------~~ 57 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDS--DLERARRVHR------FIS-DI-P---------------VL 57 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECS--SHHHHGGGGG------TSC-SC-C---------------EE
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcC--CHHHHHHHHH------hcC-CC-c---------------cc
Confidence 34589999999999995 8899988889999999997 4443222211 011 00 0 11
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 58 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 100 (359)
T 3m2t_A 58 --DNVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKGV-NVFVEKP 100 (359)
T ss_dssp --SSHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTTC-EEEECSC
T ss_pred --CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 1222221 11368999999999888888999999885 3666555
No 74
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.86 E-value=4e-05 Score=64.94 Aligned_cols=97 Identities=21% Similarity=0.212 Sum_probs=61.1
Q ss_pred CCcceEEEEccCHHHHHHHHHHH-------cCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECC
Q 029788 1 MGKVKIGINGFGRIGRLVARVIL-------QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~-------~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g 73 (188)
|+++||||+|+|+||+..++++. +.++++|++|.|+. ++....+.+ +|. .. .
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~--~~~a~~~a~------~~g-~~-~----------- 81 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN--AGLAEARAG------EFG-FE-K----------- 81 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHH------HHT-CS-E-----------
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC--HHHHHHHHH------HhC-CC-e-----------
Confidence 67799999999999998777653 24578999999973 332222111 111 00 0
Q ss_pred EEEEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 74 ~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|
T Consensus 82 ----~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 82 ----AT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp ----EE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred ----ec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 11 112211 112368999999999999999999999886 2455444
No 75
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.86 E-value=1.7e-05 Score=67.00 Aligned_cols=89 Identities=19% Similarity=0.223 Sum_probs=63.3
Q ss_pred CCcceEEEEccCHHHH-HHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr-~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.||+ ..++++...+++++++|.|.. .+. +. + .++
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~--~~~-------------~g-----------~-------~~~ 69 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRH--GTV-------------EG-----------V-------NSY 69 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSS--CCC-------------TT-----------S-------EEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCC--hhh-------------cC-----------C-------Ccc
Confidence 5579999999999999 799999988899999999973 110 00 0 001
Q ss_pred eecCCCCCCCcC-CCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAE-TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~-~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+ .++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 70 --~~~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 113 (330)
T 4ew6_A 70 --TTIEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAGK-HVFLEKP 113 (330)
T ss_dssp --SSHHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcCC-cEEEeCC
Confidence 1122210 11 268999999999888899999999984 4666555
No 76
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.81 E-value=6.2e-05 Score=65.94 Aligned_cols=103 Identities=24% Similarity=0.308 Sum_probs=66.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhhe-eccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK-YDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~-ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+..++.+...+++++++|.|. +++....+.+ +. .+|. + . ..++
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~--~~~~~~~~a~~~~-~~g~-~--~---------------~~~~ 76 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP--DPYMVGRAQEILK-KNGK-K--P---------------AKVF 76 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS--CHHHHHHHHHHHH-HTTC-C--C---------------CEEE
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHHHHHHHH-hcCC-C--C---------------Ccee
Confidence 456899999999999999999988889999999997 4443322211 00 0110 0 0 0111
Q ss_pred e--ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 G--VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~--~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
. +.+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 77 ~~~~~~~~~ll-~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 77 GNGNDDYKNML-KDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp CSSTTTHHHHT-TCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred ccCCCCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 1 01222221 12369999999999988899999999885 3555444
No 77
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.79 E-value=6.2e-05 Score=63.24 Aligned_cols=96 Identities=19% Similarity=0.288 Sum_probs=63.1
Q ss_pred CcceEEEEccCHHHHHHHHHHH-cCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 2 GKVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~-~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+++||||+|+|.+|+..++.+. ..++++++++.|. +++....+.+ .+|. . .++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~--~~~~~~~~a~---~~g~----~----------------~~~- 60 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACAL--DSNQLEWAKN---ELGV----E----------------TTY- 60 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECS--CHHHHHHHHH---TTCC----S----------------EEE-
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecC--CHHHHHHHHH---HhCC----C----------------ccc-
Confidence 3589999999999999999988 7778999999987 4443221111 0110 0 011
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+.||+.....+.+...+++|. .|++..|
T Consensus 61 -~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKp 103 (346)
T 3cea_A 61 -TNYKDMI-DTENIDAIFIVAPTPFHPEMTIYAMNAGL-NVFCEKP 103 (346)
T ss_dssp -SCHHHHH-TTSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCChHhHHHHHHHHHHCCC-EEEEcCC
Confidence 1122110 11268999999999888888888898884 4555444
No 78
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.76 E-value=8e-05 Score=62.24 Aligned_cols=93 Identities=20% Similarity=0.253 Sum_probs=63.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||+|+|.+|+.+++.+...++++++++.|. +++....+. ..+ + + ..++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~--~~~~~~~~~---~~~------------~--~------~~~~--~~ 54 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR--KLETAATFA---SRY------------Q--N------IQLF--DQ 54 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECS--SHHHHHHHG---GGS------------S--S------CEEE--SC
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHH---HHc------------C--C------CeEe--CC
Confidence 699999999999999999988888999999987 444322111 101 1 0 0111 12
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
++++- +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 55 ~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~gk-~V~~EKP 94 (325)
T 2ho3_A 55 LEVFF--KSSFDLVYIASPNSLHFAQAKAALSAGK-HVILEKP 94 (325)
T ss_dssp HHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred HHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcCC-cEEEecC
Confidence 33332 2368999999998888888888888885 3555545
No 79
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.76 E-value=2e-05 Score=66.74 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=64.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcC-CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~-~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+|.+|+..++.+... ++++++++.|. +++....+.+ .+ + + ..+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~~~---~~------------~--~-------~~~-- 64 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI--DPAALKAAVE---RT------------G--A-------RGH-- 64 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HH------------C--C-------EEE--
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC--CHHHHHHHHH---Hc------------C--C-------cee--
Confidence 58999999999999999999887 78999999997 4443222211 00 0 0 111
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++ ..+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~gk-~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAGF-HVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCCC-CEEEeCC
Confidence 122222 111268999999999988888889999884 4666555
No 80
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.76 E-value=2.2e-05 Score=66.52 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=65.0
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCC-------ceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDD-------VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGE 73 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~-------~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g 73 (188)
|+++||||+|+|.||+..++++...|. .++++|.|+ +++....+.+ +|. .. .
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~--~~~~a~~~a~------~~g-~~-~----------- 62 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR--DAEAVRAAAG------KLG-WS-T----------- 62 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS--SHHHHHHHHH------HHT-CS-E-----------
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC--CHHHHHHHHH------HcC-CC-c-----------
Confidence 778999999999999998888765543 499999997 4544322221 011 00 0
Q ss_pred EEEEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 74 KPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 74 ~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
++ .|.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|
T Consensus 63 ----~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 107 (390)
T 4h3v_A 63 ----TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAGK-HVLCEKP 107 (390)
T ss_dssp ----EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred ----cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcCC-CceeecC
Confidence 11 122222 112369999999999999999999999984 4666555
No 81
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.76 E-value=3.1e-05 Score=62.12 Aligned_cols=133 Identities=20% Similarity=0.226 Sum_probs=77.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||||+|+|++|+.+++.+.. ++++++++.|..... .. .. .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~-~g~~lv~v~d~~~~~-------------------------~~----------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER-NGFEIAAILDVRGEH-------------------------EK----------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEECSSCCC-------------------------TT----------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhc-CCCEEEEEEecCcch-------------------------hh----------hc--CC
Confidence 389999999999999999884 579999998862000 00 11 12
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeC-CCC-CCCeEEeecCccCcCC-CCcEEEcCChhhHhHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA-PSK-DAPMFVVGVNEHEYKP-ELNIVSNASCTTNCLA 160 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~-ps~-d~p~~V~gvN~~~~~~-~~~ivs~~sCtT~~la 160 (188)
++++-- .++|+|++||+.....+.+...+++|. .|++. |.. +.+-...++- +.... ...+.-.+++... .
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~--~vv~~~~~~~~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~ 115 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI--DLIVLSTGAFADRDFLSRVR-EVCRKTGRRVYIASGAIGG--L 115 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC--EEEESCGGGGGSHHHHHHHH-HHHHHHCCCEEECCTTCSC--H
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC--cEEEECcccCChHHHHHHHH-HHHHhcCCeEEecCccccC--h
Confidence 332211 268999999998888888888888887 44443 321 1110000110 00110 1233333443322 2
Q ss_pred HHHHHHHHhcCceEEEEEEEeec
Q 029788 161 PLAKVIHDKFGIVEGLMTTVHSI 183 (188)
Q Consensus 161 ~~lk~l~~~~gI~~~~vtTvha~ 183 (188)
..++.... |+++..+++.|+.
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 116 DAIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHHhhc--cccEEEEEEEcCh
Confidence 33444443 8999999988864
No 82
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=97.75 E-value=6.1e-05 Score=63.98 Aligned_cols=35 Identities=34% Similarity=0.657 Sum_probs=31.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcC--------CCceEEEEeCCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPF 37 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~--------~~~~vv~Ind~~ 37 (188)
|+||||+|+|.||+.+++.+.++ +++++++|.|+.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~ 44 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSK 44 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCC
Confidence 37999999999999999999887 789999999873
No 83
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.74 E-value=7.3e-05 Score=62.79 Aligned_cols=96 Identities=20% Similarity=0.178 Sum_probs=63.7
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCC--CceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRD--DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~--~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||+|+|.||+..++.+...+ ++++++|.|. +++....+.+ .+|. ...+
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~--~~~~a~~~a~---~~~~----~~~~---------------- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR--DLSRAKEFAQ---KHDI----PKAY---------------- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS--SHHHHHHHHH---HHTC----SCEE----------------
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC--CHHHHHHHHH---HcCC----Cccc----------------
Confidence 2489999999999999999988765 4899999997 4443222211 0110 0000
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 56 --~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 --GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp --SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred --CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 0111111 1126899999999999999999999998 45666666
No 84
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.74 E-value=6.8e-05 Score=63.65 Aligned_cols=99 Identities=13% Similarity=0.195 Sum_probs=64.1
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+++||||+|+|.+|+.+++.+...+++++++|.|. +++....+.+ .+|-.. .. .++
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~--~~~~~~~~a~---~~~~~~--~~---------------~~~-- 60 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASR--SLEKAKAFAT---ANNYPE--ST---------------KIH-- 60 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECS--SHHHHHHHHH---HTTCCT--TC---------------EEE--
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCCCC--CC---------------eee--
Confidence 46899999999999999999988888999999997 4443222111 111000 00 011
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 61 ~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 61 GSYESLL-EDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 1222211 11258999999999888888888998885 3555445
No 85
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.74 E-value=6.1e-05 Score=63.62 Aligned_cols=94 Identities=15% Similarity=0.207 Sum_probs=61.5
Q ss_pred cceEEEEccCHHHHH-HHH-HHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 3 KVKIGINGFGRIGRL-VAR-VILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~~vaInG~GrIGr~-~lr-~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
++||||+|+|.+|+. .++ .+...+++++++|.|.. ++.....- ++. + . .++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~--~~~~~~~~-------~~~--------~--~-------~~~- 54 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRH--AKPEEQAP-------IYS--------H--I-------HFT- 54 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSS--CCGGGGSG-------GGT--------T--C-------EEE-
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCC--HhHHHHHH-------hcC--------C--C-------ceE-
Confidence 489999999999995 677 55667889999999973 22110100 111 0 0 111
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+++++- .+.++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAGK-NVLVEKP 97 (345)
T ss_dssp -SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred -CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcCC-cEEEeCC
Confidence 1333321 12369999999999988899999999884 4555444
No 86
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.73 E-value=8.2e-05 Score=65.11 Aligned_cols=101 Identities=13% Similarity=0.123 Sum_probs=65.5
Q ss_pred CCcceEEEEccCHHHH-HHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr-~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+ .+++.+...+++++++|.|. +.+....+.+ .+|. . .. .+.++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~--~~~~~~~~a~---~~g~----~----~~--------~~~~~ 139 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAA---EYGV----D----PR--------KIYDY 139 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECS--CHHHHHHHHH---HTTC----C----GG--------GEECS
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcC--CHHHHHHHHH---HhCC----C----cc--------ccccc
Confidence 4568999999999997 88998888778999999997 4443222111 1110 0 00 00011
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 140 --~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aGk-~Vl~EKP 182 (433)
T 1h6d_A 140 --SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAGK-HVMCEKP 182 (433)
T ss_dssp --SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCCC-cEEEcCC
Confidence 1233331 12368999999999888898989998885 3555445
No 87
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.71 E-value=6.7e-05 Score=66.33 Aligned_cols=110 Identities=13% Similarity=0.256 Sum_probs=64.4
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccc-cccccceEEeCC-CceE---ECCEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHG-QWKHHELKVKDD-KTLL---FGEKPV 76 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g-~~~~~~v~~~~~-~~l~---i~g~~i 76 (188)
+++||||+|+|++|+.+++.+...+++++++|.|. +++......+ ..|| +|. +...+. ..+. -.+ .+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~--~~era~~~a~--~~yG~~~~---~~~~~~~~~i~~a~~~g-~~ 93 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSAR--RLPNTFKAIR--TAYGDEEN---AREATTESAMTRAIEAG-KI 93 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECS--STHHHHHHHH--HHHSSSTT---EEECSSHHHHHHHHHTT-CE
T ss_pred CceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeC--CHHHHHHHHH--HhcCCccc---cccccchhhhhhhhccC-Cc
Confidence 46899999999999999999888889999999997 4443322221 0012 111 000000 0000 001 11
Q ss_pred EEEeecCCCCCCCcCCCccEEEeecCCc-cCHhhHHHHHhCCCcEEEEe
Q 029788 77 TVFGVRNPEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIIS 124 (188)
Q Consensus 77 ~v~~~~~p~~~~w~~~~vdiV~e~tg~~-~~~~~~~~~l~aGak~vvis 124 (188)
.++ .|.+++ ..+.++|+|++|||.. ...+.+...+++|. -|++
T Consensus 94 ~v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK--HVv~ 137 (446)
T 3upl_A 94 AVT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK--HLVM 137 (446)
T ss_dssp EEE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC--EEEE
T ss_pred eEE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC--cEEe
Confidence 222 233332 1223699999999863 45677888888876 5554
No 88
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.70 E-value=8.2e-05 Score=62.66 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=63.5
Q ss_pred cceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+|+|.||+. ++.++...|+++|++|.|+ +++....+.+ .+| .+ . ++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~--~~~~a~~~a~---~~g----~~-~---------------~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASR--DLTRAREMAD---RFS----VP-H---------------AF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECS--SHHHHHHHHH---HHT----CS-E---------------EE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECC--CHHHHHHHHH---HcC----CC-e---------------ee--
Confidence 589999999999986 5788888889999999997 4543222211 111 00 0 01
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++ ..+.++|.|+=||+.....+.+...+++|. -|++--|
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aGk-hVl~EKP 118 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAGK-HVVCEKP 118 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcCC-EEEEeCC
Confidence 112221 112368999999999999999999999885 3555444
No 89
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.65 E-value=7.9e-05 Score=60.86 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=31.8
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCCh
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITT 40 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~ 40 (188)
+||+|+|+ |++||.+++.+.++++++++++-|...++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl 38 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPL 38 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCH
Confidence 48999998 99999999999888889999998864333
No 90
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.63 E-value=6.7e-05 Score=62.50 Aligned_cols=92 Identities=20% Similarity=0.268 Sum_probs=63.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||||+|+|.+|+.+++.+.+.++++++++.|. +++.... +. .. +.++ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~--~~~~~~~----------~~--------~~--------~~~~--~ 59 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASS--NPDNLAL----------VP--------PG--------CVIE--S 59 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEES--CHHHHTT----------CC--------TT--------CEEE--S
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeC--CHHHHHH----------HH--------hh--------Cccc--C
Confidence 5899999999999999999988888999999986 3332111 00 01 1121 1
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+++++- .+.++|+|+.||+.....+.+...+++|. .|++.-|
T Consensus 60 ~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~eKP 101 (315)
T 3c1a_A 60 DWRSVV-SAPEVEAVIIATPPATHAEITLAAIASGK-AVLVEKP 101 (315)
T ss_dssp STHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred CHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCCC-cEEEcCC
Confidence 333321 12368999999999888888888898884 4555545
No 91
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.62 E-value=0.00011 Score=51.42 Aligned_cols=97 Identities=14% Similarity=0.229 Sum_probs=59.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+.||+|.|+|.+|+.+++.|..++..+++.+.. +++.+..+... .+.. +..+ ..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r---~~~~~~~~~~~----------~~~~-----~~~d--------~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADH---DLAALAVLNRM----------GVAT-----KQVD--------AK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEES---CHHHHHHHHTT----------TCEE-----EECC--------TT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeC---CHHHHHHHHhC----------CCcE-----EEec--------CC
Confidence 469999999999999999998885477776654 23332222210 0010 0000 00
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ 125 (188)
+++.+.-.-.++|+||.|+|.......+...++.|.+++.++.
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCCS
T ss_pred CHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEecC
Confidence 1111100002689999999988777777788889997765543
No 92
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.57 E-value=0.00012 Score=60.77 Aligned_cols=89 Identities=18% Similarity=0.244 Sum_probs=61.1
Q ss_pred CcceEEEEccCHHHHHHHHHHHc---CCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~---~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
+++||||+|+|.+|+..++.+.. .++++++++.|.. . + .. . -+ +..
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~--~------~--a~----------~--~g--~~~------- 54 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR--E------L--GS----------L--DE--VRQ------- 54 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSS--C------C--CE----------E--TT--EEB-------
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECch--H------H--HH----------H--cC--CCC-------
Confidence 36899999999999999998876 5679999999852 0 0 00 0 01 100
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+.||+.....+.+...+++|. -|++--|
T Consensus 55 ---~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 97 (294)
T 1lc0_A 55 ---ISLEDAL-RSQEIDVAYICSESSSHEDYIRQFLQAGK-HVLVEYP 97 (294)
T ss_dssp ---CCHHHHH-HCSSEEEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred ---CCHHHHh-cCCCCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEeCC
Confidence 1222221 12369999999999988899999999885 3555555
No 93
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.50 E-value=0.00049 Score=57.42 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=61.1
Q ss_pred CcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 2 GKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
|++||||+|+|.+|+. +++.+...++++++ +.|. +++....+.+ .+|. ...+
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~~~~~l~-v~d~--~~~~~~~~a~---~~g~----~~~~----------------- 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQWPDIELV-LCTR--NPKVLGTLAT---RYRV----SATC----------------- 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTSTTEEEE-EECS--CHHHHHHHHH---HTTC----CCCC-----------------
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCCceEE-EEeC--CHHHHHHHHH---HcCC----Cccc-----------------
Confidence 2489999999999984 88988877789999 9887 4443322211 0110 0000
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
....+.+ +.++|+|+.||+.....+.+...+++|.. |++.-|
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk~-V~~EKP 95 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGIP-TFVDKP 95 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTCC-EEEESC
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCCe-EEEeCC
Confidence 0011222 23699999999988888888888888753 556555
No 94
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.50 E-value=0.00018 Score=60.72 Aligned_cols=95 Identities=24% Similarity=0.251 Sum_probs=64.8
Q ss_pred cceEEEEccC-HHHHHHHHHHHcC-CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 3 KVKIGINGFG-RIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~~vaInG~G-rIGr~~lr~l~~~-~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
++||||+|+| .+|+..++.+... +++++++|.|. +++....+.+ .+|. . .++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~~~-----~---------------~~~- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSR--TRSHAEEFAK---MVGN-----P---------------AVF- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECS--SHHHHHHHHH---HHSS-----C---------------EEE-
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcC--CHHHHHHHHH---HhCC-----C---------------ccc-
Confidence 5899999999 8999999999887 78999999997 4543322211 0110 0 011
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 72 -~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 114 (340)
T 1zh8_A 72 -DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKGV-HVICEKP 114 (340)
T ss_dssp -SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTTC-EEEEESS
T ss_pred -CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCCC-cEEEeCC
Confidence 112211 112268999999999988899999999985 4666555
No 95
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.47 E-value=0.00014 Score=62.76 Aligned_cols=95 Identities=19% Similarity=0.222 Sum_probs=63.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcC--------CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCE
Q 029788 3 KVKIGINGFGRIGRLVARVILQR--------DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~--------~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~ 74 (188)
++||||+|+|.||+..++++.+. ++++|++|.|+ +++....+.+ +|. .. .
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~--~~~~a~~~a~------~~~-~~-~------------ 83 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ--DQAMAERHAA------KLG-AE-K------------ 83 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS--SHHHHHHHHH------HHT-CS-E------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC--CHHHHHHHHH------HcC-CC-e------------
Confidence 58999999999999988887643 35799999997 4443322211 111 00 0
Q ss_pred EEEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 75 PVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
++ .|.+++ ..+.++|+|+=||+.....+.+...+++|. -|++--|
T Consensus 84 ---~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 128 (412)
T 4gqa_A 84 ---AY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAGK-HVYCEKP 128 (412)
T ss_dssp ---EE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEEESC
T ss_pred ---EE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcCC-CeEeecC
Confidence 01 011211 112368999999999999999999999985 4666555
No 96
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.47 E-value=0.00012 Score=62.91 Aligned_cols=94 Identities=23% Similarity=0.332 Sum_probs=64.3
Q ss_pred cceEEEEccC-HHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFG-RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~G-rIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|+| ++|+..++.+...+++++++|.|. +++....+.+ .+| + .++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~--~~~~~~~~a~---~~g--------------~-------~~~-- 53 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDP--NEDVRERFGK---EYG--------------I-------PVF-- 53 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECS--CHHHHHHHHH---HHT--------------C-------CEE--
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeC--CHHHHHHHHH---HcC--------------C-------CeE--
Confidence 5899999999 999999999998889999999997 4443211111 000 0 001
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 54 ~~~~ell-~~~~vD~V~i~tp~~~H~~~~~~al~aGk-~Vl~EKP 96 (387)
T 3moi_A 54 ATLAEMM-QHVQMDAVYIASPHQFHCEHVVQASEQGL-HIIVEKP 96 (387)
T ss_dssp SSHHHHH-HHSCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred CCHHHHH-cCCCCCEEEEcCCcHHHHHHHHHHHHCCC-ceeeeCC
Confidence 1222221 11258999999999888899999999984 4666555
No 97
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.43 E-value=0.00015 Score=61.72 Aligned_cols=96 Identities=15% Similarity=0.244 Sum_probs=60.8
Q ss_pred CCcceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|+. ++..+. .+++++++|.|. +++....+.+ .+|. . . ++
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~-~~~~~lvav~d~--~~~~a~~~a~---~~~~----~-~---------------~~ 77 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLL-RAGARLAGFHEK--DDALAAEFSA---VYAD----A-R---------------RI 77 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHH-HTTCEEEEEECS--CHHHHHHHHH---HSSS----C-C---------------EE
T ss_pred ccCcEEEEECcCHHHHHHHHHHhh-cCCcEEEEEEcC--CHHHHHHHHH---HcCC----C-c---------------cc
Confidence 34689999999999964 555555 468999999997 4543222211 1110 0 0 00
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 78 --~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 120 (361)
T 3u3x_A 78 --ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHGK-DVLVDKP 120 (361)
T ss_dssp --SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTTC-EEEEESC
T ss_pred --CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCCC-eEEEeCC
Confidence 122221 112368999999999988899999999884 4666566
No 98
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.36 E-value=0.00044 Score=57.95 Aligned_cols=96 Identities=13% Similarity=0.185 Sum_probs=59.1
Q ss_pred CCcceEEEEccCHHHH-HHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 1 MGKVKIGINGFGRIGR-LVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 1 m~~~~vaInG~GrIGr-~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|+++||||+|+|.+|. .+++.+. ++++++++|.|.. ++....+.+ .+ + + .. ++
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~-~~~~~lvav~d~~--~~~~~~~a~---~~---~-~-~~---------------~~ 55 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLI-DAGAELAGVFESD--SDNRAKFTS---LF---P-S-VP---------------FA 55 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHH-HTTCEEEEEECSC--TTSCHHHHH---HS---T-T-CC---------------BC
T ss_pred CCccEEEEECCChHHHHHhhhhhc-CCCcEEEEEeCCC--HHHHHHHHH---hc---C-C-Cc---------------cc
Confidence 7779999999999996 5667665 4579999999973 322111110 01 0 0 00 00
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 56 --~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-hVl~EKP 98 (336)
T 2p2s_A 56 --ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAGK-DFFTAKP 98 (336)
T ss_dssp --SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCCC-cEEEeCC
Confidence 011111 011268999999999988899999998875 3555545
No 99
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.33 E-value=0.00049 Score=59.74 Aligned_cols=99 Identities=24% Similarity=0.222 Sum_probs=62.7
Q ss_pred CCcceEEEEccCH---HHHHHHHHHHcCCCceEEE-EeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEE
Q 029788 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (188)
Q Consensus 1 m~~~~vaInG~Gr---IGr~~lr~l~~~~~~~vv~-Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i 76 (188)
|+++||||+|+|+ ||+..++++...+++++++ |.|. +++....+.+ .+|-- ....+
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~--~~~~~------------- 94 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSS--TPEKAEASGR---ELGLD--PSRVY------------- 94 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCS--SHHHHHHHHH---HHTCC--GGGBC-------------
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCC--CHHHHHHHHH---HcCCC--ccccc-------------
Confidence 4468999999999 9999999888887899997 8887 4443222211 01100 00000
Q ss_pred EEEeecCCCCCCCcC-----CCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 77 TVFGVRNPEEIPWAE-----TGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 77 ~v~~~~~p~~~~w~~-----~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- .+ .++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 95 -----~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 142 (417)
T 3v5n_A 95 -----SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI-HVICDKP 142 (417)
T ss_dssp -----SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC-EEEEESS
T ss_pred -----CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC-eEEEECC
Confidence 0111110 00 258999999999998899999998885 4666555
No 100
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.32 E-value=0.0004 Score=59.81 Aligned_cols=104 Identities=21% Similarity=0.143 Sum_probs=63.2
Q ss_pred CCcceEEEEccCH---HHHHHHHHHHcCCCceEEE-EeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEE
Q 029788 1 MGKVKIGINGFGR---IGRLVARVILQRDDVELVA-VNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPV 76 (188)
Q Consensus 1 m~~~~vaInG~Gr---IGr~~lr~l~~~~~~~vv~-Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i 76 (188)
|+++||||+|+|+ ||+..++++...+++++++ |.|. +++....+.+ .+|-- ....+.+-+.+
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~--~~~~a~~~a~---~~g~~--~~~~~~~~~~l------- 75 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDI--DPIRGSAFGE---QLGVD--SERCYADYLSM------- 75 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCS--SHHHHHHHHH---HTTCC--GGGBCSSHHHH-------
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCC--CHHHHHHHHH---HhCCC--cceeeCCHHHH-------
Confidence 4568999999999 9999999888877899998 8886 4443222211 11100 00000000000
Q ss_pred EEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 77 ~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.. +++.- +.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 76 --l~--~~~~~---~~~vD~V~i~tp~~~H~~~~~~al~aGk-hVl~EKP 117 (398)
T 3dty_A 76 --FE--QEARR---ADGIQAVSIATPNGTHYSITKAALEAGL-HVVCEKP 117 (398)
T ss_dssp --HH--HHTTC---TTCCSEEEEESCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred --Hh--ccccc---CCCCCEEEECCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 00 00000 0258999999999999999999999885 3555444
No 101
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.25 E-value=0.00044 Score=56.77 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=55.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
+||++.|+|.||+.++|. + ++|++++-+ . . .+. + | +.+ ..|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~-------------k-------------~ge-l---g--v~a--~~d 53 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-R-------------I-------------SKD-I---P--GVV--RLD 53 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S-CCSEEEEEC-S-------------S-------------CCC-C---S--SSE--ECS
T ss_pred ceEEEECcCHHHHHHHhc---C-CcEEEEEEe-c-------------c-------------ccc-c---C--cee--eCC
Confidence 799999999999999997 4 799988865 1 0 011 2 1 111 236
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEE
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVI 122 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vv 122 (188)
.+++.. +.|+|+||++...-.+..++.|++|..-++
T Consensus 54 ~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~dvv~ 89 (253)
T 1j5p_A 54 EFQVPS---DVSTVVECASPEAVKEYSLQILKNPVNYII 89 (253)
T ss_dssp SCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSEEEE
T ss_pred HHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCCEEE
Confidence 777763 689999999888666778899999986433
No 102
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.23 E-value=0.00036 Score=61.95 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=66.4
Q ss_pred CCcceEEEEcc----CHHHHHHHHHHHcC-CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEE
Q 029788 1 MGKVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKP 75 (188)
Q Consensus 1 m~~~~vaInG~----GrIGr~~lr~l~~~-~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~ 75 (188)
|+++||||+|+ |.+|+..++.+... +++++++|.|. +++....+.+ .+|- . +
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~--~~~~a~~~a~---~~g~----~-----~--------- 93 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNP--TLKSSLQTIE---QLQL----K-----H--------- 93 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECS--CHHHHHHHHH---HTTC----T-----T---------
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC----C-----c---------
Confidence 34589999999 99999999999887 78999999997 4443222111 0110 0 0
Q ss_pred EEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCC-----cEEEEeCC
Q 029788 76 VTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (188)
Q Consensus 76 i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGa-----k~vvis~p 126 (188)
..++ .+.+++- .+.++|+|+-||+.....+.+...+++|. |-|++--|
T Consensus 94 ~~~~--~d~~ell-~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 94 ATGF--DSLESFA-QYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp CEEE--SCHHHHH-HCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred ceee--CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 0011 1222211 11268999999999888888889999983 56777665
No 103
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.19 E-value=0.00081 Score=56.18 Aligned_cols=94 Identities=22% Similarity=0.328 Sum_probs=62.6
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+|+ |.+|+..++++.+. +.+++++.|+..+.. .. +. .|+ ... ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~~---~~---~~~--~~~---------------~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV-GGVLVASLDPATNVG---LV---DS---FFP--EAE---------------FF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---GG---GG---TCT--TCE---------------EE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---HH---Hh---hCC--CCc---------------ee--
Confidence 489999999 89999999999887 589999999742221 11 11 011 001 11
Q ss_pred cCCCCCC-----C--cCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIP-----W--AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~-----w--~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++. | .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-NALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCCC-eEEEECC
Confidence 0122111 0 12369999999999999999999999984 4565545
No 104
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.19 E-value=0.0011 Score=55.21 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=59.8
Q ss_pred ceEEEEccCHHHHHH-HHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 4 VKIGINGFGRIGRLV-ARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~~vaInG~GrIGr~~-lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
+||||+|+|.+|+.+ ++.+.+ +++++++|.|. +++....+.+ .+|. . .. + .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~--~~~~~~~~~~---~~g~----~-~~-------~----------~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-TGGEVVSMMST--SAERGAAYAT---ENGI----G-KS-------V----------T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-TTCEEEEEECS--CHHHHHHHHH---HTTC----S-CC-------B----------S
T ss_pred CeEEEEcccHHHHHhhhHHhhc-CCCeEEEEECC--CHHHHHHHHH---HcCC----C-cc-------c----------C
Confidence 489999999999997 788877 78999999997 4443322211 0110 0 00 0 0
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+.+++ ..+.++|+|+.||+.....+.+...+++|. .|++-.|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAGK-HVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCCC-eEEEeCC
Confidence 11111 011258999999998888888888888874 3555444
No 105
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=97.17 E-value=0.00027 Score=61.40 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=31.8
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCC-ceEEEE-eCCCCChhh
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAV-NDPFITTDY 42 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~-~~vv~I-nd~~~~~~~ 42 (188)
|+||+|.|+ |.||+.+++.+.++|+ |+++++ .+. +.+.
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~--ni~~ 44 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR--NVKD 44 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS--CHHH
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCC--CHHH
Confidence 389999999 9999999999998886 999998 543 4443
No 106
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.14 E-value=0.00024 Score=62.11 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=65.6
Q ss_pred cceEEEEcc----CHHHHHHHHHHHcC-CCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEE
Q 029788 3 KVKIGINGF----GRIGRLVARVILQR-DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVT 77 (188)
Q Consensus 3 ~~~vaInG~----GrIGr~~lr~l~~~-~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~ 77 (188)
++||||+|+ |.+|+..++.+... +++++++|.|. +.+....+.+ .+|. . + +.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~--~~~~~~~~a~---~~g~----~-----~---------~~ 76 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSP--KIETSIATIQ---RLKL----S-----N---------AT 76 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECS--SHHHHHHHHH---HTTC----T-----T---------CE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeC--CHHHHHHHHH---HcCC----C-----c---------ce
Confidence 589999999 99999999999988 88999999997 4443222111 0110 0 0 01
Q ss_pred EEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCC-----cEEEEeCC
Q 029788 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGA-----KKVIISAP 126 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGa-----k~vvis~p 126 (188)
++ .+.+++- .+.++|+|+-||+.....+.+...+++|. |.|++--|
T Consensus 77 ~~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 77 AF--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp EE--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred ee--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 11 1222221 11368999999999888888888998883 55666555
No 107
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.10 E-value=0.0011 Score=52.74 Aligned_cols=94 Identities=18% Similarity=0.133 Sum_probs=61.6
Q ss_pred cceEEEEccCHHHHHHHHHH-HcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRLVARVI-LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l-~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..||+|+|+|.+|+.+++.+ ... +++++++-|. +++. . | -.++|.++. ..
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~--dp~k----------~------------g--~~i~gv~V~--~~ 130 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDV--DPEK----------V------------G--RPVRGGVIE--HV 130 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEES--CTTT----------T------------T--CEETTEEEE--EG
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeC--CHHH----------H------------h--hhhcCCeee--cH
Confidence 36899999999999999863 334 7999999885 2210 0 1 112333332 22
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps 127 (188)
.+.+++ ..+ ++|.|+-|++.....+-+...+++|.+.++.-.|-
T Consensus 131 ~dl~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 233332 134 79999999998876677777788998755554664
No 108
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.07 E-value=0.00015 Score=61.04 Aligned_cols=97 Identities=10% Similarity=0.063 Sum_probs=61.2
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCC--ChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--TTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~--~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
|++||||+|+|.+|+..++.+ .+++++++|.|... ..+..+-..+ .+|. .. .++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~---~~~~----~~---------------~~~ 56 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAIS---EMNI----KP---------------KKY 56 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHH---TTTC----CC---------------EEC
T ss_pred CceEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHH---HcCC----CC---------------ccc
Confidence 249999999999998888877 67899999999742 1222221111 0110 00 011
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++ ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 57 --~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aGk-hVl~EKP 99 (337)
T 3ip3_A 57 --NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERKI-HAFVEKP 99 (337)
T ss_dssp --SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred --CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCCC-cEEEeCC
Confidence 122222 112368999999999888888999999985 3565555
No 109
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.04 E-value=0.0014 Score=54.89 Aligned_cols=94 Identities=23% Similarity=0.210 Sum_probs=62.9
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
|+||||+|+ |.+|+..++++.+. +.+++++.|+..+.. . + +.. |+ .. . ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~-~~~lvav~d~~~~~~---~-~--~~~---~~-~~-~---------------~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSVG---I-I--DSI---SP-QS-E---------------FF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT-TCEEEEEECSSCCCG---G-G--GGT---CT-TC-E---------------EE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC-CCEEEEEEcCCHHHH---H-H--Hhh---CC-CC-c---------------EE--
Confidence 489999999 89999999999877 689999999742221 0 0 110 11 00 0 11
Q ss_pred cCCCCCC--------CcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIP--------WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~--------w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++. ..+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aGk-hVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGC-DVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCCC-eEEEECC
Confidence 0122110 012479999999999999999999999985 4666555
No 110
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.96 E-value=0.0025 Score=50.96 Aligned_cols=94 Identities=12% Similarity=0.171 Sum_probs=57.6
Q ss_pred cceEEEEccCHHHHHHHHH-HHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRLVARV-ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~-l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..||+|+|+|.+|+.+++. ....++++++++-|. +++. . | -.++|.++. ..
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~--dp~k----------~------------g--~~i~gv~V~--~~ 136 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDI--NESK----------I------------G--TEVGGVPVY--NL 136 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEES--CTTT----------T------------T--CEETTEEEE--EG
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeC--CHHH----------H------------H--hHhcCCeee--ch
Confidence 3689999999999999994 334557999999885 2211 0 1 113333332 22
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps 127 (188)
.+++++- .+ . |+|+-|++.....+-+...+++|.+.++.-.|-
T Consensus 137 ~dl~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 137 DDLEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp GGHHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred hhHHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 2333321 12 3 999999998776777778888999876666664
No 111
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.87 E-value=0.00099 Score=53.27 Aligned_cols=97 Identities=16% Similarity=0.284 Sum_probs=61.4
Q ss_pred cceEEEEccCHHHHHHHHHHH-cCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRLVARVIL-QRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~-~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
+.||+|+|+|..|+.+++.+. ++.+++++++-|. +++. ..|+ + .++|- +|..-
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~--dp~~---------kiG~------~-------~i~Gv--pV~~~ 137 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDL--DSND---------LVGK------T-------TEDGI--PVYGI 137 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEEC--TTST---------TTTC------B-------CTTCC--BEEEG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeC--Cchh---------ccCc------e-------eECCe--EEeCH
Confidence 468999999999999988742 3447999999875 2210 1111 0 01221 22221
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.+.+++- ++.++|+++-|++.....+-+....++|.+.+.--+|
T Consensus 138 ~dL~~~v-~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 138 STINDHL-IDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp GGHHHHC--CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSS
T ss_pred HHHHHHH-HHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCC
Confidence 2222211 3357999999999887667777788899987666666
No 112
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.79 E-value=0.00093 Score=56.94 Aligned_cols=97 Identities=13% Similarity=0.166 Sum_probs=59.6
Q ss_pred CCcceEEEEc-cCHHHHH-HH----HHHHcCCCceEE---------EEeCCCCChhhhhhhheeccccccccccceEEeC
Q 029788 1 MGKVKIGING-FGRIGRL-VA----RVILQRDDVELV---------AVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD 65 (188)
Q Consensus 1 m~~~~vaInG-~GrIGr~-~l----r~l~~~~~~~vv---------~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~ 65 (188)
|+++||||+| +|.+|+. .+ +++.+.+.++++ +|.|. +++....+.+ .+|. .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~--~~~~a~~~a~---~~~~----~----- 69 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGR--SAEKVEALAK---RFNI----A----- 69 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECS--SSHHHHHHHH---HTTC----C-----
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcC--CHHHHHHHHH---HhCC----C-----
Confidence 4568999999 8999997 66 777766655543 68876 3433222211 0110 0
Q ss_pred CCceEECCEEEEEEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 66 DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 66 ~~~l~i~g~~i~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
.++ .+.+++- .+.++|+|+-||+.....+.+...+++|. -|++--|
T Consensus 70 -----------~~~--~~~~~ll-~~~~iD~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 115 (383)
T 3oqb_A 70 -----------RWT--TDLDAAL-ADKNDTMFFDAATTQARPGLLTQAINAGK-HVYCEKP 115 (383)
T ss_dssp -----------CEE--SCHHHHH-HCSSCCEEEECSCSSSSHHHHHHHHTTTC-EEEECSC
T ss_pred -----------ccc--CCHHHHh-cCCCCCEEEECCCchHHHHHHHHHHHCCC-eEEEcCC
Confidence 000 1222211 11258999999999999999999999884 3554334
No 113
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=96.65 E-value=0.0094 Score=44.05 Aligned_cols=85 Identities=21% Similarity=0.349 Sum_probs=58.6
Q ss_pred cceEEEEcc----CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~~vaInG~----GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
+.+|||+|+ |++|+.+++.|.+. ++++..+|-.. + ++ .|.+ +
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~-G~~V~~vnp~~------------~---------~i----------~G~~--~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSK-GFEVLPVNPNY------------D---------EI----------EGLK--C 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTTC------------S---------EE----------TTEE--C
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHC-CCEEEEeCCCC------------C---------eE----------CCee--e
Confidence 478999999 99999999999887 47877776320 1 11 1211 1
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+ .++++++ ..+|+|+-|++.....+-++...++|++.+++..+
T Consensus 60 ~--~s~~el~---~~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 60 Y--RSVRELP---KDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp B--SSGGGSC---TTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred c--CCHHHhC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 1 2455554 25899999998766556666667789988877654
No 114
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.57 E-value=0.00087 Score=57.04 Aligned_cols=93 Identities=19% Similarity=0.222 Sum_probs=55.4
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
++||.|+|+|.+|+.+++.|.++.++. +.|. +.+.+..+.+. . .. +.++ ..
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~~~v~---~~~~--~~~~~~~~~~~-------~-~~--------~~~d--------~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDEFDVY---IGDV--NNENLEKVKEF-------A-TP--------LKVD--------AS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTTSEEE---EEES--CHHHHHHHTTT-------S-EE--------EECC--------TT
T ss_pred ccEEEEECCCHHHHHHHHHHhcCCCeE---EEEc--CHHHHHHHhcc-------C-Cc--------EEEe--------cC
Confidence 479999999999999999887664443 3333 22322222110 0 01 1111 01
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
|++.+.=--.++|+|+.|+|.+...+-++..+++|+ -+++.+
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTC--EEEECC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCc--ceEeee
Confidence 222111001268999999999988888888888888 456544
No 115
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.46 E-value=0.026 Score=45.21 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=28.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++||.|.|+|.||+.+++.|.++ +.+|+++...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ-GWRIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG-TCEEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 47999999999999999999988 4788888764
No 116
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.34 E-value=0.021 Score=47.66 Aligned_cols=91 Identities=15% Similarity=0.151 Sum_probs=53.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc--eEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~--~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
.+||+|+|+|.+|+.+.+.|.... + +|+.. |. +.+.+..+.++ |- + . ..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~-dr--~~~~~~~a~~~----------------G~-~--~----~~-- 83 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGY-DI--NPESISKAVDL----------------GI-I--D----EG-- 83 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEE-CS--CHHHHHHHHHT----------------TS-C--S----EE--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEE-EC--CHHHHHHHHHC----------------CC-c--c----hh--
Confidence 479999999999999999998774 5 66555 44 34443333211 10 0 0 01
Q ss_pred ecCCCC-CCCcCCCccEEEeecCCccCHhhHH---HHHhCCCcEEEEeCCC
Q 029788 81 VRNPEE-IPWAETGAEYVVESTGVFTDKDKAA---AHLKGGAKKVIISAPS 127 (188)
Q Consensus 81 ~~~p~~-~~w~~~~vdiV~e~tg~~~~~~~~~---~~l~aGak~vvis~ps 127 (188)
..++++ .- .++|+||.|++.....+..+ .+++.|+ +|++..|
T Consensus 84 ~~~~~~~~~---~~aDvVilavp~~~~~~vl~~l~~~l~~~~--iv~d~~S 129 (314)
T 3ggo_A 84 TTSIAKVED---FSPDFVMLSSPVRTFREIAKKLSYILSEDA--TVTDQGS 129 (314)
T ss_dssp ESCTTGGGG---GCCSEEEECSCGGGHHHHHHHHHHHSCTTC--EEEECCS
T ss_pred cCCHHHHhh---ccCCEEEEeCCHHHHHHHHHHHhhccCCCc--EEEECCC
Confidence 123443 11 26899999998765444333 3444454 7776654
No 117
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.27 E-value=0.004 Score=53.36 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.3
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCC---CceEEEEeCC
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRD---DVELVAVNDP 36 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~---~~~vv~Ind~ 36 (188)
+++||||+|+|.||+.+++.+.+++ ++++++|.|.
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4589999999999999999998875 6999999985
No 118
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.15 E-value=0.015 Score=42.30 Aligned_cols=83 Identities=19% Similarity=0.120 Sum_probs=61.2
Q ss_pred ceEEEEcc----CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEE
Q 029788 4 VKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~~vaInG~----GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
.+|||+|+ ++.|..+++.|.++. +++.+||-- ++.. .|.+ .
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~------------~~~i-------------------~G~~--~- 49 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRK------------KGEV-------------------LGKT--I- 49 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSS------------CSEE-------------------TTEE--C-
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCC------------CCcC-------------------CCee--c-
Confidence 57999999 789999999999874 799999842 1221 1211 1
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
-.+.+++| . +|+|+-+++.....+..+...+.|+|.++++..
T Consensus 50 -y~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 50 -INERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp -BCSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred -cCChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 13566676 3 899999998888778888888889998777643
No 119
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.15 E-value=0.0066 Score=49.37 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.4
Q ss_pred CC-cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~-~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+ +++|.|.|+ |.+|+.+++.|.+++ .+|+++...
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCS
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECC
Confidence 53 578999999 999999999999884 788777653
No 120
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.10 E-value=0.0099 Score=46.79 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=28.6
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|||.+|.|.|. |.||+.+++.|.+++..+|+.+..
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc
Confidence 45678999998 999999999999885478777764
No 121
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.08 E-value=0.031 Score=49.52 Aligned_cols=101 Identities=17% Similarity=0.270 Sum_probs=66.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC--------CChhhhhhhheecccc-ccccccceEEeCCCceEECCE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~--------~~~~~~a~ll~ydS~~-g~~~~~~v~~~~~~~l~i~g~ 74 (188)
.+|+|-|||-+|+.+++.|.+. +-++|+|.|.. .+.+.+..|+++-..+ |+.. .+.+ . +. +.+
T Consensus 253 ~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~----~~~~-~-~~-~a~ 324 (470)
T 2bma_A 253 QTAVVSGSGNVALYCVQKLLHL-NVKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIK----EYLN-H-SS-TAK 324 (470)
T ss_dssp CEEEEECSSHHHHHHHHHHHHT-TCEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGG----GGGG-T-CS-SCE
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHH----HHHh-h-cC-CcE
Confidence 6899999999999999999887 58999999953 2555666666543322 2222 0000 0 00 111
Q ss_pred EEEEEeecCCCCCCCcCCCccEEEeec-CCccCHhhHHHHHhCCCcE
Q 029788 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKK 120 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~t-g~~~~~~~~~~~l~aGak~ 120 (188)
.. +++++ |. ..+|+.+-|+ +..++.+.+...++.+||.
T Consensus 325 ---~v---~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak~ 363 (470)
T 2bma_A 325 ---YF---PNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCIL 363 (470)
T ss_dssp ---EC---SSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCCE
T ss_pred ---Ee---cCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcEE
Confidence 11 23333 84 5899999988 7778888888887778863
No 122
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.05 E-value=0.014 Score=45.16 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=28.3
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRH 37 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcC
Confidence 479999999 999999999999885 788887653
No 123
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.02 E-value=0.016 Score=42.81 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=59.1
Q ss_pred cceEEEEcc----CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~~vaInG~----GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
+.+|+|+|+ |+.|+.+++.+.+. ++++..+|-. + .+++ +.|.+ +
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~-G~~v~~vnp~--------~--~~~~-------------------i~G~~--~ 60 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQ-GYRVLPVNPR--------F--QGEE-------------------LFGEE--A 60 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHT-TCEEEEECGG--------G--TTSE-------------------ETTEE--C
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHC-CCEEEEeCCC--------c--ccCc-------------------CCCEE--e
Confidence 358999999 89999999998887 4787777531 0 0011 12211 2
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+ .++++++ ..+|+|+-++......+-++...++|+|.++++.+
T Consensus 61 ~--~sl~el~---~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 61 V--ASLLDLK---EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp B--SSGGGCC---SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred c--CCHHHCC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 1 2345554 26899999998766666677777889998888654
No 124
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.00 E-value=0.0049 Score=51.25 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=27.9
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|.++||.|.|+ |.||+.+++.|.+++ .++.++...
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARP 43 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECC
Confidence 33468999999 999999999999885 788887653
No 125
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=95.99 E-value=0.023 Score=42.23 Aligned_cols=86 Identities=16% Similarity=0.175 Sum_probs=58.3
Q ss_pred cceEEEEcc----CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~~vaInG~----GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
+.+|||+|+ |++|+.+++.|.+.+ +++..+|-.. . ++. +.|. ++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G-~~v~~vnp~~--------~-------------------g~~--i~G~--~~ 60 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG-YHVIPVSPKV--------A-------------------GKT--LLGQ--QG 60 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT-CCEEEECSSS--------T-------------------TSE--ETTE--EC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC-CEEEEeCCcc--------c-------------------ccc--cCCe--ec
Confidence 468999999 899999999988774 7877776320 0 000 1121 12
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ 125 (188)
+ .++++++ ..+|+|+-|++.....+-++...++|++.+++..
T Consensus 61 ~--~sl~el~---~~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 61 Y--ATLADVP---EKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp C--SSTTTCS---SCCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2 3566665 2689999999876666666666678998888764
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.94 E-value=0.0065 Score=47.91 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=28.9
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+|+||+|+|+|.+|+.+++.|.+. +.+++.+.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA-QIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT-TCCEEEECTT
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECC
Confidence 4467999999999999999999877 4777775665
No 127
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=95.89 E-value=0.03 Score=41.44 Aligned_cols=84 Identities=21% Similarity=0.237 Sum_probs=58.2
Q ss_pred cceEEEEcc----CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 3 KVKIGINGF----GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~~vaInG~----GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
+.+|||+|+ |++|+.+++.|.+. ++++..+|-. +++ +.|.+ +
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~-G~~v~~Vnp~------------~~~-------------------i~G~~--~ 67 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEH-GYDVYPVNPK------------YEE-------------------VLGRK--C 67 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT-TCEEEEECTT------------CSE-------------------ETTEE--C
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHC-CCEEEEECCC------------CCe-------------------ECCee--c
Confidence 468999999 79999999998887 4787777531 011 11211 2
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeC
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA 125 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ 125 (188)
+ .++++++ ..+|+|+-|+......+.++...++|++.++++.
T Consensus 68 y--~sl~~l~---~~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 68 Y--PSVLDIP---DKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp B--SSGGGCS---SCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred c--CCHHHcC---CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 1 2345554 2589999999887666777777788999877753
No 128
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.81 E-value=0.023 Score=47.01 Aligned_cols=87 Identities=23% Similarity=0.228 Sum_probs=57.8
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
.+||+|+|+ |++|+.+++.+.+. ++++++.-++.. . | . + +.| ++++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-g~~~V~~V~p~~------------~--g-----~-~--------~~G--~~vy~- 54 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-GTKMVGGVTPGK------------G--G-----T-T--------HLG--LPVFN- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTC------------T--T-----C-E--------ETT--EEEES-
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-CCeEEEEeCCCc------------c--c-----c-e--------eCC--eeccC-
Confidence 579999999 99999999998876 588776555510 0 0 0 0 112 12221
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
+.++++- +.++|+|+.|++.....+.+...+++|.+.+|+
T Consensus 55 -sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 55 -TVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp -SHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred -CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222221 125899999999888888888899999986444
No 129
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.74 E-value=0.0099 Score=48.17 Aligned_cols=34 Identities=32% Similarity=0.407 Sum_probs=27.7
Q ss_pred CC-cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MG-KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~-~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|. +.+|.|.|+ |.+|+.+++.|.+++ .+++++..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R 36 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVR 36 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEEC
Confidence 54 578999999 999999999999885 77777654
No 130
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.67 E-value=0.01 Score=52.06 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=30.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
..+|+|-|||-+|+.+++.|.+. +.++|+|.|+.
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~-GakvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQ-GGKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHT-TCCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEecC
Confidence 36899999999999999999887 59999999985
No 131
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.60 E-value=0.031 Score=47.97 Aligned_cols=136 Identities=16% Similarity=0.198 Sum_probs=80.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCC-CceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~-~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
++||||+|.| .|+..++++.+.+ ++++++|.|. +.+....+- ..|| + +++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~--~~~~a~~~a---~~~g--------------v-------~~~-- 57 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQ--GSARSRELA---HAFG--------------I-------PLY-- 57 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECC--SSHHHHHHH---HHTT--------------C-------CEE--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECC--CHHHHHHHH---HHhC--------------C-------CEE--
Confidence 5899999999 6999999887765 5999999997 333211111 1011 1 111
Q ss_pred cCCCCCCCcCCCccEEEeecCCccC----HhhHHHHHhCCCcEEEEeCCC--------------CCCCeEEeecCccCcC
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTD----KDKAAAHLKGGAKKVIISAPS--------------KDAPMFVVGVNEHEYK 143 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~----~~~~~~~l~aGak~vvis~ps--------------~d~p~~V~gvN~~~~~ 143 (188)
.+.+++. .++|+|+=||..... .+.+...+++|. -|++--|- .++.+ ..+-|...+.
T Consensus 58 ~~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKPl~~~ea~~l~~~A~~~g~~~-~v~~~yr~~p 132 (372)
T 4gmf_A 58 TSPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHPLHPDDISSLQTLAQEQGCCY-WINTFYPHTR 132 (372)
T ss_dssp SSGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESCCCHHHHHHHHHHHHHHTCCE-EEECSGGGSH
T ss_pred CCHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecCCCHHHHHHHHHHHHHcCCEE-EEcCcccCCH
Confidence 1344443 258888888877665 577888888886 35555552 13443 3344433221
Q ss_pred C----------------CCcEEEcCChhhHhHHHHHHHHHHhcCc
Q 029788 144 P----------------ELNIVSNASCTTNCLAPLAKVIHDKFGI 172 (188)
Q Consensus 144 ~----------------~~~ivs~~sCtT~~la~~lk~l~~~~gI 172 (188)
. .....-.+.|+..-+-|.+..|....|.
T Consensus 133 ~vr~~i~~~~~l~~~~~~~~~~i~~~~s~q~~y~~~dil~~alg~ 177 (372)
T 4gmf_A 133 AGRTWLRDAQQLRRCLAKTPPVVHATTSRQLLYSTLDLLLLALGV 177 (372)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSEEEEEECTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhccCCceEEEEEeccccccchHHHHHHhcCC
Confidence 0 1112234567788888888888776653
No 132
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.53 E-value=0.016 Score=46.65 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=27.3
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||.|.|+ |.||+.+++.|.++++.+|+++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC
Confidence 7999999 9999999999887756788888653
No 133
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.30 E-value=0.073 Score=40.96 Aligned_cols=31 Identities=29% Similarity=0.398 Sum_probs=27.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARK 33 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 8999998 999999999999874 888888753
No 134
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.14 E-value=0.025 Score=41.58 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=29.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+..+|.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~ 34 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQR-GQNVTVISN 34 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 6667899999999999999999887 478888865
No 135
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.09 E-value=0.14 Score=39.75 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=28.4
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG-HEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC-CeEEEEECC
Confidence 478999999 999999999999884 788888653
No 136
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.00 E-value=0.026 Score=46.12 Aligned_cols=32 Identities=28% Similarity=0.249 Sum_probs=27.2
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~ 44 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRP 44 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECT
T ss_pred CeEEEECCCchHHHHHHHHHHHCC-CcEEEEECC
Confidence 48999999 999999999999884 777777653
No 137
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.99 E-value=0.014 Score=50.36 Aligned_cols=155 Identities=15% Similarity=0.127 Sum_probs=76.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
.||+|.|+|.||+.+++.|.+++++ ..+.+.+. +.+....+.+ . ++...+..+.. +.++ + .
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r--~~~~~~~la~--~-l~~~~~~~~~~-----~~~D-----~---~ 63 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASR--TLSKCQEIAQ--S-IKAKGYGEIDI-----TTVD-----A---D 63 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEES--CHHHHHHHHH--H-HHHTTCCCCEE-----EECC-----T---T
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEEC--CHHHHHHHHH--H-hhhhcCCceEE-----EEec-----C---C
Confidence 5999999999999999999988765 33445443 3332222211 0 00000000100 0000 0 0
Q ss_pred CCCCCC--CcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC-CCCCeEEeecCccCcCC-----CCcEEEcCCh
Q 029788 83 NPEEIP--WAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVNEHEYKP-----ELNIVSNASC 154 (188)
Q Consensus 83 ~p~~~~--w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps-~d~p~~V~gvN~~~~~~-----~~~ivs~~sC 154 (188)
+++++. ..+.++|+||.|+|.+.....++..+++|+.-+.++.-. .+...+.+..- ..+.. ...++.+.+|
T Consensus 64 d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~vvD~a~~~~~~~~~~~~~~~-~~l~~~a~~aG~~~i~g~G~ 142 (405)
T 4ina_A 64 SIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVPYLDTANYEHPDLAKFEYKEQ-WAFHDRYKEKGVMALLGSGF 142 (405)
T ss_dssp CHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCCEEESSCCBCTTCSCBCSHHH-HTTHHHHHHHTCEEEECCBT
T ss_pred CHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCCEEEecCCCCcccchhhhHHH-HHHHHHHHHhCCEEEEcCCC
Confidence 111110 111138999999999887777788888888532222211 11111111110 01211 2456777776
Q ss_pred hhHhHHHHHHHHHHh-cC-ceEEEE
Q 029788 155 TTNCLAPLAKVIHDK-FG-IVEGLM 177 (188)
Q Consensus 155 tT~~la~~lk~l~~~-~g-I~~~~v 177 (188)
.-......+..+.++ |+ ++.+.+
T Consensus 143 ~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 143 DPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp TTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CccHHHHHHHHHHHhccCcccEEEE
Confidence 554444445455543 55 566655
No 138
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.78 E-value=0.033 Score=40.17 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=27.3
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+.+|.|.|+|++|+.+++.|.++ +.+++.+..
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-GKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEEC
Confidence 35899999999999999999987 478877754
No 139
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.78 E-value=0.052 Score=47.86 Aligned_cols=103 Identities=18% Similarity=0.320 Sum_probs=66.4
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC--------C-Chhhhhhhheecccc-ccccccceEEeCCCceEEC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------I-TTDYMTYMFKYDSVH-GQWKHHELKVKDDKTLLFG 72 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~--------~-~~~~~a~ll~ydS~~-g~~~~~~v~~~~~~~l~i~ 72 (188)
..+|+|-|||-+|+.+++.|.+. +.++|+|.|.. . +++.+..|++|-..+ |++. . + .++ + +
T Consensus 230 g~~v~VqG~GnVG~~~a~~L~~~-GakvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~-~---y-~~~-~--~ 300 (449)
T 1bgv_A 230 GKTVALAGFGNVAWGAAKKLAEL-GAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQ-D---Y-ADK-F--G 300 (449)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH-TCEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTH-H---H-HHH-H--T
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChh-h---c-ccc-c--C
Confidence 36899999999999999988877 58999998842 1 344455555543222 2322 0 0 000 1 1
Q ss_pred CEEEEEEeecCCCCCCCcCCCccEEEeec-CCccCHhhHHHHHhCCCcEEEE
Q 029788 73 EKPVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 73 g~~i~v~~~~~p~~~~w~~~~vdiV~e~t-g~~~~~~~~~~~l~aGak~vvi 123 (188)
.+.+ +++++ |. ..+|+.+-|+ +..++.+.+....+.||| +|.
T Consensus 301 a~~i------~~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~ 343 (449)
T 1bgv_A 301 VQFF------PGEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK-YYI 343 (449)
T ss_dssp CEEE------ETCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred CEEe------Cchhh-hc-CCcceeeccccccccchhhHHHHHhcCCe-EEE
Confidence 1222 12333 74 5899999988 778888988887777886 444
No 140
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.60 E-value=0.065 Score=44.31 Aligned_cols=87 Identities=16% Similarity=0.196 Sum_probs=56.7
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
..||+|.|+ |+.|+.+++.+.+. ++++++--++... +. + +.| ++++.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~-g~~~v~~VnP~~~-------------------g~-~--------i~G--~~vy~- 54 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTY-GTKIVAGVTPGKG-------------------GM-E--------VLG--VPVYD- 54 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTTCT-------------------TC-E--------ETT--EEEES-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHc-CCeEEEEECCCCC-------------------Cc-e--------ECC--EEeeC-
Confidence 479999999 99999999988876 5887643344100 00 0 122 12221
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
+.++++- +.++|+++.+++.....+.++...++|.+.+|+
T Consensus 55 -sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 55 -TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp -SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2222321 125899999998888888888888899985554
No 141
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.44 E-value=0.039 Score=44.81 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=26.0
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+|+||+|+|+|.+|..+.+.|.+.. .+|+.++.
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r 34 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGG-NDVTLIDQ 34 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCC-CcEEEEEC
Confidence 44579999999999999999988774 67766643
No 142
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.43 E-value=0.035 Score=45.29 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=27.3
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++|.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 37 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARP 37 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECC
Confidence 68999999 999999999999874 777777653
No 143
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=94.42 E-value=0.032 Score=45.30 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=26.1
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCC-CceEEEE
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRD-DVELVAV 33 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~-~~~vv~I 33 (188)
|+++||+|+|+|.+|+.+++.|.... ..+++..
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~ 37 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGY 37 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEE
Confidence 54579999999999999999887653 4666544
No 144
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.30 E-value=0.21 Score=41.37 Aligned_cols=39 Identities=23% Similarity=0.233 Sum_probs=30.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
.||||+|+|.+|..+++.+. . +++|+..+- +++.+..+.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~---~~~~~~~~~ 51 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDV---SEKALEAAR 51 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T-TSEEEEECS---CHHHHHHHH
T ss_pred CeEEEEeeCHHHHHHHHHHH-c-CCEEEEEEC---CHHHHHHHH
Confidence 68999999999999999998 6 588776653 455444444
No 145
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.26 E-value=0.055 Score=39.27 Aligned_cols=31 Identities=29% Similarity=0.608 Sum_probs=27.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 38 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIET 38 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 6899999999999999999887 478888865
No 146
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.24 E-value=0.042 Score=46.09 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=27.3
Q ss_pred CC-cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 1 m~-~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
|+ ++||+|+|+|.+|..+...+...+.++ +.+-|..
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~-v~L~Di~ 37 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGD-VVLFDIV 37 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEeCC
Confidence 53 469999999999999988888775447 5666653
No 147
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=94.19 E-value=0.048 Score=46.98 Aligned_cols=45 Identities=18% Similarity=0.243 Sum_probs=33.6
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhh
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~l 46 (188)
|.+.||+|.|+ |.||+..++.+..++.|+++++..- .+.+.++..
T Consensus 1 M~~k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~-~n~~~l~~q 46 (376)
T 3a06_A 1 MEERTLVILGATGSIGTQTLDVLKKVKGIRLIGISFH-SNLELAFKI 46 (376)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEES-SCHHHHHHH
T ss_pred CCcceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEcc-CCHHHHHHH
Confidence 54478999998 9999999999988777999999432 255554443
No 148
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=94.18 E-value=0.094 Score=42.19 Aligned_cols=32 Identities=38% Similarity=0.639 Sum_probs=26.1
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+|-.|+|+ ||+||.+.+.+ +.+++++++.-|.
T Consensus 13 ~~~~v~Ga~GrMG~~i~~~~-~~~~~elv~~id~ 45 (228)
T 1vm6_A 13 MKYGIVGYSGRMGQEIQKVF-SEKGHELVLKVDV 45 (228)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEET
T ss_pred ceeEEEEecCHHHHHHHHHH-hCCCCEEEEEEcC
Confidence 68999999 99999998876 4457999887553
No 149
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.97 E-value=0.34 Score=39.87 Aligned_cols=32 Identities=34% Similarity=0.441 Sum_probs=25.6
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+ +||+|+|+|.+|..+...|. . +.+|..+..
T Consensus 1 M~-mkI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r 32 (307)
T 3ego_A 1 MS-LKIGIIGGGSVGLLCAYYLS-L-YHDVTVVTR 32 (307)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHH-T-TSEEEEECS
T ss_pred CC-CEEEEECCCHHHHHHHHHHh-c-CCceEEEEC
Confidence 54 79999999999999988888 5 467776654
No 150
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.96 E-value=0.2 Score=44.04 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=30.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
..+|+|-|||-+|+.+++.|.+. +.++|+|.|..
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~-GakvVavsD~~ 268 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDH-GARVVAVQDHT 268 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CCEEEEeccCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 46899999999999999999887 59999999974
No 151
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.93 E-value=0.057 Score=44.84 Aligned_cols=32 Identities=16% Similarity=0.236 Sum_probs=25.8
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+++||+|+|+|.+|..+.+.|... +.+|+.++
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~ 34 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALK-GQSVLAWD 34 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC-CCEEEEEe
Confidence 357999999999999999988876 47766654
No 152
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=93.87 E-value=0.061 Score=45.32 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=27.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~-G~~V~~~dr 168 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL-GMHVIGVNT 168 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCEEEEECC
Confidence 5899999999999999999877 589888865
No 153
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.69 E-value=0.049 Score=43.39 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=22.5
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~ 26 (188)
|+++||+|+|+|.+|+.+.+.|.+..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g 27 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANAN 27 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC
Confidence 65679999999999999999887653
No 154
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.62 E-value=0.1 Score=36.85 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=26.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++|.|.|+|++|+.+++.|.+.. .+++.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG-HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 58999999999999999998774 78777754
No 155
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.56 E-value=0.22 Score=43.92 Aligned_cols=103 Identities=13% Similarity=0.257 Sum_probs=62.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC--------CChhhhhhhheeccccc-cccccceEEeCCCceEECCE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF--------ITTDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~--------~~~~~~a~ll~ydS~~g-~~~~~~v~~~~~~~l~i~g~ 74 (188)
.+|+|-|||.+|+.+++.|.+. +.++|+|.|.. .|.+.+..+.++...++ +.. .-. .+ . .+.+
T Consensus 240 ~~VaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~-~~~---~~--~-~~a~ 311 (456)
T 3r3j_A 240 KKCLVSGSGNVAQYLVEKLIEK-GAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLK-EYL---KY--S-KTAK 311 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGG-GGG---GT--C-SSCE
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchh-hhh---hc--C-CCce
Confidence 6899999999999999988876 47888999864 24555544433322211 111 000 00 0 0111
Q ss_pred EEEEEeecCCCCCCCcCCCccEEEeec-CCccCHhhHHHHHhCCCcEEEE
Q 029788 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~t-g~~~~~~~~~~~l~aGak~vvi 123 (188)
.+ +++++ |. ..+|+.+=|+ +..++.+.++.-.+.+|| +|+
T Consensus 312 ~v------~~~~i-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 312 YF------ENQKP-WN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp EE------CSCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred Ee------CCccc-cc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 23333 75 4799999886 778888888876666786 344
No 156
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=93.53 E-value=0.075 Score=45.18 Aligned_cols=31 Identities=32% Similarity=0.460 Sum_probs=26.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 204 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF-GLAIHYHNR 204 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT-TCEEEEECS
T ss_pred CEEEEEEeChhHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999999876 588877654
No 157
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=93.49 E-value=0.071 Score=44.71 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=27.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|||+|+|+||+.+++.+... +++|++.+..
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~-G~~V~~~dr~ 171 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW-GFPLRCWSRS 171 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 6899999999999999999876 5888888653
No 158
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.43 E-value=0.045 Score=44.19 Aligned_cols=31 Identities=29% Similarity=0.261 Sum_probs=26.4
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++|.|.|+ |.||+.+++.|.+++ .+++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG-NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT-CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC-CcEEEEEC
Confidence 58999999 999999999998874 67777754
No 159
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=93.34 E-value=0.081 Score=44.69 Aligned_cols=31 Identities=29% Similarity=0.429 Sum_probs=26.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~-G~~V~~~d~ 172 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYDV 172 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEECcCHHHHHHHHHHHHC-cCEEEEECC
Confidence 5899999999999999999877 488877753
No 160
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=93.27 E-value=0.084 Score=44.48 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=27.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 171 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF-GMKVLGVSR 171 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEEEECHHHHHHHHHHHhC-CCEEEEEcC
Confidence 5899999999999999999877 588888764
No 161
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.26 E-value=0.085 Score=42.24 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=29.3
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+++||.|.|+|.||+.+++.|.+++ .+|+++...
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQG-HEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTT-CCEEEEECT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 66679999999999999999999884 788888653
No 162
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.26 E-value=0.079 Score=37.60 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=26.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+.+|.|.|+|.+|+.+++.|.+.+ .+++.+..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG-HEVLAVDI 37 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT-CCCEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 357999999999999999998774 67666653
No 163
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=93.24 E-value=0.26 Score=43.41 Aligned_cols=100 Identities=15% Similarity=0.290 Sum_probs=62.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCC--------Chhhhhhhhee-ccccccccccceEEeCCCceEECCE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFI--------TTDYMTYMFKY-DSVHGQWKHHELKVKDDKTLLFGEK 74 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~--------~~~~~a~ll~y-dS~~g~~~~~~v~~~~~~~l~i~g~ 74 (188)
.+|+|-|||.+|..+++.|.+. +-+++++.|..+ |.+.+..+++. .+..|+.. .-.+ . .+.+
T Consensus 236 k~vaVQG~GnVG~~aa~~L~e~-GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~-~~~~--~-----~g~~ 306 (450)
T 4fcc_A 236 MRVSVSGSGNVAQYAIEKAMEF-GARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVA-DYAK--E-----FGLV 306 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHH-HHHH--H-----HTCE
T ss_pred CEEEEeCCChHHHHHHHHHHhc-CCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccc-cccc--c-----CCcE
Confidence 6899999999999999999887 589999987642 34455554432 11111111 0000 0 0111
Q ss_pred EEEEEeecCCCCCCCcCCCccEEEeec-CCccCHhhHHHHHhCCCcE
Q 029788 75 PVTVFGVRNPEEIPWAETGAEYVVEST-GVFTDKDKAAAHLKGGAKK 120 (188)
Q Consensus 75 ~i~v~~~~~p~~~~w~~~~vdiV~e~t-g~~~~~~~~~~~l~aGak~ 120 (188)
.+ +++++ |. ..+|+.+=|. +..++.+.++.-.+.|+|.
T Consensus 307 --~~----~~~~i-~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k~ 345 (450)
T 4fcc_A 307 --YL----EGQQP-WS-VPVDIALPCATQNELDVDAAHQLIANGVKA 345 (450)
T ss_dssp --EE----ETCCG-GG-SCCSEEEECSCTTCBCHHHHHHHHHTTCCE
T ss_pred --Ee----cCccc-cc-CCccEEeeccccccccHHHHHHHHhcCceE
Confidence 11 23332 65 4799999886 7788888888877778864
No 164
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=93.22 E-value=0.099 Score=45.63 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=29.7
Q ss_pred ceEEEEccCHHHHHHHHHHHc-CCCceEEEEeCCC
Q 029788 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~-~~~~~vv~Ind~~ 37 (188)
.+|+|.|||+||+.+++.+.. . ++++++++|+.
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~-G~kVv~~sD~~ 246 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDSK 246 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECSS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhc-CCEEEEEeCCC
Confidence 689999999999999999988 6 69999999874
No 165
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=93.17 E-value=0.089 Score=44.26 Aligned_cols=31 Identities=26% Similarity=0.582 Sum_probs=26.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++.+.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d~ 177 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM-GATVIGEDV 177 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998876 488877653
No 166
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.16 E-value=0.43 Score=41.66 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=29.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
.+|+|-|||-+|+.+++.|.+. +.++|+|.|..
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~-GakVVavsD~~ 243 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKM-GAKVIAVSDIN 243 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 6899999999999999999887 69999999973
No 167
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.14 E-value=0.076 Score=43.38 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=26.3
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCc---eEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDV---ELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~---~vv~Ind~ 36 (188)
|+++||+|+|+|.+|+.+++.+.... + +|. +.|.
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g-~~~~~V~-v~dr 37 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANG-YDPNRIC-VTNR 37 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTT-CCGGGEE-EECS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCC-CCCCeEE-EEeC
Confidence 66689999999999999999998774 4 554 4444
No 168
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.08 E-value=0.094 Score=44.64 Aligned_cols=31 Identities=29% Similarity=0.519 Sum_probs=26.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||||+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~d 52 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVYD 52 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEEe
Confidence 479999999999999999999874 7776664
No 169
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=93.07 E-value=0.029 Score=45.58 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=21.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|| +||+|+|+|++|+.+++.|... ++++.+.+.
T Consensus 1 M~-m~I~iIG~G~mG~~la~~l~~~--~~v~~v~~~ 33 (276)
T 2i76_A 1 MS-LVLNFVGTGTLTRFFLECLKDR--YEIGYILSR 33 (276)
T ss_dssp ----CCEEESCCHHHHHHHHTTC------CCCEECS
T ss_pred CC-ceEEEEeCCHHHHHHHHHHHHc--CcEEEEEeC
Confidence 54 7999999999999999887655 666555554
No 170
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=93.04 E-value=0.095 Score=44.52 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=26.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~-G~~V~~~d~ 179 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM-GAKVIAYDV 179 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CeEEEEecCHHHHHHHHHHhhC-CCEEEEECC
Confidence 5899999999999999999877 588877754
No 171
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=93.02 E-value=0.09 Score=43.74 Aligned_cols=31 Identities=19% Similarity=0.438 Sum_probs=26.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++.+.+.
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~dr 155 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL-GAQVRGFSR 155 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998876 488877653
No 172
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.01 E-value=0.11 Score=42.19 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=25.8
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+ |.+|+.+++.|...+ ++|+..+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~ 42 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA-HHLAAIE 42 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS-SEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEE
Confidence 369999999 999999999998774 7776553
No 173
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=93.00 E-value=0.097 Score=44.08 Aligned_cols=31 Identities=19% Similarity=0.456 Sum_probs=26.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++++.+.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d~ 176 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF-GAKVIAYDP 176 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998876 488776653
No 174
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=93.00 E-value=0.2 Score=41.41 Aligned_cols=88 Identities=23% Similarity=0.291 Sum_probs=56.7
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEE-EEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELV-AVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv-~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
..+++|.|+ |+.|+.+++.+.+. +++++ ++| |. .. ++. +.| ++++.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~-g~~~V~~Vn-P~-------------~~-------------g~~--i~G--~~vy~ 60 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC-GTKIVGGVT-PG-------------KG-------------GQN--VHG--VPVFD 60 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT-TCCEEEEEC-TT-------------CT-------------TCE--ETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCeEEEEeC-CC-------------CC-------------Cce--ECC--EeeeC
Confidence 367899999 99999999998886 57755 444 41 00 000 122 22221
Q ss_pred ecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE-eC
Q 029788 81 VRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (188)
Q Consensus 81 ~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi-s~ 125 (188)
+.++++- +.++|+++.+++.....+.++..+++|.+.+|+ +.
T Consensus 61 --sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 61 --TVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp --SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred --CHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2333321 115899999998888888888888999985554 54
No 175
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.99 E-value=0.088 Score=41.84 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~ 26 (188)
|+ +||+|+|+|.+|+.+++.|.+..
T Consensus 1 M~-~~i~iIG~G~mG~~~a~~l~~~g 25 (247)
T 3gt0_A 1 MD-KQIGFIGCGNMGMAMIGGMINKN 25 (247)
T ss_dssp CC-CCEEEECCSHHHHHHHHHHHHTT
T ss_pred CC-CeEEEECccHHHHHHHHHHHhCC
Confidence 54 79999999999999999998774
No 176
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=92.96 E-value=0.099 Score=44.52 Aligned_cols=31 Identities=29% Similarity=0.468 Sum_probs=26.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|++.+.
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d~ 191 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF-GMNVLVWGR 191 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEECC
Confidence 5899999999999999999877 588877753
No 177
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.94 E-value=0.27 Score=45.71 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=25.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.||||+|+|.+|..+...+... +++|+..+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-NYPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-CCEEEEEE
Confidence 5899999999999999998877 47776664
No 178
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.88 E-value=0.17 Score=37.12 Aligned_cols=31 Identities=32% Similarity=0.458 Sum_probs=26.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|.|.|+|++|+.+++.|.... .+++.+..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG-HSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEEC
Confidence 68999999999999999998874 68877754
No 179
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=92.88 E-value=0.11 Score=44.07 Aligned_cols=30 Identities=30% Similarity=0.426 Sum_probs=25.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... +++|.+.+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~-G~~V~~~d 201 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF-GMSVRYWN 201 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEc
Confidence 6899999999999999998876 47876654
No 180
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=92.86 E-value=0.29 Score=40.54 Aligned_cols=88 Identities=18% Similarity=0.262 Sum_probs=56.9
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEE-EEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEe
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELV-AVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFG 80 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv-~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~ 80 (188)
+.+++|.|+ |+.|+.+++.+.+. +++++ +|| |. .. ++. +.| ++++.
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~-g~~~v~~Vn-P~-------------~~-------------g~~--i~G--~~vy~ 60 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEY-GTKVVAGVT-PG-------------KG-------------GSE--VHG--VPVYD 60 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEEC-TT-------------CT-------------TCE--ETT--EEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC-CCcEEEEeC-CC-------------CC-------------Cce--ECC--EeeeC
Confidence 468899999 99999999998876 57755 444 41 00 000 112 12221
Q ss_pred ecCCCCCCCcCCC-ccEEEeecCCccCHhhHHHHHhCCCcEEEE-eC
Q 029788 81 VRNPEEIPWAETG-AEYVVESTGVFTDKDKAAAHLKGGAKKVII-SA 125 (188)
Q Consensus 81 ~~~p~~~~w~~~~-vdiV~e~tg~~~~~~~~~~~l~aGak~vvi-s~ 125 (188)
+.++++- +.+ +|+++.+++.....+.++...++|.+.+|+ |.
T Consensus 61 --sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 61 --SVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp --SHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred --CHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 2333321 113 899999999888888888889999985554 54
No 181
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=92.85 E-value=0.11 Score=43.88 Aligned_cols=31 Identities=32% Similarity=0.520 Sum_probs=26.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~-G~~V~~~d~ 196 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF-GMKTIGYDP 196 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998876 488877753
No 182
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=92.79 E-value=0.11 Score=43.90 Aligned_cols=30 Identities=30% Similarity=0.475 Sum_probs=25.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.++||+|+|+||+.+++.+..- ++++.+.+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f-g~~v~~~d 171 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF-GMKVLCYD 171 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred cEEEEECcchHHHHHHHhhccc-CceeeecC
Confidence 5799999999999999998877 48887664
No 183
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=92.77 E-value=0.12 Score=43.99 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=26.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... +++|.+.+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~d 198 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF-GFNVLFYD 198 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999999876 58887765
No 184
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=92.74 E-value=0.12 Score=43.27 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=26.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|++.+.
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d~ 177 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF-DMDIDYFDT 177 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999999876 488877764
No 185
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=92.73 E-value=0.1 Score=44.43 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=26.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~-G~~V~~~dr 195 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF-GCNLLYHDR 195 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCEEEEECS
T ss_pred CEEeEEEeCHHHHHHHHHHHHC-CCEEEEeCC
Confidence 5899999999999999999876 588777653
No 186
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.70 E-value=0.097 Score=42.48 Aligned_cols=29 Identities=28% Similarity=0.594 Sum_probs=24.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~I 33 (188)
+||+|+|+|.+|+.+++.|...+ .++...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g-~~V~~~ 34 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAG-YSLVVS 34 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEE
T ss_pred ceEEEECchHHHHHHHHHHHhCC-CEEEEE
Confidence 69999999999999999998774 676444
No 187
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=92.66 E-value=0.091 Score=43.56 Aligned_cols=31 Identities=32% Similarity=0.529 Sum_probs=26.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF-GMRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhh-CcEEEEEec
Confidence 5899999999999999998866 588888754
No 188
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.63 E-value=0.14 Score=41.66 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=27.5
Q ss_pred CC-cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~-~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|| +.||+|+|+|.+|+.+++.+... +++|+.. |.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~-G~~V~l~-d~ 35 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFH-GFAVTAY-DI 35 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHT-TCEEEEE-CS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-CCeEEEE-eC
Confidence 54 46899999999999999999887 4777655 54
No 189
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=92.59 E-value=0.11 Score=44.50 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=26.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f-G~~V~~~d~ 207 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF-RARIRVFDP 207 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS-CCEEEEECS
T ss_pred CEEEEecCCcccHHHHHhhhhC-CCEEEEECC
Confidence 5899999999999999988766 588877653
No 190
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=92.58 E-value=0.12 Score=43.06 Aligned_cols=31 Identities=32% Similarity=0.550 Sum_probs=26.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++.+.+.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d~ 175 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF-GMRVVYHAR 175 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999999877 488877654
No 191
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=92.55 E-value=0.095 Score=44.16 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=26.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|++.+.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~-G~~V~~~d~ 176 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW-GATLQYHEA 176 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS-CCEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEECC
Confidence 6899999999999999988766 588877654
No 192
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=92.55 E-value=0.19 Score=36.10 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=30.4
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+.++.|+|+|..|+.+++.+..+++++++++-|.
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~ 37 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDD 37 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 4689999999999999999987778999999875
No 193
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.54 E-value=1.4 Score=35.59 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=27.5
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.++|.|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHG-YKVRGTAR 43 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 468999999 999999999999874 78887765
No 194
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.54 E-value=0.13 Score=41.09 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=26.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+||+|+|+|++|+.+++.+... ++++|.+.|.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeC
Confidence 6899999999999999988876 4675666665
No 195
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=92.52 E-value=0.29 Score=42.76 Aligned_cols=34 Identities=24% Similarity=0.555 Sum_probs=30.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
..+|+|-|||.+|+.+++.|.+. +.++|+|.|..
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~-GakVVavsD~~ 254 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDA-GAKVIGISDAN 254 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCEEEEEECSS
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCC
Confidence 36899999999999999998877 58999999975
No 196
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.49 E-value=0.12 Score=43.00 Aligned_cols=36 Identities=31% Similarity=0.420 Sum_probs=30.0
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+++||.|.|. |.||+.+++.|.++++.+|+++...
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 45679999999 9999999999998755888888754
No 197
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.46 E-value=0.13 Score=40.24 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=25.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++||+|+|+|.+|+.+++.|...+ .+++..+.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG-FKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 368999999999999999998774 67666543
No 198
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.45 E-value=0.15 Score=42.39 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=25.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+....+|+..+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~d 55 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYD 55 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEe
Confidence 47999999999999999999877316766554
No 199
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.41 E-value=0.12 Score=43.13 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=26.3
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
|+++||+|+|+|.+|..+...|.+.. .+|..+.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g-~~V~~~~ 33 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAG-EAINVLA 33 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCC-CEEEEEE
Confidence 66689999999999999999888764 5666554
No 200
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=92.35 E-value=0.14 Score=42.64 Aligned_cols=31 Identities=35% Similarity=0.582 Sum_probs=26.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d~ 173 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL-GMNILLYDP 173 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEEccCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999999877 488877654
No 201
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=92.31 E-value=0.14 Score=43.13 Aligned_cols=31 Identities=16% Similarity=0.395 Sum_probs=26.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++.+.+.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~-G~~V~~~d~ 177 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF-GAKVITYDI 177 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999999876 488877654
No 202
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=92.26 E-value=0.15 Score=43.19 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=26.0
Q ss_pred ceEEEEccCHHHHHHHHHHH-cCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVIL-QRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~-~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+. .. +++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~-G~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL-GMKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc-CCEEEEECC
Confidence 58999999999999999988 66 488776653
No 203
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.25 E-value=0.17 Score=40.24 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=26.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+||||+|+|.+|+.+++.|.+.. .+|+..+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 479999999999999999998874 77766643
No 204
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.21 E-value=0.13 Score=41.81 Aligned_cols=30 Identities=33% Similarity=0.600 Sum_probs=25.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEE
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~I 33 (188)
++||+|+|+|.+|+.+++.|... +++++..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~ 33 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE-GVTVYAF 33 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT-TCEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCeEEEE
Confidence 47999999999999999998876 4776544
No 205
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.21 E-value=0.14 Score=42.61 Aligned_cols=31 Identities=35% Similarity=0.529 Sum_probs=26.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++++.+.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~-G~~V~~~d~ 173 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM-GMKVLAYDI 173 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEECC
Confidence 6899999999999999999877 488877653
No 206
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.13 E-value=0.14 Score=44.08 Aligned_cols=30 Identities=20% Similarity=0.374 Sum_probs=25.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... +++|.+.+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d 149 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL-GIRTLLCD 149 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999999877 58877664
No 207
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.10 E-value=0.16 Score=41.66 Aligned_cols=31 Identities=26% Similarity=0.449 Sum_probs=26.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~d 37 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG-LSTWGAD 37 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CeEEEEE
Confidence 479999999999999999998874 7776664
No 208
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.08 E-value=0.17 Score=41.63 Aligned_cols=31 Identities=19% Similarity=0.478 Sum_probs=26.3
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~d 51 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNG-FKVTVWN 51 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CeEEEEe
Confidence 479999999999999999998874 7776654
No 209
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.08 E-value=0.12 Score=40.09 Aligned_cols=30 Identities=30% Similarity=0.348 Sum_probs=26.3
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||.|.|+|++|+.+++.|.++ +.+++.+..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~ 31 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINK 31 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEEC
Confidence 899999999999999999887 478888864
No 210
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.07 E-value=0.15 Score=43.96 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=25.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... ++++.+.+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~-G~~V~~~d 146 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL-GWKVLVCD 146 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHC-CCEEEEEc
Confidence 6899999999999999999876 58876653
No 211
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.01 E-value=0.14 Score=38.44 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=26.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcC-CCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~-~~~~vv~Ind 35 (188)
.+|.|.|+|++|+.+++.|.+. . .+++.+..
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~ 71 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIEI 71 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEEC
Confidence 5899999999999999998765 4 67777754
No 212
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.99 E-value=0.15 Score=44.16 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.++||+|+|+||+.+.+.+... ++++.+.+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~-G~~V~~~d 175 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL-GMYVYFYD 175 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeECHHHHHHHHHHHHC-CCEEEEEc
Confidence 5899999999999999999877 48887664
No 213
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.96 E-value=0.14 Score=43.24 Aligned_cols=30 Identities=33% Similarity=0.457 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... +++|...+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~d 194 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF-DCPISYFS 194 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998876 47776554
No 214
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.94 E-value=0.18 Score=41.83 Aligned_cols=33 Identities=36% Similarity=0.484 Sum_probs=24.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|||+|+|+|.||+.+.-.|..++-+.=+.+-|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999999887776654432344455
No 215
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=91.94 E-value=0.15 Score=42.81 Aligned_cols=31 Identities=32% Similarity=0.514 Sum_probs=26.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|++.+.
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~ 186 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF-GVQRFLYTG 186 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCCEEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998876 478777763
No 216
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.86 E-value=1.2 Score=36.61 Aligned_cols=30 Identities=20% Similarity=0.422 Sum_probs=24.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEE
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~I 33 (188)
++||+|+|+|.+|..+...|.+.. .+|..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG-HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT-CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC-CeEEEE
Confidence 479999999999999999888764 676666
No 217
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.86 E-value=0.14 Score=42.99 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+||+|+|+|.+|..+...|... +.+|..++.
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r 46 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK-CREVCVWHM 46 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT-EEEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEC
Confidence 3999999999999999988866 467666543
No 218
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.79 E-value=0.15 Score=44.94 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=26.9
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
|.++||||+|+|.+|+.+++.|.+.. ++|...+
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~d 35 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRG-YTVAIYN 35 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCC-CEEEEEc
Confidence 54579999999999999999998774 6765554
No 219
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.75 E-value=0.37 Score=40.03 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=24.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
++||+|+|+|.||..++..+...+-+ +++.+ |.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~-Di 39 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLI-DA 39 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE-CS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 47999999999999998887765422 45444 54
No 220
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.70 E-value=0.26 Score=39.09 Aligned_cols=31 Identities=29% Similarity=0.514 Sum_probs=25.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+||+|+|+|.+|+.+++.|...+ .++ .+.|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v-~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HEL-IISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEE-EEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeE-EEECC
Confidence 69999999999999999988764 454 55554
No 221
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=91.69 E-value=0.16 Score=42.67 Aligned_cols=31 Identities=35% Similarity=0.563 Sum_probs=26.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... ++++.+.+.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~-G~~V~~~d~ 177 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF-GVKLYYWSR 177 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEECC
Confidence 5899999999999999998876 478776653
No 222
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.68 E-value=0.18 Score=42.37 Aligned_cols=31 Identities=29% Similarity=0.498 Sum_probs=26.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~-G~~V~~~d~ 181 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF-NMRILYYSR 181 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEECC
Confidence 5899999999999999999876 478776653
No 223
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=91.63 E-value=1.9 Score=38.48 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=29.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
.+|+|-|||.+|+.+++.|.+. +.++|+|.|..
T Consensus 245 ~tVaVQG~GNVG~~aa~~L~e~-GakVVavsDs~ 277 (501)
T 3mw9_A 245 KTFVVQGFGNVGLHSMRYLHRF-GAKCITVGESD 277 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEEcCC
Confidence 6899999999999999999887 58999998853
No 224
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=91.62 E-value=0.21 Score=40.21 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCC-CceEEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRD-DVELVAV 33 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~-~~~vv~I 33 (188)
+||+|+|+|.+|+.+++.|.... ..+|+..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~ 32 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGY 32 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEE
Confidence 48999999999999999988764 1266554
No 225
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.61 E-value=0.27 Score=36.82 Aligned_cols=34 Identities=26% Similarity=0.281 Sum_probs=29.0
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+.++|.|.|. |.||+.+++.|.+++ .+++++..
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r 35 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVR 35 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Confidence 65579999999 999999999999884 78888765
No 226
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.60 E-value=0.15 Score=42.33 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=25.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCC---ceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDD---VELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~---~~vv~In 34 (188)
++||+|+|+|.+|..+.+.|.+... .+|+..+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~ 56 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASS 56 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEEC
Confidence 5799999999999999999887631 5665554
No 227
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=91.56 E-value=0.17 Score=43.83 Aligned_cols=31 Identities=32% Similarity=0.422 Sum_probs=26.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||+|+|+||+.+++.+... +++|.+.+.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~-G~~V~~~d~ 222 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF-DVHLHYTDR 222 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-TCEEEEECS
T ss_pred CEEEEEeECHHHHHHHHHHHhC-CCEEEEEcC
Confidence 5899999999999999998876 488877653
No 228
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.49 E-value=0.18 Score=41.32 Aligned_cols=30 Identities=27% Similarity=0.402 Sum_probs=24.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||+|+|+|.+|+.+++.|.... .++...+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG-HTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCC-CEEEEEe
Confidence 78999999999999999988764 6765553
No 229
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.47 E-value=0.63 Score=38.50 Aligned_cols=135 Identities=14% Similarity=0.129 Sum_probs=69.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|+|+|.+|...++.+......+++++.. +.+.+.++.++ |. . -.++ ...+
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~l----Ga----~--------~~i~-------~~~~ 226 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREV----GA----D--------AAVK-------SGAG 226 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHT----TC----S--------EEEE-------CSTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHc----CC----C--------EEEc-------CCCc
Confidence 46999999999999998887664567777754 23433333321 11 0 0010 0000
Q ss_pred C-CCC-CC-cCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCCCCcEEEcCChhhHhHH
Q 029788 84 P-EEI-PW-AETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 84 p-~~~-~w-~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la 160 (188)
. +.+ .+ ...++|+||||+|...+.+.+-..++.|- ++++-+.....+.- ++...+..+..+...-.-+...+.
T Consensus 227 ~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G-~iv~~G~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~ 302 (345)
T 3jv7_A 227 AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDG-HISVVGIHAGAHAK---VGFFMIPFGASVVTPYWGTRSELM 302 (345)
T ss_dssp HHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEE-EEEECSCCTTCCEE---ESTTTSCTTCEEECCCSCCHHHHH
T ss_pred HHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCC-EEEEECCCCCCCCC---cCHHHHhCCCEEEEEecCCHHHHH
Confidence 0 000 00 11379999999997644555556665554 34443332221222 232333323344444333445666
Q ss_pred HHHHHHHH
Q 029788 161 PLAKVIHD 168 (188)
Q Consensus 161 ~~lk~l~~ 168 (188)
.+++.+.+
T Consensus 303 ~~~~l~~~ 310 (345)
T 3jv7_A 303 EVVALARA 310 (345)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 67776654
No 230
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.37 E-value=0.19 Score=41.44 Aligned_cols=31 Identities=23% Similarity=0.557 Sum_probs=26.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+.. ++|+..+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~d 39 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG-KRVAIWN 39 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEe
Confidence 468999999999999999998874 7776654
No 231
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=91.36 E-value=0.23 Score=38.11 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=27.4
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHH-cCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVIL-QRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~-~~~~~~vv~Ind 35 (188)
|||.+|.|.|+ |.||+.+++.|. ++ +.+|+++..
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r 38 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYT-DMHITLYGR 38 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHC-CCEEEEEES
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcC-CceEEEEec
Confidence 34345999998 999999999998 55 578888765
No 232
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.29 E-value=0.19 Score=41.08 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=25.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+. +++|+..+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~d 45 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-PGGVTVYD 45 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-TTCEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-CCeEEEEe
Confidence 46999999999999999998877 47776664
No 233
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.25 E-value=0.24 Score=40.56 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=26.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|+|+|+|+||+.+++.+.... +++...+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 58999999999999999998774 68776654
No 234
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.21 E-value=0.15 Score=40.94 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||+|+|+|.+|+.+.+.|.. +.+++..+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~~~~ 30 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTLVWN 30 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEEEEe
Confidence 489999999999999998887 47765553
No 235
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.21 E-value=1.1 Score=35.69 Aligned_cols=30 Identities=20% Similarity=0.207 Sum_probs=24.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|-|+|.|.+|...++.|.+.+ -+|+.|+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G-A~VtVva 61 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG-AAITVVA 61 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC-CCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEC
Confidence 68999999999999999998874 5555554
No 236
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.18 E-value=0.19 Score=40.98 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=26.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
|+||+|+|+|.+|+.+.+.|.+.. ++++..+
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d 33 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG-YLLNVFD 33 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC-CeEEEEc
Confidence 369999999999999999998874 7776663
No 237
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.15 E-value=0.21 Score=41.43 Aligned_cols=31 Identities=29% Similarity=0.313 Sum_probs=25.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+. +++|+..+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~d 61 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA-GYALQVWN 61 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhC-CCeEEEEc
Confidence 36999999999999999999887 47776554
No 238
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.02 E-value=0.18 Score=41.74 Aligned_cols=31 Identities=26% Similarity=0.484 Sum_probs=24.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
++||||+|+|.+|+.+.+.|.+.. + +|+..+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG-AIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS-CCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC-CCeEEEEc
Confidence 479999999999999999998774 6 655443
No 239
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.93 E-value=0.19 Score=44.59 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=27.4
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|.++||||+|+|.+|+.+++.|.+.. ++|+..+.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G-~~V~v~dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHG-FVVCAFNR 35 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCC-CEEEEEeC
Confidence 44579999999999999999998874 77766643
No 240
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=90.86 E-value=0.49 Score=39.28 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=27.1
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcC-CCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~-~~~~vv~Ind 35 (188)
..+|-|-|. |.||+.+++.|.++ +..+|+.+..
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 468999999 99999999999887 4337777765
No 241
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.83 E-value=0.2 Score=44.24 Aligned_cols=34 Identities=32% Similarity=0.445 Sum_probs=27.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|.+.||||+|+|.+|+.+.+.|.+. +++|+..|.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-GYTVSIFNR 46 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECS
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeC
Confidence 5578999999999999999999877 477766654
No 242
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.82 E-value=0.24 Score=43.24 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=26.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... +++|.+.+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~-G~~V~~yd 186 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL-GMTVRYYD 186 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998877 58887765
No 243
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.81 E-value=0.28 Score=40.25 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=26.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|+|+|+|+||+.+++.+.... ++|...+.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 68999999999999999998774 78776654
No 244
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.80 E-value=0.14 Score=41.30 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=25.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||+|+|+|.+|+.+++.|... +.+++..+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-GHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-TCEEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCEEEEEc
Confidence 6999999999999999998876 47776554
No 245
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=90.67 E-value=0.2 Score=42.71 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=25.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCce-EEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~-vv~In 34 (188)
.+|||+|+|+||+.+++.+... +++ |.+.+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~-G~~~V~~~d 195 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF-NPKELLYYD 195 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG-CCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCcEEEEEC
Confidence 5899999999999999998866 475 77665
No 246
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.50 E-value=0.33 Score=40.20 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=26.8
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+ +||+|+|+|.+|..++..+...+.++ +.+-|.
T Consensus 1 M~-~kI~VIGaG~vG~~~a~~la~~g~~~-v~L~Di 34 (309)
T 1ur5_A 1 MR-KKISIIGAGFVGSTTAHWLAAKELGD-IVLLDI 34 (309)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCSE-EEEECS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHCCCCe-EEEEeC
Confidence 54 79999999999999998888776457 566665
No 247
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.35 E-value=0.32 Score=37.76 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=24.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|+.+.+.|.+.. .++..++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g-~~V~~~~ 49 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG-HEVTYYG 49 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEc
Confidence 368999999999999999988764 6665553
No 248
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.34 E-value=1.2 Score=36.88 Aligned_cols=30 Identities=17% Similarity=0.250 Sum_probs=24.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||...++.+.... . +|+++.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 198 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLG-AGRIFAVG 198 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT-CSSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CcEEEEEC
Confidence 46999999999999999887764 5 676664
No 249
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.33 E-value=0.72 Score=38.24 Aligned_cols=128 Identities=13% Similarity=0.231 Sum_probs=69.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|+|+|.||...++.+.... .+++++... .+.+.++.+ .|. + ..+ .+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~---~~~~~~~~~----lGa-----------~-~v~----------~~ 227 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARN---EHKKQDALS----MGV-----------K-HFY----------TD 227 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEECSS---STTHHHHHH----TTC-----------S-EEE----------SS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCC---HHHHHHHHh----cCC-----------C-eec----------CC
Confidence 47999999999999999888774 688777532 222223322 110 0 111 12
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCC-CCCCeEEeecCc-cCc-CCCCcEEEcCChhhHhHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPS-KDAPMFVVGVNE-HEY-KPELNIVSNASCTTNCLA 160 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps-~d~p~~V~gvN~-~~~-~~~~~ivs~~sCtT~~la 160 (188)
++.+ .+ ++|+||||+|...+.+.+-..++.|-+-+.+..+. ...+. +|. +.+ ..+..+...-..+...+.
T Consensus 228 ~~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~----~~~~~~~~~~~~~i~g~~~~~~~~~~ 300 (348)
T 3two_A 228 PKQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPV----LSVFDFIHLGNRKVYGSLIGGIKETQ 300 (348)
T ss_dssp GGGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCE----EEHHHHHHTCSCEEEECCSCCHHHHH
T ss_pred HHHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCccc----CCHHHHHhhCCeEEEEEecCCHHHHH
Confidence 3322 22 89999999997755555555554444333333332 22221 121 111 223455555444555677
Q ss_pred HHHHHHHH
Q 029788 161 PLAKVIHD 168 (188)
Q Consensus 161 ~~lk~l~~ 168 (188)
.+++.+.+
T Consensus 301 ~~~~l~~~ 308 (348)
T 3two_A 301 EMVDFSIK 308 (348)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77776654
No 250
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.22 E-value=0.79 Score=38.23 Aligned_cols=32 Identities=31% Similarity=0.515 Sum_probs=24.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
|||+|+|+|.+|..++..+..++-+ +++ +-|.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~-l~D~ 33 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVV-MVDI 33 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEE-EEeC
Confidence 3899999999999999888876533 444 4454
No 251
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.15 E-value=0.32 Score=39.32 Aligned_cols=30 Identities=23% Similarity=0.451 Sum_probs=25.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||+|+|+|.+|+.+.+.|.+.. .+|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG-CSVTIWN 31 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CeEEEEc
Confidence 59999999999999999998874 7776553
No 252
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.12 E-value=0.99 Score=38.04 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=24.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
.||+|+|+|.+|..++..+..++-+ ++ .+-|.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev-~L~Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEV-ALVDV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEE-EEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEEC
Confidence 6999999999999999888877533 44 44455
No 253
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.07 E-value=0.22 Score=43.90 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=30.8
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCC-CceEEEEeCCCCChhhhhhh
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~-~~~vv~Ind~~~~~~~~a~l 46 (188)
|++||+|+|+|.+|..+...|.+.. +.+|+.++ . +.+.+..+
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D-~--~~~~v~~l 50 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD-M--NTAKIAEW 50 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC-S--CHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE-C--CHHHHHHH
Confidence 3479999999999999998887662 57887774 3 44444343
No 254
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.01 E-value=0.18 Score=40.86 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=25.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||+|+|+|.+|+.+.+.|.+.. .+|+..+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d 31 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG-FDVTVWN 31 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT-CCEEEEC
T ss_pred CeEEEEccCHHHHHHHHHHHHCC-CeEEEEc
Confidence 49999999999999999988764 6766654
No 255
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.94 E-value=0.3 Score=41.49 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=25.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
|| +||+|+|+|.+|..+...|....+.+|+.+.
T Consensus 1 ~~-mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 1 MT-VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp -C-EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred CC-ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 54 6999999999999999888664357777664
No 256
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.88 E-value=0.35 Score=38.75 Aligned_cols=29 Identities=38% Similarity=0.575 Sum_probs=24.5
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
||+|+|+|.+|+.+++.|.... .+++.++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 30 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG-HYLIGVS 30 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 8999999999999999988774 6766653
No 257
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.82 E-value=0.4 Score=38.73 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=28.4
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|| +||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (311)
T 3m2p_A 1 MS-LKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRS 35 (311)
T ss_dssp -C-CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 54 79999999 999999999999884 788888653
No 258
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=89.72 E-value=0.25 Score=43.33 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=27.2
Q ss_pred CC-cceEEEEccCHHHHHHHHHHHcCC-CceEEEEe
Q 029788 1 MG-KVKIGINGFGRIGRLVARVILQRD-DVELVAVN 34 (188)
Q Consensus 1 m~-~~~vaInG~GrIGr~~lr~l~~~~-~~~vv~In 34 (188)
|+ ++||+|+|+|.+|..+...|.+.. +.+|+.++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d 37 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVD 37 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 479999999999999999888662 57877764
No 259
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.65 E-value=0.34 Score=42.36 Aligned_cols=41 Identities=15% Similarity=0.366 Sum_probs=30.4
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhh
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~l 46 (188)
|+ +||+|+|+|.+|..+...|.+. +.+|+.++ . +.+.+..+
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~-G~~V~~~D-~--~~~~v~~l 41 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAEL-GANVRCID-T--DRNKIEQL 41 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC-S--CHHHHHHH
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhc-CCEEEEEE-C--CHHHHHHH
Confidence 54 7999999999999999999887 47887664 3 45544444
No 260
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.62 E-value=0.22 Score=41.44 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=20.9
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQR 25 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~ 25 (188)
|+++||+|+|+|.+|..+...|...
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhc
Confidence 5457999999999999999888765
No 261
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.43 E-value=0.39 Score=39.65 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=26.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+ +||+|+|+|.+|..+...|.+.. .+|..+..
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (320)
T 3i83_A 1 MS-LNILVIGTGAIGSFYGALLAKTG-HCVSVVSR 33 (320)
T ss_dssp ---CEEEEESCCHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 54 79999999999999998888764 67777754
No 262
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=89.33 E-value=0.44 Score=41.18 Aligned_cols=43 Identities=23% Similarity=0.297 Sum_probs=34.1
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCC-ceEEEEeCCCCChhhhhhh
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~-~~vv~Ind~~~~~~~~a~l 46 (188)
.||.|.|. |-||++.++.+..+|+ |+|+++..-....+.++..
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aLaa~g~nv~~L~~q 66 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGGAHLDTLLRQ 66 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTTEEEEEEEECSSCHHHHHHH
T ss_pred eEEEEEccCcHHHHHHHHHHHhCCCceEEEEEEecCCCHHHHHHH
Confidence 58999999 9999999999998875 9999998722355544433
No 263
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=89.29 E-value=0.57 Score=36.10 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCC-CceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~-~~~vv~Ind 35 (188)
|++++|.|.|. |.||+.+++.|.+++ +.+|+.+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 44578999999 999999999999884 578888765
No 264
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.26 E-value=0.51 Score=36.04 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=25.5
Q ss_pred eEEEEc-cCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGING-FGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||+|.| +|.+|+.+++.|.++. .+++.++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLG-HEIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTT-CEEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 899999 8999999999998774 78777654
No 265
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.19 E-value=0.3 Score=40.22 Aligned_cols=30 Identities=37% Similarity=0.605 Sum_probs=25.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.|||++|+|.+|+.+.+.|.+. +++++.-|
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-GYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEC-
T ss_pred CcEEEEecHHHHHHHHHHHHHC-CCeEEEEe
Confidence 6999999999999999999987 48876554
No 266
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=89.12 E-value=1.8 Score=36.77 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=24.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||...++.+.... . +++++.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 245 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAG-ASKVILSE 245 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 36999999999999999888774 6 777764
No 267
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.12 E-value=0.38 Score=40.01 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=25.3
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+++||+|+|+|.+|..++..+..++-+.-+.+-|.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45799999999999998888776643333344454
No 268
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.10 E-value=0.33 Score=42.05 Aligned_cols=38 Identities=29% Similarity=0.664 Sum_probs=30.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhh
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTY 45 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ 45 (188)
.+|.|.|+|++|+.+++.|.++ +.+++.|.. +++.+..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~---d~~~v~~ 42 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS-GVKMVVLDH---DPDHIET 42 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEEC---CHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHH
Confidence 5799999999999999999987 488888854 4554433
No 269
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.10 E-value=0.44 Score=42.52 Aligned_cols=30 Identities=40% Similarity=0.622 Sum_probs=26.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|||+|+|+||+.+++.+... ++++++.+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~-G~~V~~~d 172 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF-GAYVVAYD 172 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEC
Confidence 6899999999999999999877 48887764
No 270
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.96 E-value=0.49 Score=38.56 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=25.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+.||+|+|+|.+|..++..+... +++|+.++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~~~d 45 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVLVD 45 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEEE
Confidence 36899999999999999988877 47876554
No 271
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.86 E-value=0.45 Score=41.71 Aligned_cols=40 Identities=23% Similarity=0.388 Sum_probs=30.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhh
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~l 46 (188)
.|||-|.|+|++|+.+++.|.+. +.+++.|.. +++.+-.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~---d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDK---DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEES---CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEC---CHHHHHHH
Confidence 46999999999999999998776 478888854 45544443
No 272
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.84 E-value=0.42 Score=39.10 Aligned_cols=30 Identities=30% Similarity=0.522 Sum_probs=24.7
Q ss_pred ceEEEEc-cCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGING-FGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG-~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.||+|+| +|.+|..+.+.|.... .++..++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~ 52 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASG-YPISILD 52 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEE
Confidence 5899999 9999999999998764 6665553
No 273
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=88.78 E-value=0.5 Score=40.95 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=34.5
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCC-ceEEEEeCCCCChhhhhhh
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~-~~vv~Ind~~~~~~~~a~l 46 (188)
|.+|.|.|. |-||...++.+..+|+ |+|+++..- ...+.++-.
T Consensus 9 ~k~i~ILGSTGSIGtqtLdVi~~~pd~f~V~aL~ag-~nv~~L~~q 53 (406)
T 1q0q_A 9 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG-KNVTRMVEQ 53 (406)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES-SCHHHHHHH
T ss_pred ceeEEEEccCcHHHHHHHHHHHhCCCccEEEEEEcC-CCHHHHHHH
Confidence 369999999 9999999999998875 999999873 455554433
No 274
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.66 E-value=0.53 Score=39.39 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=26.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|+++||+|+|+|.+|..++..+..++-.+++-+ |.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~-Di 37 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLF-DI 37 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEE-CS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEE-eC
Confidence 656899999999999999988877652265444 54
No 275
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=88.59 E-value=0.62 Score=40.57 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=30.3
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPF 37 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~ 37 (188)
..+|+|.|||-+|+.+++.|.++.+.++|+|.|..
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~ 243 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQELGSKVVAVSDSR 243 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 36899999999999999999883369999999973
No 276
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.42 E-value=0.51 Score=37.61 Aligned_cols=30 Identities=23% Similarity=0.334 Sum_probs=25.3
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||+|+|+|.+|..+.+.|.+.. .+|..++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r 31 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQG-HEVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CCEEEEEc
Confidence 8999999999999999988774 67766654
No 277
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=88.37 E-value=0.41 Score=42.23 Aligned_cols=44 Identities=16% Similarity=0.181 Sum_probs=33.5
Q ss_pred CcceEEEEcc-CHHHHHHHHHHHc---CC-CceEEEEeCCCCChhhhhhh
Q 029788 2 GKVKIGINGF-GRIGRLVARVILQ---RD-DVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 2 ~~~~vaInG~-GrIGr~~lr~l~~---~~-~~~vv~Ind~~~~~~~~a~l 46 (188)
+|.||.|.|. |-||...++.+.+ +| .|+|+++..- ...+.++..
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg-~Nv~lL~eQ 124 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVN-KSVNELYEQ 124 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEES-SCHHHHHHH
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcC-CCHHHHHHH
Confidence 3468999999 9999999999887 44 5999999863 355554433
No 278
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.34 E-value=0.32 Score=39.50 Aligned_cols=33 Identities=21% Similarity=0.436 Sum_probs=25.4
Q ss_pred cceEEEEccCHHHHHHHHHHHcCC----C-ceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRD----D-VELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~----~-~~vv~Ind 35 (188)
++||+|+|+|.+|..+...|.+.+ + .+|+.++.
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 369999999999999998887651 3 57666643
No 279
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=88.22 E-value=0.5 Score=37.45 Aligned_cols=30 Identities=30% Similarity=0.576 Sum_probs=24.8
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||+|+|+|.+|+.+.+.|.+.. ++|+. .+.
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g-~~V~~-~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRG-VEVVT-SLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEE-CCT
T ss_pred eEEEEechHHHHHHHHHHHHCC-CeEEE-eCC
Confidence 8999999999999999998774 67665 443
No 280
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=87.97 E-value=0.093 Score=40.86 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=24.4
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+||+|+|+|.+|+.+++.|.+.. .++...+
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G-~~V~~~~ 49 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG-YSVVFGS 49 (201)
Confidence 468999999999999999887663 5555443
No 281
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.18 E-value=0.53 Score=38.97 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=26.3
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|++||+|+|+|.+|..+.+.|.+.. .+|...+.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENG-EEVILWAR 45 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEeC
Confidence 3589999999999999999988764 67665553
No 282
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.17 E-value=0.64 Score=35.14 Aligned_cols=31 Identities=35% Similarity=0.458 Sum_probs=27.4
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG-HEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcC
Confidence 8999999 999999999999885 888888763
No 283
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.17 E-value=0.46 Score=39.64 Aligned_cols=41 Identities=20% Similarity=0.144 Sum_probs=30.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
+.||||+|+|.+|..++..+... +++|+.. |. +++.+..+.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G~~V~l~-d~--~~~~~~~~~ 46 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-GFRVKLY-DI--EPRQITGAL 46 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCCEEEE-CS--CHHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-CCEEEEE-eC--CHHHHHHHH
Confidence 46899999999999999998877 4776655 54 455544443
No 284
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.14 E-value=0.31 Score=35.17 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.||+|+|+|.+|+.+++.|... +++ +.+.+.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~-g~~-v~v~~r 52 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP-QYK-VTVAGR 52 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT-TCE-EEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCE-EEEEcC
Confidence 5899999999999999988775 588 555554
No 285
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.96 E-value=0.35 Score=39.73 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=25.0
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+ +||+|+|+|.+|..+...|.... .+|..+..
T Consensus 1 M~-mkI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r 33 (312)
T 3hn2_A 1 MS-LRIAIVGAGALGLYYGALLQRSG-EDVHFLLR 33 (312)
T ss_dssp ----CEEEECCSTTHHHHHHHHHHTS-CCEEEECS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHCC-CeEEEEEc
Confidence 54 79999999999999998888764 56666654
No 286
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=87.92 E-value=1.7 Score=36.39 Aligned_cols=30 Identities=20% Similarity=0.264 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.+|...++.+.... . +++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 214 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAG-ATTVILST 214 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 47999999999999999888774 5 666653
No 287
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.91 E-value=0.29 Score=39.96 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=24.1
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+ +||+|+|+|.+|..+...|.+.. .+|..+..
T Consensus 1 M~-mkI~iiGaGa~G~~~a~~L~~~g-~~V~~~~r 33 (294)
T 3g17_A 1 MS-LSVAIIGPGAVGTTIAYELQQSL-PHTTLIGR 33 (294)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHHC-TTCEEEES
T ss_pred CC-cEEEEECCCHHHHHHHHHHHHCC-CeEEEEEe
Confidence 54 79999999999999988887653 45555543
No 288
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=87.80 E-value=0.39 Score=38.76 Aligned_cols=29 Identities=21% Similarity=0.552 Sum_probs=24.2
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
||+|+|+|.+|+.+.+.|.... +++...+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g-~~V~~~~ 30 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHG-YPLIIYD 30 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTT-CCEEEEC
T ss_pred eEEEEeccHHHHHHHHHHHHCC-CEEEEEe
Confidence 8999999999999999988764 6766553
No 289
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=87.79 E-value=0.46 Score=38.32 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=26.7
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEe
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~In 34 (188)
|+++||.|.|. |.||+.+++.|.+++ .+++.+.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLR 34 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEe
Confidence 66679999999 999999999998874 6666653
No 290
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.78 E-value=0.55 Score=35.01 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=26.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+..|+|+|+|..|-.++..|..+ +++++-+-.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek 33 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDK 33 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 48899999999999999888877 477766653
No 291
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=87.77 E-value=0.53 Score=38.24 Aligned_cols=35 Identities=31% Similarity=0.513 Sum_probs=27.8
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCC-CceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~-~~~vv~Ind 35 (188)
|+.+||-|-|. |.||+.+++.|.++. +.+|+++..
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 65579999999 999999999998764 478888754
No 292
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.60 E-value=0.72 Score=35.06 Aligned_cols=31 Identities=32% Similarity=0.427 Sum_probs=27.2
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG-HEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEec
Confidence 7999999 999999999999884 788888653
No 293
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=87.53 E-value=0.58 Score=41.64 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=25.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|+|+|+|+||+.+++.+... +++|+..+
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~-G~~V~v~d 307 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL-GATVWVTE 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHC-CCEEEEEe
Confidence 6899999999999999999877 48876654
No 294
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.49 E-value=0.17 Score=40.73 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=27.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+||+|+|+|.+|..+.+.|.+. +.+|+.++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~-G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV-GHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT-TCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC-CCEEEEecC
Confidence 47999999999999999999887 478877765
No 295
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=87.46 E-value=0.65 Score=39.59 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=27.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|.|||.||+.+++.+.+. +.+|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~-GakVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA-GAQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEE-EEeC
Confidence 5899999999999999999887 58888 8887
No 296
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.37 E-value=0.5 Score=37.36 Aligned_cols=31 Identities=13% Similarity=0.236 Sum_probs=23.5
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||+|+|+|.+|+.+.+.|......++. +.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~-~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIY-IANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEE-EECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEE-EECC
Confidence 899999999999999988765314554 4443
No 297
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=87.37 E-value=0.55 Score=38.78 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=29.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
.|||++|+|.+|+.+.+.|.+. +++++.-|. +++....+.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~-G~~v~v~dr---~~~~~~~l~ 43 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKA-GYLLNVFDL---VQSAVDGLV 43 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECS---SHHHHHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhC-CCeEEEEcC---CHHHHHHHH
Confidence 5999999999999999999987 477766553 344443443
No 298
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.33 E-value=0.68 Score=38.83 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=25.9
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
|+++||+|+|+|.+|..++..+..++ + +++-+ |.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~-~~~v~L~-Di 39 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKE-LGDVVLF-DI 39 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTT-CCEEEEE-CS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCC-CCeEEEE-eC
Confidence 65679999999999999988887764 4 65444 54
No 299
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.16 E-value=0.6 Score=39.20 Aligned_cols=31 Identities=19% Similarity=0.433 Sum_probs=25.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|+|.||+..++.+.... .+++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~ 219 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFG-SKVTVIST 219 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999999999999999888774 68777754
No 300
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.03 E-value=2.5 Score=35.14 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=25.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|+|.||...++.+.... .+++++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~ 211 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMG-AETYVISR 211 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEcC
Confidence 47999999999999998887664 67777764
No 301
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=86.98 E-value=0.92 Score=37.58 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=24.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||+..++.+.... . +++++.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~ 199 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASG-AYPVIVSE 199 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 37999999999999999888774 5 677664
No 302
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.86 E-value=0.59 Score=39.06 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=24.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||+|+|+|.+|+.+++.|.... ++++..+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G-~~V~~~~ 46 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG-VDVTVGL 46 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCc-CEEEEEE
Confidence 68999999999999999998774 6765443
No 303
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=86.80 E-value=0.66 Score=37.93 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=28.9
Q ss_pred CcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 2 GKVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 2 ~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+++||.|.|+ |.||+.+++.|.+++ .+|+++...
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 3579999999 999999999999884 788888653
No 304
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=86.67 E-value=0.62 Score=39.34 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=25.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.||+|+|+|.||..+.+.|.... .+|+..+
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G-~~V~~~d 38 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN-HSVFGYN 38 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC-CEEEEEe
Confidence 68999999999999999998774 7776664
No 305
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=86.60 E-value=0.61 Score=35.17 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=27.2
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
.+||.|.|. |.||+.+++.|.+++.+ +++++..
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r 39 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR 39 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 468999998 99999999999988643 7776654
No 306
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=86.57 E-value=0.97 Score=38.54 Aligned_cols=31 Identities=19% Similarity=0.521 Sum_probs=27.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|.|+|.||+.+++.|.+. +.+|+ +.|+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~-GakVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE-GAKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHC-CCEEE-EEcC
Confidence 5899999999999999999888 47887 7776
No 307
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.32 E-value=0.69 Score=40.71 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=27.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+.||.|.|+|.+|+.+++.|.++++++|+.++.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R 55 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACR 55 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEES
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEEC
Confidence 468999999999999999999886688766654
No 308
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=86.15 E-value=1.8 Score=36.53 Aligned_cols=97 Identities=18% Similarity=0.286 Sum_probs=57.0
Q ss_pred cceEEEEcc-CHHHHHHHHH--HHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCE--EEE
Q 029788 3 KVKIGINGF-GRIGRLVARV--ILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEK--PVT 77 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~--l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~--~i~ 77 (188)
..||-|.|+ |+.++.+++. +.+|++.++|+.-++...- ||. + +.++.+ .++
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g------------~~~----~--------v~~G~~~~Gvp 65 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGD------------HKQ----K--------FYWGHKEILIP 65 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCS------------EEE----E--------EEETTEEEEEE
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCC------------ccc----e--------EeccCccCCce
Confidence 378999999 9999888876 4577789999998873110 000 1 111222 244
Q ss_pred EEeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHh-CCCcEEEE-eC
Q 029788 78 VFGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLK-GGAKKVII-SA 125 (188)
Q Consensus 78 v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~-aGak~vvi-s~ 125 (188)
++. +.++++=...++|+++.+++.......+...+. +|.+-+|+ |.
T Consensus 66 vy~--sv~ea~~~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~ 113 (334)
T 3mwd_B 66 VFK--NMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAE 113 (334)
T ss_dssp EES--SHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCS
T ss_pred eeC--CHHHHhhcCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 442 222221000147999888876544444455565 78887766 54
No 309
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.11 E-value=0.76 Score=38.87 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=25.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++||+|+|+|.+|..+...|.+.. .+|...+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G-~~V~l~~ 59 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG-QKVRLWS 59 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT-CCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC-CeEEEEe
Confidence 479999999999999999888764 5655443
No 310
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=86.10 E-value=0.49 Score=42.01 Aligned_cols=97 Identities=15% Similarity=0.235 Sum_probs=55.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc---eEEEEeCCCCChhhhhhhheeccccc-cccccceEEeCCCceEECCEEEEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV---ELVAVNDPFITTDYMTYMFKYDSVHG-QWKHHELKVKDDKTLLFGEKPVTVF 79 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~---~vv~Ind~~~~~~~~a~ll~ydS~~g-~~~~~~v~~~~~~~l~i~g~~i~v~ 79 (188)
.||.|+|||.||+.+++.+.+++++ +++-+ |+...... +.+ - .| ++. ...+...+ +
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~va-D~~~~~~~---~~~--~-~g~~~~--~~~Vdadn-v---------- 73 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTII-AAEGTKVD---VAQ--Q-YGVSFK--LQQITPQN-Y---------- 73 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEE-ESSCCSCC---HHH--H-HTCEEE--ECCCCTTT-H----------
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEe-ccchhhhh---HHh--h-cCCcee--EEeccchh-H----------
Confidence 6899999999999999999988766 56544 43211111 000 0 00 000 00000000 0
Q ss_pred eecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 80 GVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 80 ~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+...+.+ -++ + |+|+.++-.+.+...++..+++|+ -.|+..
T Consensus 74 -~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlDTa 114 (480)
T 2ph5_A 74 -LEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYINAA 114 (480)
T ss_dssp -HHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEESS
T ss_pred -HHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEECC
Confidence 0002211 122 3 999998877878888889999999 567654
No 311
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.03 E-value=0.77 Score=40.26 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=25.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|+|+|+||+.+++.|... +.+|+. .|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~-Ga~Viv-~D~ 242 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF-GARVVV-TEV 242 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE-ECC
Confidence 6899999999999999999877 477655 454
No 312
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=86.01 E-value=0.96 Score=37.39 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=24.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
-+|.|.|+|.+|...++.+.... . +++++..
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~ 197 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASG-AGPILVSDP 197 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 36999999999999999887764 6 6777643
No 313
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=85.92 E-value=0.74 Score=40.73 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=27.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
++||+|+|+|.+|..+...+.+.+++ +|+.++-
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~ 51 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQR 51 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 47999999999999999988887457 8877743
No 314
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=85.90 E-value=0.6 Score=41.41 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=25.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|+|+|+|+||+.+++.+... +++|++.+
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~-G~~Viv~d 287 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL-GARVYITE 287 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-cCEEEEEe
Confidence 6899999999999999998876 47876664
No 315
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.84 E-value=0.75 Score=38.70 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=25.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|+|+|.||...++.+... +.+++++..
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 4799999999999999988776 467777654
No 316
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=85.78 E-value=0.68 Score=36.75 Aligned_cols=26 Identities=19% Similarity=0.459 Sum_probs=23.3
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~ 26 (188)
|+++||.|.|. |.||+.+++.|.+++
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g 30 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGA 30 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcC
Confidence 55689999999 999999999999875
No 317
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.67 E-value=0.8 Score=40.44 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~I 33 (188)
.+|+|+|+|+||+.+++.+... +.+|+..
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf-Ga~Viv~ 276 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA-GARVKVT 276 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCEEEEE
Confidence 5899999999999999999877 4776554
No 318
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=85.59 E-value=1.8 Score=40.34 Aligned_cols=146 Identities=18% Similarity=0.280 Sum_probs=77.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhhee-----c--cccccccccceEEeCCCceEECCEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKY-----D--SVHGQWKHHELKVKDDKTLLFGEKPV 76 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~y-----d--S~~g~~~~~~v~~~~~~~l~i~g~~i 76 (188)
.||||+|+|.+|+-++..+... +++|+-. |. +.+.+....++ + ...++.. . ... . . ..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~~V~l~-D~--~~~~l~~~~~~i~~~l~~~~~~~~~~-~-----~~~-~-~--~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GISVVAV-ES--DPKQLDAAKKIITFTLEKEASRAHQN-G-----QAS-A-K--PKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCEEEEE-CS--SHHHHHHHHHHHHHHHHHHHHHHHTT-T-----CCC-C-C--CCE
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CCchhcc-cc--hHhhhhhHHHHHHHHHHHHHHhcccc-c-----hhh-h-h--hhh
Confidence 5899999999999999888776 5877544 54 33332222211 0 0011101 0 000 0 0 122
Q ss_pred EEEeecCCCCCCCcCCCccEEEeecCCccCHh-----hHHHHHhCCCcEEEEeCCCC----------CCCeEEee---cC
Q 029788 77 TVFGVRNPEEIPWAETGAEYVVESTGVFTDKD-----KAAAHLKGGAKKVIISAPSK----------DAPMFVVG---VN 138 (188)
Q Consensus 77 ~v~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~-----~~~~~l~aGak~vvis~ps~----------d~p~~V~g---vN 138 (188)
.. ..+.+.+ .++|+|+||.-.-...+ ..+.+...++ ++-||.|. +-|-=+.| .|
T Consensus 383 ~~--~~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RF--SSSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EE--ESCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred cc--cCcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 22 2344444 27999999986554432 2345555555 77788762 23421222 23
Q ss_pred ccCcCCCCcEEEcCChhhHhHHHHHHHHHHhcCc
Q 029788 139 EHEYKPELNIVSNASCTTNCLAPLAKVIHDKFGI 172 (188)
Q Consensus 139 ~~~~~~~~~ivs~~sCtT~~la~~lk~l~~~~gI 172 (188)
+-.+-+--.||..+..+-..++-+.... +..|-
T Consensus 455 P~~~m~LVEvi~g~~Ts~e~~~~~~~~~-~~lgK 487 (742)
T 3zwc_A 455 PAHVMRLLEVIPSRYSSPTTIATVMSLS-KKIGK 487 (742)
T ss_dssp STTTCCEEEEEECSSCCHHHHHHHHHHH-HHTTC
T ss_pred CCCCCceEEEecCCCCCHHHHHHHHHHH-HHhCC
Confidence 3222211258888877777777776654 44553
No 319
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.55 E-value=1 Score=37.89 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=27.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|+|+|.|.+|+.+++++.+. +++++.++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeC
Confidence 5899999999999999999877 589888863
No 320
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.54 E-value=0.85 Score=36.49 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=28.3
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++||.|.|. |.||+.+++.|.+++ .+|+++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASG-EEVTVLDDL 40 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECCC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CEEEEEecC
Confidence 579999999 999999999999884 788887653
No 321
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.48 E-value=1 Score=36.08 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=27.2
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|||.|-|. |-||+.+++.|.++ +.+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~-G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR-GHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-CCEEEEEEC
Confidence 38999999 99999999999988 478888864
No 322
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=85.43 E-value=0.85 Score=37.63 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=26.2
Q ss_pred CC-cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 1 MG-KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 1 m~-~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
|. ++||+|+|+|.+|..++..+...+..++ .+-|.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V-~l~D~ 36 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADV-VLFDI 36 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEE-EEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceE-EEEeC
Confidence 53 3699999999999999998887642274 44454
No 323
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=85.32 E-value=0.97 Score=36.91 Aligned_cols=31 Identities=29% Similarity=0.370 Sum_probs=24.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEE
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAV 33 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~I 33 (188)
++||+|+|+|.+|..+...|...+.+ +++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~ 38 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLE 38 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 36999999999999999888776422 66555
No 324
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.30 E-value=3 Score=34.57 Aligned_cols=30 Identities=23% Similarity=0.202 Sum_probs=23.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCce-EEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVE-LVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~-vv~In 34 (188)
-+|.|+|+|.||...++.+.... .+ ++++.
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 211 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAG-ACPLVITD 211 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEEC
Confidence 46999999999999999888764 55 66654
No 325
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=85.21 E-value=0.74 Score=37.61 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=24.7
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||+|+|+|.+|..+.+.|.+.. .++..++.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g-~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNG-NEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHC-CEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEEc
Confidence 8999999999999999888764 67666643
No 326
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.15 E-value=0.66 Score=38.21 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=22.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAV 33 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~I 33 (188)
-+|.|.|+|.+|...++.+.....-.++++
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~ 191 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGAKSVTAI 191 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CEEEEECCCCcchHHHHHHHHcCCcEEEEE
Confidence 479999999999999988877742333444
No 327
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=84.71 E-value=1.9 Score=35.70 Aligned_cols=86 Identities=20% Similarity=0.144 Sum_probs=54.0
Q ss_pred ceEEEE-cc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEee
Q 029788 4 VKIGIN-GF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGV 81 (188)
Q Consensus 4 ~~vaIn-G~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~ 81 (188)
.+++|+ |+ |+.|+.+++.+.+. +++++.-.+|. . . +. + +.|. +++.
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~-G~~~v~~VnP~-------------~-~-----g~-~--------i~G~--~vy~- 61 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY-GTNLVGGTTPG-------------K-G-----GK-T--------HLGL--PVFN- 61 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-TCEEEEEECTT-------------C-T-----TC-E--------ETTE--EEES-
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC-CCcEEEEeCCC-------------c-C-----cc-e--------ECCe--eeec-
Confidence 568898 99 99999999988877 47766333441 0 0 00 0 1221 2221
Q ss_pred cCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 82 RNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 82 ~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
+.++++- +.++|+++-+++.....+.++..+++|.+.+|+
T Consensus 62 -sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 62 -TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2233321 125889998888877777778888889887444
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=84.65 E-value=5.2 Score=32.97 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=24.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
-+|.|.|+|.+|...++.+... +.+|+++.
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~ 199 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY-GAFVVCTA 199 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEc
Confidence 4799999999999999988776 46766664
No 329
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.63 E-value=1.3 Score=37.03 Aligned_cols=33 Identities=36% Similarity=0.426 Sum_probs=26.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++||+|+|+|.+|..++..+...+.++ +.+-|.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~-V~L~Di 46 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGD-VYMFDI 46 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCE-EEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 469999999999999988888775337 555565
No 330
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=84.53 E-value=3.4 Score=36.03 Aligned_cols=83 Identities=18% Similarity=0.201 Sum_probs=55.8
Q ss_pred cceEEEEccC----HHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEE
Q 029788 3 KVKIGINGFG----RIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTV 78 (188)
Q Consensus 3 ~~~vaInG~G----rIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v 78 (188)
+.+|+|+|++ ++|+.+++.+.+.+...|.+||-- ++.. .|. ++
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~------------~~~i-------------------~G~--~~ 54 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIK------------EEEV-------------------QGV--KA 54 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSS------------CSEE-------------------TTE--EC
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCC------------CCeE-------------------CCE--ec
Confidence 4689999995 889999999987644677777631 1111 121 12
Q ss_pred EeecCCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 79 FGVRNPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 79 ~~~~~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
+ .+.++++ ..+|+++-+++.....+.++...+.|+|.+++
T Consensus 55 y--~sl~~lp---~~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 55 Y--KSVKDIP---DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp B--SSTTSCS---SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred c--CCHHHcC---CCCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 2 2344554 25888888888777777777777888887554
No 331
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.50 E-value=1.2 Score=39.03 Aligned_cols=31 Identities=29% Similarity=0.520 Sum_probs=25.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+.||+|+|+|.+|..++..+... +++|+.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~D 67 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAVE 67 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEEE
Confidence 46899999999999999988877 47776653
No 332
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.47 E-value=0.55 Score=39.55 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=19.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcC
Q 029788 3 KVKIGINGFGRIGRLVARVILQR 25 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~ 25 (188)
++||+|+|+|.+|..+...|.+.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHc
Confidence 36999999999999999888654
No 333
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=84.42 E-value=0.97 Score=37.43 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=33.4
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhhe
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFK 48 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ 48 (188)
||.|-|+ |.||+.+++.|.+++.++++.+.- ..+.+.+..+++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~~d~~~l~~~~~ 45 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-QTKEEELESALL 45 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-TCCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-CCCHHHHHHHhc
Confidence 8999999 999999999999886558877754 136666666554
No 334
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.40 E-value=1.1 Score=37.57 Aligned_cols=96 Identities=15% Similarity=0.235 Sum_probs=52.3
Q ss_pred ceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
-+|.|+| .|.||...++.+......+++++.. +.+.+.++.+ .|. . -.++.+. .+ . .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~---~~~~~~~~~~----lGa----d--------~vi~~~~-~~-~-~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATAS---RPETQEWVKS----LGA----H--------HVIDHSK-PL-A-A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECS---SHHHHHHHHH----TTC----S--------EEECTTS-CH-H-H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeC---CHHHHHHHHH----cCC----C--------EEEeCCC-CH-H-H
Confidence 3689999 5999999998877533578777754 3444434432 111 0 1111000 00 0 0
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEE
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVII 123 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvi 123 (188)
...++ ...++|+||||+|.....+.+-..++.|-+-+++
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEE
Confidence 11112 2247999999999654445555666665543333
No 335
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=84.38 E-value=0.83 Score=40.15 Aligned_cols=30 Identities=17% Similarity=0.266 Sum_probs=25.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||||+|+|.+|+.+.+.|.+.. ++|...+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G-~~V~v~d 32 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG-FVVCAFN 32 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CeEEEEChHHHHHHHHHHHHHCC-CeEEEEe
Confidence 58999999999999999998774 7765554
No 336
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=84.27 E-value=2.3 Score=35.41 Aligned_cols=146 Identities=10% Similarity=0.175 Sum_probs=72.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|.||...++.+.... .+++++.. +.+.+.++.++ |. . ..+. .+...+. ..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga-~-~vi~-~~~~~~~-----------~~ 248 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATG-AEVIVTSS---SREKLDRAFAL----GA-D-HGIN-RLEEDWV-----------ER 248 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHHH----TC-S-EEEE-TTTSCHH-----------HH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEec---CchhHHHHHHc----CC-C-EEEc-CCcccHH-----------HH
Confidence 47999999999999999888774 68877754 23333333221 11 0 0010 0000000 00
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccC-cCCCCcEEEcCChhhHhHHHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHE-YKPELNIVSNASCTTNCLAPL 162 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~-~~~~~~ivs~~sCtT~~la~~ 162 (188)
..++. ...++|+||||+|. .+.+.+-..++.|-+-+++..++.. . ..+|... +..+..+...-..+...+..+
T Consensus 249 v~~~~-~g~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~--~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 322 (363)
T 3uog_A 249 VYALT-GDRGADHILEIAGG-AGLGQSLKAVAPDGRISVIGVLEGF--E--VSGPVGPLLLKSPVVQGISVGHRRALEDL 322 (363)
T ss_dssp HHHHH-TTCCEEEEEEETTS-SCHHHHHHHEEEEEEEEEECCCSSC--E--ECCBTTHHHHTCCEEEECCCCCHHHHHHH
T ss_pred HHHHh-CCCCceEEEECCCh-HHHHHHHHHhhcCCEEEEEecCCCc--c--cCcCHHHHHhCCcEEEEEecCCHHHHHHH
Confidence 00000 11379999999994 3445555566554433333333221 1 1222222 112334554444445667777
Q ss_pred HHHHHHhcCceEEEEEE
Q 029788 163 AKVIHDKFGIVEGLMTT 179 (188)
Q Consensus 163 lk~l~~~~gI~~~~vtT 179 (188)
++.+.+. .++. .++.
T Consensus 323 ~~l~~~g-~l~~-~i~~ 337 (363)
T 3uog_A 323 VGAVDRL-GLKP-VIDM 337 (363)
T ss_dssp HHHHHHH-TCCC-CEEE
T ss_pred HHHHHcC-CCcc-ceee
Confidence 7777653 4543 3443
No 337
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=84.19 E-value=1 Score=36.68 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=27.4
Q ss_pred CC-cceEEEEcc-CHHHHHHHHHHHcCC-CceEEEEeC
Q 029788 1 MG-KVKIGINGF-GRIGRLVARVILQRD-DVELVAVND 35 (188)
Q Consensus 1 m~-~~~vaInG~-GrIGr~~lr~l~~~~-~~~vv~Ind 35 (188)
|+ |++|.|-|. |.||+.+++.|.++. +.+|+++..
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r 38 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK 38 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 53 469999999 999999999998763 478887754
No 338
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=84.10 E-value=1.1 Score=39.05 Aligned_cols=40 Identities=28% Similarity=0.326 Sum_probs=29.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
++||+|+|+|.+|..+...+.+ +.+|+.++ . +.+.+..+-
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D-~--~~~~v~~l~ 75 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALD-I--VQAKVDMLN 75 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEEC-S--CHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEe-c--CHHHhhHHh
Confidence 4699999999999999887775 58887764 3 455444443
No 339
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=84.09 E-value=0.78 Score=36.36 Aligned_cols=31 Identities=13% Similarity=0.388 Sum_probs=27.2
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+||.|.|. |.||+.+++.|.++ +.+|+++..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE-EYDIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT-TEEEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCEEEEecc
Confidence 59999999 99999999999887 488888864
No 340
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=84.04 E-value=0.85 Score=40.08 Aligned_cols=30 Identities=23% Similarity=0.509 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||||+|+|.+|+.+.+.|.+.. ++|...+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G-~~V~v~d 31 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG-FKVAVFN 31 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CEEEEEe
Confidence 48999999999999999998774 6766554
No 341
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=83.99 E-value=1.3 Score=36.16 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=27.7
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|.|.|+ |.||+.+++.|.+++ .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeC
Confidence 478999999 999999999999874 78888764
No 342
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=83.95 E-value=1.4 Score=37.18 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=27.3
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+.+|+|+|.|.+|+.+++++.+. +++++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~l-G~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKM-GYKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 36899999999999999999888 58888885
No 343
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=83.84 E-value=1.1 Score=39.07 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=26.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|++.+|.|.|.|.+|+.+++.|.+. +.+++..+.
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~-G~~V~v~~R 34 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDS-GIKVTVACR 34 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTT-TCEEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-cCEEEEEEC
Confidence 6667899999999999999999876 477655543
No 344
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=83.79 E-value=1.3 Score=38.56 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=29.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
..+|+|-|||-+|+.+++.|.+. +.++|+|.|.
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~-GakVVavsD~ 250 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERL-GMRVVAVATS 250 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEEET
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEEcC
Confidence 36899999999999999999887 5999999997
No 345
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=83.71 E-value=0.97 Score=40.05 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=27.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
..||||+|+|.+|+.+.+.|.++ +++|+..|.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr 41 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNR 41 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeC
Confidence 47999999999999999999887 478766654
No 346
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=83.69 E-value=1 Score=36.75 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=28.6
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCC-CceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRD-DVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~-~~~vv~Ind~ 36 (188)
++||.|-|+ |.||+.+++.|.+++ .++++++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecc
Confidence 478999999 999999999998763 4888888653
No 347
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=83.65 E-value=1.4 Score=36.73 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=25.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
..||+|+|+|.+|..++..+..++ + +++- -|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g-~~~v~l-~D~ 40 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE-LADVVL-VDI 40 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CCEEEE-ECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC-CCeEEE-Eec
Confidence 368999999999999998888774 5 5544 454
No 348
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.57 E-value=1.3 Score=37.12 Aligned_cols=30 Identities=20% Similarity=0.416 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||...++.+.... . +|+++.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~ 225 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAG-ASRIIGID 225 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT-CSCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 46999999999999998887664 5 676764
No 349
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=83.36 E-value=1.2 Score=36.69 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=26.9
Q ss_pred CC-cceEEEEcc-CHHHHHHHHHHHcCCCc------eEEEEe
Q 029788 1 MG-KVKIGINGF-GRIGRLVARVILQRDDV------ELVAVN 34 (188)
Q Consensus 1 m~-~~~vaInG~-GrIGr~~lr~l~~~~~~------~vv~In 34 (188)
|+ ++||.|.|. |.||+.+++.|..++.+ +++.+.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 53 479999998 99999999998877533 676663
No 350
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.34 E-value=4.5 Score=33.34 Aligned_cols=90 Identities=19% Similarity=0.063 Sum_probs=51.9
Q ss_pred ceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 4 ~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
.||.++|.|.+|.. +++.|.++. .+|. +.|....+.....|-+ .| + + +....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G-~~V~-~~D~~~~~~~~~~L~~----------------~g--i-----~--v~~g~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG-FEVS-GCDAKMYPPMSTQLEA----------------LG--I-----D--VYEGF 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT-CEEE-EEESSCCTTHHHHHHH----------------TT--C-----E--EEESC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC-CEEE-EEcCCCCcHHHHHHHh----------------CC--C-----E--EECCC
Confidence 58999999999995 778888874 6654 4554322221111110 11 1 1 11123
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEe
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIIS 124 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis 124 (188)
+++++.+ .++|+|+-+.|.-.+........+.|.+ |++
T Consensus 58 ~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~--v~~ 95 (326)
T 3eag_A 58 DAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP--YIS 95 (326)
T ss_dssp CGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC--EEE
T ss_pred CHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc--EEe
Confidence 4554431 1589999998876665555666666763 454
No 351
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.33 E-value=1.2 Score=39.01 Aligned_cols=31 Identities=10% Similarity=0.262 Sum_probs=25.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|.|+|.||+.+++.+... +.+|+. .|.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~-Ga~Viv-~D~ 251 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM-GSIVYV-TEI 251 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEE-ECS
T ss_pred CEEEEEeeCHHHHHHHHHHHHC-CCEEEE-EeC
Confidence 5899999999999999999877 477654 454
No 352
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=83.23 E-value=1.2 Score=35.61 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=28.3
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+++|.|.|+ |.||+.+++.|.+++..+|+++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcC
Confidence 368999999 9999999999987744788887653
No 353
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=82.86 E-value=1.3 Score=36.31 Aligned_cols=32 Identities=25% Similarity=0.368 Sum_probs=27.6
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|.|-|+ |.||+.+++.|.+++ .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDN 59 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 468999999 999999999999874 78888764
No 354
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=82.68 E-value=1.6 Score=35.00 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=26.4
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~In 34 (188)
++|.|.|. |.||+.+++.|.+++ .+|+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNN-WHAVGCG 33 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHhCC-CeEEEEc
Confidence 68999999 999999999999874 7887775
No 355
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=82.57 E-value=1.2 Score=34.37 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=27.0
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
.++|.|-|. |.||+.+++.|.+++.+ +|+.+..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r 52 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR 52 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc
Confidence 358999998 99999999999987633 7777754
No 356
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=82.46 E-value=1.6 Score=35.14 Aligned_cols=31 Identities=26% Similarity=0.396 Sum_probs=26.8
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+||.|.|. |.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG-LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 48999999 999999999999874 78888764
No 357
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=82.36 E-value=1.2 Score=39.38 Aligned_cols=41 Identities=17% Similarity=0.268 Sum_probs=30.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
..||||+|+|.+|..++..+... +++|+.. |. +.+.+..+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G~~V~l~-D~--~~e~l~~~~ 45 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-GHQVLLY-DI--SAEALTRAI 45 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEE-CS--CHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCeEEEE-EC--CHHHHHHHH
Confidence 35899999999999999998877 4776655 44 455444443
No 358
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=82.22 E-value=1.1 Score=38.57 Aligned_cols=38 Identities=26% Similarity=0.511 Sum_probs=28.6
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhh
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~l 46 (188)
||+|+|+|.+|..+...|.+. +.+|+.+ |. +.+.+..+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~-d~--~~~~~~~l 39 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGV-DV--SSTKIDLI 39 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEE-CS--CHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEE-EC--CHHHHHHH
Confidence 899999999999999998877 4777666 43 44444333
No 359
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=82.21 E-value=1.3 Score=35.37 Aligned_cols=29 Identities=28% Similarity=0.276 Sum_probs=23.9
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
|++|+|+|.+|+.+++.|.+.+ .++...+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~v~~ 146 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVWVWN 146 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEEC
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEEEEE
Confidence 8999999999999999998875 5654443
No 360
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=82.14 E-value=1.3 Score=36.27 Aligned_cols=30 Identities=33% Similarity=0.530 Sum_probs=23.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCC-ceEEEE
Q 029788 4 VKIGINGFGRIGRLVARVILQRDD-VELVAV 33 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~-~~vv~I 33 (188)
+||+|+|+|.+|..++..|..++- -+++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~ 32 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFI 32 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 499999999999999998876641 355444
No 361
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=82.04 E-value=1.6 Score=35.91 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=25.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|+|+|.+|+.+++.+....+++-+.+.+.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 689999999999999998876423644566665
No 362
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=81.97 E-value=1.7 Score=36.94 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=25.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|+|+|+|+||+.+++.+...+ .+|++.+-
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~ 199 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLDI 199 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 68999999999999999988774 67766643
No 363
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=81.90 E-value=1.6 Score=36.25 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=24.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
++||+|+|+|.+|..++-.+..++-+ +++-+ |.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~-Di 40 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLI-DV 40 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEE-CC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 47999999999999988888776522 44444 54
No 364
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=81.89 E-value=1.8 Score=34.94 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=27.6
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+||.|.|. |.||+.+++.|.+++ .+|+++...
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 58999999 999999999999874 788887653
No 365
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=81.88 E-value=1.4 Score=36.58 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=25.9
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCc------eEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDV------ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~------~vv~Ind~ 36 (188)
++||+|.|+ |.||..++..|..++.+ +++.+ |.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~-Di 44 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLL-EI 44 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEE-CC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEE-cC
Confidence 479999998 99999999888876533 66665 44
No 366
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=81.79 E-value=2.4 Score=34.68 Aligned_cols=31 Identities=13% Similarity=0.250 Sum_probs=25.4
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|+ |.||+..++.+.... .+++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 181 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKG-AHTIAVAS 181 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999995 999999999888774 68877754
No 367
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=81.67 E-value=1.5 Score=37.43 Aligned_cols=31 Identities=19% Similarity=0.485 Sum_probs=27.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+.||+|+|-|..|+.+++++.+. +++++++.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~l-G~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRL-NIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEE
Confidence 57999999999999999999887 58888887
No 368
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=81.64 E-value=1.7 Score=36.71 Aligned_cols=23 Identities=30% Similarity=0.459 Sum_probs=20.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRD 26 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~ 26 (188)
.||.|+|+|.+|..++..|....
T Consensus 119 ~~VlvvG~GglGs~va~~La~aG 141 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSG 141 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhCC
Confidence 58999999999999999988664
No 369
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=81.61 E-value=1.2 Score=38.16 Aligned_cols=33 Identities=24% Similarity=0.173 Sum_probs=29.6
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
||+.||.|.|-|.+|+.++|.+.+. +++++++.
T Consensus 4 m~~~kiLI~g~g~~a~~i~~aa~~~-G~~~v~v~ 36 (446)
T 3ouz_A 4 MEIKSILIANRGEIALRALRTIKEM-GKKAICVY 36 (446)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred cccceEEEECCCHHHHHHHHHHHHc-CCEEEEEE
Confidence 7778999999999999999999988 59988885
No 370
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=81.58 E-value=1.7 Score=35.06 Aligned_cols=34 Identities=24% Similarity=0.467 Sum_probs=27.6
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+.++|-|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKG-YEVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 55578999999 999999999999874 78887754
No 371
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=81.47 E-value=1.1 Score=35.70 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=27.9
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcC-CCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~-~~~~vv~Ind 35 (188)
|+ +||.|-|. |.||+.+++.|.++ ++.+|+++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 36 (312)
T 2yy7_A 1 MN-PKILIIGACGQIGTELTQKLRKLYGTENVIASDI 36 (312)
T ss_dssp CC-CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES
T ss_pred CC-ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 54 68999999 99999999999876 3477777754
No 372
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=81.31 E-value=2.4 Score=34.88 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=25.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|+|.||+.+++.+.... .+++++..
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~ 196 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDI 196 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 47999999889999999888774 68777653
No 373
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=81.30 E-value=2.5 Score=35.08 Aligned_cols=31 Identities=23% Similarity=0.240 Sum_probs=24.9
Q ss_pred ceEEEEccCHHHHHH-HHHH-HcCCCce-EEEEeC
Q 029788 4 VKIGINGFGRIGRLV-ARVI-LQRDDVE-LVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~-lr~l-~~~~~~~-vv~Ind 35 (188)
-+|.|+|+|.||... ++.+ ... +.+ ++++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeC
Confidence 589999999999999 8887 655 466 777764
No 374
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=81.20 E-value=1 Score=35.06 Aligned_cols=29 Identities=17% Similarity=0.186 Sum_probs=24.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.++.|.|+|++|+.+++.|.+.. . ++.|.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g-~-v~vid 38 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSE-V-FVLAE 38 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSE-E-EEEES
T ss_pred CEEEEECCChHHHHHHHHHHhCC-e-EEEEE
Confidence 57999999999999999988774 5 76663
No 375
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=81.00 E-value=2 Score=36.37 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=21.3
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRD 26 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~ 26 (188)
|..+||+|.|+ |.||+.++-.|...+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~ 48 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGA 48 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhcc
Confidence 55689999998 999999887776554
No 376
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=81.00 E-value=1.8 Score=34.98 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=26.6
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++|.|-|. |.||+.+++.|.++ +.+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~-g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQ-GIDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhC-CCEEEEEeC
Confidence 48999999 99999999999987 478888753
No 377
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=80.84 E-value=2.4 Score=35.43 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=24.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||...++.+.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~ 223 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAAG-AARIIGVD 223 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 47999999999999999887774 5 676764
No 378
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=80.57 E-value=2 Score=35.34 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=68.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|+|.||...++.+.... .+++++.. +.+.+.++.++ |. . ..++ ..+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~~l----Ga----~--------~~i~--------~~~ 219 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMG-LRVAAVDI---DDAKLNLARRL----GA----E--------VAVN--------ARD 219 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CEEEEEES---CHHHHHHHHHT----TC----S--------EEEE--------TTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC---CHHHHHHHHHc----CC----C--------EEEe--------CCC
Confidence 46899999999999999888774 68888754 33444333321 11 0 1110 001
Q ss_pred CC---CCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCCCCCCCeEEeecCccCcCCCCcEEEcCChhhHhHH
Q 029788 84 PE---EIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 84 p~---~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~ps~d~p~~V~gvN~~~~~~~~~ivs~~sCtT~~la 160 (188)
.+ .+.-...++|+||+|+|...+.+.+-..++.|- ++++-+.... + +-...+ ..+..+..+......+...+.
T Consensus 220 ~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~-~-~~~~~~-~~~~~~~~i~g~~~~~~~~~~ 295 (340)
T 3s2e_A 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGG-TIALNGLPPG-D-FGTPIF-DVVLKGITIRGSIVGTRSDLQ 295 (340)
T ss_dssp SCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEE-EEEECSCCSS-E-EEEEHH-HHHHTTCEEEECCSCCHHHHH
T ss_pred cCHHHHHHHhCCCCCEEEEeCCCHHHHHHHHHHhccCC-EEEEeCCCCC-C-CCCCHH-HHHhCCeEEEEEecCCHHHHH
Confidence 00 000000168999999986555555556665443 3444332221 1 111111 111123445555555556677
Q ss_pred HHHHHHHH
Q 029788 161 PLAKVIHD 168 (188)
Q Consensus 161 ~~lk~l~~ 168 (188)
-+++.+.+
T Consensus 296 ~~~~l~~~ 303 (340)
T 3s2e_A 296 ESLDFAAH 303 (340)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77777654
No 379
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.54 E-value=2.9 Score=36.07 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=29.6
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
-+|.|.|+ |.||...++.+... +.+++++.. +.+.+.++.
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~---~~~~~~~~~ 270 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG-GANPICVVS---SPQKAEICR 270 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT-TCEEEEEES---SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc-CCeEEEEEC---CHHHHHHHH
Confidence 36999999 99999999988877 478777764 344444443
No 380
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=80.33 E-value=3.8 Score=33.36 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=25.5
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+|.|.|+ |.+|...++.+.... .+++++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~ 183 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGK 183 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 6999999 999999999887774 677777653
No 381
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=80.15 E-value=1.9 Score=36.53 Aligned_cols=93 Identities=18% Similarity=0.212 Sum_probs=53.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeec
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR 82 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~ 82 (188)
..||+|.|+|.+|+.+++.|.+. .+++ |.+. +.+....+.+ . + ..+. ++ +....
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~--~~V~-V~~R--~~~~a~~la~--~----~--~~~~--------~d-----~~~~~ 69 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVY-IGDV--NNENLEKVKE--F----A--TPLK--------VD-----ASNFD 69 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEE-EEES--CHHHHHHHTT--T----S--EEEE--------CC-----TTCHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC--CeEE-EEEC--CHHHHHHHHh--h----C--CeEE--------Ee-----cCCHH
Confidence 36899999999999999998876 5654 4443 3443322221 0 0 0000 00 00000
Q ss_pred CCCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeCC
Q 029788 83 NPEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISAP 126 (188)
Q Consensus 83 ~p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~p 126 (188)
+++++ -.++|+|+.|++.....+-+...+++|+ .+++.+
T Consensus 70 ~l~~l---l~~~DvVIn~~P~~~~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 70 KLVEV---MKEFELVIGALPGFLGFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp HHHHH---HTTCSCEEECCCHHHHHHHHHHHHHTTC--CEEECC
T ss_pred HHHHH---HhCCCEEEECCChhhhHHHHHHHHHhCC--eEEEcc
Confidence 11111 0268999999987766666777888887 455543
No 382
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=80.13 E-value=2.3 Score=32.88 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=28.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+.|+.|.|+|--||.+++.|.+. ++++++.-|.
T Consensus 12 ~k~v~IiGAGg~g~~v~~~l~~~-~~~~vgfiDd 44 (220)
T 4ea9_A 12 IGGVVIIGGGGHAKVVIESLRAC-GETVAAIVDA 44 (220)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECS
T ss_pred CCCEEEEcCCHHHHHHHHHHHhC-CCEEEEEEeC
Confidence 46899999999999999999874 5888888764
No 383
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.09 E-value=1.8 Score=35.90 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=25.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
-+|.|+|+|.+|...++.+.... . +++++..
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~ 204 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDL 204 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CSEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCEEEEECC
Confidence 47999999999999999887764 6 7777753
No 384
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=79.99 E-value=2.4 Score=34.85 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=28.1
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcC-CCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQR-DDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~-~~~~vv~Ind~ 36 (188)
+++|-|-|. |.||+.+++.|.++ .+.+|+++...
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence 468999999 99999999999982 25888888653
No 385
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=79.88 E-value=1.8 Score=38.45 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.+|+|+|+|.||+.+++.+.... .+|+++.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G-a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG-ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEe
Confidence 58999999999999999988774 6766553
No 386
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=79.75 E-value=2 Score=35.10 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=25.0
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|. |.||+..++.+.... .+++++..
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~ 173 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALG-AKLIGTVS 173 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999995 999999999887764 68877754
No 387
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=79.61 E-value=2.3 Score=34.54 Aligned_cols=32 Identities=31% Similarity=0.617 Sum_probs=27.4
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|.|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 21 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r 53 (333)
T 2q1w_A 21 MKKVFITGICGQIGSHIAELLLERG-DKVVGIDN 53 (333)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEEC
Confidence 468999999 999999999999874 78888754
No 388
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=79.57 E-value=1.8 Score=36.20 Aligned_cols=33 Identities=27% Similarity=0.379 Sum_probs=25.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
.+||+|+|+|.||..++..+..++.+ +++.+ |.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~-D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVI-DV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEE-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEE-ec
Confidence 47999999999999999988877533 55444 54
No 389
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=79.52 E-value=1.2 Score=36.79 Aligned_cols=24 Identities=21% Similarity=0.475 Sum_probs=20.6
Q ss_pred cceEEEEccCHHHHHHHHHHHcCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRD 26 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~ 26 (188)
..||.|+|+|.+|..++..|....
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aG 59 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCG 59 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCeEEEECcCHHHHHHHHHHHHcC
Confidence 368999999999999999888653
No 390
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=79.51 E-value=2.3 Score=34.53 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=27.7
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+ ++|-|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 1 M~-~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (348)
T 1ek6_A 1 MA-EKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDN 34 (348)
T ss_dssp CC-SEEEEETTTSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEec
Confidence 54 69999999 999999999999874 77777754
No 391
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=79.44 E-value=2.2 Score=37.53 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=26.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
..||||+|+|.+|..++..+... +++|+..+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D 84 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-GIETFLVV 84 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEE
Confidence 36899999999999999998877 58876664
No 392
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=79.43 E-value=1.6 Score=33.28 Aligned_cols=34 Identities=21% Similarity=0.077 Sum_probs=23.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|||.|+.|.|+|--||.+++.+.... +++++.-|
T Consensus 1 ~~m~~~~I~Gagg~gk~v~~~~~~~~-~~v~~f~D 34 (194)
T 3bfp_A 1 ARTEKIYIYGASGHGLVCEDVAKNMG-YKECIFLD 34 (194)
T ss_dssp CCCSEEEEEC--CHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CCCccEEEEeCCHHHHHHHHHHHhCC-CeEEEEEe
Confidence 34468999999989999999886543 66665554
No 393
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=79.36 E-value=2.4 Score=34.98 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=27.4
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|-|-|. |.||+.+++.|.+++ .+|+++...
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 57 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKG-YEVHGIVRR 57 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-CEEEEEECC
Confidence 68999999 999999999999874 788887653
No 394
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=79.32 E-value=2.5 Score=34.15 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=27.5
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||.|.|. |.||+.+++.|.++++.+|+++...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 7999999 9999999999998755788888653
No 395
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=79.29 E-value=2.3 Score=35.42 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=25.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+||+|+|+|.+|..++..|...+.++ +.+-|.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~-V~L~D~ 41 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD-VVLYDV 41 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe-EEEEEC
Confidence 69999999999999998888764337 455565
No 396
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=79.28 E-value=8.8 Score=33.31 Aligned_cols=94 Identities=15% Similarity=0.097 Sum_probs=53.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
.+|.|+|.|++|...++.|.+.. -+++.|.. ....+ +..+.+ . +.+.+.. .+-+
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~-~~~~~-~~~l~~--~-------~~i~~~~--------------~~~~ 66 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNAL-TFIPQ-FTVWAN--E-------GMLTLVE--------------GPFD 66 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEES-SCCHH-HHHHHT--T-------TSCEEEE--------------SSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEcC-CCCHH-HHHHHh--c-------CCEEEEE--------------CCCC
Confidence 68999999999999999999874 66655543 22222 212211 0 1112111 1112
Q ss_pred CCCCCCcCCCccEEEeecCCc-cCHhhHHHHHhCCCcEEEEeCCC
Q 029788 84 PEEIPWAETGAEYVVESTGVF-TDKDKAAAHLKGGAKKVIISAPS 127 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~-~~~~~~~~~l~aGak~vvis~ps 127 (188)
++.++ ++|+||=|||.. ....-+....+.|...-+++.|.
T Consensus 67 ~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 67 ETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp GGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 33332 689999999976 34444445555677433456553
No 397
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=79.26 E-value=1.8 Score=36.07 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=23.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|+|.|.||...++.+.... . +++++.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~ 222 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCG-ASIIIAVD 222 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CSEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 37999999999999988877663 5 566664
No 398
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=79.09 E-value=1.6 Score=37.33 Aligned_cols=31 Identities=26% Similarity=0.520 Sum_probs=25.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
.+|+|+|+|.+|+.+++.+...+ . +|+.+|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G-~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG-VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC-CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 58999999999999999988764 6 6666654
No 399
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=79.06 E-value=1.8 Score=34.89 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=24.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.||+|+|+|.+|+.+++.|.+.+ .++...+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~ 159 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVFLWN 159 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEEEEE
Confidence 58999999999999999998775 5665554
No 400
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=78.96 E-value=1.9 Score=36.87 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=24.0
Q ss_pred eEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 5 KIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
||+|+|+|.+|..+...|.+ +.+|+.++
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G~~V~~~d 29 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--QNEVTIVD 29 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhC--CCEEEEEE
Confidence 89999999999999988876 47877774
No 401
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=78.83 E-value=2 Score=35.79 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=23.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||...++.+.... . +|+++.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~ 223 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAG-ASRIIGVG 223 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEC
Confidence 47999999999999998877663 5 666664
No 402
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=78.81 E-value=2.3 Score=35.02 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+||.|+|+|..|-.++..|..+ +++++-+-
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-GIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCEEEEe
Confidence 6999999999999988888877 57776663
No 403
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=78.58 E-value=0.82 Score=35.99 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=27.2
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|| .+|.|.|. |.||+.+++.|.+++ .+|+++..
T Consensus 1 M~-~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (267)
T 3ay3_A 1 ML-NRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDI 34 (267)
T ss_dssp CE-EEEEEESTTSHHHHHHGGGGGGTE-EEEEECCS
T ss_pred CC-ceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 53 68999999 999999999998874 77776654
No 404
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=78.55 E-value=3 Score=33.89 Aligned_cols=30 Identities=17% Similarity=0.376 Sum_probs=25.5
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+|.|.|+ |.+|...++.+.... .+++++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG-YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC-CEEEEEeC
Confidence 5999999 999999999888774 68888764
No 405
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=78.54 E-value=2.8 Score=34.83 Aligned_cols=32 Identities=28% Similarity=0.356 Sum_probs=27.6
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|.|.|. |.||+.+++.|.+++ .+|+++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG-HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC-CeEEEEEC
Confidence 468999999 999999999999874 78888765
No 406
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=78.35 E-value=2.5 Score=35.09 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=27.0
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++|.|-|+ |.||+.+++.|.+++..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEEC
Confidence 68999999 999999999999873278877754
No 407
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=78.32 E-value=1.1 Score=37.35 Aligned_cols=31 Identities=16% Similarity=0.405 Sum_probs=25.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|+|.||...++.+.... .+++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~ 212 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMG-HHVTVISS 212 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEeC
Confidence 37999999999999998887664 67777754
No 408
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=77.72 E-value=6.8 Score=32.64 Aligned_cols=30 Identities=10% Similarity=0.022 Sum_probs=25.1
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~In 34 (188)
-+|.|+|+ |.+|...++.+.... .+++++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG-YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence 36999999 999999999888774 6887775
No 409
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=77.69 E-value=2.4 Score=35.76 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=25.3
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
|.+.||+|+|+ |.||..++..+..++.. +++-+ |.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLi-Di 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLY-DP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEE-CS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEE-eC
Confidence 44679999998 99999998877766421 45444 54
No 410
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=77.46 E-value=2.4 Score=36.34 Aligned_cols=31 Identities=19% Similarity=0.128 Sum_probs=25.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|+|+|+||+.+++.+...+ .+|++. |.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~-D~ 203 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLG-AIVRAF-DT 203 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE-cC
Confidence 58999999999999999988775 665554 44
No 411
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=77.39 E-value=3 Score=34.44 Aligned_cols=40 Identities=8% Similarity=0.219 Sum_probs=28.6
Q ss_pred ceEEEEc-cCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 4 VKIGING-FGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 4 ~~vaInG-~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
-+|.|.| .|.||...++.+.... .+++++.. +.+.+.++.
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~---~~~~~~~~~ 192 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYG-LRVITTAS---RNETIEWTK 192 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT-CEEEEECC---SHHHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHHH
Confidence 4699995 5999999999888774 68877743 344444443
No 412
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=77.34 E-value=2.5 Score=34.57 Aligned_cols=33 Identities=9% Similarity=0.086 Sum_probs=27.9
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.++|.|-|. |.||+.+++.|.+++ .+|+++...
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLT 42 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCC
Confidence 368999999 999999999999874 788887653
No 413
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.33 E-value=2.9 Score=35.20 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=25.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|+|.|+|.||+.+++.+.... .+|+.++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~ 197 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILDV 197 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 68999999999999999998775 67766643
No 414
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=77.30 E-value=2 Score=35.44 Aligned_cols=31 Identities=42% Similarity=0.722 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc--eEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV--ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~--~vv~Ind~ 36 (188)
+||+|+|+|.+|..++..|...+ . +++.+ |.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g-~~~~V~l~-D~ 33 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG-FAREMVLI-DV 33 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCCeEEEE-eC
Confidence 38999999999999998887664 4 55554 44
No 415
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=77.28 E-value=2.5 Score=35.42 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=25.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
.+||+|+|+|.||..++..+...+-+ ++ .+-|.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el-~l~D~ 42 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEI-GIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEE-EEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeE-EEEeC
Confidence 47999999999999999888877544 44 44454
No 416
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=77.24 E-value=2.7 Score=34.93 Aligned_cols=32 Identities=28% Similarity=0.282 Sum_probs=27.2
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.++|.|.|+ |.||+.+++.|.++. .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEC
Confidence 468999999 999999999998874 77877764
No 417
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=77.18 E-value=2.6 Score=34.51 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=27.0
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++|.|-|+ |.||+.+++.|.+++..+|+++...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 68999999 9999999999998743677777653
No 418
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=77.17 E-value=2 Score=36.14 Aligned_cols=142 Identities=12% Similarity=0.151 Sum_probs=68.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhheeccccccccccceEEeCCCceEECCEEEEEEeecC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRN 83 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll~ydS~~g~~~~~~v~~~~~~~l~i~g~~i~v~~~~~ 83 (188)
-+|.|.|.|.+|...++.+....-.+++++.. +.+.+.++.++ |. . ..+.. ... +... + .+ .
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~l----Ga-~-~vi~~-~~~----~~~~--~-~~-~ 258 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEI----GA-D-LTLNR-RET----SVEE--R-RK-A 258 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHT----TC-S-EEEET-TTS----CHHH--H-HH-H
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHc----CC-c-EEEec-ccc----Ccch--H-HH-H
Confidence 36999999999999999888763247777754 23443333321 11 0 00110 000 0000 0 00 0
Q ss_pred CCCCCCcCCCccEEEeecCCccCHhhHHHHHhCCCcEEEEeC-CCCCCCeEEeecCccC--cCCCCcEEEcCChhhHhHH
Q 029788 84 PEEIPWAETGAEYVVESTGVFTDKDKAAAHLKGGAKKVIISA-PSKDAPMFVVGVNEHE--YKPELNIVSNASCTTNCLA 160 (188)
Q Consensus 84 p~~~~w~~~~vdiV~e~tg~~~~~~~~~~~l~aGak~vvis~-ps~d~p~~V~gvN~~~--~~~~~~ivs~~sCtT~~la 160 (188)
..++. ...++|+||||+|...+.+.+-..++.|- +++.-+ ++...+. .++... +..+..+...-..+...+.
T Consensus 259 v~~~~-~g~g~Dvvid~~g~~~~~~~~~~~l~~~G-~iv~~G~~~~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~ 333 (380)
T 1vj0_A 259 IMDIT-HGRGADFILEATGDSRALLEGSELLRRGG-FYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFV 333 (380)
T ss_dssp HHHHT-TTSCEEEEEECSSCTTHHHHHHHHEEEEE-EEEECCCCSCCCCE---EECHHHHTTTTTCEEEECCCCCHHHHH
T ss_pred HHHHh-CCCCCcEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCCCCCe---eEchHHHHHhCCeEEEEeecCCHHHHH
Confidence 00010 11379999999996544455555565443 344333 3212121 233222 2223445544333455666
Q ss_pred HHHHHHHH
Q 029788 161 PLAKVIHD 168 (188)
Q Consensus 161 ~~lk~l~~ 168 (188)
-+++.+.+
T Consensus 334 ~~~~l~~~ 341 (380)
T 1vj0_A 334 KTVSITSR 341 (380)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 67777655
No 419
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=77.12 E-value=3 Score=34.42 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=27.0
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|-|.|. |.||+.+++.|.+++ .+|+++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r 60 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKG-YEVHGLIR 60 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCC-CEEEEEec
Confidence 58999999 999999999999874 78888764
No 420
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.10 E-value=2.5 Score=37.13 Aligned_cols=41 Identities=10% Similarity=0.241 Sum_probs=30.5
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhhh
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMF 47 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~ll 47 (188)
.+||+|+|+|.+|..+...|.+. +.+|+.++ . +.+.+..+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d-~--~~~~v~~l~ 48 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLD-V--DQAKIDILN 48 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC-S--CHHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEE-C--CHHHHHHHH
Confidence 37999999999999999988877 47877774 3 445444443
No 421
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=76.90 E-value=3.3 Score=34.33 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=26.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+++|+|+|.+|+..++++.....++.+.|.+.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC
Confidence 589999999999999999876334666777775
No 422
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=76.69 E-value=3.4 Score=34.63 Aligned_cols=33 Identities=39% Similarity=0.484 Sum_probs=25.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
..||+|+|+|.+|..++..+..++.. ++ .+-|.
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el-~L~Di 52 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADEL-ALVDV 52 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEE-EEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceE-EEEeC
Confidence 47999999999999988888777533 44 44454
No 423
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=76.67 E-value=2.5 Score=35.30 Aligned_cols=36 Identities=19% Similarity=0.194 Sum_probs=27.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhh
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYM 43 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~ 43 (188)
-||||+|+|.+|+-++..+... +++|+ +-|+ +++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~-G~~V~-l~D~--~~~~l 42 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVK-LYDI--EPRQI 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEE-EECS--CHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhC-CCeEE-EEEC--CHHHH
Confidence 5899999999999999888877 47764 4565 44443
No 424
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=76.03 E-value=2.8 Score=35.49 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+|+|+|+|++|+.+++.+...+ .+|++. |.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~-d~ 203 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLG-AVVMAT-DV 203 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 58999999999999999988774 675444 44
No 425
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=75.96 E-value=3.2 Score=35.58 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=26.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
.||+|+|.|.+||.+++++.+. +++++.+.
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d 65 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSM-GYRVAVLD 65 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEC
Confidence 5899999999999999998887 58887774
No 426
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=75.48 E-value=2.4 Score=33.48 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=27.1
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|++.+|-|-|+ |.||+.+++.|.++. .+|+.+..
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~r 35 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMA-EILRLADL 35 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEec
Confidence 66568999998 999999999998874 66665543
No 427
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=75.40 E-value=3.1 Score=35.72 Aligned_cols=31 Identities=13% Similarity=0.062 Sum_probs=25.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.||+|+|+|++|+.+++.+.... .+|+.. |.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~-D~ 215 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLG-AKTTGY-DV 215 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHT-CEEEEE-CS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEE-eC
Confidence 68999999999999999988764 676544 54
No 428
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=75.15 E-value=2.5 Score=33.80 Aligned_cols=30 Identities=27% Similarity=0.421 Sum_probs=24.7
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++|-|-|. |.||+.+++.|.+++ .++.+..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEEc
Confidence 48999999 999999999999885 5566654
No 429
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=75.14 E-value=3.5 Score=33.79 Aligned_cols=29 Identities=31% Similarity=0.447 Sum_probs=23.3
Q ss_pred eEEEEccCHHHHHHHHHHHcCC-CceEEEE
Q 029788 5 KIGINGFGRIGRLVARVILQRD-DVELVAV 33 (188)
Q Consensus 5 ~vaInG~GrIGr~~lr~l~~~~-~~~vv~I 33 (188)
||+|+|+|.+|..++..+...+ ..+++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~ 31 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLL 31 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEE
Confidence 8999999999999988887653 4566555
No 430
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=75.04 E-value=2.7 Score=34.04 Aligned_cols=34 Identities=18% Similarity=0.375 Sum_probs=27.1
Q ss_pred CcceEEEEcc-CHHHHHHHHHHHcCCC------ceEEEEeC
Q 029788 2 GKVKIGINGF-GRIGRLVARVILQRDD------VELVAVND 35 (188)
Q Consensus 2 ~~~~vaInG~-GrIGr~~lr~l~~~~~------~~vv~Ind 35 (188)
+.++|-|-|. |.||+.+++.|.+++. .+|+++..
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r 53 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV 53 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc
Confidence 3468999998 9999999999987742 57766654
No 431
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=75.02 E-value=3.7 Score=33.23 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=27.4
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.++|-|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQG-HEILVIDN 52 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEEC
Confidence 368999999 999999999999874 78887765
No 432
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=74.89 E-value=3.1 Score=34.63 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=24.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++||+|+|+|.+|..++..+...+-+.-+.+-|.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 4799999999999998887776653332344465
No 433
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=74.71 E-value=5.5 Score=33.16 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=24.7
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEe
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~In 34 (188)
-+|.|.|+ |.||+..++.+.... .+++++.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~ 215 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWD-AHVTAVC 215 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe
Confidence 37999995 999999999888774 6877775
No 434
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=74.65 E-value=3.7 Score=35.96 Aligned_cols=33 Identities=18% Similarity=0.369 Sum_probs=28.3
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++||.|-|. |.||+.+++.|.+++ .+|+++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 469999999 999999999999884 788888653
No 435
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=74.60 E-value=4 Score=32.88 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=27.1
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|-|-|. |.||+.+++.|.+++ .+|+.+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG-YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEec
Confidence 468999999 999999999999884 77777754
No 436
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=74.02 E-value=5.8 Score=32.91 Aligned_cols=30 Identities=17% Similarity=0.247 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEe
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVN 34 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~In 34 (188)
-+|.|.|+|.||...++.+.... . +++++.
T Consensus 192 ~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~ 222 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVD 222 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CCeEEEEc
Confidence 47999999999999998887664 5 666664
No 437
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=73.94 E-value=3.2 Score=33.31 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=28.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|++.+|.|+|.|..|-..+..|.++ +++++-+..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~ 34 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDA 34 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHS-SCCEEEECC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 6668999999999999999988877 477777753
No 438
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=73.89 E-value=3.3 Score=34.33 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=24.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+||+|+|+|.+|..++..+..++.+.-+.+-|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3799999999999998887776653332344465
No 439
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=73.53 E-value=4.1 Score=33.32 Aligned_cols=32 Identities=38% Similarity=0.585 Sum_probs=24.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
+||+|+|+|.+|..++..+...+.+ +++-+ |.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~-D~ 33 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLV-DR 33 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE-CS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEE-eC
Confidence 3899999999999999888776422 55444 54
No 440
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=73.24 E-value=4.1 Score=32.40 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=26.1
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||-|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 32 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELG-YEVVVVDN 32 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 7999999 999999999999884 78877754
No 441
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=73.09 E-value=3.7 Score=35.53 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=25.4
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.||+|+|+|++|+.+++.+.... .+|+ +.|.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lG-a~V~-v~D~ 221 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLG-AVVS-ATDV 221 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEE-EEcC
Confidence 68999999999999999988774 6654 4565
No 442
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=73.03 E-value=4.4 Score=32.56 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=27.8
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
++||-|-|. |.||+.+++.|.+++ .+|+++...
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 47 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVAR 47 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCC
Confidence 379999999 999999999999874 788888653
No 443
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=72.78 E-value=3.6 Score=33.50 Aligned_cols=31 Identities=35% Similarity=0.482 Sum_probs=26.4
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||-|-|. |.||+.+++.|.++++.+|+++..
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEec
Confidence 7999999 999999999998864578887754
No 444
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=72.56 E-value=3.4 Score=33.93 Aligned_cols=32 Identities=38% Similarity=0.510 Sum_probs=24.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
+||+|+|+|.+|..++..|..++.+ +++ +-|.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~-L~D~ 33 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIA-LVDI 33 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEE-EECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEE-EEEC
Confidence 3899999999999998888776533 544 4454
No 445
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=72.48 E-value=5.2 Score=33.60 Aligned_cols=34 Identities=24% Similarity=0.371 Sum_probs=26.8
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+.++|+|+|.|..|...+..|.++ +.+++-+..
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~ 34 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQ 34 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTT-TCEEEEEES
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEe
Confidence 6668999999999999998888876 467666653
No 446
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=72.33 E-value=15 Score=31.57 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=25.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.||.|+|.|..|..+++.|.++. .+|.. .|.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G-~~V~~-~D~ 40 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG-AIVTV-NDG 40 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT-CEEEE-EES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEE-EeC
Confidence 68999999999999999998884 66654 453
No 447
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=72.33 E-value=7.3 Score=31.94 Aligned_cols=31 Identities=3% Similarity=-0.008 Sum_probs=25.6
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|.|.|+ |.||+.+++.+.... .+++++..
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAG 199 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-CEEEEEeC
Confidence 47999999 999999999888774 67777654
No 448
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=72.19 E-value=4.2 Score=36.68 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=28.7
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+++|-|-|+ |.||+.+++.|.++++.+|+++...
T Consensus 315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~ 349 (660)
T 1z7e_A 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG 349 (660)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESC
T ss_pred CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcC
Confidence 468999999 9999999999998755788888653
No 449
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=71.88 E-value=5.1 Score=33.35 Aligned_cols=32 Identities=19% Similarity=0.384 Sum_probs=26.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
..+|.|+|.|..|-.++..|..+ +++++-+..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~ 57 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYER 57 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeC
Confidence 46899999999999998888876 578777753
No 450
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=71.72 E-value=4.8 Score=32.46 Aligned_cols=31 Identities=16% Similarity=0.260 Sum_probs=26.1
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|-|-|. |.||+.+++.|.++. .+|+++..
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKG-YAVNTTVR 41 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCchHHHHHHHHHHHHCC-CEEEEEEc
Confidence 68999998 999999999999874 77776543
No 451
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=71.64 E-value=5.1 Score=33.28 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=26.7
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.||+|+|.|..||.+++++.+.+ ++++.+..
T Consensus 2 ~~Ililg~g~~g~~~~~a~~~~G-~~v~~~~~ 32 (380)
T 3ax6_A 2 KKIGIIGGGQLGKMMTLEAKKMG-FYVIVLDP 32 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 48999999999999999988874 78887764
No 452
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.06 E-value=4.1 Score=32.99 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=26.4
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|.|-|+ |.||+.+++.|.+++ .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeC
Confidence 368999999 999999999999884 78877754
No 453
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=71.05 E-value=5.7 Score=30.38 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=26.2
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|-|-|. |-||+.+++.|.++. .+|+.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAG-HTVIGIDR 33 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeC
Confidence 47999999 999999999999874 77777754
No 454
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=71.00 E-value=5.1 Score=32.69 Aligned_cols=31 Identities=23% Similarity=0.385 Sum_probs=26.5
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++|-|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-CEEEEEEC
Confidence 48999999 999999999999874 78877754
No 455
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=70.95 E-value=4.7 Score=32.74 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=27.4
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDV-ELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind 35 (188)
|++.+|.|+|.|..|-..++.|.+.. . +++-|..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~lie~ 36 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFG-ITDVIILEK 36 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTT-CCCEEEECS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcC-CCcEEEEec
Confidence 65678999999999999999888763 5 6766653
No 456
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=70.78 E-value=5.6 Score=31.01 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=27.0
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|| .+|.|+|.|..|-..+..|.++. ++++-+..
T Consensus 1 m~-~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~ 33 (297)
T 3fbs_A 1 MK-FDVIIIGGSYAGLSAALQLGRAR-KNILLVDA 33 (297)
T ss_dssp CC-EEEEEECCSHHHHHHHHHHHHTT-CCEEEEEC
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhCC-CCEEEEeC
Confidence 54 79999999999999998888774 77777753
No 457
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=70.67 E-value=4.7 Score=33.46 Aligned_cols=22 Identities=27% Similarity=0.536 Sum_probs=19.0
Q ss_pred ceEEEEc-cCHHHHHHHHHHHcC
Q 029788 4 VKIGING-FGRIGRLVARVILQR 25 (188)
Q Consensus 4 ~~vaInG-~GrIGr~~lr~l~~~ 25 (188)
+||+|+| .|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 3899999 599999999888765
No 458
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=70.11 E-value=5.7 Score=31.67 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=27.0
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+++|-|-|. |.||+.+++.|.+++ .+|+++..
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r 44 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQN-VEVFGTSR 44 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred cceEEEECCCChHHHHHHHHHHHCC-CEEEEEec
Confidence 368999999 999999999999874 78887764
No 459
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=69.96 E-value=6 Score=32.65 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=27.1
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.||+|+|.|.-|+.+++++.+. +++++.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~ 32 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKA-GMKVVLVDK 32 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 5999999999999999988877 599999853
No 460
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=69.93 E-value=4.6 Score=32.37 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=25.7
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
+.+|.|+|.|.+|-.++..|.++ +++++-+-
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE 32 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFD 32 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEE
Confidence 36899999999999999888877 47776664
No 461
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=69.91 E-value=5.8 Score=33.03 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=25.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
..+|.|+|.|..|-.++..|..+ +++++-+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E 35 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDA-GVDVDVYE 35 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCCEEEEe
Confidence 47899999999999998888876 57777664
No 462
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=69.78 E-value=4.4 Score=35.85 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=26.3
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.++.|.|+|++|+.+++.|.+. +.+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEEC
Confidence 4789999999999999999877 477777754
No 463
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=69.61 E-value=6.5 Score=29.95 Aligned_cols=35 Identities=14% Similarity=0.260 Sum_probs=28.3
Q ss_pred CCcceEEEEcc-CHHHHHHHHHHHcCCC-ceEEEEeC
Q 029788 1 MGKVKIGINGF-GRIGRLVARVILQRDD-VELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~-GrIGr~~lr~l~~~~~-~~vv~Ind 35 (188)
|+..++-|-|. |-||+.+++.|.++.. .+|+.+..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r 37 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec
Confidence 65568999999 9999999999998742 67777754
No 464
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=69.17 E-value=3.2 Score=32.58 Aligned_cols=31 Identities=26% Similarity=0.589 Sum_probs=26.5
Q ss_pred eEEEEcc-CHHHHHHHHHHHcC-CCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~-~~~~vv~Ind 35 (188)
+|.|.|+ |.||+.+++.|.++ ++.+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc
Confidence 7899999 99999999999886 3578888765
No 465
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=69.15 E-value=4.2 Score=31.82 Aligned_cols=31 Identities=26% Similarity=0.515 Sum_probs=26.1
Q ss_pred eEEEEcc-CHHHHHHHHHHHcC-CCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~-~~~~vv~Ind 35 (188)
||.|.|+ |.||+.+++.|.++ ++.+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc
Confidence 5889999 99999999999876 3578888765
No 466
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=68.91 E-value=8.5 Score=31.24 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=27.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.++.|+|+|.+||.+++.|.+.. .++.-.|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 48999999999999999999876 777666654
No 467
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=68.78 E-value=5.4 Score=31.41 Aligned_cols=32 Identities=28% Similarity=0.557 Sum_probs=27.4
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
..||-|.|. |.||+.+++.|.++ +.+|+++..
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK-NVEVIPTDV 44 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS-SEEEEEECT
T ss_pred cceEEEECCCChHHHHHHHHHHhC-CCeEEeccC
Confidence 368999999 99999999999987 488888753
No 468
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=68.69 E-value=6 Score=31.24 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=26.4
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
||.|.|. |.||+.+++.|.+++..+|+++...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5889999 9999999999998743677777653
No 469
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=68.66 E-value=6.2 Score=32.50 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=24.0
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
+||+|+|+|.+|..++..+..++-+.-+.+-|.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 33 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDL 33 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 489999999999998887776653333344465
No 470
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=68.42 E-value=4.6 Score=35.34 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=30.1
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhh
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~l 46 (188)
|.+|+|+|+|.||-.+.-.+.+. +++|+++ |. +.+.+.-|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~-G~~V~g~-Di--d~~kV~~l 60 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL-GHRVVGY-DV--NPSIVERL 60 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCEEEEE-CS--CHHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCcEEEE-EC--CHHHHHHH
Confidence 46999999999998887777766 5888887 54 55555444
No 471
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=68.38 E-value=6.4 Score=31.32 Aligned_cols=30 Identities=23% Similarity=0.490 Sum_probs=25.7
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||-|-|. |.||+.+++.|.++ +.+|+++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~-G~~V~~~~r 32 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLAR-GLEVAVLDN 32 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEECC
T ss_pred EEEEEeCCcHHHHHHHHHHHHC-CCEEEEEEC
Confidence 7999999 99999999999987 478877754
No 472
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=68.23 E-value=6.3 Score=35.26 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=24.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcC-----CCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQR-----DDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~-----~~~~vv~Ind 35 (188)
.||||+|+|.+|+.+++.|.+. .+++++.-.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r 91 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLR 91 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeC
Confidence 5899999999999999998876 1366653333
No 473
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=68.17 E-value=6.2 Score=32.37 Aligned_cols=29 Identities=31% Similarity=0.509 Sum_probs=23.0
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCc-eEEEE
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDV-ELVAV 33 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~-~vv~I 33 (188)
||+|.|+ |.||+.++..|..++.+ +++-+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~ 32 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLI 32 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEE
Confidence 8999999 99999999988876533 45444
No 474
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=68.09 E-value=7.7 Score=31.64 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=26.9
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+..|.|+|.|.+|-.++..|.++ +.+|+-+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~ 37 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARK-GYSVHILAR 37 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCEEEEEec
Confidence 46899999999999999988877 478877753
No 475
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=68.01 E-value=11 Score=32.10 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=28.8
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeCCCCChhhhhhh
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVNDPFITTDYMTYM 46 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind~~~~~~~~a~l 46 (188)
-+|.|.|+ |.||...++.+.... .+++++.. +.+.+..+
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~---~~~~~~~~ 261 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVS---SAQKEAAV 261 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEES---SHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC---CHHHHHHH
Confidence 46999999 999999999888774 67777753 34444444
No 476
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=67.82 E-value=6.6 Score=32.88 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=25.9
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|.|.|+|.+|+.+++.+.... .+|+..+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence 58999999999999999998875 57766654
No 477
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=67.78 E-value=7.2 Score=28.92 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=25.5
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+|+-|.|. |.||+.+++.|. + +.+++.+..
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~-g~~V~~~~r 34 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-K-KAEVITAGR 34 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-T-TSEEEEEES
T ss_pred cEEEEEcCCcHHHHHHHHHHH-C-CCeEEEEec
Confidence 58999999 999999999998 6 578777654
No 478
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=67.64 E-value=3.2 Score=34.03 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=25.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|+|.+|...+..+......+|+++.-
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~ 196 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDI 196 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEES
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEEC
Confidence 37999999999998888777665678888754
No 479
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=67.50 E-value=7.2 Score=33.16 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=26.0
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCc--eEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDV--ELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~--~vv~In 34 (188)
..+|+|+|+|..|-..++.|.+.. . +++-+.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G-~~~~V~v~E 38 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEK-AFDQVTLFE 38 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CCSEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHhcC-CCCCeEEEe
Confidence 468999999999999999988774 5 777774
No 480
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=67.14 E-value=6.3 Score=32.54 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=26.9
Q ss_pred cceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+.+|-|-|. |.||+.+++.|.++. .+|+++..
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDN 43 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEe
Confidence 469999999 999999999999874 78888754
No 481
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=67.09 E-value=6.6 Score=32.40 Aligned_cols=31 Identities=16% Similarity=0.117 Sum_probs=25.8
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
..+|.|+|.|..|-.++..|..+ +++++-+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE 41 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHE 41 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEe
Confidence 46899999999999998888877 47776664
No 482
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=67.05 E-value=5.5 Score=33.92 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=27.7
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcC-CCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQR-DDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~-~~~~vv~Ind 35 (188)
|++.+|.|+|.|..|-..++.|.+. ++.+++-+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~ 36 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEA 36 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEEC
Confidence 6668999999999999988888754 4578877754
No 483
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=67.04 E-value=4.9 Score=33.59 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=28.4
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
++.||.|.|.|.+++.++|.+.+. +++++++..
T Consensus 6 ~~~~ilI~g~g~~~~~~~~a~~~~-G~~~v~v~~ 38 (403)
T 4dim_A 6 DNKRLLILGAGRGQLGLYKAAKEL-GIHTIAGTM 38 (403)
T ss_dssp CCCEEEEECCCGGGHHHHHHHHHH-TCEEEEEEC
T ss_pred CCCEEEEECCcHhHHHHHHHHHHC-CCEEEEEcC
Confidence 357999999999999999998887 589999964
No 484
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=66.74 E-value=5.3 Score=31.52 Aligned_cols=29 Identities=24% Similarity=0.325 Sum_probs=25.4
Q ss_pred eEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
||.|.|. |.||+.+++.|. + +.+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-g~~V~~~~r 31 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-VGNLIALDV 31 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-TSEEEEECT
T ss_pred eEEEECCCCHHHHHHHHHhh-c-CCeEEEecc
Confidence 8999999 999999999998 6 588888754
No 485
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=66.72 E-value=5.8 Score=33.34 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=25.2
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind~ 36 (188)
.+++|+|+|.+|+..++.+.....++-+.|.+.
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r 162 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT 162 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 589999999999999988754323655667665
No 486
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=66.38 E-value=7.4 Score=31.78 Aligned_cols=32 Identities=34% Similarity=0.435 Sum_probs=23.6
Q ss_pred ceEEEEc-cCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 4 VKIGING-FGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG-~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
+||+|.| .|.||+.++..|..++.+ +++-+ |.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~-Di 34 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFV-DI 34 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEE-CC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEE-cC
Confidence 3899999 699999999888766533 45444 54
No 487
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=66.22 E-value=6.4 Score=34.30 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=27.2
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|||++|.|.+|..+...|.+. +++|+..+-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeC
Confidence 47999999999999999988887 488877753
No 488
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=66.19 E-value=7.3 Score=30.01 Aligned_cols=34 Identities=24% Similarity=0.221 Sum_probs=27.3
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|+..+|.|+|.|..|-..+..|.++ +.+++-|..
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~ 34 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQ 34 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEec
Confidence 6678999999999999998888877 477766654
No 489
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=66.17 E-value=5.9 Score=32.78 Aligned_cols=31 Identities=26% Similarity=0.245 Sum_probs=24.0
Q ss_pred cceEEEEc-cCHHHHHHHHHHHcCCC-ceEEEE
Q 029788 3 KVKIGING-FGRIGRLVARVILQRDD-VELVAV 33 (188)
Q Consensus 3 ~~~vaInG-~GrIGr~~lr~l~~~~~-~~vv~I 33 (188)
++||+|.| .|.||..++..|.+++. -+++.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~ 40 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLY 40 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEE
Confidence 47999999 59999999988877642 355554
No 490
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=66.05 E-value=5.7 Score=31.97 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=26.3
Q ss_pred CcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 2 GKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 2 ~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|++||+|+|.| .|+.+++++.+. +++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~-G~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDE-GFETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHT-TCCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhC-CCEEEEEEC
Confidence 24799999999 999999999887 488877743
No 491
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=66.02 E-value=5.9 Score=33.64 Aligned_cols=31 Identities=32% Similarity=0.503 Sum_probs=26.6
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.+|.|+|.|..|..++..|..+ +++++-+..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~ 53 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTD 53 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHC-CCeEEEEcC
Confidence 6899999999999999888887 488877764
No 492
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=65.62 E-value=5.7 Score=32.71 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=23.0
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCC-ceEEEE
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDD-VELVAV 33 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~-~~vv~I 33 (188)
+||+|.|+ |.+|..++..|..++- -+++.+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~ 32 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLY 32 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEE
Confidence 38999998 9999999998887642 244444
No 493
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=65.56 E-value=4.5 Score=37.39 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=25.4
Q ss_pred cceEEEEccCHHHHHHHHHHHcCCCceEEEEe
Q 029788 3 KVKIGINGFGRIGRLVARVILQRDDVELVAVN 34 (188)
Q Consensus 3 ~~~vaInG~GrIGr~~lr~l~~~~~~~vv~In 34 (188)
..||||+|+|.+|..+...+... +++|+..+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D 344 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-GTPILMKD 344 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred CCEEEEECCChhhHHHHHHHHhC-CCEEEEEE
Confidence 35899999999999999998877 47766553
No 494
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=65.56 E-value=7.6 Score=32.08 Aligned_cols=33 Identities=27% Similarity=0.423 Sum_probs=26.2
Q ss_pred ceEEEEccCHHHHHHHHHHHc-CCCceEEEEeCCC
Q 029788 4 VKIGINGFGRIGRLVARVILQ-RDDVELVAVNDPF 37 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~-~~~~~vv~Ind~~ 37 (188)
.+++|+|.|.+|+..++++.. ++ ++-+.|.+..
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~-~~~V~v~~r~ 155 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFA-LEAILVHDPY 155 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSC-CCEEEEECTT
T ss_pred cEEEEECccHHHHHHHHHHHHhCC-CcEEEEECCc
Confidence 589999999999999999876 44 6555666654
No 495
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=65.29 E-value=6.4 Score=32.39 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=23.5
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCc-eEEEEeCC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDV-ELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~-~vv~Ind~ 36 (188)
.||+|+|+|.+|..+...+..+.-+ ++ .+-|.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev-~L~Di 47 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRL-VLLDL 47 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEE-EEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEE-EEEcC
Confidence 6999999999999888877765422 44 44454
No 496
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=65.17 E-value=12 Score=30.77 Aligned_cols=30 Identities=7% Similarity=0.172 Sum_probs=22.8
Q ss_pred eEEEE-ccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 5 KIGIN-GFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 5 ~vaIn-G~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
+|-|. |.|.||...++.+.... .+++++..
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~ 197 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEG-FRPIVTVR 197 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT-CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeC
Confidence 45566 55999999999887764 68888764
No 497
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=65.07 E-value=5.2 Score=32.77 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=27.2
Q ss_pred CCcceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 1 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 1 m~~~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
|++..|.|+|.|..|-..+..|..+ +++++-+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E~ 35 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEK 35 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECS
T ss_pred CccCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeC
Confidence 4557899999999999998888877 477766643
No 498
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=64.97 E-value=23 Score=30.93 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=24.7
Q ss_pred ceEEEEccCHHHHH-HHHHHHcCCCceEEEEeCC
Q 029788 4 VKIGINGFGRIGRL-VARVILQRDDVELVAVNDP 36 (188)
Q Consensus 4 ~~vaInG~GrIGr~-~lr~l~~~~~~~vv~Ind~ 36 (188)
.||.++|.|..|.. +++.|.++. .+|. +.|.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G-~~V~-~~D~ 54 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG-YQIS-GSDL 54 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT-CEEE-EECS
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC-CeEE-EEEC
Confidence 58999999999996 789888884 6654 5565
No 499
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=64.72 E-value=7.9 Score=31.39 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=24.9
Q ss_pred ceEEEEcc-CHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGF-GRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~-GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
-+|.|.|. |.||+.+++.+.... .+++++..
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~ 173 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALG-AKLIGTVG 173 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHT-CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeC
Confidence 47999996 999999999888774 67777643
No 500
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=64.71 E-value=8.8 Score=30.64 Aligned_cols=31 Identities=26% Similarity=0.282 Sum_probs=25.8
Q ss_pred ceEEEEccCHHHHHHHHHHHcCCCceEEEEeC
Q 029788 4 VKIGINGFGRIGRLVARVILQRDDVELVAVND 35 (188)
Q Consensus 4 ~~vaInG~GrIGr~~lr~l~~~~~~~vv~Ind 35 (188)
.++.|.|+|.+||.+++.|.+.. .+|+..|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 58999999999999999998885 67665553
Done!